BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780316|ref|YP_003064729.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] (805 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780316|ref|YP_003064729.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254039993|gb|ACT56789.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 805 Score = 1631 bits (4224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 805/805 (100%), Positives = 805/805 (100%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC Sbjct: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS Sbjct: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 Query: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA Sbjct: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 Query: 181 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA 240 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA Sbjct: 181 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA 240 Query: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD Sbjct: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 Query: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF Sbjct: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP Sbjct: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT Sbjct: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD Sbjct: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG 600 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG Sbjct: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG 600 Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA Sbjct: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL Sbjct: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 Query: 721 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD Sbjct: 721 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 Query: 781 DDIRILMDRIVENVVKKTNAVLRSS 805 DDIRILMDRIVENVVKKTNAVLRSS Sbjct: 781 DDIRILMDRIVENVVKKTNAVLRSS 805 >gi|315122260|ref|YP_004062749.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495662|gb|ADR52261.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 807 Score = 1211 bits (3134), Expect = 0.0, Method: Compositional matrix adjust. Identities = 587/807 (72%), Positives = 693/807 (85%), Gaps = 2/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-LD 59 MKFTLSWLKDHLDTD SL +ICD LTSIGLEVE VD R++L+PF IV++LSV+R+ + + Sbjct: 1 MKFTLSWLKDHLDTDASLGEICDNLTSIGLEVEGVDTRDSLAPFRIVEILSVQRHSNSQN 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++L+ID G+ + +QVVCGAPNVRVGLLG+WAPPGSCIPEN+M +NVRKIRGIES GMMC Sbjct: 61 LSVLQIDVGEQKTVQVVCGAPNVRVGLLGIWAPPGSCIPENHMTINVRKIRGIESMGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKELMLSD I+ELPIDAPVGGR SDY LSDPIID++LTPNRSDC GVRGIALDLV Sbjct: 121 SEKELMLSDSCVGIIELPIDAPVGGRFSDYFGLSDPIIDIALTPNRSDCSGVRGIALDLV 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AAGLGKLKEI+ SS SIP+EI+FDLDD+ LCKGFAMCCV+GVRN +P WMRQRL+ Sbjct: 181 AAGLGKLKEIDAPVFSSSGSIPVEIQFDLDDARLCKGFAMCCVRGVRNTSSPKWMRQRLE 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 AVGLR ISALVDITNY+++DRGYPSHVFD+S+IS +T+RRA SGEK +AL+++EY+LSP Sbjct: 241 AVGLRPISALVDITNYIAIDRGYPSHVFDSSKISGDITIRRARSGEKFIALNDKEYELSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 DNVV+ASD I+SIAGIIGGK+A CDD+TTDVLVEVALWD +NIA SG LGI TDSRYR Sbjct: 301 DNVVVASDNCIESIAGIIGGKNACCDDDTTDVLVEVALWDSLNIAHSGHVLGISTDSRYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVDLQGM+P+LK+ VSLILSLCGG ASDI + ++ YKPR I F+NSEVKRL+GI+V Sbjct: 361 FERGVDLQGMLPILKYEVSLILSLCGGMASDIFVGKHEIYKPRTIEFINSEVKRLAGIEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 P+++SL IL LGF VI + + VSVPSWRQDVEEKADLVEEILRIYGVD+IK EPL L Sbjct: 421 PLKESLCILRNLGFDVIEKKGVWTVSVPSWRQDVEEKADLVEEILRIYGVDKIKGEPLSL 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 T + KRNLSLQQSR RY KRVLASR+MME++ WSFI K+QSVLFGGGQ ELE+LNPIS Sbjct: 481 THLGKKRNLSLQQSRIRYSKRVLASRSMMELITWSFIPKKQSVLFGGGQPELELLNPISV 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MSNMRTSLLPGLLKA R++DRAI D AIFEVSHVYEND PEGQK MA+GIRKGSS +E Sbjct: 541 EMSNMRTSLLPGLLKAVSRSIDRAIMDLAIFEVSHVYENDRPEGQKCMASGIRKGSSCME 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 GSGR WS++S ++CRFVD+FDAKADAL+VIE FVS+DSL+ ESGAPSWYHP RSG IK + Sbjct: 601 GSGRFWSEQSVKKCRFVDVFDAKADALAVIEAFVSIDSLQIESGAPSWYHPKRSGTIKVN 660 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 +VLGYFGEFHP ILDFFGLSNPIC FEVYLD IPI + K +KK+++L S HP++RD Sbjct: 661 NNVVLGYFGEFHPEILDFFGLSNPICCFEVYLDYIPIPKNKPIASKKIINLPSFHPIRRD 720 Query: 720 LAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 AFI+D+ +P TL+NI++ +DR LI DV VFDVF+GKSLGE KKS+A++VLIQPLK+ F Sbjct: 721 FAFIIDKTVPTATLINIVRRIDRQLIVDVRVFDVFEGKSLGEDKKSIALEVLIQPLKEAF 780 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRSS 805 D+D+R L +RI+ENV KK+NAVLRSS Sbjct: 781 CDEDVRALTERIIENVTKKSNAVLRSS 807 >gi|227824129|ref|YP_002828102.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium fredii NGR234] gi|227343131|gb|ACP27349.1| phenylalanyl-tRNA synthetase beta chain PheT [Sinorhizobium fredii NGR234] Length = 808 Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/812 (54%), Positives = 589/812 (72%), Gaps = 12/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHLDT+ SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L++DTG + +QVVCGAPN R GL+G +A PG+ +P ++ ++V IRG+ES GMMC Sbjct: 61 LKVLKVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIDVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++L DAP+G + Y L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLAEDAPLGASYAAYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESI----PLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWM 234 A+GLG LK + P S S+ P++++ DL DD LC GFA+ V+GVRN +P WM Sbjct: 181 ASGLGTLK----TKPAPSFSVEGETPVKVRLDLGDDRHLCPGFALRLVRGVRNGPSPAWM 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 RQRL A+GLR I+ALVDITNY++ D+G P HVFDA+++S LTVRRA GEK+LALD +E Sbjct: 237 RQRLTAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVSGNLTVRRAKEGEKVLALDTRE 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y LSP NVVIA + ++SI G++GG+H+GCD+ TTDVL+E ALWDP+NIA++G++LGIIT Sbjct: 297 YTLSPANVVIADEDGVESIGGVMGGEHSGCDEATTDVLIESALWDPMNIAKTGRSLGIIT 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+RYRFERGVD + M+P L+ L+L LCGGTA+ + + + P+ + F SEVKRL Sbjct: 357 DARYRFERGVDPEYMVPGLERATELVLQLCGGTAAKLDVVGYEGHTPKIVDFPVSEVKRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 +G+DV E+S+ ILE+LGF V G ++F V+VPSWR DV+ KADLVEE++RI+GVD I + Sbjct: 417 TGLDVSSEESVSILEKLGFGVAGSGERFRVTVPSWRPDVDGKADLVEEVMRIHGVDNIVA 476 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 LP + + + L+ Q RTR +R LASR M+E V WSFIS++Q+ LFGGGQ L++ Sbjct: 477 AALPSHKAVNGKILTTLQIRTRQARRALASRGMLEAVTWSFISEDQARLFGGGQPALKLA 536 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP+ Q+ +A G+R+G Sbjct: 537 NPIAADMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYEGDTPDTQRRVAGGVRRG 596 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRS 653 ++ + G+GRLWS+ ++ + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRS Sbjct: 597 TASLTGAGRLWSNAAKGGGKPVDVFDAKADAIAVLEACSVPMGNVQFEAGGPAWYHPGRS 656 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G IK +IVLG FGEFHP LD +S PI GFE+Y+D++P +KK T+TK + LS Sbjct: 657 GTIKLGPKIVLGAFGEFHPKTLDALDVSGPIAGFEIYVDAMPEPKKKTTRTKPALELSPF 716 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 VKRD AF+VD+ + A + DR L+ V VFDVF+G SLGEGKKS+AI+V IQ Sbjct: 717 QAVKRDFAFVVDKTVEAAAIARAASGADRKLVTGVNVFDVFEGSSLGEGKKSIAIEVTIQ 776 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P++ T D+D L RIV NV K T VLR+ Sbjct: 777 PVERTLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|307301185|ref|ZP_07580947.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] gi|307321086|ref|ZP_07600491.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306893258|gb|EFN24039.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306903641|gb|EFN34228.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] Length = 808 Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/808 (53%), Positives = 579/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAP+G +DY L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLPEDAPLGTSYADYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK P++++ DL +D LC GFA+ V+GV+N +P WMRQRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKVRLDLGEDRHLCPGFALRLVRGVKNGPSPAWMRQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYTLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+NTTDVL+E ALWDP+NIA++G+ LGIITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDENTTDVLIESALWDPMNIAKTGRTLGIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M P L+ L+L LCGGTA+ + + ++PR + F SEV+RL+G++ Sbjct: 361 RFERGVDPEYMAPGLERATELVLELCGGTAAKMDVVGYDGHEPRSVDFPVSEVRRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V+VPSWR D++ KADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVTVPSWRPDIDGKADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR +R LA+R M+E V WSFI + + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGKILTTLQIRTRQARRALATRGMLEAVTWSFIPEGHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGYGDVAIFEVSGTYEGDTPEAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRSG IK Sbjct: 601 NGTGRLWSNAVKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSGTIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFE+Y+D++P +KK T+TK + LS VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDALDVSGPLAGFEIYIDAMPEPKKKATRTKPALELSPFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V DR LI V VFDVF+G SLGEG+KSVAI+V IQP++ Sbjct: 721 RDFAFVVDKGVEAAAIVRAASGADRKLITAVNVFDVFEGASLGEGRKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|222084533|ref|YP_002543062.1| phenylalanyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|221721981|gb|ACM25137.1| phenylalanyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 807 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/807 (53%), Positives = 573/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE VD++ A PF I KVLS E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICARLTMIGLEVEDVDDKAAFKPFVIAKVLSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + IQVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGAGKPIQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y + DP+I+++LTPNR DC GV GIA DL Sbjct: 121 SEKELEISDSHDGIIDLPEDAPVGTSFAAYTGIDDPMIEINLTPNRPDCTGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK + P ++K +LDD+ LC GFA+ V+GV+N +P WM+QRL+ Sbjct: 181 ASGLGTLKPRAVPSFAIEGETPTDVKIELDDARLCPGFALRLVRGVKNGPSPKWMQQRLQ 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVDITNY++ D+G P HVFDA+++ L VRRA GE +LALD +EY L P Sbjct: 241 AIGLRPISALVDITNYMTFDQGRPMHVFDAAKVKGNLVVRRAKDGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA D I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG+ LGIITD+RYR Sbjct: 301 NNVVIADDNGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRGLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L+ CGGTA+ + Y + + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLACCGGTAAKAKVEGYKGYDAKIVDFPFSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+ IL +LGF V G ++ V+VP WR DV+ KADLVEEI+RI+GVD IK +PL Sbjct: 421 STEEGKSILTKLGFLVSGSGERVSVAVPPWRSDVDGKADLVEEIMRIHGVDNIKPQPLAS 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 V + + L++ Q RTR KR LASR M+E V WSFIS++Q+ LFGGG L++ NPI+A Sbjct: 481 HNVVNGKILTVLQIRTRTAKRALASRGMLEAVTWSFISEDQAKLFGGGSNALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 DMSDMRPSLLPGLLSAAQRNADKGYGDVAIFEVSGTYENDRPEGQRRVAGGIRRGTATLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ ++ + VD+FDAKADAL+V+E + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRMWSNAAKGGGKPVDVFDAKADALAVLEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ ++ + GFEVY+D++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLEALDVAGALAGFEVYIDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AGT++ DR LI V VFD+F+G SLGE KKS+AI+V IQP + T Sbjct: 721 DFAFVVDKSVEAGTIIRAATGADRKLITGVNVFDIFEGASLGEDKKSIAIEVQIQPAERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR Sbjct: 781 LTDEDFEALTQKIVANVTKTTGGVLRG 807 >gi|15964039|ref|NP_384392.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium meliloti 1021] gi|30316267|sp|Q92SS9|SYFB_RHIME RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15073215|emb|CAC41723.1| Probable phenylalanyl-tRNA synthetase beta chain [Sinorhizobium meliloti 1021] Length = 808 Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/808 (53%), Positives = 579/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAP+G +DY L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLPEDAPLGTSYADYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK P++++ DL +D LC GFA+ V+GV+N +P WMRQRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKVRLDLGEDRHLCPGFALRLVRGVKNGPSPAWMRQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYTLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+NTTDVL+E ALWDP+NIA++G+ LGIITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDENTTDVLIESALWDPMNIAKTGRTLGIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M P L+ L+L LCGGTA+ + + ++PR + F SEV+RL+G++ Sbjct: 361 RFERGVDPEYMAPGLERATELVLELCGGTAAKMDVVGYDGHEPRSVDFPVSEVRRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V+VPSWR D++ +ADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVTVPSWRPDIDGRADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR +R LA+R M+E V WSFI + + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGKILTTLQIRTRQARRALATRGMLEAVTWSFIPEGHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGYGDVAIFEVSGTYEGDTPEAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRSG IK Sbjct: 601 NGTGRLWSNAVKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSGTIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFE+Y+D++P +KK T+TK + LS VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDALDVSGPLAGFEIYIDAMPEPKKKATRTKPALELSPFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V DR LI V VFDVF+G SLGEG+KSVAI+V IQP++ Sbjct: 721 RDFAFVVDKGVEAAAIVRAASGADRKLITAVNVFDVFEGASLGEGRKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|150398673|ref|YP_001329140.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium medicae WSM419] gi|150030188|gb|ABR62305.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium medicae WSM419] Length = 808 Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/808 (53%), Positives = 578/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ SLE+IC LT IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETEASLEEICARLTMIGLEVEDVDDKAAFKPFVIAKVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG +D+ L DP+I ++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHNGIIDLPEDAPVGASYADFAGLDDPVIAINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK + P++++ DL +D LC GFA+ V+GV+N +P WMR+RL Sbjct: 181 ASGLGTLKTRPMPSFAVEGETPVKVRLDLGEDGHLCPGFALRLVRGVKNGPSPAWMRRRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 MAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYMLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+ TTDVL+E ALWDP+NIAR+G+ L IITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDETTTDVLIESALWDPMNIARTGRTLSIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P L+ L+L LCGGTA+ + + + P++ F SEVKRL+G++ Sbjct: 361 RFERGVDPEYMVPGLERATELVLELCGGTAARMDVVGYDGHTPKRADFPVSEVKRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V VPSWR D++ KADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVKVPSWRPDIDGKADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L++ Q RTR +R LASR M+E V WSFI +E + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGRILTVLQIRTRQARRALASRGMLEAVTWSFIPQEHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGHGDVAIFEVSGTYEGDTPGAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRS IK Sbjct: 601 NGAGRLWSNSMKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSATIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFEVY+D++P ++K T+TK+ + LS+ VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDVLDVSGPLSGFEVYIDAMPEPKRKATRTKQALELSAFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V DR L+ V VFDVF+G SLGEGKKSVAI+V IQP++ Sbjct: 721 RDFAFVVDRDVEAAAIVRAATGADRKLVTSVNVFDVFEGASLGEGKKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|15887609|ref|NP_353290.1| phenylalanyl-tRNA synthetase subunit beta [Agrobacterium tumefaciens str. C58] gi|30316251|sp|Q8UIN4|SYFB_AGRT5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15155152|gb|AAK86075.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium tumefaciens str. C58] Length = 807 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/807 (53%), Positives = 578/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC+ LT+IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKEHLETDATLDEICERLTAIGLEVEDVDDKAAYKPFVIAKVVSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +Q+VCGAPN R GL+G A PG +P ++ + V KIRG+ES GMMC Sbjct: 61 LKVLMVDAGDGKPVQIVCGAPNARAGLVGALARPGVYVPGIDVTLAVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNISDDHDGIIDLPEDAPVGTSFATYAGLDDPVIEINLTPNRPDCTSIYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLGKLK + P+++K +LDD++LC GF++ V+GV+N +P WM+QRL Sbjct: 181 ASGLGKLKTKAAPSFKVEGATPVDVKLELDDAALCPGFSLRIVRGVKNGPSPKWMQQRLM 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE ILALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGDLTVRRAKDGETILALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA + ++SI G++GG+H+GCD+NT DVL+E ALWDPINIA++G++LGIITD+RYR Sbjct: 301 NNVVIADEKGLESIGGVMGGEHSGCDENTIDVLIESALWDPINIAKTGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A + I ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGIAGEAKIVGYKGHQPKVVDFPLSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+SL IL+ LGF V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK EPL Sbjct: 421 SSEESLAILKGLGFGVEGTGERVSVTVPSWRPDVDGKADLVEEVMRIHGVDNIKPEPLEN 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR +R LASR M+E V WSFI + Q+ LF GG L++ NPI+A Sbjct: 481 FGAVNGRILTTLQIRTRTARRALASRGMLEAVTWSFIPEAQAKLFSGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A GIR+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADKGHGDVAIFEVSGTYEGDTPEKQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 GSGR+WS+ ++ + VD++DAKADALSV+E + + +++ E+GAP+WYHPGRSG IK Sbjct: 601 GSGRMWSNAAKGGGKPVDVYDAKADALSVLEACGLPMANVQIEAGAPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S CGFE+YLD++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLSELDVSGTYCGFEIYLDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG ++ + DR LI V VFD+F+G SLGE +KSVAI+V IQP+ T Sbjct: 721 DFAFVVDKSVEAGAIIKAATSADRKLITGVNVFDIFEGASLGENRKSVAIEVQIQPVDKT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR+ Sbjct: 781 LTDEDFEALTAKIVGNVEKSTGGVLRA 807 >gi|241207217|ref|YP_002978313.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861107|gb|ACS58774.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 807 Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust. Identities = 430/807 (53%), Positives = 572/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTEIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPDDAPVGQSYAAYAHLDDPLIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I+ LTVRRA GE +LALD +EY LSP Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKINGNLTVRRAAEGETVLALDQREYKLSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDENGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD M P L+ L+L LCGG A+ I Y+P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPDYMAPGLERTTELVLELCGGKAARAEIVGYQGYEPKIVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFTVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPTLKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D A+FEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLSAAQRNADKGYGDVALFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRAWSNTAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVY+D++P +++K T+TK + LS V+R Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYVDAMPEAKRKATRTKSALELSPFQVVRR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG +V DR L+ V VFD+F+G SLG+GKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVEAGAIVKAATGADRKLVTGVNVFDIFEGASLGDGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|209551839|ref|YP_002283756.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537595|gb|ACI57530.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 810 Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/810 (52%), Positives = 571/810 (70%), Gaps = 6/810 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTQIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGAGAPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPEDAPVGKSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKLTLDLDDQKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGNLTVRRAVEGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD M+P L+ L+L LCGGTA+ + Y+P+ + F SEVKRL+G+D+ Sbjct: 361 FERGVDPDYMVPGLERTTELVLELCGGTAAKAEVVGYKGYQPKVVEFPFSEVKRLTGLDI 420 Query: 420 PIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 P+E+ +IL RLGF V G+ V+VPSWR DV+ KADLVEE++RI+GVD IK P Sbjct: 421 PVEEMKQILSRLGFVVTMGNGDVGSCSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAP 480 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NP Sbjct: 481 LESHAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANP 540 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+A+MS+MR SLLPGLL A RN D+ D A+FEVS YEND P+GQ+ +A GIR+G++ Sbjct: 541 IAAEMSDMRPSLLPGLLTAAQRNADKGYGDVALFEVSGTYENDRPDGQRRVAGGIRRGTA 600 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 + G+GR+WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG Sbjct: 601 SLAGAGRMWSNAAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGT 660 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 IK ++VLGYFGEFHP L+ +S +CGFEVY+D++P +KK T+TK + LS Sbjct: 661 IKMGPKVVLGYFGEFHPLTLEALDVSGALCGFEVYIDAMPEPKKKATRTKPALDLSPFQA 720 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 VKRD AF+VD+ + AG ++ + DR L+ V VFD+F+G S+GEGKKSVAI+V IQP Sbjct: 721 VKRDFAFVVDKTVEAGAIIKAATSADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPA 780 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D+D L +IV +V K T VLRS Sbjct: 781 ERTLTDEDFEALTQKIVASVTKFTGGVLRS 810 >gi|222147174|ref|YP_002548131.1| phenylalanyl-tRNA synthetase subunit beta [Agrobacterium vitis S4] gi|221734164|gb|ACM35127.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium vitis S4] Length = 807 Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/807 (52%), Positives = 574/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHLDTD +L+++C+ LT+IGLEVE VD++ A PF I K+L+ E++P D Sbjct: 1 MKFTLSWLKDHLDTDATLDQVCERLTAIGLEVEDVDDKAAYKPFVIAKILAAEKHPSADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +QVVCGAPN R GL+G + PG +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLSVDAGDGKPVQVVCGAPNARAGLIGAFGRPGMYVPGLDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD+ I++LP DAPVG + Y + DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNMSDNHDGIIDLPEDAPVGTSFAAYAGIDDPMIEINLTPNRPDCTSIFGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK+ +E+K +LDD+ LC GFA V GV+N +P WM++RL Sbjct: 181 ASGLGTLKQPKAPSFAVEGETSVEVKLELDDAKLCPGFAYRLVHGVKNGPSPVWMQKRLI 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVD+TNY++ D+G P HVFDA ++ VLTVRRA GE+ILALD + Y L+P Sbjct: 241 AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGVLTVRRAKDGEEILALDTRTYKLTP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 + VVIA D ++SI GI+GG+H+GCD+NT++VL+E ALWDPINIA+SG++LGIITD+RYR Sbjct: 301 NTVVIADDNGLESIGGIMGGEHSGCDENTSNVLIESALWDPINIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L +CGG A+ + + + + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLEMCGGKAASAKVVGYQGHTKKVVDFPFSEVKRLTGLNV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 ++S IL LGF V GE + +V+VPSWR DV+ KADLVEE++R++GVD+I EPLP Sbjct: 421 STDESRTILTGLGFEVSGEGETVKVAVPSWRPDVDGKADLVEEVMRMHGVDKITPEPLPS 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LASR MME V WSFIS EQ+ LFGGG+ EL+++NPI+A Sbjct: 481 MGAVNTKILTTLQIRTRTAKRALASRGMMEAVTWSFISAEQAALFGGGKPELKLVNPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN DR D AIFEVS YE DTPEGQ+ +A G+R+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADRGFGDVAIFEVSGTYEGDTPEGQRRVAGGVRRGTASLS 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ ++ + VD++DAKADAL+V+E + + +++ E G P WYHPGRSG IK Sbjct: 601 GAGRMWSNATKGGGKPVDVYDAKADALAVLEACGLPMGNVQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S +CGFE+YLD++ +KK T+TK + LS L VKR Sbjct: 661 GPKVVLGYFGEFHPKTLAALDVSGTLCGFEIYLDAMQEPKKKATRTKPALDLSPLQMVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+V++ + AG ++ + DR LI V VFDVF+G S+GEGKKSVAI+VLIQP T Sbjct: 721 DFAFVVERSVEAGAIIKAATSADRKLITGVNVFDVFEGASVGEGKKSVAIEVLIQPSDKT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T LR+ Sbjct: 781 LTDEDFDALTKKIVGNVEKTTGGALRA 807 >gi|190889930|ref|YP_001976472.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium etli CIAT 652] gi|190695209|gb|ACE89294.1| phenylalanyl-tRNA synthetase protein, beta subunit [Rhizobium etli CIAT 652] Length = 807 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/807 (52%), Positives = 571/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE+VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICTRLTEIGLEVEEVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKE+ +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKEMQISDNHDGIIDLPDDAPVGQSYASYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GF++ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRAAPSFAVEGETPVKLTLDLDDPKLCPGFSLRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVTGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGGT + + Y+P+ + F SEV+RL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLDLCGGTPARAEVVGYKGYEPKVVDFPYSEVRRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 STEESNAILARLGFTVSGTGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L + NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALRLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG IK Sbjct: 601 GGGRMWSNAVKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G ++ DR L+ V VFD+F+G S+GEGKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVESGAIIKAATGADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|116250038|ref|YP_765876.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|115254686|emb|CAK05760.1| putative phenylalanyl-tRNA synthetase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 807 Score = 886 bits (2290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/807 (53%), Positives = 573/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTEIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPEDAPVGQSYAAYAHLDDPLIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKMRPAPSFAVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLI 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I+ L VRRA GE +LALD +EY LSP Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKINGNLAVRRAAEGETVLALDQREYKLSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDENGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A+ I Y+P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGKAAKAEIVGYQGYEPKIVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFTVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D A+FEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLSAAQRNADKGYGDVALFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRAWSNAAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVY+D++P +++K T+TK + LS V+R Sbjct: 661 GPKVVLGYFGEFHPLTLESLDVSGALCGFEVYVDAMPEAKRKATRTKPALELSPFQLVRR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG +V DR L+ V VFD+F+G S+G+GKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVEAGAIVKAATGADRKLVTAVNVFDIFEGASVGDGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|325291695|ref|YP_004277559.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] gi|325059548|gb|ADY63239.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] Length = 807 Score = 884 bits (2284), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/807 (52%), Positives = 576/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC+ LT+IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKEHLETDATLDEICERLTAIGLEVEDVDDKAAYKPFVIAKVVSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +Q+VCGAPN R GL+G A PG +P ++ + V KIRG+ES GMMC Sbjct: 61 LKVLMVDAGDGKPVQIVCGAPNARAGLVGALARPGVYVPGIDVTLAVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNISDDHDGIIDLPEDAPVGTSFATYAGLDDPVIEINLTPNRPDCTSIYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLGKLK S P+++K +LDD++LC GF++ V+GV+N +P WM+QRL Sbjct: 181 ASGLGKLKTKPAPSFKVEGSTPVDVKLELDDAALCPGFSLRIVRGVKNGPSPKWMQQRLM 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE ILALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGDLTVRRAKEGETILALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA + ++SI G++GG+H+GCD+NT DVL+E ALWDPINIA++G++LGIITD+RYR Sbjct: 301 NNVVIADEKGLESIGGVMGGEHSGCDENTVDVLIESALWDPINIAKTGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A + + ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGVAGEAKVVGYKGHQPKVVDFPLSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+SL IL+ LGF + G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK EPL Sbjct: 421 SAEESLAILKGLGFGIEGTGERVSVTVPSWRPDVDGKADLVEEVMRIHGVDNIKPEPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR +R LASR M+E V WSFI + + LFGGG L++ NPI+A Sbjct: 481 FGAVNGRILTTLQVRTRTARRALASRGMLEAVTWSFIPEAHAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADKGHGDVAIFEVSGTYEGDTPDTQRRVAGGVRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 GSGR+WS+ ++ + VD++DAKADALSV+E + + +++ E+GAP WYHPGRSG IK Sbjct: 601 GSGRMWSNATKGGGKPVDVYDAKADALSVLEACGLPMANVQIEAGAPGWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S GFE+YLD++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLSELDVSGVYSGFEIYLDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG ++ + DR LI V VFDVF+G SLGE +KS+AI+V IQP+ T Sbjct: 721 DFAFVVDKSVEAGAIIKAATSADRKLITGVNVFDVFEGASLGESRKSIAIEVQIQPVDRT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR+ Sbjct: 781 LTDEDFEALTAKIVGNVEKSTGGVLRA 807 >gi|327191956|gb|EGE58937.1| phenylalanyl-tRNA synthetase protein, beta subunit [Rhizobium etli CNPAF512] Length = 807 Score = 883 bits (2282), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/807 (52%), Positives = 570/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE+VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICTRLTEIGLEVEEVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKE+ +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKEMRISDNHDGIIDLPDDAPVGQSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRAAPSFSVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVTGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A+ + ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLDLCGGMAARAEVVGYKGHEPKVVDFPYSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 STEESNAILARLGFMVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L + NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALRLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG IK Sbjct: 601 GGGRMWSNAVKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G ++ DR L+ V VFD+F+G S+GEGKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVESGAIIKAATGADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|163757706|ref|ZP_02164795.1| phenylalanyl-tRNA synthetase beta subunit [Hoeflea phototrophica DFL-43] gi|162285208|gb|EDQ35490.1| phenylalanyl-tRNA synthetase beta subunit [Hoeflea phototrophica DFL-43] Length = 803 Score = 866 bits (2237), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/807 (52%), Positives = 569/807 (70%), Gaps = 7/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++IC+ LT+IGLEVE VD+++A PF I KVLS E++P+ D Sbjct: 1 MKFTLSWLKDHLETDATLDQICERLTAIGLEVEDVDDKKAYQPFVIAKVLSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G +Q+VCGAPN R GL+G A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LKVLSVDAGDGNPVQIVCGAPNARAGLVGALARPGTYVPGIDVTLSVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SERELDMSDEHDGIIDLPDDAPVGTPFAAYAGLDDPVIEINLTPNRPDCTSIFGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK +K LDD SLC GFA V+GV+N +P WM++RL Sbjct: 181 ASGLGTLKAPKAPEFAVEGETTQNVKLILDDESLCPGFAWRLVRGVKNGPSPKWMQKRLL 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVD+TNY++ D+G P HVFDA ++ L VRRA GE+ILALD + Y L+P Sbjct: 241 AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGDLVVRRAQEGEEILALDTRTYKLNP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 NVVIA D +SI GI+GG+H+GCD+NTT+VL+E ALWDPINIA++G++ IITD+RYR Sbjct: 301 SNVVIADDNGPESIGGIMGGEHSGCDENTTNVLIESALWDPINIAKTGRSHSIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L +CGG A+ + ++ + + F SEV+RL+G+ V Sbjct: 361 FERGVDPEYMVPGLERTTELVLEMCGGKAAAARVEGYKGHQKKIVDFPFSEVRRLTGLSV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E++ IL LGF V G + +V+VPSWR DV+ KADLVEE++R++GVD IK EPLP Sbjct: 421 SNEEARAILNGLGFEVSGSGETVQVAVPSWRPDVDGKADLVEEVMRVHGVDNIKPEPLPT 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 +++ L+ Q RTR KR LASR M+E V WSFIS+EQ+ LFGGG R L++ NPI+A Sbjct: 481 MGAVNEKILTTLQIRTRLAKRALASRGMLEAVTWSFISEEQAKLFGGGDRSLKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGL+ A GRN R D A+FEVS YENDTP+GQ+ +A G+R+G++G+ Sbjct: 541 DMSDMRPSLLPGLISAAGRNGARGYGDVALFEVSGTYENDTPKGQRRVAGGVRRGTAGLN 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G GR W ++ V +FDAKADA++V+E +D L FE GA WYHPGRSG+IK Sbjct: 601 GGGRHWDGAAKP----VGVFDAKADAIAVLEACGAPVDRLSFERGAADWYHPGRSGLIKL 656 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + VLG+FGEFHPN LD +S P+CGFEV++D+IP ++K T+TK V+ LS+ V+R Sbjct: 657 GPKTVLGHFGEFHPNTLDALDVSGPLCGFEVFIDAIPEPKRKVTRTKPVLELSAFQAVRR 716 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + + TLV + D+ L+ VTVFD+F+G SLGEGKKSVAI++ IQP + T Sbjct: 717 DFAFVVDADVASATLVRAAQGADKQLVTGVTVFDLFEGPSLGEGKKSVAIEITIQPRERT 776 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ + ++ NV K + VLR Sbjct: 777 LTDEDLDKIAKSVIANVEKSSGGVLRG 803 >gi|86355922|ref|YP_467814.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli CFN 42] gi|86280024|gb|ABC89087.1| phenylalanyl-tRNA synthetase, beta chain protein [Rhizobium etli CFN 42] Length = 807 Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/807 (53%), Positives = 570/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE VD++ A PF I KVLS E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICARLTEIGLEVEDVDDKAAFKPFVIAKVLSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P + + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIEVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDNHDGIIDLPEDAPVGQSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK + P+++ DLDD LC GFA+ V+GVRN +P W++QRL Sbjct: 181 ASGLGVLKTRSAPAFSIEGETPVKLTLDLDDPRLCPGFALRLVRGVRNGPSPRWLQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKIKGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCDD+T DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEEGIESIGGIMGGEHSGCDDDTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGGTA+ + Y P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGTAARAEVVGYHGYDPKVVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGFSV G + V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFSVSGSGEHVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ +D AIFEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYSDVAIFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P W+HPGRSG IK Sbjct: 601 GAGRMWSNVARGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWFHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 +IVLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKIVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALDLSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G +V DR LI + VFD+F+G S+GEGKKSVAI+V IQP+ T Sbjct: 721 DFAFVVDKTVESGAIVKAATGADRKLITGINVFDIFEGASVGEGKKSVAIEVQIQPVDRT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVTKFTGGVLRS 807 >gi|110633034|ref|YP_673242.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium sp. BNC1] gi|110284018|gb|ABG62077.1| phenylalanyl-tRNA synthetase beta subunit [Chelativorans sp. BNC1] Length = 801 Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/807 (51%), Positives = 567/807 (70%), Gaps = 9/807 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ +L++I TLT IGLEVE VD++ AL PF I KVL+ +++PD D Sbjct: 1 MKFTLSWLKDHLETEATLDEIVATLTMIGLEVESVDDKAALKPFVIAKVLTAQQHPDADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + IQVVCGAPN R GL+G +A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LKVLTVDTGDGKPIQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLSVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + + L DP+I++ LTPNR DC V GIA DL Sbjct: 121 SERELKLSDEHDGIIDLPNDAPVGESFAKWARLDDPVIEIGLTPNRPDCTSVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AAGLGKLK + + P+++K + LC GFA+ V+GV+N +P W++QRL Sbjct: 181 AAGLGKLKSGTVEPVAGKGACPVDVK--ILAPELCPGFALRLVRGVKNGPSPKWLQQRLI 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ LVDITNY++ DRG P HVFDA ++ L +RRA +GEK+LALD +EY+L+P Sbjct: 239 AIGLRPINTLVDITNYITFDRGRPLHVFDAVKVKGNLVIRRAEAGEKVLALDGREYELNP 298 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 + VIA D ++SIAG++GG+H+GCD+NTTDVL+E ALW+ +NIAR+G++LGIITD+RYR Sbjct: 299 EVCVIADDNGVESIAGVMGGEHSGCDENTTDVLIESALWNALNIARTGRDLGIITDARYR 358 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ +++ LCGG AS+ + + + + F SEVKRL+G+DV Sbjct: 359 FERGVDPEFMVPGLELATRMVIDLCGGEASEARVVGYRGHTAKIVTFPTSEVKRLTGLDV 418 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 P ++SL IL RLGF G D EVSVPSWR D++ KADLVEE++RI+GV++I+ +P+ Sbjct: 419 PADESLSILSRLGFKPEGSGDVVEVSVPSWRPDIDGKADLVEEVMRIHGVNRIEPQPMIA 478 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 R L+ Q RTR KR LA R MME V WSFI +E + LF ++ +++ NPI+A Sbjct: 479 KDAVGGRVLTAAQIRTRQAKRALAVRGMMEAVTWSFIPEEHARLFAENRKLIKLANPIAA 538 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS MR SL+PGL+ A RN DR AD A+FEVS YE D PE Q+ AAG+R+G++ ++ Sbjct: 539 DMSTMRPSLMPGLIAAAQRNADRGFADVALFEVSAAYEGDQPEEQRRAAAGLRRGTARLD 598 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 GR WS + VD+F AKADA +V+E +D L+ E+G P WYHPGRSG IK Sbjct: 599 AQGRHWSGNTAP----VDVFAAKADAFAVLEACGAPVDKLQVEAGGPHWYHPGRSGTIKL 654 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + +LG FGEFHP L+ +S P+CGFEV+LD+IP + + T+TK + LS VKR Sbjct: 655 GPKNILGTFGEFHPKTLEEMDVSGPLCGFEVFLDAIPEPKARATRTKPRLDLSPFQAVKR 714 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AGTL + D +L+ DV VFDVF+G +LG KKS+AI+V IQP++ T Sbjct: 715 DFAFVVDKTVEAGTLTRAAASADKKLVSDVNVFDVFEGAALGPDKKSIAIEVTIQPIERT 774 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +RIVENV K+T VLRS Sbjct: 775 LTDEDFEALANRIVENVRKQTGGVLRS 801 >gi|260463248|ref|ZP_05811450.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259031098|gb|EEW32372.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 802 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/808 (52%), Positives = 566/808 (70%), Gaps = 10/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L +I + LTSIGLEVE VD++ +L PF I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLAEIVERLTSIGLEVEHVDDKSSLKPFVIAKVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKPPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y L DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPADAPVGTSFATYAHLDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG+L I S P+++K + LC GFA+ VKGV+N +P W++QRL Sbjct: 181 AASGLGRLVGGAIMPHAGSGMCPVKVKIVAPE--LCPGFALRLVKGVKNGPSPKWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR ISALVDITNYV+ DRG P HVFDA +++ L VRRA +GEK+LALD +EY L+ Sbjct: 239 IAIGLRPISALVDITNYVTFDRGRPLHVFDARKVAGNLVVRRARNGEKVLALDGREYTLT 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P+ VIA D ++SIAGI+GG+H+GCD+NTTDVLVE ALWDPI AR+G+ LGIITD+RY Sbjct: 299 PEMCVIADDDGVESIAGIMGGEHSGCDENTTDVLVESALWDPITTARTGRTLGIITDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P ++ L+L CGGT ++I +A ++P+ + F S+++RL+GI+ Sbjct: 359 RFERGVDPEFMVPGVELATKLVLDFCGGTPTEIEVAGYGGHQPKMVSFPLSDIRRLTGIE 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP +SL IL RLGF+ G D V+VPSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 419 VPRAESLDILSRLGFTADGSGDVVNVTVPSWRPDVDGKADLVEEVMRIHGVDNIAPQPLG 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR KR LA R MME V WSFI + LFGGGQ L++ NPI+ Sbjct: 479 AHDAVNAKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPARHAELFGGGQTALKLANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ + Sbjct: 539 ADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAKL 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 +GSGR W+ S V +FDAKADA++ +E +D L+ E G P+WYHPGRSG IK Sbjct: 599 DGSGRNWAGNSGA----VGVFDAKADAIAALEACGAPVDRLQIEPGGPAWYHPGRSGTIK 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + VLG FGEFHP L+ +S P+CGFEV++D++P + K TKTK + LS+ VK Sbjct: 655 LGPKTVLGTFGEFHPKTLEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSAFQAVK 714 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + AGTLV D +LI V+VFD+F+G SLG KKS+AI+V IQP++ Sbjct: 715 RDFAFVVDRSVEAGTLVRAALAADKKLITGVSVFDIFEGASLGADKKSIAIEVSIQPVEK 774 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIVENV K+T VLR Sbjct: 775 TLTDEDFEALAKRIVENVGKQTGGVLRG 802 >gi|319780183|ref|YP_004139659.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166071|gb|ADV09609.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 802 Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust. Identities = 425/808 (52%), Positives = 567/808 (70%), Gaps = 10/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LTSIGLEVE VD++ +L PF I +VL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVERLTSIGLEVEHVDDKSSLKPFVIARVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKPPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y + DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPEDAPVGTSFAAYAHIDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG+L I + + P IK ++ LC GFA+ VKGV+N +P W++QRL Sbjct: 181 AASGLGRLVGGAIMPHVGNGMCP--IKVTIEAPELCPGFALNLVKGVKNGPSPKWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR ISALVDITNYV+ DRG P HVFDAS+++ L VRRA GEK+ ALD +EY L+ Sbjct: 239 IAIGLRPISALVDITNYVTFDRGRPLHVFDASKVAGNLVVRRARDGEKVQALDGREYTLT 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P+ VIA D ++SIAG++GG+H+GCD+NT+DVL+E ALWDPI AR+G+ LGIITD+RY Sbjct: 299 PEMCVIADDNGVESIAGVMGGEHSGCDENTSDVLIESALWDPITTARTGRTLGIITDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P ++ L+L CGGT +++ + + P+ + F SEVKRL+GI+ Sbjct: 359 RFERGVDPEFMVPGVELATKLVLDFCGGTPTEMEVVGYAGHTPKIVSFPLSEVKRLTGIE 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP +SL IL RLGF G D +V+VPSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 419 VPSAESLDILSRLGFKPEGSGDVVDVAVPSWRPDVDGKADLVEEVMRIHGVDNIAPQPLG 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR KR LA R MME V WSFI + + LFGGGQ L++ NPI+ Sbjct: 479 AHDAVNAKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPAKHAELFGGGQTALKLANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ + Sbjct: 539 ADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAKL 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 +GSGR W+ S V +FDAKADA++ +E +D L+ E+G P+WYHPGRSG IK Sbjct: 599 DGSGRNWAGNSGP----VGVFDAKADAIAALEACGAPVDRLQIEAGGPAWYHPGRSGTIK 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + VLG FGEFHP L+ +S P+CGFEV++D++P + K TKTK + LS VK Sbjct: 655 LGPKTVLGTFGEFHPKTLEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSPFQAVK 714 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + AGTLV D +LI V+VFD+F+G SLGEGKKS+AI+V IQP++ Sbjct: 715 RDFAFVVDKSVEAGTLVRAALAADKKLITAVSVFDIFEGASLGEGKKSIAIEVSIQPVEK 774 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RI+ENV K+T VLR Sbjct: 775 TLTDEDFEALAKRIIENVGKQTGGVLRG 802 >gi|13474216|ref|NP_105784.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium loti MAFF303099] gi|30316274|sp|Q98CQ1|SYFB_RHILO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|14024968|dbj|BAB51570.1| phenylalanine-tRNA ligase beta chain [Mesorhizobium loti MAFF303099] Length = 802 Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/809 (52%), Positives = 565/809 (69%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++I + LTSIGLEVE VD++ +L PF I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEIVERLTSIGLEVEHVDDKSSLKPFVIAKVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKSPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y L DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPADAPVGTSFASYAHLDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A+GLG LK + P E+ +K ++ LC GFA+ V+GV+N +P W++QR Sbjct: 181 AASGLGTLKSAAVEKIPGKGET---PVKVVIEAPELCPGFALRLVRGVKNGPSPKWLQQR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR ISALVDITNYV+ DRG P HVFDA +++ L VRRA GEK++ALD +EY L Sbjct: 238 LIAIGLRPISALVDITNYVTFDRGRPLHVFDARKVAGNLVVRRAHDGEKVMALDGREYTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +PD IA D ++SIAG++GG+H+GCD+NTTDVL+E ALWDPI AR+G+ LGIITD+R Sbjct: 298 TPDMCAIADDNGVESIAGVMGGEHSGCDENTTDVLIESALWDPITTARTGRTLGIITDAR 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD + M+P ++ L+L LCGG ++ + +KP+ + F SEV RL+GI Sbjct: 358 YRFERGVDPEFMVPGVELATRLVLDLCGGEPAETEVVGYAGHKPKIVSFPISEVTRLTGI 417 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +VP E+SL IL RLGF G + +V++PSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 418 EVPKEESLDILSRLGFKPQGSSEVVDVALPSWRPDVDGKADLVEEVMRIHGVDNIAPQPL 477 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 + + L+ Q RTR KR LA R MME V WSFI + + LFGGGQ L++ NPI Sbjct: 478 GAHDAVNSKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPAKHAELFGGGQTALKLANPI 537 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ Sbjct: 538 AADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAK 597 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 ++GSGR W+ S V +FDAKADA++ +E ++ L+ E+G P+WYHPGRSG I Sbjct: 598 LDGSGRSWAGNSGP----VGVFDAKADAIAALEACGAPVERLQIEAGGPAWYHPGRSGTI 653 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + VLG FGEFHP ++ +S P+CGFEV++D++P + K TKTK + LS+ V Sbjct: 654 KLGPKTVLGTFGEFHPKTMEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSAFQAV 713 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 KRD AF+VD+ + AGTLV D +LI V+VFD+F+G SLG KKS+AI+V IQP++ Sbjct: 714 KRDFAFVVDKAVEAGTLVRAALAADKKLITAVSVFDIFEGASLGADKKSIAIEVSIQPVE 773 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L R+VENV K+T VLR Sbjct: 774 KTLTDEDFEALAKRVVENVGKQTGGVLRG 802 >gi|239833164|ref|ZP_04681493.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239825431|gb|EEQ96999.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 804 Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/808 (52%), Positives = 560/808 (69%), Gaps = 8/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A F I +VL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFKAFKIARVLTAVQHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LRVLSVDAGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + Y L D +I++ LTPNR+DC G+ GIA DL Sbjct: 121 SERELELSDEHNGIIDLPEDAPVGTSFATYAGLDDAVIEIGLTPNRADCTGIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P++I D D C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPEAVKGEGETPVKIILDQDAKHPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE IL LD +EY Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAAKDGETILGLDQREYKFK 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA + +SIAGI+GG+H+GCD+NTTDVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 PGMYVIADENGPESIAGIMGGEHSGCDENTTDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + SL+L LCGG + + + +PR + F SEVKRL+GID Sbjct: 361 RFERGVDPEMMVPGAEIATSLVLELCGGAPTVLDVVGYGKPEPRVVDFPVSEVKRLTGID 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP E SL IL+RLGF V G+ + VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VPYETSLDILKRLGFGVEGDGKVIKAIVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDTALFEVSGIYEGDTPDDQRRVAGGVRRGTARV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLRFESGAPSWYHPGRSGIIK 657 +GSGR W+ + V +FDAKADAL+ +E +D ++ E+G P W+HPGRSG +K Sbjct: 601 DGSGRFWAGNAAP----VGVFDAKADALAALEVAGAPVDRIQIEAGGPEWFHPGRSGTLK 656 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 ++VLGYFGEFHP+ L+ +S +CGFEVY+D+IP + K T+TK ++LS +K Sbjct: 657 LGPKVVLGYFGEFHPDTLEALDVSGALCGFEVYIDAIPEPKAKSTRTKPALNLSQFQSLK 716 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD + AG +V + D +LI V VFDVF G SLGEGKKS+A++VL+QP Sbjct: 717 RDFAFVVDADVEAGNVVKAVSTADKKLIVGVQVFDVFTGASLGEGKKSIAVEVLLQPQDR 776 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L ++V +V K+T VLR Sbjct: 777 TLTDEDLETLSKQVVASVAKQTGGVLRG 804 >gi|306842765|ref|ZP_07475407.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO2] gi|306287109|gb|EFM58614.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO2] Length = 804 Score = 830 bits (2145), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/810 (51%), Positives = 557/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK ++LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALNLSQFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|256112449|ref|ZP_05453370.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|265993884|ref|ZP_06106441.