HHsearch alignment for GI: 254780316 and conserved domain: PRK00488
>PRK00488 pheS phenylalanyl-tRNA synthetase subunit alpha; Validated.
Probab=98.35 E-value=1.4e-05 Score=58.76 Aligned_cols=186 Identities=15% Similarity=0.191 Sum_probs=120.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH--HHH-HHHHH-------CCCCCCCCCCCCCCCCHHHCHHHHH
Q ss_conf 7899889546789887877877402321004825765--520-00000-------0024677643210151221106776
Q gi|254780316|r 486 RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFG-GGQRE-------LEILNPISADMSNMRTSLLPGLLKA 555 (805)
Q Consensus 486 ~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~--~~~-~~~~~-------i~l~NPlS~e~s~lR~SLlp~LL~~ 555 (805)
T Consensus 104 G~~HPit~~~~ei~~iF~~~Gf~v-~~GpeiE~~~~NFdaLn~P~~HPAR~~~DTFy~-----~~~~lLRTHTS~~qir~ 177 (338)
T PRK00488 104 GGLHPLTRTIERIEDIFVGLGFEV-AEGPEIEDDYYNFEALNIPKDHPARDMQDTFYI-----DDRLLLRTHTSPVQIRT 177 (338)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCEE-ECCCCEEEHHHHHHHHCCCCCCCCCCCCCEEEE-----CCCCEECCCCCHHHHHH
T ss_conf 664769999999999999869769-618831004546887569978854364662897-----68713435687888999
Q ss_pred HHHHCCCCCCHHHHHHHCCCCCCCCCCC-CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 4321015861134543024444777544-310002210354310124620234544333314688875311111110145
Q gi|254780316|r 556 TGRNVDRAIADFAIFEVSHVYENDTPEG-QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 (805)
Q Consensus 556 ~~~N~~r~~~~i~lFEiG~Vf~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~ 634 (805)
T Consensus 178 m~~----~~pp~~~i~~GrvyR~d~~DatH~~~FhQ~E---------gl~-------vd~~it~~~Lk~~l~~f~~~~fg 237 (338)
T PRK00488 178 MEK----QKPPIRIIAPGRVYRNDSDDATHSPMFHQVE---------GLV-------VDKNISFADLKGTLEDFLKAFFG 237 (338)
T ss_pred HHH----CCCCEEEEECCCCCCCCCCCCCCCEEEEEEE---------EEE-------EECCCCHHHHHHHHHHHHHHHCC
T ss_conf 972----6998699952663158999875350466400---------589-------71788799999999999999728
Q ss_pred -CCCEEEECCCCCCCCCCCEEEEEE------------CCE-EEEEEEEEECHHHHHHCCCCCC---EEEEEEEHHHHHHH
Q ss_conf -333033058865678981699998------------792-9999985477899996687997---89999878762354
Q gi|254780316|r 635 -LDSLRFESGAPSWYHPGRSGIIKT------------SAE-IVLGYFGEFHPNILDFFGLSNP---ICGFEVYLDSIPIS 697 (805)
Q Consensus 635 -~~~~~~~~~~~~~~hPgrsa~I~~------------~gk-~iiG~iG~ihP~i~~~~~i~~~---v~~~EI~ld~L~~~ 697 (805)
T Consensus 238 ~~~~~R~rpsyFPFtEPs~Evdi~~~~~~g~gc~~~~~~~WlEi~G~Gmv~p~Vl~~~gid~~~~~G~AfG~GieR~aMl 317 (338)
T PRK00488 238 EDLKIRFRPSYFPFTEPSAEVDVSCFNCKGKGCRVCKNTGWLEVLGCGMVHPNVLRNVGIDPEEYSGFAFGMGIERLAML 317 (338)
T ss_pred CCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHCCCCCCCCEEEEEEECHHHHHHH
T ss_conf 76647754788999998534788731457766544789963897376667889998669995527599875158899999