HHsearch results for GI: 254780316 and protein with PDBid: 2cwp_A
>2cwp_A Metrs related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii}
Probab=99.72 E-value=1.7e-18 Score=148.93 Aligned_cols=109 Identities=22% Similarity=0.295 Sum_probs=79.1
Q ss_pred HCCCEEEEEECCCCCCCEEEEEEEEEEECCCCC-CCEEEEECCCCCEEEEECCCCCC-CCCCEEEEECCCCEECCCCEEE
Q ss_conf 458604211124656874899999975657998-70899975999579897548345-5897898966877925898398
Q gi|254780316|r 27 SIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNV-RVGLLGVWAPPGSCIPENNMIV 104 (805)
Q Consensus 27 ~~G~EVe~i~~~~~~~~vvvg~v~~~~~hP~ad-l~v~~Vd~g~~~~~~IvcgA~Nv-~~g~~V~~A~~Ga~lp~g~~~i 104 (805)
|.++|+.+++.+..++ ++||+|+++++||+|| |++|+||+|+ +.+|||||+.+. .+. .++|.++. .-..+
T Consensus 1 m~~~e~i~~ddF~klD-irVG~I~~v~~hp~adkL~~~~Vd~G~-~~r~iv~gi~~~~~~e-----~l~Gk~vv-~v~Nl 72 (112)
T 2cwp_A 1 MNYMELYDVDEFWKFQ-MKVGLVKKAEKIKRTKKLIKLIVDFGN-EERTIVTGIADQIPPE-----ELEGKKFI-FVVNL 72 (112)
T ss_dssp ---CCCCCHHHHHTSC-EEEEEEEEEEECTTCSSCEEEEEECSS-CEEEEEECCTTTSCGG-----GTTTCEEE-EECSS
T ss_pred CCCCCEECHHHCCEEE-EEEEEEEEEEECCCCCCCEEEEEECCC-CCEEEEEEEHHHCCCC-----CCCCCEEE-EECCC
T ss_conf 9863274764600141-799999997768998715799997279-8077746410342962-----00697899-87587
Q ss_pred EEEHHCCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCH
Q ss_conf 331205865054541188769985477507816888888455
Q gi|254780316|r 105 NVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 (805)
Q Consensus 105 ~~~~irGv~S~GMlCS~~ELgl~~~~~gI~~l~~~~~~G~~~ 146 (805)
|++||||++|+||+|+..+ .+....++..|+++++|+.+
T Consensus 73 kp~kirGv~SeGMil~~~~---~~g~~~ll~~~~~~~~G~~v 111 (112)
T 2cwp_A 73 KPKKFSGVESQGMLILAET---EDGKVYLIPVPEEVPVGARV 111 (112)
T ss_dssp CCEEETTEEECSEECCEEC---TTSCEECCBCCTTSCTTCEE
T ss_pred CCCCCCCEECCEEEEEEEC---CCCEEEEECCCCCCCCCCCC
T ss_conf 8511888133449998876---99969996499999898703