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|262764865|gb|EEZ10786.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 804 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/810 (51%), Positives = 557/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRTLTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ +L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|153008133|ref|YP_001369348.1| phenylalanyl-tRNA synthetase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151560021|gb|ABS13519.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 804 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 413/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +LE+I + LT IGLEVE VD+R A F I KV+S ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLEQIVEKLTDIGLEVESVDDRAAFKAFKIAKVVSAVQHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LRVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + Y L D +I++ LTPNR+DC G+ GIA DL Sbjct: 121 SERELELSDEHNGIIDLPEDAPVGTSFATYAGLDDAVIEIGLTPNRADCTGIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG +K P+++ D DD + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTVKNTLPEAVKGEGETPVKVILDQDDENPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE IL LD +EY Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRLAKDGETILGLDQREYKFK 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA + +SIAGI+GG+H+GCD+NTTDVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 PGMYVIADENGPESIAGIMGGEHSGCDENTTDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + PR I F SEVKRL+GI+ Sbjct: 361 RFERGVDPEMMVPGAELATKLVLELCGGEPTVLDVVGYSKPTPRVIDFPVSEVKRLTGIE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V + S IL+RLGFSV G+ + +VP+WR DVE KADLVEE++RI+G++QI +PLP Sbjct: 421 VSYDASFDILKRLGFSVEGDGKVIKATVPTWRGDVEGKADLVEEVMRIHGINQIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS Q+ FGGG+ EL++ NPI+ Sbjct: 481 GLGTVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISDAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLVAAQRNADRGFGDTALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 +GSGR W+ + F DA A + P +D ++ E+G P W+HPGRSG +K Sbjct: 601 DGSGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWFHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVY+D+IP + K T+TK ++LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYIDAIPEPKAKSTRTKPALNLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DFAFVVDADVEAGNVVKAVSSADKKLIAGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +V +V K+T VLR Sbjct: 778 LTDEDLEALSKHVVASVAKQTGGVLRG 804 >gi|254694745|ref|ZP_05156573.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261215072|ref|ZP_05929353.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 3 str. Tulya] gi|260916679|gb|EEX83540.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 3 str. Tulya] Length = 804 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 417/810 (51%), Positives = 557/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL AT RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAATQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|225853550|ref|YP_002733783.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis ATCC 23457] gi|256045728|ref|ZP_05448606.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256262965|ref|ZP_05465497.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|260563027|ref|ZP_05833513.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|265992146|ref|ZP_06104703.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|225641915|gb|ACO01829.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella melitensis ATCC 23457] gi|260153043|gb|EEW88135.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|263003212|gb|EEZ15505.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263092839|gb|EEZ17014.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|326410122|gb|ADZ67187.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis M28] gi|326539841|gb|ADZ88056.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella melitensis M5-90] Length = 804 Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/810 (51%), Positives = 557/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ +L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|23502971|ref|NP_699098.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis 1330] gi|161620034|ref|YP_001593921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella canis ATCC 23365] gi|163844139|ref|YP_001628543.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis ATCC 23445] gi|225626496|ref|ZP_03784535.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|254700755|ref|ZP_05162583.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|254705127|ref|ZP_05166955.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|254707357|ref|ZP_05169185.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|256370521|ref|YP_003108032.1| phenylalanyl-tRNA synthetase beta subunit [Brucella microti CCM 4915] gi|260169530|ref|ZP_05756341.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|260567406|ref|ZP_05837876.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 4 str. 40] gi|261314842|ref|ZP_05954039.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261751264|ref|ZP_05994973.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261755829|ref|ZP_05999538.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|261759057|ref|ZP_06002766.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|30316233|sp|Q8FXX4|SYFB_BRUSU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|23349008|gb|AAN31013.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella suis 1330] gi|161336845|gb|ABX63150.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella canis ATCC 23365] gi|163674862|gb|ABY38973.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella suis ATCC 23445] gi|225618153|gb|EEH15196.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|256000684|gb|ACU49083.1| phenylalanyl-tRNA synthetase beta subunit [Brucella microti CCM 4915] gi|260156924|gb|EEW92004.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 4 str. 40] gi|261303868|gb|EEY07365.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261739041|gb|EEY27037.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|261741017|gb|EEY28943.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261745582|gb|EEY33508.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] Length = 804 Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/810 (51%), Positives = 556/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|148559119|ref|YP_001259921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ovis ATCC 25840] gi|148370376|gb|ABQ60355.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ovis ATCC 25840] Length = 804 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/810 (51%), Positives = 556/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDLQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|306843542|ref|ZP_07476143.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO1] gi|306276233|gb|EFM57933.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO1] Length = 804 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDTGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGG + EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGSKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSQFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNIVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254718166|ref|ZP_05179977.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|265983120|ref|ZP_06095855.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306837680|ref|ZP_07470549.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] gi|264661712|gb|EEZ31973.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306407238|gb|EFM63448.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] Length = 804 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 556/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PL + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLQSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK ++LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALNLSQFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNIVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|256158624|ref|ZP_05456511.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|256254032|ref|ZP_05459568.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|261221171|ref|ZP_05935452.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|265997131|ref|ZP_06109688.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|260919755|gb|EEX86408.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|262551599|gb|EEZ07589.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] Length = 804 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+R GF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRFGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254709100|ref|ZP_05170911.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|256030625|ref|ZP_05444239.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|261316599|ref|ZP_05955796.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|265987671|ref|ZP_06100228.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|261295822|gb|EEX99318.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|264659868|gb|EEZ30129.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] Length = 804 Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 556/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLTENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ ++G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFNQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|17988287|ref|NP_540921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|30316258|sp|Q8YE74|SYFB_BRUME RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|17984058|gb|AAL53185.1| phenylalanyl-tRNA synthetase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 804 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/810 (51%), Positives = 556/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL SD+ I++L +APVG + Y+ +DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELDFSDEHNGIIDLAENAPVGTSFAAYMGFNDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ +L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|294851349|ref|ZP_06792022.1| phenylalanyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294819938|gb|EFG36937.1| phenylalanyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 804 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L ++TG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVNTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D +FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIVLFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 NRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254713474|ref|ZP_05175285.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|254716170|ref|ZP_05177981.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261217942|ref|ZP_05932223.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261321208|ref|ZP_05960405.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|260923031|gb|EEX89599.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261293898|gb|EEX97394.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 804 Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RT + +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTCHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|256060087|ref|ZP_05450269.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261324062|ref|ZP_05963259.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261300042|gb|EEY03539.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] Length = 804 Score = 825 bits (2130), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGLEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|62290963|ref|YP_222756.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82700874|ref|YP_415448.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189025177|ref|YP_001935945.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus S19] gi|237816468|ref|ZP_04595461.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|254690258|ref|ZP_05153512.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|254696374|ref|ZP_05158202.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|254731288|ref|ZP_05189866.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|256258511|ref|ZP_05464047.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|260546227|ref|ZP_05821967.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus NCTC 8038] gi|260755797|ref|ZP_05868145.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 6 str. 870] gi|260759020|ref|ZP_05871368.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 4 str. 292] gi|260760745|ref|ZP_05873088.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 2 str. 86/8/59] gi|260884821|ref|ZP_05896435.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297247349|ref|ZP_06931067.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 5 str. B3196] gi|75496047|sp|Q57AD9|SYFB_BRUAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|91208229|sp|Q2YQV4|SYFB_BRUA2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|62197095|gb|AAX75395.1| PheT, phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82616975|emb|CAJ12083.1| ATP/GTP-binding site motif A (P-loop):t-RNA-binding region:Bacterial phenylalanyl-tRNA synthetase, beta subunit:Ferredoxin-fo [Brucella melitensis biovar Abortus 2308] gi|189020749|gb|ACD73471.1| phenylalanyl-tRNA synthetase beta subunit [Brucella abortus S19] gi|237788535|gb|EEP62750.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|260096334|gb|EEW80210.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus NCTC 8038] gi|260669338|gb|EEX56278.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 4 str. 292] gi|260671177|gb|EEX57998.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 2 str. 86/8/59] gi|260675905|gb|EEX62726.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 6 str. 870] gi|260874349|gb|EEX81418.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174518|gb|EFH33865.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 5 str. B3196] Length = 804 Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/810 (51%), Positives = 555/810 (68%), Gaps = 12/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IA +G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIASTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLS 415 RFERGVD + M+P + L+L LCGG + + + + YKP R I F +EVKRL+ Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDV---VGYKPHTARVIDFPVTEVKRLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+DV ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I + Sbjct: 418 GLDVSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ N Sbjct: 478 PLPSHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G+ Sbjct: 538 PIAADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + +EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG Sbjct: 598 AKVEGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGT 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS Sbjct: 655 LKLGPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQS 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +KRD AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP Sbjct: 715 LKRDYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQ 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D+ L +IV +V K+T VLR Sbjct: 775 DRTLTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|49473761|ref|YP_031803.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella quintana str. Toulouse] gi|66773907|sp|Q6G0Y3|SYFB_BARQU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49239264|emb|CAF25585.1| Phenylalanyl-tRNA synthetase beta chain [Bartonella quintana str. Toulouse] Length = 804 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/809 (50%), Positives = 557/809 (68%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++ICD LT+IGLEV VD+R +L F I KVL ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEICDKLTAIGLEVGHVDDRSSLKGFVIAKVLKAMKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG +QV+CGAPN RVGL+GV A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQILLVDTGSGTPVQVICGAPNARVGLVGVLALPGTYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+ELP DAP+GG + Y L DP+ID+SLTPNRSDC GV GIA DL Sbjct: 121 SQAELELSNEHDGIIELPEDAPIGGLFATYAGLDDPVIDLSLTPNRSDCTGVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+G+L+++++ +SS PL + D D+SLC GFA V+ ++N V+P WM+QRL Sbjct: 181 AAGIGRLRKLSLPKFVSSFETPLRVFLDFSQDASLCLGFAWREVRNIQNGVSPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR ++ALVD++NY+S D G P HVFDA +I L VRR GE++ AL+ + Y+LS Sbjct: 241 SAIGLRPMNALVDMSNYISFDVGRPLHVFDADKIKGDLRVRRGREGEQLQALNGKIYNLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + VIA + + SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+++D+RY Sbjct: 301 VKDCVIADEEGVVSIAGIMGGERTSCDEMTRRVIIESALWDARSIAQTGRALGLVSDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M L+ L+L LCGG S I + ++I F SE+KRL+ ++ Sbjct: 361 RFERGVDPAFMETGLEVATELVLRLCGGEGSKTKIVGYQQPEIKQIAFPFSEIKRLTHLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + E + IL LGF + GE + V VP+WR D+ KADLVEE++RIYG+D+I EP+P Sbjct: 421 IEREQVITILTNLGFGIEGEGNVVTVKVPTWRPDIAGKADLVEEVMRIYGLDKI--EPIP 478 Query: 479 LTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + + L+ Q R+R + L R M E V WSFIS+ Q++ FGGGQ +L+++NP Sbjct: 479 LEGFAEAKGQVLTCTQIRSRVTRLALVDRGMREAVTWSFISESQAIAFGGGQAQLKLVNP 538 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+ADMS MR SLLPGLL A RN DR D A+FEVS++YE+DTPE Q+ +A GIR+G+ Sbjct: 539 IAADMSVMRPSLLPGLLIAAQRNADRGFPDLALFEVSNIYEDDTPEKQQSVAGGIRRGTE 598 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 EG+GR W + R VD+F+AKADAL+V+E + +D ++ E GAP WYHPGRSG+ Sbjct: 599 RFEGAGRFWDGHT----RTVDVFEAKADALAVLEACGLDIDKVQIEVGAPDWYHPGRSGV 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K ++I++G+FG HP IL+ +S P+CGFE++LD IP S+KK TK++ + LS Sbjct: 655 MKLGSKIIVGFFGVLHPAILERLDVSGPLCGFEIFLDRIPESKKKATKSRSPLKLSPFQM 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V+RD AF+VD+ I + +V D +LI V VFDVF+ SLGE KKSVAI+V IQP+ Sbjct: 715 VRRDFAFVVDKVITSSLIVRAASGADKKLIHSVRVFDVFEDLSLGEDKKSVAIEVAIQPI 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D DI L ++VENV K T A LR Sbjct: 775 ERTLTDGDIEALASKVVENVTKATGAYLR 803 >gi|49474907|ref|YP_032948.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella henselae str. Houston-1] gi|66773908|sp|Q6G5I2|SYFB_BARHE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49237712|emb|CAF26901.1| Phenylalanyl-tRNA synthetase beta chain [Bartonella henselae str. Houston-1] Length = 804 Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/810 (50%), Positives = 559/810 (69%), Gaps = 14/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++ICD LT+IGLEV+ VD+R L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEICDKLTAIGLEVDHVDDRSYLKGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG + +QV+CGAPN R GL+GV A PG+ +P ++ ++V KIRGIES GMMC Sbjct: 61 LQILSVDTGADKPVQVICGAPNARAGLVGVLALPGTYVPGLDVTLSVGKIRGIESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL LS++ I+ELP D P+G + Y L DP+ID+ LTPNRSDC GVRGIA DL Sbjct: 121 SWAELELSNEHDGIIELPEDVPIGASFAVYAGLDDPVIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G+LKE+++ ++ L++ D S+L C GFA C V+ V+NN +P WM+QRL Sbjct: 181 ATGIGRLKELSLPQLGTTFETSLDVSLDFSQSALLCLGFAWCEVRNVQNNASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY+S D G P HVFDA +I L VR GE++ AL+ + Y+L Sbjct: 241 NAIGLRPINALVDITNYISFDLGRPLHVFDADKIKGNLRVRCGREGEQLQALNGKVYNLG 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + VIA + + SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 VKDCVIADEEGVVSIAGIMGGERTSCDETTRRVIIESALWDAQSIAQTGRALGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M L+ L+L LCGG S + I + R+I F SE+KRL+ ++ Sbjct: 361 RFERGVDPAFMETGLEIATELVLRLCGGEGSKMKIVGYQQPEIRQITFPLSEIKRLTYLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + E ++ IL +LGF G+ + V VP+WR D+ KADLVEE++RIYG+D+IK P+P Sbjct: 421 IEHEQTMTILTQLGFDSEGQGNVVVVKVPTWRPDIVGKADLVEEVMRIYGLDKIK--PIP 478 Query: 479 LTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + ++ L++ Q R+R + LA R M E V WSFIS++Q++ FGGGQ +L+++NP Sbjct: 479 LESFMEVKDPVLTVSQLRSRITRFALAGRGMRETVTWSFISEKQALAFGGGQAQLKLVNP 538 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 ISADMS MR SLLPGLL A RN DR DFA+FEVS++YE+DTP+ Q +A GIR+G+ Sbjct: 539 ISADMSVMRPSLLPGLLVAAQRNADRGFPDFALFEVSNIYEDDTPDKQHRVAGGIRRGTE 598 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYHPGRSG 654 G+GR W+ + R VD+FDAKADAL+V+E L+S ++ E GAP WYHPGRSG Sbjct: 599 QFGGAGRFWNGNA----RAVDVFDAKADALAVLEA-CGLESGKVQIEVGAPDWYHPGRSG 653 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 +IK ++I+LG+FG FHP L+ +S P+CGFE++LD IP +KK TK++ + LSSL Sbjct: 654 VIKLGSKIILGFFGVFHPATLEKLDISGPLCGFEIFLDRIPEPKKKATKSRSPLKLSSLQ 713 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 V+RD AF+VD+ + + +V D +LI V VFDVF+ SLGE KKSVAI+V +QP Sbjct: 714 MVRRDFAFVVDKMVDSSLIVRAASGADKKLIHSVQVFDVFEDLSLGEEKKSVAIEVALQP 773 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ T D+DI L ++VENV + T A LR Sbjct: 774 IERTLTDEDIEELALKLVENVTRMTGASLR 803 >gi|163867390|ref|YP_001608584.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella tribocorum CIP 105476] gi|161017031|emb|CAK00589.1| phenylalanyl-tRNA synthetase beta chain [Bartonella tribocorum CIP 105476] Length = 804 Score = 794 bits (2050), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/809 (50%), Positives = 552/809 (68%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL+ IC+ LT+IGLEV+ VD+R +L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDDICEKLTAIGLEVDHVDDRSSLKDFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL IDTG +QVVCGAPN R GL+GV A PG+ IP ++ ++V KIRG+ES GMMC Sbjct: 61 LQILSIDTGTATPVQVVCGAPNARAGLVGVLARPGTYIPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+ELP DAP+G + Y L DPIID+ LTPNRSDC G+RGIA DL Sbjct: 121 SQAELELSNEHDGIIELPKDAPIGDSFAAYAGLDDPIIDIGLTPNRSDCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+G+G+LKE+++ +S PL++ D SSLC GFA+ V V+N +P WM+QRL Sbjct: 181 ASGIGQLKELSLPKFEASFDTPLDVSLDFSQTSSLCLGFALREVCNVQNGASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVD+TNY+ D G P HVFDA +I L VR A GE++ AL+ + Y L+ Sbjct: 241 SAIGLRPINALVDMTNYICFDLGRPLHVFDADKIKGSLYVRCAREGEQLQALNGKTYHLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + VIA + + SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 VQDCVIADEEGVVSIAGIMGGERTSCDETTRRVIIESALWDAQSIAQTGRTLGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M L+ L+L LCGG S I + ++I F SE+KRL+ +D Sbjct: 361 RFERGVDSAFMETGLEIATELVLRLCGGEVSKAKIVGYQQQETKQIAFPFSEIKRLTHLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + + IL +LGF V G+ + V VPSWR D+ KADLVEE++RIYG+D+I +P+P Sbjct: 421 IEPAKVISILTKLGFCVEGKGNIVTVKVPSWRPDIMGKADLVEEVMRIYGLDKI--QPVP 478 Query: 479 LTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L ++ L+ Q R+R + LA R M E V WSFIS+ Q++ FGGGQ+EL+++NP Sbjct: 479 LENFTKGKDHVLTCAQIRSRAARLSLAHRGMKEAVTWSFISENQALSFGGGQKELKLVNP 538 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+ADMS MR SLLPGLL A RN DR +D A+FE+S +YE DTP+ Q+ + +GIR+G+ Sbjct: 539 IAADMSVMRPSLLPGLLMAAQRNADRGFSDLALFEISSIYEGDTPDKQRRVVSGIRRGTE 598 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 EG+GR W+ + VD+FDAKADAL+V+E + + ++ E GAP WYHPGRSG+ Sbjct: 599 QFEGAGRFWNGNATA----VDVFDAKADALAVLEACDIDVGKVQIEVGAPDWYHPGRSGV 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 IK ++I+LG+FG HP L+ +S P+CGFE++LD IP +KK TK++ + LS Sbjct: 655 IKLGSKIILGFFGVLHPATLEKLDISGPLCGFEIFLDQIPEPKKKTTKSRPPLKLSPFQM 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V+RD AFIVD+ I + +V + D +LI V VFD+F+ KSLGE KKSVAI+++IQPL Sbjct: 715 VRRDFAFIVDKTIASSLIVRAAQGADKKLIHSVQVFDLFEEKSLGEDKKSVAIEIVIQPL 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D D+ + ++ ENV K T A LR Sbjct: 775 ERTLTDKDLEEIAAKVTENVTKMTGAYLR 803 >gi|240849764|ref|YP_002971152.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] gi|240266887|gb|ACS50475.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] Length = 804 Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/809 (50%), Positives = 551/809 (68%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T SL++IC+ LT+IGLEV+ VD+R +L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETSASLDEICEKLTAIGLEVDYVDDRSSLKGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG +QVVCGAPN R GL+GV A PG+ I ++ ++V KIRG+ES GMMC Sbjct: 61 LQILSVDTGTSTPVQVVCGAPNARAGLVGVLALPGTYISGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+ELP DAP+G + Y L DPIID+ LTPNRSDC GVRGIA DL Sbjct: 121 SQAELELSNEHDGIIELPEDAPIGDSFATYAGLDDPIIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+GKLKE+++S S PL++ D DSSLC GFA V+ V+N +P WM+QRL Sbjct: 181 AAGMGKLKELSLSKFEPSFKTPLDVSLDFSQDSSLCLGFAWREVRNVQNGASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVD+TNY+S D G P HVFDA +I L VR A GE++ AL+ + Y L Sbjct: 241 NAIGLRPINALVDMTNYISFDLGRPLHVFDADKIKGNLCVRCAREGEQLQALNGKIYHLG 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 N VIA + I SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 AKNCVIADEEGIVSIAGIMGGERTSCDETTHRVIIESALWDAQSIAQTGRALGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L+ L+L LCGG S I + ++I F SE+KRL+ ++ Sbjct: 361 RFERGVDPAFIETGLEIATELVLRLCGGEVSKKRIVGYQQQEIKQIAFPFSEIKRLTNLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + E + IL +LGF V G+ D V VPSWR D+ KADLVEE++RIYG+D+IK P+P Sbjct: 421 IDPEKVISILTKLGFFVEGKGDVVTVKVPSWRPDIMGKADLVEEVMRIYGLDKIK--PIP 478 Query: 479 LTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L ++++ L+ Q R+R + L R M E V WSFIS+ Q++ FGGGQ EL+++NP Sbjct: 479 LENFAEEKDQILTCAQIRSRTTRLALVQRGMKEAVTWSFISENQALAFGGGQEELKLVNP 538 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+ADMS MR SLLPGL+ A RN DR +D A+FEVS++YE DTP+ Q + +GIR+G+ Sbjct: 539 IAADMSMMRPSLLPGLIMAAQRNADRGFSDLALFEVSNIYEGDTPDKQHRVVSGIRRGTE 598 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 +G+GR W+ + VD+FDAKADAL+++E + + ++ E GAP WYHPGRSG Sbjct: 599 QFKGAGRFWNGNAT----VVDVFDAKADALAILEACDMDVGKVQIEVGAPDWYHPGRSGA 654 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 IK ++I+LG+FG FHP L+ +S P+CGFE++LD IP S+KK TK++ + LS Sbjct: 655 IKLGSKIILGFFGVFHPATLEKLDVSGPLCGFEIFLDRIPESKKKTTKSRPPLKLSPFQM 714 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V+RD AFI D+ + + ++ D +LI V VFD+F+ S GE KKSVAI+V IQP+ Sbjct: 715 VRRDFAFIADKTVASSLIIRAASGADKKLIHSVQVFDIFEDLSFGEDKKSVAIEVTIQPI 774 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D+D+ L +IV+NV K T A LR Sbjct: 775 ERTLTDEDLEKLALKIVDNVTKMTGAYLR 803 >gi|121602576|ref|YP_989560.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella bacilliformis KC583] gi|120614753|gb|ABM45354.1| phenylalanyl-tRNA synthetase, beta subunit [Bartonella bacilliformis KC583] Length = 803 Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/812 (50%), Positives = 550/812 (67%), Gaps = 19/812 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWL+DHL+T+ SL++ICD LT+IGLEV+ VD +L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLRDHLETNASLDEICDKLTAIGLEVDHVDC-ASLEGFVIAKVLTAAKHPDADK 59 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG IQVVCGA N RVGL+ V A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 60 LQILSVDTGAGTPIQVVCGAKNARVGLVSVLALPGTYVPGLDITLSVGKIRGVESFGMMC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S++EL L I+ELP DAPVG + + Y L DP+IDV LTPNRSDC GVRGIA DL Sbjct: 120 SQEELKLPGMRDGIIELPEDAPVGAQFATYAGLDDPVIDVGLTPNRSDCTGVRGIARDLA 179 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+G+LKE+ +S S ++ D +SLC GFA C V+ V+N +P WM+QRL Sbjct: 180 AAGIGRLKELPLSQLTGSFETSTQVSLDFSSGASLCLGFAWCEVRNVKNGASPQWMQQRL 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D G P HVFDA ++ VL VRR GE++ AL+ + Y+L Sbjct: 240 IAIGLRPINALVDITNYMTFDLGRPLHVFDADKVKGVLKVRRGFEGEQLQALNGKIYNLG 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P N VIA D + SIAGI+GGK CD+ T V++E ALWD NIA++G+ LG+I+D+RY Sbjct: 300 PQNCVIADDEGVVSIAGIMGGKRTSCDEMTHRVIIESALWDSQNIAQTGRALGLISDARY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY---KPRKIVFMNSEVKRLS 415 RFERGVD M L+ L L LCGG AS + R I Y K R+IVF SE+KRL+ Sbjct: 360 RFERGVDPAFMESGLEIATELALRLCGGEAS---MMRVIGYQKPKTRQIVFPFSEIKRLT 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 +++ ++ IL RLGFSV GE D V+VP+WR DV KADLVEE++RIYG+++I E Sbjct: 417 NLEIDHGQTVAILTRLGFSVAGEGDVVTVTVPTWRSDVVGKADLVEEVMRIYGLNKI--E 474 Query: 476 PLPLTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P+PL + +N L+ Q +R + LA R MME V WSFIS+ Q+ FGGGQ +L++ Sbjct: 475 PMPLENFVEVKNKILTFSQICSRSARWALACRGMMEAVTWSFISESQACAFGGGQAQLKL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPI+ DMS MR SLLPGLL A RN DR AD ++FE+S++YE DTP+ Q+ +AAGIR+ Sbjct: 535 ANPIAVDMSVMRPSLLPGLLMAAQRNADRGFADLSLFEISNIYEGDTPDKQQCVAAGIRR 594 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGR 652 + EG+GR W+ + + VD+FDAKADA +V+ V + ++ E GAP+WYHPG Sbjct: 595 ETEKFEGAGRFWAGNA----KAVDVFDAKADAFAVLTACGVDVSKVQIEVGAPNWYHPGC 650 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG+IK +I+LG+FG FHP+ L+ +S +CGFE++LD IP +KK TK + + S Sbjct: 651 SGVIKLGPKIILGFFGTFHPDTLETLDVSGRLCGFEIFLDRIPEPKKKATKIRPALKASP 710 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 V+RD AF+VD+ + + ++ D + I V +FD+F+ +LGE KKSVAI+V I Sbjct: 711 FQMVRRDFAFVVDKTVSSSLIIRAASAADKKFIHSVQIFDLFEDLTLGEDKKSVAIEVAI 770 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 QP++ T D+D+ L ++V+NV K T A LR Sbjct: 771 QPVERTLTDEDLEALASKVVDNVTKMTGAYLR 802 >gi|328545356|ref|YP_004305465.1| Phenylalanyl-tRNA synthetase beta subunit [polymorphum gilvum SL003B-26A1] gi|326415098|gb|ADZ72161.1| Phenylalanyl-tRNA synthetase beta subunit [Polymorphum gilvum SL003B-26A1] Length = 805 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/809 (48%), Positives = 542/809 (66%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL++I + LT IGLEVE+V +R A L+PFTI +V+S ER+P+ D Sbjct: 1 MKFTLSWLKDHLETDASLDQIVERLTMIGLEVEQVTDRAAKLAPFTIARVISAERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG + +Q+VCGAPN R GL+GV PG IP + ++V KIR +ES GMM Sbjct: 61 RLQVLKVDTGSGEPLQIVCGAPNARAGLVGVLGRPGDHIPGLGVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I+ELP DAPVG R + + L DP+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSDEHTGIIELPADAPVGARFAAWSGLDDPVIEIGLTPNRPDCTGVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG LKE P + D D LCK F + V+GV+N AP WM++R Sbjct: 181 AAAGLGTLKERRHEQVRGGYPCPTGVTLDFGADKPLCKAFGLRLVRGVKNGPAPKWMQER 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITNY++ D+G P HVFDA+++ L VRRA +GE IL L+ + Y+L Sbjct: 241 LIAIGLRPINALVDITNYMTFDQGRPLHVFDAAKVKGDLVVRRAAAGETILGLNGKSYEL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + VIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWD NIAR+G+ LG+ TD+R Sbjct: 301 DGETCVIADANGVESIAGILGGEPSGCDETTTDVLIESALWDEDNIARTGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L+L LCGG S++ +A ++ R I F SEVKRL+G+ Sbjct: 361 YRFERGVDPDFMLPGLEMATRLVLELCGGEPSEVVVAGSVPETARIIDFPYSEVKRLTGL 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ + + L+ LGF + G D +V+ PSWR D+E KADLVEE++RI G+D++ + PL Sbjct: 421 DLSVPEINVTLKALGFWLSGAGDTVKVAAPSWRPDIEGKADLVEEVVRIVGLDRVSNTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P T R L+ Q R +R LA+R + E V WSFIS+ Q+ FGGG L + NPI Sbjct: 481 PRTGSVGARVLTTGQIRRSRARRTLAARGLDEAVTWSFISRGQAEAFGGGAGTLTLANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 SADMS+MR SLLPGL+ A RN DR AD A+FEV ++ +DTPEGQ+ +AAG+R+G++ Sbjct: 541 SADMSDMRPSLLPGLITAAQRNADRGFADTALFEVGQIFADDTPEGQRMVAAGVRRGTAR 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 G+GR WS + VD+F+A+ADA +V+ +D L+ + AP+W+HPGRSG + Sbjct: 601 FAGAGRHWSGSAGA----VDVFEARADAEAVLSAIGAPVDKLQVHTDAPAWFHPGRSGTL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + +L FGE HP L + P+ GFE++LD++P + + T++K + ++ L PV Sbjct: 657 KLGPKNLLAVFGEIHPRTLGLLDIEGPLVGFEIHLDAVPEPKARATRSKGALDIADLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF+VDQ + A L+ + D+ LI DVT+FDV+ G + +G+KS+AI V +QP + Sbjct: 717 RRDFAFVVDQDVAADRLIKAARGADKALIADVTLFDVYVGAGIADGRKSLAIDVTLQPKE 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +++I + +IV V K T LR Sbjct: 777 RTLTEEEIDAVGKKIVAAVEKATGGTLRG 805 >gi|319403570|emb|CBI77152.1| phenylalanyl-tRNA synthetase beta chain [Bartonella rochalimae ATCC BAA-1498] Length = 804 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/815 (49%), Positives = 555/815 (68%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T SL++ICD L +IGLEV+ +++R +L+ F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETSASLDEICDKLVAIGLEVDHIEDRSSLAGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G IQVVCGA N R GL+GV A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDIGSDSPIQVVCGASNARPGLVGVLALPGTYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL L D+ I+EL DAP+G Y L DP+ID+ LTPNRSDC GVRGIA DL Sbjct: 121 SQAELGLFDEDCGIIELSKDAPIGMSFVTYAGLDDPVIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A G+G+LK++ S P S ++ L+ D SLC GF+ C ++ V+N +P WM+Q Sbjct: 181 ATGIGRLKKL--SLPQLSSFFETSVQVSLNYPQDLSLCSGFSWCEIRNVQNGRSPQWMQQ 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLRSI+AL+DITNY+S D G P HVFDA ++ L+VR GE+ AL+ + Y+ Sbjct: 239 RLNAIGLRSINALIDITNYISFDFGRPLHVFDADKLKGKLSVRLGREGEQFQALNGKVYN 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L +N VIA + + +IAGI+GG+ GCDD T V++E ALWD NIAR+G++LG+I+D+ Sbjct: 299 LGLENCVIADEEGVIAIAGIMGGERTGCDDKTRRVIIESALWDSKNIARTGRSLGLISDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKR 413 RYRFERGVD M L+ L+L CGG AS + I YK +KIVF SE+KR Sbjct: 359 RYRFERGVDPAFMESGLEIAAELVLRFCGGEASTTQV---IGYKKPEIKKIVFPFSEIKR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L+ +++ E + +L +LGF + G+ D V+VP+WR D+ KADLVEEI+RIYG+D+I Sbjct: 416 LTNLEIEPEQAFTLLTQLGFGLEGKGDVVTVTVPTWRLDIVGKADLVEEIMRIYGLDKI- 474 Query: 474 SEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +P+PL + + ++ + Q + +R+LA R MME + WSFIS+ Q++ FGGGQ +L Sbjct: 475 -QPIPLESLAEVKQKTFTFLQICSHTARRILAYRGMMEAITWSFISENQALAFGGGQAQL 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 +++NPI+ DMS MR SLLPGLL A RN+DR +DFA+FEVS++YE DTP+ Q+ +A+GI Sbjct: 534 KLVNPIAFDMSVMRPSLLPGLLVAAQRNIDRGFSDFALFEVSNIYEGDTPDKQRNVASGI 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYH 649 R G+ EG GR W+ + + VD+FDAKADA +V+E +DS ++ E GAP WYH Sbjct: 594 RCGTEKFEGGGRFWTGNA----KAVDVFDAKADAFAVLEA-CGMDSNKVQIEIGAPHWYH 648 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG SG+IK +++LG+FG FHP L+ G+S PICGFE++LD IP +KK TK + + Sbjct: 649 PGCSGVIKLGPKVILGFFGIFHPTTLEKLGVSGPICGFEIFLDRIPEPKKKVTKIRPSLS 708 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RD AF+VD+ + A ++ + D +LI V VFD+F+ SLG KKSVAI+ Sbjct: 709 LSPFQRVRRDFAFVVDKEVAASLIIRAVSGADKKLIHSVQVFDLFEDPSLGHDKKSVAIE 768 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V IQP++ T D+D+ L +I+ENV K T A LR Sbjct: 769 VTIQPMERTLTDEDLERLTLKIIENVAKTTGAYLR 803 >gi|170749560|ref|YP_001755820.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] gi|170656082|gb|ACB25137.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 806 Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/810 (48%), Positives = 536/810 (66%), Gaps = 10/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTL+WLKDHLDT+ SL+ + +TLT IGLEVE ++++ A L P+ I ++L+ E++P+ D Sbjct: 1 MKFTLAWLKDHLDTEASLDTVAETLTRIGLEVEGIEDKAAALKPYVIARILTAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DTG + +QVVCGAPN R L+ V+APPG+ +P N+ ++V IRG+ES GM+ Sbjct: 61 RLRVCTVDTGAGEPVQVVCGAPNARADLVSVFAPPGTYVPGKNITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I+ELP DAPVG + Y L DP+I+++LTPNR DC V GIA DL Sbjct: 121 CSGAELGLGDDHDGILELPTDAPVGQAYALYAGLDDPVIEINLTPNRPDCASVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAG+G LK + P+E+ LD D L FA+ V+GVRN +P WM+ Sbjct: 181 AAAGIGTLKRETLPGVRGEGPCPVEVALALDPADRHLAPLFALRLVRGVRNGPSPAWMQA 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I++LVDITNYV+ DRG P HVFDA++++ LTVRRA GE + ALD + + Sbjct: 241 RLRAIGLRPINSLVDITNYVTFDRGRPLHVFDAAKVAGALTVRRAREGESLRALDGRTHA 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ D VVIA ++SIAGI+GG+ +GCD TTDVL+E ALWDP NIA+SG+ LGIITD+ Sbjct: 301 LTDDTVVIADANGVESIAGIMGGEASGCDAGTTDVLIESALWDPTNIAQSGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGGT ++ +A I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFTLPGLDLATRLVVDLCGGTPTEARVAGAPPESEHVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 IDVP + +ILE LGF V G D+ V PSWR D+E KADLVEE++RI G+D+I++EP Sbjct: 421 IDVPRAEMQQILETLGFHVSGAGDRVTVRPPSWRPDIEGKADLVEEVVRIAGLDRIEAEP 480 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 LP + L++ Q RTR KR LASR +ME V WSF+ + +VLFGGG +L + NP Sbjct: 481 LPPLAGIGRPLLTVMQKRTRLAKRALASRGLMEAVTWSFVPHDDAVLFGGGGADLILANP 540 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I++++S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ AA +R+G + Sbjct: 541 IASELSDMRPSLVPGLLRAAQRNADRGYPDAALFEVGQCFASDEPEGQTIRAAAVRRGGA 600 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 + G+GR W K+ VD FDAKADAL+++ V L+ +G PSW HPGRSG Sbjct: 601 TLAGAGRHWDGKAAT----VDAFDAKADALALLGSLGVPTGGLQITAGGPSWLHPGRSGT 656 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + +G+FGE HP L L + FE+ LD++P+ + K TK K + LS P Sbjct: 657 LRFGPKTEIGWFGEVHPRTLQALDLKGTLVAFEIVLDALPLPKLKPTKAKAALALSEFQP 716 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V + +PAG +V +N +R L+ V VFD+++G + +G KSVAI V +QP+ Sbjct: 717 LSRDFAFVVGRDVPAGDIVKAAQNAERKLVTGVDVFDLYEGPGVPDGAKSVAIAVRLQPV 776 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + RIV V +KT A LR+ Sbjct: 777 ERTLTDAEIEAVSARIVAEVSRKTGATLRA 806 >gi|319898277|ref|YP_004158370.1| phenylalanyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] gi|319402241|emb|CBI75774.1| phenylalanyl-tRNA synthetase beta chain [Bartonella clarridgeiae 73] Length = 804 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/815 (49%), Positives = 559/815 (68%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ SL++ICD LTSIGLEV+ V++R L+ F I K+L+ ++PD D Sbjct: 1 MKFTLSWLKDHLETNASLDEICDKLTSIGLEVDHVEDRSCLTSFLIAKILTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +D G IQVVCGA N R GL+GV A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQILSVDIGSGAPIQVVCGASNARPGLVGVLALPGTYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LSD+ I+EL AP+G Y L DP+I++ LTPNRSDC VRGIA DL Sbjct: 121 SQAELGLSDEDCGIIELSESAPIGMSFVTYAGLDDPVINIGLTPNRSDCTSVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAG+G+LKE+ S P S S +K LD DSSLC GF+ C ++ V+N +P WM+Q Sbjct: 181 AAGMGRLKEL--SLPQLSSSFETLVKVSLDYPQDSSLCLGFSWCEIRNVQNCTSPQWMQQ 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLRS++ALVD+TNY+ D G P HVFDA ++ L+VR GE+ AL+ + Y+ Sbjct: 239 RLNAIGLRSVNALVDVTNYICFDLGRPLHVFDADKLKGKLSVRLGREGEQFQALNGKVYN 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L +N VIA + + +IAGIIGG+ GCD+ T V++E ALWD NIA++G++LG+I+D+ Sbjct: 299 LGVENCVIADEEGVIAIAGIIGGERTGCDEKTCRVIIESALWDSRNIAQTGRSLGLISDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-KP--RKIVFMNSEVKR 413 RYRFERGVD M LK + L+L LCGG AS + + I Y KP ++IVF SE+KR Sbjct: 359 RYRFERGVDPAFMELGLKIAIELVLRLCGGEAS---MTQVIGYQKPEIKEIVFPFSELKR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L+ +++ E+ IL LGF + + + V VP+WR DV ADLVEEI+RIYG+D+I Sbjct: 416 LTNLEIEREEVFIILTHLGFGLEEKGNVVTVKVPTWRLDVFGTADLVEEIMRIYGLDKI- 474 Query: 474 SEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +P+PL ++ + ++ L Q + +R+LA R MME + WSFIS+ Q++ FGGGQ +L Sbjct: 475 -QPIPLKKIAEVKQQTLKFLQIYSHITRRILAYRGMMEAITWSFISENQALAFGGGQAQL 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 +++NPI++DMS MR SLLPGLL A RN+DR +DFA+FEVS++YE DTP+ Q+ +A+GI Sbjct: 534 KLVNPIASDMSVMRPSLLPGLLVAAQRNIDRGFSDFALFEVSNIYEGDTPDKQQNVASGI 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYH 649 R G+ EG+GR W+ + + VD+FDAKADAL+V+E +DS ++ E GAP WYH Sbjct: 594 RCGTEKFEGAGRFWTGNA----KAVDVFDAKADALAVLEA-CGMDSSKVQIEVGAPDWYH 648 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG SG+IK ++++LG+FG FHP+ L+ +S PICGFE++L+ IP +KK TK + + Sbjct: 649 PGCSGVIKLGSKVILGFFGIFHPSTLEKLDVSGPICGFEIFLNQIPGPKKKVTKIRPPLS 708 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RD AF+VD+ I + +V D +LI V VFD+F+ S G +KSVA++ Sbjct: 709 LSPFQMVRRDFAFVVDKEIASSLIVRAASGADKKLIHSVQVFDLFEDPSFGRDRKSVAVE 768 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V IQP++ T D D+ L +I+ENV K T A LR Sbjct: 769 VTIQPIERTLTDKDLEKLSLKIIENVTKITGAYLR 803 >gi|319404996|emb|CBI78605.1| phenylalanyl-tRNA synthetase beta chain [Bartonella sp. AR 15-3] Length = 804 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 397/815 (48%), Positives = 559/815 (68%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ SL++ICD LT+IGLEV++V++R L+ F I K+L+ ++PD D Sbjct: 1 MKFTLSWLKDHLETNASLDEICDKLTAIGLEVDRVEDRSCLTGFVIAKILTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G IQVVCGA N R GL+GV A PG+ +P ++ ++V KIRGIES GMMC Sbjct: 61 LQVLSVDIGSGPHIQVVCGASNARPGLVGVLALPGTYVPGLDVTLSVGKIRGIESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+EL DAP+G Y L DP+ID+ LTPNRSDC GVRGIA DL Sbjct: 121 SQTELGLSNEDCGIIELSKDAPIGMSFITYAGLDDPVIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL---DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A G+GKLK++ S P S S ++ L D SLC GF+ C V+ ++N ++P WM+Q Sbjct: 181 ATGIGKLKKL--SLPQLSSSFETLVQVSLGYPQDLSLCLGFSWCEVRNIQNGMSPQWMQQ 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLRS++ LVD+TNY+S D G P H FDA ++ L VRR GE+ AL+ + Y Sbjct: 239 RLNAIGLRSMNVLVDVTNYISFDLGRPLHAFDADKLKGALVVRRGREGEQFQALNGKVYS 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS +N VIA + + +IAGI+GG+ CD+ T V++E ALWD NIA++G++LG+I+D+ Sbjct: 299 LSFENCVIADEEGVIAIAGIMGGERTSCDEKTRRVIIESALWDSKNIAQTGRSLGLISDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKR 413 RYRFERGVD M L+ + L+L LCGG AS + I YK ++IVF SE+KR Sbjct: 359 RYRFERGVDPAFMESGLEIAIELVLRLCGGEASTTQV---IGYKKPEIKEIVFPFSEIKR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L+ +++ E + +L +LGF + G+ + V VP+WR D+ KADLVEEI+RIYG+D+I Sbjct: 416 LTNLEIEPEQAFTLLIQLGFVIEGKGNVVTVKVPTWRPDIVGKADLVEEIMRIYGLDKI- 474 Query: 474 SEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +P+PL + ++ + Q + +R+LA R MME V WSFIS++Q++ FG GQ +L Sbjct: 475 -QPIPLENFAEIKQKTFTFLQICSYAARRILAYRGMMEAVTWSFISEKQALAFGDGQEQL 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 +++NPI+ DMS MR SLLPGLL A RN++R D A+FEVS+VY D P+ Q+ +A+GI Sbjct: 534 KLVNPIAYDMSVMRPSLLPGLLVAAQRNIERGFLDLALFEVSNVYRGDIPDKQQNVASGI 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYH 649 R G+ EG+GR W+ + + VD+FDAKADA +V+E +DS ++ E GA +WYH Sbjct: 594 RCGTEKFEGAGRFWTGNA----KAVDVFDAKADAFAVLEA-CGMDSSKVQIEVGAANWYH 648 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG SG+IK +++LG+FG FHP+ L+ G+S PICGFE++LD IP ++KK TK + ++ Sbjct: 649 PGCSGVIKLGPKVILGFFGIFHPSTLEKLGVSGPICGFEIFLDRIPETKKKATKIRPPLN 708 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LSS V+RD AF+VD+ + + ++ VD + I V VFD+F+ SLG+ KKSVAI+ Sbjct: 709 LSSFQMVRRDFAFVVDKEVTSSLIIRAASGVDKKFIYSVQVFDLFEDPSLGQDKKSVAIE 768 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V IQP++ T D+D++ L +I+ENV KKT A LR Sbjct: 769 VTIQPIERTLTDEDLKKLSLKIIENVTKKTGAYLR 803 >gi|319406482|emb|CBI80123.1| phenylalanyl-tRNA synthetase beta chain [Bartonella sp. 1-1C] Length = 804 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/815 (48%), Positives = 552/815 (67%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T SL++ICD L +IGLEV+ +++R +L+ F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETSASLDEICDKLVAIGLEVDHIEDRSSLAGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G IQVVCGA N R GL+GV A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDIGSDSPIQVVCGASNARPGLVGVLALPGTYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL L D+ I+EL DAP+G Y L DP+ID+ LTPNRSDC GVRGIA DL Sbjct: 121 SQAELGLFDEDCGIIELSKDAPIGMSFVTYAGLDDPVIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A G+G+LK++ S P S ++ L+ D SLC GF+ C ++ V+N +P WM+Q Sbjct: 181 ATGIGRLKKL--SLPQLSSFFETSVQVSLNYPQDLSLCSGFSWCEIRNVQNGRSPQWMQQ 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLRSI+AL+DITNY+S D G P HVFDA ++ L+VR GE+ AL+ + Y+ Sbjct: 239 RLNAIGLRSINALIDITNYISFDFGRPLHVFDADKLKGKLSVRLGREGEQFQALNGKVYN 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L +N VIA + + +IAGI+GG+ CDD T V++E ALWD NIAR+G++LG+I+D+ Sbjct: 299 LGLENCVIADEEGVIAIAGIMGGERTSCDDKTRRVIIESALWDSKNIARTGRSLGLISDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKR 413 RYRFERGVD M L+ +L CGG AS + I YK +KIVF SE+KR Sbjct: 359 RYRFERGVDPAFMESGLEIAAEFVLRFCGGEASTTQV---IGYKKPEIKKIVFPFSEIKR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L+ +++ E + +L +LGF + G+ D V+VP+WR D+ KADLVEEI+RIYG+D+I Sbjct: 416 LTNLEIGPEQAFTLLTQLGFGLEGKGDVVTVTVPTWRLDIVGKADLVEEIMRIYGLDKI- 474 Query: 474 SEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +P+PL + + ++ + Q + +R+LA R MME + WSFIS+ Q++ FGGGQ +L Sbjct: 475 -QPIPLESLAEVKQKTFTFLQICSHTARRILAYRGMMEAITWSFISENQALAFGGGQAQL 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 +++NPI++DMS MR SLLP LL A RN+DR +DFA+FEVS++YE DTP+ Q+ +A+GI Sbjct: 534 KLVNPIASDMSVMRPSLLPSLLVAAQRNIDRGFSDFALFEVSNIYEGDTPDKQRNVASGI 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYH 649 R G+ EG GR W+ ++ VD+FDAKADA +V+E +DS ++ E GAP WYH Sbjct: 594 RCGTEKFEGGGRFWTGNAKA----VDVFDAKADAFAVLEA-CGMDSNKVQIEIGAPHWYH 648 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG SG+IK +++LG+FG FHP L+ +S PICGFE++LD IP +KK TK + + Sbjct: 649 PGCSGVIKLGPKVILGFFGIFHPTTLEKLCVSGPICGFEIFLDRIPEPKKKVTKIRPSLS 708 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RD AF+VD+ + + +V + D +LI V VFD+F+ SLG KKSVAI+ Sbjct: 709 LSPFQRVRRDFAFVVDKEVASSLIVRAVSGADKKLIHSVQVFDLFEDPSLGHDKKSVAIE 768 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V IQP++ T D+D+ L +I+E+V K T A LR Sbjct: 769 VTIQPMERTLTDEDLEGLTLKIIESVAKTTGAYLR 803 >gi|319407951|emb|CBI81605.1| phenylalanyl-tRNA synthetase beta chain [Bartonella schoenbuchensis R1] Length = 804 Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/811 (49%), Positives = 549/811 (67%), Gaps = 16/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++IC+ LT+IGLEV+ V++ +L+ F +VL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEICNKLTAIGLEVDHVEDYASLAGFVNARVLTAVKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG +QVVCGA N R GL+ V A PG+ +P ++ ++V KIRG++S GMMC Sbjct: 61 LQILSVDTGSSTPVQVVCGASNARAGLVSVLALPGTYVPGLDVTLSVGKIRGVDSFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL L D+ I+ELP DAP+G +DY L+DP+IDV LTPNRSDC GV GIA DL Sbjct: 121 SSAELKLLDEHDGIIELPEDAPLGVPYADYAGLNDPVIDVGLTPNRSDCTGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAG+G+LKE++I P S ++ LD +SLC GF+ V V+N+ +P WM++ Sbjct: 181 AAGIGRLKELSI--PQFDISFETSVQVTLDFFQSTSLCLGFSWREVSNVQNSASPQWMQR 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLR I+ALVDITNY+S D G P HVFDA +I L VR C GE++ AL+ + Y+ Sbjct: 239 RLNAIGLRPINALVDITNYISFDLGRPLHVFDADKIKGALRVRCGCEGEQLQALNGKTYN 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + VIA + + +IAGI+GG CD+ T V++E ALWD +IA++G+ LG+I+D+ Sbjct: 299 LSTKDCVIADEEGVVAIAGIMGGVRTSCDEMTRRVIIESALWDSRSIAQTGRTLGLISDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD M L+ L+L+LCGG S + + ++I F SE+KRL+ Sbjct: 359 RYRFERGVDPAFMESGLEIATQLVLNLCGGEVSKAQVVGYQKPEVKQISFPFSEIKRLTN 418 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 +++ ++ IL++LGF + GE D V VP+WR DV KADLVEE++RIYG+D+I EP Sbjct: 419 LEIERGKAIAILKQLGFGIKGEGDVVTVEVPTWRFDVVGKADLVEEVIRIYGLDKI--EP 476 Query: 477 LPLTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +PL N L+ Q +R +R LA R M+E V+WSFIS+ Q++ FGGGQ +L+++ Sbjct: 477 IPLKDFTGGNNKILTFSQIVSRVARRALACRGMVEAVSWSFISENQALTFGGGQAQLKLV 536 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+ DMS MR SLLPGLL A RNVDR DFA+FEVS +Y+ D P+ Q+ +A GIR+G Sbjct: 537 NPIATDMSVMRPSLLPGLLIAAQRNVDRGFPDFALFEVSSIYKGDAPDEQQCVAGGIRRG 596 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 + EGSGR WS + + VD+FDAKADAL+V+E + + ++ + P WYHPGRS Sbjct: 597 TEKFEGSGRFWSGNA----KTVDVFDAKADALAVLEACGIDISKVQIGTETPDWYHPGRS 652 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G+IK +I+LG+FG FHP+ L+ +S P+CGFEV+LD IP +KK TK + L Sbjct: 653 GVIKLGPKIILGFFGVFHPDTLEKLDVSGPLCGFEVFLDQIPEPKKKATKICSPLKLLPF 712 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 V+RD AF+VD+ I + +VN + D +LI V +FD+F+ SLGE KKSVAI+V IQ Sbjct: 713 QMVRRDFAFVVDKAIASSLIVNAARGADKKLIHSVQIFDLFEDPSLGEDKKSVAIEVAIQ 772 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 P++ T D+D+ L ++VENV K T A LR Sbjct: 773 PVERTLTDEDLEELALKVVENVTKATGACLR 803 >gi|304394034|ref|ZP_07375957.1| phenylalanyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] gi|303293474|gb|EFL87851.1| phenylalanyl-tRNA synthetase, beta subunit [Ahrensia sp. R2A130] Length = 806 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/812 (47%), Positives = 533/812 (65%), Gaps = 14/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R + PFTI KVLS +PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVERLTMIGLEVEAVDDRSSYQPFTIAKVLSAAPHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LQVLSVDIGAADPLQVVCGAPNARAGLVGAFAGPGTYVPGIDVTLGVGNIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELP----IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 SE+EL LS++ I++LP DAPVG +DY L+DP+I++ +TPNR D +GV GIA Sbjct: 121 SERELELSEEHDGIIDLPETVLADAPVGSSFADYAGLNDPVIEIGITPNRPDALGVSGIA 180 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWM 234 DL A+G+G +K + P+ + DL + C F + V+GV+N +P WM Sbjct: 181 RDLAASGMGTVKTPAVPAIEGQGDCPVSV--DLSTAGDFCPAFGLRLVRGVKNGPSPKWM 238 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRLKA+GLR ISALVD+TNY++ DRG P HVFDA ++ L VR A E +L LD +E Sbjct: 239 QQRLKAIGLRPISALVDVTNYITFDRGRPLHVFDADKVKGRLVVRPATGEETMLGLDGKE 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y + + VIA D +S+AGI+GG+ +GC + T +VLVE ALWDP+ +AR+G++LGIIT Sbjct: 299 YTPTAKHYVIADDNGPESLAGIMGGEESGCTETTVNVLVESALWDPLTVARTGRDLGIIT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+RYRFERGVD Q M L ++++ LCGG S IA + I F SE KRL Sbjct: 359 DARYRFERGVDPQFMEAGLDLGTAMVMELCGGEPSKAVIAGEVPTPDLVIEFPLSETKRL 418 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + IDV + + LERLGF+V G D + VP R DV KAD+VEE++R++GVD I+ Sbjct: 419 TSIDVDGDTAKATLERLGFTVGGIGDTLTIGVPGTRPDVHGKADIVEELMRMHGVDNIEP 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +PLP +R L+ Q RTR KR LA+R M E V +SFISK Q+ LFGGG LE+ Sbjct: 479 QPLPALASVGERVLTTPQIRTRLAKRTLATRGMSEAVCYSFISKAQAELFGGGDDALELA 538 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI++DMS+MR SLLP LL A GRNV R + D AIFEVSHVY Q A+GIR+G Sbjct: 539 NPIASDMSHMRPSLLPSLLAAAGRNVARGVGDLAIFEVSHVYRGVEVADQHRAASGIRRG 598 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 ++ +E +GR W ++ V +FDAKADAL+VI + ++ E+G P W HPGRS Sbjct: 599 TAKLEATGRDWQGNTDA----VGVFDAKADALAVIAACGMDPSKVQIEAGGPDWMHPGRS 654 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G +K ++VLGYFGEFHP L+ ++ P+CGFE+++D++P ++K T++K +HLS + Sbjct: 655 GTLKLGPKVVLGYFGEFHPMTLEAMDVTGPLCGFEIFMDAVPEPRRKGTRSKGALHLSPM 714 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 VKRD AF++D+ + A ++ + D +LI DV +FD+F+ SLG KKS+AI+V +Q Sbjct: 715 QAVKRDFAFVLDRDVQATAVLRAAQGADKKLITDVKIFDLFEDASLGADKKSLAIEVTMQ 774 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P + D++I + ++V NV K T LR Sbjct: 775 PAATSLTDEEIDAVAGKVVANVEKTTGGSLRG 806 >gi|220925394|ref|YP_002500696.1| phenylalanyl-tRNA synthetase subunit beta [Methylobacterium nodulans ORS 2060] gi|219950001|gb|ACL60393.