HHsearch alignment for GI: 254780314 and conserved domain: COG3203
>COG3203 OmpC Outer membrane protein (porin) [Cell envelope biogenesis, outer membrane].
Probab=94.41 E-value=0.41 Score=26.81 Aligned_cols=224 Identities=19% Similarity=0.202 Sum_probs=117.6
Q ss_pred CEEEEEEEEEECCCCEEEEEEEEEEC--CCHHCCCCCCCCHHEEEEECCCCCCCHHHHEEEHHH-----EEECCEEE---
Q ss_conf 20001489970568613499999742--200000011121000121035555112520001100-----00012220---
Q gi|254780314|r 84 IPVKGNLEVNANAGDVTGVAKLKLAV--DDVLSMQFAESDVRALAFTVPSSKLSVEELSLSMKG-----ARLGYYKS--- 153 (351)
Q Consensus 84 ~~~~g~~~~~a~~g~~tgv~~~~~~~--d~~~~~~~~~~d~~a~~~~~~Ss~l~ldeayLdi~G-----fRaG~FyS--- 153 (351)
T Consensus 59 ~GfkG~edlg---~gl~a~~~lE~~f~~~~g------~~~~--------~~~l~~R~afvGL~~~~~Gslt~GRq~~~~~ 121 (354)
T COG3203 59 FGFKGETQIG---DGLTGYGQLESGFQANNG------ESNQ--------GGRLFTRLAFAGLKGADFGSLDYGRNYGVLY 121 (354)
T ss_pred EEEEEEEECC---CCEEEEEEEEEEEECCCC------CCCC--------CCCCCCEEEEEECCCCCCEEEEECCCCCCCE
T ss_conf 9888888728---960799999974515877------5456--------8765332689860568711485433465414
Q ss_pred ----ECCCCCCCCCCEE-EECCCCCCCCCCEEEEEE-ECCCEEEEEEHHHCCC--CCCC-CE-EEEEEEEEEEECCEEEE
Q ss_conf ----0244445555102-311222444332268998-2575451033032146--6665-40-34788963454126899
Q gi|254780314|r 154 ----WSDEVNPVYSPTT-LYNDARGLDKMMSLSYRH-SFGLLKAGLSTDLLQK--DGLK-QV-LGIGYMASYAIGKIRST 223 (351)
Q Consensus 154 ----WWDEtddIgS~~T-L~Nd~rg~dk~~SirYqY-e~G~F~AGiSvDeLE~--dg~~-n~-VGV~g~vsg~aGavS~q 223 (351)
T Consensus 122 Dv~~~~d~~~~~g~~~~~~~~~~~~~r~~n~v~Y~~~~f~Gl~~g~~y~f~~~~~~~~~~~g~~~~s~~~~y~~G~~~~~ 201 (354)
T COG3203 122 DVAGWTDPLPEFGGDATLVDDNFMTGRADNVATYRNPDFGGLVDGLNYAFQYQGRPGKRKNGDFGYSATYDYGNGDFGLG 201 (354)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHCCCCCCEEEEEEECCCCEEHH
T ss_conf 35343356633477531034643456657558982775566888689984356632441278753358999546757120
Q ss_pred EEEEEECC-------------CCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCC---------CEEEEEEEEEEEC
Q ss_conf 98522114-------------6651279888613678820246788733864000112---------1136643556311
Q gi|254780314|r 224 VTGGYDAG-------------TNNVAIRANISSPVSRAGTLDCGAVWASGDNSYYDKS---------KYSVFAGYKFDVA 281 (351)
Q Consensus 224 ltGGyDtd-------------~eeGAIRAl~ta~iG~PGTlglAgVwASgpNaYY~~S---------EWaVAAeYaikaT 281 (351)
T Consensus 202 aay~~~~~~~~~~~~~~~~~~~~~~~~~~G~~y~~g-~~~--l~a~Y~~~~~~~~~~~~~~~~~~~~~~~~~a~Y~~~~~ 278 (354)
T COG3203 202 AAYDSSRRTNDQNSGLSNASGDKAEAWTVGAKYDAG-NAY--LAAGYAETRNATPTGAAPGFANKTQNIEVGAQYQFTFG 278 (354)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECC-CEE--EEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCC
T ss_conf 245565056554455456675310058666698327-011--32123345426654565433555540899999976877
Q ss_pred EEEEECCCEEEE--CCCC--CCCCCEEEEEEEEEEEEECCCEEEEEEEECCC
Q ss_conf 047860452540--4567--67852277877888885159127789873274
Q gi|254780314|r 282 KSITISGGGQYF--GDIN--KTGKDGWSAGISAKYMISSGLEAQASVAFNDN 329 (351)
Q Consensus 282 DKl~ITPG~QY~--gd~~--~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~ 329 (351)
T Consensus 279 l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ga~Y~fsKrt~~Yv~y~~~~~ 328 (354)
T COG3203 279 LRL--SGAYYYSKGKDLNGVTDKDLVKYVDVGATYYFSKNTSTYVDYGINLL 328 (354)
T ss_pred CEE--EEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEEC
T ss_conf 215--78777530212235578876059995017998047248999888741