HHsearch results for GI: 254780316 and protein with PDBid: 2rhq_B
>2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B*
Probab=100.00 E-value=0 Score=1714.77 Aligned_cols=781 Identities=28% Similarity=0.480 Sum_probs=723.2
Q ss_pred CCCCHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEECCC-CCCCEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEECCC
Q ss_conf 977867998847899988999999874586042111246-5687489999997565799870899975999579897548
Q gi|254780316|r 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGA 79 (805)
Q Consensus 1 M~is~~WL~~~v~~~~~~~~l~~~lt~~G~EVe~i~~~~-~~~~vvvg~v~~~~~hP~adl~v~~Vd~g~~~~~~IvcgA 79 (805)
|+||++||+||+|+++++++|+++||++|+|||+++..+ .+++||||+|++++|||| ++|+||+|+++.+||||||
T Consensus 1 M~is~~WL~e~v~~~~~~~~l~~~lt~~G~EVE~~~~~~~~~~~vvvg~v~~~~~hp~---~vc~V~~g~~~~~~IvcgA 77 (795)
T 2rhq_B 1 MLISNEWLKDYVDAGVKVEDLAERITRTGIEVDNMIDYSKDIKNLVVGYIQSKEKGSG---NICQVDIGEEEPVQIVCGA 77 (795)
T ss_dssp CEEEHHHHTTTBCCSSCHHHHHHHHHHTTCEEEEEEETTTTCEEEEEEEEEEEECSSS---CEEEEECSSSSCEEEECCC
T ss_pred CCCCHHHHHHHHCCCCCHHHHHHHHHHCEEEEEEEEECCCCCCCEEEEEEECCCCCCC---CEEEEECCCCCEEEEECCC
T ss_conf 9478899998719998999999998656081127884576779889999935658999---6799986899568898699
Q ss_pred CCCCCCCEEEEECCCCEECCCCEEEEEEHHCCCCCCCHHHHHHHCCCCCC------CCCEEEECCCCCCCCCHHHHHCCC
Q ss_conf 34558978989668779258983983312058650545411887699854------775078168888884558870888
Q gi|254780316|r 80 PNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELS 153 (805)
Q Consensus 80 ~Nv~~g~~V~~A~~Ga~lp~g~~~i~~~~irGv~S~GMlCS~~ELgl~~~------~~gI~~l~~~~~~G~~~~~~l~l~ 153 (805)
|||++|++||||+|||+|| |+++||++||||++|+|||||++||||+++ |+|||+||+++++|+++.+|++++
T Consensus 78 ~Nv~~g~~V~vA~~Ga~lp-~~~~i~~~klrGv~S~GMlcS~~ELGl~~~~~~~~~~~gI~~l~~~~~~G~~~~~~l~l~ 156 (795)
T 2rhq_B 78 PNVDAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMICSLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTALYLN 156 (795)
T ss_dssp TTCCTTCEEEEEEEEEEET-TTEECCCEEETTEEECSEECCSGGGTCCGGGSCHHHHTSCCBCSSCCCTTSBHHHHTTCS
T ss_pred CCCCCCCEEEEECCCCEEC-CCCEEEEEEECCCCCCCEECCHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHCCC
T ss_conf 7236899999978698947-997896301378326732569878699866676667784598789888996889971899
Q ss_pred CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 55999870878576655578999877641156666554566777777741589840731112332011232245566377
Q gi|254780316|r 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 (805)
Q Consensus 154 D~i~ei~iTpNR~D~ls~~GiARElaa~~~~~l~~~~~~~~~~~~~~~~~i~v~i~~~~~c~~y~~~~i~~v~~~~SP~w 233 (805)
|++|||++||||||||||+|+||||||+++.+++.|..............+.+.+++++.||+|.+++|+||++++||+|
T Consensus 157 D~iieieitpNR~D~lS~~GiARelaa~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~Sp~~ 236 (795)
T 2rhq_B 157 DQVMEFDLTPNRADALSMVGTAYEVAALYQTEMTKPETQSNETSESATNELSVTIDNPEKVPYYSARVVKNVSIEPSPIW 236 (795)
T ss_dssp CEEEEEECCGGGGGGSSHHHHHHHHHHHHTCCBCCCCCCCCCCSCBGGGTCEEEESCTTTCSEEEEEEEECCCCCCCCHH
T ss_pred CEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCHH
T ss_conf 83899856898488765888999999874676567632233324456765057630645586465799626677899499
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCC-CEEEEEECCCCCCHHHHHHHCCCCCCCCEEEECCCCCCC
Q ss_conf 8788886401321039999989998608700000102233-326886235543114554201124543200002567631
Q gi|254780316|r 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 (805)