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium nodulans ORS 2060] Length = 808 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/812 (48%), Positives = 539/812 (66%), Gaps = 14/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD SLE I +TLT IGLEVE+V+++ A L+ + I V++ E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDASLETIVETLTRIGLEVERVEDKAADLAAYRIAAVITAEQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R G+ V+APPG+ +P N+ ++V IRG+ES GM Sbjct: 61 RLRVCTVDPGDGTAPVQVVCGAPNARAGMRSVFAPPGTYVPGKNITLSVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL LS+D I++LP DAPVG + Y L DP+I+++LTPNR DC GV GIA D Sbjct: 121 LCSGAELGLSEDHDGILDLPADAPVGQPYAAYAGLDDPVIEINLTPNRPDCTGVSGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSE-SIPLEI--KFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 L AAGLG L+ +S PL E + P+ + F D LC F + V+GVRN +P+W+ Sbjct: 181 LAAAGLGTLRREPLS-PLRGEGACPVAVIRDFAPGDEHLCPLFGLRLVRGVRNGPSPDWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RLKA+GLR I+ALVDITN+++ DRG P HVFDA+++ LTVRRA GE+I+ALD + Sbjct: 240 QRRLKAIGLRPINALVDITNFITFDRGRPLHVFDAAKVKGNLTVRRAREGEEIVALDGRS 299 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y L VVIA + +SIAGI+GG H+GCD+ TTDVL+E ALWDP NIA++G+ LGII+ Sbjct: 300 YRLDDGIVVIADEAGPESIAGIMGGTHSGCDEATTDVLIEAALWDPRNIAQTGRRLGIIS 359 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+RYRFERGVD +P L +++ LCGG + +A + R I F +EV+RL Sbjct: 360 DARYRFERGVDPAFTLPGLDLATRMVMELCGGVPTQAAVAGELPDADRVIDFPWTEVRRL 419 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 SG+D+P + LE LGF V G D+ +V PSWR DVE KADLVEEI+RI G+D+I++ Sbjct: 420 SGLDLPRPEMKVTLESLGFHVSGTGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEA 479 Query: 475 EPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 +PLP + R L++ Q RTR KR LA+R ++E V WSFIS+ ++ FGGG+ EL + Sbjct: 480 KPLPRIEAAVIRPVLTVLQKRTRLAKRELAARGLVEAVTWSFISRAEAKAFGGGRPELAL 539 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPI+AD+S+MR SLLPGLL+A RN DR D A+FEV + +D PEGQ AA +R+ Sbjct: 540 ANPIAADLSDMRPSLLPGLLRAAQRNADRGYGDVALFEVGQCFASDEPEGQTIRAAALRR 599 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGR 652 G++ G+GR W + R VD F+AKADAL+++ + L+ +G P W+HPGR Sbjct: 600 GTARFAGAGRHWDGAA----RPVDAFEAKADALALLTALGIPTGGLQVAAGGPDWFHPGR 655 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG ++ +G+FGE HP +L + P+ FE+ LD++P+ + + TK K LS Sbjct: 656 SGTLQFGPRNPIGHFGELHPRVLKALDVKGPVVAFEIVLDALPLPKYRPTKVKPAAKLSD 715 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 P+ RD AF+V + +PAG ++ + DR L+ V VFDV++G +G +KSVA+ V + Sbjct: 716 FQPLSRDFAFVVARDVPAGDILKAAQGADRSLVAGVEVFDVYEGPGIGADQKSVAVAVRL 775 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 QP+ T D +I + RIV V KKT A LR Sbjct: 776 QPVDRTLTDAEIEAVSARIVAEVAKKTGATLR 807 >gi|90420457|ref|ZP_01228364.1| phenylalanyl-tRNA synthetase, beta subunit [Aurantimonas manganoxydans SI85-9A1] gi|90335185|gb|EAS48938.1| phenylalanyl-tRNA synthetase, beta subunit [Aurantimonas manganoxydans SI85-9A1] Length = 804 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/811 (49%), Positives = 538/811 (66%), Gaps = 14/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHLDTD SL +IC+ LT IGLEVE VD+R +PF I +VLS ER+PD D Sbjct: 1 MKFTLSWLKDHLDTDASLAEICERLTMIGLEVETVDDRAVFAPFRIARVLSAERHPDADK 60 Query: 60 CAILRIDTGKH----QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 +L +D G + +QVVCGAPN R G++GV A PG+ +P + +++ +IRG+ES Sbjct: 61 LQVLSVDAGPEVNDGKPLQVVCGAPNARAGMVGVLATPGTYVPGIDTTLSIGRIRGVESH 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GMMCSE+EL LSD I++L DAPVG R +DY +L+DP+I+++LTPNR D GV GIA Sbjct: 121 GMMCSERELELSDSHDGIIDLAADAPVGTRFADYADLADPVIEINLTPNRPDATGVAGIA 180 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL A+G+G LK P+ + + S+ C GFA+C V GV N +P WM+ Sbjct: 181 RDLAASGMGTLKTAAPERIEGEGDCPVALSVE---SATCTGFALCKVSGVANGTSPEWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RLKA+GLR I+ALVDITNYV+ DRG P HVFDA++++ L VR A GE++LALD + Y Sbjct: 238 KRLKAIGLRPINALVDITNYVTFDRGRPLHVFDAAKVAGGLVVRDARDGEEVLALDERTY 297 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 LS VIA D ++SIAGI+GG+H+GCD TTDVL+E ALWDP IAR+G++LGIITD Sbjct: 298 TLSAGMCVIADDKGVESIAGIMGGEHSGCDAATTDVLIESALWDPRAIARTGRSLGIITD 357 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD M P L L+L LCGGT S + + T P IV +E +RL+ Sbjct: 358 ARYRFERGVDPDFMEPGLDLATRLVLDLCGGTPSRRIVVESTTPAPAPIVLPFTETERLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI V + + ILE LGF V E V PSWR D++ KADLVEE++R+ GVD I + Sbjct: 418 GIQVERDRQVAILESLGFKVSPEGKTASVVSPSWRPDIDGKADLVEEVMRLVGVDTIAPQ 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP R L++ Q R R +R LA+R M+E V++SFI + + FGGG L++ N Sbjct: 478 PLPSAGAVGGRILTVPQIRDRAARRALAARGMVETVSYSFIGESHAAAFGGGATALKLEN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PISADMS+MR SLLPGL+ A RN R D A+FEV+ +Y +D P+GQ +A G+R+G+ Sbjct: 538 PISADMSDMRPSLLPGLITAAARNAARGHGDTALFEVAAIYRSDEPDGQLRVAGGLRRGT 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSG 654 + + G GR W+ + V ++DAKADA++ +E + +D L E+ A WYHPGRSG Sbjct: 598 AIMSGGGRSWNGNASA----VSVYDAKADAIAALEAAGAPVDRLMIEAPASDWYHPGRSG 653 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 IK ++VL FGEFHP L S P CGFEV+LD+IP ++K T+TK V+ LS+ Sbjct: 654 RIKLGPKVVLAEFGEFHPKTLKTLDASGPHCGFEVFLDAIPTPKRKATRTKPVLALSAFQ 713 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PV+RD AF+VD + A LV + DR L+ +V VFDVF G +LGE +KSVA++V + P Sbjct: 714 PVRRDFAFVVDADVEALKLVRAAEGADRKLVGEVRVFDVFTGAALGENRKSVALEVTLNP 773 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++ T ++D+ + +IV V K T LR+ Sbjct: 774 VERTLTEEDLEAVSAKIVAQVEKATGGTLRA 804 >gi|254474303|ref|ZP_05087693.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] gi|211956677|gb|EEA91887.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] Length = 807 Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/814 (47%), Positives = 539/814 (66%), Gaps = 19/814 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL++I + LT IGLEVE++ N + L F I +VL E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLDEIVERLTLIGLEVEEITNPADRLGTFKIARVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ +QVVCGAPN R GL+GV+A PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGEGDPLQVVCGAPNARKGLVGVFAKPGDYVPGLDVTLSVGKIRDVESYGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL LSD+ I++LP DAPVG +Y L DP+I++ LTPNRSDC V GIA DL Sbjct: 121 ASERELELSDEHDGIIDLPEDAPVGVPYVEYAGLDDPVIEIGLTPNRSDCASVFGIARDL 180 Query: 179 VAAGLGKLK-----EINISCPLSSESIPLEIKFDLDDS-SLCKGFAMCCVKGVRNNVAPN 232 A+GLG LK +IN S + L++ DL DS C F V+G++N +P Sbjct: 181 AASGLGTLKTPQKTQINAH----SNANDLKVVLDLGDSPEHCPAFGYRVVRGIKNGPSPK 236 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM++RL A+GLR I+ALVDITNY++ D+G P HVFDA ++S LT+R +GE+++ LD Sbjct: 237 WMQKRLVAIGLRPINALVDITNYMTFDQGRPLHVFDADKVSGNLTIRHGKTGEELVGLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + Y + VVI+ D ++S+ GI+GG+ GCD+NT +V++E ALWDP+NIARSG+ LG+ Sbjct: 297 KTYSVDESVVVISDDNGLESLGGIMGGESTGCDENTANVVIESALWDPLNIARSGRKLGV 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEV 411 TD+RYRFERGVD M+ L+ +++ LCGG ASD + + + R I F SEV Sbjct: 357 STDARYRFERGVDPAYMVEGLEVATKMVMDLCGGGEASDTHVVGEVPQEERIIDFPLSEV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 KRLSG++V + IL LGF V G D +VS PSWR DV KADLVEE++RI G+D+ Sbjct: 417 KRLSGLEVSHGEIKAILSLLGFWVAGNGDVVKVSPPSWRPDVHGKADLVEEVMRIVGIDK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + + LP + ++ L++ Q R +R LA+R M E V WSFI K + FGGG L Sbjct: 477 VPTATLPRMEPVSQKVLTVSQIRRSNARRALAARGMDEAVLWSFIPKAHAEHFGGGNPVL 536 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS+DMS+MR SLLPGLL A RN DR AD A+FEV V+END+ +GQK + AGI Sbjct: 537 SLANPISSDMSDMRPSLLPGLLTAAQRNADRGYADVALFEVGQVFENDSEKGQKMVIAGI 596 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHP 650 R+G++ GSGR WS +E +D+FDAKADA +V++ + +L + APS+YHP Sbjct: 597 RRGTAKPTGSGRHWSGNAEN----IDVFDAKADAGAVLQSIGAQVGNLMVFTDAPSYYHP 652 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GRSG +K + L YFGE HP L+ + P+ FEV++D++P +KK TK+K ++ Sbjct: 653 GRSGALKMGPKNTLAYFGEIHPKTLEALDIEGPLVAFEVFIDAVPQPKKKATKSKGALNA 712 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 + L PVKRD AF+VD P L+ K D+ LI +V +FD+++G+ + EG++S+AI V Sbjct: 713 ADLMPVKRDFAFLVDSSTPVEKLLKAAKGADKALITNVNLFDIYEGQGVPEGQRSLAIDV 772 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QP K T D+DI + ++IV +V K T LR Sbjct: 773 TLQPTKKTLTDEDIEAVSNKIVASVQKATGGTLR 806 >gi|163851057|ref|YP_001639100.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] gi|163662662|gb|ABY30029.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] Length = 807 Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/812 (47%), Positives = 537/812 (66%), Gaps = 13/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I ++LT IGLEVE ++++ A L P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAESLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTPYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A GLG LK + P+ E +P+ + FD D LC FA+ V+GV N +P WM+ Sbjct: 181 AATGLGTLKREPMP-PVRGEGPCPVPVTLAFDEHDKGLCPLFALRLVRGVTNGPSPEWMQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 240 KRLRAIGLRPINALVDITNYMTFDRGRPLHVFDAGKVAGGLTVRRAEEGESLVALDGKTY 299 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D VVIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD Sbjct: 300 RLDSDAVVIADGNGVESIAGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITD 359 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+ Sbjct: 360 ARYRFERGVDPAFALPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLA 419 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ + Sbjct: 420 GIELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPK 479 Query: 476 PLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + Sbjct: 480 PLPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALA 539 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ A G+R+G Sbjct: 540 NPIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRG 599 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 ++ GSGR WS +E VD F+AKADAL+++ V L+ +G P W HPGRS Sbjct: 600 TARHAGSGRHWSGAAEA----VDAFEAKADALALLAALGVPTGGLQIVAGGPDWLHPGRS 655 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 656 GTLQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDL 715 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + RD AF+V + +PA ++ + +R LI + VFD+++G + +G KSVA+ V +Q Sbjct: 716 QAISRDFAFVVPRDVPAADILKAAQGAERKLITGIEVFDLYEGAGIPDGSKSVAVAVRLQ 775 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P + T D +I + +IV V KKT A LRS Sbjct: 776 PSERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|188580858|ref|YP_001924303.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] gi|179344356|gb|ACB79768.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] Length = 807 Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 385/812 (47%), Positives = 537/812 (66%), Gaps = 13/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I +TLT IGLEVE ++++ A L P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAISETLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDPGDGQPLQVVCGAPNARTGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLSEDHDGILDLPADAPVGTPYAVWAGLDDPVIEINLTPNRSDCASIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A G+G LK + P+ E P+ ++FD D LC FA+ V+GV+N +P WM+ Sbjct: 181 AATGIGTLKREPMP-PVRGEGACPTPVTLQFDAHDKGLCPLFALRLVRGVKNGPSPEWMQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 240 KRLRAIGLRPINALVDITNYLTFDRGRPLHVFDAKKVAGGLTVRRAEDGESLVALDGKTY 299 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D VVIA D ++SI GI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD Sbjct: 300 RLDSDTVVIADDKGVESIGGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITD 359 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD +P L L++ LCGG+ S IA + I F +EV+RL+ Sbjct: 360 ARYRFERGVDPAFALPGLDLATRLVIDLCGGSPSQATIAGEVPELSHVIDFPWTEVRRLA 419 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ + Sbjct: 420 GIELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPK 479 Query: 476 PLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + V + L++ Q R R KR LASR M+E V +SFI + LFGGG+ +L + Sbjct: 480 PLPRIETVAVEPMLTVLQRRGRLAKRALASRGMLEAVTYSFIPHADARLFGGGKPDLALA 539 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+AD+S+MR SL+PGLL+A N DR D A+FEV + +D PEGQ A G+R+G Sbjct: 540 NPIAADLSDMRPSLVPGLLRAAQANADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRG 599 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 ++ G+GR WS +E VD F+AKADAL+++ V L+ +G P W HPGRS Sbjct: 600 TARHSGAGRHWSGAAE----VVDAFEAKADALALLAALGVPTGGLQIVAGGPDWLHPGRS 655 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G ++ + V+G+FGE HP +L L + FE+ LD++P+ + + TK K + LS L Sbjct: 656 GTLQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDALPLPRHRPTKAKPALALSDL 715 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + RD AF+V + +PA ++ + +R +I + VFD+++G + EG KSVA+ V +Q Sbjct: 716 QAISRDFAFVVPRDVPAADILKAAQGAERKMITGIEVFDLYEGTGIPEGAKSVAVAVRLQ 775 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P + T D +I + +IV V KKT A LRS Sbjct: 776 PSERTLTDAEIEAVSAKIVAEVGKKTGATLRS 807 >gi|240138191|ref|YP_002962663.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens AM1] gi|240008160|gb|ACS39386.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens AM1] Length = 807 Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/812 (47%), Positives = 538/812 (66%), Gaps = 13/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I +TLT IGLEVE ++++ A L P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAETLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTPYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A GLG LK + P+ E +P+ ++FD D LC FA+ V+GV N +P WM+ Sbjct: 181 AATGLGTLKREPMP-PVRGEGPCPVPVTLQFDPHDKGLCPLFALRLVRGVTNGPSPEWMQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 240 KRLRAIGLRPINALVDITNYMTFDRGRPLHVFDAKKVAGGLTVRRAEEGESLVALDGKTY 299 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D VVIA ++SIAGIIGG+ +GCD++TTDVL+E ALWDP NIAR+G+ LGIITD Sbjct: 300 RLDSDAVVIADGNGVESIAGIIGGEASGCDESTTDVLIESALWDPRNIARTGRRLGIITD 359 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+ Sbjct: 360 ARYRFERGVDPAFTLPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLA 419 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ + LE LGF + G D+ +V PSWR DVE +ADLVEEI+RI G+D+I+ + Sbjct: 420 GIELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGRADLVEEIVRIAGLDRIEPK 479 Query: 476 PLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + Sbjct: 480 PLPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALA 539 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ A G+R+G Sbjct: 540 NPIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRG 599 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 ++ GSGR WS +E VD F+AKADAL+++ V L+ +G P W HPGRS Sbjct: 600 TARHAGSGRHWSGAAET----VDAFEAKADALALLAALGVPTGGLQVVAGGPDWLHPGRS 655 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 656 GALQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDL 715 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + RD AF+V + + A ++ + +R LI + VFD+++G + +G KSVA+ V +Q Sbjct: 716 QAISRDFAFVVPRDVAAADILKAAQGAERKLITGIEVFDLYEGAGIPDGSKSVAVAVRLQ 775 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P + T D +I + +IV V KKT A LRS Sbjct: 776 PSERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|170743415|ref|YP_001772070.1| phenylalanyl-tRNA synthetase subunit beta [Methylobacterium sp. 4-46] gi|168197689|gb|ACA19636.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium sp. 4-46] Length = 808 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/812 (47%), Positives = 531/812 (65%), Gaps = 12/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD SL+ I +TLT IGLEVE+V+NR A L+ + I VL+ E +P+ D Sbjct: 1 MKFTLSWLKDHLDTDASLDVIVETLTRIGLEVERVENRAADLAAYRIAAVLTAEPHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R G+ V+APPG+ +P N+ ++V IRG+ES GM Sbjct: 61 RLRVCTVDLGDGAAPVQVVCGAPNARAGMRSVFAPPGTYVPGKNITLSVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL LS+D I++LP DAPVG + Y L DP+I+++LTPNR DC GV GIA D Sbjct: 121 LCSGAELGLSEDHDGILDLPADAPVGETYAAYAGLDDPVIEINLTPNRPDCTGVAGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMR 235 L AAGLG+L+ + P+ + L +D LC F + V+GVRN +P W++ Sbjct: 181 LAAAGLGRLRRETLPTLRGEGPCPVAVTRALAPEDGHLCPLFGLRLVRGVRNGPSPEWLQ 240 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RLKA+GLR I+ALVDITN+++ DRG P HVFDA+++ LTVRRA GE++LALD + Y Sbjct: 241 RRLKAIGLRPINALVDITNFITFDRGRPLHVFDAAKVRGDLTVRRAREGEELLALDGRTY 300 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L VVIA +SIAGI+GG+ +GCD++TTDVL+E ALWDP IAR+G+ LGIITD Sbjct: 301 QLDDGIVVIADAAGPESIAGIMGGEPSGCDESTTDVLIESALWDPRTIARTGRRLGIITD 360 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD +P L +++ LCGG ++ +A R I F +EV+RLS Sbjct: 361 ARYRFERGVDPAFTLPGLDLATRMVIELCGGVPTEATVAGERPETDRVIDFPWTEVRRLS 420 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+D+P + LE LGF V G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ + Sbjct: 421 GLDLPRPEMKVTLEALGFHVSGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPK 480 Query: 476 PLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + R L++ Q RTR KR LA+R ++E V WSFI+K + FGGG+ +L + Sbjct: 481 PLPRVEAAVIRPVLTVLQKRTRLAKRELAARGLVEAVTWSFIAKADAEAFGGGRPDLALA 540 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+AD+S+MR SLLPGLL+A RN DR D A+FEV + +D PEGQ AA +R+G Sbjct: 541 NPIAADLSDMRPSLLPGLLRAGQRNADRGYPDVALFEVGQCFASDAPEGQTMRAAALRRG 600 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 S+ G+GR W + R VD ++AKADAL+++ V + L+ +G P W+HPGRS Sbjct: 601 SARAAGAGRHWDGAA----RPVDAYEAKADALALLTALGVPVGGLQVVAGGPDWFHPGRS 656 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G ++ +G+FGE HP +L + P+ FE+ LD++P+ + + TK K LS Sbjct: 657 GTLQFGPRTPIGHFGEVHPRVLRALDVKGPVVAFEIVLDALPLPKHRPTKVKPAAKLSDF 716 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 P+ RD AF+V + + AG ++ ++ +R L+ VFDV++G +G +KSVA+ V +Q Sbjct: 717 QPLSRDFAFVVGRDVAAGDILRAVQGAERTLVAGAEVFDVYEGPGIGADQKSVAVAVRLQ 776 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P+ T + DI + RIV V KKT A LR Sbjct: 777 PVDRTLTEADIEAVSARIVAEVAKKTGATLRG 808 >gi|146337310|ref|YP_001202358.1| phenylalanyl-tRNA synthetase subunit beta [Bradyrhizobium sp. ORS278] gi|146190116|emb|CAL74108.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) [Bradyrhizobium sp. ORS278] Length = 802 Score = 740 bits (1910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/809 (47%), Positives = 528/809 (65%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD +EK+ D LT IGLEVE ++++ + L+P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDEPVEKLADKLTMIGLEVEHLEDKAKLLAPYKIARVVSAEQHPNAD 60 Query: 60 -CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +DTG +QVVCGAPN R GL+ V++PPG+ IP N+ ++V IRG+ES GM Sbjct: 61 RLRVCMVDTGDGGAPVQVVCGAPNARAGLVSVFSPPGTYIPGKNITLSVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE EL LS++ IMELP DAP+G +++ L DP+ +++LTPNR DC GV GIA D Sbjct: 121 LCSEAELELSENHDGIMELPADAPIGKPYAEWAGLGDPLFEINLTPNRQDCTGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GKLK+ I P+ E P +K ++D LC GFA+ V+GV+N +P W++QR Sbjct: 181 LAAADMGKLKDPGIK-PIKGE-FPCPVKVAVEDEKLCPGFALRLVRGVKNGPSPKWLQQR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L ++GLR I+ALVD+TNY++ DR P HVFDA ++ L VRRA GE +LALD + Y L Sbjct: 239 LASIGLRPINALVDVTNYMTFDRARPLHVFDARKVKGNLVVRRARDGETLLALDGRTYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GCD+ TTDVL+E ALW+ INIA++G+ LGI +D+R Sbjct: 299 DHSMCVIADDAGVESLAGIMGGEASGCDEGTTDVLIESALWNEINIAQTGRKLGINSDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L++ LCGG+ S+ + N R I F +EVKRL+GI Sbjct: 359 YRFERGVDPAFMVPGLEMATKLVIDLCGGSPSENVVVGNAYGDDRIIDFPVAEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +VP + IL LGF++ G +V+VPSWR DV KADLVEEI+R+ GVD++ P Sbjct: 419 EVPFAEMRHILTHLGFTLAGSGPVVKVAVPSWRSDVHGKADLVEEIVRMVGVDKVPMTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q RTR KR LA+R M+E V WSFISK + LFGGG+ EL + NPI Sbjct: 479 ERGDAPRKPVLTQLQLRTRRAKRALAARGMVEAVTWSFISKPAAKLFGGGKPELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+ N DR D AIFEV + D PE Q A+GIR+G + Sbjct: 539 ASDLSDMRPSLLPGLIATVQANADRGFGDAAIFEVGQTFRGDRPEDQFVAASGIRRGIAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 +G GR W+ + +DAK + + SL+ +G P+W HPGRSG I Sbjct: 599 SKGHGRHWTGSQP-----ANAYDAKADAFAVLAAAGAPMSSLQIVAGGPAWMHPGRSGTI 653 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + VLG+FGE HP L+ P+ FEV LD IP ++ K T+ K V+ LS+ PV Sbjct: 654 QMGPQNVLGHFGELHPRTLEALKADGPLVAFEVILDRIPAAKAKPTRAKPVLELSAFQPV 713 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 RD AFIVD+ + AG +V + VD +LI DVTVFDV++GK + +GKKSVAI V +QP Sbjct: 714 SRDFAFIVDRKVKAGDIVKAAQGVDKKLISDVTVFDVYEGKGIEDGKKSVAIAVTLQPRD 773 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + ++ +V KKT LR Sbjct: 774 KTMTDEEIDAVAAKVTADVAKKTGGTLRG 802 >gi|114706201|ref|ZP_01439104.1| phenylalanyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] gi|114539047|gb|EAU42168.1| phenylalanyl-tRNA synthetase beta subunit [Fulvimarina pelagi HTCC2506] Length = 806 Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/813 (48%), Positives = 547/813 (67%), Gaps = 16/813 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL T+ +L +ICD LT+IGLEVE VD+R A + F I +V+S E +PD D Sbjct: 1 MKFTLSWLKDHLQTNATLAEICDRLTAIGLEVESVDDRAAFNAFRIARVVSAEPHPDADK 60 Query: 60 CAILRIDTG----KHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 +L ++ G + + IQVVCGAPN R GL+GV PG +P + + V KIRG+ES Sbjct: 61 LRVLMVEAGPDVNEGKPIQVVCGAPNARKGLVGVLGRPGDYVPGLDTTLGVGKIRGVESF 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GMMCSE+EL LS++ I++LP +APVG R +DY EL+DP+I+++LTPN D +GV GIA Sbjct: 121 GMMCSERELELSEEHDGIIDLPAEAPVGARFADYAELADPVIEINLTPNHPDAMGVAGIA 180 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL A+GLG +K I + + P+ + + + C GFA+ V GV N +P WM+ Sbjct: 181 RDLAASGLGTVKTPPIERIEGTGACPVVVSVE---TGTCHGFALRKVSGVTNGASPEWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RLKA+GLR I+ALVDITNYV+ DR P HVFDA+++ LT+R+A +GEK++ALD + Y Sbjct: 238 KRLKAIGLRPINALVDITNYVTFDRARPLHVFDAAKVHGNLTIRQARAGEKLIALDERTY 297 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L VIA + ++SIAG++GG+ +GCD+ TT+VL+E ALWDP+ AR+G++LGI++D Sbjct: 298 ELDETVCVIADENGVESIAGVMGGEASGCDETTTEVLIESALWDPLATARTGRSLGIVSD 357 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD M P L L+L +CGG AS I + + I F +EV+RL+ Sbjct: 358 ARYRFERGVDPAQMEPGLDLATKLVLEICGGEASKRVIEGVVPIEMSIIDFPYTEVRRLT 417 Query: 416 GIDVPIEDSLRILERLGFSV-IGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G+DV E ILE LGF V G+ D V+VP+WR D++ KADLVEE++RI GVD+I Sbjct: 418 GLDVAPERQRAILEGLGFEVEAGKSDADVRVTVPTWRPDIDGKADLVEEVMRIVGVDEIM 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 EPL + R L+L Q R R +R LA+R M+E V ++FI +E + FGGG L + Sbjct: 478 PEPLAAPGSVNTRILTLAQIRERAARRALATRGMVEAVTYTFIPREHAEAFGGGSNALRL 537 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPIS+DMS+MR SLLPGL+ + RN R D AIFEV+ VY+ DTP QK +A G+R+ Sbjct: 538 TNPISSDMSDMRPSLLPGLISSAARNAARGHGDAAIFEVAGVYQGDTPGDQKRVAGGVRR 597 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGR 652 G++ +EG GR WS + V ++DAKADALSV+E ++ L + A +WYHPGR Sbjct: 598 GTARLEGPGRAWSGAASA----VSIYDAKADALSVLEAAGAPVERLMIDREASAWYHPGR 653 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG +K ++VL FGEFHP +L + P CGFEV+LD++P ++K TKTK V+ +S+ Sbjct: 654 SGRLKLGPKVVLAEFGEFHPKVLKQLDAAGPHCGFEVFLDALPEPKRKATKTKPVLDIST 713 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 L PV+RD AF+V + A ++ D +LI++V VFDVF G +LGEG KSVAI+V + Sbjct: 714 LQPVRRDFAFVVGSEVEAEAIIKAAAGADKKLINEVRVFDVFTGGALGEGNKSVAIEVAL 773 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 QP + T ++D+ + D+IV NV + T LR+ Sbjct: 774 QPTERTLTEEDLETVSDKIVANVERATGGSLRA 806 >gi|90421968|ref|YP_530338.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB18] gi|90103982|gb|ABD86019.1| phenylalanyl-tRNA synthetase beta subunit [Rhodopseudomonas palustris BisB18] Length = 803 Score = 739 bits (1907), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/810 (48%), Positives = 535/810 (66%), Gaps = 13/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+LSWLKDHLDTD SLE++ D LT IGLEVE ++++ + L PF+I +++S E++P+ D Sbjct: 1 MKFSLSWLKDHLDTDESLERLADKLTMIGLEVEGIEDKAKLLKPFSIAQIISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + +QVVCGAPN R GL V+A PG+ IP + ++V IRG+ES GMM Sbjct: 61 RLRVCKVDTGAAEPLQVVCGAPNARAGLKTVFAAPGTYIPAKDFTISVGTIRGVESQGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L D I+ELP DAPVG +++ +L DP++D++LTPNR DC GVRGIA DL Sbjct: 121 CSAGELALPDGIDGIIELPTDAPVGVSYAEWAKLGDPVLDINLTPNRQDCAGVRGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AA +G+L + I P+ E P +K ++D LC GFAM V+GV+N +P W++QRL Sbjct: 181 AAADMGRLIDHAIK-PIRGE-FPCPVKVAVEDDKLCPGFAMRLVRGVKNGPSPEWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 ++GLR I+ALVDITNY++ DR P HVFDA+++ LTVR A GE +LALD + Y L Sbjct: 239 TSIGLRPINALVDITNYLTFDRARPLHVFDAAKVKGDLTVRHARDGETLLALDGKTYTLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + ++S+AGI+GG+ +GC + TTDVL+E ALW+ INIA++G+ LGI +D+RY Sbjct: 299 SKVCVIADETGVESLAGIMGGEASGCSNETTDVLIESALWNEINIAQTGRRLGINSDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M+P L+ L+L CGG+ S+I + N R I F +EVKRL+GID Sbjct: 359 RFERGVDPAFMVPGLELATKLVLEFCGGSPSEIVVVGNAFGDDRLIDFPLAEVKRLAGID 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V + ++ RIL RLGF V G +V++PSWR DV+ KAD+VEEI+RI GVD++ P Sbjct: 419 VALPEARRILSRLGFMVAGSGQTVKVAIPSWRSDVQGKADIVEEIVRIVGVDKVPLTPFE 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 K L+ Q RTR KR LA+R ++E V WSFISK Q+ LFGGGQ EL + NPI+ Sbjct: 479 RGDAPRKPVLTPIQLRTRRAKRALAARGLVEAVTWSFISKPQAELFGGGQPELALANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 AD+S+MR SLLPGL+ A N DR +D A+FEV V++ D P+ Q A+G+R G + Sbjct: 539 ADLSDMRPSLLPGLIAAAQTNADRGNSDLALFEVGQVFKGDRPQDQLVAASGVRHGFASS 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA--PSWYHPGRSGI 655 G GR WS + D D KADA +V+ + +L+ +G P+W HPGRSG Sbjct: 599 AGLGRHWSGSAA-----ADALDVKADAFAVLAAAGCPMQALQIVTGKALPAWLHPGRSGA 653 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I+ + VLGYFGE HP L+ P+ FEV LD+IP ++K T+ K + LS+ HP Sbjct: 654 IQIGPQNVLGYFGELHPRALEALHADGPLLAFEVILDNIPDGKQKPTRAKPTLELSAFHP 713 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD AFIVD+ + AG +V + VD +LI V+VFDV++GK + E KKSVAI V IQP Sbjct: 714 VSRDFAFIVDRSVRAGDIVRAAQAVDKKLITGVSVFDVYEGKGIDEAKKSVAIAVTIQPR 773 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT LR Sbjct: 774 DKTLTDQEIDAIGSKIVAEVTKKTGGSLRG 803 >gi|299133286|ref|ZP_07026481.1| phenylalanyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] gi|298593423|gb|EFI53623.1| phenylalanyl-tRNA synthetase, beta subunit [Afipia sp. 1NLS2] Length = 806 Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/812 (47%), Positives = 530/812 (65%), Gaps = 16/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT +EK+ +TLT IGLEVE ++++ +AL+P+ I KV++ E++P+ D Sbjct: 1 MKFTLSWLKEHLDTTEPVEKLAETLTMIGLEVEHLEDKAKALAPYVIAKVITAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DTG+ IQVVCGAPN R GL+ V+APPG+ IP ++ + + IRG+ES GM+ Sbjct: 61 RLRVCMVDTGEGAPIQVVCGAPNARAGLVSVFAPPGTYIPGKDITLGIGNIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I+ELP DAPVG +++ L DP+I+++LTPNR+D GV GIA DL Sbjct: 121 CSAAELELSEDHDGIIELPGDAPVGKPYAEWAGLGDPVIEINLTPNRADATGVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AA +GK + + P + ++D++LC GFA+ V+GV+N +P W+++RL Sbjct: 181 GAADMGKFHNDAPKPIKGTFAAPAAVT--VEDATLCPGFALRLVRGVKNGPSPEWLQRRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 ++GLR I+ALVDITN+++ DRG P HVFDA+++ L VRRA +GE ++ALD + Y L Sbjct: 239 TSIGLRPINALVDITNFMTFDRGRPLHVFDAAKVKGSLVVRRAKAGESLVALDGKTYALD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D ++S+AGI+GG+ GCD+NTTDVL+E ALW+ INIA++G+ LGI +D+RY Sbjct: 299 NTMCVIADDTGVESLAGIMGGEATGCDENTTDVLIESALWNEINIAQTGRKLGINSDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M+P L+ L+L +CGG S+I + R I F EVKRLSGID Sbjct: 359 RFERGVDPAFMVPGLELATKLVLDICGGEPSEIALTGKPYGDDRMIEFPIDEVKRLSGID 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP+ D R L LGF V G+ +++VPSWR DV KAD+VEEI+RI GVD++ P P Sbjct: 419 VPLTDIKRHLTHLGFMVAGQGPVVKIAVPSWRADVTGKADIVEEIVRIIGVDRVPLTPFP 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 K L+ Q RTR KR LA+R M+E V WSF+SK Q+ LFGGG+ EL + NPI+ Sbjct: 479 RGDAPRKPVLTALQLRTRRAKRALAARGMVEAVTWSFLSKTQAELFGGGKPELALANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 +D+S+MR SL+PGL+ A N DR D A+FEV V+ D PE Q A G+R+ + Sbjct: 539 SDLSDMRPSLVPGLIAAAQANADRGFGDVALFEVGQVFLGDQPEQQFTAATGVRRAMASS 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVI----EPFVSLD--SLRFESGAPSWYHPGR 652 +G GR WS VD FDAKADAL+V+ P +L R AP W HPGR Sbjct: 599 KGFGRAWSGSWT-----VDAFDAKADALAVLAACGAPMQALQIVPCREAKNAPQWLHPGR 653 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S I+ + VLG+FGE HP +LD P+ FEV LD +P + + T+ K + L++ Sbjct: 654 SATIQIGPQNVLGHFGELHPRVLDALKADGPLVAFEVLLDRLPEPKARATRAKPQLELAA 713 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 PV RD AF+ D ++ A ++ + VD +LI DVT+FDV+ GK + EGKKSVAI V + Sbjct: 714 FQPVSRDFAFLTDHNVKAADIIRAAQGVDKKLITDVTLFDVYDGKGIPEGKKSVAIAVTL 773 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 QP + T D DI + +IV V KKT + LR Sbjct: 774 QPREKTLTDQDIEAVATKIVAEVTKKTGSTLR 805 >gi|254560751|ref|YP_003067846.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens DM4] gi|254268029|emb|CAX23900.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens DM4] Length = 807 Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/812 (47%), Positives = 536/812 (66%), Gaps = 13/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I ++LT IGLEVE ++++ A L P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAESLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTAYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A GLG LK + P+ E +P+ + FD D LC FA+ V+GV N +P WM+ Sbjct: 181 AATGLGTLKREPMP-PVRGEGPCPVPVTLAFDEHDKGLCPLFALRLVRGVTNGPSPEWMQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 240 KRLRAIGLRPINALVDITNYMTFDRGRPLHVFDAGKVAGGLTVRRAEEGESLIALDGKTY 299 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + VVIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD Sbjct: 300 RLDSEAVVIADANGVESIAGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITD 359 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+ Sbjct: 360 ARYRFERGVDPAFALPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLA 419 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ + Sbjct: 420 GIELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPK 479 Query: 476 PLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + Sbjct: 480 PLPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALA 539 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PE Q A G+R+G Sbjct: 540 NPIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPECQSLRATGLRRG 599 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 ++ GSGR WS +E VD F+AKADAL+++ V L+ +G P W HPGRS Sbjct: 600 TARHAGSGRHWSGAAEA----VDAFEAKADALALLAALGVPTGGLQIVAGGPDWLHPGRS 655 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 656 GTLQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDL 715 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + RD AF+V + +PA ++ + +R LI + VFD+++G + +G KSVA+ V +Q Sbjct: 716 QAISRDFAFVVPRDVPAADILKAAQGAERKLITGIEVFDLYEGTGIRDGSKSVAVAVRLQ 775 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P + T D +I + +IV V KKT A LRS Sbjct: 776 PSERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|254503425|ref|ZP_05115576.1| phenylalanyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] gi|222439496|gb|EEE46175.1| phenylalanyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] Length = 805 Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/809 (47%), Positives = 531/809 (65%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKD+LDTD SLE I D L IGLEVE+V NR + L PF I KVL E++P+ D Sbjct: 1 MKFTLSWLKDYLDTDASLEDILDRLNMIGLEVEEVTNRADRLKPFKIAKVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGDGEPVQVVCGAPNARAGLVGVLGKPGDYVPGLDVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG +++ L +P+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSDEHDGIIDLPDDAPVGVNYAEWAGLDEPVIEIGLTPNRPDCTGVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLGKLKE + + P+++KFD D+ +CK F + VKGV+N +P W++ R Sbjct: 181 AAAGLGKLKERSHEQIRGAYPCPVDVKFDFGDTKPMCKAFGLRMVKGVKNGPSPQWLQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ LVDITNY++ D+G P HVFDA ++ L VRR +GEKI L+ + YD+ Sbjct: 241 LTAIGLRPINILVDITNYITFDQGRPLHVFDADKVHGNLVVRRGQAGEKIDGLNAKSYDV 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+ GI+GG+ +GC ++T +VL+E ALWD IA +G+ LG+ TD+R Sbjct: 301 DGTVCVIADDNGVESLGGILGGEPSGCTEDTANVLIESALWDEDGIAATGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L++ L+L LCGG S+ +I I F SE+KRLSGI Sbjct: 361 YRFERGVDPDYMMPGLEYATRLVLDLCGGEPSETIRTGDIPDSTNIIDFPYSEIKRLSGI 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ ++ L+ LGF + G D +V+ PSWR D+E KADLVEE+ RI G+D++ S PL Sbjct: 421 DLAPAEANVTLKALGFWISGSGDTVKVAAPSWRPDIEGKADLVEEVTRIVGLDRVPSTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P K L+ Q R +R LA+R E V WSFI KE +VLFGGG L + NPI Sbjct: 481 PRLGTVAKTVLTPGQIRRNKTRRALAARGFNESVTWSFIPKEHAVLFGGGNETLALANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S +MS+MR SLLPGL A RN DR D A+FE+ V+E+DTPEGQK +AAG+R+G++ Sbjct: 541 SPEMSDMRPSLLPGLFMAAQRNADRGYGDVALFEIGQVFESDTPEGQKIVAAGVRRGTAK 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGII 656 + GSGR W S+ VD+FDAKADA + + + +D L+ + AP +HPGRSG + Sbjct: 601 LSGSGRHWFGTSDA----VDVFDAKADAEAALAAIGAPVDKLQVFTDAPDTFHPGRSGCL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + L FGE HP IL + P+ FE++LD++P + K ++K ++ S L PV Sbjct: 657 KLGPKNTLAVFGEVHPRILQKMDIEGPLVAFEIHLDALPQPKAKAGRSKGSLNASDLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF+VD + A ++ + D+ LI+D+++FD+++G + EG+KSVAI V++QP K Sbjct: 717 RRDFAFLVDSAVTADKILKAARGADKSLIEDISLFDIYEGTGVPEGQKSVAIDVVLQPRK 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +++ NV K T LR Sbjct: 777 KTLTDEEIDAVSKKVIANVEKATGGTLRG 805 >gi|86747174|ref|YP_483670.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris HaA2] gi|86570202|gb|ABD04759.1| phenylalanyl-tRNA synthetase beta subunit [Rhodopseudomonas palustris HaA2] Length = 802 Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/809 (48%), Positives = 529/809 (65%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHLDTD L+ + D LT IGLEVE ++++ +AL+PFTI VL+ E++P+ D Sbjct: 1 MKLTLSWLKDHLDTDEQLDALADKLTMIGLEVEGIEDKAKALAPFTIALVLTAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DTG +QVVCGAPN R GL+ V+APPG+ IP + + + IRG+ES GM+ Sbjct: 61 KLQVCSVDTGAGAPVQVVCGAPNARAGLVTVFAPPGTFIPAKAITLGIGNIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I+ELP DAP+G +++ L DP++D++LTPNR DC G+ GIA DL Sbjct: 121 CSAAELELSEDHDGIIELPADAPIGQGFAEWAGLGDPVLDINLTPNRQDCAGISGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+GK K +I P+ + P +K ++D LC GFA+ V+GV+N +P+W++QRL Sbjct: 181 AAAGMGKFKNPSIK-PIKGD-FPCPVKVSVEDDKLCPGFALRLVRGVKNGPSPDWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITN+++ DR P HVFDA+++S L VRRA GE +LALD + Y L Sbjct: 239 TAIGLRPINALVDITNFLTFDRSRPLHVFDAAKVSGDLVVRRAKDGETLLALDGRSYTLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P+ VIA ++S+AGI+GG+ +GC D+TTDVL+E ALW+ INIA+SG+ LGI TD+RY Sbjct: 299 PNVCVIADAHGVESLAGIMGGEASGCSDDTTDVLIESALWNEINIAQSGRRLGINTDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M+P L L++ CGGT S+ + R I F SEVKRL+GI+ Sbjct: 359 RFERGVDPAFMVPGLDLATHLVMQFCGGTPSEAVVVGKAFGDDRIIDFPLSEVKRLAGIE 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP + RIL LGF V G +V+VPSWR DV KAD+VEEI+RI GVD++ P Sbjct: 419 VPFVEVRRILTHLGFMVAGSGAVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPMTPFE 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 K L+ Q+RTR KR LA+R + E V WSFISK + FGGGQ EL + NPI+ Sbjct: 479 RGDAPRKPVLTQIQTRTRRAKRALAARGLTEAVTWSFISKPSAEAFGGGQPELALANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 AD+S+MR SLLPGL+ A N DR I D A+FEV +++ D P+ Q A+G+R+G + Sbjct: 539 ADLSDMRPSLLPGLIAAAQANADRGIPDLALFEVGQIFKGDRPQDQFIAASGVRRGVASA 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGA-PSWYHPGRSGII 656 +G GR WS ++ DAKADA +V+ + + L+ + P+W HPGRSG I Sbjct: 599 QGLGRHWSGSAQASA-----LDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGAI 653 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + VLGYFGE HP +L+ P+ FEV LD IP ++++ T+ K + LS+ PV Sbjct: 654 QIGPQNVLGYFGELHPRVLEQLHADGPLVAFEVLLDKIPDAKQRPTRAKPALELSAFQPV 713 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 RD AFIVD+ + A LV + +D +LI V VFDV++GK + KKS+AI V +QP Sbjct: 714 SRDFAFIVDRKVAAADLVRAAQGIDKKLITSVGVFDVYEGKGIDTDKKSIAIAVTLQPRD 773 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT VLR Sbjct: 774 KTMTDQEIDAVGAKIVAEVTKKTGGVLRG 802 >gi|91974644|ref|YP_567303.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisB5] gi|91681100|gb|ABE37402.1| phenylalanyl-tRNA synthetase beta subunit [Rhodopseudomonas palustris BisB5] Length = 824 Score = 735 bits (1897), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/811 (48%), Positives = 530/811 (65%), Gaps = 14/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHLDTD +L + D LT IGLEVE + D +AL+PFTI +VLS E++P+ D Sbjct: 21 MKLTLSWLKDHLDTDETLTALADKLTMIGLEVEDITDKAKALAPFTIARVLSAEKHPNAD 80 Query: 60 -CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +DTG +QVVCGAPN R GL+ V++PPG+ IP N+ + V IRG+ES GM Sbjct: 81 KLQVCSVDTGDGGAPVQVVCGAPNARAGLITVFSPPGTFIPGKNITLGVGNIRGVESRGM 140 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D IMELP DAP+G +++ L DP++D++LTPNR DC GV GIA D Sbjct: 141 LCSAAELQISEDHDGIMELPADAPIGKAYAEWAGLGDPVLDINLTPNRQDCAGVHGIARD 200 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GKLKE I P+ E P ++ ++D LC GFA+ V+GV+N +P W+++R Sbjct: 201 LAAADMGKLKESGIK-PIKGE-FPCPVQVSVEDDKLCPGFALRLVRGVKNGPSPEWLQKR 258 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITN+++ DR P HVFDA+++ L VRRA GE +LALD + Y+L Sbjct: 259 LTAIGLRPINALVDITNFLTFDRSRPLHVFDAAKVKGNLVVRRARDGETLLALDGRNYNL 318 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P VIA D ++S+AGI+GG+ +GC TTDVL+E ALW+ INIA+SG+ LGI TD+R Sbjct: 319 DPGVCVIADDHGVESLAGIMGGEASGCSAETTDVLIESALWNEINIAQSGRKLGINTDAR 378 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L L++ CGGT S++ + R I F SEVKRL+GI Sbjct: 379 YRFERGVDPAFMVPGLDLATRLVIEFCGGTPSEMVVVGRTFGDDRIIDFPLSEVKRLAGI 438 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DVP+ ++ RIL LGF V G+ +V+ PSWR DV KAD+VEEI+RI GVD++ P Sbjct: 439 DVPLAEARRILTHLGFMVAGQGAVVKVAAPSWRSDVHGKADIVEEIVRIVGVDKVPMTPF 498 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q+RTR KR LA+R + E V WSFI+K + FGGGQ EL + NPI Sbjct: 499 ERGDAPRKPVLTPIQTRTRRAKRALAARGLTEAVTWSFIAKPSAEAFGGGQPELALANPI 558 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+ A N DR D A+FEV +++ D P+ Q A+G+R+G + Sbjct: 559 ASDLSDMRPSLLPGLVAAAQANADRGTPDLALFEVGQIFKGDRPQDQFVAASGVRRGVAS 618 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGA--PSWYHPGRSG 654 G GR WS + DAKADA +V+ + + L+ +G P+W HPGRSG Sbjct: 619 SNGLGRHWSGSAPASA-----LDAKADAFAVLAAAGAPMAGLQIATGKALPAWLHPGRSG 673 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 I+ + VLGYFGE HP +L+ P+ GFEV LD+IP ++++ T+ K + LS+ Sbjct: 674 AIQIGPQNVLGYFGELHPRVLEQLHADGPLVGFEVILDNIPAAKQRPTRAKPSLELSAFQ 733 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PV RD AFIVD+ + A +V +++D +LI V VFDV++GK + KKSVAI V +QP Sbjct: 734 PVSRDFAFIVDRKVQAADIVRAAQSIDKKLISSVVVFDVYEGKGVDPDKKSVAIAVSLQP 793 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT VLR Sbjct: 794 RDKTMTDQEIDAVGAKIVAEVTKKTGGVLRG 824 >gi|75674264|ref|YP_316685.1| phenylalanyl-tRNA synthetase subunit beta [Nitrobacter winogradskyi Nb-255] gi|91208123|sp|Q3SWK8|SYFB_NITWN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|74419134|gb|ABA03333.1| phenylalanyl-tRNA synthetase beta subunit [Nitrobacter winogradskyi Nb-255] Length = 812 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/823 (47%), Positives = 531/823 (64%), Gaps = 30/823 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD LEK+ D LT IGLEVE + D + +PFTI +V+S ++P+ D Sbjct: 1 MKFTLSWLKDHLDTDEPLEKLADKLTMIGLEVEHIADKSKTFAPFTIARVVSAVQHPNAD 60 Query: 60 -CAILRIDTGKHQE------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + +DTG+ + IQVVCGAPN R GL+ V+APPG+ IP N+ + V IRG+ Sbjct: 61 RLRVCMVDTGETSDKGDPSYIQVVCGAPNAREGLISVFAPPGTHIPGKNITLGVGTIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS EL +SDD I+ELP DAPVG +++ L DP+I+++LTPNR DC GV Sbjct: 121 ESRGMLCSAAELEISDDHDGIIELPADAPVGAGYAEWAGLGDPVIEINLTPNRQDCTGVH 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA DL AA +G+ K+ I P++ E P +K ++D+SLC GFA+ V+GV+N +P Sbjct: 181 GIARDLSAADMGRFKDPTIK-PVTGE-FPCPVKVTVEDASLCPGFALRMVRGVKNGPSPE 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W+++RL ++GLR I+ALVDITN+++ DR P HVFDA ++ LT+RRA GE + ALD Sbjct: 239 WLQKRLTSIGLRPINALVDITNFMTYDRARPLHVFDAKKVHGDLTIRRARDGETLKALDG 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + Y L P+ VIA D ++S+AGI+GG+ GCD+ TTDVL+E ALW INIA++G+ LGI Sbjct: 299 RIYTLDPNVCVIADDKGVESLAGIMGGEETGCDETTTDVLIESALWSEINIAQTGRRLGI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD M+P L+ L++ LCGG+ S+ +A + R I F SE+K Sbjct: 359 NSDARYRFERGVDPAFMVPGLEMATRLVMELCGGSPSENVVAGQALPEDRVIDFPLSEIK 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL+ IDVP+ + RIL LGF V G +V++P+WR DV+ KADLVEEI+RI GVD++ Sbjct: 419 RLAAIDVPLVEVRRILGHLGFMVAGSGPVVKVAIPTWRTDVQGKADLVEEIVRIVGVDKV 478 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P + K L+ QSRTR +R LA+R M+E VNWSFIS+ Q+ LFGGG EL Sbjct: 479 PMTPFDRGEAPRKPVLTSIQSRTRKARRALAARGMVEAVNWSFISRTQAELFGGGSSELA 538 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI++D+S+MR SLLPGL+ N DR AD A+FEV ++ D P+ Q AAG+R Sbjct: 539 LANPIASDLSDMRPSLLPGLVAIAQANADRGFADVALFEVGQIFRGDGPQDQFMAAAGLR 598 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAK----------ADALSVIEPFVSLDSLRFES 642 +G + G GR WS + + DAK + ++ S +S F Sbjct: 599 RGIASSAGLGRHWSGSAT-----ANALDAKADAFAVLAAAGAPAAALQIATSHESKNF-- 651 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 P+W HPGRS I+ VLGYFGE HP +LD P+ GFEV LD IP +++K T Sbjct: 652 --PAWLHPGRSAAIQIGPHNVLGYFGELHPRVLDELKAEGPLLGFEVILDRIPEAKQKPT 709 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEG 761 + K V+ L + PV RD AFIVD+ + A +V +NVDR L+ VTVFD+++GK + Sbjct: 710 RAKPVLELPAFQPVSRDFAFIVDRTVKAADIVRAAQNVDRKLVSGVTVFDIYEGKGIDAD 769 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KKSVAI V +QP TF D +I + +IV V K+T LR Sbjct: 770 KKSVAIAVRLQPRDRTFTDQEIEAVAGKIVAEVAKRTGGSLRG 812 >gi|27375816|ref|NP_767345.1| phenylalanyl-tRNA synthetase subunit beta [Bradyrhizobium japonicum USDA 110] gi|41018342|sp|Q89WI2|SYFB_BRAJA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|27348954|dbj|BAC45970.1| phenylalanyl-tRNA synthetase beta chain [Bradyrhizobium japonicum USDA 110] Length = 802 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/809 (47%), Positives = 534/809 (66%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD L+++ + LT IGLEVE ++++ +AL PFTI +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETDEPLDRLAEKLTMIGLEVENIEDKAKALKPFTIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +DTG +QVVCGAPN R GL+ V++ PG+ IP ++ + V IRG+ES GM Sbjct: 61 RLRVCMVDTGDGGAPVQVVCGAPNARAGLVSVFSAPGTYIPGKDITLGVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D IMELP DAP+G +++ L DP+++++LTPNR DC GV GIA D Sbjct: 121 LCSAAELQISNDHDGIMELPADAPIGAAYAEWAALGDPVVEINLTPNRQDCTGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GK K+ I P+ E P +K ++D++LC GFA+ V+GV+N +P W+++R Sbjct: 181 LAAADMGKFKDPTIK-PVKGE-FPCPVKVTVEDATLCPGFALRLVRGVKNGPSPEWLQKR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITN+++ DR P HVFDA ++ L VRRA GE +LALD + Y+L Sbjct: 239 LTAIGLRPINALVDITNFMTYDRARPLHVFDARKVKGNLVVRRARDGETLLALDGRTYNL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P VIA + ++S+AGI+GG+ +GCD+NTTDVL+E ALW+ INIA++G+ LGI +D+R Sbjct: 299 DPATCVIADEHGVESLAGIMGGEASGCDENTTDVLIESALWNEINIAQTGRKLGINSDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L++ +CGG S+ + R I F +EVKRLSGI Sbjct: 359 YRFERGVDPAFMVPGLELATKLVMEMCGGAPSENVVVGKAFGDDRVIDFPVTEVKRLSGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +VP + RIL LGF + G +V+VPSWR DV KAD+VEEI+RIYGVD++ P Sbjct: 419 EVPQPEMKRILTHLGFMMAGPGPVVKVAVPSWRTDVHGKADIVEEIVRIYGVDKVPMTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q RTR +R LASR ++E V WSFI+K + LFGGGQRELE+ NPI Sbjct: 479 ERGDDARKPVLTPLQLRTRRARRALASRGIIEAVTWSFITKSAAKLFGGGQRELEVANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR +LL GL+ A N DR D A+FEV V++ D P+ Q A+G+R+G + Sbjct: 539 ASDLSDMRPTLLAGLIAAAQANADRGFGDVALFEVGQVFKGDRPQDQFMAASGVRRGFAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 EG GR WS + DLFD + + +L+ +G P W HPGRSG I Sbjct: 599 SEGLGRHWSGSVQ-----ADLFDAKADALAVLAAAGAPMQALQIVAGGPGWLHPGRSGTI 653 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + VLGYFGE HP L+ G P+ FEV LD +P ++K+ T+ K ++ LS+ PV Sbjct: 654 QIGPQNVLGYFGEMHPRALEALGADGPLMVFEVILDRVPEAKKRPTRAKPLIELSAFQPV 713 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 RD AFIVD+ + AG +V + VD +LI V VFDV++GK + +GKKS+AI V IQP + Sbjct: 714 SRDFAFIVDRTVKAGDIVRAAQGVDKKLITGVNVFDVYEGKGIDDGKKSIAIAVTIQPRE 773 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + ++V V KKT LR+ Sbjct: 774 KTLTDQEIEAVAAKVVAEVTKKTGGTLRA 802 >gi|118589628|ref|ZP_01547033.1| phenylalanyl-tRNA synthetase beta subunit [Stappia aggregata IAM 12614] gi|118437714|gb|EAV44350.1| phenylalanyl-tRNA synthetase beta subunit [Stappia aggregata IAM 12614] Length = 805 Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/809 (46%), Positives = 535/809 (66%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+TD SLE+I + LT IGLEVE+V NR + L PF I KVL E++P+ D Sbjct: 1 MKFTLSWLKEHLETDASLEEIVERLTLIGLEVEEVTNRADRLKPFKIAKVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ +QVVCGAPN R GL+GV PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGEGDPVQVVCGAPNARAGLVGVLGKPGDYVPGLDVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LS++ I++LP DAPVG +++ L +P+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSNEHDGIIDLPADAPVGMAYAEWAGLDEPVIEIGLTPNRPDCTGVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLGKLKE + + P+++ D + +CK F + VKGV+N +P W++ R Sbjct: 181 AAAGLGKLKERSNEQVRGTFPCPVDVTLDFGHTKPMCKAFGLRLVKGVKNGPSPKWLQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ LVD+TNY++ D+G P HVFDA ++ L VRR GE I L+ + Y++ Sbjct: 241 LTAIGLRPINTLVDMTNYITFDQGRPLHVFDADKVHGNLVVRRGKPGETIDGLNGKTYEI 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VI+ D ++S+ GI+GG+ +GC + T +VL+E ALWD +IA +G+ LG+ TD+R Sbjct: 301 DDTVCVISDDNGVESLGGILGGEPSGCTEETVNVLIESALWDEDDIAATGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L++ ++L LCGG AS+ A ++ + I F SE+KRLSG+ Sbjct: 361 YRFERGVDPDYMMPGLEYATRMVLELCGGEASETVQAGSVPETSKIIEFPYSEIKRLSGV 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DV ++ L+ LGF V G D +V+ PSWR D+E KADLVEE++RI G+D++ PL Sbjct: 421 