HHsearch alignment for GI: 254780313 and conserved domain: pfam08241

Probab=98.13  E-value=3.8e-06  Score=59.00  Aligned_cols=87  Identities=24%  Similarity=0.316  Sum_probs=59.8

Q ss_pred             EEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCC--------CCCCCCEEEECCCCHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf             88504553068999997068788327864112133--------3469817830112207999999973138874897532
Q gi|254780313|r   72 VDLGSSPGSWSQVAARITGSNANNTRVVAIDILDM--------EPILGVKFFKFDFLDLDSWEFIRQAIGGNPDLVLSDM  143 (227)
Q Consensus        72 lDLGaaPGgWsQva~~~~~~~~~~~~VigVDl~~~--------~~i~gv~~~~gDi~~~~~~~~i~~~l~~~~DlVlSDm  143 (227)
T Consensus         1 LDiGcG~G~~~~~l~~~~-----~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~d~~~~~-------~~~~~fD~I~~~~   68 (95)
T pfam08241         1 LDVGCGTGLLTEALARLP-----GAQVTGVDLSPEMLALARKRAQEDGLTFVVGDAEDLP-------FPDESFDVVVSSL   68 (95)
T ss_pred             CCCCCCCCHHHHHHHHCC-----CCEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCC-------CCCCCCCEEEECC
T ss_conf             964624999999998457-----9999999497899877663102669479980332467-------5545685999833


Q ss_pred             CHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             02110222101578898999889876411487746999
Q gi|254780313|r  144 AYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGDFLV  181 (227)
Q Consensus       144 apn~SG~~~~D~~~~~~L~~~al~~A~~~Lk~gG~fV~  181 (227)
T Consensus        69 ~l~~~----~~-------~~~~l~~~~r~LkpgG~l~i   95 (95)
T pfam08241        69 VLHHL----PD-------PERALREIARVLKPGGKLVI   95 (95)
T ss_pred             CHHHC----CC-------HHHHHHHHHHHCCCCEEEEC
T ss_conf             06646----89-------99999999987786949979