HHsearch results for GI: 254780314 and protein with PDBid: 3prn_A

>3prn_A Porin; integral membrane protein, pore eyelet mutant; HET: C8E; 1.90A {Rhodobacter blasticus} SCOP: f.4.3.1 PDB: 1bh3_A* 1prn_A* 7prn_A* 6prn_A* 5prn_A* 2prn_A* 8prn_A* 1h6s_1
Probab=97.30  E-value=0.0092  Score=35.76  Aligned_cols=153  Identities=13%  Similarity=0.082  Sum_probs=95.0

Q ss_pred             CEEEEEEECCCEEEEEEHHHCCCCCCC--CEEEEEEEEEEEECCEEEEEEEEEECCCC----CCEEEEEEEECCCCCCEE
Q ss_conf             226899825754510330321466665--40347889634541268999852211466----512798886136788202
Q gi|254780314|r  178 MSLSYRHSFGLLKAGLSTDLLQKDGLK--QVLGIGYMASYAIGKIRSTVTGGYDAGTN----NVAIRANISSPVSRAGTL  251 (351)
Q Consensus       178 ~SirYqYe~G~F~AGiSvDeLE~dg~~--n~VGV~g~vsg~aGavS~qltGGyDtd~e----eGAIRAl~ta~iG~PGTl  251 (351)
                      ..+.|.++.+.|+.+++-..-+.++..  +...+...+.+..+++.  +...|+....    .-..+..+...   .+.+
T Consensus       131 ~~~~~s~~~~Gf~~~~~y~~~~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~y~~~~~~~~~~~~~~~~~~y~---~~~~  205 (289)
T 3prn_A          131 NGIAVTYSISGVNLYLSYVDPDQTVDSSLVTEEFGIAADWSNDMIS--LAAAYTTDAGGIVDNDIAFVGAAYK---FNDA  205 (289)
T ss_dssp             EEEEEEEECSSEEEEEEEEETTTTSCGGGSCCEEEEEEEEECSSEE--EEEEEEESGGGCTTCCEEEEEEEEC---CSSS
T ss_pred             CEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEE--EEEEEEECCCCCCCCCEEEEEEEEE---CCCE
T ss_conf             1699652237710010021036666667756279999991168678--9999985057765542389989997---0643


Q ss_pred             EEEEEEECCCCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf             46788733864000112113664355631104786045254045676785227787788888515912778987327421
Q gi|254780314|r  252 DCGAVWASGDNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASVAFNDNFV  331 (351)
Q Consensus       252 glAgVwASgpNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~  331 (351)
                      .+++.+......=.+...|.+.+.|.+.+   +  +..++|-..-..  .+.-..+|.++|++..++...+++++.|.  
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~y~~g~---~--~~~~~y~~~~~~--~~~~~~~~g~~Y~l~~~~~l~a~~~~~~~--  276 (289)
T 3prn_A          206 GTVGLNWYDNGLSTAGDQVTLYGNYAFGA---T--TVRAYVSDIDRA--GADTAYGIGADYQFAEGVKVSGSVQSGFA--  276 (289)
T ss_dssp             EEEEEEEEECTTSTTCSEEEEEEEEEETT---E--EEEEEEEEECST--TCCCEEEEEEEEEEETTEEEEEEEEECTT--
T ss_pred             EEEEEEEEECCCCCCCEEEEEEEEEEECC---E--EEEEEEEECCCC--CCCCEEEEEEEEECCCCEEEEEEEEEECC--
T ss_conf             68999997214677502699877898377---7--899999860677--66448999999976999799999999538--


Q ss_pred             CCCCCCCCCCCCCCCHHCCC
Q ss_conf             13542346631001101139
Q gi|254780314|r  332 KKGVAIDKGVDLSVGLKKSF  351 (351)
Q Consensus       332 ~~~~~~d~g~d~t~gl~~sf  351 (351)
                            |+ .....|+.-+|
T Consensus       277 ------d~-t~~~~Gv~~~F  289 (289)
T 3prn_A          277 ------NE-TVADVGVRFDF  289 (289)
T ss_dssp             ------CC-EEEEEEEEEEC
T ss_pred             ------CC-CCEEEEEEEEC
T ss_conf             ------98-53603778889