HHsearch results for GI: 254780314 and protein with PDBid: 3prn_A
>3prn_A Porin; integral membrane protein, pore eyelet mutant; HET: C8E; 1.90A {Rhodobacter blasticus} SCOP: f.4.3.1 PDB: 1bh3_A* 1prn_A* 7prn_A* 6prn_A* 5prn_A* 2prn_A* 8prn_A* 1h6s_1
Probab=97.30 E-value=0.0092 Score=35.76 Aligned_cols=153 Identities=13% Similarity=0.082 Sum_probs=95.0
Q ss_pred CEEEEEEECCCEEEEEEHHHCCCCCCC--CEEEEEEEEEEEECCEEEEEEEEEECCCC----CCEEEEEEEECCCCCCEE
Q ss_conf 226899825754510330321466665--40347889634541268999852211466----512798886136788202
Q gi|254780314|r 178 MSLSYRHSFGLLKAGLSTDLLQKDGLK--QVLGIGYMASYAIGKIRSTVTGGYDAGTN----NVAIRANISSPVSRAGTL 251 (351)
Q Consensus 178 ~SirYqYe~G~F~AGiSvDeLE~dg~~--n~VGV~g~vsg~aGavS~qltGGyDtd~e----eGAIRAl~ta~iG~PGTl 251 (351)
..+.|.++.+.|+.+++-..-+.++.. +...+...+.+..+++. +...|+.... .-..+..+... .+.+
T Consensus 131 ~~~~~s~~~~Gf~~~~~y~~~~~~~~~~~~~~~~~~~~~y~~~~~~--~~~~y~~~~~~~~~~~~~~~~~~y~---~~~~ 205 (289)
T 3prn_A 131 NGIAVTYSISGVNLYLSYVDPDQTVDSSLVTEEFGIAADWSNDMIS--LAAAYTTDAGGIVDNDIAFVGAAYK---FNDA 205 (289)
T ss_dssp EEEEEEEECSSEEEEEEEEETTTTSCGGGSCCEEEEEEEEECSSEE--EEEEEEESGGGCTTCCEEEEEEEEC---CSSS
T ss_pred CEEEECCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCEE--EEEEEEECCCCCCCCCEEEEEEEEE---CCCE
T ss_conf 1699652237710010021036666667756279999991168678--9999985057765542389989997---0643
Q ss_pred EEEEEEECCCCCCCCCCCEEEEEEEEEEECEEEEECCCEEEECCCCCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCC
Q ss_conf 46788733864000112113664355631104786045254045676785227787788888515912778987327421
Q gi|254780314|r 252 DCGAVWASGDNSYYDKSKYSVFAGYKFDVAKSITISGGGQYFGDINKTGKDGWSAGISAKYMISSGLEAQASVAFNDNFV 331 (351)
Q Consensus 252 glAgVwASgpNaYY~~SEWaVAAeYaikaTDKl~ITPG~QY~gd~~~sg~DaWk~GlTvDYqItegL~tK~SVqY~D~~~ 331 (351)
.+++.+......=.+...|.+.+.|.+.+ + +..++|-..-.. .+.-..+|.++|++..++...+++++.|.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~y~~g~---~--~~~~~y~~~~~~--~~~~~~~~g~~Y~l~~~~~l~a~~~~~~~-- 276 (289)
T 3prn_A 206 GTVGLNWYDNGLSTAGDQVTLYGNYAFGA---T--TVRAYVSDIDRA--GADTAYGIGADYQFAEGVKVSGSVQSGFA-- 276 (289)
T ss_dssp EEEEEEEEECTTSTTCSEEEEEEEEEETT---E--EEEEEEEEECST--TCCCEEEEEEEEEEETTEEEEEEEEECTT--
T ss_pred EEEEEEEEECCCCCCCEEEEEEEEEEECC---E--EEEEEEEECCCC--CCCCEEEEEEEEECCCCEEEEEEEEEECC--
T ss_conf 68999997214677502699877898377---7--899999860677--66448999999976999799999999538--
Q ss_pred CCCCCCCCCCCCCCCHHCCC
Q ss_conf 13542346631001101139
Q gi|254780314|r 332 KKGVAIDKGVDLSVGLKKSF 351 (351)
Q Consensus 332 ~~~~~~d~g~d~t~gl~~sf 351 (351)
|+ .....|+.-+|
T Consensus 277 ------d~-t~~~~Gv~~~F 289 (289)
T 3prn_A 277 ------NE-TVADVGVRFDF 289 (289)
T ss_dssp ------CC-EEEEEEEEEEC
T ss_pred ------CC-CCEEEEEEEEC
T ss_conf ------98-53603778889