HHsearch results for GI: 254780316 and protein with PDBid: 3hj7_A

>3hj7_A TRNA(Ile)-lysidine synthase; helix-turn-helix, pseudo-knot, ATP-binding, cytoplasm, ligase, nucleotide-binding, tRNA processing; 2.20A {Geobacillus kaustophilus}

Probab=96.39  E-value=0.0021  Score=41.90  Aligned_cols=70  Identities=14%  Similarity=0.193  Sum_probs=55.9

Q ss_pred             EEECCCCCCCEEEEEECCCCCCHHHHHHH-CCC-------------CCCCCEEEECCC-CCCCCHHHCCCCCCCCCCCCC
Q ss_conf             00010223332688623554311455420-112-------------454320000256-763100111355312013672
Q gi|254780316|r  265 HVFDASRISDVLTVRRACSGEKILALDNQ-EYD-------------LSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTT  329 (805)
Q Consensus       265 HafD~dki~~~i~vr~a~~~E~~~~Ld~~-e~~-------------L~~~~lvI~d~~-~~ialaGImGg~~s~v~~~T~  329 (805)
                      -.||+|++..++.||.-+.|+.|..+... ..+             .-....|++|++ .++.++|+--++...++++|+
T Consensus        43 ~~lD~d~i~~pL~vR~r~~GDr~~p~G~~g~Kklk~~~id~kip~~~R~~~pll~~~~~~IlWv~G~r~s~~~~i~~~tk  122 (142)
T 3hj7_A           43 FVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAFEAQNRGQA  122 (142)
T ss_dssp             EEECGGGSCSSEEEECCCTTCEEEBSTTCCEEEHHHHHHHTTCCHHHHTTCCEEECTTCCEEEETTTEEBTTSCCCSCCS
T ss_pred             EEECHHHCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHCCCEEEEEECCCCEEEEECCCCCCEECCCCCCC
T ss_conf             99748998697499687999999889999860089999785999799892699993899699994711063041798986


Q ss_pred             EEEEE
Q ss_conf             69999
Q gi|254780316|r  330 DVLVE  334 (805)
Q Consensus       330 ~illE  334 (805)
                      +++.=
T Consensus       123 ~~l~l  127 (142)
T 3hj7_A          123 RYILL  127 (142)
T ss_dssp             CEEEE
T ss_pred             EEEEE
T ss_conf             79999