HHsearch results for GI: 254780316 and protein with PDBid: 3a2k_A

>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}

Probab=93.99  E-value=0.035  Score=33.20  Aligned_cols=57  Identities=18%  Similarity=0.011  Sum_probs=34.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCC-CCCEE-----EECCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf             134587899999998402221034-56236-----64034543344025676767653523346
Q gi|254780316|r  416 GIDVPIEDSLRILERLGFSVIGEY-DKFEV-----SVPSWRQDVEEKADLVEEILRIYGVDQIK  473 (805)
Q Consensus       416 G~~i~~~ei~~iL~~Lgf~v~~~~-~~~~V-----~vPs~R~DI~~e~DLiEEIaRiyGYdnIp  473 (805)
                      |.+. ++.+..+|-+|--.-...+ .+...     .++.+|+-+...-+-|++.++-+|..-+.
T Consensus       126 aHh~-dD~~ET~l~~l~rg~~~~gl~~~~~~~~~~~~~~iRPll~~~k~ei~~y~~~~~l~~~~  188 (464)
T 3a2k_A          126 GHHG-DDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRC  188 (464)
T ss_dssp             CCCH-HHHHHHHHHHHHHCCCSSSTTCSCSEEECSSSEEECGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred             EEEC-CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             4204-75899999875431001233455321333456577899975799999999984898666