DVQPAEANVTLKSLGFWVSGSGDTVKVAAPSWRPDIEGKADLVEEVVRIIGLDRVPFTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P T ++ L+ Q R +R LA+R E V WSFI+K+ + LFGGG L + NPI Sbjct: 481 PRTGTVGQKVLTTGQIRRNKARRALAARGFNEAVTWSFIAKDHAELFGGGSAALALANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S +MS+MR SLLPGLL A RN DR + A+FEV V+ENDTPEGQK +A G+R+GS+ Sbjct: 541 STEMSDMRPSLLPGLLVAAQRNADRGYGNVALFEVGQVFENDTPEGQKMVATGVRRGSAK 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGII 656 ++G+GR WS S+ VD+FDAKADA + + + +D L + AP+ +HPGRSG + Sbjct: 601 LQGAGRHWSGVSQT----VDVFDAKADAEAALAAIGAPVDKLMVSADAPATFHPGRSGCL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + VL FGE HP L + P+ FE+YLD++P + K ++K +++S L PV Sbjct: 657 KLGPKNVLAVFGEIHPRTLQMLDIEGPLIAFEIYLDALPEPKGKGGRSKGALNVSGLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF++ + + A L+ + D+ LI DVT+FD+++G+ + EG+KSVAI V +QP + Sbjct: 717 QRDFAFLLGKDVSAEALLKAARGADKTLISDVTLFDIYEGQGVPEGQKSVAIDVTMQPRQ 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +I+ NV K T LR Sbjct: 777 KTLTDEEIDAVAKKIIANVEKATGGTLRG 805 >gi|148251830|ref|YP_001236415.1| phenylalanyl-tRNA synthetase subunit beta [Bradyrhizobium sp. BTAi1] gi|146404003|gb|ABQ32509.1| phenylalanyl-tRNA synthetase beta subunit [Bradyrhizobium sp. BTAi1] Length = 802 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/808 (48%), Positives = 527/808 (65%), Gaps = 10/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+E + + LT IGLEVE ++++ + L+P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDESVETLANKLTMIGLEVEHLEDKAKLLAPYKIARVVSAEQHPNAD 60 Query: 60 -CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +DTG +QVVCGAPN R GL+ V++PPG+ IP N+ ++V IRG+ES GM Sbjct: 61 RLRVCMVDTGDGGAPVQVVCGAPNARAGLISVFSPPGTYIPGKNITLSVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +SDD IMELP DAP+G +++ L DP +++LTPNR DC GV GIA D Sbjct: 121 LCSAAELQISDDHDGIMELPADAPIGKPYAEWAGLGDPQFEINLTPNRQDCTGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GKL + I P+ E P +K ++D LC GFA+ V+GV+N +P W++QR Sbjct: 181 LAAADMGKLNDPAIK-PIKGE-FPCPVKVAVEDERLCPGFALRLVRGVKNGPSPAWLQQR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L ++GLR I+ALVDITNY++ DR P HVFDA ++ L VRRA GE +LALD + Y L Sbjct: 239 LTSIGLRPINALVDITNYMTFDRARPLHVFDAKKVKGNLVVRRARDGETLLALDGRTYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GCD+ TTDVL+E ALW+ INIA++G+ LGI +D+R Sbjct: 299 DSSMCVIADDAGVESLAGIMGGEASGCDETTTDVLIESALWNEINIAQTGRKLGINSDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L+L LCGGT S+ + N R I F +EVKRL+GI Sbjct: 359 YRFERGVDPAFMVPGLELATKLVLELCGGTPSENVVLGNRFGDDRIIDFPLTEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +V + + RIL LGF V G +V+VPSWR DV KAD+VEEI+R+ GVD++ P Sbjct: 419 EVSLTEMRRILTHLGFVVAGAGPVVKVAVPSWRSDVHGKADIVEEIVRMVGVDKVPMTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q RTR KR LA+R M+E V WSFISK + LFGGG+ EL + NPI Sbjct: 479 ERGDAPRKPVLTPLQLRTRRAKRALAARGMVEAVTWSFISKPAAELFGGGKAELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +AD+S+MR SLLPGL+ N DR D AIFEV V++ D PE Q A+GIR+G + Sbjct: 539 AADLSDMRPSLLPGLIATVQANADRGFGDAAIFEVGQVFKGDRPEDQFVAASGIRRGIAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 G GR W+ S+ + DA A + P SL+ +G P+W HPGRSG I+ Sbjct: 599 SNGLGRHWTG-SQAANAYDAKADALAVLAAAGAPMA---SLQIVAGGPAWMHPGRSGTIQ 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + VLG+FGE HP L+ P+ FEV LD IP ++ K T+ K V+ LS+ PV Sbjct: 655 MGPQNVLGHFGELHPRALEALKADGPLVAFEVILDRIPAAKAKPTRAKPVLELSAFQPVS 714 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AFIVD+ + AG +V + VD +LI DVTVFDV++GK + +GKKS+AI V +QP Sbjct: 715 RDFAFIVDRKVKAGDIVRAAQGVDKKLITDVTVFDVYEGKGIEDGKKSIAIAVTLQPRDK 774 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +I +V KKT LR Sbjct: 775 TMTDEEIDAVAAKITADVGKKTGGTLRG 802 >gi|92115705|ref|YP_575434.1| phenylalanyl-tRNA synthetase subunit beta [Nitrobacter hamburgensis X14] gi|91798599|gb|ABE60974.1| phenylalanyl-tRNA synthetase beta subunit [Nitrobacter hamburgensis X14] Length = 817 Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/819 (46%), Positives = 526/819 (64%), Gaps = 17/819 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDTD L+K+ D LT IGLEVE +D++ +AL+PFTI +V+S ++P+ D Sbjct: 1 MKFTLSWLKEHLDTDEPLDKLADKLTMIGLEVEHIDDKAKALAPFTIARVISAAQHPNAD 60 Query: 60 -CAILRIDTGKHQE------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + +DTG+ + IQVVCGAPN R GL+ V+APPG+ IP ++ + V IRG+ Sbjct: 61 RLRVCMVDTGETDDKGGPAPIQVVCGAPNAREGLVSVFAPPGTHIPGKDITLGVGTIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS EL +SD+ I+ELP DAPVG +++ L DP+I+++LTPNR DC GV Sbjct: 121 ESRGMLCSAAELEISDNHDGILELPDDAPVGAGYAEWAGLGDPVIEINLTPNRQDCTGVH 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA DL AA +G+ K+ I P+ E P +K ++D++LC GFA+ V+GV N +P Sbjct: 181 GIARDLSAADMGRFKDPTIK-PVKGE-FPCPVKVTVEDAALCPGFALRLVRGVTNGPSPE 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W+++RL ++GLR I+ALVDITN+++ DR P HVFDA+++ LTVRRA GE +LALD Sbjct: 239 WLQKRLTSIGLRPINALVDITNFMTYDRARPLHVFDANKVQGNLTVRRARDGETLLALDG 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + Y L P VIA D ++S+AGI+GG+ +GCD+ TTDVL+E ALW INIA++G+ LGI Sbjct: 299 RTYTLDPSICVIADDKGVESLAGIMGGEQSGCDETTTDVLIESALWSEINIAQTGRKLGI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD M+P L+ L++ LCGGT SD +A R I F +E + Sbjct: 359 NSDARYRFERGVDPAFMVPGLEMATRLVMELCGGTPSDTVVAGQALPDDRVIDFPLTETR 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL+ IDVP+ + RIL LGF V G +V++P+WR DV KAD+VEEI+RI GVD++ Sbjct: 419 RLAAIDVPLVEMRRILSHLGFMVAGNGPVVKVAIPTWRTDVTGKADIVEEIVRIVGVDKV 478 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P K L+ QSRTR +R LA R M+E V WSFI+K Q+ LFGGG +EL Sbjct: 479 PMTPFDRGDAPRKPVLTPIQSRTRRGRRALAVRGMVEAVTWSFIAKPQAELFGGGAKELA 538 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI++D+S+MR SLLPGL+ N DR D A+FEV ++ D P+ Q AAGIR Sbjct: 539 LANPIASDLSDMRPSLLPGLVAIAQANADRGFPDVALFEVGQIFRGDGPQDQFMAAAGIR 598 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGA-----PS 646 +G + G GR WS + + FD K + + +L+ +G+ P+ Sbjct: 599 RGVASSAGIGRHWSGSATADGLDANTFDVKADALAVLAAAGAPVQALQIAAGSESKNFPA 658 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 W HPGRS I+ + VLGYFGE HP +L+ + FEV LD IP ++K T+ K Sbjct: 659 WLHPGRSAAIQIGPQNVLGYFGELHPRVLEALRADGSLLAFEVILDRIPEGKQKPTRAKP 718 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 V+ L + PV RD AFIVD+ + A +V + VDR L+ VTVFD+++GK + KKSV Sbjct: 719 VLELPAFQPVSRDFAFIVDRCVKAADIVRAAQGVDRKLVSGVTVFDIYEGKGIEANKKSV 778 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 AI V +QP T D +I + ++V V K+T LR Sbjct: 779 AIAVTLQPRDKTLTDQEIEAVAAKVVAEVAKRTGGSLRG 817 >gi|307943073|ref|ZP_07658418.1| phenylalanyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] gi|307773869|gb|EFO33085.1| phenylalanyl-tRNA synthetase, beta subunit [Roseibium sp. TrichSKD4] Length = 805 Score = 729 bits (1881), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/809 (47%), Positives = 522/809 (64%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ SL++I + LT IGLEVE+V NR L PFTI KV+ E++P+ D Sbjct: 1 MKFTLSWLKDHLETEASLDEIVEKLTMIGLEVEEVTNRAGRLKPFTIAKVVDAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G + +Q+VCGAPN R GL+GV PG +P + + V KIR +ES GMM Sbjct: 61 RLKVLKVDNGSGELLQIVCGAPNARKGLVGVLGRPGDYVPGLDFTLAVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LS++ I++LP DAPVG + + L DPII++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSEEHDGIIDLPEDAPVGVSYAQWAGLDDPIIEIGLTPNRPDCTGVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS-SLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAG+GKLKE + + P + + D+ +LCK F + VKGV+N +P WM+ R Sbjct: 181 AAAGIGKLKERPLKQVRGTFPCPTNVNLEFGDTPALCKAFGLRLVKGVKNGPSPKWMQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ LVDITNY++ D+G P HVFDA ++ L VRR GE I L+ + Y + Sbjct: 241 LVAIGLRPINTLVDITNYMTFDQGRPLHVFDADKVHGDLVVRRGKDGETIDGLNGKSYTV 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+ GI+GG+ +GC + TT+VL+E ALWD IA +G+ LG+ TD+R Sbjct: 301 DDSVCVIADDNAVESLGGILGGEISGCTEETTNVLIESALWDENGIAATGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ ++L LCGG SD+ A + R I F +EVKRLSGI Sbjct: 361 YRFERGVDPDYMLPGLEAATQMVLDLCGGEPSDVVQAGEVPETNRIIDFPYAEVKRLSGI 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D + + L+ LGF + G D +V+ PSWR D+E KADLVEEI+RI G+D++ S PL Sbjct: 421 DTVVPEMNLTLKSLGFWISGTGDVVKVAPPSWRPDIEGKADLVEEIVRILGLDRVPSTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + R L+ Q R +R LASR M E V WSFIS +Q+V F GG L + NPI Sbjct: 481 PRSDTVTTRVLTTGQIRRSKARRSLASRGMNEAVTWSFISHDQAVTFDGGADALVLANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S+DMS+MR SLLPGLL A RN DR D A+FEV ++ D P+ QK +AAGIR+G++ Sbjct: 541 SSDMSDMRPSLLPGLLTAGQRNADRGFPDAALFEVGQIFTGDQPDDQKMVAAGIRRGTAS 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 GSGR WS S+ VD+FDAKADA + + ++ L+ AP ++HPGRSG + Sbjct: 601 HAGSGRHWSGTSDA----VDVFDAKADAEAALSAIGAPVEKLQVYRDAPDYFHPGRSGTL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + L FGE HP IL L P+ FEVYLD++P + K T++K + S L PV Sbjct: 657 KLGPKNTLAVFGEIHPRILKDLDLDGPVVAFEVYLDALPQPKNKATRSKGKLQASDLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF+VD + A L+ + D+ LI DVT+FD+++GK + E +KS+AI VL+QP+K Sbjct: 717 RRDFAFVVDDGVEAEKLLKAARGADKTLISDVTLFDIYKGKGVDENQKSLAIDVLLQPVK 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+DI + +IV +V K T LR Sbjct: 777 KTLTDEDIEAVSKKIVASVEKATGGTLRG 805 >gi|115522521|ref|YP_779432.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris BisA53] gi|115516468|gb|ABJ04452.1| phenylalanyl-tRNA synthetase beta subunit [Rhodopseudomonas palustris BisA53] Length = 803 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/810 (47%), Positives = 532/810 (65%), Gaps = 13/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD L+K+ D LT IGLEVE ++++ + L PF+I +++S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDEPLDKLADKLTMIGLEVEGIEDKAKLLKPFSIAQIISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + +QVVCGAPN R GL V+A PG+ IP + ++V IRG+ES GMM Sbjct: 61 RLRVCKVDTGAGEPLQVVCGAPNARAGLKTVFAAPGTYIPAKDFTISVGSIRGVESQGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L D I+ELP DAPVG +D+ L DP++D++LTPNR DC GV GIA DL Sbjct: 121 CSAGELALPDGIDGIIELPADAPVGASYADWANLGDPVLDINLTPNRQDCTGVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AA +GK K+ + P+ E + ++D+ LC GFA+ VKGV+N +P W+++RL Sbjct: 181 AAADMGKFKDPAVK-PIKGE-FACPVNVIVEDAKLCPGFALRLVKGVKNGPSPEWLQKRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITN+++ DR P HVFDA+++ LTVRRA +GE +LALD + Y L Sbjct: 239 TAIGLRPINALVDITNFMTFDRARPLHVFDAAKVKGNLTVRRAKNGETLLALDGRSYTLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + ++S+AGI+GG+ +GC + TTDVL+E ALW+ INIA++G+ LGI +D+RY Sbjct: 299 DRVCVIADEHGVESLAGIMGGEASGCSEATTDVLIESALWNEINIAQTGRKLGINSDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M+P L L+L CGGT S+ + + + + I F +E+KRL+GID Sbjct: 359 RFERGVDPAFMVPGLDLATKLVLEFCGGTPSEAIVVGDRFGEEKVIDFPLAEIKRLAGID 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP+ + RIL LGF V G +++VPSWR D++ KAD+VEEI+RI GVDQ+ P P Sbjct: 419 VPLGEVRRILGHLGFMVAGTGATVKIAVPSWRSDIDGKADIVEEIVRIIGVDQVPMTPFP 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + K L+L Q+RTR KR LA+R M+E V WSFI+K + +FGGGQ EL + NPI+ Sbjct: 479 RGEAPRKPVLTLMQNRTRRAKRALAARGMVEAVTWSFIAKPSAEIFGGGQPELALANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 +D+S+MR SLLPGL+ A N DR D A+FEV +++ D P+ Q A+G+R G + Sbjct: 539 SDLSDMRPSLLPGLIAAAQANADRGTPDVALFEVGQIFKGDRPQDQMVAASGVRHGFAST 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA--PSWYHPGRSGI 655 G GR WS ++ DAKADA +V+ + +L+ +G P+W HPGRSG Sbjct: 599 LGLGRHWSGSAQATA-----LDAKADAFAVLAAAGCPISALQIATGKALPAWLHPGRSGA 653 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I+ + VLGYFGE HP L+ P+ FEV LD+IP + K ++ K + LS+ P Sbjct: 654 IQIGPQNVLGYFGELHPRALESLHADGPLFAFEVILDNIPEGKAKASRAKPTLELSAFQP 713 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD AFIVD+ + A +V +NVD +LI V VFDV++GK + E KKS+AI V IQP Sbjct: 714 VSRDFAFIVDRGVAAIDIVRAAQNVDKKLITAVGVFDVYEGKGIDETKKSIAIAVTIQPR 773 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + +IV V KKT LR Sbjct: 774 EKTLTDQEIDAIGGKIVAEVTKKTGGSLRG 803 >gi|316931431|ref|YP_004106413.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris DX-1] gi|315599145|gb|ADU41680.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris DX-1] Length = 803 Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/810 (47%), Positives = 525/810 (64%), Gaps = 13/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHLDTD LEK+ D LT IGLEVE ++++ +AL+PFTI KVL+ E++P+ D Sbjct: 1 MKLTLSWLKDHLDTDEPLEKLADKLTMIGLEVEGIEDKAKALAPFTIAKVLTAEKHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R GL+ V++PPG+ IP N+ + V IRG+ES GM Sbjct: 61 KLQVCTVDVGDGAAPVQVVCGAPNARAGLVTVFSPPGTYIPGKNITLGVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D I+ELP DAPVG +++ L DP++D++LTPNR DC GV GIA D Sbjct: 121 LCSAAELEISEDHDGIIELPADAPVGTAYAEWAGLGDPVLDINLTPNRQDCAGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GK K+ I + E P + ++DS LC GFA+ VKGV+N +P+W+++R Sbjct: 181 LAAADMGKFKDPGIKQ-IPGE-FPCPVNVTVEDSKLCPGFALRLVKGVKNGPSPDWLQKR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITNY++ DR P HVFDA+++ L VRRA GE +LALD + Y L Sbjct: 239 LAAIGLRPINALVDITNYLTFDRSRPLHVFDAAKVKGNLVVRRAKDGETLLALDGRTYSL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GC +TTDVL+E ALW+ INIA+SG+ LGI TD+R Sbjct: 299 DSSVCVIADDHGVESLAGIMGGELSGCSADTTDVLIESALWNEINIAQSGRKLGINTDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L++ CGGT S++ + N + I F +EVKRL+GI Sbjct: 359 YRFERGVDPAFMLPGLELATKLVMEFCGGTPSEVVVVGNPFADDKIIDFPLAEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +VP+ + RIL RLGF V G+ +V+VPSWR DV KADLVEE++RI GV+++ P Sbjct: 419 EVPLVEVRRILTRLGFVVAGQGPVVKVAVPSWRSDVHGKADLVEEVVRIVGVEKVPLTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q+RTR KR LA+R + E V WSFISK + FGGGQ EL + NPI Sbjct: 479 ERGDAPRKPVLTQIQNRTRRAKRALAARGLTEAVTWSFISKPFAEAFGGGQPELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+ A N DR D A+FEV V++ D P+ Q A+G+R+G + Sbjct: 539 ASDLSDMRPSLLPGLIAAAQANADRGSPDLALFEVGQVFKGDRPQDQFMAASGVRRGVAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGI 655 G GR WS ++ DAK + + L+ +G P+W HPGRSG Sbjct: 599 SAGIGRHWSGSAQATA-----LDAKADAFAVLAAAGAPMAGLQIATGKLPAWLHPGRSGA 653 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I+ + VLGYFGE HP +L+ G P+ FEV L+ IP +++ T+ K + LS+ HP Sbjct: 654 IQIGPQNVLGYFGELHPRVLEQLGADGPLVAFEVMLEKIPDPKQRPTRAKPALELSAFHP 713 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD AFIVD+ + +V + VD +LI V+VFDV++GK + KKSVAI V +QP Sbjct: 714 VSRDFAFIVDRKVGVADIVRAAQGVDKKLITSVSVFDVYEGKGIDPDKKSVAIAVTLQPR 773 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT LR Sbjct: 774 DKTMTDQEIEAVAAKIVAEVTKKTGGSLRG 803 >gi|39933115|ref|NP_945391.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris CGA009] gi|66773915|sp|Q6NDR9|SYFB_RHOPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|39652740|emb|CAE25479.1| putative phenylalanine-tRNA ligase beta chain [Rhodopseudomonas palustris CGA009] Length = 803 Score = 725 bits (1871), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/810 (47%), Positives = 520/810 (64%), Gaps = 13/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHLDTD LEK+ D LT IGLEVE ++++ + L+PFTI KVL+ ++P+ D Sbjct: 1 MKLTLSWLKDHLDTDEPLEKLADKLTMIGLEVEGIEDKAKVLAPFTIAKVLTAAKHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R GL+ V+APPG+ IP + + + IRG+ES GM Sbjct: 61 KLQVCTVDVGDGAAPVQVVCGAPNARAGLVTVFAPPGTYIPAKDFTLGIGNIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D I+ELP DAPVG + + L DP++D++LTPNR DC GV GIA D Sbjct: 121 LCSAAELQISEDHDGIIELPADAPVGAAYAAWAGLGDPVLDINLTPNRQDCAGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GK K+ I P+ E P + ++DS+LC GFA+ VKGV+N +P W+++R Sbjct: 181 LAAADMGKFKDPGIK-PIKGE-FPCPVSVTVEDSTLCPGFALRLVKGVKNGPSPEWLQKR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITNY++ DR P HVFDA+++ L VRRA GE +LALD + Y L Sbjct: 239 LTAIGLRPINALVDITNYLTFDRSRPLHVFDAAKVKGNLVVRRAKDGETLLALDGRTYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GC TTDVL+E ALW+ INIA+SG+ LGI TD+R Sbjct: 299 DSSVCVIADDHGVESLAGIMGGELSGCSAETTDVLIESALWNEINIAQSGRKLGINTDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L++ CGGT SD+ + N + I F +EVKRL+GI Sbjct: 359 YRFERGVDPAFMLPGLELATKLVMEFCGGTPSDVVVVGNPFADDKIIDFPLAEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +V + + RIL LGF+V+G+ +V+VPSWR DV KAD+VEEI+RI GVD++ P Sbjct: 419 EVSLTEIRRILNHLGFTVVGQAPVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPLTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q+RTR KR LA+R + E V WSFISK + FGGGQ EL + NPI Sbjct: 479 ERGDAPRKPVLTQIQNRTRRAKRALAARGLTEAVTWSFISKPFAEAFGGGQPELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+ A N DR D A+FEV V++ D P+ Q A+G+R+G + Sbjct: 539 ASDLSDMRPSLLPGLIAAAQANADRGSPDLALFEVGQVFKGDRPQDQFMAASGVRRGVAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGI 655 G GR WS ++ DAK + + L+ + P+W HPGRSG Sbjct: 599 SAGLGRHWSGSAQATA-----LDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGA 653 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I+ + VLGYFGE HP +L+ G P+ FEV L+ IP +++ T+ K + LS+ HP Sbjct: 654 IQIGPQNVLGYFGELHPRVLEQLGADGPLVAFEVILEKIPDPKQRPTRAKPALELSAFHP 713 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD AFIVD+ + +V + VD +LI V+VFDV++GK + KKSVAI V +QP Sbjct: 714 VSRDFAFIVDRKVAVADIVRAAQGVDKKLITSVSVFDVYEGKGIDPDKKSVAIAVTLQPR 773 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT LR Sbjct: 774 DKTMTDQEIEAVAAKIVAEVTKKTGGSLRG 803 >gi|288959439|ref|YP_003449780.1| phenylalanyl-tRNA synthetase beta chain [Azospirillum sp. B510] gi|288911747|dbj|BAI73236.1| phenylalanyl-tRNA synthetase beta chain [Azospirillum sp. B510] Length = 803 Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/819 (45%), Positives = 525/819 (64%), Gaps = 31/819 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL++I + LT++GLEVE V +R + L+PF + V+S E++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDQITEKLTALGLEVEGVHDRSKELAPFRVAHVVSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG +QVVCGAPN R G+ GV+AP G+ +P +++ + IRG+ES GMM Sbjct: 61 KLRVLMVDTGAGT-LQVVCGAPNARAGMKGVFAPEGTYVPGSDITLKKGVIRGVESNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS++EL LSD+ I+ELP DAPVG +DY L+DP+ID++LTP+R+DC GVRGIA DL Sbjct: 120 CSKRELKLSDEHEGIIELPDDAPVGAAFADYAGLNDPVIDINLTPDRADCAGVRGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKF------DLDDSSLCKGFAMCCVKGVRNNV 229 AAG+G+LK PL+ ++ P+E +F + C F ++GVRN Sbjct: 180 AAAGMGRLK------PLTEGHLDAAPVEGRFASPIGVSIAAPEACPLFVGRHIRGVRNGP 233 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ +L ++GLR ISALVDITNY++ D P HVFDA + +TVR GE + A Sbjct: 234 SPKWLQDKLVSIGLRPISALVDITNYLTFDAARPLHVFDADTVKGDITVRMGREGETLAA 293 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ ++Y L V+A D R +++AGI+GG+ GC + T +V VE AL+DP+ A++G+ Sbjct: 294 LNGKDYALDGAMTVVADDERAEALAGIVGGEPTGCTEKTVNVFVEAALFDPVRTAQTGRR 353 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 LGI +D+RYRFERGVD + ++ LIL LCGG S++ +A R + Sbjct: 354 LGIDSDARYRFERGVDPAAVFAGMERATRLILELCGGEPSELVVAGAEPNWKRSLTLRPG 413 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V L G+D+P E RIL LGF++ GE + V VPSWR DV +ADLVEE+LR++ Sbjct: 414 RVAALGGVDLPRERQERILTDLGFTIDGEDAEGRLVVGVPSWRADVHGEADLVEEVLRVH 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D I + PLP V + L+L+Q R KR LA+R + E V WSF+S + LFGGG Sbjct: 474 GFDAIPATPLPRETVLTRPALTLKQRRVALAKRTLAARGLSEAVTWSFLSGPVAELFGGG 533 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + L ++NPIS+D+ MR S+LP L++A GRN DR AD +FEV + N P+GQ + Sbjct: 534 EPGLRLVNPISSDLDVMRPSVLPNLIQAAGRNADRGYADVRLFEVGAAFRNPAPDGQDTV 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPS 646 AAGIR G++ R W+ E+ R VD+FDAKADAL+V+E +L+ + AP Sbjct: 594 AAGIRAGAA----VPRHWA----EKARNVDVFDAKADALAVLEAVGAPAANLQVTTDAPG 645 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 WYHPGRSG+++ V+ FGE HP++L+ G+ + GFEV LD++P+ +KK K Sbjct: 646 WYHPGRSGVLRLG-PTVMARFGEIHPSVLETLGVKGSVVGFEVMLDAVPLPKKKGATAKP 704 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 +V LSS PV+RD AF+VD+ + A ++ +K D+ L+ +V VFD+++G +GEG+KS+ Sbjct: 705 MVQLSSFQPVERDFAFVVDRKVEADKVLRAVKGADKALVKEVAVFDLYEGPGVGEGRKSI 764 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ V QP T DD I + +IV VVK T LR+ Sbjct: 765 AVSVTYQPTTATLTDDAIEAVGQKIVAAVVKATGGALRA 803 >gi|192288469|ref|YP_001989074.1| phenylalanyl-tRNA synthetase subunit beta [Rhodopseudomonas palustris TIE-1] gi|192282218|gb|ACE98598.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodopseudomonas palustris TIE-1] Length = 803 Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/810 (47%), Positives = 519/810 (64%), Gaps = 13/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHLDTD LEK+ D LT IGLEVE ++++ + L+PFTI KVL+ ++P+ D Sbjct: 1 MKLTLSWLKDHLDTDEPLEKLADKLTMIGLEVEGIEDKAKVLAPFTIAKVLTAAKHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R GL+ V+APPG+ IP + + + IRG+ES GM Sbjct: 61 KLQVCTVDVGDGAAPVQVVCGAPNARAGLVTVFAPPGTYIPAKDFTLGIGNIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D I+ELP DAPVG + + L DP++D++LTPNR DC GV GIA D Sbjct: 121 LCSAAELQISEDHDGIIELPADAPVGAAYAAWAGLGDPVLDINLTPNRQDCAGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GK K+ I P+ E P + ++DS+LC GFA+ VKGV+N +P W+++R Sbjct: 181 LAAADMGKFKDPGIK-PIKGE-FPCPVSVTVEDSTLCPGFALRLVKGVKNGPSPEWLQKR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITNY++ DR P HVFDA+++ L VRRA GE +LALD + Y L Sbjct: 239 LTAIGLRPINALVDITNYLTFDRSRPLHVFDAAKVKGNLVVRRAKDGETLLALDGRTYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GC TTDVL+E ALW+ INIA+SG+ LGI TD+R Sbjct: 299 DSSVCVIADDHGVESLAGIMGGELSGCSAETTDVLIESALWNEINIAQSGRKLGINTDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L++ CGGT S+ + N + I F +EVKRL+GI Sbjct: 359 YRFERGVDPAFMLPGLELATKLVMEFCGGTPSEAVVVGNPFADDKIIDFPLAEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +V + + RIL LGF+V+G+ +V+VPSWR DV KAD+VEEI+RI GVD++ P Sbjct: 419 EVSLTEIRRILNHLGFTVVGQAPVVKVAVPSWRSDVHGKADIVEEIVRIVGVDKVPLTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 K L+ Q+RTR KR LA+R + E V WSFISK + FGGGQ EL + NPI Sbjct: 479 ERGDAPRKPVLTQIQNRTRRAKRALAARGLTEAVTWSFISKPFAEAFGGGQPELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+ A N DR D ++FEV V++ D P+ Q A+G+R+G + Sbjct: 539 ASDLSDMRPSLLPGLIAAAQANADRGSPDLSLFEVGQVFKGDRPQDQFMAASGVRRGVAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGI 655 G GR WS ++ DAK + + L+ + P+W HPGRSG Sbjct: 599 SAGLGRHWSGSAQATA-----LDAKADAFAVLAAAGAPMAGLQIATNKLPAWLHPGRSGA 653 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I+ + VLGYFGE HP +L+ G P+ FEV L+ IP +++ T+ K + LS+ HP Sbjct: 654 IQIGPQNVLGYFGELHPRVLEQLGADGPLVAFEVILEKIPDPKQRPTRAKPALELSAFHP 713 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD AFIVD+ + +V + VD +LI V+VFDV++GK + KKSVAI V +QP Sbjct: 714 VSRDFAFIVDRKVAVADIVRAAQGVDKKLITSVSVFDVYEGKGIDPDKKSVAIAVTLQPR 773 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT LR Sbjct: 774 DKTMTDQEIEAVAAKIVAEVTKKTGGSLRG 803 >gi|209883592|ref|YP_002287449.1| phenylalanyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] gi|209871788|gb|ACI91584.1| phenylalanyl-tRNA synthetase, beta subunit [Oligotropha carboxidovorans OM5] Length = 807 Score = 718 bits (1853), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/813 (46%), Positives = 525/813 (64%), Gaps = 17/813 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDTD +EKI +TLT IGLEVE ++++ + L+P+TI KV++ ++P+ D Sbjct: 1 MKFTLSWLKEHLDTDEPVEKIAETLTMIGLEVEHLEDKAKTLAPYTIAKVITAVQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +DTG IQVVCGAPN R GL+ V+APPG+ IP + + V IRG+ES GM Sbjct: 61 RLRVCMVDTGNGSTPIQVVCGAPNARDGLVSVFAPPGTYIPGKGITLGVGTIRGVESHGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL +S+D I+ELP DAP+G +++ L DP+I+++LTPNR+D GV GIA D Sbjct: 121 LCSAAELEISEDHDGIIELPADAPIGKPYAEWAGLGDPVIEINLTPNRADATGVHGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA +GK K P+ ++D++LC GFA+ V+GV+N +P W+++R Sbjct: 181 LAAADMGKFKATTPK-PIKGAFA-APAAARIEDAALCPGFALRLVRGVKNGPSPEWLQRR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L ++GLR I+ALVDITN+++ DRG P HVFDA+++ L VRRA +GE + ALD + Y L Sbjct: 239 LTSIGLRPINALVDITNFMTFDRGRPLHVFDAAKVKGNLVVRRARTGETLTALDGKTYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AGI+GG+ +GC + TTDVL+E ALW+ INIA++G+ LGI +D+R Sbjct: 299 DETMCVIADDNGVESLAGIMGGEASGCGETTTDVLIESALWNEINIAQTGRKLGINSDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L+L +CGG S+I +A R I F EVKRL+GI Sbjct: 359 YRFERGVDPAFMVPGLELATKLVLDICGGEPSEIALAGKPYGDDRMIEFPIDEVKRLAGI 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DV + + R+L LGF V G+ +++VPSWR DV KAD+VEEI+RI GVD++ P Sbjct: 419 DVGLPEIKRLLTHLGFMVAGQGPVVKIAVPSWRADVAGKADIVEEIVRIVGVDRVPLTPF 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 + K L+ Q+RTR KR LA+R + E V WSF+S+ Q+ LFGGG+ EL + NPI Sbjct: 479 DRGEAPRKPVLTPLQARTRRAKRALAARGLTEAVTWSFLSRTQAELFGGGKPELALANPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SL+PGL+ A N DR D A+FEV V+ D P+ Q A G+R+ + Sbjct: 539 ASDLSDMRPSLVPGLIAAAQANADRGFGDVALFEVGQVFLGDQPDQQLTAATGVRRAMAS 598 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVI----EPFVSLD--SLRFESGAPSWYHPG 651 +G GR WS VD FDAKADAL+V+ P +L L AP W HPG Sbjct: 599 SKGFGRAWSGSWT-----VDAFDAKADALAVLAACGAPMQALQIVPLSEAKNAPQWLHPG 653 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I+ + VLGYFGE HP LD P+ FEV LD +P + + T+ K V L+ Sbjct: 654 RAATIQIGPQNVLGYFGELHPRTLDAMKADGPLVAFEVLLDRLPEPKARATRAKPPVELA 713 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 + PV RD AF+ D + A ++ +N D +LI DVT+FDV+ GK + EGKKSVAI V Sbjct: 714 AFQPVSRDFAFLADHAVKAADILRAAQNADKKLITDVTLFDVYDGKGIPEGKKSVAIAVT 773 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QP + T D DI + +IV +V K+T + LR Sbjct: 774 LQPREKTLTDQDIEAVAGKIVADVTKRTGSTLR 806 >gi|158426074|ref|YP_001527366.1| phenylalanyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] gi|158332963|dbj|BAF90448.1| phenylalanyl-tRNA synthetase beta subunit [Azorhizobium caulinodans ORS 571] Length = 803 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/809 (45%), Positives = 533/809 (65%), Gaps = 11/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFT SWL++HL+T ++ I + L+ IGLEVE V+++ +AL PF + +VL+ E++P+ D Sbjct: 1 MKFTWSWLQEHLETTQPMDAIVEKLSLIGLEVEGVEDKAKALKPFIVGEVLTAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G +QVVCGAPN R G+ V+A PG+ IP + + IRG+ES GMM Sbjct: 61 KLRLCTVNIGTGSPVQVVCGAPNARAGIKVVFASPGTVIPATGTELKIGTIRGVESRGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +E+ LSD+ I+ELP DAP+G +D L L+DP+I++++TPNR+DC+GV G+A DL Sbjct: 121 CSAREMGLSDEHDGIIELPADAPIGAPFADVLGLNDPVIEIAVTPNRADCLGVSGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS-SLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG+L I+ PL+ D D+ +L FA+ V+GV+N +P W++ + Sbjct: 181 AAAGLGELMAPRIAPVEGKFPAPLKATLDFGDTPALSPAFALRVVRGVKNGPSPEWLQDK 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+A+GLR I+ALVD+TN+++ DR P HVFD +++ L VRRA +GE +LALD + Y L Sbjct: 241 LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLKKVTGDLVVRRAKAGETLLALDGKTYTL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+AG++GG+ +GCD++TTDV++E ALWDPINIA++G+ LG+ +D+R Sbjct: 301 DESMCVIADDKGVESLAGVMGGEESGCDESTTDVVIESALWDPINIAQTGRKLGLNSDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERG+D +P L LIL +CGG S++ +A I R I F SEVKRLSG+ Sbjct: 361 FRFERGIDPAFTLPGLDLATHLILDICGGEPSEVVLAGAIPDTTRTIAFPLSEVKRLSGL 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + E+ + +LE LGF+V G + +V PSWR DVE KADLVEE++RI G++++ Sbjct: 421 EASREEIVGVLEALGFTVSGSGESVDVVPPSWRGDVEGKADLVEEVVRILGLERVTPTEF 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P LQQ TR +R LA+R ++E V WSF+S Q+ LFGGG EL ++NPI Sbjct: 481 PRENARRPVLTPLQQR-TRKARRALAARGLVEAVTWSFVSTPQAELFGGGAAELALINPI 539 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 ++D+S+MR SLLPGL+++ N DR D A+FEV V+ D P Q+ A+GIR+ ++ Sbjct: 540 ASDLSDMRPSLLPGLIRSGQANADRGFGDVALFEVGQVFAGDRPLDQRQQASGIRRATAR 599 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 G+GR W K+E V FDAKADAL+V+ + +L+ AP WYHPGRSG+ Sbjct: 600 PSGAGRHWDGKAES----VTAFDAKADALAVLAACGAPVANLQVTRDAPGWYHPGRSGVF 655 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + V+G FGE HP++L+ ++ P+ FE+ LD IP + K TK K ++ LS+ PV Sbjct: 656 RLGPN-VIGTFGELHPSVLEALDVAGPVVAFEITLDRIPEPKAKPTKVKPLLDLSAFQPV 714 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 KRD AF+VD+ + AG +V + VD +LI +V VFD+++G +GE KKSVAI+V +QP + Sbjct: 715 KRDFAFVVDRAVAAGDIVKAAQGVDKKLITEVNVFDLYEGAGVGEEKKSVAIEVTLQPRE 774 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV +V KKT A LR Sbjct: 775 RTLTDAEIEAVAGKIVADVTKKTGATLRG 803 >gi|218529887|ref|YP_002420703.1| phenylalanyl-tRNA synthetase subunit beta [Methylobacterium chloromethanicum CM4] gi|218522190|gb|ACK82775.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium chloromethanicum CM4] Length = 850 Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/855 (45%), Positives = 536/855 (62%), Gaps = 56/855 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I +TLT IGLEVE ++++ A L P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAETLTRIGLEVEGLEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPEDAPVGTPYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A GLG LK + P+ E +P+ + FD D LC FA+ V+GV N +P WM+ Sbjct: 181 AATGLGTLKREPMP-PVRGEGPCPVPVTLAFDEHDKGLCPLFALRLVRGVTNGPSPEWMQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA-------------- 281 +RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRR+ Sbjct: 240 KRLRAIGLRPINALVDITNYMTFDRGRPLHVFDARKVAGGLTVRRSKPLIRAEYSILSSQ 299 Query: 282 -----------------------------CSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 E I ALD ++Y L VVIA D ++S Sbjct: 300 EVADAEKSGLKPIYRKTFSDGAIEYSIDYLDAEIIDALDGRQYPLDDSMVVIADDDGVKS 359 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 +AGIIGG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD+RYRFERGVD +P Sbjct: 360 LAGIIGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITDARYRFERGVDPAFALPG 419 Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG 432 L L++ LCGG+ S+ IA I R I F +EV+RL+GI++ + LE LG Sbjct: 420 LDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLAGIELSRAEMKVTLESLG 479 Query: 433 FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQ-VEDKRNLSLQ 491 F + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ +PLP + V + L++ Sbjct: 480 FHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPKPLPRVETVAVEPMLTVL 539 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 Q R R KR LA R M+E V +SF++ E + LFGGG +L + NPI+AD+S+MR SL+PG Sbjct: 540 QRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALANPIAADLSDMRPSLVPG 599 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 LL+A RN DR D A+FEV + +D PEGQ A G+R+G++ GSGR WS +E Sbjct: 600 LLRAAQRNADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRGTARHAGSGRHWSGAAEA 659 Query: 612 RCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 VD F+AKADAL+++ V L+ +G P W HPGRSG ++ + V+G+FGE Sbjct: 660 ----VDAFEAKADALALLAALGVPTGGLQIVAGGPDWLHPGRSGTLQFGPKNVVGHFGEL 715 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP +L L + FE+ LDS+P+ + + TK K + L L + RD AF+V + +PA Sbjct: 716 HPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDLQAISRDFAFVVPRDVPA 775 Query: 731 GTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 ++ + +R LI + VFD+++G + +G KSVA+ V +QP + T D +I + + Sbjct: 776 ADILKAAQGAERKLITGIEVFDLYEGAGIPDGSKSVAVAVRLQPSERTLTDAEIEAVSAK 835 Query: 790 IVENVVKKTNAVLRS 804 IV V KKT A LRS Sbjct: 836 IVAEVSKKTGATLRS 850 >gi|217977998|ref|YP_002362145.1| phenylalanyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] gi|217503374|gb|ACK50783.1| phenylalanyl-tRNA synthetase, beta subunit [Methylocella silvestris BL2] Length = 810 Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/814 (45%), Positives = 513/814 (63%), Gaps = 14/814 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL +I D LT IGLEVE V D AL FTI +++ + +P+ D Sbjct: 1 MKFTLSWLKDHLETDASLTEIVDALTRIGLEVEHVEDPAAALHDFTIARIVEAKPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++TG +QVVCGAPN R GL V+APPG+ IP + ++ IRG+ES GM+ Sbjct: 61 RLQVCLVETGGGGLVQVVCGAPNARAGLKTVFAPPGAVIPAKQITLSKGVIRGVESNGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS D I+ELP +APVG + + L+DP+I+ +L PNR D +GV G+A DL Sbjct: 121 CSGAELGLSGDHDGILELPDEAPVGRAFAPWAGLADPVIEFNLLPNRPDAMGVEGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAGLG+ K +I+ +S + + + DL +DS L FA+ ++GVRN +P+W+R+ Sbjct: 181 AAAGLGRFKGRSITPVPASFPLAIAARLDLAPEDSHLAPAFALRLIRGVRNGESPDWLRK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLR I+ALVDITNY+S DR P HVFDA+++ L VRRA +GE + ALD + Y Sbjct: 241 RLTAIGLRPINALVDITNYLSFDRARPLHVFDAAKVKGDLVVRRARAGESLNALDGRVYA 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L + +VIA D QS+AGI+GG GCD TTDVL+E ALW P NIAR+G+ LGI +D+ Sbjct: 301 LDEEMIVIADDRGPQSLAGIMGGADTGCDAATTDVLIEAALWHPANIARTGRRLGINSDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFER VD ++P L+ +L L CGG AS+I +A I + +IVF EV RL+G Sbjct: 361 RYRFERSVDPAFLLPGLELATALTLEFCGGAASEIALAGKIPERDHRIVFFQGEVTRLTG 420 Query: 417 IDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +++P + ILE+LGF ++ G D+F V PS+R D+E ADLVEE++RI G+D++ Sbjct: 421 LELPPSEITGILEQLGFELVYSPGNSDRFVVKTPSFRPDIEGPADLVEEVIRIAGLDRVT 480 Query: 474 SEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 S P L+ Q R R KR LA+ ++E V WSFIS ++ FGGG EL Sbjct: 481 SRPFARESAGVQAPKLTPLQRRVRTAKRALAAAGLVEAVTWSFISHARAEAFGGGAAELT 540 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI+AD+S+MR SLLPGL+ A RN DR D A+FEV ++ D QK AA +R Sbjct: 541 LANPIAADLSHMRPSLLPGLIAAAQRNADRGHGDVALFEVGQIFLGDGEADQKIAAAALR 600 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPG 651 +G + G+GR W ++ D+FD KADAL+++ V L+ G P W HPG Sbjct: 601 QGLAKTSGAGRNWLTGAQP----ADVFDVKADALALLAALGVPTSGLQIVPGGPDWLHPG 656 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 RS ++ + +GYFGE HP L G+ P+ GFEV L+ IP+++ K TKTK + L Sbjct: 657 RSATLQFGPKTKIGYFGEIHPRALAALGVDGPLVGFEVVLNDIPVTKSKPTKTKPRLELF 716 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 L P++RD AF+VD+ + AG LV D+ L+ + VFDV++G + EGKKSVAI V Sbjct: 717 ELMPLQRDFAFVVDRSVLAGDLVKAALAADKTLVVNAEVFDVYEGPGVAEGKKSVAISVT 776 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP T + DI + ++V ++ A LR Sbjct: 777 LQPRDRTLTESDIDAVAAKVVAEAAQRAGASLRG 810 >gi|296445454|ref|ZP_06887411.1| phenylalanyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] gi|296257020|gb|EFH04090.1| phenylalanyl-tRNA synthetase, beta subunit [Methylosinus trichosporium OB3b] Length = 806 Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/810 (47%), Positives = 525/810 (64%), Gaps = 10/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK TLSWLKDHL+T +L+++ +TLT IGLEVE V + A L F I VL + +P+ D Sbjct: 1 MKLTLSWLKDHLETSATLDEVVETLTRIGLEVEHVHDPAAQLKDFVIAHVLEAKPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +QVVCGAPN R GL V++ PG+ IP + + IRG+ES GM+ Sbjct: 61 RLRVCMVDAGAGAPVQVVCGAPNARTGLRSVFSAPGTYIPGKKITLGKGVIRGVESLGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I+ELP DAPVG + + L DP+I+++LTPNR D G+ GIA DL Sbjct: 121 CSAAELELSNDHDGIIELPQDAPVGAPYAKWAGLDDPVIEINLTPNRPDAAGIFGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDD--SSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAGLG LK + I ++P + D D + L FA+ V+GV N +P W++ Sbjct: 181 AAAGLGTLKTLPIETIEGRFAMPQRVTLDFADADTHLAPLFALRLVRGVNNGQSPAWLQD 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I+ALVD+TNY++ DR P HVFDA +++ L VRRA +GE++LALD + Y Sbjct: 241 RLRAIGLRPINALVDVTNYLTFDRARPLHVFDAGKVAGDLVVRRARAGEELLALDGKTYA 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVIA D +S+AG++GG+H+GC + TTDVL+E ALWDP NIA +G+ LGI TD+ Sbjct: 301 LDADMVVIADDNGPESLAGVMGGEHSGCSEATTDVLIETALWDPTNIAHAGRKLGISTDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L+ L+L CGG ASDI +A + PR++ F E KRL+G Sbjct: 361 RYRFERGVDPAFALPGLELATKLVLEFCGGEASDIVVAGSAETPPRQLRFPFGETKRLTG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 +DV DS IL RLGF+V D V+VPSWR D+E KADLVEE+ RI G D I + P Sbjct: 421 LDVSRADSAAILTRLGFAVEAGDDDALVTVPSWRPDIEGKADLVEEVARIVGFDNIAAAP 480 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 LP + L+L Q RTR+ +R LA+R ++E V WSF+ KEQ+ FGGG L + NP Sbjct: 481 LPRCAGVTEAVLTLLQKRTRFARRALAARGLVEAVTWSFVPKEQAEAFGGGGAALALANP 540 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+A++S+MR SLLPGL+ A GRN R A+ A+FEV ++ ++ +GQK A G+R+G + Sbjct: 541 IAAELSDMRPSLLPGLIAAAGRNAARGFAEVALFEVGQIFLSEDEKGQKIAATGLRRGLA 600 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 GSGR W+ K R +FD KADAL++++ V+ L+ +GAPSWYHPGRSG Sbjct: 601 LPTGSGRHWAGKE----RTAGVFDVKADALALLQSLGVATGGLQIVAGAPSWYHPGRSGT 656 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + ++G+FGE HP +L + PI FE+ LD++P + K TK K + LS L P Sbjct: 657 LQFGPKAIIGHFGELHPRLLQQLDVEGPIAVFEIILDALPAPKAKPTKAKPKLELSDLQP 716 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF++D+ PAG LV ++N DR LI DVTVFDV++G + EG+KSV + V +QP Sbjct: 717 LSRDFAFLMDRAAPAGELVKAVQNADRTLIADVTVFDVYEGAGVPEGQKSVGVAVTLQPR 776 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I L +IV + KK A LR Sbjct: 777 DKTLTDGEIEALAHKIVTDAGKKAGARLRG 806 >gi|85714132|ref|ZP_01045121.1| phenylalanyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] gi|85699258|gb|EAQ37126.1| phenylalanyl-tRNA synthetase beta subunit [Nitrobacter sp. Nb-311A] Length = 812 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/818 (46%), Positives = 523/818 (63%), Gaps = 20/818 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDTD LEK+ D LT IGLEVE + D + +PFTI +V+S ++P+ D Sbjct: 1 MKFTLSWLKEHLDTDEPLEKLADKLTMIGLEVEHIADKSKTFAPFTIARVVSAVQHPNAD 60 Query: 60 -CAILRIDTGKHQE------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + +DTG+ + IQVVCGAPN R GL+ V+APPG+ IP N+ + V IRG+ Sbjct: 61 RLRVCMVDTGETSDKGEPAHIQVVCGAPNAREGLISVFAPPGTHIPGKNITLGVGTIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS EL +S+D I+ELP APVG +++ L DP+I+++LTPNR DC GV Sbjct: 121 ESRGMLCSAAELEISEDHDGIIELPAGAPVGVGYAEWAGLGDPVIEINLTPNRQDCTGVH 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA DL AA +G+ ++ I P+ E P ++ ++D+SLC GFA+ V+GV+N +P Sbjct: 181 GIARDLSAADMGRFRDPTIK-PVKGE-FPCPVQVTVEDASLCPGFALRMVRGVKNGPSPE 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W+++RL ++GLR I+ALVDITN+++ DRG P HVFDA ++ LT+RRA GE + ALD Sbjct: 239 WLQRRLTSIGLRPINALVDITNFMTYDRGRPLHVFDAKKVHGHLTIRRARDGETLKALDG 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + Y L P+ VIA D ++S+AGI+GG+ GCD+ TTDVL+E ALW INIA++G+ LGI Sbjct: 299 RTYTLDPNVCVIADDKGVESLAGIMGGEETGCDETTTDVLIESALWSEINIAQTGRRLGI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD M+P L+ L+ LCGGT S+ + + I F SE++ Sbjct: 359 NSDARYRFERGVDPAFMVPGLEMATRLVTELCGGTPSENVVVGQALPDDKVIDFPLSEIR 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL+ IDVP+ + RIL LGF V G +V++P+WR DV+ KAD+VEEI+RI GVD++ Sbjct: 419 RLAAIDVPLAEVRRILGHLGFMVAGNGPVVKVAIPTWRTDVQGKADIVEEIVRIVGVDKV 478 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P + K L+ QSRTR +R LA+R M+E VNWSFI+K Q+ LFGGG EL Sbjct: 479 PMTPFDRGDAQRKPVLTPIQSRTRRARRALAARGMVEAVNWSFIAKSQAELFGGGSSELA 538 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI++D+S+MR SLLPGL+ N DR D A+FEV +++ D P+ Q AAG+R Sbjct: 539 LANPIASDLSDMRPSLLPGLVAIAQANADRGFPDVALFEVGQIFKGDRPQDQFTAAAGVR 598 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA-----LSVIEPFVSLDSLRFESGAPSW 647 +G + +G+GR WS + A + I+ S DS P+W Sbjct: 599 RGIASSKGAGRHWSGSATADALDAKADALAVLAAAGAPVQAIQVAGSGDSKSL----PAW 654 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I+ + VLGYFGE HP +L+ + FEV LD +P +++K T+ K V Sbjct: 655 LHPGRSAAIQIGPQNVLGYFGELHPRVLEALKADGQVMAFEVILDRVPEAKQKATRAKPV 714 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 + L + PV RD AFIVD+ + A +V +NVDR LI VTVFD+++GK + KKSVA Sbjct: 715 LELPAFQPVSRDFAFIVDRGVNAADIVRAAQNVDRKLIAGVTVFDLYEGKGIDANKKSVA 774 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 I V +QP T D +I + ++V V K+T LR Sbjct: 775 IAVTLQPRDKTLTDQEIDAVAAKVVAEVGKRTGGSLRG 812 >gi|154250677|ref|YP_001411501.1| phenylalanyl-tRNA synthetase subunit beta [Parvibaculum lavamentivorans DS-1] gi|154154627|gb|ABS61844.1| phenylalanyl-tRNA synthetase, beta subunit [Parvibaculum lavamentivorans DS-1] Length = 812 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/815 (45%), Positives = 532/815 (65%), Gaps = 14/815 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T+ +L++I + LT +GLEVE V D + L FT+ KVL + +PD D Sbjct: 1 MKFTLSWLKQPLETEATLDEIVERLTMLGLEVEGVEDPAKKLGVFTVAKVLEAKPHPDAD 60 Query: 60 -CAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 +L+++ G+ +++QVVCGAPN R GL GV+APPG+ IP N M++ KIRG+ES Sbjct: 61 KLQVLKVEALVEGEVKQLQVVCGAPNARAGLTGVFAPPGATIPANGMVLKPTKIRGVESN 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GMMCSE+EL LSD+ I++L D VG ++ L +DP+I++++TPNR DC+GV G+A Sbjct: 121 GMMCSERELELSDEHEGIIDLKGDWKVGTPAAEVLGRNDPVIEIAITPNRPDCLGVYGVA 180 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS--LCKGFAMCCVKGVRNNVAPNW 233 DL AAGLG+L+E N P+ IK + + C FA ++GV+N +P+W Sbjct: 181 RDLAAAGLGRLREGNFPPVQGKFESPIGIKLEFPSGAENACPVFAGRLIRGVKNGPSPDW 240 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ LKAVGLR I+ALVDITN++SLDRG P HV+DAS+++ + R GEK++ALD + Sbjct: 241 LQNWLKAVGLRPINALVDITNFISLDRGRPLHVYDASKLTGDIRARLGREGEKLVALDGK 300 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 YD+ PD VIA D R+ +AG++GG+ +G T DV +E A +DP AR+G++ GII Sbjct: 301 TYDVKPDYCVIADDARVLGLAGVMGGEESGSTAETVDVFIESAYFDPYRTARTGRDTGII 360 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD Q + P L+ +IL CGG S+I +A + I F + +++ Sbjct: 361 SDARYRFERGVDPQFVRPGLELATKMILEFCGGEPSNIVVAGEEPDTSKTIDFDPARIEK 420 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L+G+ +P +++RIL LGF V+ E K VSVPSWR D++ +ADLVEE++R++G++++ Sbjct: 421 LTGLSLPQSETMRILSALGFKVLEEGSRKLSVSVPSWRPDIDGQADLVEEVVRVHGLNEV 480 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-- 530 KS LP K LS +Q R R +R LA+R ++E V WSFI + +VLFGGG Sbjct: 481 KSVALPRLHAVAKPVLSSRQRRERMARRALAARGLVEAVTWSFIPERDAVLFGGGNAAPL 540 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 L++ NPISADMS+MR SLL GL+ A GRN+ R D +FEV +E+D P GQ A+G Sbjct: 541 LKLANPISADMSHMRPSLLAGLIAAAGRNMARGFPDVGMFEVGQQFESDEPSGQVLAASG 600 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 IR+G++ +G+GR W KS +D L+ + + + + + AP+WYHP Sbjct: 601 IRRGTARPQGAGRHWQGKSGP-AEAMDAKADAVALLAALG--APVANFQIGADAPAWYHP 657 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GRSG+ + + V+GYFGE HP +LD ++ PI GFE++ D+IP ++K T+ K + L Sbjct: 658 GRSGVFRLGPKNVIGYFGELHPRVLDDMDVAGPIVGFEIFPDAIPEPKRKPTRAKPPLEL 717 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S L PV+RD AF+V + + A L+ K D +LI DV++FDVF+G SLGEG+KS+AI+V Sbjct: 718 SDLQPVRRDFAFVVSEGVTADQLLRAAKGADKKLITDVSLFDVFEGGSLGEGQKSLAIEV 777 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP++ T D++I + RIV V K T LR Sbjct: 778 TLQPVEKTLTDEEIDAVSKRIVVAVEKATGGALRG 812 >gi|298290329|ref|YP_003692268.1| phenylalanyl-tRNA synthetase subunit beta [Starkeya novella DSM 506] gi|296926840|gb|ADH87649.1| phenylalanyl-tRNA synthetase, beta subunit [Starkeya novella DSM 506] Length = 801 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/808 (43%), Positives = 515/808 (63%), Gaps = 11/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWL++HL D SL+ + TL IG EVE V+++ A L F+I V+S ++P+ D Sbjct: 1 MKFTLSWLREHLSGDYSLDDVTGTLNRIGFEVEGVEDKAAKLKGFSIAYVVSAVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DTG+ + +QVVCGAPN R G+ V++PPG+ IP ++ + + IRG+ES GM+ Sbjct: 61 KLRVCMVDTGQGEPVQVVCGAPNARTGMKSVFSPPGTYIPGKDITLGIGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I++LP DAPVG D+ L DP++++++TPNR+D +G+ GIA DL Sbjct: 121 CSAAELELSEDHDGIIDLPADAPVGATYVDWAGLGDPVVEIAVTPNRADGLGIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+G L E I + P + + + + C FA+ V+GV+N +P+W++ +L Sbjct: 181 AAAGVGTLIEKPIEA--VKGAYPCPVSVIIAEGAPCPAFALRLVRGVKNGPSPDWLQAKL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GLR I+ LVDITN+++ D+ P HVFDA+++ L VRRA GE + ALD + Y L Sbjct: 239 RAIGLRPINTLVDITNFLTFDQNRPLHVFDAAKVHGNLVVRRAKEGESLPALDGKTYALD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D ++S+AG++GG+ +GCD+ T DVLVE ALW+PINIA++G+ LG+ +D+R+ Sbjct: 299 ESMCVIADDRAVESLAGVMGGEESGCDETTVDVLVESALWEPINIAQTGRKLGLNSDARF 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERG+D +P L+ LIL LCGG AS++ +A I R I F S ++L+G+ Sbjct: 359 RFERGIDPAFTLPGLEMATKLILDLCGGEASEVVLAGAIPDTTRVIEFPLSLTEKLTGLV 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + + L +LGF V G V+ PSWR D+E KADLVEE++RI G+D++ S P P Sbjct: 419 ASDSEQVETLGKLGFKVEGTSGTARVTPPSWRGDIEGKADLVEEVVRIAGLDRVPSIPFP 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + K L+ Q RTR KR LA+R ++E V WSF++KEQ+ LFGGG EL + NPI+ Sbjct: 479 RDETARKPVLTTLQLRTRKAKRALAARGLVEAVTWSFVAKEQAELFGGGAPELALANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 +D+S+MR SLLPGL+ + N DR D A+FEV V++ D P+ Q A GIR+ ++ Sbjct: 539 SDLSDMRPSLLPGLIGSAQANADRGHGDSALFEVGQVFKGDRPQDQFIAATGIRRATARP 598 Query: 599 EGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GR WS K+ VD FD + + +L+ + AP+W+HPGRSG + Sbjct: 599 MGAGRHWSAKAGA----VDAFDAKADALAVLAAAGAPVANLQISTDAPAWFHPGRSGTFR 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 V+G+FGE HP++L+ P+ GFEV +D IP + K T+ K ++ L++ PV+ Sbjct: 655 LGPN-VIGHFGELHPSVLEALDADGPLVGFEVLIDRIPEPKAKATRVKPLLELAAFQPVE 713 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+V + + AG +V VDR LI V VFD+++G + E KKSVA+ V +QP + Sbjct: 714 RDFAFVVPRSVAAGDMVKAAAGVDRKLITAVNVFDLYEGAGIDEDKKSVALSVTLQPREK 773 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D +I + +IV V KKT A+LR Sbjct: 774 TLTDAEIEAVAGKIVAEVAKKTGAMLRG 801 >gi|182680150|ref|YP_001834296.1| phenylalanyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] gi|182636033|gb|ACB96807.1| phenylalanyl-tRNA synthetase, beta subunit [Beijerinckia indica subsp. indica ATCC 9039] Length = 806 Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/814 (45%), Positives = 510/814 (62%), Gaps = 18/814 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ +L KI +TLT IGLEVE V D + L F I VL E +P+ D Sbjct: 1 MKFTLSWLKDHLETEATLPKIVETLTDIGLEVEAVEDPAKDLHNFIIAAVLEAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +QVVCGAPN R G+ V++PPG+ IP + + IRG+ES GM+ Sbjct: 61 RLRVCRVDIGDGKPVQVVCGAPNARAGMKSVFSPPGTYIPGKKITLGKGVIRGVESDGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I++LP DAPVG + Y L DP+ID++L PNR D +GV GIA DL Sbjct: 121 CSGAELGLSEDHDGILDLPADAPVGQPYAVYAGLDDPVIDINLLPNRPDAMGVAGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AA LG LK I+ +E + DL + ++LC FA+ V+ VRN +P W+++ Sbjct: 181 AAANLGALKTPRIAPITGVFDASVEARIDLPSEKAALCPVFALRLVRNVRNGPSPEWLQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RLKA+GLR I+ALVDITN+++ DR P HVFDA +IS + VR A +GE ++ALD + Y Sbjct: 241 RLKAIGLRPINALVDITNFLAFDRARPLHVFDADKISGAIAVRLAKAGESLVALDGKTYP 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ VVIA D ++S+AGI+GG +GCD+NT +VL+E ALWDP+NIARSG+ LGI TD+ Sbjct: 301 LAETMVVIADDNGVESLAGIMGGAASGCDENTKNVLIESALWDPVNIARSGRALGINTDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERG+D +P L +L+ CGG S I + I F SEV RL+G Sbjct: 361 RYRFERGIDPAFTLPGLDLATALVQEFCGGEPSKTIIKGEVPQHDTYIQFPWSEVTRLTG 420 Query: 417 IDVPIEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +++ ILE LGF++ G + V PS+R D+E KAD+VEEI+R+ G+D++ Sbjct: 421 VELDPSTMAGILENLGFALSVSPGNSNLVLVRAPSFRPDIEGKADIVEEIIRVAGLDKVA 480 Query: 474 SEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 S+PLP L+L Q R R KR LA+ ++E V WSFI K Q+ LFGGG Sbjct: 481 SQPLPAEGAPLASPVLTLAQKRARAAKRSLAANGLVEAVTWSFIDKTQAGLFGGGGTSTT 540 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPISAD+S MR SLLPGLL A RN R AD A+FEV ++ D + QK A GIR Sbjct: 541 LANPISADLSAMRPSLLPGLLAAAKRNRARGFADIALFEVGQIFLGDGEKDQKTAATGIR 600 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPG 651 +G + + WS ++ VD F AK DA++++ VSL L+ G +HPG Sbjct: 601 QGLA----QEKHWSASAKP----VDAFLAKGDAMALLTALGVSLGGLQIVPGGADIWHPG 652 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 RS ++ + ++G FGE +P +L + P+ GFE+ LD++P+ + K TK K + LS Sbjct: 653 RSATLQFGPKNIIGTFGELNPRLLAALDMEGPVVGFEIRLDALPLPKAKPTKAKSKLDLS 712 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 P++RD AF+VD+ + A LV ++ +R L+ DV VFDV++GK + + KKSV I V+ Sbjct: 713 DFMPLRRDFAFVVDRQVKAADLVKAVQGAERALLADVDVFDVYEGKGIADDKKSVGITVV 772 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP + T + +I + +IV V KKT AVLR+ Sbjct: 773 LQPREKTLTEAEIEAIASKIVTEVGKKTGAVLRA 806 >gi|323137109|ref|ZP_08072188.1| phenylalanyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] gi|322397467|gb|EFX99989.1| phenylalanyl-tRNA synthetase, beta subunit [Methylocystis sp. ATCC 49242] Length = 803 Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/815 (45%), Positives = 521/815 (63%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK TLSWLK+HLDT +L +I +TLT IGLEVE V + A L F I +++ ++P+ D Sbjct: 1 MKLTLSWLKEHLDTSATLAEIVETLTRIGLEVEHVHDPAAQLKDFKIAQIVEATQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG +QVVCGAPN R GL V++ PG+ IP + + IRG+ES GMM Sbjct: 61 RLRVCKVDTGAGDLVQVVCGAPNARTGLKSVFSAPGTYIPGKKITLGKGVIRGVESLGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L+ +S I+ELP DAPVG + + L DP+I+++LTPNR D GV G+A DL Sbjct: 121 CSFEELELATESDGIIELPEDAPVGETYAQWAGLDDPVIEINLTPNRPDAAGVYGVARDL 180 Query: 179 VAAGLGKLKEINI-------SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 AAGLG LK+ +I CP+ + + F DD L F + V+GV+N +P Sbjct: 181 AAAGLGVLKQRDILPVEGKFPCPVG-----VTLDFAADDKHLAPFFGLRLVRGVKNGPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+++RL+ +GLR