Q Consensus 234 l~~rL~~~Gir~inniVDitNyvmle~GqPlHafD~dki~-~~i~vr~a~~~E~~~~Ld~~e~~L~~~~lvI~d~~~~ia 312 (805)
+|+||+++|+||+||+||||||+|+++|||+||||+||+. +.+.||.|+++|+|.+||+++|.|+++++||+|+++|+|
T Consensus 237 l~~rL~~~Gir~in~iVDitNyvmle~GqPlhafD~~~i~~~~i~vr~a~~~e~~~~Ld~~~~~l~~~~lvI~d~~~~ia 316 (795)
T 2rhq_B 237 VQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAKDEETMTTLDNNERKLVDTDIVISNGQEPIA 316 (795)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHSCCCEEEEGGGSSSSEEEEEECCTTCEEEBTTSCEEECCTTCEEEESSSSEEE
T ss_pred HHHHHHHCCCCCCCCCCCCHHHCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCEEEEECCCCCEE
T ss_conf 99999986997501014742102133289641045541247752898436665301115530114553058954997355
Q ss_pred CHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCC
Q ss_conf 0011135531201367269999715787888778876165401554413455301358899988875212334555-652
Q gi|254780316|r 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDI 391 (805)
Q Consensus 313 laGImGg~~s~v~~~T~~illEsA~F~p~~Ir~tar~l~l~TdaS~RfERgvd~~~~~~al~r~~~Li~e~~gg~~-~~~ 391 (805)
|||||||.+|+|+++|||||||||+|||..||+|+|+++++||||+|||||+||..+..++.|+++|+.++|||++ ...
T Consensus 317 laGImgg~~s~V~~~T~~iliE~a~fdp~~Ir~tsr~l~l~tdas~Rfergvd~~~~~~a~~~~~~li~~~~~~~~~~~~ 396 (795)
T 2rhq_B 317 LAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLNLRSEASSRFEKGIATEFVDEAVDRACYLLQELASGEVLQDR 396 (795)
T ss_dssp ETTTEEBSSSBCCTTCCEEEEEEEECCHHHHHHHHHHTTCCCHHHHHHHTCCCGGGHHHHHHHHHHHHHHHSCCEECBCC
T ss_pred ECCEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 35556675556776650344010346889999998874013201111036777410799999999987754266423330
Q ss_pred EEEEECCCCCCCEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 58741355431000043113333113458789999999840222103456236640345433440256767676535233
Q gi|254780316|r 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 (805)
Q Consensus 392 ~~~~~~~~~~~~I~l~~~~i~~ilG~~i~~~ei~~iL~~Lgf~v~~~~~~~~V~vPs~R~DI~~e~DLiEEIaRiyGYdn 471 (805)
.+.+..+..+++|.++.++++++||++++.+++.++|++|||+++.+++.|.|+||+||+||.+++||||||+|+|||||
T Consensus 397 ~~~~~~~~~~~~I~l~~~~i~~ilG~~i~~~~i~~iL~~Lg~~v~~~~~~~~V~vP~~R~DI~~e~DliEEIaRiyGydn 476 (795)
T 2rhq_B 397 VSSGDLGSFVTPIDITAEKVNKTIGFNLSNDEIQSIFRQLGFETTLKGETLTVNVPSRRKDITIKEDLIEEVARIYGYDE 476 (795)
T ss_dssp EEEECCCCSEEEEEEEHHHHHHHHTCCCCHHHHHHHHHHTTCEEEEETTEEEEEEETTCTTCCSHHHHHHHHHHHHCTTT
T ss_pred EECCCCCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCC
T ss_conf 21144434321465038999765298751366999998558879962870899899854534766537776774437300
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCHHHC
Q ss_conf 46676554434576789988954678988787787740232100482576552000-00000246776432101512211
Q gi|254780316|r 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-QRELEILNPISADMSNMRTSLLP 550 (805)
Q Consensus 472 Ip~~~l~~~~~~~~~~~~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~~-~~~i~l~NPlS~e~s~lR~SLlp 550 (805)
||++++.... .........+...+++|+.|+++||+|++||||++++....++.. .+.++|+||+|+|+++||+||+|
T Consensus 477 ip~~~p~~~~-~~~~~~~~~~~~~~~lr~~L~~~Gf~Ev~tysf~s~~~~~~~~~~~~~~v~l~NPls~e~s~lR~SLlp 555 (795)
T 2rhq_B 477 IPSSLPVFGE-VTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLP 555 (795)
T ss_dssp SCCCCCCCSS-CCCCCCCHHHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHH
T ss_pred CCCCCCCHHC-CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCHHHHHHHHHCCCHH
