BLAST/PSIBLAST alignment of GI: 254780313 and GI: 227820952 at iteration 1

>gi|227820952|ref|YP_002824922.1| putative ribosomal RNA large subunit methyltransferase J [Sinorhizobium fredii NGR234] Length = 245
>gi|254809557|sp|C3MGQ4|RLME_RHISN RecName: Full=Ribosomal RNA large subunit methyltransferase E; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2'-O-)-methyltransferase Length = 245
>gi|227339951|gb|ACP24169.1| putative ribosomal RNA large subunit methyltransferase J [Sinorhizobium fredii NGR234] Length = 245

 Score =  304 bits (779), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 144/228 (63%), Positives = 179/228 (78%), Gaps = 2/228 (0%)

Query: 1   MVKPP--GSSSRRGLTQKVKNRSCQGSSRDWLNRHINDPYVQRAQLEGWRARSAYKLLQI 58
           M K P  G+ S R L QKVK    + SSR WL RHINDPYVQRAQLEG+RAR+A+KLL+I
Sbjct: 1   MTKSPIGGNRSGRKLGQKVKKGKLKASSRRWLERHINDPYVQRAQLEGYRARAAFKLLEI 60

Query: 59  NEKHQILQSNRRIVDLGSSPGSWSQVAARITGSNANNTRVVAIDILDMEPILGVKFFKFD 118
           +EKH+IL   RRI+DLG++PGSWSQ+AA++T S   + RV AID L+M+PI GV+F + D
Sbjct: 61  DEKHKILAGARRIIDLGAAPGSWSQIAAKVTNSTDADPRVAAIDFLEMDPIPGVRFLQLD 120

Query: 119 FLDLDSWEFIRQAIGGNPDLVLSDMAYPTIGHRKIDHLRTMSLCEAATFFALEMLNIGGD 178
           FLD ++ E +++AIGG PDLVLSDMA PT GHR+ DHLRTM LCE A  FA+++L  GG 
Sbjct: 121 FLDPEAPEKLKEAIGGTPDLVLSDMAAPTTGHRQTDHLRTMHLCEVAAHFAVDVLAKGGH 180

Query: 179 FLVKTFQGGTTNDILCLLKKHFQKVIHVKPVASRAESVEMFLLAKGFR 226
           FL KTFQGGT  D+L +LK++F +VIHVKP +SR ESVEMFLLAKGF+
Sbjct: 181 FLAKTFQGGTERDLLNMLKQNFSQVIHVKPASSRTESVEMFLLAKGFK 228