I+ALVDITN+++ DR P HVFDA ++ L VRRA GE +LALD Sbjct: 236 AWLQRRLREIGLRPINALVDITNFLTFDRARPLHVFDAKKVKGNLVVRRAKKGETLLALD 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + ++L VVI D ++SIAG++GG+ +GC+D+TTDVL+E ALWDP NIA +G+ LG Sbjct: 296 GKTHELDETMVVICDDNGVESIAGVMGGEVSGCNDDTTDVLIETALWDPQNIAHTGRKLG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 I+TD+RYRFERGVD +P ++ L+L +CGG S++ IA + + R + F SE Sbjct: 356 IVTDARYRFERGVDPAFALPGVEFATQLVLDMCGGEPSELVIAGAVPREARVVQFPWSET 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +RL+G+DV D+ ILERLGF+V + +V+ P+WR D+E KAD+VEEI+RI GVD Sbjct: 416 QRLAGVDVTQADATAILERLGFTVEKTGTEGAKVTAPTWRPDIEGKADIVEEIVRILGVD 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + S PLP + L+L Q R R +R LA++ ++E V WSFIS EQ+ FGGG Sbjct: 476 NVPSTPLPRAEGVAPAVLTLMQKRARSARRALAAQGLVEAVTWSFISSEQAEAFGGGSAG 535 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 L++ NPI++D+S+MR SLLPGL+ A RN R + D +FEV ++ + + +GQ+ AAG Sbjct: 536 LKLANPIASDLSDMRPSLLPGLVAAANRNAARGLGDQNLFEVGQIFVDASEKGQRLAAAG 595 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYH 649 IR+G S G+GR WS ++ FDAKAD +++++ V L+ G P+W+H Sbjct: 596 IRRGLS---GAGRHWSGAAQR----AGAFDAKADVIALLQTLGVVTGGLQVVPGGPAWFH 648 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGRS ++ + V+GYFGE HP L + PI FE+ LD +P + K TK K + Sbjct: 649 PGRSATLQFGPKAVIGYFGELHPRALKALDVEGPIAAFEIILDMLPAPKTKPTKIKPKLE 708 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS L P+ RD AFIVD+ PAG LV + D+ LI V+VFD+++G + EGKKSV + Sbjct: 709 LSDLQPLSRDFAFIVDRAAPAGDLVKAVAGADKALITSVSVFDIYEGVGVPEGKKSVGVA 768 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +QP + T D +I + +IV +KT A LR Sbjct: 769 VTLQPREKTLTDAEIEAVAQKIVAEAGRKTGATLR 803 >gi|154245874|ref|YP_001416832.1| phenylalanyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] gi|154159959|gb|ABS67175.1| phenylalanyl-tRNA synthetase, beta subunit [Xanthobacter autotrophicus Py2] Length = 804 Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/809 (44%), Positives = 528/809 (65%), Gaps = 10/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFT SWL+DHL+ S + I + L+ IGLEVE V+++ L+PF + +VL+ E++P+ D Sbjct: 1 MKFTFSWLQDHLEPTASFDAIVERLSLIGLEVEGVEDKARQLAPFVVGEVLTAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + GK + IQVVCGAPN R GL V+A PG+ IP + + + + KIR +ES GM+ Sbjct: 61 KLKVCTVSIGKGEPIQVVCGAPNARAGLKTVFAAPGTVIPTSGLELKIGKIRDVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS++ I+ELP DA G ++ L L+DP++++++TPNR+DC+GV G+A DL Sbjct: 121 CSARELGLSEEHDGILELPEDATPGAPFAEVLGLNDPVVEIAVTPNRADCLGVAGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS-SLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG+L + + PL + + ++ SLC FA+ VKGV+N +P WM+ R Sbjct: 181 AAAGLGELMAPKVKPVDGTFPAPLGVTLEFGETGSLCPAFALRVVKGVKNGPSPQWMQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+A+GLR I+ALVD+TN+++ DR P HVFD +++ L VRR GE +LALD + Y L Sbjct: 241 LRAIGLRPINALVDVTNFMTFDRNRPLHVFDLAKVKGNLVVRRGRPGETLLALDGKTYAL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA + ++S+AGI+GG+ +GCD+ TTDV++E ALWD INIA++G+ LGI +D+R Sbjct: 301 DETMCVIADENGVESLAGIMGGEASGCDEGTTDVVIESALWDAINIAQTGRKLGINSDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERGVD +P L+ LI +CGG AS++ +A I R I F SEVKRL+G+ Sbjct: 361 FRFERGVDPAFTLPGLELATHLIQEICGGEASEVVLAGAIPDTARTIRFPLSEVKRLAGL 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + ++ +LE LGF+V G +V PSWR D+E KADLVEE++RI G+D++ + L Sbjct: 421 EASEQEIRDVLEALGFAVSGAAPVLDVVPPSWRGDIEGKADLVEEVVRILGLDRVPATEL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + K L+ Q R+R +R LA+R M+E V WSF+S+E + +FGGG L + NPI Sbjct: 481 PRGEDARKAVLTPLQLRSRKARRALAARGMVEAVTWSFVSQEAARMFGGGAPALALSNPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +A++S+MR SLLPGL+KA G N R AD A+FEV ++ +DTP GQ+ A G+R+G++ Sbjct: 541 AAELSDMRPSLLPGLIKAAGTNAARGFADAALFEVGQIFLDDTPTGQRQAATGLRRGTAK 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGII 656 G+GR WS + VD+FDAKADA + + + + +L+ + AP WYHPGRSG + Sbjct: 601 PSGAGRHWSGTAGA----VDVFDAKADATAALAACGAPVANLQVTTDAPGWYHPGRSGTL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + + +FGE HP +L+ ++ P+ FE+ LD IP + K T+ K + LS+ V Sbjct: 657 RLGSN-AMAHFGEIHPAVLEALDVAGPLVAFEIILDKIPEPKAKATRVKPNLDLSAFQAV 715 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 KRD AF+V + + A ++ + DR L+ V +FD+++GK + KKSVA++V +QP + Sbjct: 716 KRDFAFVVGREVAAADILKAAQGADRKLVTAVGLFDLYEGKGIDPDKKSVAVEVTLQPRE 775 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D DI + RIV V KKT A LR Sbjct: 776 RTLTDKDIEEVAGRIVAEVTKKTGATLRG 804 >gi|83308747|emb|CAJ01657.1| putative phenylalanyl-trna synthetase, beta chain, pheT [Methylocapsa acidiphila] Length = 810 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/815 (44%), Positives = 506/815 (62%), Gaps = 16/815 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD L +I +TLT IGLEVE+V D AL F V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETDAGLLEIVETLTKIGLEVERVEDPSAALRDFVTALVVEAKPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + IQVVCGAPN R GL V+A PG+ IP + + IRG+ES GM+ Sbjct: 61 RLQVCLVDAGGERPIQVVCGAPNARTGLKSVFALPGAYIPGKKVTLGKGVIRGVESNGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LSDD I+ELP APVG +++ L+DP+++++L PNR D +GV+G+A DL Sbjct: 121 CSGSELGLSDDHDGILELPESAPVGAPYAEWAGLADPMVEINLLPNRPDAMGVQGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAGLGK + ++ P+++K D +D+ L A V+GVRN +P WM++ Sbjct: 181 AAAGLGKFLDRTVAPVPEGARFPIDVKLDFAPEDAHLAPVVAFRLVRGVRNGPSPEWMQR 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RLKA+GLR I+ALVDITNY + DR P HVFDA+++ + +RRA GE++ ALD + Y Sbjct: 241 RLKAIGLRPINALVDITNYFAFDRARPLHVFDAAKVQGDIVIRRARPGEQLRALDGRTYA 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVIA + ++S+AGI+GG+ +GCD+ TT VL+E ALWDP+NIAR+G+ LGI +D+ Sbjct: 301 LDSDMVVIADEAGVESLAGIMGGEASGCDEATTSVLIESALWDPVNIARTGRKLGINSDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L + +L LCGG AS + + +I F SEV RL+G Sbjct: 361 RYRFERGVDPAFCLPGLDLATAFVLELCGGVASFVKCVGKVPQPDTRIAFPWSEVARLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEY---DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +++ + ILERLGF + G D+ V PS+R D+E KADLVEEI+RI G++++ Sbjct: 421 LEIEASEMAAILERLGFELAGSAGNSDRILVKAPSFRPDIEGKADLVEEIVRIAGLERVA 480 Query: 474 SEPLPLT--QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PLP V D L+ Q R KR LA+ ++E V WSF+S ++ LFGGG EL Sbjct: 481 ARPLPRASEHVADP-VLTPLQKRVGASKRALAAGGLVEAVTWSFVSNRRAELFGGGAPEL 539 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPI+ ++S+MR SLLPGL+ A RN DR D A+FEV +++ GQ+ A G+ Sbjct: 540 ALANPIAPELSDMRPSLLPGLIAAAQRNADRGHGDLALFEVGQIFKGADEAGQRMAACGV 599 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHP 650 R+GS+ G GR WS + + VD FD + + L+ G P+W+HP Sbjct: 600 RRGSAKSAGVGRHWSAATGD----VDCFDAKADAMALLAALGAPVGGLQVVLGGPAWFHP 655 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GRS I++ + +G FGE HP +L+ P+ GFE+ L+ IP + + TK K + L Sbjct: 656 GRSAILQFGPKNQIGAFGEIHPRVLEELDAQGPLVGFELVLNDIPTPKSRSTKAKPKLEL 715 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S PV RD AF+VD+ + A +V +R L+ DV VFDV++GK + EGKKSVAI V Sbjct: 716 SEFMPVLRDFAFLVDRSVQAADIVKAALAGERTLVSDVGVFDVYEGKGVPEGKKSVAISV 775 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP + T + +I + +I+ V +KT A LR Sbjct: 776 ALQPREKTLTESEIDAVAAKIIAEVGRKTGATLRG 810 >gi|300021908|ref|YP_003754519.1| phenylalanyl-tRNA synthetase subunit beta [Hyphomicrobium denitrificans ATCC 51888] gi|299523729|gb|ADJ22198.1| phenylalanyl-tRNA synthetase, beta subunit [Hyphomicrobium denitrificans ATCC 51888] Length = 810 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/820 (44%), Positives = 511/820 (62%), Gaps = 26/820 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFT SWLKDHLDT+ SL++I TL++IGLEVE + D +AL F I +++ +++P+ D Sbjct: 1 MKFTFSWLKDHLDTNASLDEIETTLSAIGLEVEAIEDPAKALGAFVIARIVEAKKHPNAD 60 Query: 60 -CAILRIDTGKHQEI-QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 +++++ K Q + +VVCGAPN R GL+ V+AP G+ IP + + + + +RG+ S GM Sbjct: 61 KLQVVQVEIAKGQPLMEVVCGAPNARAGLVSVFAPLGTYIPGSKITLEKKPVRGVVSNGM 120 Query: 118 MCSEKELMLSDDSASIMELPID--APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 MCS EL L+DDSA I++LP + + VG R D L+DP+I+V LTPNR DC GVRGIA Sbjct: 121 MCSAAELELADDSAGILDLPAEWASKVGERYIDAAGLNDPVIEVKLTPNRPDCTGVRGIA 180 Query: 176 LDLVAAGLG------KLKEIN--ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 DL AAGLG KLK I C +IP+++ F D ++ C FA ++ V N Sbjct: 181 RDLAAAGLGSLKPEPKLKAIKEAFDC-----AIPVKLDFSADTANACPVFAARTIRNVSN 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P+W++ RLKAVGLR I+ALVD+TNY+SLDRG P HV+DA ++ + R SGEK Sbjct: 236 GASPDWLQNRLKAVGLRPINALVDVTNYISLDRGRPLHVYDAHKLKGAIHARLGKSGEKF 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LALD +EY + VIA D + GI+GG+ GC TT VL+E A +DP+ A +G Sbjct: 296 LALDGKEYAVDSTMCVIADDSGPLGLGGIMGGESTGCTPETTAVLIESAWFDPVRTAATG 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ +D+RYRFERGVD + P L +IL CGG AS +A + R I F Sbjct: 356 RKTGLQSDARYRFERGVDPASVRPGLDLATDMILEFCGGEASKAKVAGKEPIENRVIAFD 415 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + V +L+G+ +P + +IL LGF + GE +V+VP+WR DV ADLVEEI+RI Sbjct: 416 FARVAKLTGVKLPEAEIAKILTALGFRIEGEPSAAKVTVPTWRPDVHGPADLVEEIVRIA 475 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G++ I + PLP + L+ +Q R R +R+LASR +E V WSFI K+Q+ FGGG Sbjct: 476 GLELIPATPLPRLDGVARPVLTEKQKRARRARRLLASRGFVEAVTWSFIPKDQAKHFGGG 535 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L++ NPIS ++S+MR LLPGLL A RN +R +D A+FE+ Y + PE Q Sbjct: 536 AEALDLANPISTELSSMRPGLLPGLLTAVTRNRNRGASDVALFELGQAYRGEKPEDQYLS 595 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPS 646 AA +R G++ I G+GR WS E V +FD KAD ++ + + + P Sbjct: 596 AAAVRAGTARISGAGRQWSGSGEP----VGVFDVKADVVAALASLGIDASKAQITRDCPP 651 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 WYHPGRSG ++ + VL YFGE HP L + P+ FE+++D++P +KK+++ K Sbjct: 652 WYHPGRSGTLRLGPKTVLAYFGEVHPATLKALDVEAPVAAFEIFIDALP-PEKKKSRAKP 710 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSL-GEGKKS 764 + S L PVKRDLAF+V + + AG ++ N D+ LI +V +FDVF+G +L EG+KS Sbjct: 711 ALAASDLLPVKRDLAFVVAKDVAAGDVIKAALNADKTLIRNVNIFDVFEGGNLAAEGRKS 770 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VAI+V +QP +T D I ++ +IV +V K T A LRS Sbjct: 771 VAIEVTLQPGNETLTDQAIETIVKKIVADVKKATGAELRS 810 >gi|144899423|emb|CAM76287.1| phenylalanyl-tRNA synthetase, beta subunit [Magnetospirillum gryphiswaldense MSR-1] Length = 799 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/810 (42%), Positives = 502/810 (61%), Gaps = 19/810 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD SL +I LT +GLEVE + D + L+ FTI +++ E +P+ D Sbjct: 1 MKFTLSWLKAHLETDASLAEIDARLTMLGLEVEDIHDPAKDLAGFTIARIVEAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG IQVVCGAPN R + + A PG IP + + +RG+ES GMM Sbjct: 61 RLRVCKVDTGSGI-IQVVCGAPNARADIKVILAQPGCFIPVSGEKLKKGNVRGVESQGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I EL +DAP+G +L D L DP+I++S+TPNR+DC+GVRG+A DL Sbjct: 120 CSWRELKLGEDHDGIAELAVDAPIGAKLIDTLHF-DPVIEISITPNRADCLGVRGVARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A+GLG+LK + ++ + + P+ + D D S C F +GV+N +P W++ Sbjct: 179 AASGLGRLKPLPVAPVKGAYASPINVALDFPEDAESACPLFVGRHFRGVKNGESPQWLKD 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEY 295 RL A+GLR ISALVDITNY + D P HVFDA+R+ D +T R A GE + AL+ +EY Sbjct: 239 RLTAIGLRPISALVDITNYFTFDLARPLHVFDAARVKGDTITARLARDGETLAALNGKEY 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 LSP VIA G +++AG++GG+H+GC + TTDV +EVA +DPI A +G+ L I++D Sbjct: 299 TLSPAMTVIADAGGPEALAGVMGGEHSGCTEATTDVFLEVAFFDPIRTATTGRKLDILSD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +R+RFERGVD ++ + ++IL +CGG AS++ IA + I V+ L Sbjct: 359 ARFRFERGVDPAFLVDAAELASAMILEICGGEASELVIAGAEPDWRQSIALRPERVEALG 418 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+ V IL LG +V D V PSWR D+ + DLVEEI+RI G D + + Sbjct: 419 GVAVDNPRQQAILTALGCTVSEHGDGLLVVPPSWRADITAEHDLVEEIIRINGYDLLPAT 478 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PLP + K L+ Q R +V+R LASR ++E V WSF+ Q+ LFGGG + + N Sbjct: 479 PLPRPSMS-KPVLTPGQRRAAWVRRQLASRGLVETVTWSFLPSAQAKLFGGGALAMHLAN 537 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PIS+D+ MR S+LP L+ ATGRN DR I D +FE+ ++ P Q+ +AAG+R G Sbjct: 538 PISSDLDCMRPSVLPNLVAATGRNADRGIKDVGLFEIGPQFDGPEPGQQRNVAAGLRAGK 597 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 + + R W+DK+ R VD+FD ++ + DS + + AP+WYHPGRSG Sbjct: 598 A----TPRHWADKA----RAVDVFDAKADLLAAIAAAGANPDSFQIGTDAPNWYHPGRSG 649 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 ++K + V YFGE HP +L+ + P+ FE++L+++P + K TK K +V LS+ Sbjct: 650 VLKLGNKPV-AYFGELHPGVLNALDVKGPVVAFELFLEALPPQKAKATKAKPLVKLSAFQ 708 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 P++RD AF++D + A ++ K D+ LI DV VFD+++G ++GEGKKS+AI V +QP Sbjct: 709 PLERDFAFVMDASVSADAVLRAAKAADKALITDVAVFDLYEGPNVGEGKKSLAISVTLQP 768 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 T D++I + +IVE VVK + VLR Sbjct: 769 FDKTLTDEEIEAVSKKIVEAVVKVSGGVLR 798 >gi|312113817|ref|YP_004011413.1| phenylalanyl-tRNA synthetase subunit beta [Rhodomicrobium vannielii ATCC 17100] gi|311218946|gb|ADP70314.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodomicrobium vannielii ATCC 17100] Length = 806 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/812 (42%), Positives = 500/812 (61%), Gaps = 16/812 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD +L++I LT IGLEVE ++N+ A L F + +V+ E +P+ D Sbjct: 1 MKFTLSWLKDHLETDATLDEIAAKLTLIGLEVEGIENKAAKLESFIVARVVEAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G + +QVVCGAPN R GLLGV+A PG+ +P ++ + IRG+ES GMM Sbjct: 61 KLRVLKVDNGT-ELLQVVCGAPNARAGLLGVFAQPGTYVPGLDVTLGKASIRGVESLGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL+LS + I+ELP A VG R DY L DP+I++++TPNR DC+GVRG+A Sbjct: 120 CSERELLLSTEHNGIIELPETAAEHVGKRFVDYAGLDDPVIEIAITPNRPDCLGVRGVAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS--LCKGFAMCCVKGVRNNVAPNWM 234 DL AAG+G LK + P+ I+ L + + C F V+G + +P W+ Sbjct: 180 DLAAAGVGTLKPAPEVFEGGAFPSPIAIELPLPEGAENACPHFVGRLVRGAKVGPSPEWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RLKA+GLR I+A VD+TNYVS DR P HV+DA ++ + R +GE +ALD + Sbjct: 240 QRRLKAIGLRPINAAVDVTNYVSYDRARPLHVYDADKLEGPIAARLGRAGESFIALDGKT 299 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y++ VIA R+ + G++GG+ +G + TT + +E A +DP A +G+ GI + Sbjct: 300 YEVDDTMCVIADAARVLGLGGVMGGEASGTTEATTSIFIESAYFDPARTAATGRKTGINS 359 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+R+RFERG+D Q L LIL CGG AS++ A + F + V++L Sbjct: 360 DARFRFERGIDPQSQFEGLALATKLILDFCGGEASEVVSAGVAPSGKPAVSFDPALVQKL 419 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 SG + L+ LGF++ G F V+ PSWR D+ ADLVEE++R+ G ++I S Sbjct: 420 SGARFSGAEIATALKHLGFTIAGTGPAFTVTPPSWRPDINGAADLVEEVVRLSGAERIPS 479 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + L+ Q R +R LA+R ++E V WSFIS+ ++ FGGG L++ Sbjct: 480 TPLPRDPGIARAVLTQSQKRVLAARRTLATRGLVEAVTWSFISEAEARHFGGGAAALKLA 539 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPIS++M++MR SLLPGLL+A N +R AD A+FE+ + PE Q A+G+R G Sbjct: 540 NPISSEMTDMRPSLLPGLLEAARANANRGFADVALFEIGQFFRGARPEDQANAASGVRTG 599 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SGAPSWYHPGR 652 ++ I G+GR W + + VD+FDAKADAL+V+E + LD R + AP+WYHPGR Sbjct: 600 TARIGGAGRHWDGAA----KAVDVFDAKADALAVLEA-LGLDPARVQVTREAPAWYHPGR 654 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG +K + VLG+FGE HP L +S P+ FE++LD++P +KK T +V +S Sbjct: 655 SGALKLGPKTVLGHFGELHPETLKVLDISGPVAVFEIFLDAVPAPRKKGTAKGALV-VSG 713 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 PV+RD AF+VD+ I A ++ + ++ LI V VFDVF+GK + +GKKS+AI+V + Sbjct: 714 FQPVQRDFAFLVDKDIEAAAVLRAAEGAEKALISRVAVFDVFEGKGVPDGKKSLAIEVTL 773 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 P T + +I + +++ V K T A LR Sbjct: 774 TPPDRTLTEAEIEAVSQKVIAQVQKATGAELR 805 >gi|163793834|ref|ZP_02187808.1| Phenylalanyl-tRNA synthetase beta chain [alpha proteobacterium BAL199] gi|159180945|gb|EDP65462.1| Phenylalanyl-tRNA synthetase beta chain [alpha proteobacterium BAL199] Length = 800 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/811 (43%), Positives = 489/811 (60%), Gaps = 18/811 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDT SL +I D LT +GLE+E V++R A PF I V+ ++P+ D Sbjct: 1 MKFTLSWLKAHLDTAASLTEITDRLTMLGLELEGVEDRAAAFKPFRIAHVIEAVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +QVVCGAPN R G+ GV+AP G+ IP + + IRG ES GM+ Sbjct: 61 RLRVCKVDAGDGI-VQVVCGAPNARTGMKGVFAPAGTHIPGTGVDLKKGVIRGEESNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL LSD+ I++LP DAPVG +D+ L DP+IDV++TPNR+DC+GVRGIA DL Sbjct: 120 LSERELGLSDEHDGIIDLPQDAPVGAGWADWAGLGDPVIDVAVTPNRADCLGVRGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAGLG LK ++ S + P++ + DL D L A +GV+N +P WM+ Sbjct: 180 AAAGLGTLKPLDTSPVPGTFQSPMKWRIDLPGDRKHLAPIVAGRYFRGVKNGPSPKWMQD 239 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+AVG+R ISALVDITNYV LD G P H +D +++S LT+R A GEK LAL+ +EY Sbjct: 240 RLRAVGMRPISALVDITNYVMLDVGRPLHAYDPAKVSGDLTIRLAKPGEKYLALNGKEYA 299 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +V+A D +AG++GG+ +G D TTD+ +EVA++DPI++A +G+ LG+++D+ Sbjct: 300 FDDSMLVLADDHGADDLAGVMGGERSGVSDETTDMFLEVAIFDPISVATTGRKLGVLSDA 359 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERG+D G + L+L +CGG AS++ +A R I S +K L G Sbjct: 360 RYRFERGLDQTGPFWGTEVATRLVLEICGGEASELVVAGTEPNWRRSIALRYSRIKGLCG 419 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 +DVP ++ RIL LGF V G + V+ P WR D+E +ADLVEE++R+ G D I Sbjct: 420 VDVPEAEAKRILSDLGFEVSGAGETMTVTPPPWRGDIEGEADLVEEVVRVNGYDAIAPVS 479 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 + L+ +Q+R R KR LA R MME V +SF+ + + LFGG E ++NP Sbjct: 480 MERDATVPHPALTPEQNRRRLAKRALAGRGMMEAVTFSFLPSKHAALFGGAGAERTLVNP 539 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 ISAD+ MR ++LP LL AT RN ++ D A+FEV Y D P+ Q ++A+G+R G + Sbjct: 540 ISADLDVMRPAILPNLLAATARNANQGYPDLALFEVGPEYAGDQPQDQAWVASGLRHGRT 599 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES-GAPSWYHPGRSG 654 G + R VD+FD KADA+ ++E +L+ + APSWYHPGRSG Sbjct: 600 GPR--------DVRKSDRPVDVFDVKADAIELLEALDAPTGNLQVSTDDAPSWYHPGRSG 651 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 ++ + VL FGE HP IL F L P FEV LD++P+ ++K ++ + ++ Sbjct: 652 CLRLGPK-VLARFGELHPRILQAFDLKGPAVAFEVLLDAVPMPKRKGSQ-RPLLERIPFQ 709 Query: 715 PVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 RD AF+VD+ PA L LID V VFD ++G L EG KS+AI+V +QP Sbjct: 710 ASVRDFAFVVDEQTPADKLARAAAGADKALIDGVRVFDEYRGAGLPEGSKSIAIEVTLQP 769 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T ++ I + +IV V K LR Sbjct: 770 RTATLTEEQIEAVSAKIVAAVEKNVGGTLRG 800 >gi|209965603|ref|YP_002298518.1| phenylalanyl-tRNA synthetase, beta subunit PheT [Rhodospirillum centenum SW] gi|209959069|gb|ACI99705.1| phenylalanyl-tRNA synthetase, beta subunit PheT [Rhodospirillum centenum SW] Length = 806 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/818 (43%), Positives = 501/818 (61%), Gaps = 26/818 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD L+ I + LT++GLEVE V D AL+ F I V+S E++PD D Sbjct: 1 MKFTLSWLKAHLDTDAPLDTILEKLTALGLEVEGVEDPGRALAAFRIAHVVSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G IQVVCGAPN R G+ V+A PG+ IP + V IRG+ES GM+ Sbjct: 61 KLKLCRVDAGTGALIQVVCGAPNARTGMKSVFALPGTVIPVTGKALEVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL+LSD I++LP DAPVG +D+ L+DP+I+++LTP+R DC GVRGIA DL Sbjct: 121 CSERELLLSDAHEGIIDLPADAPVGMGYADWRGLNDPVIEIALTPDRVDCAGVRGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG+LK + + P+ ++ ++ C+ FA ++GVRN +P W++ RL Sbjct: 181 AAAGLGRLKPLAAAAVPGRFPAPVAVRL---ETPGCRQFAARLIRGVRNGPSPRWLQDRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 AVGLR ISALVDITN+ SLD+ P HVFDA+++S L VR G++ LAL+ +EY ++ Sbjct: 238 LAVGLRPISALVDITNFFSLDQVRPLHVFDAAKLSGGLVVRPTAEGDRFLALNGKEY-VT 296 Query: 299 PDNVV------IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 P ++ + DG + S+AG++GG+ G + TTDVL+EVAL++P +A +G+ LGI Sbjct: 297 PAGLIGIYDDGLQGDGALVSLAGVMGGETTGVTEATTDVLLEVALFEPTLVAEAGRRLGI 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD ++P ++ ++IL LCGG + +A R + S V Sbjct: 357 DSDARYRFERGVDPASVLPAVEQATAMILELCGGEPGETFLAGAEPDWRRTLTLRPSRVG 416 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-----KFEVSVPSWRQDVEEKADLVEEILRIY 467 L G+DVP E+ +RILE LGF V E D + PSWR DV +ADLVEE+LR++ Sbjct: 417 HLGGVDVPEEEQVRILEALGFQVTREKDFGPAGRLVCQPPSWRLDVHGEADLVEEVLRVH 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G + I + PLP K L+ Q RT +R LA R ++E V WSF+S + LFG Sbjct: 477 GFEHIPATPLPREAGTPKPALAAGQRRTANARRALAGRGLLEAVTWSFVSPAHAGLFGQV 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L++LNPISAD++ MR S L GLL+A GRN + D +FE+ + + + +GQ + Sbjct: 537 PDGLKLLNPISADLAVMRPSALIGLLQAAGRNAAKGFPDVGLFELGAAFRDGSEKGQDLV 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AAG+R G++ R W+ F DA A + P +L R AP W Sbjct: 597 AAGVRAGAA----VPRNWAKGERPVDAFDAKADALAALEAAGAPVANLQVTR---DAPDW 649 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 YHPGRSG ++ A VL FGE HP +L+ ++ P+ GFEV+L+++P +KK K + Sbjct: 650 YHPGRSGCLRLGAA-VLARFGEIHPAVLEAMEVTGPVVGFEVFLEAVPQPKKKPGTAKPL 708 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 + L P++RD AF+VDQ + A LV K D+ LI V VFDV+QG+ + G+KSVA Sbjct: 709 LELPPFQPLERDFAFVVDQAVEADRLVRAAKGADKALITRVQVFDVYQGQGVEPGRKSVA 768 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V +QP++ T D +I + ++V V K T A LR Sbjct: 769 LSVTLQPVEKTLTDAEIEAVAGKVVAAVTKATGAALRG 806 >gi|294084796|ref|YP_003551556.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Puniceispirillum marinum IMCC1322] gi|292664371|gb|ADE39472.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Puniceispirillum marinum IMCC1322] Length = 799 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/808 (42%), Positives = 502/808 (62%), Gaps = 15/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFT WL DHLDTD SL++I D L +GLEVE V +R A L+PFTI +V+S E++P+ D Sbjct: 1 MKFTRDWLFDHLDTDRSLDEILDILPMLGLEVESVTDRAAALAPFTIAEVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++TG IQVVCGAPN R G+ GV+AP G+ +P ++ + V +IRG S GM+ Sbjct: 61 KLRVCMVNTGSGDPIQVVCGAPNARAGMKGVFAPAGAYVPGIDLTLKVGEIRGEASNGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+E+ LSD+ I++LP DAPVG + Y L DP+I++++TPNR+DC+GVRG+A DL Sbjct: 121 CSEREMQLSDEHDGIIDLPADAPVGAAFAPYAGLDDPVIEIAITPNRADCLGVRGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG G+LK+++ + S P+ D S+LC +G++N +P+WM RL Sbjct: 181 AAAGYGRLKDVDFAAHDGSYDSPVNWAIDPAASALCPRITGRGFRGLKNGPSPSWMAGRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 AVG R I+ALVDITNYV +D G P H +D ++I+ D LT+R A GE + AL+ +EY L Sbjct: 241 NAVGQRPINALVDITNYVMIDLGRPLHAYDVAKINGDTLTIRPAKDGETLTALNEKEYKL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +IA +AGI+GG+ G D TT++ +E A++DPI++A + + L I +D+R Sbjct: 301 DSSMGIIADSHGADDLAGIMGGERTGVSDETTEMFLESAIFDPISVATTARKLNINSDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERG+D+ V H+ L+LS+CGG AS + A + R+I + +V++L+G+ Sbjct: 361 YRFERGLDVTSPDWVQGHVARLVLSICGGEASHMVSAGDGANWQRQIFLSHDKVEKLTGM 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DVP+ +ILE LGF+V + + VS P WR D++ ADLVEEI RI+G D + L Sbjct: 421 DVPVARQQQILEILGFTVDAKEGGWTVSPPPWRGDIDGAADLVEEIGRIHGYDNLTMAHL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P V + +LS Q+R +R LA R +ME V +SF+S+ + FGGG L+++NPI Sbjct: 481 PREHVVAQPSLSPAQARLFRARRALAGRGLMEAVTFSFLSESHAQAFGGGADHLKLVNPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 SAD+S+MR S+LP LL A RN DR AD A+FE+ V+ D P+ Q+ +GIR G+S Sbjct: 541 SADLSDMRPSILPNLLAAAARNQDRGEADVAMFEIGPVFLGDKPDEQRTACSGIRHGAS- 599 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 + R W R +D+FDAKADA + + + ++ + A ++HPGRSG + Sbjct: 600 ---APREWHGT----MRKIDVFDAKADAEAALAALGIRAAGIQTSTEALDYFHPGRSGSL 652 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 L FGEFHP I D FGL GFE+++D +P+ K + K ++ +S PV Sbjct: 653 -IQGRTKLASFGEFHPRIADMFGLRGTAVGFEIHVDDVPMP-KSKGPAKSLLSMSVFQPV 710 Query: 717 KRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 RD AFIV+ + AG L+ +K+ L+ D+ VFDV+QG ++ GKKSVAI + + P K Sbjct: 711 SRDFAFIVNADVSAGDLLRAVKSGAGSLLADMRVFDVYQGDNIEAGKKSVAITITLSPTK 770 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLR 803 T D++I + ++ K AVLR Sbjct: 771 ATLTDEEIEKISASVIALAAKNCGAVLR 798 >gi|89052945|ref|YP_508396.1| phenylalanyl-tRNA synthetase subunit beta [Jannaschia sp. CCS1] gi|88862494|gb|ABD53371.1| phenylalanyl-tRNA synthetase beta subunit [Jannaschia sp. CCS1] Length = 800 Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust. Identities = 350/812 (43%), Positives = 485/812 (59%), Gaps = 20/812 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+ +I D LT +GLEVE V++R EAL FTI + S E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASVTEITDALTDLGLEVEGVEDRAEALKTFTIAHIQSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++T + Q++CGAPN R G+ V A PG IP ++ + V KIRG+ES GMM Sbjct: 61 RLRICQVETNDGLQ-QIICGAPNARAGINVVLAKPGDYIPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SEKEL+LSD+ I+EL DA VG + D+L DP +I++++TPNR D +G+RG Sbjct: 120 ASEKELLLSDEHNGIIELK-DAQVGQKFIDWLAKHDPAKVDPVIEIAITPNRQDALGIRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A G+G LK + + + P+ I D D F +KGV+N +P W Sbjct: 179 IARDLSARGVGTLKAHDPAEIKGTYPSPISITIDADTLDTAPHFTGRLIKGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL+A+GLR ISALVDITNY + D+ P HVFDA +++ L V +A GE+I+ALD++ Sbjct: 239 LQDRLRAIGLRPISALVDITNYFTFDQNRPLHVFDADKVAGGLRVHKAAGGEEIVALDDK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L ++VI+ D ++SIAGI+GG GC ++T +V +E A WD + IA +G+ L I Sbjct: 299 TYTLPEGHMVISDDTGVESIAGIMGGAATGCTEDTVNVFLESAWWDTVAIAYAGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD +P L ++L LCGG AS++ A R VK Sbjct: 359 SDARYRFERGVDPDYTLPGLHAATQMVLDLCGGEASEVVEAGKPLDTARSYTLRPGRVKS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+DV E+ RIL LGFS G D EV VPSWR+DV+ +ADLVEE+ R+ + Q+K Sbjct: 419 LVGMDVAREEQARILTALGFSATG-TDTLEVWVPSWRRDVQGEADLVEEVARVTSLSQLK 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 +PLP L+ Q R R +R +A+ E V +SFI K + LFGGG + + Sbjct: 478 PQPLPREPGVPAPVLTPMQKRERSARRTMAALGYNECVTYSFIDKASAELFGGGTDAVML 537 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPIS++MS+MR ++LPGLL+A RN R + D A+FEV + P Q +A+G+ Sbjct: 538 ENPISSEMSHMRPAVLPGLLQAAARNQARGMMDMALFEVGAGFHGGEPGEQHLLASGLLI 597 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 G +G D R R VD++D KADA +V+ + + GA W+HPGR Sbjct: 598 GHTGPR-------DPHGAR-RPVDVYDVKADAEAVLSAIGAPAKAQILRGAREWWHPGRH 649 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G+I + VLG FGE HP +L + P F ++ +P+ + ++ V +S L Sbjct: 650 GMICLGPKKVLGIFGEVHPKVLAAMDIKGPAMAFTIFPQEVPLP-RSTNASRGAVTMSDL 708 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 V+RD AF+V +PA LVN D+ LI DV VFD F G SLGEG KS+A+ V +Q Sbjct: 709 QAVERDFAFVVPSDVPALDLVNAAAGADKTLIADVRVFDEFIGGSLGEGNKSIALAVRMQ 768 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P T +++I + D+IV V K T VLR Sbjct: 769 PQDKTLTEEEIEAVADKIVTKVSKATGGVLRG 800 >gi|46201490|ref|ZP_00054923.2| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 798 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 349/810 (43%), Positives = 496/810 (61%), Gaps = 18/810 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTL WLK HLDT+ +L +I LT+IGLEVE +D+ + L F + +L E++PD D Sbjct: 1 MKFTLDWLKSHLDTEATLAEIEVGLTAIGLEVEGIDDPSKHLGGFVVGHILEAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D+G +QVVCGAPN R GL + A PG+ IP ++ K+RG+ES GMM Sbjct: 61 KLKLCKVDSGSGI-LQVVCGAPNARAGLKVILAQPGTYIPITGDVLKKGKVRGVESQGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I EL + VG L D + DP+I++S+TPNR DC+GVRGIA DL Sbjct: 120 CSWRELKLGEDHEGIAELDVTLTVGASLLDIMSF-DPMIEISVTPNRVDCLGVRGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A GLG LK + + S P+ ++ D +DS+ C FA +KGV+N +P W++ Sbjct: 179 AAFGLGNLKPLKVEPVPGSFKSPIGVRLDFAPEDSAACPLFAGRLIKGVKNGESPQWLKD 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLR ISALVDITN+ + D P HVFDA+++ + R A GE + L+ + Y Sbjct: 239 RLTAIGLRPISALVDITNFFAYDLCRPLHVFDAAKVKGDIRARLARDGETLAGLNGKTYA 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L VIA + +++AGI+GG+H+GC + TT+V +E A +DPI A +G+ L I++D+ Sbjct: 299 LEAGMTVIADENGPEALAGILGGEHSGCTEATTEVFLEAAYFDPIRTAATGRKLDILSDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 R+RFERGVD ++P ++ +IL LCGG AS+ IA + IV + V L G Sbjct: 359 RFRFERGVDPAFVVPSMELATRMILDLCGGEASEAVIAGTEPDWQKSIVLRPNRVAELGG 418 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ++V + IL LG +V D V+ PSWR D+ + DLVEE++RI G D I + P Sbjct: 419 VEVSTQRMETILNDLGCAVAEHADGLLVNPPSWRGDITAEHDLVEEVIRINGYDNIPATP 478 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 +P K L+ Q R +V+R LASR ++E V WSF+ + Q+V+FGGG E+ + NP Sbjct: 479 MP-RPASPKPVLTPGQRRAGWVRRQLASRGLVETVTWSFLPEAQAVMFGGGAPEMHLANP 537 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 ISAD+ MR S+LP L+ A GRN DR + D A+FE+ ++ P Q+ +AAGIR G + Sbjct: 538 ISADLDVMRPSVLPNLITAAGRNADRGMKDVALFELGPQFDGPEPSQQRQVAAGIRAGRA 597 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 GR W+D + R VD FDAKAD L+ + + DSL+ + AP WYHPGRSG Sbjct: 598 ----RGRHWADPA----RNVDAFDAKADILAAVSAAGANPDSLQVAAEAPVWYHPGRSGT 649 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K + V G+FGE HP IL + P+ FE++L+++P + K TK K ++ S+L P Sbjct: 650 LKLGNKPV-GFFGEIHPGILAKLDVKGPVVAFELFLEALPAQKAKATKAKPLLKASALQP 708 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF +D + A T+V KNVD+ LI DV VFD+++G + GKKS+AI V +QP Sbjct: 709 LDRDFAFTLDTGVAADTVVRAAKNVDKALITDVAVFDLYEGDKMAAGKKSLAITVTLQPT 768 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +IV V K T LR Sbjct: 769 DKTLTDEEIEAVGAKIVAAVAKATGGELRG 798 >gi|83949958|ref|ZP_00958691.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] gi|83837857|gb|EAP77153.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius nubinhibens ISM] Length = 799 Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust. Identities = 350/820 (42%), Positives = 485/820 (59%), Gaps = 37/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T S+E+I + LT +GLEVE++ N + LS FTI KV E++PD D Sbjct: 1 MKFTLSWLKEHLETTASVEEIAEALTDLGLEVEEIVNPADRLSEFTIGKVKEAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++T + Q++CGAPN R G+ V A PG +P + + V KIRG+ES GMM Sbjct: 61 RLNICQVETDEGM-TQIICGAPNARAGITVVVAKPGVYVPGIDTTIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 CSE+E+ LS++ I+ELP VG R D+L DP +ID+++TPNR D GVRG Sbjct: 120 CSEREMELSEEHDGIIELP-SGEVGERFIDWLAAHDPAKVDPVIDIAITPNRPDACGVRG 178 Query: 174 IALDLVAAGLGKLK---EINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNV 229 +ALDL A GLGK+K E +I S P+++ D D + C+ FA ++GV+N Sbjct: 179 VALDLAARGLGKMKPAPEASIEGAFES---PIKVIIDEDARTKGCEVFAGRLIRGVKNGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ RLKA+GLR ISALVDITN+ + DR P HVFDA ++S L V RA GE ++ Sbjct: 236 SPEWLQARLKAIGLRPISALVDITNFFTFDRNRPLHVFDADKVSGDLRVHRAQGGETLVG 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +EY S VVI+ D ++SI GI+GG GC + TT+V +E A+WD + IA +G+ Sbjct: 296 LDEKEYTFSAGQVVISDDKGVESIGGIMGGLATGCTEETTNVFLEAAVWDHVQIAETGRA 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYR ERG+D +P ++ +IL LCGG S++ +A + R Sbjct: 356 LKINSDARYRNERGIDPAFNMPAIELATQMILDLCGGEPSELVVAGEVPDVARAYKLDPE 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V+ L G+ +P + + L LGF + G VPSWR DV+ +ADLVEE+ R+ + Sbjct: 416 RVQSLVGMAIPESEQRQTLTALGFRMEGSM----AHVPSWRPDVQGEADLVEEVARVASL 471 Query: 470 DQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++K PLP Q K+ LS Q R + +R A+ E V +SFI + + LFGGG Sbjct: 472 TKLKGIPLPRIQSGVPKQILSPLQKREQIARRTAAALGYNECVTYSFIDRASAELFGGGD 531 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + NPISADMS++R +LLPGLL+A RN R D A+FEV H + P Q M Sbjct: 532 DATMLANPISADMSHLRPALLPGLLQAAARNQARGQMDMALFEVGHAFHGGEPGDQHLMV 591 Query: 589 AGI---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +GI R G + G+ R VDLFDAKADA +V+ + ++ G Sbjct: 592 SGILVGRTGPKDVHGA-----------SRPVDLFDAKADAEAVLSAIGAPAKVQILRGGE 640 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 SW+HPGR G I + LG FGE HP +L + P+ GF ++ IP+ + + T+ Sbjct: 641 SWWHPGRHGRICLGPKKALGVFGELHPKVLQALDVKGPVVGFTLWPAEIPLP-RNASATR 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKS 764 + +S L V+RD AF+VD + A TLVN D+ LI+DV VFD F G SLGEGKKS Sbjct: 700 GALTVSDLQAVERDFAFVVDAEVEALTLVNAAAGADKVLIEDVRVFDEFIGGSLGEGKKS 759 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +AI V +QP T ++ DI + +IVE V K T LR Sbjct: 760 LAITVRLQPTDATLKEADIEAVSAKIVEKVTKATGGSLRG 799 >gi|83313479|ref|YP_423743.1| phenylalanyl-tRNA synthetase subunit beta [Magnetospirillum magneticum AMB-1] gi|93140700|sp|Q2VYZ1|SYFB_MAGMM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|82948320|dbj|BAE53184.1| Phenylalanyl-tRNA synthetase beta chain [Magnetospirillum magneticum AMB-1] Length = 798 Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust. Identities = 347/811 (42%), Positives = 499/811 (61%), Gaps = 20/811 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTL WLK HLDTD +LE+I LT+IGLEVE +D+ + L F + +L E++PD D Sbjct: 1 MKFTLDWLKSHLDTDATLEQIEVGLTAIGLEVEGIDDPSKHLGGFVVGHILEAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D+G +QVVCGAPN R GL + A PG+ IP ++ K+RG+ES GMM Sbjct: 61 KLKLCKVDSGAGI-LQVVCGAPNARAGLKVILAQPGTYIPITGDVLKKGKVRGVESQGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I EL + VG L D + DP+I++S+TPNR DC+GVRGIA DL Sbjct: 120 CSWRELKLGEDHDGIAELDVTLAVGASLLDIMSF-DPMIEISVTPNRVDCLGVRGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 A GLG LK + + P+ SI + ++F +DS+ C FA ++GV+N +P W++ Sbjct: 179 AAFGLGNLKPLKVE-PVPGAFKSSIGVRLEFAPEDSNACPLFAGRLIRGVKNGDSPQWLK 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 RL A+GLR ISALVDITN+ + D P HVFDA+++ + R A GE + L+ + Y Sbjct: 238 DRLTAIGLRPISALVDITNFFAYDLCRPLHVFDAAKVKGDIRARLARDGETLAGLNGKTY 297 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L VIA + +++AGI+GG+H+GC + TT+V +E A +DPI A +G+ L I++D Sbjct: 298 TLESGMTVIADENGPEALAGILGGEHSGCTEATTEVFLEAAYFDPIRTAATGRKLDILSD 357 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +R+RFERGVD ++P ++ +IL LCGG AS+ IA + IV + V L Sbjct: 358 ARFRFERGVDPAFVVPSMELATRMILDLCGGEASEAVIAGTEPDWQKSIVLRPNRVAELG 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G++V + IL LG +V D V+ PSWR D+ + DLVEE++RI G D I + Sbjct: 418 GVEVSTQRMETILNDLGCAVAEHADGLLVNPPSWRGDITAEHDLVEEVIRINGYDNIPAT 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 P+P + K L+ Q R+ +V+R LA+R ++E V WSF+ + Q+V+FGGG E+ + N Sbjct: 478 PMPRPAMP-KPVLTPGQRRSGWVRRQLATRGLVETVTWSFLPEAQAVMFGGGAPEMHLAN 536 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PIS+D+ MR S+LP L+ A GRN DR + D +FE+ ++ P Q+ +AAGIR G Sbjct: 537 PISSDLDVMRPSVLPNLVTAAGRNADRGMKDLGLFELGPQFDGPEPGQQRLVAAGIRAGR 596 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSG 654 + GR W+D + R VD FDAKAD LS + + DSL+ + AP WYHPGRSG Sbjct: 597 A----RGRHWADPA----RAVDAFDAKADILSAVAAAGANPDSLQVVAEAPVWYHPGRSG 648 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 +K + V G+FGE HP +L + P+ GFE++L+++P + K TK K ++ S+L Sbjct: 649 TLKLGNKPV-GFFGEIHPGLLAKLDVKGPVAGFELFLEALPAQKAKATKAKPLLKASALQ 707 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 P+ RD AF +D + A +V +N D+ LI DV VFD+++G + GKKS+AI V +QP Sbjct: 708 PLDRDFAFTLDTGVAADAVVRAARNADKVLISDVAVFDLYEGDKMAAGKKSLAITVTLQP 767 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+DI + +IV V K T LR Sbjct: 768 TDKTLTDEDIEAVGAKIVAAVAKATGGELRG 798 >gi|99078594|ref|YP_611852.1| phenylalanyl-tRNA synthetase subunit beta [Ruegeria sp. TM1040] gi|99035732|gb|ABF62590.1| phenylalanyl-tRNA synthetase beta subunit [Ruegeria sp. TM1040] Length = 798 Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust. Identities = 342/816 (41%), Positives = 480/816 (58%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDTD S+E+I +TLT +GLEVE+V N + L FT+ KV+ E++PD D Sbjct: 1 MKFTLSWLKEHLDTDASVEEITETLTDLGLEVEEVVNPADKLGAFTLAKVVGAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ T E Q+VCGAPN R G+ V PG +P + ++V KIRG+ES GMM Sbjct: 61 RLRVCRVMT-DEGEKQIVCGAPNAREGITVVLCKPGDYVPGLDFTLSVGKIRGVESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 S KEL L +D I+ELP VG +L D+L +DP +I++++TPNR D +GV G Sbjct: 120 ASWKELTLGEDHDGIVELP-SGEVGDKLVDWLAANDPAKVDPMIEIAITPNRPDALGVYG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + P+++ D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKASDYKPVEGQFESPIKVTIDEDTLDGCPLFTGRVIRGVKNGPSPKW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR ISALVDITN+ + D+ P HVFDA+++S L V RA GE++LALD + Sbjct: 239 LQDRLTAIGLRPISALVDITNFFTFDQNRPLHVFDAAKVSGNLRVHRATGGEELLALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y + +VI+ D +SIAGI+GG+ GC D T DV +E A WD + IA +G+ L I Sbjct: 299 TYKMQAGQMVISDDNGPESIAGIMGGEETGCTDETVDVFLESAFWDHVQIATTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + L+ +IL LCGG ASD+ A ++ R V+ Sbjct: 359 SDARYRFERGVDPEYTFEGLERATQMILDLCGGEASDVVSAGDVPDHARSYRLNAERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P + + L RLGF + G VPSWR DV+ +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESEQRQTLTRLGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKLE 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT ++ QQ R + +R AS EVV+++FI K + LFGGG E Sbjct: 475 GKPLPRLTAGIPAPVMTPQQRRLQMARRTAASLGYNEVVSYTFIDKAAAGLFGGGTDETM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS++R LLPGLL+A RN R AD ++FEV + P ++ +G+ Sbjct: 535 LANPISSEMSHLRPDLLPGLLQAAARNQARGFADVSLFEVGPAFTGGEPGEERIQISGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R W D+FDAKADA +++ + ++ G +W+H Sbjct: 595 VNRNGPKDVHGASRNW-----------DVFDAKADAEAILAAIGAPAKVQILRGGDAWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + LG FGE HP L G+ F +Y D IP+ +K ++ + Sbjct: 644 PGRHGRICLGPKKTLGVFGELHPKTLSELGIKGTAVAFTIYPDEIPLP-RKSGASRSALA 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S L V+RD AF++D + A T+VN D+ LI+DV VFD F G LG+GKKS+AI Sbjct: 703 ISDLQAVERDFAFVLDSEVEALTVVNAAAGADKTLIEDVRVFDEFIGGPLGDGKKSLAIA 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T + DI + ++IV V K T VLR Sbjct: 763 VRLQPADKTLTEKDIEAVSEKIVAKVSKATGGVLRG 798 >gi|221638159|ref|YP_002524421.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides KD131] gi|221158940|gb|ACL99919.1| Phenylalanyl-tRNA synthetase beta chain [Rhodobacter sphaeroides KD131] Length = 805 Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust. Identities = 345/826 (41%), Positives = 490/826 (59%), Gaps = 43/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ L++I LT +G EVE V D + L F I +V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETEAPLDEIVTALTDLGHEVEGVEDPVKVLGAFRICRVIEAQPHPNAD 60 Query: 60 ----CAILRIDTGK---HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 C + G +E+QVVCGAPN R GL+GV+AP G+ +P + + IRG+ Sbjct: 61 RLRLCRVATWPNGPDAPSEEVQVVCGAPNARTGLVGVFAPVGTHVPGTGVDLKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSDD I++LP DAP+G R DY ++DP I+V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDDHDGIIDLPEDAPMGMRFIDYKGVNDPTIEVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A GLG+LK PL E +P + I+ L + C FA ++G Sbjct: 181 GLARDLAARGLGRLK------PLPVEPVPGLFPSPVSVTIEAALKEKG-CPLFAGRTIRG 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+N +P+W++ RL++VGLR ISALVDITNY ++ P HVFD ++I+ L + A G Sbjct: 234 VKNGPSPDWLQARLRSVGLRPISALVDITNYFTIGLNRPLHVFDVAKITGGLRIHAAEGG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E++LALD + Y L PD ++I+ D + +S+AGI+GG+ +GC + TTDV +E A WDPI IA Sbjct: 294 EELLALDGKTYKLRPDQMLISDDAQPESLAGIMGGELSGCTEETTDVFLESAYWDPITIA 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 +G+ L I++D+RYRFERGVD +P L+ +IL LCGG AS++ + + R Sbjct: 354 ATGRALKIVSDARYRFERGVDPAFTLPGLELATRMILDLCGGEASEVVMDGAVPDTSRAY 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 F V L G+++P + LE LGF++ GE + PSWR DV+ +ADLVEEI Sbjct: 414 RFDPKRVVSLVGMEIPEAEQRATLEALGFTLDGEL----AAPPSWRPDVQGEADLVEEIA 469 Query: 465 RIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+ + +++ +PLP Q K L+ Q R + +R LA+ E V +SFI + + L Sbjct: 470 RVASLTKLQGKPLPRAQAGVPKPILTPLQVREQAARRTLAALGYNECVTYSFIDEAAAKL 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 FGGG + + NPIS++M+++R LLPGLL+A RN R AD A+ E+ V+ P Sbjct: 530 FGGGSEAVRVENPISSEMTHLRPDLLPGLLRAAARNQARGFADMALCEIGPVFAGGEPGE 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ A G+ G+S D R R VD++DAKADA +V+ + ++ Sbjct: 590 QQLQATGLLVGASAPR-------DPFGSR-RPVDVYDAKADAEAVLAAVGAPAKMQISRK 641 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W+HPGRSG + + L FGE HP IL + P F + + ++P+ K +T Sbjct: 642 VPGWWHPGRSGAVGLGPNL-LATFGEVHPKILREMDVKGPAVAFTILVANVPLP-KVKTP 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSL 758 T+ + LS L V+RD AF+VD + A TLVN + D+ LI+ V VFD F G + Sbjct: 700 TRPALKLSDLQAVERDFAFVVDASVEALTLVNAAQGADKALIESVRVFDQFSGDKAEAQM 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G GKKS+A+ V +QP T D DI + +IVE V K A LR Sbjct: 760 GAGKKSLALTVRLQPTDRTLTDKDIEAVSAKIVEKVAKAAGATLRG 805 >gi|332560186|ref|ZP_08414508.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] gi|332277898|gb|EGJ23213.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides WS8N] Length = 805 Score = 617 bits (1591), Expect = e-174, Method: Compositional matrix adjust. Identities = 345/826 (41%), Positives = 491/826 (59%), Gaps = 43/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ L++I LT +G EVE V D + L F I +V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETEAPLDEIVTALTDLGHEVEGVEDPVKVLGAFRICRVIEAQPHPNAD 60 Query: 60 ----CAILRIDTGK---HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 C + G +E+QVVCGAPN R GL+GV+AP G+ +P + + IRG+ Sbjct: 61 RLRLCRVATWPNGPDAPSEEVQVVCGAPNARTGLVGVFAPVGTHVPGTGVDLKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSDD I++LP DAP+G R DY ++DP I+V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDDHDGIIDLPEDAPMGMRFIDYKGVNDPTIEVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A GLG+LK PL E +P + I+ L + C FA ++G Sbjct: 181 GLARDLAARGLGRLK------PLPVEPVPGLFPSPVSVTIEAALKEKG-CPLFAGRTIRG 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+N +P+W++ RL++VGLR ISALVDITNY ++ P HVFD ++I+ L + A G Sbjct: 234 VKNGPSPDWLQARLRSVGLRPISALVDITNYFTIGLNRPLHVFDVAKITGGLRIHAAEGG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E++LALD + Y L P ++I+ D + +S+AGI+GG+ +GC + TTDV +E A WDPI IA Sbjct: 294 EELLALDGKTYKLRPGQMLISDDAQPESLAGIMGGELSGCTEETTDVFLESAYWDPITIA 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 +G+ L I++D+RYRFERGVD +P L+ +IL LCGG AS++ + + R Sbjct: 354 ATGRALKIVSDARYRFERGVDPAFTLPGLELATRMILDLCGGEASEVVMDGAVPDTSRAY 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 F V L G+++P + LE LGF++ GE + PSWR DV+ +ADLVEEI Sbjct: 414 RFDPKRVVSLVGMEIPEAEQRATLEALGFTLEGEL----AAPPSWRPDVQGEADLVEEIA 469 Query: 465 RIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+ + +++ +PLP Q K L+ Q R + +R+LA+ E V +SFI + + L Sbjct: 470 RVASLTKLQGKPLPRAQAGVPKPILTPLQVREQAARRMLAALGYNECVTYSFIDEAAAKL 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 FGGG + + NPIS++M+++R LLPGLL+A RN R AD A+ E+ V+ P Sbjct: 530 FGGGSEAVRVENPISSEMTHLRPDLLPGLLRAAARNQARGFADMALCEIGPVFAGGEPGE 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ A G+ G+S D R R VD++DAKADA +V+ + ++ Sbjct: 590 QQLQATGLLVGASAPR-------DPFGSR-RPVDVYDAKADAEAVLAAVGAPAKMQISRK 641 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W+HPGRSG + + L FGE HP IL + P F + + ++P+ K +T Sbjct: 642 VPGWWHPGRSGAVGLGPNL-LATFGEVHPKILREMDVKGPAVAFTILVANVPLP-KVKTP 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSL 758 T+ + LS L V+RD AF+VD + A TLVN + D+ LI+ V VFD F G + Sbjct: 700 TRPALKLSDLQAVERDFAFVVDASVEALTLVNAAQGADKALIESVRVFDQFSGDKAEAQM 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G GKKS+A+ V +QP T D DI + +IVE V K T A LR Sbjct: 760 GAGKKSLALTVRLQPTDRTLTDKDIEAVSAKIVEKVAKATGATLRG 805 >gi|77462305|ref|YP_351809.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides 2.4.1] gi|91208135|sp|Q3J5M6|SYFB_RHOS4 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|77386723|gb|ABA77908.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacter sphaeroides 2.4.1] Length = 805 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 345/826 (41%), Positives = 490/826 (59%), Gaps = 43/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ L++I LT +G EVE V D + L F I +V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETEAPLDEIVTALTDLGHEVEGVEDPVKVLGAFRICRVIEAQPHPNAD 60 Query: 60 ----CAILRIDTGK---HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 C + G +E+QVVCGAPN R GL+GV+AP G+ +P + + IRG+ Sbjct: 61 RLRLCRVATWPNGPDAPSEEVQVVCGAPNARTGLVGVFAPVGTHVPGTGVDLKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSDD I++LP DAP+G R DY ++DP I+V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDDHDGIIDLPEDAPMGMRFIDYKGVNDPTIEVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A GLG+LK PL E +P + I+ L + C FA ++G Sbjct: 181 GLARDLAARGLGRLK------PLPVEPVPGLFPSPVSVTIEAALKEKG-CPLFAGRTIRG 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+N +P+W++ RL++VGLR ISALVDITNY ++ P HVFD ++I+ L + A G Sbjct: 234 VKNGPSPDWLQARLRSVGLRPISALVDITNYFTIGLNRPLHVFDVAKITGGLRIHAAEGG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E++LALD + Y L P ++I+ D + +S+AGI+GG+ +GC + TTDV +E A WDPI IA Sbjct: 294 EELLALDGKTYKLRPGQMLISDDAQPESLAGIMGGELSGCTEETTDVFLESAYWDPITIA 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 +G+ L I++D+RYRFERGVD +P L+ +IL LCGG AS++ + + R Sbjct: 354 ATGRALKIVSDARYRFERGVDPAFTLPGLELATRMILDLCGGEASEVVMDGAVPDTSRAY 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 F V L G+++P + LE LGF++ GE + PSWR DV+ +ADLVEEI Sbjct: 414 RFDPKRVVSLVGMEIPEAEQRTTLEALGFTLEGEL----AAPPSWRPDVQGEADLVEEIA 469 Query: 465 RIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+ + +++ +PLP Q K L+ Q R + +R LA+ E V +SFI + + L Sbjct: 470 RVASLTKLQGKPLPRAQAGVPKPILTPLQVREQAARRTLAALGYNECVTYSFIDEAAAKL 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 FGGG + + NPIS++M+++R LLPGLL+A RN R AD A+ E+ V+ P Sbjct: 530 FGGGSEAVRVENPISSEMTHLRPDLLPGLLRAAARNQARGFADMALCEIGPVFAGGEPGE 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ A G+ G+S D R R VD++DAKADA +V+ + ++ Sbjct: 590 QQLQATGLLVGASAPR-------DPFGSR-RPVDVYDAKADAEAVLAAVGAPAKMQISRK 641 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W+HPGRSG + + L FGE HP IL + P F + + ++P+ K +T Sbjct: 642 VPGWWHPGRSGAVGLGPNL-LATFGEVHPKILREMDVKGPAVAFTILVANVPLP-KVKTP 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSL 758 T+ + LS L V+RD AF+VD + A TLVN + D+ LI+ V VFD F G + Sbjct: 700 TRPALKLSDLQAVERDFAFVVDASVEALTLVNAAQGADKALIESVRVFDQFSGDKAEAQM 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G GKKS+A+ V +QP T D DI + +IVE V K T A LR Sbjct: 760 GAGKKSLALTVRLQPTDRTLTDKDIEAVSAKIVEKVAKATGATLRG 805 >gi|126461181|ref|YP_001042295.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides ATCC 17029] gi|126102845|gb|ABN75523.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacter sphaeroides ATCC 17029] Length = 805 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 345/826 (41%), Positives = 489/826 (59%), Gaps = 43/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ L++I LT +G EVE V D + L F I +V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETEAPLDEIVTALTDLGHEVEGVEDPVKVLGAFRICRVIEAQPHPNAD 60 Query: 60 ----CAILRIDTGK---HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 C + G +E+QVVCGAPN R GL+GV+AP G+ +P + + IRG+ Sbjct: 61 RLRLCRVATWPNGPDAPSEEVQVVCGAPNARTGLVGVFAPVGTHVPGTGVDLKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSDD I++LP DAP+G R DY ++DP I+V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDDHDGIIDLPEDAPMGMRFIDYKGVNDPTIEVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A GLG+LK PL E +P + I+ L + C FA ++G Sbjct: 181 GLARDLAARGLGRLK------PLPVEPVPGLFPSPVSVTIEAALKEKG-CPLFAGRTIRG 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+N +P+W++ RL+AVGLR IS LVDITNY ++ P HVFD ++I+ L + A G Sbjct: 234 VKNGPSPDWLQARLRAVGLRPISTLVDITNYFTIGLNRPLHVFDVAKITGGLRIHAAEGG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E++LALD + Y L P ++I+ D + +S+AGI+GG+ +GC + TTDV +E A WDPI IA Sbjct: 294 EELLALDGKTYKLRPGQMLISDDAQPESLAGIMGGELSGCTEETTDVFLESAYWDPITIA 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 +G+ L I++D+RYRFERGVD +P L+ +IL LCGG AS++ + + R Sbjct: 354 ATGRALKIVSDARYRFERGVDPAFTLPGLELATRMILDLCGGEASEVVMDGAVPDTSRAY 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 F V L G+++P + LE LGF++ GE + PSWR DV+ +ADLVEEI Sbjct: 414 RFDPKRVVSLVGMEIPEAEQRTTLEALGFTLEGEM----AAPPSWRPDVQGEADLVEEIA 469 Query: 465 RIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+ + +++ +PLP Q K L+ Q R + +R LA+ E V +SFI + + L Sbjct: 470 RVASLTKLQGKPLPRAQAGVPKPILTPLQVREQAARRTLAALGYNECVTYSFIDEAAAKL 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 FGGG + + NPIS++M+++R LLPGLL+A RN R AD A+ E+ V+ P Sbjct: 530 FGGGSEAVRVENPISSEMTHLRPDLLPGLLRAAARNQARGFADMALCEIGPVFAGGEPGE 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ A G+ G+S D R R VD++DAKADA +V+ + ++ Sbjct: 590 QQLQATGLLVGASAPR-------DPFGSR-RPVDVYDAKADAEAVLAAVGAPAKMQISRK 641 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W+HPGRSG + + L FGE HP IL + P F + + ++P+ K +T Sbjct: 642 VPGWWHPGRSGAVGLGPNL-LATFGEVHPKILREMDVKGPAVAFTILVANVPLP-KVKTP 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSL 758 T+ + LS L V+RD AF+VD + A TLVN + D+ LI+ V VFD F G + Sbjct: 700 TRPALKLSDLQAVERDFAFVVDASVEALTLVNAAQGADKALIESVRVFDQFSGDKAEAQM 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G GKKS+A+ V +QP T D DI + +IVE V K T A LR Sbjct: 760 GAGKKSLALTVRLQPTDRTLTDKDIEAVSAKIVEKVAKATGATLRG 805 >gi|254509503|ref|ZP_05121570.