HHsearch alignment for GI: 254780316 and conserved domain: pfam01409
>pfam01409 tRNA-synt_2d tRNA synthetases class II core domain (F). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain.
Probab=99.02 E-value=9.7e-09 Score=81.22 Aligned_cols=191 Identities=17% Similarity=0.206 Sum_probs=134.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH-HHHH-HH-------HHHCCCCCCCCCCCCCCCCHHHCHHHHH
Q ss_conf 6789988954678988787787740232100482576-5520-00-------0000024677643210151221106776
Q gi|254780316|r 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS-VLFG-GG-------QRELEILNPISADMSNMRTSLLPGLLKA 555 (805)
Q Consensus 485 ~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~-~~~~-~~-------~~~i~l~NPlS~e~s~lR~SLlp~LL~~ 555 (805)
T Consensus 13 ~G~~HPi~~~~~~i~~~f~~~GF~~~~g~eves~~~NFDaLn~P~dHPaR~~~DTfy~~~~~~~~~~vLRtHTS~~q~r~ 92 (243)
T pfam01409 13 PGGLHPLTRVLEEIRDIFLSMGFEEVEGPEVESDFYNFDALNIPQDHPARDMQDTFYLKKPLKARRLLLRTHTTPVQART 92 (243)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHH
T ss_conf 99858599999999999987798687698356427777755789889876767603433666676865768798899999
Q ss_pred HHHHCCCCCCHHHHHHHCCCCCCCCCCCCC----EEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 432101586113454302444477754431----0002210354310124620234544333314688875311111110
Q gi|254780316|r 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQK----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 (805)
Q Consensus 556 ~~~N~~r~~~~i~lFEiG~Vf~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~ 631 (805)
T Consensus 93 l~~~---~~~p~r~~~~grvyR~d~~DatH~~~FhQ~Eg~v-------------------vd~~it~~~Lk~~l~~~~~~ 150 (243)
T pfam01409 93 LAEK---NKPPIKIFSIGRVFRRDQVDATHLPEFHQVEGLV-------------------VDENVSFADLKGVLEEFLRK 150 (243)
T ss_pred HHHC---CCCCEEEECCCEEEECCCCCCCCCCEEEEEEEEE-------------------ECCCCCHHHHHHHHHHHHHH
T ss_conf 9742---7998489814313325889843153105755789-------------------65777899999999999999
Q ss_pred CC-CCCCEEEECCCCCCCCCCCEEEEEE--CCE-EEEEEEEEECHHHHHHCCCC--CCEEEEEEEHHHHHHH
Q ss_conf 14-5333033058865678981699998--792-99999854778999966879--9789999878762354
Q gi|254780316|r 632 FV-SLDSLRFESGAPSWYHPGRSGIIKT--SAE-IVLGYFGEFHPNILDFFGLS--NPICGFEVYLDSIPIS 697 (805)
Q Consensus 632 l~-~~~~~~~~~~~~~~~hPgrsa~I~~--~gk-~iiG~iG~ihP~i~~~~~i~--~~v~~~EI~ld~L~~~ 697 (805)
T Consensus 151 lfg~~~~~R~rp~yFPFTePS~Evdv~~~~~~~WlEi~G~Gmv~p~vl~~~gid~~~~g~AfG~GlERlaMl 222 (243)
T pfam01409 151 FFGFEVKVRFRPSYFPFTEPSAEVDVYCCKGGGWIEIGGAGMVHPNVLEAVGIDEDYPGFAFGLGVERLAML 222 (243)
T ss_pred HCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEEEECHHHHHHH
T ss_conf 739973798678869999986179999964997258750366678899866989897699985348899999