HHsearch results for GI: 254780316 and protein with PDBid: 2zin_A
>2zin_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, pyrrolysine, ATP analogue, non-natural amino acid, unnatural amino acid, ATP-binding; HET: ANP LBY; 1.79A {Methanosarcina mazei} PDB: 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A*
Probab=99.52 E-value=8.2e-14 Score=115.68 Aligned_cols=211 Identities=12% Similarity=0.044 Sum_probs=145.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH--HHHHCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCH
Q ss_conf 98895467898878778774023210048257655200--0000002467764321015122110677643210158611
Q gi|254780316|r 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 (805)
Q Consensus 489 ~~~~~~~~~ir~~L~~~Gf~Ev~tysl~s~~~~~~~~~--~~~~i~l~NPlS~e~s~lR~SLlp~LL~~~~~N~~r~~~~ 566 (805)
.......+.+|+++.+.||.||.|..+.+.+.....+. ........++.+.++ .||+++.|++...+..+.+.....
T Consensus 78 ~~~~~i~~~ir~~f~~~Gf~EV~TP~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lr~~~~~~~~~~~~~~~~~~~~p 156 (291)
T 2zin_A 78 NYLGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRVDKNF-CLRPMLAPNLYNYLRKLDRALPDP 156 (291)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEETTTE-EECSCSHHHHHHHHHHHTTTSCSS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEECCCCHH-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 5999999999999998879999765223312201368887741212132578011-266423451457778776521334
Q ss_pred HHHHHHCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
Q ss_conf 34543024444777544310002210354310124620234544333314688875311111110145333033058865
Q gi|254780316|r 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 (805)
Q Consensus 567 i~lFEiG~Vf~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~df~dlKg~v~~ll~~l~~~~~~~~~~~~~~ 646 (805)
+|+||+|+||..+..... +. ..++...|.......+|.++++.++.+++.++.. +......
T Consensus 157 ~r~f~ig~vfR~e~~~~~-h~--------------~eF~q~e~~~~~~~~~~~dl~~~~~~~l~~lg~~----~~~~~~~ 217 (291)
T 2zin_A 157 IKIFEIGPCYRKESDGKE-HL--------------EEFTMLNFCQMGSGCTRENLESIITDFLNHLGID----FKIVGDS 217 (291)
T ss_dssp EEEEEEEEEECCCSCSSS-CC--------------SEEEEEEEEEESTTCCHHHHHHHHHHHHHHHTCC----CEEECC-
T ss_pred CEEEEECCEEEECCCCCC-CC--------------CCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCC----EEEECCC
T ss_conf 024664101220345678-88--------------8638999999899997999999999999985992----7871366
Q ss_pred CCCCCCEEEEEECCEEEEEEEEEECHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCC-CCCCCCCCCCCEEEE
Q ss_conf 67898169999879299999854778999966879978999987876235452024566-313689888720018
Q gi|254780316|r 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDL 720 (805)
Q Consensus 647 ~~hPgrsa~I~~~gk~iiG~iG~ihP~i~~~~~i~~~v~~~EI~ld~L~~~~~~~~~~~-~~~~~s~fP~v~RDl 720 (805)
+++.+++..+..+...+ |..|..||.+++++++..|++++.+.++.|........... .++..+-|..++++|
T Consensus 218 ~~~~~~~~~~~~~~~ei-~~~~~~~~~v~~~~gid~p~~~~g~g~erla~~~~~~~dir~~~r~~~y~~Giel~~ 291 (291)
T 2zin_A 218 CMVYGDTLDVMHGDLEL-SSAVVGPIPLDREWGIDKPWIGAGFGLERLLKVKHDFKNIKRAARSGSYYNGISTNL 291 (291)
T ss_dssp ----CEEEEEEETTEEE-EEEEESCCGGGGGGTCCSCEEEEEEEHHHHHHHHTTCSSGGGGSSCSSEETTEESCC
T ss_pred CCCCCCCCCCCCCCEEE-ECCCEECHHHHHHCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHCEECCEECCC
T ss_conf 56767660216687574-038601699998669999818867589999987529993455541230006502369