HHsearch alignment for GI: 254780313 and conserved domain: pfam01269
>pfam01269 Fibrillarin Fibrillarin.
Probab=98.11 E-value=3.6e-05 Score=52.88 Aligned_cols=123 Identities=19% Similarity=0.244 Sum_probs=84.7
Q ss_pred CCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCC--------C-CCCCCCEEEECCCCHHHHHHHHHHHCCC
Q ss_conf 313796788850455306899999706878832786411213--------3-3469817830112207999999973138
Q gi|254780313|r 64 ILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILD--------M-EPILGVKFFKFDFLDLDSWEFIRQAIGG 134 (227)
Q Consensus 64 l~k~g~~VlDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~--------~-~~i~gv~~~~gDi~~~~~~~~i~~~l~~ 134 (227)
T Consensus 70 ~i~~gskVLYLGAasGTTVSHvsDIvg~---~G~VyAVE~spr~~RdL~~la~~R~NIvPIl~DAr~P~~Y~~l---v-~ 142 (229)
T pfam01269 70 PIKPGSKVLYLGAASGTTVSHVSDIVGP---EGVVYAVEFSPRVGRELINVAKKRPNIVPILEDARHPQKYRML---V-E 142 (229)
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHCCC---CCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH---C-C
T ss_conf 8589987999447779857678872288---9539999717355789999974279944576677875676542---5-5
Q ss_pred CCCEEEECCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE--EEE--CC-CC----HHHHHHHHHH-HCCEEE
Q ss_conf 87489753202110222101578898999889876411487746999--930--59-99----8999999986-258469
Q gi|254780313|r 135 NPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV--KTF--QG-GT----TNDILCLLKK-HFQKVI 204 (227)
Q Consensus 135 ~~DlVlSDmapn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~--K~F--~G-~~----~~~l~~~l~~-~F~~V~ 204 (227)
T Consensus 143 ~VD~ifqDvaQ-------~~Qa~------i~~~Na~~FLk~gG~~~l~iKA~Sid~t~~p~~vf~~e~~~L~~~~~~~~e 209 (229)
T pfam01269 143 MVDVIFADVAQ-------PDQAR------ILALNAKYFLKNGGYFMISIKARSIDVTKEPEEVFAREVEKLKEEGFKPKE 209 (229)
T ss_pred CCCEEEECCCC-------HHHHH------HHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 66689962787-------77899------999999986126988999997134216789899999999999876996589
Q ss_pred EE
Q ss_conf 97
Q gi|254780313|r 205 HV 206 (227)
Q Consensus 205 ~~ 206 (227)
T Consensus 210 ~i 211 (229)
T pfam01269 210 QV 211 (229)
T ss_pred EE
T ss_conf 98