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] gi|221533214|gb|EEE36202.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium KLH11] Length = 798 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 344/817 (42%), Positives = 485/817 (59%), Gaps = 32/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+++I + LT +GLEVE++ N + L+ FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASIDEIAEALTDLGLEVEEIVNPADRLAGFTLGHVTHAEKHPDAD 60 Query: 60 CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 LR+ T E +Q++CGAPN R G+ V PG IP ++ +NV KIRG+ES GM Sbjct: 61 K--LRVCTVATDEGDLQIICGAPNAREGITVVVCKPGMYIPGLDITINVGKIRGVESFGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVR 172 M SE+EL LSD+ I+ELP VG + D+L +DP +I++++TPNR D +GV Sbjct: 119 MASERELELSDEHDGIIELP-SGEVGDQFVDWLAENDPSKVDPVIEIAITPNRPDALGVA 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA DL A GLGKLKE + + P+ + D D F ++GV+N +P Sbjct: 178 GIARDLAARGLGKLKERDYAPVPGDFDSPIRVSIDKDTLDGAPHFTGRVIRGVKNGPSPQ 237 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ +LKA+GLR ISALVDITNY++ D+ P HVFD ++ L V RA GEK++ALD Sbjct: 238 WLQDQLKAIGLRPISALVDITNYMTFDQNRPLHVFDVDKVQGNLRVHRASGGEKLVALDE 297 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L P +VI+ D +SIAGI+GG+ GC D T +V +E A WD + IA +G+ L I Sbjct: 298 KEYTLQPGMMVISDDKGPESIAGIMGGEETGCTDETVNVFLESAFWDHVQIALTGRALKI 357 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD + L+ +IL +CGG S + A R ++ V+ Sbjct: 358 NSDARYRFERGVDPEYTREGLEQATQMILDICGGEVSKVVEAGKAPNHARAYKLDSARVQ 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+D+P + + L RLGF + G+ VPSWR DV +ADLVEE+ RI + ++ Sbjct: 418 SLVGMDIPESEQRQTLTRLGFRLDGDM----AHVPSWRPDVMGEADLVEEVARIASLTKL 473 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + +PLP +T K ++ Q R +R A+ E V+++FI + + LFGGG Sbjct: 474 QGKPLPRVTDGIPKAVMTPAQRRQSMARRTCAALGYNECVSYTFIDQASAALFGGGDAAT 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 ++ NPIS++MS+MR LLPGLL+A RN R +D A+FEV V+ + P Q+ G+ Sbjct: 534 QLENPISSEMSHMRPDLLPGLLQAAARNQARGYSDAALFEVGPVFHDGEPGDQQTQITGL 593 Query: 592 RKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G SG + G+ R VD+FDAKADA +V+ + ++ GA +W+ Sbjct: 594 LVGRSGPKDVHGA-----------SRPVDVFDAKADAEAVLAAIGAPAKVQILRGAEAWW 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VLG FGE HP +L + P F ++ D +P+ +K T+ + Sbjct: 643 HPGRHGKICLGPKKVLGVFGELHPRVLQAMDIKGPAMAFTIWPDQVPMP-RKSGATRSAL 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 L L V+RD AF+VD+ + A TLVN D+ LI+DV VFD F G S+GEGKKS+AI Sbjct: 702 ELRDLQAVERDFAFVVDEAVEALTLVNAAAGADKALIEDVRVFDEFIGGSVGEGKKSLAI 761 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T ++ DI + +IVE V K T LR Sbjct: 762 TVRLQPSDATLKEKDIEAVSAKIVEKVAKATGGTLRG 798 >gi|260431622|ref|ZP_05785593.1| phenylalanyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] gi|260415450|gb|EEX08709.1| phenylalanyl-tRNA synthetase, beta subunit [Silicibacter lacuscaerulensis ITI-1157] Length = 798 Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust. Identities = 344/817 (42%), Positives = 487/817 (59%), Gaps = 32/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+++I + LT +GLEVE+V N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASVDEIAEALTDLGLEVEEVINPADKLKDFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V PG+ IP + ++V KIRG+ES GMM Sbjct: 61 KLRVCKVDT-DEGELQIICGAPNAREGITVVVCKPGTYIPGLDTTISVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP VG R D+L +DP +I++++TPNR D +GV G Sbjct: 120 ASERELELSDEHDGIIELP-SGEVGQRFVDWLAENDPAKIDPVIEIAITPNRPDALGVAG 178 Query: 174 IALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 IA DL A GLG LK+ + + P ES P+++ D D C F ++GV+N +P Sbjct: 179 IARDLAARGLGTLKQRDYVPVPGDFES-PIKVTIDDDTLDGCPHFTGRLIRGVKNGPSPQ 237 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ +LKA+GLR ISALVDITNY++ D P HVFDA ++ L V RA GEK++ALD Sbjct: 238 WLQDQLKAIGLRPISALVDITNYMTFDSNRPLHVFDADKVKGNLRVHRAKGGEKLMALDE 297 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L P +VI+ D +SIAGI+GG GC ++T +V +E A WD + IA +G+ L I Sbjct: 298 KEYTLQPGMLVISDDNGPESIAGIMGGMETGCTEDTVNVFLESAFWDHVQIALAGRALKI 357 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD + L+H +IL +CGG S + A R + V+ Sbjct: 358 NSDARYRFERGVDPAYTLEGLEHATQMILDICGGEVSKVVEAGKAPDHSRAYRLDAARVQ 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+D+P + + L RLGF + G+ VPSWR D++ +ADLVEE+ RI + ++ Sbjct: 418 SLVGMDIPESEQRQTLTRLGFRLEGDM----AHVPSWRPDIQGEADLVEEVARIASLTKL 473 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + +PLP +T K ++ Q R +R A+ E V+++FI + + LFGGG Sbjct: 474 QGKPLPRVTDGIPKPVMTPAQRRQSMARRTCAALGYNECVSYTFIDQASAALFGGGDDAT 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS+MR LLPGLL+A RN R AD A+FEV V+ P ++ AG+ Sbjct: 534 MLENPISSEMSHMRPDLLPGLLQAAARNQARGFADLALFEVGPVFFGGEPGEERTQIAGL 593 Query: 592 ---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 R G + G+ R VD+FDAKADA +V+ + ++ +W+ Sbjct: 594 LVGRTGPKDVHGT-----------ARPVDVFDAKADAEAVLAAIGAPAKVQILRDGDAWW 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VLG FGE HP +L + P F ++ D +P+ +K T T+ + Sbjct: 643 HPGRHGKICLGPKKVLGVFGELHPRVLQQLDIKGPAVAFTIWPDEVPLPRKSGT-TRSAL 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 L L V+RD AF+VD + A TLVN D+ LI++V VFD F G SLGEGKKS+AI Sbjct: 702 ELRDLQAVERDFAFVVDADVEALTLVNAAAGADKALIEEVRVFDEFIGGSLGEGKKSLAI 761 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T ++ DI + ++I+ V K T VLR Sbjct: 762 TVRLQPTDSTLKEKDIEAVAEKIIAKVTKATGGVLRG 798 >gi|86140196|ref|ZP_01058758.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] gi|85823133|gb|EAQ43346.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. MED193] Length = 798 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 344/816 (42%), Positives = 485/816 (59%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+++I +TLT +GLEVE++ N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASVDEIAETLTDLGLEVEEISNPGDRLKDFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DT E+Q++CGAPN R G+ V PG +P ++ + V KIRG+ES GMM Sbjct: 61 KLRVCTVDT-DEGEMQIICGAPNAREGITVVVCKPGMYVPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP A VG R D+L + DP+I++++TPNR D +G+ G Sbjct: 120 ASERELELSDEHDGIIELPSGA-VGDRFVDWLAENQPAKVDPMIEIAITPNRPDALGIYG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + S P+ + D D C F+ +KGV+N +P W Sbjct: 179 IARDLAARGLGTLKTPEFAPVTGSFPCPINVTIDEDTLDGCPLFSGRVIKGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR ISALVDITN+ + D+ P HVFDA+++S L V RA GE + ALD + Sbjct: 239 LQDRLTAIGLRPISALVDITNFFTFDQNRPLHVFDAAKVSGDLRVHRAAGGEVLKALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY P +VI+ D +SIAGI+GG+ GC + T DV +E A WD + IA +G+ L I Sbjct: 299 EYTFGPGQMVISDDNGAESIAGIMGGEETGCTEETVDVFLESAFWDHVQIALAGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + I L +IL LCGG AS++ IA ++ R V+ Sbjct: 359 SDARYRFERGVDPEFTIQGLHLATQMILELCGGEASEVVIAGDVPDHARAYKLDAERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P D + L RLGF + G +VPSWR DV+ +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESDQRQTLTRLGFRLEGNM----ANVPSWRPDVQGEADLVEEVARIASLTKLQ 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PL +T K ++ QQ R + +R AS EVV+++FI + + LFGGG Sbjct: 475 GKPLARMTDGIPKAVMTSQQRRQQMARRTAASLGYNEVVSYTFIDQASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS++MS+MR +LLPGLL+A RN R D A+FEV + P Q + GI Sbjct: 535 LANPISSEMSHMRPALLPGLLQAAARNQARGFMDLALFEVGPAFHGGEPGEQHNLITGIL 594 Query: 593 KGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G++G + G+ R VD FDAKAD +++ + ++ GA W+H Sbjct: 595 VGNTGPKDVHGA-----------ARGVDTFDAKADIEAILAAIGAPAKVQILRGAQDWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP +++ G+ P+ F ++ D +P+ +K T+ + Sbjct: 644 PGRHGKICLGPKKVLGIFGELHPKVINAMGVKGPVVAFTIWPDEVPLP-RKSGATRSALG 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S L V+RD AF+VD + A TLVN D+ LI DV +FD F G SLGEGKKS+A+ Sbjct: 703 QSDLQAVERDFAFVVDAEVEALTLVNAASGADKALITDVRIFDEFIGGSLGEGKKSLALT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T ++ DI + ++I+ V K T LR Sbjct: 763 VRLQPSDKTLKEKDIEAVSEKIIAKVTKATGGTLRG 798 >gi|163744822|ref|ZP_02152182.1| phenylalanyl-tRNA synthetase beta subunit [Oceanibulbus indolifex HEL-45] gi|161381640|gb|EDQ06049.1| phenylalanyl-tRNA synthetase beta subunit [Oceanibulbus indolifex HEL-45] Length = 798 Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust. Identities = 344/816 (42%), Positives = 482/816 (59%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT S+++I LT +GLEVE V+N A L+ FT+ V S E++PD D Sbjct: 1 MKFTLSWLKDHLDTTASIDEITYALTDLGLEVEGVENPAAKLADFTLGYVQSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++T +Q++CGAPN R G+ V A PG +P + + V KIRG+ES GMM Sbjct: 61 RLNVCQVET-DEGVMQIICGAPNARAGITVVVAKPGVYVPGIDTTIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSD-----PIIDVSLTPNRSDCIGVRG 173 SE+E+ LS++ I+ELP P G R D+L +D P+I++++TPNR D +GVRG Sbjct: 120 ASEREMELSEEHDGIIELPSGKP-GDRFIDWLAENDSAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLGKLK + S + P+ + D D C F +KGV+N +P W Sbjct: 179 IARDLAARGLGKLKPRDCDAVEGSFAAPISVSIDDDTLDGCPVFYGRVIKGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ L+A+GLR IS LVD+TN+ + DR P HVFDA ++ L V RA GE+I+ALD++ Sbjct: 239 LQDCLRAIGLRPISFLVDVTNFFTFDRNRPLHVFDADKVKGNLRVHRAKGGEEIVALDDK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L +VI+ D ++SIAGI+GG+ G ++T +V VE A WDP+ IA +G+ L I Sbjct: 299 TYTLQAGQMVISDDSGVESIAGIMGGEATGVTEDTVNVFVESAYWDPVQIAYAGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD ++H +IL GG AS++ +A + R ++V+ Sbjct: 359 SDARYRFERGVDPAWTPYGIEHATRMILDHAGGEASEVVVAGQVPDTRRAYKLDAAKVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+ +P D + L LGF + G+ VPSWR DV+ +ADLVEE+ RI + +++ Sbjct: 419 LVGMTIPESDQRQTLTALGFQLDGDM----AQVPSWRPDVQGEADLVEEVARIASLTKLE 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT + LS Q R +R A+ E V +SFI + + LFGGG E Sbjct: 475 GKPLPRLTSGVPRPVLSPMQRRVVTARRTAAALGYNECVTYSFIDQASAALFGGGTDETR 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS+DMS+MR LLPGLL+A RN R AD A+FEV + P ++ M +G+ Sbjct: 535 LENPISSDMSHMRPDLLPGLLQAAARNQARGFADMALFEVGPAFSGGEPGEEQMMVSGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VD+FDAKADA +V+ + ++ GA W+H Sbjct: 595 VGRTGPRDLHGA-----------ARAVDVFDAKADAEAVLAAIGAPAKVQILRGASEWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP +L + P F ++ +P+ +K T+ + Sbjct: 644 PGRHGKICLGPKKVLGVFGEVHPRVLAAMDVKGPAMAFTIWPAEVPLP-RKSGATRPALQ 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S L V+RD AF+VD + A LVN K D+ LI+DV VFD F G SLGEGKKS+AI Sbjct: 703 ISDLQAVERDFAFVVDADVEALALVNAAKGADKNLIEDVRVFDEFIGGSLGEGKKSLAIT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T +D DI + ++VE V K T VLR Sbjct: 763 VRLQPSDKTLKDADIEAVGAKVVEKVTKATGGVLRG 798 >gi|259415172|ref|ZP_05739094.1| phenylalanyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] gi|259349082|gb|EEW60836.1| phenylalanyl-tRNA synthetase, beta subunit [Silicibacter sp. TrichCH4B] Length = 798 Score = 612 bits (1578), Expect = e-173, Method: Compositional matrix adjust. Identities = 338/816 (41%), Positives = 477/816 (58%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+E+I +TLT +GLEVE+V N + L FT+ KV+ E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASVEEITETLTDLGLEVEEVVNPADMLGAFTLAKVVGAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ T E Q+VCGAPN R G+ V PG +P + ++V KIRG+ES GMM Sbjct: 61 RLRVCRVMT-DEGEKQIVCGAPNAREGITVVLCKPGDYVPGLDFTLSVGKIRGVESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 S KEL L +D I+ELP VG +L D+L DP +I++++TPNR D +G+ G Sbjct: 120 ASWKELTLGEDHDGIVELP-SGDVGDKLVDWLAAHDPSKVDPVIEIAITPNRPDALGIHG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + P+++ D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKATGYTPVEGQYESPIKVTIDEDTLDGCPLFTGRMIRGVKNGPSPKW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR ISALVDITN+ + D+ P HVFDA++++ L V RA GE++LALD + Sbjct: 239 LQDRLTAIGLRPISALVDITNFFTFDQNRPLHVFDAAKVTGNLRVHRAAGGEELLALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y + +VI+ D +SIAGI+GG+ GC D T DV +E A WD + IA +G+ L I Sbjct: 299 TYTMQAGQMVISDDNGAESIAGIMGGEETGCTDETVDVFLESAFWDHVQIATTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + L+ +IL LCGG S++ A ++ R V+ Sbjct: 359 SDARYRFERGVDPEYTYEGLERATQMILDLCGGEPSNVVSAGDVPDHSRAYRLNAERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P + + L RLGF + G VPSWR DV+ +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESEQRQTLTRLGFRLEGNL----AHVPSWRPDVQGEADLVEEVARIASLTKLE 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT ++ QQ R + +R AS EVV+++FI K + LFGGG Sbjct: 475 GKPLPRLTAGIPAPVMTPQQRRLQMARRTAASLGYNEVVSYTFIDKAAAGLFGGGTDVTM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS++R LLPGLL+A RN R AD ++FEV + P ++ +G+ Sbjct: 535 LANPISSEMSHLRPDLLPGLLQAAARNQARGFADVSLFEVGPAFTGGEPGEERIQISGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R W D++DAKADA +V+ + ++ +W+H Sbjct: 595 VNRNGPKDVHGASRNW-----------DVYDAKADAEAVLAAIGAPAKVQILREGDTWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + LG FGE HP +L G+ F +Y D IP+ + ++ + Sbjct: 644 PGRHGRICLGPKKTLGVFGELHPKVLSELGIKGTAVAFTIYPDEIPLP-RNTGASRSALA 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S L V+RD AF+VD + A TLVN D+ LI+DV VFD F G +LGEGKKS+AI Sbjct: 703 ISDLQAVERDFAFVVDAEVEALTLVNAAAGADKALIEDVRVFDEFIGGALGEGKKSLAIA 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP+ T + DI + ++IV V K T LR Sbjct: 763 VRLQPVDKTLTEKDIEAVSEKIVAKVSKATGGTLRG 798 >gi|126738863|ref|ZP_01754559.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. SK209-2-6] gi|126720044|gb|EBA16751.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. SK209-2-6] Length = 798 Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust. Identities = 343/816 (42%), Positives = 483/816 (59%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ S+++I +TLT +GLEVE++ N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLDTEASVDEIAETLTDLGLEVEEISNPADRLKDFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++T E+Q++CGAPN R G+ V PG IP ++ + V KIRG+ES GMM Sbjct: 61 KLRVCKVET-DEGEMQIICGAPNAREGITVVVCKPGMYIPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP VG R D+L + DP+I++++TPNR D +GV G Sbjct: 120 ASERELELSDEHDGIIELP-SGEVGDRFVDWLAENQPAKVDPVIEIAITPNRPDALGVYG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK S + P+ + D D C F +KGV+N +P W Sbjct: 179 IARDLAARGLGTLKTPEFEPVQGSFASPINVSIDEDTQDGCPLFTGRLIKGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RLKA+GLR ISALVDITN+ + D+ P HVFDA+++S L + RA GE + ALD + Sbjct: 239 LQDRLKAIGLRPISALVDITNFFTFDQNRPLHVFDAAKVSGDLRIHRAQGGETLKALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY +VI+ +SIAGI+GG+ GC + T DV +E A WD + IA +G+ L I Sbjct: 299 EYTFGAGQMVISDANGAESIAGIMGGEETGCTEETVDVFLESAFWDHVQIALTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + + L +I+ LCGG AS++ IA ++ R V+ Sbjct: 359 SDARYRFERGVDPEYTLEGLHQATRMIIELCGGEASEVVIAGDVPDHARAYKLDAGRVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++P D + L RLGF + G VPSWR DV+ +ADLVEE+ RI + ++K Sbjct: 419 LVGMEIPESDQRQTLTRLGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKLK 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PL +T K ++ QQ R + +R AS EVV ++FI K + LFGGG Sbjct: 475 GKPLARVTDGIPKPVMTPQQRRQQMARRTAASLGYNEVVGYTFIDKASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR +LLPGLL+A RN R D A+FEV + P Q + +GI Sbjct: 535 LANPISSEMSHMRPALLPGLLQAAARNQARGYMDQALFEVGPAFHGGEPGEQHNLISGIL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VD FDAKAD +++ + ++ GA SW+H Sbjct: 595 VGRNGPKDVHGA-----------SRDVDTFDAKADIEAILSAIGAPAKVQILRGAQSWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP ++ G+ P+ GF ++ D +P+ +K T+ + Sbjct: 644 PGRHGKICLGPKKVLGIFGELHPKVISEMGVKGPVVGFTIWPDEVPLP-RKSGATRAALE 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S L V+RD AF+VD+ + A TLVN D+ LI+DV VFD F G SLGEGKKS+A+ Sbjct: 703 ASDLQAVERDFAFVVDEGVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAMT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T ++ DI + ++I+ V K T LR Sbjct: 763 VRLQPSDKTLKEKDIEAVSEKIIAKVTKATGGTLRG 798 >gi|146278525|ref|YP_001168684.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter sphaeroides ATCC 17025] gi|145556766|gb|ABP71379.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacter sphaeroides ATCC 17025] Length = 805 Score = 608 bits (1569), Expect = e-172, Method: Compositional matrix adjust. Identities = 340/819 (41%), Positives = 484/819 (59%), Gaps = 29/819 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ L++I LT +G EVE V D + L F +V+ + +P+ D Sbjct: 1 MKFTLSWLKDHLETEAPLDEIVTALTDLGHEVEGVEDPAKVLGAFRTCRVIEAQPHPNAD 60 Query: 60 -CAILRIDT------GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + R++T G +E+QVVCGAPN R GL+GV+AP G+ +P + + IRG+ Sbjct: 61 RLRLCRVETWPDGPDGPSEEVQVVCGAPNARTGLVGVFAPVGTHVPGTGVDLKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSDD I++LP DAP+G R DY ++DP+I+V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDDHDGIIDLPPDAPLGVRFIDYKGVNDPVIEVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVAP 231 G+A DL A GLG + + I P+ + + C FA ++GV+N +P Sbjct: 181 GLARDLAARGLGTFRPLPIEPVPGRFPSPVSVTIAPELKGKGCPIFAGRTIRGVKNGPSP 240 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +W++ RL+AVGLR ISALVDITNY ++ P HVFD +RI L + A GE++LALD Sbjct: 241 DWLQARLRAVGLRPISALVDITNYFTIGLNRPLHVFDVARIKGGLRIHAAEGGEELLALD 300 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + Y + ++I+ + + +S+AGI+GG+ +GC + TT+V +E A WDPI IA +G+ L Sbjct: 301 GKSYTVRAGQMLISDEEQPESLAGIMGGELSGCTEETTEVFLESAYWDPITIAATGRALK 360 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 I++D+RYRFERGVD +P L+ +IL LCGG AS++ + + R F V Sbjct: 361 IVSDARYRFERGVDPAFTLPGLELATRMILDLCGGEASEVVMDGAVPDTSRAYRFDPKRV 420 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 RL G+D+P + LE LGF+ GE + PSWR DV+ +ADLVEEI R+ + + Sbjct: 421 VRLVGMDIPEAEQRATLEALGFTFDGEM----AAPPSWRPDVQGEADLVEEIARVASLTK 476 Query: 472 IKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +K +PLP Q K L+ Q R + +R LA+ E V +SFI + + LFGGG Sbjct: 477 LKGKPLPRAQAGVPKPILTTLQVREQTARRTLAALGYNECVTYSFIDEAAARLFGGGSEA 536 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NPIS++M+++R LLPGLL+A RN R AD A+ E+ V+ P Q+ A G Sbjct: 537 VRVENPISSEMTHLRPDLLPGLLRAAARNQARGFADIALCEIGPVFAGGEPGEQQLQATG 596 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ D R R VD++DAKADA +V+ + ++ P W+HP Sbjct: 597 LLVGAVAPR-------DPFGSR-RPVDVYDAKADAEAVLAAVGAPARMQISRKVPGWWHP 648 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GRSGI+ VL FGE HP IL + P F V + ++P+ K +T T+ + L Sbjct: 649 GRSGIVGLGPN-VLATFGEVHPRILREMDVKGPAVAFTVLVANVPLP-KVKTPTRPALKL 706 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGK----SLGEGKKSV 765 S L V+RD AF+VD + A LVN + D+ LI+ V VFD F G+ +G GKKS+ Sbjct: 707 SDLQAVERDFAFVVDASVEALALVNAAQGADKALIESVRVFDQFAGEKAEAQMGPGKKSL 766 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ V + P T D DI + +IVE V K T A LR Sbjct: 767 ALTVRLLPTDRTLNDKDIEAVSAKIVEKVSKATGATLRG 805 >gi|149913182|ref|ZP_01901716.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] gi|149813588|gb|EDM73414.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. AzwK-3b] Length = 799 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 337/817 (41%), Positives = 474/817 (58%), Gaps = 31/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ SL++I + LT +GLEVE + N A L FTI KV+ E++PD D Sbjct: 1 MKFTLSWLKDHLETEASLDEIAEVLTDLGLEVEDISNPAARLDQFTIGKVIKTEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++T Q++CGAPN R G+ V A PG +P + + V KIRGIES GMM Sbjct: 61 KLRVCQVETAD-GPTQIICGAPNAREGITVVVAKPGVYVPGIDTTIGVGKIRGIESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 CSE+E+ LS++ I+ELP VG R +D+L +DP +I++++TPNR D +GVRG Sbjct: 120 CSEREMELSEEHDGIIELP-SGEVGQRFTDWLAENDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVAPN 232 IALDL A GLG +K + + P+ + + D + C+ FA ++GV N +P Sbjct: 179 IALDLAARGLGTMKPAPKAHVEGAFPCPITVTIEEDAQQNGCEVFAGRLIRGVTNGPSPQ 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ RL+A+GLR ISALVD+TN+ + DR P HVFDA ++ L V R GE + LD Sbjct: 239 WLQDRLRAIGLRPISALVDVTNFFTFDRNRPLHVFDADKVQGNLRVHRTKGGETLTGLDE 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY P VVI+ D I+SI GI+GG GC D T +V +E A+WD + IA +G+ L I Sbjct: 299 KEYTFGPGMVVISDDAGIESIGGIMGGLATGCIDETVNVFLEAAVWDHVQIATTGRALRI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYR ERG+D + + +IL LCGG AS IA + R V+ Sbjct: 359 NSDARYRNERGIDPAFNMEAIDLATQMILDLCGGEASSTVIAGKVPDVSRAYRLDPERVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+D+P + R L LGF + G+ VPSWR D+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMDIPEAEQRRTLTALGFKLEGDM----AQVPSWRPDILGEADLVEEVARIASLTKL 474 Query: 473 KSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +PLP + + LS Q R + +R A R E V +SFI + LFGGG Sbjct: 475 VGKPLPRMKTGVPQPILSPMQKREQIARRTTAGRGYNECVTYSFIDHASATLFGGGHDAT 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS+D+S+MR LLPGLL+A RN R D A+FEV H + PE Q +G+ Sbjct: 535 MLANPISSDLSHMRPDLLPGLLQAAARNQARGHMDLALFEVGHAFHGGEPEEQHLQVSGL 594 Query: 592 ---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 R G + G+ R VD+FDAKADA +V+ + D ++ P W+ Sbjct: 595 LVGRTGPKDVHGA-----------MRPVDVFDAKADAEAVLAALGAPDKVQILRDGPDWF 643 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VLG FGE HP +L+ + P F ++ +P+ +KK T + + Sbjct: 644 HPGRHGRICLGPKKVLGIFGELHPRVLEAMDVKGPAVAFTLFPAELPLPRKK-TTGRGAL 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 + L V+RD AF+VD + A TLVN D+ +I+DV VFD F G SLGEG+KS+A+ Sbjct: 703 AIRDLQAVERDFAFVVDADVEALTLVNAAAGADKAMIEDVRVFDEFIGGSLGEGRKSLAV 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP++ T ++ +I + IVE V K T LR Sbjct: 763 TVRLQPVEATLKEAEIEAVSKAIVEKVEKATGGKLRG 799 >gi|85705994|ref|ZP_01037090.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius sp. 217] gi|85669582|gb|EAQ24447.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius sp. 217] Length = 799 Score = 606 bits (1562), Expect = e-171, Method: Compositional matrix adjust. Identities = 342/821 (41%), Positives = 470/821 (57%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T S+ +I +TLT +GLEVE + + A L FTI KVL E +PD D Sbjct: 1 MKFTLSWLKEHLETTASVTEIAETLTDLGLEVEGITDPAARLREFTIGKVLKAEPHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D E Q++CGAPN R G+ V A PG +P + + V KIRGIES Sbjct: 61 RLRVCQVATADG----ETQIICGAPNAREGITVVIAKPGVYVPGIDTTIGVGKIRGIESY 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LS++ I+ELP VG R +D+L DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSEEHDGIIELP-SGEVGERFTDWLATHDPAKVDPVIEIAITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNV 229 VRGIA+DL A GLG +K S P+ + D D ++ C+ FA ++GV+N Sbjct: 176 VRGIAVDLAARGLGTMKPAKTVDIEGQFSCPIGVTIDEDTATGGCEVFAGRLIRGVKNGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++QRL+A+GLR IS LVDITN+ + DR P HVFDA ++S L V R GE ++ Sbjct: 236 SPEWLQQRLRAIGLRPISTLVDITNFFTYDRNRPLHVFDADKVSSDLRVHRTTGGETLIG 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +EY P VVI+ D I+SI GI+GG GC D T +V +E A+WD + IA +G+ Sbjct: 296 LDEKEYTFGPGQVVISDDSGIESIGGIMGGLPTGCTDETVNVFLEAAVWDTVQIATTGRA 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYR ERG+D + L +IL LCGG S+ +A + R + Sbjct: 356 LRINSDARYRNERGIDPAFNMEALDLATQMILDLCGGVPSNRVVAGKVPDVSRAYRLDPA 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V+ L G+D+P + + L LGF + G VPSWR D+ +ADLVEE+ RI + Sbjct: 416 RVQSLVGMDIPESEQRQTLTALGFKIEGSM----AYVPSWRPDILGEADLVEEVARIASL 471 Query: 470 DQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++K P+ L V K LS Q R + +R A+ E V +SFI + LFGGG Sbjct: 472 TKLKGRPMARALPGVP-KPILSPMQKREQIARRTGAALGYNECVTYSFIDHAAATLFGGG 530 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + NPIS+DMS+MR LLPGLL+A RN R I D A+FEV H + P Q Sbjct: 531 DDATMLANPISSDMSHMRPDLLPGLLQAAARNQARGIMDLALFEVGHAFHGGEPGEQHLQ 590 Query: 588 AAGI---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 AG+ R G + G R VD+FDAKADA +++ + ++ Sbjct: 591 VAGLLVGRTGPKDVHGG-----------ARAVDVFDAKADAEAILSAIGAPSKVQILRDG 639 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P W+HPGR G I + VLG FGE HP IL + P F +Y IP+ +K + + Sbjct: 640 PVWFHPGRHGRICLGPKKVLGVFGEVHPRILQALDVKGPAVAFTLYPADIPLP-RKSSAS 698 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKK 763 + + +S L V+RD AF+VD I A TL+N D+ LI+DV +FD F G +LGEGKK Sbjct: 699 RGALDISDLQAVERDFAFVVDAQIEALTLINAASGADKALIEDVRIFDAFIGGNLGEGKK 758 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A+ V +QP T + +I + +I+E V K T VLR Sbjct: 759 SLALTVRLQPRDKTLTEAEIETVSAKIIEKVTKATGGVLRG 799 >gi|126728343|ref|ZP_01744159.1| phenylalanyl-tRNA synthetase beta subunit [Sagittula stellata E-37] gi|126711308|gb|EBA10358.1| phenylalanyl-tRNA synthetase beta subunit [Sagittula stellata E-37] Length = 799 Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust. Identities = 337/820 (41%), Positives = 472/820 (57%), Gaps = 37/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT S+++I +TLT +GLEVE+V D L FT+ KV+ E++PD D Sbjct: 1 MKFTLSWLKEHLDTTASVDEIAETLTDLGLEVEEVVDPASRLKAFTLAKVVHAEQHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C ++ D G E Q+VCGAPN R G+ V A PG +P + ++V IRG+ES Sbjct: 61 RLRVCKVM-TDEG---EKQIVCGAPNAREGITVVLAKPGDYVPGIDTTLSVGNIRGVESH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMM SE+EL LSD+ I+ELP VG +D+L +DP +I++++TPNR D +G Sbjct: 117 GMMASERELELSDEHTGIIELP-SGEVGQTFTDWLAQNDPAKVDPMIEIAITPNRQDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNV 229 V GIA DL A GLGKLK + P+ + D D ++ C+ FA ++GV+N Sbjct: 176 VHGIARDLAARGLGKLKPLKQEHVAGQYPCPISVTIDADSATDGCEIFAGRLIRGVQNAP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+ RL+A+GLR ISALVD+TN+ + DR P HVFDA ++ L + R GE + Sbjct: 236 SPKWLHDRLRAIGLRPISALVDVTNFFTHDRNRPLHVFDADKVQGGALRIHRTEGGETLT 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + Y P VVI+ I+SI GI+GG GC T +V +E A+WD I IA +G+ Sbjct: 296 GLDEKTYTFGPGQVVISDAAGIESIGGIMGGLSTGCTQETVNVFLEAAVWDRIQIAHTGR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L I +D+RYR ERG+D + ++ +IL LCGG S++ +A + R Sbjct: 356 ALKINSDARYRNERGIDPAYNMQAIEDATQMILDLCGGEPSEVVVAGRVPDTARAYRLDP 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + V L G+++P + + L RLGF + G VPSWR DV+ +ADLVEE+ R+ Sbjct: 416 ARVVSLVGMEIPESEQRQTLTRLGFRMEGNM----AHVPSWRPDVQGEADLVEEVARVAS 471 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + ++K +PL + LS Q R + +R A+ E V +SFI E + LFGGG Sbjct: 472 LTKLKGKPLARVPGVQRPILSPLQKREQLARRTAAALGYNECVTYSFIDSEAAGLFGGGD 531 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + NPIS+DMS+MR LLPGLL+A RN R AD A+FEV H + P Q M Sbjct: 532 DATMLANPISSDMSHMRPQLLPGLLRAAARNQARGFADVALFEVGHAFHGGEPGEQALMV 591 Query: 589 AGI---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +G+ R G + G+ R VD++DAKADA +V+ + ++ GA Sbjct: 592 SGLLVGRTGPKDVHGA-----------SRPVDVYDAKADAEAVLAAMSAPAKVQILRGAE 640 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 W+HPGR G + + VLG FGE HP +L + P F +Y +P+ +K T+ Sbjct: 641 GWWHPGRHGKLCLGPKKVLGVFGELHPRVLSAMDVKGPAVAFTLYPAEVPLP-RKAGATR 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKS 764 + L+ L V+RD AF+VD+ + A LVN + D+ LI DV VFD F G +LGEGKKS Sbjct: 700 PALALNDLQAVERDFAFVVDRDVEALMLVNAAQGADKALISDVRVFDEFIGGALGEGKKS 759 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +AI V +QP T ++ DI + +IVE V K T VLR Sbjct: 760 LAITVRLQPTDATLKEKDIEAVAAKIVEKVTKATGGVLRG 799 >gi|126725099|ref|ZP_01740942.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] gi|126706263|gb|EBA05353.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2150] Length = 803 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 340/817 (41%), Positives = 479/817 (58%), Gaps = 27/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD S+++I LT +GLEVE V N E L FTI V E++PD D Sbjct: 1 MKFTLSWLKKHLETDASVDEILYALTDLGLEVEDVVNPAETLKDFTIGYVNHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V A PG +P + + V KIRG+ES GMM Sbjct: 61 KLRVCKVDT-DEGELQIICGAPNAREGIHVVVAKPGVYVPGIDTTIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 SE+E+ LSD+ I+EL VG R DYL DP+I++++TPNR D +GVRG Sbjct: 120 ASEREMELSDEHDGIIELEGAPEVGSRFVDYLAEHNPGAVDPMIEIAITPNRPDALGVRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A DL A GLG LK +++ + P+ + D D C F +KGV+N +P W Sbjct: 180 VARDLAARGLGTLKPLDVPHIEGGFASPVGVSIDEDTLDGCPVFYGRVIKGVKNGPSPVW 239 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++Q LKA+GLR IS LVDITNY + D+ P HVFD ++S L V RA GE+I+ALD++ Sbjct: 240 LQQALKAIGLRPISTLVDITNYFTYDQNRPLHVFDVDKMSGDLRVHRAKGGEEIVALDDK 299 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L+ + I+ D ++SIAG++GG GC T +V VE A WDP+ IA +G+ L I Sbjct: 300 TYSLNEGMMGISDDNSVESIAGVMGGAETGCTPETVNVFVESAYWDPVTIAVTGRKLKIN 359 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + +P L+ +I+ LCGG AS++ A + R V+ Sbjct: 360 SDARYRFERGVDPEWTLPGLELATQMIMDLCGGEASELVSAGAVPNTARSYKLDAKRVQS 419 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++ + + L LGF + G+ + VPSWR DV ADLVEE+ RI + ++K Sbjct: 420 LVGMEISEAEQRQTLTALGFKLEGD----QAHVPSWRPDVLGSADLVEEVARIASLTKLK 475 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +P + L+ Q R + +R A+ E V +SFI ++ + LFGGG Sbjct: 476 GKPFARAMEGVPSAILTPMQKREQIARRTNAALGYNECVTYSFIDQKSAALFGGGSDATM 535 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS++MS+MR SLLPGLL+A RN R AD A+FEV V+ PE Q+ + AGI Sbjct: 536 LENPISSEMSHMRPSLLPGLLQAAARNQARGFADMALFEVGPVFHGGEPEDQELLVAGIL 595 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G +G + D R R VD+FDAKADA +++ + + GA W+H GR Sbjct: 596 VGHTGPK-------DVHGTR-RAVDVFDAKADAEAILAAIGAPAKQMVQRGAKGWWHSGR 647 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG + + +L FGE HP L + P+ GF ++L ++P K +T T+ + L Sbjct: 648 SGRLSLGPKNILCAFGELHPKTLGVMDVKGPVVGFAIHLANVPFP-KSKTATRSALTLRD 706 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGK----SLGEGKKSVAI 767 L V RD AF+VD+ + A TLVN D+ LID V+VFD F+G+ +GEGKKS+AI Sbjct: 707 LQAVDRDFAFVVDEKVEALTLVNAAAGADKALIDAVSVFDEFKGEKAEAQMGEGKKSLAI 766 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP + T D+ I + ++I+ V K T VLR Sbjct: 767 TVRLQPTEKTLTDEQIEAVSEKIIAKVSKSTGGVLRG 803 >gi|114769960|ref|ZP_01447570.1| phenylalanyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] gi|114549665|gb|EAU52547.1| phenylalanyl-tRNA synthetase beta subunit [alpha proteobacterium HTCC2255] Length = 804 Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust. Identities = 345/818 (42%), Positives = 488/818 (59%), Gaps = 30/818 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL TD SL I + LT +GLEVE V+N + L FT+ V + E++PD D Sbjct: 1 MKFTLSWLKEHLKTDASLNDITEALTDLGLEVEGVENPLDKLENFTVGYVSNAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V A PG +P ++ + V KIRGIES GMM Sbjct: 61 KLRVCKVDT-DEGELQIICGAPNAREGIYVVVAKPGVYVPGLDITIGVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYL-----ELSDPIIDVSLTPNRSDCIGVRG 173 SE+E+ LSD+ I+EL + VG + DYL E DPII++++TPNR D +GVRG Sbjct: 120 ASEREMELSDEHDGIIELDGNPAVGSKFVDYLKKNRPESVDPIIEIAITPNRPDALGVRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL--CKGFAMCCVKGVRNNVAP 231 IA DL A G+G+L + + P E ++ +D ++L C F +KGV+N +P Sbjct: 180 IARDLAARGVGELINRD-TVPQIDEKFTSNLEVSIDSNTLDGCPLFVGREIKGVKNGPSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +W++ L+A+GLR IS LVDITNY + DR P HVFD ++S L + +A GE I ALD Sbjct: 239 DWLQAALRAIGLRPISLLVDITNYYTYDRNRPLHVFDMDKVSGNLRIHKAEGGETITALD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++EY L D ++I+ D ++SIAGI+GG GCD++T +V VE A WDP IA +G+ L Sbjct: 299 DKEYVLQKDMMIISDDNGVESIAGIMGGLDTGCDESTINVFVESAYWDPTKIAITGRKLK 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 I +D+RYRFERGVD I H V+LI GG AS + A + R + + Sbjct: 359 INSDARYRFERGVDPLFTINGCDHAVTLIQKYGGGEASALVKAGAVPDVSRSYTLDTNRI 418 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + L G+++ ED ++ L LGF + G+ + VPSWR D+ ADLVEE+ RI + + Sbjct: 419 ESLVGMEISSEDQIKYLTDLGFIIKGD----QAQVPSWRPDILGSADLVEEVARIASLTK 474 Query: 472 IKSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + PLP L + K L+ Q R +R +A+ E V +SFI K+ + LFGGG + Sbjct: 475 LVGVPLPQLAEGVPKPILTPMQRREAMARRTIAALGYNECVTYSFIDKKSAELFGGGAND 534 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + I NPIS++MS+MR SLLPGLL+A RN R + D A+FEV V+ PE Q+ +A+G Sbjct: 535 VMIGNPISSEMSHMRPSLLPGLLQAVQRNQARGVMDLALFEVGPVFHGGEPEEQELLASG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G +G + + R VD FDAKADA +V+ + D L GA SW+HP Sbjct: 595 LLVGHTGPRDAFGVR--------RPVDAFDAKADAEAVLSAIGAPDKLMVLRGAKSWWHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GRSG + + ++ FGE HP I++ F + P F ++L++ P+ KK+T T+ + Sbjct: 647 GRSGKLSLGPKNIMCAFGELHPKIVEAFNIKGPAVAFAIHLENPPLP-KKKTTTRAALKT 705 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSLGEGKKSV 765 S V RD AF+VD + A +++N K D+ LI D VFDVF G +G KKS+ Sbjct: 706 SDFQSVDRDFAFVVDNKVEALSVLNAAKGADKSLITDAHVFDVFDGVKADGQMGLDKKSI 765 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI V +QP T D DI + ++I+E V K T VLR Sbjct: 766 AITVKLQPKDATLTDKDIEAVSEKIIEKVTKATGGVLR 803 >gi|114765514|ref|ZP_01444622.1| phenylalanyl-tRNA synthetase beta subunit [Pelagibaca bermudensis HTCC2601] gi|114542107|gb|EAU45139.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius sp. HTCC2601] Length = 798 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 341/822 (41%), Positives = 480/822 (58%), Gaps = 42/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT S+++I + LT +GLEVE V+N E L+ FTI KVL E++PD D Sbjct: 1 MKFTLSWLKEHLDTTASVDEITEALTDLGLEVEGVENPAERLAAFTIGKVLKAEKHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C +L D G E Q++CGAPN R G+ V A PG+ +P + + V KIRGIES Sbjct: 61 KLRVCTVL-TDEG---ESQIICGAPNAREGITVVIAKPGTYVPGIDTTIQVGKIRGIESF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LS++ I+EL VG +D+L +DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSEEHDGIIEL-ASGEVGQSFTDWLAENDPAKVDPVIEIAITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLS-SESIPLEIKFDLDDSSL--CKGFAMCCVKGVRN 227 V GIA DL A GLG LK + P++ + S P I ++DS+ C F +KGV+N Sbjct: 176 VEGIARDLAARGLGTLKPLT---PVTVAGSFPCPISVTIEDSAKDGCPVFYGRVIKGVKN 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P W++ RLKA+GLR IS LVD+TN+ + DR P HVFDA ++ L V A GE + Sbjct: 233 GPSPQWLQDRLKAIGLRPISFLVDVTNFFTFDRNRPLHVFDADKVQGNLRVHAAEGGETL 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD + Y + P ++I++D +S+ G++GG+ G D T +V +E A +DPI A +G Sbjct: 293 EALDERTYTMEPGMILISADSGPESLGGVMGGEPTGVSDETVNVFLEAAYFDPIRTAYTG 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L I +D+RYRFERG+D P ++ +IL + GG AS++ +A R Sbjct: 353 RGLKINSDARYRFERGIDPASAQPGIEAATRMILDIAGGEASEVVVAGETPDVSRAYKLD 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V L G+++P ++ LE LGF++ G+ VPSWR DV +ADLVEE+ R+ Sbjct: 413 TDRVVSLVGMEIPADEQRATLEALGFTLEGDM----AHVPSWRPDVMGEADLVEEVARVA 468 Query: 468 GVDQIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++K +P+P Q LS Q R + +R +A E V +SFI K + LFGG Sbjct: 469 SLTKLKGQPMPRPQAGVPAPILSPMQKREQIARRTVAELGYNECVTYSFIDKAAAELFGG 528 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G + NPIS++MS+MR LLPGLL+A RN R AD A+FEV ++ PE Q Sbjct: 529 GDDATMLANPISSEMSHMRPQLLPGLLQAAARNQARGFADLALFEVGAAFQGGEPEEQHT 588 Query: 587 MAAGIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 G+ G SG + G+ R VD+FDAKADA +V+ + ++ G Sbjct: 589 QITGLLVGRSGPKDVHGA-----------SRPVDIFDAKADAEAVLSAIGAPAKMQILRG 637 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A W+HPGR G + + VLG FGE HP +L G+ P GF +Y IP+ + K + Sbjct: 638 AEEWWHPGRHGKLCLGPKKVLGVFGEIHPKVLAELGVKGPAVGFTLYPSEIPLPRSKGSG 697 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGK 762 + + L+ L V+RD AF+VD + A LVN D+ LI++V VFD F G SLGEGK Sbjct: 698 -RPALKLNDLQAVERDFAFVVDADVAALDLVNAAAGADKALIEEVRVFDEFIGGSLGEGK 756 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KS+AI V +QP T ++ DI + +IVE V K T LR Sbjct: 757 KSLAITVRLQPSDATLKEKDIEAVGAKIVEKVTKATGGTLRG 798 >gi|254477329|ref|ZP_05090715.1| phenylalanyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] gi|214031572|gb|EEB72407.1| phenylalanyl-tRNA synthetase, beta subunit [Ruegeria sp. R11] Length = 798 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 344/816 (42%), Positives = 475/816 (58%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD S+E+I +TLT +GLEVE V N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLETDASVEEITETLTDLGLEVEGVSNPADRLKEFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V PG +P ++ + V KIRG+ES GMM Sbjct: 61 KLRVCKVDT-DEGEMQIICGAPNAREGITVVVCKPGMYVPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP VG R D+L +DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSDEHDGIIELP-SGEVGDRFVDWLAANDPSKVDPMIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + + P++++ D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPLTVDPVEGGYESPIKVEIAEDTLDGCPLFTGRLIRGVKNGQSPKW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR ISALVDITNY + D P HVFDA++++ L V RA GE ++ALD + Sbjct: 239 LQDRLTAIGLRPISALVDITNYFTFDLNRPLHVFDAAKVAGNLRVHRAAGGETLVALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY LS +VI+ D +SIAGI+GG GC D T DV +E A WD + IA +G+ L I Sbjct: 299 EYTLSAGQMVISDDNGAESIAGIMGGAETGCTDETVDVFLESAFWDHVQIATTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + L +IL LCGG S++ +A + R V+ Sbjct: 359 SDARYRFERGVDPEFTRDGLDLATRMILDLCGGEPSNVVVAGAVPDHSRAYKLNPERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++P + + L RLGF + G VPSWR DV +ADLVEE+ RI + +++ Sbjct: 419 LVGMEIPEAEQRQTLTRLGFRLEGNM----AHVPSWRPDVLGEADLVEEVARIASLTKLQ 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT ++ QQ R + +R AS E+V+++FI + + LFGGG Sbjct: 475 GKPLPRLTDGIPAPVMTPQQRRQQIARRTCASLGYNEIVSYTFIDQASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR +LLPGLL+A RN R AD A+FEV + P Q + +G+ Sbjct: 535 LANPISSEMSHMRPALLPGLLQAAARNQARGFADMALFEVGPAFHGGEPGEQHNLISGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VD FDAKAD +V+ + ++ GA W+H Sbjct: 595 VGRTGPKDVHGA-----------SRAVDTFDAKADIEAVLAAIGAPAKVQILRGAEPWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP +L G+ F ++ D +P+ +K +V Sbjct: 644 PGRHGKICLGPKKVLGVFGELHPKVLSEMGIKGAAVAFTIWPDEVPMPRKSGASRGALVQ 703 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S L V+RD AF+VD + A TLVN D+ LI+DV VFD F G SLGEGKKS+AI Sbjct: 704 -SDLQAVERDFAFVVDDTVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAIT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP T + DI + D+IV V K T LR Sbjct: 763 ARLQPTDKTLTEKDIEAVSDKIVAKVTKATGGTLRG 798 >gi|84514567|ref|ZP_01001931.1| phenylalanyl-tRNA synthetase, beta subunit [Loktanella vestfoldensis SKA53] gi|84511618|gb|EAQ08071.1| phenylalanyl-tRNA synthetase, beta subunit [Loktanella vestfoldensis SKA53] Length = 798 Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust. Identities = 337/813 (41%), Positives = 471/813 (57%), Gaps = 24/813 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD S++ I +TLT +GLEVE V+N E L+ FTI V S E++PD D Sbjct: 1 MKFTLSWLKHHLETDASVDLIAETLTDLGLEVEGVENPAERLADFTIGYVESAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ T K Q++CGAPN R G+ V A PG+ +P + + V KIRGIES GMM Sbjct: 61 KLRVCQVQT-KDGLTQIICGAPNARAGITVVIASPGTYVPGIDTTIGVGKIRGIESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYL-----ELSDPIIDVSLTPNRSDCIGVRG 173 CSE+E+ LS++ I+ELP VG +D+L E DP+I++++TPNR D +GV G Sbjct: 120 CSEREMELSEEHDGIIELP-SGTVGQTFTDWLAQNQPEKVDPVIEIAITPNRPDALGVYG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + I +S + L + D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPLTIDPVPASFTADLSVSIDDDTHDGCPVFCGRLIRGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ +L+A+GLR IS LVD+TN+ + D P HVFDA ++ L V RA GE ILALD++ Sbjct: 239 LQTQLRAIGLRPISFLVDVTNWFTYDLNRPLHVFDADKVQGDLRVHRAKGGETILALDDK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L + I+ D + SIAGI+GG GC D T +V VE A WDPI IA +G+ L I Sbjct: 299 TYTLQAGQIAISDDHGVASIAGIMGGDATGCTDETVNVFVESAYWDPIQIAYTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERG+D L+H V +I+ GG AS++ IA + R + Sbjct: 359 SDARYRFERGIDPAFTPEGLEHAVRMIVDHAGGEASELIIAGAVPDTSRAYRLDAQRLIS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P + L LGF + G+ VPSWR DV+ ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESTQRQTLTALGFRLEGDM----AHVPSWRPDVQGDADLVEEVARIASLTKLQ 474 Query: 474 SEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +P+P K L+ Q R + +R +A+ E V +SF+ + + LFGGG Sbjct: 475 GKPMPRMDAGVPKPILTAGQQRQQSARRTMAALGYNECVTYSFVDAQAATLFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS+++S+MR +LLPGLL+A RN R D A+FEV + P Q + G+ Sbjct: 535 LENPISSELSHMRPNLLPGLLRAAARNQARGFMDMALFEVGAGFHGGEPGEQHNLITGVL 594 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G + S R VDL+DAKADA SV+ + ++ GA W+HPGR Sbjct: 595 IGKTA--------SKDVHGTSRAVDLYDAKADAESVLAAIGAPAKVQILRGAADWWHPGR 646 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 G+I + VL FGE HP +L + P GF ++ D +P+ K +T T+ + + Sbjct: 647 HGMICLGPKKVLAVFGELHPKVLREMDIKGPAVGFTIWPDEVPVP-KSKTNTRPALVATD 705 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 L V+RD AF+V + A TLVN D+ LI DV VFD F G +LGEGKKS+A+ V + Sbjct: 706 LQAVERDFAFVVGADVEALTLVNAALGADKALITDVRVFDQFIGGNLGEGKKSLAVTVRL 765 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 QP T +D DI + +IV+ V K T +LR Sbjct: 766 QPTTTTLKDADIEAVSAKIVDKVTKATGGILRG 798 >gi|294678667|ref|YP_003579282.1| phenylalanyl-tRNA synthetase subunit beta [Rhodobacter capsulatus SB 1003] gi|294477487|gb|ADE86875.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacter capsulatus SB 1003] Length = 806 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 342/821 (41%), Positives = 486/821 (59%), Gaps = 34/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ S+ +I D LT +GLEVE+V N A L+PFTI KVL E++PD D Sbjct: 1 MKFTLSWLKDHLETEASVTEIADALTDLGLEVEEVVNPGAKLAPFTIAKVLHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ T + +++ +VCGAPN R G+ V A PG +P + + + KIRGIES GMM Sbjct: 61 KLRVCRVLTDEGEKV-IVCGAPNARAGITVVLAKPGDYVPGIDTTLGIGKIRGIESHGMM 119 Query: 119 CSEKELMLSDDSASIMELP---IDAPVGGRLSDYL-----ELSDPIIDVSLTPNRSDCIG 170 CSE+EL LSD+ I+ELP +++ VG + D+L E DP+I + +TPNR D +G Sbjct: 120 CSERELELSDEHNGIIELPEDSLNSEVGCKFIDWLAENRPEAVDPMIHIKITPNRPDALG 179 Query: 171 VRGIALDLVAAGLGKLKEINI-SCPLSSES-IPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 VRG+A DL A GLG+LK + I + P ES I +EI L + C FA ++GV+N Sbjct: 180 VRGVARDLAARGLGRLKPLEIEAVPGGFESPIKVEIDATLKEKG-CPLFAGRLIRGVKNG 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P+W++ RL+A+GLR ISALVDITN+ + D P HVFDA++++ L + A GE++L Sbjct: 239 PSPDWLQARLRAIGLRPISALVDITNFFTYDLNRPLHVFDAAKVAGNLRIVPAKGGEELL 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 ALD + Y L P +VI D + +S+AGI+GG+ +GC + T DV +E A WDPI IA +G+ Sbjct: 299 ALDGKTYTLRPGQMVICDDAQPESLAGIMGGELSGCTEETVDVFLESAYWDPITIATTGR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L I +D+RYRFERGVD + +P L+ ++L LCGG AS++ + + R Sbjct: 359 ALKINSDARYRFERGVDPEFTLPGLELATQMVLDLCGGEASNVVMDGAVPDTKRAYKLDP 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + V L G+++P L LGF+ G+ PSWR DV +ADLVEE+ RI Sbjct: 419 ARVISLVGMEIPEATQRETLTALGFTFEGDM----ACPPSWRPDVLGEADLVEEVARIAS 474 Query: 469 VDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + ++ P+ T L+ Q+R R +R +A+ E V +SFI + + LFGGG Sbjct: 475 LTKLVGRPMARETTGVPGPVLTPIQTRERTARRTIAALGYNECVTYSFIDAKSAALFGGG 534 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 I NPIS++M+++R LLPGLL+A RN R AD A+FEV + P Q Sbjct: 535 LEATRIENPISSEMTHLRPDLLPGLLQAAARNQARGFADLALFEVGPAFSGGEPGDQALQ 594 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AAG+ G+S W+ + R VDL+DAKAD +V+ + ++ W Sbjct: 595 AAGLLVGASAPRDP---WASR-----RPVDLYDAKADVEAVLAAIGAPARVQINRKVAGW 646 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGRSG I L FGE HP +L G+ P F V+++++P K +T T+ Sbjct: 647 FHPGRSGTIALGPN-ALASFGEVHPKVLREMGVKGPAVAFTVWIEAVPFP-KAKTPTRPA 704 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSLGEGK 762 + LS L V+RD AF+VD + A T VN D+ LI+ V+VFD F G + +G GK Sbjct: 705 LALSDLQAVERDFAFVVDAGVEALTAVNAAYGADKALIEAVSVFDQFTGAKAEEQMGAGK 764 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ V +QP T D +I + ++VE V K T V R Sbjct: 765 KSIALSVRLQPRDKTLTDAEIEAVSAKVVEKVTKATGGVQR 805 >gi|163742129|ref|ZP_02149517.1| phenylalanyl-tRNA synthetase beta subunit [Phaeobacter gallaeciensis 2.10] gi|161384459|gb|EDQ08840.1| phenylalanyl-tRNA synthetase beta subunit [Phaeobacter gallaeciensis 2.10] Length = 798 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 347/816 (42%), Positives = 470/816 (57%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD S+E I +TLT +GLEVE V N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLETDASVEDITETLTDLGLEVEGVSNPADRLKDFTLGHVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V PG IP ++ + V KIRG+ES GMM Sbjct: 61 KLRVCKVDT-DEGEMQIICGAPNAREGITVVVCKPGMYIPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP VG R D+L + DP+I++++TPNR D +GVRG Sbjct: 120 ASERELELSDEHDGIIELP-SGEVGDRFVDWLAQNAPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + I PL++ D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPLTIEPVDGVYESPLKVDIAEDTLDGCPLFTGRLIRGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR IS LVDITNY + D+ P HVFDA++++ L V RA GE + ALD + Sbjct: 239 LQDRLSAIGLRPISTLVDITNYFTFDQNRPLHVFDAAKVAGNLRVHRAVGGETLTALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +Y LS +VI+ D +SIAGI+GG GC + TTDV +E A WD + IA +G+ L I Sbjct: 299 DYTLSEGQMVISDDNGAESIAGIMGGVATGCTEETTDVFLESAFWDHVQIATTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + L H +IL LCGG S++ A + R V+ Sbjct: 359 SDARYRFERGVDPEYTRDGLDHATRMILDLCGGEPSNVVTAGAVPEHARAYKLDPERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P + + L RLGF + G VPSWR DV +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESEQRQTLTRLGFRLEGNM----AHVPSWRPDVMGEADLVEEVARIASLTKLE 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT ++ QQ R + +R AS EVV+++FI K + LFGGG Sbjct: 475 GKPLPRLTDGVPAPVMTPQQRRQQIARRTCASLGYNEVVSYTFIDKASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR +LLPGLL+A RN R D A+FE + P Q + +G+ Sbjct: 535 LANPISSEMSHMRPALLPGLLQAAARNQARGFMDLALFEAGPAFHGGEPGEQHNLISGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VD FDAKAD +V+ + ++ GA SW+H Sbjct: 595 VGRTGPKDVHGA-----------SRAVDTFDAKADIEAVLAAIGAPAKVQILRGAQSWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP +L G+ F ++ D +P+ +K +V Sbjct: 644 PGRHGKICLGPKKVLGVFGELHPKVLSEMGIKGSAVAFTIWPDEVPMPRKSGANRGALVQ 703 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S L V+RD AF+V + A TLVN D+ LIDDV VFD F G SLGEG KS+AI Sbjct: 704 -SDLQAVERDFAFVVADDVEALTLVNAAVGADKALIDDVRVFDEFIGGSLGEGSKSLAIT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T + DI + +IV V K T LR Sbjct: 763 VRLQPTDKTLTEKDIEAVSAKIVAKVTKATGGTLRG 798 >gi|255263846|ref|ZP_05343188.1| phenylalanyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] gi|255106181|gb|EET48855.1| phenylalanyl-tRNA synthetase, beta subunit [Thalassiobium sp. R2A62] Length = 798 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 345/819 (42%), Positives = 474/819 (57%), Gaps = 36/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+TD +L+ I DTLT +GLEVE V+N A LS FTI V S E++PD D Sbjct: 1 MKFTLSWLKNHLETDATLDVILDTLTDLGLEVEGVENPAARLSEFTIGYVNSAEKHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + + D G E Q++CGAPN R G+ V A PG +P + + V KIRGIES Sbjct: 61 KLRVCQV-QTDEG---ETQIICGAPNARQGITVVIAKPGVYVPGIDTTIGVGKIRGIESF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LS++ I+ELP + VG D+L +DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSEEHDGIIELP-NGEVGQSFVDWLAQNDPAKVDPVIEIAITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 VRG+A DL A GLG LK + ++ + +++ D D + C F + GV+N + Sbjct: 176 VRGVARDLAARGLGTLKPLPVTPVAGNGPSSVDVIIDADTTDGCPVFMGRVISGVKNGPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W++ L+A+GLR IS LVDITNY + D+ P HVFD ++ L V RA GE I+AL Sbjct: 236 PAWLQDMLRAIGLRPISVLVDITNYFTYDQNRPLHVFDVDKMQGNLRVHRAEGGETIVAL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D++EY L+ +VI+ D +SIAGIIGG GC D TT V +E A W+ I IA +G+ L Sbjct: 296 DDKEYTLAAGQMVISDDNGPESIAGIIGGAVTGCSDETTTVFLESAFWNNIQIALTGRAL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 I +D+RYRFERG+D L+ ++L LCGG ASD+ + I R Sbjct: 356 KINSDARYRFERGIDPAWTANGLELATQMVLDLCGGEASDVVVVGAIPDVSRSYKLDTDR 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V+ L G+ +P + L LGF + G+ + VPSWR DV +ADLVEE+ RI + Sbjct: 416 VQSLVGMTIPADTQRATLTALGFEIDGD----QAHVPSWRPDVLGEADLVEEVARIASLT 471 Query: 471 QIKSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 +++ PLP +T+ L+ Q R + V+R +A E V +SFI + + LFGGG Sbjct: 472 RLEGRPLPRITEGLPTPVLTPIQRREQIVRRTIAQLGYNECVTYSFIDQPSAELFGGGTD 531 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + NPIS +MS+MR ++LPGLL+A RN R AD A+FE+ + P Q A Sbjct: 532 ATRLENPISYEMSHMRPTVLPGLLQAAARNQARGFADMALFEIGAAFHGGEPGEQHLQAT 591 Query: 590 GI---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 G+ R G + GS R VD+FD KADA +V+ + ++ G Sbjct: 592 GLLVGRTGPKDVHGS-----------ARAVDVFDVKADAEAVLAAIGAPAKVQIMRGVDD 640 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +HPGR G I ++VLG FGE HP IL G+ P F ++ +P+ K + + Sbjct: 641 TWHPGRHGKICLGPKMVLGIFGEIHPKILTEMGVKGPAMAFTLWPAEVPMP-KNESVNRG 699 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 V L V+RD AF+VD + A TLVN D+ LID+V VFD F G SLGEGKKS+ Sbjct: 700 AVTAPDLQAVERDFAFVVDTDVEALTLVNAAAGADKALIDNVRVFDEFIGGSLGEGKKSL 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 AI V +QP + T +D DI + +IVE V K T VLR Sbjct: 760 AIAVRLQPTEATLKDADIEAVSTKIVEKVSKATGGVLRG 798 >gi|163738461|ref|ZP_02145876.1| phenylalanyl-tRNA synthetase, beta subunit [Phaeobacter gallaeciensis BS107] gi|161388382|gb|EDQ12736.1| phenylalanyl-tRNA synthetase, beta subunit [Phaeobacter gallaeciensis BS107] Length = 798 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 347/816 (42%), Positives = 470/816 (57%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD S+E I +TLT +GLEVE V N + L FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLETDASVEDITETLTDLGLEVEGVSNPADRLKDFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V PG IP ++ + V KIRG+ES GMM Sbjct: 61 KLRVCKVDT-DEGEMQIICGAPNAREGITVVVCKPGMYIPGLDITIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 SE+EL LSD+ I+ELP VG R D+L + DP+I++++TPNR D +GVRG Sbjct: 120 ASERELELSDEHDGIIELP-SGEVGDRFVDWLAQNAPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK + I PL++ D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPLAIEPVEGGYDSPLKVDIAEDTLDGCPLFTGRLIRGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR IS LVDITNY + D+ P HVFDA++++ L V RA GE + ALD + Sbjct: 239 LQDRLSAIGLRPISTLVDITNYFTFDQNRPLHVFDAAKVAGNLRVHRAVGGETLTALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +Y LS +VI+ D +SIAGI+GG GC + TTDV +E A WD + IA +G+ L I Sbjct: 299 DYTLSEGQMVISDDNGAESIAGIMGGVATGCTEETTDVFLESAFWDHVQIATTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + L H +IL LCGG S++ A + R V+ Sbjct: 359 SDARYRFERGVDPEYTRDGLDHATRMILDLCGGEPSNVVTAGAVPEHARAYKLDPERVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P + + L RLGF + G VPSWR DV +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIPESEQRQTLTRLGFRLEGNM----AHVPSWRPDVMGEADLVEEVARIASLTKLE 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT ++ QQ R + +R AS EVV+++FI K + LFGGG Sbjct: 475 GKPLPRLTDGVPAPVMTPQQRRQQIARRTCASLGYNEVVSYTFIDKASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR +LLPGLL+A RN R D A+FE + P Q + +G+ Sbjct: 535 LANPISSEMSHMRPALLPGLLQAAARNQARGFMDLALFEAGPAFHGGEPGEQHNLISGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VD FDAKAD +V+ + ++ GA SW+H Sbjct: 595 VGRTGPKDVHGA-----------SRAVDTFDAKADIEAVLAAIGAPAKVQILRGAQSWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP +L G+ F ++ D +P+ +K +V Sbjct: 644 PGRHGKICLGPKKVLGVFGELHPKVLSEMGIKGSAVAFTIWPDEVPMPRKSGANRGALVQ 703 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S L V+RD AF+V + A TLVN D+ LIDDV VFD F G SLGEG KS+AI Sbjct: 704 -SDLQAVERDFAFVVADDVEALTLVNAAVGADKALIDDVRVFDEFIGGSLGEGSKSLAIT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T + DI + +IV V K T LR Sbjct: 763 VRLQPTDKTLTEKDIEAVSAKIVAKVTKATGGTLRG 798 >gi|260576208|ref|ZP_05844200.