T ss_conf 7676862000-245678878988999999998649864345224330021110234654332157213425565065326
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCC---CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 067764321015861134543024444777544---31000221035431012462023454433331468887531111
Q gi|254780316|r 551 GLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 (805)
Q Consensus 551 ~LL~~~~~N~~r~~~~i~lFEiG~Vf~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ 627 (805)
|||+++++|++|+++++++||+|+||.++.... +...++++ ..|......|....+.+|||++||.+++
T Consensus 556 ~LL~~~~~N~~r~~~~~~lFEiG~vf~~~~~~~~~~~~~~l~~~--------~~g~~~~~~~~~~~~~~df~~~Kg~ve~ 627 (795)
T 2rhq_B 556 HLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVEYLSGI--------LTGEYVVNAWQGKKEEIDFFIAKGVVDR 627 (795)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEEEEEECCCTTSCCEEEEEEEEE--------EESEEEEEGGGTEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCHHCCCEEEECCCCCCCCCCHHCEEEE--------EECCCCCHHHCCCCCCCCHHHHHHHHHH
T ss_conf 67888887774589875510064289647764453101204677--------7156340121267656788999889999
Q ss_pred HHHHCCCCCCEEEECCCCCCCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCC
Q ss_conf 11101453330330588656789816999987929999985477899996687997899998787623545202456631
Q gi|254780316|r 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 (805)
Q Consensus 628 ll~~l~~~~~~~~~~~~~~~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~~~~ 707 (805)
++..++. .+.+.+..+++|||||||.|+++|+.+ |++|+|||.++++|+|+ ++|+|||+|+.|... .....+|
T Consensus 628 ll~~l~~--~~~~~~~~~~~~hpgrsA~I~~~~~~I-G~iGelhP~v~~~~~i~-~v~~~Ei~l~~l~~~---~~~~~~~ 700 (795)
T 2rhq_B 628 VAEKLNL--EFSYKAGKIEGLHPGRTAIVSLEGQDI-GFIGELHPQVAADNDLK-RTYVFELNYDAMMQV---AVGYINY 700 (795)
T ss_dssp HHHHHTC--CCEEEECCCTTEEEEEEEEEEETTEEE-EEEEEECHHHHHHTTCC-SEEEEEEEHHHHTTC---CCCSCCC
T ss_pred HHHHHHH--HCEECCCCCCCCCCCCEEEEEECCEEE-EEEEEECHHHHHHCCCC-CEEEEEEEHHHHHHH---HCCCCCC
T ss_conf 9998433--122213777667888569999999399-99999999999876999-769999997994420---1157777
Q ss_pred CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCC-CCEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH
Q ss_conf 3689888720018999668879999999997111-003576989876367799884269999998477988899999999
Q gi|254780316|r 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 (805)
Q Consensus 708 ~~~s~fP~v~RDls~iv~~~v~~~~I~~~i~~~~-~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~EI~~i 786 (805)
+++|+||+++|||||++|+++++++|+++|++++ ++|+++++||+|+|+++++||||+||||+|||.+|||||+||+++
T Consensus 701 ~~~s~fP~v~RDls~vv~~~v~~~~i~~~i~~~~~~ll~~v~lfDvY~g~~i~~gkkSla~rl~fqs~~kTLtd~ev~~~ 780 (795)
T 2rhq_B 701 EQIPKFPGVTRDIALEVNHDVPSSELKQIIHNNGEDILQSTLVFDVYEGEHLEKGKKSVAIRLNYLDTEDTLTDERVSKI 780 (795)
T ss_dssp CCCCSSCCEEEEEECBEETTSCHHHHHHHHHHHCGGGEEEEEEEEEEC-----CCEEEEEEEEEECCSSSCCCHHHHHHH
T ss_pred CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHH
T ss_conf 97899998657899998998959999999985591517187899997899999996699999999999989799999999
Q ss_pred HHHHHHHHHHHHCCEE
Q ss_conf 9999999999951198
Q gi|254780316|r 787 MDRIVENVVKKTNAVL 802 (805)
Q Consensus 787 ~~~ii~~l~~k~ga~L 802 (805)
+++|++.|+++ ||+|
T Consensus 781 ~~~ii~~l~~~-Ga~l 795 (795)
T 2rhq_B 781 HDKILEALQAE-GATI 795 (795)
T ss_dssp HHHHHHHHHHH-TCBC
T ss_pred HHHHHHHHHHC-CCCC
T ss_conf 99999999975-8899