HHsearch alignment for GI: 254780316 and conserved domain: pfam03147
>pfam03147 FDX-ACB Ferredoxin-fold anticodon binding domain. This is the anticodon binding domain found in some phenylalanyl tRNA synthetases. The domain has a ferredoxin fold.
Probab=99.92 E-value=1.8e-24 Score=192.86 Aligned_cols=93 Identities=39% Similarity=0.735 Sum_probs=90.7
Q ss_pred CCCCCCEEEEEEEECCCCCHHHHHHHHHHCC-CCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH
Q ss_conf 9888720018999668879999999997111-003576989876367799884269999998477988899999999999
Q gi|254780316|r 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 (805)
Q Consensus 711 s~fP~v~RDls~iv~~~v~~~~I~~~i~~~~-~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~EI~~i~~~ 789 (805)
T Consensus 1 SkfP~v~RDlS~~v~~~~~~~~i~~~i~~~~~~~l~~v~lfDvy~~~~i~~~kkSl~~r~~~qs~~kTLtd~eI~~~~~~ 80 (94)
T pfam03147 1 SKFPAVRRDLAFVVDEDVPAADILDVIRKAGGELLEDVELFDVYRGKKIPEGKKSLAFRLTFQSAERTLTDEEVNAIHEK 80 (94)
T ss_pred CCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHH
T ss_conf 95988223089998898989999999986093707899999896399989997899999999999988799999999999
Q ss_pred HHHHHHHHHCCEEC
Q ss_conf 99999999511981
Q gi|254780316|r 790 IVENVVKKTNAVLR 803 (805)
Q Consensus 790 ii~~l~~k~ga~LR 803 (805)
T Consensus 81 ii~~l~~k~~~~lR 94 (94)
T pfam03147 81 IVKALEKKFGAELR 94 (94)
T ss_pred HHHHHHHHHCCEEC
T ss_conf 99999998591869