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] gi|259021476|gb|EEW24780.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacter sp. SW2] Length = 805 Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust. Identities = 340/821 (41%), Positives = 477/821 (58%), Gaps = 33/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T L+ I LT +G EVE V+N E L F I +V+ +P+ D Sbjct: 1 MKFTLSWLKDHLETSAPLDAILYALTDLGHEVEGVENPEDTLGAFRICRVIEAVPHPNAD 60 Query: 60 -CAILRIDT------GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + R++T G QE+QVVCGAPN R GL+GV+AP G+ +P + V IRG+ Sbjct: 61 RLRLCRVETWPDGPQGGSQEVQVVCGAPNARTGLIGVFAPVGTHVPGTGVDVKPGVIRGV 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CSE+ELMLSD+ I++LP DAP+G R DY ++DP+I V +TPNR D +GVR Sbjct: 121 ESNGMLCSERELMLSDNHDGIIDLPADAPLGVRFIDYKGVNDPMIYVKITPNRPDGLGVR 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG---FAMCCVKGVRNNV 229 G+A DL A GLG LK + I P+ P I +D + KG FA ++GV+N Sbjct: 181 GLARDLAARGLGTLKPLEIH-PVEGH-FPSPIGVHIDPALKAKGCPLFAGRTIRGVKNGA 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P+W+ RLKA+GLR ISALVDITNY + P HVFD +++ L + A GE++LA Sbjct: 239 SPDWLAARLKAIGLRPISALVDITNYFTFGLNRPLHVFDVAKVRGDLRIHPAAGGEELLA 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + Y L P +VI+ D +S+AGI+GG+ +GC TTDV +E A WDPI +A +G+ Sbjct: 299 LDGKTYSLRPGMMVISDDNGPESLAGIMGGEASGCSPETTDVFLESAYWDPITVATTGRA 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYRFERGVD +P L+ +IL LCGG AS + + + R + Sbjct: 359 LKINSDARYRFERGVDPAFTLPGLELATQMILDLCGGEASTVVVDGAVPDTKRSYKLDPA 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V L G+++ + + L LGFS+ G+ + + PSWR DV +ADLVEE+ R+ + Sbjct: 419 RVVSLVGMEISEAEQRQTLTALGFSLRGD----QATPPSWRPDVLGEADLVEEVARVASL 474 Query: 470 DQIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++ +PL Q R L+ QSR + +R LA E V +SFI K+ S LFGGG Sbjct: 475 SKLVGKPLRRVQPGVPRPILTPMQSREKAARRALAGLGYNECVTYSFIDKQASSLFGGGS 534 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +++ NPIS++MS++R LLPGLL+A RN R D A+FEV + P Q A Sbjct: 535 DAVKVDNPISSEMSHLRPDLLPGLLRAAARNQARGFMDMALFEVGPAFHGGEPGEQHLQA 594 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G+ G++ + R DL+DAKAD +V+ + ++ W+ Sbjct: 595 CGLLVGAN--------VTRNPHGARRPSDLYDAKADVEAVLAAIGAPPRVQITRKVADWW 646 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGRSG+I VL FGE HP +L + P+ F + + ++P+ K +T T+ + Sbjct: 647 HPGRSGVIGLGPN-VLATFGELHPRVLQALDVKGPVVAFTLLIGNVPLP-KVKTPTRPAL 704 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG----KSLGEGKK 763 ++ L V+RD AF+VD+ + A TLVN D+ LI V VFD F G +G GKK Sbjct: 705 AINDLQAVERDFAFVVDKGVEALTLVNAAIGADKVLIGAVQVFDQFTGDKAEAQMGAGKK 764 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+AI V +QP + T + +I + RIVE V K T LR Sbjct: 765 SLAISVRLQPQEKTLTEAEIEAVSARIVEKVCKATGGALRG 805 >gi|149202931|ref|ZP_01879902.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius sp. TM1035] gi|149143477|gb|EDM31513.1| phenylalanyl-tRNA synthetase beta subunit [Roseovarius sp. TM1035] Length = 799 Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust. Identities = 335/818 (40%), Positives = 468/818 (57%), Gaps = 33/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T S+ +I +TLT +GLEVE + + A L FTI KVL E +PD D Sbjct: 1 MKFTLSWLKEHLETTASVTEIAETLTDLGLEVEGITDPAARLRDFTIGKVLKAEPHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D E Q++CGAPN R G+ V A PG +P + + V KIRGIES Sbjct: 61 RLRVCQVATADG----ETQIICGAPNAREGITVVIAKPGVYVPGIDTTIGVGKIRGIESH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LS++ I+ELP VG R +D+L DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSEEHDGIIELP-SGEVGQRFTDWLAAHDPAKVDPVIEIAITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNV 229 VRGIALDL A G+GK+K + P+ + D D ++ C+ FA ++GV+N Sbjct: 176 VRGIALDLAARGMGKMKPAQTVDIEGQFACPIGVTIDADTATGGCEVFAGRLIRGVKNGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++QRL+A+GLR ISALVDITN+ + DR P HVFDA ++ L + R GE ++ Sbjct: 236 SPEWLQQRLRAIGLRPISALVDITNFFTYDRNRPLHVFDADKVKGDLRIHRTTGGETLIG 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +EY VVI+ + I+SI GI+GG GC D T +V +E A+WD + IA +G+ Sbjct: 296 LDEKEYTFGLGQVVISDESGIESIGGIMGGLATGCTDETVNVFLEAAVWDTVQIATTGRA 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYR ERG+D + L +IL LCGG S+ +A + R + Sbjct: 356 LRINSDARYRNERGIDPAFNMEALDLATQMILDLCGGAPSNRVVAGKVPDVSRAYRLDPA 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V+ L G+++P + + L LGF + G VPSWR D+ +ADLVEE+ RI + Sbjct: 416 RVQSLVGMEIPESEQRQSLTALGFKLEGNM----AYVPSWRPDILGEADLVEEVARIASL 471 Query: 470 DQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 +++ + L V K LS Q R + +R A+ E V +SFI + LFGGG Sbjct: 472 TKLQGRSMARALPGVP-KPILSPMQKREQIARRTCAALGYNECVTYSFIDHAAATLFGGG 530 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + NPISAD+S+MR LLPGLL+A RN R I D A+FEV H + P Q Sbjct: 531 DDATMLANPISADLSHMRPDLLPGLLRAAARNQARGIMDLALFEVGHAFHGGEPGEQHLQ 590 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G SG + R VD+FDAKAD +++ + ++ P+W Sbjct: 591 VAGLLVGRSG--------PKEVHGAARAVDVFDAKADVEAILAAIGAPAKVQILRDGPAW 642 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR G I + VLG FGE HP IL + P F +Y IP+ +K + ++ Sbjct: 643 FHPGRHGRICLGPKKVLGIFGEVHPRILQALDVKGPAVAFTLYPAEIPLP-RKTSASRGA 701 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 + +S L V+RD AF+VD A TL+N D+ LI+DV VFD F G +LGEGKKS+A Sbjct: 702 LDISDLQAVERDFAFVVDVQTEALTLINAAAGADKALIEDVRVFDAFSGGNLGEGKKSLA 761 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V +QP T + +I + +I+E V K T VLR Sbjct: 762 LTVRLQPRDKTLTEAEIEAVSGKIIEKVTKATGGVLRG 799 >gi|297717860|gb|ADI50073.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Odyssella thessalonicensis L13] Length = 790 Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust. Identities = 331/813 (40%), Positives = 482/813 (59%), Gaps = 33/813 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT SL +ICD L ++GLEVE ++N E L F + V+ E++P+ D Sbjct: 1 MKFTLSWLKDHLDTSASLNEICDKLVNLGLEVENIENPAEKLKGFVVAHVVKREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ID G Q++QVVCGAPNVR GL +A G+ IP + IR +ES GM+ Sbjct: 61 RLSLCVIDDGSGQQLQVVCGAPNVRQGLKIAFAREGTVIPITGQALKKGVIRDVESQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +ELM+ ++ IMEL G L+ L+L DP+I++S+TPNR+DC GVRGIA DL Sbjct: 121 CSARELMIGENHDGIMELDSALVPGQDLATALKLDDPVIELSITPNRADCFGVRGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK ++ + + P+ + + D +C F ++ V+N AP++++ RL Sbjct: 181 AAAGLGTLKTLDYRPFVGTFDSPITVAIEASD--ICPEFKGVYIRNVKNGTAPDFIKHRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +AVG I+ALVDITNY+++D G P HVFDA ++ +LTV A GE AL+ + Y L Sbjct: 239 EAVGQNIINALVDITNYIAIDLGRPLHVFDAQKLPALLTVGEAQGGEAFEALNGKPYSLP 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 I ++ + S+ GI+GG G TTDVL+E A WDPI A +G+ L +++++R Sbjct: 299 AGAAKITANDEVISLGGIMGGSTTGATLETTDVLLECAHWDPIKTALAGQKLQLLSEART 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK------IVFMNSEVK 412 RFERGVD + + V LIL CGG S + A + P I ++++ Sbjct: 359 RFERGVDPHSVDLGINAGVQLILQCCGGQPSHVVTATHKNVAPANYTLKAPITLTHAKLT 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+ + +E++ IL RLGF V+ + V+ PS+R D+E ADLVEEILRI G D + Sbjct: 419 SLGGLSISLEEAGDILSRLGFEVVTASTELTVTPPSFRFDIEGPADLVEEILRIAGYDNV 478 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 LP +++ K + V+++LASR + E WSF+S+ ++ LFGG L Sbjct: 479 PPVSLPQIKIQPKL-----PRKAEVVRQLLASRGLQECYTWSFLSEAKAQLFGGQAPHLS 533 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS ++ MR S+LP L+ A RN +R + + +E++ Y +G++ MA+G+R Sbjct: 534 VENPISVELKVMRPSILPNLIDAAVRNHNRGLENCRFYEIAAQYSG---KGEQLMASGLR 590 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPG 651 + L + R V++FDAKADAL+V+ +S S + E G PS+YHPG Sbjct: 591 --------THHLHERDWQSSPRSVNVFDAKADALAVLAATGLSATSYQVEQGGPSYYHPG 642 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R G I+ VLGYFGE HP IL P+ GFEV+L+ +P + K+T + + S Sbjct: 643 RCGTIRQGNR-VLGYFGEVHPRILKALEADFPVVGFEVFLEMLPEIKLKKT----MANFS 697 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 +L PV RD AF++DQ PA LV I+ VD+ LI V +FDV+ G ++ GKKS+AI+V Sbjct: 698 NLQPVTRDFAFVIDQETPAEKLVTAIQKVDKILIKSVNIFDVYAGANIEAGKKSIAIEVR 757 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++P K T D +I L D+I+ +V K +R Sbjct: 758 LEPTKATLTDAEIHELSDKIIAHVGKTVGGKIR 790 >gi|258542129|ref|YP_003187562.1| phenylalanyl-tRNA synthetase subunit beta [Acetobacter pasteurianus IFO 3283-01] gi|256633207|dbj|BAH99182.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01] gi|256636266|dbj|BAI02235.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-03] gi|256639319|dbj|BAI05281.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-07] gi|256642375|dbj|BAI08330.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-22] gi|256645430|dbj|BAI11378.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-26] gi|256648483|dbj|BAI14424.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-32] gi|256651536|dbj|BAI17470.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654527|dbj|BAI20454.1| phenylalanyl-tRNA synthetase beta subunit [Acetobacter pasteurianus IFO 3283-12] Length = 819 Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust. Identities = 334/843 (39%), Positives = 496/843 (58%), Gaps = 64/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWL DHLDT +LE+IC L IGLEVE V+NR A+ PF ++L + +P+ D Sbjct: 1 MKFTLSWLYDHLDTQATLEEICAKLNQIGLEVESVENRGAAIEPFLTARILDAQPHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+D G Q++QVVCGAPN R GL ++A PG+ +P ++ + KIRG S GM Sbjct: 61 RLQVCRVDAGPGFQDVQVVCGAPNARKGLAVIFAKPGTYVPGLDITIKEGKIRGEASGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L ++S I ELP D G +D+ L D +ID+++TPNR D +GVRGIA D Sbjct: 121 LCSLRELGLGEESNGIAELPEDTLPGQSYADFAGLDDVVIDIAITPNRGDALGVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKGVRNNVAP 231 L AAGLG L+ P +E++ E KFD + C ++GV+N +P Sbjct: 181 LAAAGLGTLR------PWLAETV--EGKFDSPVVWDISYPEACPWVLGRTIRGVKNGPSP 232 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++++L+++GLR ISALVDITNY D G P HVFDA++I+ LT+ R GE+ AL Sbjct: 233 EWLQRKLESIGLRPISALVDITNYFCFDLGRPLHVFDAAKIAGGKLTICRG-EGEQFRAL 291 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D Q+Y + P++ VIA +QS+AGI+GG+ G TTDV VE AL+DP+ IA S + + Sbjct: 292 DGQDYTVGPEDCVIADQAGVQSLAGIMGGEATGATAETTDVFVECALFDPVKIALSARRV 351 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ +DS YRFERGVD + L+ LI+ LCGG AS++ A R + Sbjct: 352 GVSSDSSYRFERGVDPALPVSALEAATHLIIELCGGEASEVVSAGEQPAWQRDATLRFAR 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEK------------- 456 V+ L G+DVP ++S+ +LE+LGF V D + +SVPSWR D+ +K Sbjct: 412 VRDLGGLDVPADESVDLLEKLGFEVQERTDTQVRMSVPSWRNDIAQKPVLAQGEGIPADV 471 Query: 457 --------------ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 +DLVEE+LR+ G+D + + PLP V + L+ +Q+R +R L Sbjct: 472 AAKAAEGVAAIESESDLVEEVLRLKGLDAVPAVPLPSVVVVPEAALTPRQARLALARRFL 531 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 A+R + E V +SF+S E + FGG L +LNPI++D+ MR + + LL A N R Sbjct: 532 AARGLTETVGFSFVSHEVAERFGGAPESLRLLNPIASDLDQMRPTPMINLLAAVKHNSAR 591 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 D +FEV + + GQ+ + AG+R G + + + V L+ AK Sbjct: 592 GWGDLGLFEVGPAFAEN---GQQPVVAGVRSGHT---------PRYPGQAGQPVSLWAAK 639 Query: 623 ADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 ADAL +++ V+ D++ + AP WYHPGRSG+++ + VL YFGE HP++L G+ Sbjct: 640 ADALELLQQLGVNPDAISTTTDAPGWYHPGRSGVLRQGPKNVLAYFGELHPSLLQAEGID 699 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 P+ GFE+ D++P ++K+ K LS+ PV+RD AF+V + +P L+ ++ + Sbjct: 700 VPVVGFELMPDTVPDPKRKK---KAAPRLSAFQPVRRDFAFVVARDVPGEKLLRAVRGAE 756 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 R L+ DV++FDV++G + EG +S+ ++V +QP+ + D ++ + D+IV V K T A Sbjct: 757 RQLVADVSLFDVYEGPHVPEGHRSIGVEVTLQPMDKSLTDAELEAVSDKIVAAVTKATGA 816 Query: 801 VLR 803 LR Sbjct: 817 TLR 819 >gi|83594853|ref|YP_428605.1| phenylalanyl-tRNA synthetase subunit beta [Rhodospirillum rubrum ATCC 11170] gi|91208134|sp|Q2RNH7|SYFB_RHORT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83577767|gb|ABC24318.1| phenylalanyl-tRNA synthetase beta subunit [Rhodospirillum rubrum ATCC 11170] Length = 800 Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust. Identities = 340/812 (41%), Positives = 473/812 (58%), Gaps = 20/812 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFT+ WLKDHLDT S+ I + LT++GLEV+ + D AL+PF + V+ +PD D Sbjct: 1 MKFTIGWLKDHLDTQASVADIAEKLTALGLEVDAIEDPTAALAPFVVGHVIEAGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D+G +Q+VCGAPN R GL A PG+ IP ++ KIRGIES GMM Sbjct: 61 RLKLCRVDSGT-DILQIVCGAPNARTGLKVALALPGAVIPATGDVLKKGKIRGIESQGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I+ELP D PVG L D L L DP+ID+++TPNR+D +GVRGIA DL Sbjct: 120 CSTRELGLGEDHDGIIELPADTPVGVPLVDVLAL-DPVIDIAITPNRADALGVRGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDD--SSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A GLG + ++ P+ + D + S C + +GVRN +P W++ Sbjct: 179 AAGGLGGVIADTLTAIPGRFPSPIGVAIDPETLASGACSHYVGRYFRGVRNGESPAWLKD 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEY 295 RL A+G+R IS LVDITNYV+ DR P HVFDA +++ +T R A GE + ALD + Y Sbjct: 239 RLNAIGVRPISLLVDITNYVTFDRARPLHVFDADKLTGTTITARPARQGEILRALDGRSY 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L V IA Q + GI+GG+ G D+NT +V +E AL+DP N A +G+ LGI +D Sbjct: 299 TLDAPVVAIADGAGPQGLGGIMGGEDTGVDENTVNVFLESALFDPANTAAAGRFLGIDSD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +RYRFERGVD + + + +IL LCGG AS++ IA R I + V RL Sbjct: 359 ARYRFERGVDPESCLLGAELATRMILDLCGGEASELVIAGAPPVWRRTIALRPARVARLG 418 Query: 416 GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ V + + L LG +V + + V PSWR D+ + DL+EE++R++G D + + Sbjct: 419 GVAVERAEMVAKLRALGCTVEDDGAEALRVDPPSWRVDIGAEHDLIEEVVRLHGFDLVPA 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PLP + K L+ Q R VKR LA+R M+E V WSF+ + + FGGGQ L + Sbjct: 479 VPLPRDPMP-KAVLTPGQRRMITVKRTLATRGMLEAVTWSFLPRAVAKGFGGGQDALVLA 537 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPIS+D+ MR S+LP L+ A GRN R D +FEV + P Q +AAG+R G Sbjct: 538 NPISSDLDAMRPSILPNLIAAAGRNAARGYGDLGLFEVGPRFHGGEPGQQTLVAAGLRAG 597 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRS 653 + R WS + R DL+D KAD L+ IE SL+ + AP+W+HPGRS Sbjct: 598 KI----APRHWSRPA----RDADLYDIKADVLAAIEAAGAPTASLQVSADAPAWFHPGRS 649 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G I+ VL FGE HP L + P+ GFE+ LD++P+ + + +KT+ + LS Sbjct: 650 GQIRLG-RTVLAAFGEIHPAALALLDVKGPMVGFELDLDALPLPKGRPSKTRPPLTLSPF 708 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PV RD AF+V+ + ++ + D+ LI DV +FDV+QG L G+KS+A+ V +Q Sbjct: 709 QPVARDFAFVVEAGVAGDAVIKAARGADKALITDVVIFDVYQGDRLEAGRKSLALSVTLQ 768 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P T D++I + RIV V K T LRS Sbjct: 769 PTDHTLSDEEIEAVSARIVGAVTKLTGGSLRS 800 >gi|84684094|ref|ZP_01011996.1| phenylalanyl-tRNA synthetase beta subunit [Maritimibacter alkaliphilus HTCC2654] gi|84667847|gb|EAQ14315.1| phenylalanyl-tRNA synthetase beta subunit [Rhodobacterales bacterium HTCC2654] Length = 808 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 338/821 (41%), Positives = 479/821 (58%), Gaps = 37/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT S+++I +TLT +GLE+E+V N + L FT+ KV E++PD D Sbjct: 8 MKFTLSWLKDHLDTTASVDEIAETLTDLGLEIEEVINPADRLGVFTLAKVKHAEQHPDAD 67 Query: 60 CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 LR+ T + E Q+VCGAPN R G+ V A PG +P ++ ++V KIRG+ES GM Sbjct: 68 R--LRVCTVETDEGDKQIVCGAPNARAGITVVLAKPGDYVPGIDVTLSVGKIRGVESHGM 125 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVR 172 M SE+EL LSD+ I+ELP VG + D+L +DP + D+++TPNR D +GVR Sbjct: 126 MASERELELSDEHDGIIELP-SGEVGQKFVDWLAENDPSKVDPVFDIAITPNRPDALGVR 184 Query: 173 GIALDLVAAGLGKLK---EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A DL A GLG LK E N+ S I + I D C F +KGV+N Sbjct: 185 GVARDLAARGLGTLKPAPEANVKGTFKS-PINVTIDGDTQGDDGCYIFQGRLIKGVKNGP 243 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+++RLKA+GLR ISALVD+TN+ + D+ P HVFDA ++ L + + GE++LA Sbjct: 244 SPAWLQKRLKAIGLRPISALVDVTNFFTYDQNRPLHVFDADKVQGDLRIHKTTGGEQLLA 303 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + Y P VVI+ D ++S+AGI+GG+ +GC ++T +V +E A+W+PI IAR+G+ Sbjct: 304 LDEKTYTFEPGMVVISDDRGVESVAGIMGGEESGCTEDTVNVFLEAAVWEPIQIARTGRA 363 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYR ERG+D ++ +IL LCGG AS++ A + R Sbjct: 364 LKINSDARYRNERGIDPAFNPLAIELATQMILDLCGGEASEVVTAGEVPNTDRAYKLDTD 423 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 L G+D+P E LE LGF + G+ VPSWR DV +ADLVEE+ RI + Sbjct: 424 RCSSLVGMDIPAETQRASLEALGFVMEGDM----AHVPSWRPDVLGEADLVEEVARIASL 479 Query: 470 DQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++ +P+ K L+ Q R +R A+ E V +SFI + LF GG+ Sbjct: 480 TKLVGKPMSRASTGVPKPVLTPMQVRENTGRRTAAALGYNECVTYSFIDAASAALFAGGE 539 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 ++ NPIS++MS+MR LLPGLL+A RN R D A+FEV ++ PE Q+ Sbjct: 540 DATKLDNPISSEMSHMRPDLLPGLLQAAARNQARGFMDLALFEVGAIWHGGEPEEQRLAI 599 Query: 589 AGIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +GI G++G + G+ R + D++DAKADA +++ + ++ GA Sbjct: 600 SGILVGATGPKDVHGAARGF-----------DIYDAKADAEAILAAMGAPAKVQILRGAE 648 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 W+HPGR G I + VLG FGE HP +L + P F +Y + IP+ +K T+ Sbjct: 649 GWWHPGRHGKICLGPKKVLGVFGELHPKVLAEMDVKGPAVAFTLYPEEIPLP-RKSNATR 707 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE-GKK 763 + +S L PV+RD AF+VD + A TLVN D+ LI+DV VFD F G LGE G+K Sbjct: 708 PALTISDLQPVERDFAFVVDADVEALTLVNAAAGADKALIEDVRVFDQFTGGKLGEAGQK 767 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+AI V +QP T + +I + +IVE V K T LR Sbjct: 768 SIAITVRMQPTDATLTEKEIEAVAAKIVEKVGKATGGTLRG 808 >gi|56698312|ref|YP_168685.1| phenylalanyl-tRNA synthetase subunit beta [Ruegeria pomeroyi DSS-3] gi|66773845|sp|Q5LMS3|SYFB_SILPO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56680049|gb|AAV96715.1| phenylalanyl-tRNA synthetase, beta subunit [Ruegeria pomeroyi DSS-3] Length = 798 Score = 594 bits (1531), Expect = e-167, Method: Compositional matrix adjust. Identities = 342/815 (41%), Positives = 471/815 (57%), Gaps = 28/815 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT S+++I + LT +GLEVE ++N A L+ FT+ V S ++PD D Sbjct: 1 MKFTLSWLKDHLDTTASVDEIAEALTDLGLEVEGIENPAARLAGFTLAHVKSASQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + + E Q+VCGAPN R G+ V A PG +P ++ ++V IRG+ES GMMC Sbjct: 61 RLRVCVVETNEGEKQIVCGAPNAREGITVVLAKPGDYVPGIDVTLSVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRGI 174 SE+EL LSD+ I+ELP VG R D+L +DP +I++++TPNR D +GV GI Sbjct: 121 SERELELSDEHDGIIELP-SGEVGERFIDWLAENDPAKVDPVIEIAITPNRPDALGVAGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A DL A G+G LK + P+++ D D C F ++ VRN +P W+ Sbjct: 180 ARDLAARGIGTLKTRAYAPVPGDFDCPIKVTIDEDTRDGCPLFTGRLIRDVRNGPSPQWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 + +L+A+GLR ISALVDITNY++ D P HVFDA ++ L V RA GE + ALD +E Sbjct: 240 QDQLRAIGLRPISALVDITNYMTYDHNRPLHVFDADKVKGNLRVHRAAGGETLKALDEKE 299 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y P +VI+ D +SIAGI+GG GC + T +V +E A WD + IA +G+ L I + Sbjct: 300 YTFQPGMMVISDDEGAESIAGIMGGDATGCTEETVNVFLESAYWDNVQIALAGRALKINS 359 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+RYRFERGVD + L+H +IL +CGG AS + IA + R V+ L Sbjct: 360 DARYRFERGVDPAYTLEGLEHATQMILDICGGEASTVVIAGAVPDHSRAYKLDAERVRSL 419 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P + + L RLGF + G VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 420 VGMDIPESEQRQTLTRLGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKLVG 475 Query: 475 EPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 PLP LT K ++ QQ R +R AS E V+++FI + + LFGGG + Sbjct: 476 RPLPRLTDGVPKPVMTPQQRRLSMARRTAASLGYNECVSYTFIDQASAALFGGGTDATML 535 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI-- 591 NPIS++MS+MR LLPGLL A RN R AD A+FE V+ P Q+ AG+ Sbjct: 536 ENPISSEMSHMRPDLLPGLLAAAARNQARGFADLALFEAGPVFHGGEPGEQRAQIAGLLV 595 Query: 592 -RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 R G + G+ R VDL+DAKADA +V+ + ++ W+HP Sbjct: 596 GRTGPKDVHGA-----------ARAVDLYDAKADAEAVLAAMGAPAKVQILRDGDGWWHP 644 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GR G I + VLG FGE HP +L + P F ++ + +P+ +K T T+ + L Sbjct: 645 GRHGRICLGPKKVLGVFGELHPRVLQAMDVKGPAVAFVLWPEEVPLPRKSGT-TRAALAL 703 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 L V+RD AF+VD + A TLVN D+ LI+DV VFD F G SLGEGKKS+AI V Sbjct: 704 RDLQAVERDFAFVVDAGVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAITV 763 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP + T ++ DI + +IVE V K T LR Sbjct: 764 RLQPTETTLKEKDIEAVSAKIVEKVAKATGGTLRG 798 >gi|260425659|ref|ZP_05779639.1| phenylalanyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] gi|260423599|gb|EEX16849.1| phenylalanyl-tRNA synthetase, beta subunit [Citreicella sp. SE45] Length = 798 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 334/822 (40%), Positives = 476/822 (57%), Gaps = 42/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT S+++I + LT +GLEVE V+N + LS FTI KVL +++PD D Sbjct: 1 MKFTLSWLKEHLDTQASVDEITEALTDLGLEVEGVENPADRLSAFTIGKVLKAKKHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C ++ D G E Q++CGAPN R G+ V A PG+ +P + + V KIRGIES Sbjct: 61 KLRVCTVM-TDEG---ESQIICGAPNAREGITVVVAKPGTYVPGIDTTIQVGKIRGIESF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LS++ I+EL VG R D+L +DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSEEHDGIIEL-ASGEVGQRFVDWLAENDPAKVDPVIEIAITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSL--CKGFAMCCVKGVRN 227 V GIA DL A GLG LK + ++ P + P + ++DS+ C F ++GV+N Sbjct: 176 VHGIARDLAARGLGTLKPLAEVTVP---GAFPCPVSVTIEDSAKEGCPVFYGRLIRGVKN 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P W++ RLKA+GLR IS LVD+TN+ + DR P HVFDA +++ L V A GE + Sbjct: 233 GPSPAWLQSRLKAIGLRPISFLVDVTNFFTFDRNRPLHVFDADKMTGGLRVHAAAGGETL 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD + Y L P ++I+ D +S+ G++GG+ G D T +V +E A +D I A +G Sbjct: 293 EALDERTYTLEPGMILISDDTGPESLGGVMGGEPTGVSDETVNVFLEAAYFDTIRTAYTG 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L I +D+RYRFERG+D P ++ +IL + GG AS++ +A + R Sbjct: 353 RGLKINSDARYRFERGIDPASAAPGIEAATRMILDIAGGEASEVVVAGAVPDVSRAYRLD 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V L G+++P + LE LGF++ G+ VPSWR DV +ADLVEE+ R+ Sbjct: 413 TDRVISLVGMEIPAAEQRATLEALGFTLDGDM----AQVPSWRPDVMGEADLVEEVARVA 468 Query: 468 GVDQIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++K +P+P Q LS Q R + +R +A E V +SF+ K + LFGG Sbjct: 469 SLTKLKGQPMPRPQAGVPAPILSPMQKREQVARRTVAELGYNECVTYSFVDKLAAELFGG 528 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G + NPIS+++S+MR LLPGLL+A RN R AD A+FEV +E P Q Sbjct: 529 GSDATMLANPISSELSHMRPQLLPGLLRAAARNQARGFADLALFEVGAAFEGGEPGEQHT 588 Query: 587 MAAGI---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 G+ R G + G R VDL+DAKADA +V+ + ++ G Sbjct: 589 QVTGLLVGRTGPKDVHGG-----------SRPVDLYDAKADAEAVLSAMGAPARMQILRG 637 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A W+HPGR G + + VLG FGE HP +L G+ P GF +Y IP+ + K + Sbjct: 638 AEEWWHPGRHGKLCLGPKKVLGVFGEIHPKVLSELGVKGPAVGFTLYPAEIPLPRSKGSS 697 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGK 762 ++ L+ L V+RD AF+VD + A LVN D+ LI++V VFD F G SLGEGK Sbjct: 698 RPALI-LNDLQAVERDFAFVVDADVAALDLVNAAAGADKALIEEVRVFDEFIGGSLGEGK 756 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KS+AI V +QP +T ++ DI + +IVE V K T LR Sbjct: 757 KSLAITVRLQPSGETLKEKDIEAVAAKIVEKVSKATGGTLRG 798 >gi|159042793|ref|YP_001531587.1| phenylalanyl-tRNA synthetase subunit beta [Dinoroseobacter shibae DFL 12] gi|157910553|gb|ABV91986.1| phenylalanyl-tRNA synthetase, beta subunit [Dinoroseobacter shibae DFL 12] Length = 798 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 328/813 (40%), Positives = 471/813 (57%), Gaps = 24/813 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD +L++I LT +GLEVE V+N A LS F + KVL E++P+ D Sbjct: 1 MKFTLSWLKDHLETDATLDEILYALTDLGLEVEGVENPAAKLSDFVVGKVLRAEKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G +Q++CGAPN R G+ V A PG +P + + V KIRGIES GMM Sbjct: 61 RLKVCQVEYGDGP-VQIICGAPNAREGITVVVARPGVYVPGIDTTIGVGKIRGIESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL +SD+ I+ELP + +G D+L + DP +I++++TPNR D +GVRG Sbjct: 120 ASERELEMSDEHTGIIELP-EGEIGQSFPDWLAVYDPARVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG +K +++ + P+ + D D F ++GV+N +P+W Sbjct: 179 IARDLAARGLGTMKARDVAPVPGAFPCPITVTIDDDTRDAAPVFYGRLIRGVKNGPSPDW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ L+A+GLR IS LVDITN+ + DR P HVFDA +++ L V A GE LD + Sbjct: 239 LQTALRAIGLRPISTLVDITNFFTYDRNRPLHVFDADKVAGCLRVHAAKGGETFTGLDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY L+P I+ D ++S+AGI+GG H+GC + T +V VE A +DP+ A +G+ L I Sbjct: 299 EYVLAPGMTAISDDNGVESLAGIMGGLHSGCTEETVNVFVEAAYFDPVRTAYTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERG+D ++H +IL LCGG ASD+ +A + R V+ Sbjct: 359 SDARYRFERGIDPAWTPEGMEHATRMILDLCGGEASDVVVAGALPDVARAYKLDTDRVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+ E LE LGF++ G+ VPSWR DV +ADLVEE+ RI + +++ Sbjct: 419 LVGMDIAPETQRATLEALGFTLEGDM----AHVPSWRPDVMGEADLVEEVARIASLTKLQ 474 Query: 474 SEPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 PLP + + Q Q R +R A+ E V +SFI + + LFGGG E Sbjct: 475 GRPLPRASTGVPKPVVTQGQRRQALARRTAAALGYNECVTYSFIDQPTAALFGGGTEATE 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS++MS+MR +LLPGL++A RN R I D A+FEV + P Q + +G+ Sbjct: 535 LENPISSEMSHMRPALLPGLMQAASRNQARGIMDLALFEVGPAFHGGEPGEQHTLISGLL 594 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G +G R VD+FD KADA +++ + ++ GA W+HPGR Sbjct: 595 VGRTG--------PKDVRGESRPVDVFDVKADAEAILAAIGAPAKVQILRGAQGWWHPGR 646 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 G I + VLG FGE HP ++ L P+ GF ++ D +P+ +K + T+ + Sbjct: 647 HGKICLGPKKVLGVFGELHPRVVAAMDLKGPVMGFTLWPDEVPMP-RKTSATRPALEARD 705 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 L V+RD AF+VD + A L N D+ LI++V VFD F G +LGEGKKS+AI V + Sbjct: 706 LQAVERDFAFVVDAQVEALALTNAAAGADKTLIEEVRVFDEFIGGALGEGKKSLAITVRL 765 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 QP T + +I + RIV V K T VLR Sbjct: 766 QPTDATLTEKEIEAVAARIVAKVEKATGGVLRG 798 >gi|84500408|ref|ZP_00998657.1| phenylalanyl-tRNA synthetase, beta subunit [Oceanicola batsensis HTCC2597] gi|84391361|gb|EAQ03693.1| phenylalanyl-tRNA synthetase, beta subunit [Oceanicola batsensis HTCC2597] Length = 799 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 331/817 (40%), Positives = 477/817 (58%), Gaps = 31/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T SL++I +TLT +GLEVE + D AL FTI KV S E++PD D Sbjct: 1 MKFTLSWLKDHLETSASLDEIAETLTDLGLEVEGIEDPAAALKGFTIAKVNSAEQHPDAD 60 Query: 60 ---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 +++ D G E Q+VCGAPN R G+ V A PG IP ++ ++V KIRG+ES G Sbjct: 61 KLRVCMVQTDEG---EKQIVCGAPNAREGITVVLAKPGMYIPGLDITISVGKIRGVESHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGV 171 MM SE+E+ LS++ I+ELP +G + +LE++ DP+I++++TPNR D +GV Sbjct: 118 MMASEREMGLSEEHEGIIELP-SGEIGEEFAHWLEVNRPEAVDPVIEIAITPNRPDALGV 176 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL--CKGFAMCCVKGVRNNV 229 RGIA DL A GLG LK + L P ++ D+++S+ C FA ++GV+N Sbjct: 177 RGIARDLAARGLGSLKPLPEPT-LDVNGGPCPVELDIEESARDGCHVFAGRLIRGVKNGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ RL+++GLR ISALVD+TN + D P HVFDA ++ L V RA GE Sbjct: 236 SPEWLQARLRSIGLRPISALVDVTNLFTHDLNRPLHVFDADKVRGRLRVHRAEGGEAFTG 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD ++Y + +VI+ D ++SI GI+GG GC T DV VE A+WD ++IA +G+ Sbjct: 296 LDEKDYVVPAGALVISDDNGVESIGGIMGGLATGCVPETVDVFVEAAVWDHVSIAHAGRA 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYR ERG+D + L +LI LCGG ++ +A + R Sbjct: 356 LKINSDARYRNERGIDPAFNMEGLDRACALIAELCGGEVTEAVVAGEVPDVSRAYRLNTE 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 L G+++P ED LERLGF + G+ VPSWR DV +ADLVEE+ RI + Sbjct: 416 RCSSLVGMEIPAEDQRATLERLGFVMEGDM----AHVPSWRPDVLGEADLVEEVARIASL 471 Query: 470 DQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +++++PL + + L++ Q R + V+R A+ E V +SFI +E LFGGG Sbjct: 472 TRLEAKPLARVRAGVPEPILTVNQRREQMVRRTAAALGYNECVTYSFIDRESGRLFGGGT 531 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 ++ NPIS +MS+MR SLLPGLL+A RN R +AD A+FE+ + P Q Sbjct: 532 EATQVANPISQEMSHMRPSLLPGLLQAAARNQARGMADMALFEIGATWTGGEPGDQIEAV 591 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AGI G +G R VDL+DAKAD +++ + ++ + +++ Sbjct: 592 AGILVGRTG--------PKDVHGVSRPVDLYDAKADIEALLAAIGAPAKVQIQRSGGAFW 643 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G+I + VLG FGE HP +L + P+ GF ++ +P + ++ V Sbjct: 644 HPGRHGVICLGPKKVLGAFGELHPGVLQAMDVKGPVTGFVLWPAEVP-QPRNAGGSRGAV 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 + L PV+RD AF+VD + A LVN D+ +I DV VFD F G SLGEGKKS+A+ Sbjct: 703 EMRDLQPVERDFAFVVDAQVEALALVNAAAGADKAMISDVRVFDEFIGGSLGEGKKSIAL 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V IQP + T ++ +I + ++V+ V K T VLR Sbjct: 763 TVTIQPQEKTLKEAEIEGIAAKVVDKVAKATGGVLRG 799 >gi|332186997|ref|ZP_08388738.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] gi|332013007|gb|EGI55071.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingomonas sp. S17] Length = 787 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 333/809 (41%), Positives = 477/809 (58%), Gaps = 27/809 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD L+ I + LT IGLEVE V N EAL PF + ++LS ER+P D Sbjct: 1 MKFTLSWLKSHLDTDADLDTIVEGLTRIGLEVEGVHNPGEALEPFRVARILSAERHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G + +QVVCGAPN R GL+GV+ PG+ +P ++ + V IRGIES GMM Sbjct: 61 KLQVLSVDAG-NGPMQVVCGAPNARAGLVGVFGAPGAYVPGLDVTLKVAAIRGIESNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL + + I+ELP DA VG DY L+DP+IDVS+TPNR DC+GV GIA DL Sbjct: 120 CSARELQIGEGHDGIIELPEDAVVGTSFPDYAGLNDPVIDVSITPNRQDCMGVHGIARDL 179 Query: 179 VAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG L I + P ++ E +++ ++D+ C F V G+ N AP WMRQR Sbjct: 180 AAAGLGTL--IAPTVPEVAGEGPGPDVR--IEDAEGCPAFYAQEVSGLTNGDAPEWMRQR 235 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+G + ISALVDITNY+++D G P HV+D +++S L R A GE + AL+ + Y L Sbjct: 236 LTAIGQKPISALVDITNYMTVDLGRPLHVYDKAKLSGGLVARHAKDGETVEALNGKTYTL 295 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S VIA D + I GI+GG+H+G + TTDV++E A + P IAR+G+ LG+ +D+R Sbjct: 296 SEGMTVIADDVAVHDIGGIMGGEHSGVSETTTDVIIECAYFAPEAIARTGQKLGLTSDAR 355 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERGVD + L L+ +CGG AS + A + I + + L G+ Sbjct: 356 QRFERGVDPAFLDDGLAIATFLVQHICGGKASSVTRAGEPPVVAKTIAYDPKLAETLGGL 415 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V ILE LGF+V ++ +V+ PSWR+DV+ ADLVEE++RI G+D + L Sbjct: 416 AVEPARQKAILESLGFTVTADW---QVTAPSWRRDVDGPADLVEEVIRIEGIDHVPPVAL 472 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + + QQ R +R A+R + E V WSFIS+ Q+ FGGG + NPI Sbjct: 473 PRAPGVARPTATPQQKLERRARRAAAARGLDEAVTWSFISEAQAAPFGGGA--FTLANPI 530 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S D+ MR SLLPGLL AT RN+ R +FE+ G++Y+A R Sbjct: 531 SEDLKVMRPSLLPGLLAATERNIKRGATSVRLFEI----------GRRYLAEAERPTLGV 580 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYHPGRSGII 656 + + + + + D +DAKA+A++++ + +D+L+ A +HPG+SG + Sbjct: 581 VLAGDKTPRNWRSGKAQGFDAYDAKAEAIALLAQAGAPVDNLQVMGEAGDAWHPGQSGTL 640 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + VL FG HP++L F L + E+YLD+IP ++ + +L V Sbjct: 641 RLGPKTVLAAFGMVHPSVLKAFDLDGAVAAVELYLDAIP-PKRATGFMRPAYSPPALQSV 699 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 KRD AF+V +PA +L+ ++ D+ I VFDVF G+ + EG KSVA++VL+QP + Sbjct: 700 KRDFAFLVPAELPADSLIRAVRGADKAAITAARVFDVFAGQGVPEGHKSVAVEVLLQPSQ 759 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +F D++++ + D+IV K+ A LR Sbjct: 760 KSFTDEELKAIADKIVAAAAKQ-GAQLRG 787 >gi|119384994|ref|YP_916050.1| phenylalanyl-tRNA synthetase subunit beta [Paracoccus denitrificans PD1222] gi|119374761|gb|ABL70354.1| phenylalanyl-tRNA synthetase beta subunit [Paracoccus denitrificans PD1222] Length = 795 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 346/817 (42%), Positives = 485/817 (59%), Gaps = 35/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT SL +I + LT +GLEVE V + A L FT+ +VL E++PD D Sbjct: 1 MKFTLSWLKEHLDTQASLGEITEALTDLGLEVEGVTDPAAKLGTFTLARVLHAEQHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C +L D G E Q+VCGAPN R G+ V A PG +P ++ + V KIRG+ES Sbjct: 61 RLRVCRVL-TDEG---EKQIVCGAPNARAGITVVLAKPGDYVPGIDVTLGVGKIRGVESH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYL-----ELSDPIIDVSLTPNRSDCIG 170 GMM SE+EL LSD+ I+ELP VG + D+L E DP+I++ +TPNR D +G Sbjct: 117 GMMASERELELSDEHNGIIELP-SGEVGEKFVDWLAANRPEAVDPVIEIKITPNRPDALG 175 Query: 171 VRGIALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A DL A GLG+LK++ +++ P S S P+ + + + F+ ++GVRN Sbjct: 176 VHGVARDLAARGLGRLKQVEDVTVPGSFAS-PIGVTIAPEVAGKAPFFSGRLIRGVRNGP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P+W+++RL A+GLR I+ALVDITN + D P HVFDA ++ L VR + GE++LA Sbjct: 235 SPDWLQKRLTAIGLRPINALVDITNLFTFDLNRPLHVFDADKVKGNLIVRPSTEGEELLA 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + Y +P ++IA + +SIAGI+GG+H+GC D T +V +E A WDPI IA +G+ Sbjct: 295 LDGKAYAFAPGTMIIADEAGPESIAGIMGGEHSGCSDGTVNVFLESAYWDPIAIATAGRA 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYRFERGVD +P L+ +IL LCGG AS++ A + R + + Sbjct: 355 LKISSDARYRFERGVDPAFTLPGLELATQMILELCGGEASEVVTAGAVPDTSRSYLLEPA 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V L G+D+P + L LGF + G+ VPSWR DV+ ADLVEE+ R+ + Sbjct: 415 RVSSLVGMDIPEAEQRATLTALGFRLEGD----RAFVPSWRPDVQGSADLVEEVARVASL 470 Query: 470 DQIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +++ +PLP Q ++ L+ Q R + +R+ AS E V +SFI ++ +VLFGGG Sbjct: 471 TKLQGQPLPRPQAGVPQSVLTPLQRREQAARRMAASLGYNECVTYSFIDQKAAVLFGGGS 530 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + I NPIS++M++MR LLPGLL A RN R AD A+FE V+ P Q Sbjct: 531 DAVRIENPISSEMTHMRPDLLPGLLAAAARNQARGFADLALFECGPVFSGGEPGEQDLHL 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 +GI G++ D R R VD++DAKADA ++++ + + W+ Sbjct: 591 SGILVGANAAR-------DPYASR-RKVDIYDAKADAEAILQTIGAPAKAQINRKLDGWW 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR+G I L FGE HP +L FG+ GF V + ++P+ K RT ++ + Sbjct: 643 HPGRAGNIALGPN-ALATFGEIHPRVLRHFGIKGAAVGFTVRIAAVPLP-KVRTPSRPAL 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 LS L V+RD AF+VD + A TLVN D+ LI+ VTVFD F G L GKKS+AI Sbjct: 701 VLSDLQAVERDFAFVVDSGVEALTLVNAAVGADKALIERVTVFDQFTG--LEGGKKSIAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP + T D +I + RIVE V K T VLRS Sbjct: 759 TARLQPREKTLTDAEIEAVSARIVEKVSKATGGVLRS 795 >gi|254437420|ref|ZP_05050914.1| phenylalanyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] gi|198252866|gb|EDY77180.1| phenylalanyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 307] Length = 799 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 332/819 (40%), Positives = 473/819 (57%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD S+++IC+TLT +GLEVE V+N A LS F I KV E++PD D Sbjct: 1 MKFTLSWLKSHLETDASVDEICETLTDLGLEVEGVENPAAKLSDFIIGKVTHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G Q++CGAPN R G+ V A PG+ IP ++ ++V KIRGIES GMM Sbjct: 61 KLKVCTVDAGD-GPTQIICGAPNARAGITVVVAKPGTYIPGLDITISVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL +S++ I+ELP +G R SDYL DP +I++++TPNR D +GVRG Sbjct: 120 ASERELEMSEEHDGIIELPA-GEIGQRFSDYLAEHDPARVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--FAMCCVKGVRNNVAP 231 +A DL A GLG +K +I + P IK +DD +L + F +KGV+N +P Sbjct: 179 VARDLAARGLGTMKNNDIET--VPATFPNPIKVTIDDDTLAQAPVFFGRLIKGVKNGPSP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 +W++Q+L+A+GLR IS LVD+TN+ + D P HVFDA +IS L + RA E ++ L Sbjct: 237 DWLQQQLRAIGLRPISFLVDVTNWFTYDLNRPLHVFDADKISGSTLRLHRADGTETLMGL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+++Y L VI+ +SI G++GG GC +T +V VE A +DPI A +G+ L Sbjct: 297 DDKQYTLPEGATVISDSEGAESIGGVMGGLRTGCTADTVNVFVEAAYFDPIRTAYTGRAL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 I +D+RYRFERG+D L+H V +I+ GG ASD+ A I K R Sbjct: 357 KINSDARYRFERGIDPAFTPEGLEHAVRMIVDHAGGEASDVVQAGQIPDKSRAYKLDTDR 416 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L G+D+P + L LGF + G+ VPSWR DV+ ADLVEE+ RI + Sbjct: 417 CSSLVGMDIPADTQRATLTALGFVMDGDM----AGVPSWRPDVQGTADLVEEVARIASLT 472 Query: 471 QIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 +++ P+P + L+ Q R +R AS E V +SFI + + LFGGG Sbjct: 473 KLQGVPMPRVRAGVPAPVLTPMQKRLATARRTTASLGYNECVTYSFIDQAAAALFGGGTD 532 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + NPIS++MS+MR +LLPGLL+A RN R +++ A+FE + P Q + Sbjct: 533 ATMLANPISSEMSHMRPALLPGLLQAAARNQARGMSNLALFEAGDAFHGGEPGEQHTLVT 592 Query: 590 GIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 GI G +G + G+ R VD++DAKADA +++ + ++ GA Sbjct: 593 GILVGKTGPKDVHGA-----------SRDVDIYDAKADAEAILSAMGAPTKVQILRGAGD 641 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +HPGR G+I + +LG FGE HP IL G+ P+ GF +Y IP+ K + + Sbjct: 642 VWHPGRHGMICLGPKKILGVFGEIHPKILAALGVKGPVVGFVLYPSDIPMP-KNASVNRG 700 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 + L V+RD AF++D + A T VN D+ LI+DV +FD F G SLGEGKKS+ Sbjct: 701 AASIPDLQAVERDFAFVMDATVDALTAVNAAAGADKALIEDVRIFDEFIGGSLGEGKKSL 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ V +QP T +D DI ++ +I++ V K T LR Sbjct: 761 AMTVRLQPSGATLKDADIEVVSAKIIDKVAKATGGTLRG 799 >gi|197106439|ref|YP_002131816.1| phenylalanyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] gi|196479859|gb|ACG79387.1| phenylalanyl-tRNA synthetase, beta subunit [Phenylobacterium zucineum HLK1] Length = 807 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 337/826 (40%), Positives = 490/826 (59%), Gaps = 41/826 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+TD ++E++ + +T GLEVE V++ A L+ FT+ K++ ++P+ D Sbjct: 1 MKFTLSWLKEHLETDATVEQVVEAMTMAGLEVESVEDPAAKLAKFTVAKIVEAVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT K +++VCGAPN R GL ++AP G+ +P + + + R +RG+ S GM+ Sbjct: 61 KLRVCQVDT-KDGRLEIVCGAPNARAGLTTIYAPIGAYVPGSGITLEPRPVRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL ++++S I+ELP PVG ++ L + +ID +TPNR D +GVRGIA DL Sbjct: 120 CSAKELEVAEESDGIVELPEALPVGASAAEAFGL-EAVIDFEVTPNRPDWLGVRGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLGKLK + S P+EI+ D + C F ++GV+N +P W+++RL Sbjct: 179 AAAGLGKLKPETVPQVKGSFPCPVEIRVD---GTACPVFGGRLIRGVKNGPSPEWLQKRL 235 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFD-ASRISDVLTVR----------------RA 281 +VGLR I+ALVDITN+++ DR P HV+D A + DV+ R A Sbjct: 236 ASVGLRPINALVDITNFITHDRARPLHVYDRALMVGDVIEARLGKGPAEPSATDAASPAA 295 Query: 282 CSGEKILALDNQEYDLSPDNVVIA-SDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 E+++ALD + YDL+P+ +IA +DG R + G++GG+ GC + TTDV VE A +D Sbjct: 296 HKDEQLIALDGKTYDLTPEMSIIADADGQRPIGLGGVMGGESTGCSETTTDVFVECAWFD 355 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 PI A++G+ GI +D++YRF RGVD Q ++P L+ ++IL LCGG AS+I +A Sbjct: 356 PIVTAQTGRITGINSDAQYRFARGVDPQSVVPGLELATAMILELCGGEASEIRLAGEAPA 415 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 P I F + VK+L+G+D+P + IL LGF V G V+ PSWR+DVE KADL Sbjct: 416 PPAPIAFDRAYVKKLAGLDLPAQRIDAILTDLGFEVAGNA----VTPPSWRRDVEGKADL 471 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VEE+ RI G D + +EPLP L+L+Q R R +R LA+R E + WSF+ + Sbjct: 472 VEEVARIAGYDNLPTEPLPEVATPAGGVLTLRQRRLRDARRSLAARGYSEAITWSFMRRA 531 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + LFGGGQ EL + NPI++D+ MR S L L++A RN R D A+FE + D Sbjct: 532 FAELFGGGQAELVLANPIASDLDCMRPSALGNLIEAAARNARRGFPDAALFEAGPNFRGD 591 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P G ++ A + + W+ + + LF KAD +++++ + Sbjct: 592 AP-GDQWTAVTALVAPH----APKSWTKTAPD-----PLFALKADLIALLDELGAPQLQV 641 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + W+HPGRS ++ ++V+ FGE HP +L P+ FEV LD+IP +K Sbjct: 642 VQGQNSPWWHPGRSARLQLGPKVVVAEFGELHPQVLKALDAEGPMLAFEVNLDAIPEPKK 701 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSL 758 K KT+ + LS L P+KRD AF+V PAG LV I D+ LI DV VFDV+QG + Sbjct: 702 KGLKTRAALELSPLMPLKRDFAFVVSADTPAGDLVRPILGADKQLIADVRVFDVYQGPGV 761 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG+KSVAI+V +QP + T D +I L RIV K A LR Sbjct: 762 PEGQKSVAIEVTVQPREKTLTDAEIEALSARIVAAAEKAAGAKLRG 807 >gi|126734578|ref|ZP_01750324.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] gi|126715133|gb|EBA11998.1| phenylalanyl-tRNA synthetase beta subunit [Roseobacter sp. CCS2] Length = 798 Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust. Identities = 337/816 (41%), Positives = 476/816 (58%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD S+ I LT +GLEVE ++N E L+ FTI KVL+ E++PD D Sbjct: 1 MKFTLSWLKHHLETDASVADITYALTDLGLEVEGIENPIERLADFTIGKVLTAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT Q++CGAPN R G+ V A PG+ +P + + V KIRGIES GMM Sbjct: 61 KLKVCQVDTAD-GPTQIICGAPNARAGITVVIASPGTYVPGIDTTIGVGKIRGIESYGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIGVRG 173 CSE+E+ LS++ I+ELP VG R +D+L + DP+I++++TPNR D +GVRG Sbjct: 120 CSEREMELSEEHDGIIELP-SGEVGDRFTDWLAANKPDKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A DL A GLG LK I + +S L + D D C F +KGV+N +P+W Sbjct: 179 VARDLAARGLGTLKPITVDPVKASFRADLNVSIDDDTRDGCPIFCGYLIKGVKNGPSPDW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ +L+A+GLR IS LVD+TN+ + D P HVFDA +++ L V RA GE I ALD++ Sbjct: 239 LQAQLRAIGLRPISFLVDVTNWFTYDLNRPLHVFDADKVNGNLRVHRAAGGETITALDDK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +Y L +VI+ D +SIAG++GG GC +T +V VE A WDPI IA +G+ L I Sbjct: 299 DYTLQAGQMVISDDNGPESIAGVMGGLETGCTADTVNVFVESAYWDPIQIAYTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD L++ V +I+ GG S++ A + R V Sbjct: 359 SDARYRFERGVDPAFTPEGLEYAVRMIVDHAGGEVSELIQAGAVPDTSRACKLDAKRVIS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+D+P L LGF++ G+ VPSWR DV+ +ADLVEE+ R+ + +++ Sbjct: 419 LVGMDIPEATQRETLTALGFTMEGDM----AHVPSWRPDVQGEADLVEEVARVASLTKLE 474 Query: 474 SEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP K L+ Q+R + +R A+ E V +SFI K+ + LFGGG Sbjct: 475 GKPLPRIDAGVPKPILTPSQTRQQAARRTAAALGYNECVTYSFIDKDAAQLFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR +LL GLL+A RN R D +FEV + P Q + +G+ Sbjct: 535 LENPISSEMSHMRPNLLGGLLRAAARNQARGFMDMGLFEVGAGFHGGEPGEQHMLVSGVL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VDL+DAKADA +V+ + ++ GA W+H Sbjct: 595 VGRTGPKDVHGT-----------SRPVDLYDAKADAEAVLAAIGAPAKVQILRGADDWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + VLG FGE HP ++ + P F ++ D +P+ KK++ T+ + Sbjct: 644 PGRHGKICLGPKKVLGIFGELHPRVVRAMDIKGPAVAFTIWPDEVPLP-KKKSATRPALA 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 + L V+RD AF+VD + A LVN D+ LI DV VFD F G SLGEGKKS+A+ Sbjct: 703 ATDLQAVERDFAFVVDAQVEALALVNAAAGADKALITDVRVFDEFIGGSLGEGKKSLAVT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T +D DI + +IVE V K T VLR+ Sbjct: 763 VRLQPTDKTLKDADIEAVSAKIVEKVSKATGGVLRA 798 >gi|329113301|ref|ZP_08242082.1| Phenylalanyl-tRNA synthetase beta chain [Acetobacter pomorum DM001] gi|326697126|gb|EGE48786.1| Phenylalanyl-tRNA synthetase beta chain [Acetobacter pomorum DM001] Length = 819 Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust. Identities = 328/841 (39%), Positives = 494/841 (58%), Gaps = 60/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWL DHLDT +LE+IC L IGLEVE V+NR A+ PF ++L + +P+ D Sbjct: 1 MKFTLSWLYDHLDTQATLEEICAKLNQIGLEVESVENRGAAIEPFLTARILDAQPHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+D G Q++QVVCGAPN R GL ++A PG+ +P ++ + KIRG S GM Sbjct: 61 RLQVCRVDAGPGFQDVQVVCGAPNARKGLAVIFAKPGTYVPGLDITIKAGKIRGEASGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L ++S I ELP D G +D+ L D +ID+++TPNR D +GVRG+A D Sbjct: 121 LCSLRELGLGEESNGIAELPEDTLPGQSYADFAGLDDVVIDIAITPNRGDALGVRGVARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 L AAGLG L+ P +E++ + +D+ C ++GV+N +P W Sbjct: 181 LAAAGLGTLR------PWLAETVEGTFESPVVWDISYPEACPWVLGRTIRGVKNGPSPEW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 ++++L+++GLR ISALVDITNY D G P HVFDA++I+ LT+ R GE+ ALD Sbjct: 235 LQRKLESIGLRPISALVDITNYFCFDLGRPLHVFDAAKIAGGKLTICRG-EGEQFRALDG 293 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q+Y + P++ VIA +QS+AGI+GG+ G TTDV VE AL+D + IA S + +G+ Sbjct: 294 QDYTVGPEDCVIADQAGVQSLAGIMGGEATGATAETTDVFVECALFDAVKIALSARRVGV 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +DS YRFERGVD + L+ LI+ LCGG AS++ A R + V+ Sbjct: 354 SSDSSYRFERGVDPALPVSALEAATRLIIELCGGEASEVVSAGAQPAWQRDATLRFARVR 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEK--------------- 456 L G+DVP ++S+ +LE+LGF V + + VSVPSWR D+ +K Sbjct: 414 DLGGLDVPADESVDLLEKLGFEVQDRNNTQVRVSVPSWRNDIAQKPILAQGEGIPADVAA 473 Query: 457 ------------ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +DLVEE+LR+ G+D + + PLP V + L+ +Q+R +R LA+ Sbjct: 474 KAAEGVAAIESESDLVEEVLRLKGLDAVPAVPLPSVVVVPEAALTPRQARLALARRFLAA 533 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 R + E V +SF+S E++ FGG L +LNPI++D+ MR + + LL A N R Sbjct: 534 RGLTETVGFSFVSHEEAERFGGAPESLRLLNPIASDLDQMRPTPMINLLAAVKHNSARGW 593 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 D +FEV + ++ Q+ + AG+R G + GR + V L+ KAD Sbjct: 594 GDLGLFEVGPAFAENS---QQPVVAGVRSGHT-PRYPGRA--------GQPVSLWAVKAD 641 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 AL +++ V+ D++ + AP WYHPGRSG+++ + VL YFGE HP++L G+ P Sbjct: 642 ALELLQQLGVNPDAMSTTTDAPGWYHPGRSGVLRQGPKNVLAYFGELHPSLLQAEGIDVP 701 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 + GFE+ D +P ++K+ K LS+ PV+RD AF+V + +P L+ ++ +R Sbjct: 702 VVGFELLPDMVPDPKRKK---KVAPRLSAFQPVRRDFAFVVARDVPGEKLLRAVRGAERQ 758 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ DV++FDV++G + EG +S+ ++V +QP+ + D ++ + ++IV V K T A L Sbjct: 759 LVADVSLFDVYEGPHVPEGHRSIGVEVTLQPMDKSLTDAELEAVSEKIVAAVTKATGATL 818 Query: 803 R 803 R Sbjct: 819 R 819 >gi|148555343|ref|YP_001262925.1| phenylalanyl-tRNA synthetase subunit beta [Sphingomonas wittichii RW1] gi|148500533|gb|ABQ68787.1| phenylalanyl-tRNA synthetase beta subunit [Sphingomonas wittichii RW1] Length = 792 Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust. Identities = 331/797 (41%), Positives = 472/797 (59%), Gaps = 23/797 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT+ L+ I + LT +GLEVE V D E L F I ++L+ +P D Sbjct: 1 MKFTLSWLKEHLDTEAGLDAIVEGLTRVGLEVEGVEDAAEKLGAFRIARILTAAPHPQAD 60 Query: 60 -CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 +L +D G + +Q+VCGAPN R GL+GV PG +P ++ + V IRG+ES GM Sbjct: 61 KLQVLSVDAGDGGDPLQIVCGAPNARAGLVGVLGRPGDYVPGIDVTLKVAAIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCS +EL LSD I+ELP DAPVG +D+ LSDP+IDV++TPNR DC+GVRGIA D Sbjct: 121 MCSMRELELSDAHDGIIELPADAPVGAVYADWAGLSDPVIDVAITPNRQDCMGVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAGLG L+ +N+ + P+EI+ DD C F V+GV N +P W+ +R Sbjct: 181 LAAAGLGALRPLNLPSIIGQGECPIEIR--TDDPEGCPAFFGRAVRGVVNGDSPEWLAKR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L AVG R ISALVDITNYV LD G P HV+D +R+S L R+A GE++LAL+ + Y L Sbjct: 239 LIAVGQRPISALVDITNYVMLDHGRPLHVYDLARLSGPLVARKATPGEEVLALNGKSYTL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA I GI+GG+ G TTDVL+E A + P IAR+G+ LG+ +D+R Sbjct: 299 DETMTVIADANGPDDIGGIMGGEKTGVTAATTDVLIECAYFTPEAIARTGQKLGLTSDAR 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERGVD Q + L L+ LCGGT S + A + + + + ++++G+ Sbjct: 359 ARFERGVDPQFLEAGLAIATRLVTELCGGTPSPVVQAGTPPSGTKALRYDPTLTEKIAGL 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V + IL LGF + ++ VSVPSWR+DV+ ADLVEE++RI G+D I S PL Sbjct: 419 AVEPDRQRTILAALGFGIDAVWN---VSVPSWRRDVDGPADLVEEVVRIIGIDNIPSTPL 475 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + + + Q R +R A+R + E V WSFIS+ ++ FGGG L NPI Sbjct: 476 PRGEGVARPTATQAQKVERRARRTAAARGLNEAVTWSFISEAEARPFGGGAWTLA--NPI 533 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S ++ MR SLLPGL+ A RN DR +FEV G++Y+A G Sbjct: 534 SEELKVMRPSLLPGLVAAARRNADRGAGSIRLFEV----------GRRYLADGEGLTLGL 583 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLR-FESGAPSWYHPGRSGI 655 + R D + + D FDAKA+A++++ +D L+ FE+ + YHPGRSG Sbjct: 584 LLAGDRTPRDWRSGKAQAFDAFDAKAEAVAMLGAVGAPVDRLQLFETVSSGVYHPGRSGS 643 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + VL FGE HP++ F + + EV+LD++P+ + ++ +L Sbjct: 644 LRLGPKTVLAEFGELHPSVARAFDIDGTVVAAEVFLDAVPVKRASSDHMREAYAPPALQA 703 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V+RD AF+V A L+ ++ D+ I + +FD+FQG+ +GEG+KSVAI+V++QP Sbjct: 704 VRRDFAFLVSADRAADELLRAVRGADKAAIAEARLFDLFQGQGVGEGEKSVAIEVVLQPS 763 Query: 775 KDTFRDDDIRILMDRIV 791 + +F D D++ + ++IV Sbjct: 764 EKSFTDADLQAISEKIV 780 >gi|294013443|ref|YP_003546903.1| phenylalanyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] gi|292676773|dbj|BAI98291.1| phenylalanyl-tRNA synthetase beta chain [Sphingobium japonicum UT26S] Length = 804 Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust. Identities = 336/826 (40%), Positives = 481/826 (58%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD L I LT+IGLEVE V+N E L F I +VL+ ER+P D Sbjct: 1 MKFTLSWLKTHLNTDADLPTILKGLTNIGLEVEGVENPAEKLGAFRIARVLTAERHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G+ IQVVCGAPN R GL+GV+ G+ +P N M++ IRG+ES GMM Sbjct: 61 KLQVLTVDAGEGA-IQVVCGAPNARAGLVGVFGTEGAVVPVNGMVLKKTAIRGVESNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I+EL DAPVG + + L DP+IDVS+TPNR DC+GVRGIA DL Sbjct: 120 CSFRELELGEDHDGIIELSADAPVGQSYAAWAGLDDPVIDVSITPNRQDCMGVRGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG L + + ++ P ++D+ C F V+GVRN +P WM ++L Sbjct: 180 AAAGLGTLNALIVPVIEAAGPGP---DVRIEDAEGCPAFFARTVRGVRNGSSPEWMAKQL 236 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+G + IS LVDITNY+ +D G P HV+D + + L RR SGE++LAL+ + Y + Sbjct: 237 KAIGQKPISTLVDITNYIMIDLGRPLHVYDMATLKGGLVARRGRSGEQVLALNGKSYAVD 296 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D + I GI+GG+H+G + TTDVL+E A + P IA +G+ LG+ +D+R Sbjct: 297 ESMTVIADDEAVHDIGGIMGGEHSGATEATTDVLIECAYFTPERIAVTGQKLGLTSDARA 356 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L L+ LCGG+AS+ A + + + + ++ L+G+D Sbjct: 357 RFERGVDPAFLDDGLSIATYLVTHLCGGSASEATRAGSPPAAAKTVTYDPAQCLALAGVD 416 Query: 419 VPIEDSLRILERLGFSVIGEYDKFE--------------VSVPSWRQDVEEKADLVEEIL 464 V + RILE LGF+V G FE V+VPSWR+DV+ D+VEE++ Sbjct: 417 VGDSEQKRILESLGFAVEGHDATFEYQDGVPVTTPANWTVTVPSWRRDVDGWPDIVEEVV 476 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RI G+DQ+ S PLP K + +Q+ R V+R A+R + E +NWSFIS++++ Sbjct: 477 RIVGLDQVPSTPLPRAPGVAKPTATPEQAVERRVRRTAAARGLAEAINWSFISEKEAAAV 536 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 GGG L NPIS D+ MR SLLPGLL AT RN DR A +FE+ Y D Sbjct: 537 GGGAWTLA--NPISEDLKVMRPSLLPGLLSATRRNADRGAASVRLFELGRRYLADRERAT 594 Query: 585 -KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI----EPFVSLDSLR 639 ++ AG E R W + + FDAK++ ++++ P +L S Sbjct: 595 VGFVLAG--------EKVARGWQTG---KAQPFSAFDAKSEVIALLAAAGAPVANLQSFG 643 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 SGA YHPG+SG ++ + VL FG HP++ FGL+ + EV+LD+IP +++ Sbjct: 644 EASGA---YHPGQSGTMRLGPKTVLAEFGVLHPSLAKQFGLTGTVVAGEVFLDAIP-AKR 699 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSL 758 + +L VKRD AF++D+ + A TLV ++N D + I + +FD+F G + Sbjct: 700 ASGFMRAPYAPPALQAVKRDFAFVIDEAVEAETLVRAVRNADKKAIVEARLFDMFVGPGV 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EGKKS+AI++ +QP + +F +++ + +V+ +K LR Sbjct: 760 EEGKKSLAIEITLQPGEKSFSQEELDTISAAVVK-AAEKLGGTLRG 804 >gi|94497860|ref|ZP_01304426.