HHsearch results for GI: 254780316 and protein with PDBid: 2odr_B
>2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=100.00 E-value=0 Score=460.37 Aligned_cols=406 Identities=13% Similarity=0.090 Sum_probs=310.1
Q ss_pred HHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHCC----CCCHH
Q ss_conf 87616540155441345530135889998887521233455565258741355431000043113333113----45878
Q gi|254780316|r 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI----DVPIE 422 (805)
Q Consensus 347 ar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~~~~~~~~~~~~~~~~I~l~~~~i~~ilG~----~i~~~ 422 (805)
-..+||+||||+|||||+|++++..+++||..+..+++++... ..+..+.....|. ....+
T Consensus 8 ~~s~Gl~~d~ShrFer~~~~ela~ka~ErA~~~~~~i~~~~~i---------------d~~lPr~~~~~Gk~HPl~~~ie 72 (648)
T 2odr_B 8 HHSSGLVPRGSHMFKREEIIEMANKDFEKAWIETKDLIKAKKI---------------NESYPRIKPVFGKTHPVNDTIE 72 (648)
T ss_dssp ------------------------------------------C---------------TTSGGGCCCCCCBCCHHHHHHH
T ss_pred CCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---------------CCCCCCCCCCCCCCCCHHHHHH
T ss_conf 4357878305522013456776699999999964443067756---------------5458988877767283899999
Q ss_pred HHHHHHHHHHHHHHCCC---CCCEEE---ECCCCC---C-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99999998402221034---562366---403454---3-3440256767676535233466765544345767899889
Q gi|254780316|r 423 DSLRILERLGFSVIGEY---DKFEVS---VPSWRQ---D-VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 (805)
Q Consensus 423 ei~~iL~~Lgf~v~~~~---~~~~V~---vPs~R~---D-I~~e~DLiEEIaRiyGYdnIp~~~l~~~~~~~~~~~~~~~ 492 (805)
++.++|.+|||+..... +.|.+. +|+||+ | +..+.|++|||+|+|||||||+..+... . ........+
T Consensus 73 eIr~IL~rLGFee~~~p~Iv~~wnfD~LfvP~~HPaRDDtFyLe~DliEEVaRiyGYdnip~~~p~~~-~-~~~~~~~~~ 150 (648)
T 2odr_B 73 NLRQAYLRMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEKISQIEKLGIKV-S-EHKESLQKI 150 (648)
T ss_dssp HHHHHHHHTTCEECCCCSEEEHHHHHHHHGGGHHHHHHTCEEEEBCCC--------------------------------
T ss_pred HHHHHHHHCCCEEEECCEEEEEEECCCCCCCCCCCHHHCCEEECCCCHHHHHCCCCCCCCCCCCCCCC-C-CCCCHHHHH
T ss_conf 99999997798797488373535053106898774420735214763123202245223431245555-4-531013566
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54678988787787740232100482576552000000002467764321015122110677643210158611345430
Q gi|254780316|r 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 (805)
Q Consensus 493 ~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~i~lFEi 572 (805)
...+++++.+.+.||+|++||||++++....+.....++.+.||+++++++|||+++|||+.++++|++|+.+++++||+
T Consensus 151 ~~~~k~r~~l~~~G~~Evitysfv~~~~~~~~~~~~~~v~l~NPisSe~~vLRTh~~~gll~~l~~n~~r~~~pirlFEi 230 (648)
T 2odr_B 151 LHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSI 230 (648)
T ss_dssp ---------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCSCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 66655302222034000321023463443202565552113585532355658877468999999998579998389987
Q ss_pred CCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCEEEECCCCCCCCCC
Q ss_conf 244447775443100022103543101246202345443333146888753111111101453-3303305886567898
Q gi|254780316|r 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL-DSLRFESGAPSWYHPG 651 (805)
Q Consensus 573 G~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~-~~~~~~~~~~~~~hPg 651 (805)
|+||+++....+.+.....+. .| | --...+|||++||.+++++..++.. ..+++.+...+++|||
T Consensus 231 GrVFR~D~~~D~tH~~~fhQl-------eG------l-ivg~~vdf~dLKg~le~lL~~Lg~~~~k~r~~~s~~Pf~hPg 296 (648)
T 2odr_B 231 DRCFRREQKEDKSHLMTYHSA-------SC------A-IAGEGVDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPE 296 (648)
T ss_dssp EEEECCCSCCCSSCCSEEEEE-------EE------E-EECTTCCHHHHHHHHHHHHHTTTCCCEEEEECTTCCTTBCTT
T ss_pred EEEECCCCCCCCCCCCCEEEE-------EE------E-EECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
T ss_conf 778737874424357620047-------89------9-977876889999999999999678873899656778998991
Q ss_pred CEEEEEECC----EEE-EEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCC--CCCCCCCCCCCCEEEEEEEE
Q ss_conf 169999879----299-99985477899996687997899998787623545202456--63136898887200189996
Q gi|254780316|r 652 RSGIIKTSA----EIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT--KKVVHLSSLHPVKRDLAFIV 724 (805)
Q Consensus 652 rsa~I~~~g----k~i-iG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~--~~~~~~s~fP~v~RDls~iv 724 (805)
++++|++.+ +.+ +|.+|++||.+++++||+.++++|++.+|.|.......... ..+..++.++.+.||+|+.+
T Consensus 297 ~ea~V~~~~~~~~~WlEIgg~G~vHP~VLk~~GId~~V~AFGLGLERLAMlk~gi~DIR~l~~p~f~~~~~s~rdlA~~v 376 (648)
T 2odr_B 297 TQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRNVASMV 376 (648)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEEBCHHHHHHTTCCSCEEEEEEEHHHHHHHHTTCSCHHHHHCGGGSCCCCCHHHHHTTE
T ss_pred EEEEEEEEECCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHC
T ss_conf 15899998167984899980653179999866969857999963899999873997377760777578885665654422
Q ss_pred --CCCCCHHHHHHHHHH----CCC--CEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHH
Q ss_conf --688799999999971----110--03576989876367799884269999998477988899999
Q gi|254780316|r 725 --DQHIPAGTLVNIIKN----VDR--LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 (805)
Q Consensus 725 --~~~v~~~~I~~~i~~----~~~--ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~EI 783 (805)
++...+.++..++++ +.+ -.+++.+||+|+|+++++||||++++++.++.++||.+..+
T Consensus 377 ~ldk~p~~~e~~~i~~~i~~~~~~~~~~~s~~~Fdvyeg~~~g~~kKsv~v~v~~~~enk~L~g~~~ 443 (648)
T 2odr_B 377 KLDKVPVMDEIYDLTKELIESCVKNKDLKSPCELAIEKTFSFGKTKKNVKINIFEKEEGKNLLGPSI 443 (648)
T ss_dssp EESCCCSSHHHHHHHHHHHHHHHHC----------------------------------------CC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCHHH
T ss_conf 4366864176899999999999863887887078875451479985289999993168876669568