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingomonas sp. SKA58] gi|94422749|gb|EAT07784.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingomonas sp. SKA58] Length = 809 Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust. Identities = 335/827 (40%), Positives = 475/827 (57%), Gaps = 41/827 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD L I TL +IGLEV+ V+N E L+ F I +VL+ +++P D Sbjct: 1 MKFTLSWLKTHLDTDADLTTILKTLNAIGLEVDGVENPAEKLAGFKIARVLTADKHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G Q +QVVCGAPN R GL+GV+ G+ +P N M++ IRG+ES GMM Sbjct: 61 KLQVLTVDHGDGQPLQVVCGAPNARAGLVGVFGLEGAVVPSNGMVLKKTAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L DD I+EL DAPVG +++ L DP+IDVS+TPNR DC+GVRGIA DL Sbjct: 121 CSTRELELGDDHDGIIELAPDAPVGQVYANWAGLDDPLIDVSVTPNRQDCMGVRGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG L I + + P DD C F V+GV N +P WM +RL Sbjct: 181 AAAGLGTLNAIIVQEIAGAGPGP---DVRTDDPDGCPAFYARTVRGVANGASPEWMARRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+G + ISALVDITNY+ +D G P HV+D + + L R+ SGE++LAL+ + Y + Sbjct: 238 KAIGQKPISALVDITNYIMIDLGRPLHVYDMATLKGGLVARKGRSGEQVLALNGKTYTVD 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D + I GI+GG+H+G +TTDVL+E A + P IA +G+ L + +D+R Sbjct: 298 ETMTVIADDEAVHDIGGIMGGEHSGAQASTTDVLIECAYFTPERIAATGQKLALTSDARG 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L L++ LCGG S+ A R + + + L+G+D Sbjct: 358 RFERGVDPAFLDDGLSIATDLVVRLCGGIPSEATRAGTPPVALRTLAYSPDQCHALAGVD 417 Query: 419 VPIEDSLRILERLGFSVIGEYDKFE--------------VSVPSWRQDVEEKADLVEEIL 464 VP ++ RILERLGF V G+ + E V+VPSWR+DV+ D+VEE++ Sbjct: 418 VPADEQKRILERLGFGVSGDANSVEYQDGMPVSVPGHWTVTVPSWRRDVDGWPDIVEEVV 477 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RI G+D + S PLP T + + +Q R V+R A+R + E +NWSF+S++++ Sbjct: 478 RIVGLDHVPSTPLPRTPGVARPTATPEQLVERRVRRTAAARGLAEAINWSFLSEKEAAAV 537 Query: 525 GGGQRELE--ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 GGG + + NPIS D+ MR SLLPGLL AT RNVDR A +FE+ Y + Sbjct: 538 GGGDWTPDWILANPISEDLKVMRPSLLPGLLSATKRNVDRGAASVRLFELGRRYFK---Q 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI----EPFVSLDSL 638 G++ + G E R W + + D FDAKA+ ++++ P +L Sbjct: 595 GERATVGFVLAG----EKVARGWQSG---KAQPFDAFDAKAEVIALLAAAGAPVANLQGF 647 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 S A YHPG+SG ++ ++VL +G HP++ FGLS + E++LD+IP + Sbjct: 648 GEASAA---YHPGQSGTLRLGPKMVLAEYGVLHPSLARQFGLSGAVVAGEIFLDAIP-PK 703 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 +K + +L VKRD AF+V + A LV ++ D + I D +FDVF G Sbjct: 704 RKSGALRAPYAPPALQAVKRDFAFLVPADVEADALVRAVRGADKKAIVDARLFDVFVGPG 763 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +G KS+AI+V +QP +F D++ + +V+ K A LR Sbjct: 764 VEDGHKSLAIEVTMQPGDKSFSQDELEAISASVVK-AAAKLGATLRG 809 >gi|163732666|ref|ZP_02140111.1| phenylalanyl-tRNA synthetase, beta subunit [Roseobacter litoralis Och 149] gi|161394026|gb|EDQ18350.1| phenylalanyl-tRNA synthetase, beta subunit [Roseobacter litoralis Och 149] Length = 799 Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust. Identities = 327/814 (40%), Positives = 470/814 (57%), Gaps = 25/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT +L++I LT +GLEVE V++R L FTI V S E++PD D Sbjct: 1 MKFTLSWLKEHLDTTATLDEITYALTDLGLEVEGVEDRAGKLRDFTIGYVKSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ T + + Q++CGAPN R G+ V A PG +P + + V KIRGIES GMM Sbjct: 61 RLKVCQVATDEGDK-QIICGAPNAREGITVVVAKPGVYVPGIDTTIGVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+E+ LS++ I+ELP VG D+L DP +I++++TPNR D +GVRG Sbjct: 120 ASEREMELSEEHDGIIELP-SGEVGQSFVDWLAEHDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK +++ P+ I + D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPRDVAAVEGVFPCPVSITIEADTLEQCPVFFGRVIRGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 ++ +L+A+GLR IS LVD+TN+ + DR P HVFDA +I + L V RA GE ++ LD Sbjct: 239 LQDKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKIEGNTLRVHRAKGGETLVGLDE 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY + +I+ ++SIAG++GG GC TT+V +E A +DP+ A +G+ L I Sbjct: 299 KEYTFAEGMTLISDAANVESIAGVMGGLATGCTAETTNVFIEAAYFDPVRTAYTGRALKI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERG+D + ++H +IL GG S++ +A I R + V+ Sbjct: 359 NSDARYRFERGIDPEWTPYGIEHATHMILEHAGGEPSEVIVAGKIPDTNRAYKLDAARVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+D+P + + L LGF + G VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMDIPESNQRQTLTALGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKL 474 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 K PLP L + + LS Q R +R A+ E V++SFI + + LFGGG+ Sbjct: 475 KGRPLPRLDEGVSRPILSPIQRREAMARRTCAALGYNECVSYSFIDQASAKLFGGGEDVT 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS+DMS+MR +LLPGLL+A RN R + A+FEV + P Q + +G+ Sbjct: 535 RLENPISSDMSHMRPALLPGLLQAAARNQARGNMNLALFEVGPAFHGGEPGEQHLLVSGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GR R VD++D KADA +V+ + ++ GA W+HPG Sbjct: 595 L--------IGRTEPKDVHGASRAVDVYDVKADAEAVLAAIGAPAKVQILRGAAPWWHPG 646 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R G+I + VLG FGE HP +L + P GF ++ +P+ +K T+ + +S Sbjct: 647 RHGMICLGPKKVLGVFGEIHPRVLAAMDVKGPAMGFTIWPAEVPLP-RKSGATRAALQIS 705 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 L V+RD AF+VD + A TLVN D+ LI+D VFD F G SLGEGKKS+A+ V Sbjct: 706 DLQAVERDFAFVVDSGVEALTLVNAAMGADKALIEDARVFDEFIGGSLGEGKKSLALTVR 765 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP T D DI + ++VE V+K T VLR+ Sbjct: 766 MQPATQTLTDKDIEAVSAKVVEKVIKATGGVLRA 799 >gi|254420608|ref|ZP_05034332.1| phenylalanyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] gi|196186785|gb|EDX81761.1| phenylalanyl-tRNA synthetase, beta subunit [Brevundimonas sp. BAL3] Length = 812 Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust. Identities = 323/823 (39%), Positives = 477/823 (57%), Gaps = 43/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T+ + +I + +T GLEVE+V D L+PFT+ ++LS ER+P+ D Sbjct: 1 MKFTLSWLKDHLETEADVHQIAEAMTMAGLEVEEVLDPAAKLAPFTVARILSAERHPNAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + +D K ++VCGAPN R GL ++AP G+ +P + + + +RG+ S Sbjct: 61 RLQVCQVETVDGVK----EIVCGAPNARAGLTTIYAPIGAYVPGLGVTLVEKPVRGVVSN 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L+D+S I ELP++ PVG ++ ++P+ID +TPNR D +GV GIA Sbjct: 117 GMLCSASELELADESDGIQELPLEIPVGTPVAGLFG-AEPVIDFEVTPNRPDWLGVAGIA 175 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AA +GKLK +I+ + + P I LD +C FA ++GV+N +P W++ Sbjct: 176 RDLAAASVGKLKHFDIA--VVRGAFPSPITVRLDAPEMCPVFAGRVIRGVKNGPSPAWLQ 233 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS------------ 283 +RL A+GLRSI+ LVD+TN ++ DR P HV+D +++ V R Sbjct: 234 KRLTAIGLRSINRLVDVTNLIAYDRARPLHVYDVAKLVGTEIVVRGGQVSAETAHIEGGE 293 Query: 284 GEKILALDNQEYDLSPDNVVIASDG--RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 E ++ALD + Y + + VIA G R + G++GG+ GCD+ TTDV +E A +DP+ Sbjct: 294 PEHLIALDGKTYTAAATDCVIADAGGERPIGLGGVMGGESTGCDETTTDVFIESAWFDPL 353 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 IA++G+ LGI +D++YRF RGVD + P L+ LIL LCGG S+I + P Sbjct: 354 VIAQTGRALGIHSDAQYRFARGVDPVSVTPGLELATRLILDLCGGEPSEIVFVGDPPASP 413 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKA 457 F + VKRL+G+D+ + IL +LGF + G+ + + V+ PSWR+DVE +A Sbjct: 414 APFAFDPAYVKRLTGMDLDDDRIGTILGQLGFLITAAPAGQAEPWIVTPPSWRRDVEGRA 473 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DLVEE+ RI G D + PLP LS +Q+R R +R LA+ E V WSF Sbjct: 474 DLVEEVARIEGFDSLPDTPLPEVARPAGGVLSPRQARVRTARRALAALGYAEAVTWSFTK 533 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + + LFGGG L + NPI+AD+ MR S LP L++A RN R AD A+FE+ VY Sbjct: 534 QSTAALFGGGDDRLVLENPIAADLDCMRPSALPNLIQAAARNAARGFADAALFEIGPVYL 593 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLD 636 D P+ Q+ + A + + R W+ E+ LF KAD +++E + Sbjct: 594 GDGPKDQRTVIAALVAPH-----AARHWAGAGEDA-----LFALKADLTTLLEEIGAPVA 643 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 SL+ G W+HPGRS ++ + V+ FGE HP +L P+ GFE+ LD++P Sbjct: 644 SLQLAQGQNRDWWHPGRSARLQLGPKNVMVEFGELHPRVLKALDADGPMLGFEIVLDAVP 703 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 + K K + LS+ P+ RD AF+V+ P G LV D+ LI +V VFDV++ Sbjct: 704 EPRGKSGKARGSADLSAFMPLTRDFAFVVEDAKPVGDLVRAAAGADKALIAEVRVFDVYR 763 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 GK + +G KSVA++V+IQP + T + +I +L +IV V K+ Sbjct: 764 GKGVDDGFKSVALEVVIQPREATLAEAEIEVLTAKIVAAVEKQ 806 >gi|110678357|ref|YP_681364.1| phenylalanyl-tRNA synthetase subunit beta [Roseobacter denitrificans OCh 114] gi|109454473|gb|ABG30678.1| phenylalanyl-tRNA synthetase, beta subunit [Roseobacter denitrificans OCh 114] Length = 799 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 327/814 (40%), Positives = 468/814 (57%), Gaps = 25/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT +L++I LT +GLEVE V++R L FTI V S E++PD D Sbjct: 1 MKFTLSWLKEHLDTSATLDEITYALTDLGLEVEGVEDRAGKLRDFTIGYVKSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ T + + Q++CGAPN R G+ V A PG +P + + V KIRGIES GMM Sbjct: 61 RLKVCQVATDEGDK-QIICGAPNAREGITVVVAKPGVYVPGIDTTIGVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+E+ LS++ I+ELP VG D+L DP +I++++TPNR D +GVRG Sbjct: 120 ASEREMELSEEHDGIIELP-SGEVGRSFVDWLAEHDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK +++ P+ I + D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKPRDVAAVEGVFPCPVSITIEADTLEQCPVFFGRVIRGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 ++ +L+A+GLR IS LVD+TN+ + DR P HVFDA +I L V RA GE ++ LD Sbjct: 239 LQDKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKIEGKTLRVHRAKGGETLVGLDE 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY + +I+ ++SIAG++GG GC TT+V +E A +DP+ A +G+ L I Sbjct: 299 KEYTFAEGMTLISDAANVESIAGVMGGLATGCTAETTNVFIEAAYFDPVRTAYTGRALKI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERG+D + ++H +IL GG S++ +A I R + V+ Sbjct: 359 NSDARYRFERGIDPEWTPYGIEHATHMILEHAGGEPSEVIVAGKIPDTNRAYKLDAARVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+D+P + L LGF + G VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMDIPESSQRQTLTALGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKL 474 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 K PLP L + + LS Q R +R A+ E V++SFI + + LFGGG+ Sbjct: 475 KGRPLPRLDEGVSRPILSPIQRREAMARRTCAALGYNECVSYSFIDQASAKLFGGGEDVT 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS+DMS+MR +LLPGLL+A RN R + A+FEV + P Q + +G+ Sbjct: 535 RLENPISSDMSHMRPALLPGLLQAAARNQARGNMNLALFEVGPAFHGGEPGEQHLLVSGV 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GR R VD++D KADA +V+ + ++ GA W+HPG Sbjct: 595 L--------IGRTEPKDVHGASRAVDVYDVKADAEAVLAAIGAPAKVQILRGAAPWWHPG 646 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R G+I + VLG FGE HP +L + P GF ++ +P+ +K T+ + +S Sbjct: 647 RHGMICLGPKKVLGVFGEIHPRVLAAMDVKGPAMGFTIWPAEVPLP-RKSGATRAALQIS 705 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 L V+RD AF+VD + A TLVN D+ LI+DV VFD F G SLGEGKKS+A+ V Sbjct: 706 DLQAVERDFAFVVDSGVEALTLVNAAMGADKALIEDVRVFDEFIGGSLGEGKKSLALTVR 765 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP T D DI + ++VE V+K T LR+ Sbjct: 766 MQPATQTLTDKDIEAVSAKVVEKVIKATGGTLRA 799 >gi|85375596|ref|YP_459658.1| phenylalanyl-tRNA synthetase subunit beta [Erythrobacter litoralis HTCC2594] gi|84788679|gb|ABC64861.1| phenylalanyl-tRNA synthetase beta chain [Erythrobacter litoralis HTCC2594] Length = 810 Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust. Identities = 329/813 (40%), Positives = 473/813 (58%), Gaps = 27/813 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+++WL+DHL+T+ LE+I TL IG EVE V D E L+ FT+ KVL+ +++PD D Sbjct: 1 MKFSITWLRDHLETEAGLEEIVATLNRIGHEVEGVEDPAEKLAGFTVAKVLTADKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG+ +QVVCGAPN R G+ GV PG+ +P N M + IRG+ES GMM Sbjct: 61 KLQVLTVDTGEGDPLQVVCGAPNARAGMKGVLGLPGATVPSNGMELRKSAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L ++ I+ELP DAPVG +DY S P++DV++TPNR DC+GV GIA DL Sbjct: 121 CSVRELELGEEHDGIIELPEDAPVGHSFADY-HGSSPVLDVAITPNRPDCMGVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK I + + + P+EI+ DD C F +KGV N +P+W++ RL Sbjct: 180 AAAGLGTLKPIAVPDFEAKGACPVEIR--TDDPEGCPAFYGRVIKGVNNGPSPDWLQLRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 K+ G R IS LVD+TNYV L G P+H +D ++++ + RRA +GE++LAL+ + Y L Sbjct: 238 KSAGQRPISLLVDLTNYVMLAYGRPAHAYDLAKLTGAVVARRAKNGEQVLALNEKTYTLD 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D + IAGI+GG+ +G D+TTDVL+E+A +DP I +G+ LG+ +D+R Sbjct: 298 ETMTVIADDAGVHDIAGIMGGEDSGVTDSTTDVLLEIAYFDPERIGVTGRKLGLASDART 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + + L + LI+ L GG AS++ A + F + V+RL GID Sbjct: 358 RFERGVDPEFLETGLDLLTGLIVELAGGEASEMVKAGTPPQDKMVVDFEPALVQRLGGID 417 Query: 419 VPIEDSLRILERLGF----SVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 V D L ILE LGF + +G K + + VP R DVE ADLVEEI+R G+D+++ Sbjct: 418 VEEADQLAILESLGFVATQTQVGPGAKTWRIEVPLRRHDVEGPADLVEEIVRNVGLDKVE 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQ 528 S LP + S QQ R ++R A+ + E V WSF+ ++ F GG+ Sbjct: 478 SVALPRVDGVARPTASPQQVLERKLRRTAAASGLHEAVTWSFLPTAEAEHFALRQAQGGR 537 Query: 529 RELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 +L +L NPIS DM MR S+LPGLL A R+ DR A +FE+ Y D +K Sbjct: 538 GKLWVLENPISEDMKAMRPSMLPGLLMAAKRDADRGAAGSGLFEIGRRYFRGKDGASDEK 597 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA-DALSVIEPFVSLDSLRFESGA 644 + G E + R W+ + + D +DAK + +D L A Sbjct: 598 PTLGVVLVG----EKTARGWASG---KPQGYDAYDAKGVAEALLAAAGAPVDKLMVMGEA 650 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPG+SG ++ + VL FG HP L + L P E++LD+IP + + + Sbjct: 651 GDQFHPGQSGTLRLGPKNVLARFGALHPATLKAYDLDGPAMAVELFLDAIPAKKGRGSFA 710 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKK 763 + +L + RD AF+V + AG LV IK D+ I D VFDVF G+ + EG+K Sbjct: 711 RVAFAPPALQSITRDFAFLVPSDLAAGDLVRAIKGADKQAITDARVFDVFAGQGVPEGRK 770 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 SVA++V +QP + +F+D++I+ + D++V K Sbjct: 771 SVAVEVTLQPGEKSFKDEEIKAISDKVVAAAAK 803 >gi|302381606|ref|YP_003817429.1| phenylalanyl-tRNA synthetase subunit beta [Brevundimonas subvibrioides ATCC 15264] gi|302192234|gb|ADK99805.1| phenylalanyl-tRNA synthetase, beta subunit [Brevundimonas subvibrioides ATCC 15264] Length = 812 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 326/830 (39%), Positives = 476/830 (57%), Gaps = 44/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T S + + +T GLEVE V D AL+PFT+ K++S ER+P+ D Sbjct: 1 MKFTLSWLKDHLETTASAAGVAEAMTMAGLEVEHVADPTVALAPFTVAKIVSAERHPNAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + ID K ++VCGAPN R GL ++AP G+ +P + + + +RG+ S Sbjct: 61 RLQVCQVETIDGMK----EIVCGAPNARAGLTTIYAPIGAWVPGLGVTLVEKPVRGVVSN 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L+D+S I ELP + PVG ++ ++P+ID +TPNR D +GV GIA Sbjct: 117 GMLCSASELQLADESDGIQELPPEIPVGTPVAKLFG-AEPVIDFEVTPNRPDWLGVAGIA 175 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AAG+G LK +I+ + P+ ++ LD +C FA ++GV N +P W++ Sbjct: 176 RDLAAAGVGTLKHFDIAVVRGAYPCPISVR--LDAPEMCPVFAGRVIRGVSNGPSPAWLQ 233 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC------------S 283 RL+A+GLRSI+ LVD+TN ++ DR P HV+D ++ V RA + Sbjct: 234 TRLQAIGLRSINRLVDVTNLIAYDRARPLHVYDVGKLVGTEIVVRAGQVSAGSEHIAAGT 293 Query: 284 GEKILALDNQEYDLSPDNVVIAS--DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 E+++ALD + Y + P VIA R + G++GG+ GC D TTDV +E A +DP+ Sbjct: 294 PEQLIALDGKTYGVDPTMCVIADAMGERPIGLGGVMGGESTGCSDETTDVFLESAWFDPL 353 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 A++G++L I +D++YRF RGVD + P L+ LIL LCGG S+I P Sbjct: 354 VTAQTGRSLTINSDAQYRFARGVDPVSVTPGLELATRLILDLCGGEPSEIVFVGEPPASP 413 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV----IGEYDKFEVSVPSWRQDVEEKA 457 F + VK+LSG+D+ + IL +LGF V G + V+ PSWR+DV KA Sbjct: 414 APFAFDPAYVKQLSGMDLSEDRIGTILSQLGFLVQAAPAGAAGPWIVTPPSWRRDVGGKA 473 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DLVEE+ RI+G + + PLP K L+ +Q+R R +R LA+ E V WSF Sbjct: 474 DLVEEVTRIHGFQHLPATPLPDQGAPSKGVLNPRQTRVRIARRALAALGYSEAVTWSFTR 533 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 ++ + LFGGG L + NPI++D+ MR S+LP L++A RN R AD A+FE+ +Y Sbjct: 534 RDIATLFGGGDERLIVDNPIASDLDCMRPSVLPNLIQAAARNAARGHADVALFEIGPIYL 593 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLD 636 D P Q+ + +G+ + R W+ E+ LF K D +SV+E + Sbjct: 594 GDRPTDQRTVISGLVSAR-----AARHWAGSGEDA-----LFGLKGDLMSVLEAIGAPVG 643 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 SL+ G+ W+HPGRS ++ + V+ FG HP +L P+ FE+ LD++P Sbjct: 644 SLQLAQGSNRDWWHPGRSARLQLGPKTVIAEFGALHPRVLKGLDADGPLLAFEIILDAVP 703 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 + K TK + L +L P+ RD AF+V + AG LV ++ D+ LI DV VFDV++ Sbjct: 704 EPKSKPTKARGNADLPNLMPLTRDFAFVVAEDRAAGDLVRAVQGADKALITDVRVFDVYR 763 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G + +G KSVA++V++QP + T D DI L RIV +KT A LR Sbjct: 764 GPGVDDGSKSVALEVVVQPREATLTDADIEALSTRIV-TAAEKTGARLRG 812 >gi|310814730|ref|YP_003962694.1| phenylalanyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] gi|308753465|gb|ADO41394.1| phenylalanyl-tRNA synthetase, beta subunit [Ketogulonicigenium vulgare Y25] Length = 798 Score = 575 bits (1481), Expect = e-161, Method: Compositional matrix adjust. Identities = 332/819 (40%), Positives = 468/819 (57%), Gaps = 36/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT S+E+I + LT +GLEVE V+++ A L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLDTTASVEEITEALTDLGLEVEGVEDKTARLRGFKIGKVLNAVQHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C +L D E Q+VCGAPN R G+ V A PG+ +P ++ + V KIRG+ES Sbjct: 61 KLRVCTVLTADG----EQQIVCGAPNARTGITVVVASPGTYVPGIDVTIQVGKIRGVESH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-----DPIIDVSLTPNRSDCIG 170 GMMCSE+EL LSD+ I+ELP VG D+L + DP+I++++TPNR D + Sbjct: 117 GMMCSERELELSDEHDGIIELP-SGEVGQEFVDWLAENQPAKVDPVIEIAITPNRPDALA 175 Query: 171 VRGIALDLVAAGLGKLKEIN---ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 VRG+A DL A GLG L+ + I+ ++++ LDD+ + FA ++GV+N Sbjct: 176 VRGVARDLAARGLGTLRARDVQAIAPSFATDATIAIAADTLDDAPV---FAGQVLRGVKN 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P W++ RL+A+GLR IS LVD+TN+ S D P HVFD ++ + VRRA +GE++ Sbjct: 233 GPSPVWLQDRLRAIGLRPISFLVDVTNFFSYDLCRPLHVFDLDKVKGTVQVRRARAGEEL 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LALD + Y L+ V++A D S+ GI+GG+ G D T +VLVE A W PI IA +G Sbjct: 293 LALDGKTYALAEGQVIVADDEGPISVGGIMGGERTGVSDETVNVLVESAWWQPIQIAMTG 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L I +D+RYRFERGVD +P L V +I + GG AS + +A + R Sbjct: 353 RALKINSDARYRFERGVDPAFTLPGLDQAVRMIADIAGGEASQVIVAGAVPDVARAYRLD 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V+ L G+++ E L+ LGF + G+ SVPSWR DV +ADLVEE+ RI Sbjct: 413 TDRVQSLVGMEIAPETQRATLQALGFVLDGDM----ASVPSWRPDVLGEADLVEEVARIA 468 Query: 468 GVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P+P Q K L+ Q R +R +AS E V +SFI ++ + LFGG Sbjct: 469 SLTKLVGVPMPRMQAGVPKPILTPLQRRLGTARRTVASLGYNECVTYSFIDQKSASLFGG 528 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G + NPISAD+S++R LLPGLL+A RN R AD A+FE HV+ P Q Sbjct: 529 GDDASMLENPISADLSHLRPDLLPGLLRAAARNQARGFADLALFEAGHVFSGGEPGDQVL 588 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 G+ GR + R VDLFDAKAD +V+ + ++ Sbjct: 589 HVTGLL--------VGRTAPRDVHKAARAVDLFDAKADIEAVLAAVGAPARVQIMRNGAD 640 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 W+HPGR G I + V+G FGE HP +L + P F ++L+ +P+ K + Sbjct: 641 WWHPGRHGTICLGPKKVIGTFGELHPRLLKEMDIQGPAVAFTIFLEEVPLP-KSTNAARP 699 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 + L+ L P+ RD AF+V + A T++N D+ +I D VFD F G +L EG KS+ Sbjct: 700 ALVLNDLQPISRDFAFVVPNAVEALTMINAALGADKAMIVDARVFDEFAGGNLPEGHKSL 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ V IQP T ++ +I L ++VE V K T AVLR Sbjct: 760 ALSVRIQPQGATLKEAEIEALSAKVVEKVAKATGAVLRG 798 >gi|296532254|ref|ZP_06894998.1| phenylalanyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] gi|296267424|gb|EFH13305.1| phenylalanyl-tRNA synthetase beta subunit [Roseomonas cervicalis ATCC 49957] Length = 822 Score = 573 bits (1477), Expect = e-161, Method: Compositional matrix adjust. Identities = 326/837 (38%), Positives = 492/837 (58%), Gaps = 49/837 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF++SWLK HL+T+ SL++I L +IGLEVE V++R AL+PF I V+ ++P+ D Sbjct: 1 MKFSVSWLKQHLETEASLDQITAALNTIGLEVEGVEDRGAALAPFRIAHVIEAVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++D G VVCGAPN R G+ V PG+ +P N M++ V +IRG++S GMM Sbjct: 61 RLRACKVDVGDGVIRSVVCGAPNARTGMKAVLGLPGAVVPVNGMVLKVGEIRGVKSEGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L DD I++LP DAPVG + + L + ++++S+TPNR D + +RGIA DL Sbjct: 121 CSARELGLGDDHEGILDLPEDAPVGEVYARWAGLDEAVVEISVTPNRGDALSIRGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESI-PLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG LK P E + P +++ L D+ C V+GVRN +P W++ R Sbjct: 181 AAAGLGTLKPF---APAKVEGVYPSPLRWVLQDAESCPWVVGRAVRGVRNGPSPKWLQDR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYD 296 L ++GLR I+ALVDITN+ + D G P HVFD +++ L +RR GE LAL+ +E Sbjct: 238 LASIGLRPINALVDITNFFTYDLGRPLHVFDVAKVKGSELFLRRGRDGESFLALNGKEVA 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 ++P+++VIA ++S+AGI+GG+H+G D+ T +V +E AL+DP+ IA SG+ + +D+ Sbjct: 298 VTPEDLVIADSEAVESLAGIMGGEHSGSDEATREVFIECALFDPVRIALSGRRHDLRSDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 R RFERG+D + L ++++ LCGG S++ A R+ + + L G Sbjct: 358 RARFERGIDPALLPAALDAATAMVIELCGGEPSEVTEAGAEPAWQRQASLRFARIAGLGG 417 Query: 417 IDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQD----------------------- 452 D+ ++++ ILERLGF V+ + + VSVPSWR D Sbjct: 418 SDLSADEAVAILERLGFGVVARDAEAVTVSVPSWRNDIAAPGALAQGPGLSPERAQAAAE 477 Query: 453 ----VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +E + DL+EE+LRI G+D+I LP+ + L+ +Q+R +RV+A+R M+ Sbjct: 478 GCAVIEPECDLLEEVLRIPGLDRIPPVSLPVASPVPRPALTPKQARASLARRVMAARGML 537 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + V++ F+ + FG L + NPI+AD+ MR + L L +A RN R D A Sbjct: 538 DCVSFGFLDSTTAARFGETPAMLRLDNPIAADLDQMRPTPLASLAQAAARNAARGYPDVA 597 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 + E+ Y + +PEGQ +AAG+R G + R W+ + R VD DAK DAL+V Sbjct: 598 LSELGGAYRDASPEGQLAVAAGLRLGQ-----TPRHWAAPA----RAVDAMDAKGDALAV 648 Query: 629 IEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + V + +L + AP YHPGRSG+++ + VL YFGE HP + + GL+ GF Sbjct: 649 LAALGVPMAALTVTADAPGHYHPGRSGVVRQGPKTVLAYFGELHPKLREELGLAGAAAGF 708 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDD 746 EV+LD++P ++K+ K V L + P+KRD AF+VD +PA LV + +R LI D Sbjct: 709 EVFLDAVPEPKRKK---KAVPDLPAFQPLKRDFAFLVDAGVPAENLVRAARGAERALIVD 765 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FD + G+ L EGK S+A++V +QP + + D +I + +IV V K T A LR Sbjct: 766 VALFDRYAGEKLPEGKVSLALEVTLQPREASLTDAEIEAVGAKIVAAVAKATGATLR 822 >gi|254467382|ref|ZP_05080793.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] gi|206688290|gb|EDZ48772.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium Y4I] Length = 798 Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust. Identities = 341/816 (41%), Positives = 480/816 (58%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD S+E+I + LT +GLEVE V N +AL FT+ V E++PD D Sbjct: 1 MKFTLSWLKDHLDTDASVEEITEALTDLGLEVEGVVNPADALKDFTLGYVKHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT E+Q++CGAPN R G+ V PG +P ++ + V KIRGIES GMM Sbjct: 61 KLRVCKVDT-DEGELQIICGAPNAREGITVVVCKPGMYVPGLDITIGVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP A VG + D+L +DP +I++++TPNR D +GV G Sbjct: 120 ASERELELSEEHDGIIELPSGA-VGDKFVDWLAENDPAKVDPVIEIAITPNRPDALGVYG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK P+++ D D C FA +KGV+N +P W Sbjct: 179 IARDLAARGLGTLKTRAFEAIPGDFDSPIKVTIDEDTLDGCPLFAGRVIKGVKNGPSPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ RL A+GLR ISALVD+TN+ + D+ P HVFDA+++ L V RA GE ++ALD + Sbjct: 239 LQDRLTAIGLRPISALVDVTNFFTFDQNRPLHVFDAAKVQGNLRVHRAQGGETLVALDEK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY L ++VI+ + ++SI GI+GG GC ++T DV +E A WD + IA +G+ L I Sbjct: 299 EYTLGAGHMVISDENGVESIGGIMGGAETGCTEDTVDVFLESAFWDHVQIAMAGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD + I L +IL +CGG S++ IA ++ R + V+ Sbjct: 359 SDARYRFERGVDPEYTIEGLHRATQMILDICGGEPSEMVIAGDVPDHSRAYKLDSGRVQS 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++P D + L RLGF + G VPSWR DV+ +ADLVEE+ RI + +++ Sbjct: 419 LVGMEIPESDQRQTLTRLGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKLQ 474 Query: 474 SEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 +PLP LT K ++ QQ R + +R AS E+V++SFI K + LFGGG Sbjct: 475 GKPLPRLTDGIPKPVMTPQQRRQQMARRTCASLGYNEIVSYSFIDKASAALFGGGDDATM 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI- 591 + NPIS++MS+MR LL GLL+A RN R D A+FE + P Q AG+ Sbjct: 535 LANPISSEMSHMRPDLLAGLLQAAARNQARGFMDLALFEAGPAFTGGEPGEQVNQIAGLL 594 Query: 592 --RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 R G + G+ R VDL+DAKADA +V+ + ++ +W+H Sbjct: 595 VGRTGPKDVHGA-----------SRAVDLYDAKADAEAVLAAIGAPAKVQVLRDGAAWWH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR G I + +LG FGE HP +L G+ F ++ D +P+ +K T+ + Sbjct: 644 PGRHGRICLGPKKILGVFGELHPKVLKQMGIKGAAVAFTIFPDEVPLP-RKSGATRPALA 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S L V+RD AF+VD + A TLVN D+ LI+DV VFD F G SLGEGKKS+AI Sbjct: 703 ISDLQAVERDFAFVVDADVEALTLVNAAAGADKALIEDVRVFDEFIGGSLGEGKKSLAIT 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T ++ DI + ++I+ V K T LR Sbjct: 763 VRLQPSDQTLKEKDIEAVSEKIIAKVTKATGGTLRG 798 >gi|89069793|ref|ZP_01157128.1| phenylalanyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] gi|89044594|gb|EAR50710.1| phenylalanyl-tRNA synthetase beta subunit [Oceanicola granulosus HTCC2516] Length = 799 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 331/820 (40%), Positives = 471/820 (57%), Gaps = 37/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ L+ I DTLT +GLEVE V+N L+ FTI KVL+ E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEADLDTILDTLTDLGLEVEGVENPAGRLADFTIGKVLTAEKHPEAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D G E+Q++CGAPN R G+ V A PG +P + + V KIRGIES Sbjct: 61 RLKVCQVA-TDAG---ELQIICGAPNARAGITVVIARPGVYVPGIDTTIGVGKIRGIESH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIG 170 GMMCSE+E+ LSD+ I+ELP VG R +D+L +DP +I++++TPNR D +G Sbjct: 117 GMMCSEREMELSDEHDGIIELP-SGEVGERFTDWLAANDPGKVDPVIEIAITPNRGDALG 175 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V GIA DL A GLG LK + + S P+ + D D + F ++GV+N + Sbjct: 176 VHGIARDLAARGLGTLKPLTLERVPESFPSPVSVTIDDDTRAQAPVFFGRYIRGVKNGPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ RL+A+GLR IS LVD+TN+ + D P HVFDA ++ L V RA GE + A Sbjct: 236 PQWLQDRLRAIGLRPISFLVDVTNFFTHDMNRPLHVFDADQLKGGTLRVHRAEGGETLEA 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD++ Y P +I+ ++SIAG++GG GC D T +V VE A++DP+ A +G+ Sbjct: 296 LDHKVYSFEPGMTLISDAEGVESIAGVMGGARTGCTDETVNVFVEAAVFDPVRTAYTGRA 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L I +D+RYRFERG+D ++H V +I+ + GG AS++ A + + R Sbjct: 356 LKIHSDARYRFERGIDPAFTPEGMEHAVRMIVDIAGGEASEVVQAGEVPHWRRGYRLDTD 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V+ L G+D+P + LERLGF++ G+ P WR D+ +ADLVEE+ RI + Sbjct: 416 RVQSLVGMDIPAAEQRATLERLGFTLEGDM----AYAPPWRTDILGEADLVEEVARIASL 471 Query: 470 DQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++ +PL T K L+ Q R + +R A+ E V +SFI + + LFGGG Sbjct: 472 TRLVGKPLARTVPGVPKPILTPGQKRQQIGRRTAAALGYDECVTYSFIDQAAAALFGGGT 531 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + NPIS++MS+MR SLLP L A RN R AD ++FEV V+ PE Q Sbjct: 532 DATRLENPISSEMSHMRPSLLPSLAAAAARNQARGFADLSLFEVGQVWAGGEPEDQGIEI 591 Query: 589 AGIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 AG+R G +G + G+ R VDLFD KADA +++ + ++ G Sbjct: 592 AGLRVGRTGPKDVHGT-----------ARAVDLFDVKADAEAILSAIGAPAKVQVLRGGE 640 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 W+HPGR G I + VLG FGE HP +L L P F ++ + +P+ +K + Sbjct: 641 GWWHPGRHGRICLGPKKVLGVFGELHPRVLKAMDLKGPAVAFVIWPEQVPLP-RKAALAR 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKS 764 + + L V+RD AF+VD + LVN D+ LID+V +FD F G S+GEGKKS Sbjct: 700 PALAATDLQAVERDFAFVVDADTASLDLVNAAAGADKALIDEVRLFDEFVGGSVGEGKKS 759 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +AI V +QP + T + +I + +IV+ V K T VLR Sbjct: 760 LAITVRLQPSEATLTEAEIEAVAAKIVDKVTKATGGVLRG 799 >gi|87198713|ref|YP_495970.1| phenylalanyl-tRNA synthetase subunit beta [Novosphingobium aromaticivorans DSM 12444] gi|93140706|sp|Q2GAI7|SYFB_NOVAD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|87134394|gb|ABD25136.1| phenylalanyl-tRNA synthetase beta subunit [Novosphingobium aromaticivorans DSM 12444] Length = 796 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 329/817 (40%), Positives = 467/817 (57%), Gaps = 36/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWLK LDT + I + LTS+GLE+E V D AL F + +VL+ E++P D Sbjct: 1 MKFSFSWLKSVLDTKADAKLIAEKLTSLGLEIESVEDASAALKSFRVARVLTAEKHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G +QVVCGAPN R GL+GV PG+ +P N M + IRG+ES GMM Sbjct: 61 KLQVLSVDLGDGNPLQVVCGAPNARAGLVGVLGLPGAVVPANGMELRKSAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L ++ I+ELP DAP+G +DYL SDP+ DV++TPNR DC+GV GIA DL Sbjct: 121 CSTRELGLGEEHDGIIELPGDAPLGTTFADYLG-SDPVFDVAITPNRPDCMGVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK I S P+E++ DD C F ++GVRN +P W++ L Sbjct: 180 AAAGLGVLKPIAAQSVAGSFPCPVEVR--TDDPEGCPAFYGRVIRGVRNGPSPKWLQDYL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 K+ G R ISALVDITNYV L G P+H +D +++S + R+A GE LAL+ +EY L Sbjct: 238 KSAGQRPISALVDITNYVMLGYGRPAHAYDVAKLSGAVVARKAREGETCLALNGKEYGLQ 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA D + IAGI+GG+H+GC D TTDVL+EVA + P NIAR+G+ L + +D+R Sbjct: 298 PWMTVIADDAGVHDIAGIMGGEHSGCSDETTDVLLEVAYFTPANIARTGQALALTSDARG 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L + SLIL +CGG AS++ A + + + L GID Sbjct: 358 RFERGVDPAFLDTGLDLLTSLILEICGGEASEVVRAGEPPLARKALAYDPDLAGNLGGID 417 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V + RIL LGF V D + V+VP+WR DV D+VEE++R++G+D + S PLP Sbjct: 418 VAAAEQKRILGALGFDVA---DDWTVAVPTWRPDVAGPPDIVEEVIRVHGLDAVPSTPLP 474 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 K + Q R V+R ASR + E V WSF+ + ++ F G+ + NPIS Sbjct: 475 RADGVAKPTATPAQMLERRVRRAAASRGLHEAVTWSFLPEAEAARFADGEALWSLANPIS 534 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG- 597 D+ MR SLLPGLL A RN+ R +FE+ G++Y+ +G+ G Sbjct: 535 EDLKVMRPSLLPGLLSAAQRNLHRGATSIRLFEI----------GRRYL-----RGAGGA 579 Query: 598 ---------IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSW 647 + R+ + + + D FDAKA+AL+++ + +D+L+ A Sbjct: 580 SDEKLSLAVVLAGDRIARGWASGKAQPFDAFDAKAEALALLAEAGAPVDNLQVMGEAGPQ 639 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPG+S ++ + VL FG HP F L P+ E++LD IP + + Sbjct: 640 FHPGQSATLRLGPKQVLARFGMLHPATARAFDLDGPVAVVELFLDRIPAKKGAGQFARPH 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 +L V RD AF+VD +PAG L+ +K D+ I VFD F+G+ + EG+KS+A Sbjct: 700 YAPPALQAVTRDFAFLVDASVPAGDLLRAVKGADKQAIVAARVFDDFRGQGVAEGQKSLA 759 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I+V +QP+ +F + ++ + D++V K A LR Sbjct: 760 IEVTLQPVDKSFDEAALKAIADKVVA-AAGKLGAELR 795 >gi|326386440|ref|ZP_08208063.1| phenylalanyl-tRNA synthetase subunit beta [Novosphingobium nitrogenifigens DSM 19370] gi|326209101|gb|EGD59895.1| phenylalanyl-tRNA synthetase subunit beta [Novosphingobium nitrogenifigens DSM 19370] Length = 799 Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust. Identities = 327/816 (40%), Positives = 471/816 (57%), Gaps = 29/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF LSWLK LDTD I L +GLE+E V D AL+ F + +VL+ +++P D Sbjct: 1 MKFALSWLKAFLDTDADAATIARALNGLGLEIESVTDVAAALTKFRVARVLTADKHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G +QVVCGAPN R GL+GV PG+ +P N M + IRG+ES GMM Sbjct: 61 KLQVLSVDLGDGNPLQVVCGAPNARAGLIGVLGLPGAVVPANGMELRKSAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L ++ I+ELP DA G +DYL SDP+ DV++TPNR DC+GV GIA DL Sbjct: 121 CSTRELGLGEEHDGIIELPADATPGVSYADYLG-SDPVFDVAITPNRPDCMGVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+G+LK I + S P+EI+ +D+ C F ++GV+N +P W++ L Sbjct: 180 AAAGIGRLKPIATTPVEGSYPCPVEIR--TEDAEGCPAFFGRVIRGVKNGPSPQWLQDAL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 K+ G R ISALVDITNYV L G P+H +D + +S + R+A GEK+LAL+ +EY L Sbjct: 238 KSAGQRPISALVDITNYVMLGYGRPAHAYDLATLSGAVVARKARDGEKVLALNGREYALE 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA D + IAGI+GG+H+GC + TTDVL+EVA +DP IAR+G+ L + +D+R Sbjct: 298 PWMTVIADDAGVHDIAGIMGGEHSGCSETTTDVLLEVAYFDPAGIARTGQALALTSDARG 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L + LIL +CGG AS + A + + + + RL G+D Sbjct: 358 RFERGVDTGFLDTGLDLLTGLILDICGGEASHVVRAGKAPVADKVVDYAPTLAARLGGVD 417 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 +P ++ RIL LGF+V GE ++V+VP WR D++ D+VEE++R++G+D + S PLP Sbjct: 418 LPDDEQRRILAALGFAVSGE-GVWKVAVPGWRPDIDGAPDIVEEVIRVHGLDAVPSTPLP 476 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL-NPI 537 K + QS R ++R A+R E V WSF+ + ++ F G +L NPI Sbjct: 477 RAAGVAKPTATAAQSLERRLRRAAAARGAHEAVTWSFLPEAEAARFADGADAPWVLANPI 536 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-------ENDTPEGQKYMAAG 590 S D+ MR SLLPGLL A RN+DR +FE+ Y N+ P +A Sbjct: 537 SEDLKAMRPSLLPGLLSAARRNLDRGATSVRLFEIGRRYLRGEGGASNEAPSLAVVLAG- 595 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYH 649 E S R W+ + D FDAKA+AL+++ + +D+L+ A +H Sbjct: 596 --------ERSARGWATG---KAVAFDAFDAKAEALALLAEAGAPVDNLQVMGEAGPQFH 644 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S ++ + VL FG HP+ L F LS P+ E++L+ +P + T + Sbjct: 645 PGQSATLRLGPKTVLARFGMLHPSTLKAFDLSAPVAVVELFLERLPGKKGASTFARAPYA 704 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQ 768 L V RD AF+V PAG +V ++ D+ I V VFD F+G+ + EG +S+A++ Sbjct: 705 PPVLQGVTRDFAFLVPTDRPAGDVVRSVRGADKANIVAVRVFDDFRGQGVAEGMRSLALE 764 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP+ ++ + ++ + DRIV K A LR Sbjct: 765 VTLQPVDKSYDEAALKAISDRIVA-AAAKVGATLRG 799 >gi|307293509|ref|ZP_07573353.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] gi|306879660|gb|EFN10877.1| phenylalanyl-tRNA synthetase, beta subunit [Sphingobium chlorophenolicum L-1] Length = 813 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 333/831 (40%), Positives = 477/831 (57%), Gaps = 45/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTL+WLK HL TD L I LT+IGLEVE V+N E L F I KVL+ + +P D Sbjct: 1 MKFTLNWLKTHLKTDADLPTILKGLTNIGLEVEGVENPAEKLGAFRIAKVLTADPHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G +QVVCGAPN R GL+GV+ G+ +P N M++ IRG+ES GMM Sbjct: 61 KLQVLTVDAGDGA-LQVVCGAPNARAGLVGVFGTEGAVVPVNGMVLKKTAIRGVESNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D I+EL DAPVG + + L DP+IDVS+TPNR DC+GVRGIA DL Sbjct: 120 CSFRELELGEDHDGIIELSADAPVGQVYAAWAGLDDPVIDVSITPNRQDCMGVRGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG L I + + E + DD+ C F VKGV+N +P WM +RL Sbjct: 180 AAAGLGTLNAIVVP---TVEGVGPGPDVRTDDADGCPAFFARTVKGVKNGASPEWMAKRL 236 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+G + IS LVDITNY+ +D G P HV+D + + L R+ GE++LAL+ + Y + Sbjct: 237 KAIGQKPISTLVDITNYIMIDLGRPLHVYDMATLKGPLVARKGRPGEQVLALNGKTYTVD 296 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D + I GI+GG+H+G D TTDVL+E A + P IA +G+ L + +D+R Sbjct: 297 ETMTVIADDEAVHDIGGIMGGEHSGAQDGTTDVLIECAYFTPERIAVTGQKLALTSDARG 356 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L L+ LCGGTAS+ A + + + ++ L+G+D Sbjct: 357 RFERGVDPAFLDDGLSIATYLVTELCGGTASEATYAGAPPVAVKTVTYDPAQCLALAGVD 416 Query: 419 VPIEDSLRILERLGFSVIGEYDKFE--------------VSVPSWRQDVEEKADLVEEIL 464 V + RILE LGF+V G FE VSVPSWR+DV++ D+VEE++ Sbjct: 417 VTDSEQKRILESLGFAVHGNDATFEYQDGVPVTTPANWTVSVPSWRRDVDDWPDIVEEVV 476 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RI G+DQ+ S PLP + + +Q R V+R A+R + E +NWSF+S++++ Sbjct: 477 RIVGLDQVPSTPLPRAPGVARPTATAEQLIERRVRRTAAARGLAEAINWSFLSEKEAASV 536 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG- 583 GGG + + NPIS D+ MR SLLPGLL AT RN+DR +FE+ Y +G Sbjct: 537 GGG--DWTLANPISEDLKVMRPSLLPGLLSATRRNMDRGATAVRLFELGRRYFAGQTDGS 594 Query: 584 -QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI----EPFVSLDSL 638 ++ + G E R W + + FDAK + ++++ P +L S Sbjct: 595 WERATVGFVLAG----EKVARGWQTG---KAQPFSAFDAKGEVIALLAAAGAPVGNLQSY 647 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF----EVYLDSI 694 S A YHPG+SG ++ ++VL FG HP++ FGLS+ + G E++LD+I Sbjct: 648 GEASIA---YHPGQSGTLRLGPKVVLAEFGVLHPSLAKQFGLSSSLAGTVVAGEIFLDAI 704 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 P +++ + +L VKRD AF++DQ + A LV +K D + I D +FDVF Sbjct: 705 P-AKRANGFMRAPYAPPALQAVKRDFAFVIDQAVDADALVRAVKGADKKAIVDAQLFDVF 763 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G + EGKKS+AI++ +QP + +F +++ + +V+ +K +LR+ Sbjct: 764 VGPGVEEGKKSLAIEITLQPGEKSFSQEELDAISAAVVK-AAEKLGGMLRA 813 >gi|254453779|ref|ZP_05067216.1| phenylalanyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] gi|198268185|gb|EDY92455.1| phenylalanyl-tRNA synthetase, beta subunit [Octadecabacter antarcticus 238] Length = 799 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 332/819 (40%), Positives = 474/819 (57%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD S+++IC+TLT +GLEVE V+N A LS F I KV E++PD D Sbjct: 1 MKFTLSWLKSHLDTDASVDEICETLTDLGLEVEGVENPAAKLSDFVIGKVTHAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + Q++CGAPN R G+ V A PG+ IP ++ + V KIRGIES GMM Sbjct: 61 KLKVCTVEAG-YGPTQIICGAPNARAGITVVVAKPGTYIPGLDITIAVGKIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP +G +DYL DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSEEHDGIIELPA-GEIGQSFADYLAEHDPARVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A DL A GLG +K ++ +S + P+ + D D + F +KGV+N +P+W Sbjct: 179 VARDLAARGLGVMKPNDVDPVAASFANPITVTIDDDTLAQAPVFYGRLIKGVKNGPSPDW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 ++Q+L+A+GLR IS LVD+TN+ + D P HVFDA +IS + L + RA E ++ LD+ Sbjct: 239 LQQQLRAIGLRPISFLVDVTNWFTYDLNRPLHVFDADKISCNSLRLHRATGTETLMGLDD 298 Query: 293 QEYDLSPDNVVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +EY L P+ + SDG+ +SI G++GG GC +TT V VE A +DPI A +G+ L Sbjct: 299 KEYTL-PEGATVISDGQGPESIGGVMGGLATGCTADTTSVFVEAAYFDPIRTAYTGRALK 357 Query: 352 IITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 I +D+RYRFERG+D P+ L+H V +I+ GG AS++ A I R Sbjct: 358 INSDARYRFERGID-PAFTPIGLEHAVRMIVDHAGGEASEVVQAGQIPDTSRAYKLDTDR 416 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L G+D+P + L LGF + G+ VPSWR DV+ ADLVEE+ RI + Sbjct: 417 CSSLVGMDIPADTQRATLTALGFVMDGDM----AQVPSWRPDVQGTADLVEEVARIASLS 472 Query: 471 QIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 +K P+P + L+ Q R +R AS E V +SFI + + LFGGG Sbjct: 473 NLKPVPMPRVRAGVPAPVLTPMQKRLAMARRTTASLGYNECVAYSFIDQAAAALFGGGTD 532 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + NPIS++MS+MR +LLPGLL+A RN R +A+ A+FE + P Q + Sbjct: 533 ATMLANPISSEMSHMRPALLPGLLQAAARNQARGMANLALFEAGDAFHGGEPGEQHTLVT 592 Query: 590 GIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 GI G + + G+ R VD++DAKADA +++ + ++ GA Sbjct: 593 GILVGKTNPKDVHGT-----------SRDVDIYDAKADAEAILSAMGAPTKVQILRGAGD 641 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +HPGR G+I + +LG FGE HP IL G+ P+ GF +Y IP+ K + + Sbjct: 642 AWHPGRHGMICLGPKKILGVFGEIHPKILTALGVKGPVVGFVLYPSDIPMP-KNASVNRG 700 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSV 765 L L V+RD AF++D + A T VN D+ LI+DV +FD F G SLG+GKKS+ Sbjct: 701 AASLPDLQAVERDFAFVMDTTVDALTAVNAAAGADKTLIEDVCIFDEFVGGSLGDGKKSL 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ V +QP T +D DI + +I++ V K T LR Sbjct: 761 AMTVRLQPSGATLKDVDIEAVSAKIIDKVTKATGGTLRG 799 >gi|114568686|ref|YP_755366.1| phenylalanyl-tRNA synthetase subunit beta [Maricaulis maris MCS10] gi|114339148|gb|ABI64428.1| phenylalanyl-tRNA synthetase beta subunit [Maricaulis maris MCS10] Length = 799 Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust. Identities = 325/815 (39%), Positives = 474/815 (58%), Gaps = 27/815 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF LSWLK HL+T+ +L++I + +T GLE+E +DN E + FT+ V E++PD D Sbjct: 1 MKFPLSWLKYHLETEATLDEIAEAMTMAGLEIEHIDNPLEKFAAFTVCHVTHAEKHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN--VRKIRGIE 113 C + +D K Q+VCGAPN R G+ ++AP G+ IP + ++ RKIRG+E Sbjct: 61 KLKVCTVETVDGTK----QIVCGAPNARTGMYAIYAPLGAYIPGLDFALDKKPRKIRGVE 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GMMCS KEL L +D I++LP VG L +DP++D +TPNR D +GVRG Sbjct: 117 SHGMMCSAKELELGEDHDGIIDLPEPFDVGTPAVVALGQADPVLDFEVTPNRPDWLGVRG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A G+G LK +I+ S P +K +LD S C +A ++GV N +P+W Sbjct: 177 IARDLAATGIGTLKTHDIA--EIPGSFPCPVKIELDWSEACPVYAGRVIRGVTNGESPDW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA-CSGEKILALDN 292 +++ +KA+GLR I+ L D+TN +S+DR P HV+D +++ + RR ++ ALDN Sbjct: 235 LKKAIKAIGLRPINFLADMTNMISVDRCRPLHVYDLAKLDGPIRARRGRGEADRFEALDN 294 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY D VIA D R GI+GG +G TTDV +E A ++P+ + K GI Sbjct: 295 KEYVPGEDQCVIADDARCLGFGGIMGGTWSGVTSETTDVFIESAWFEPLITRATAKATGI 354 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D++YRFERGVD ++ L+L CGG AS++ +A P I F +EVK Sbjct: 355 DSDAKYRFERGVDPASPRAGIEQATELVLKYCGGEASEVIVAGETPAAPADIDFPITEVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL+G+D+P + +RILE LGF GE D V VPSWR D +KADLVEE+ RI+G D++ Sbjct: 415 RLTGLDLPRAEIIRILETLGFVPSGEGDVLTVGVPSWRMDCTQKADLVEEVARIHGYDKL 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + LP V + ++ Q R R+ +R LA R E V WSF + +Q+ LFGG LE Sbjct: 475 DAVSLPRPPVRREAPATVMQLRARHARRALAGRGYSESVTWSFCNTQQAKLFGGHGDGLE 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS+++ MR + L LL A N DR D +FEV +Y +D+ +GQK +A G+R Sbjct: 535 LENPISSELDVMRPTALIHLLTALQANADRGQDDARLFEVGPIYLDDSDKGQKLVATGVR 594 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLF-DAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 + +E +GR W+ R D+F ++ +D+L+ + A W+HPG Sbjct: 595 R----VE-AGRHWAG-----TRQPDIFDAKADALAALAAAGAPVDNLQVVAEARDWWHPG 644 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT-KTKKVVHL 710 RSG+++ + V+ FGE HP +L + + FE+ LD+IP +K K + + Sbjct: 645 RSGVLRLGPKNVMAEFGEIHPAVLKALDIDGRVLAFEIVLDAIPQPKKASGLKARTPLER 704 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 + L PV RD AF+ D+ + A TLV K D+ +I +V+VFDV+ GK + EG+ S+AI+V Sbjct: 705 ADLTPVTRDFAFLADKSVAADTLVRAAKGADKQMITNVSVFDVYDGKGVPEGQVSLAIEV 764 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP T + +I + IV V K T A LRS Sbjct: 765 TLQPRDKTLTEKEIEAIAAGIVAKVEKATGASLRS 799 >gi|85709655|ref|ZP_01040720.1| phenylalanyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] gi|85688365|gb|EAQ28369.1| phenylalanyl-tRNA synthetase beta subunit [Erythrobacter sp. NAP1] Length = 799 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 318/806 (39%), Positives = 464/806 (57%), Gaps = 24/806 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+++WLKDHL+T+ SL++I DTL +IGLEVE V D E L+ F + KVL+ E++PD D Sbjct: 1 MKFSITWLKDHLETEASLQEITDTLNAIGLEVEGVEDPSETLAGFKVAKVLTAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG+ +QVVCGAPN R G+ GV PG+ +P N M + IRG+ES GMM Sbjct: 61 KLQVLTVDTGEGDPLQVVCGAPNARAGMKGVLGLPGAVVPANGMELRKSAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L D+ I+ELP DA V +DY + S PIIDV++TPNR DC+GV GIA DL Sbjct: 121 CSVRELELGDEHDGIIELPEDASVAHSFADY-QGSSPIIDVAITPNRPDCMGVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK I +S P+EI+ DD C F +KGV N +P+W++QRL Sbjct: 180 AAAGLGTLKPIAFPEFAASGDCPVEIR--TDDPEGCPAFYGRVIKGVTNGPSPDWLQQRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 K+ G R IS LVD+TNY+ L G P+HV+D +++S + RRA GE++LAL+ + Y L Sbjct: 238 KSAGQRPISLLVDLTNYLMLAFGRPAHVYDLAKLSGAVVARRAKDGEQVLALNEKTYTLD 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VVIA D + IAGI+GG+++G D TTDVL+E+A +DP I +G+ LG+ +D+R Sbjct: 298 ESMVVIADDNEVHDIAGIMGGENSGVQDETTDVLLEIAYFDPPRIGVTGRKLGLASDART 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L + LI+ L GG+AS+ A P+ ++F +L G+D Sbjct: 358 RFERGVDPAFLEDGLDLLTGLIVELAGGSASEAVQAGVPPMAPKVVLFDTDLTAKLGGVD 417 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP ++ R LE L F+V ++ V+ P R D+E ADLVEE++RI+G+D+++S LP Sbjct: 418 VPADEQRRTLESLDFTVDSNWN---VTCPLRRHDIEGPADLVEEVVRIHGLDKVESVALP 474 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + QQ R ++R A + E V WSF+ ++ + F ++ NPIS Sbjct: 475 RMDGVARPTATPQQQMERKLRRAAAGSGLDEAVTWSFLPEDAAAHFTATDDLWKLDNPIS 534 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 DM MR SL+PGLL A RN DR +FE+ Y G+ M+ + + G+ Sbjct: 535 EDMKVMRPSLIPGLLIAAKRNADRGAGASRLFELGRRYFR----GKNGMSD--ERATLGV 588 Query: 599 EGSG----RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 +G R W+ S + + A + D L A +HPG+S Sbjct: 589 VLTGEKVQRGWA--SGKAAMYDAYDAKAAALSLLEAAGAPADKLMVMGEAGDQFHPGQSA 646 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR---TKTKKVVHLS 711 ++ + VL FG HP L F + P+ E++LD+IP + + + + Sbjct: 647 TVRLGPKNVLARFGMLHPATLKAFDMDGPVAAVELFLDAIPAKKAPKGPVSFARPGFTPP 706 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVL 770 +L V RD AF+V + A L+ ++ D+ I VFD+F G+ + EGKKS+AI+V Sbjct: 707 ALQAVTRDFAFLVPADLAAEDLLKAVRGSDKTNITAARVFDLFTGEGVPEGKKSLAIEVT 766 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVK 796 +QP +++D D++ + D +V K Sbjct: 767 LQPQDKSYKDKDLKAIADNVVAAAAK 792 >gi|209545210|ref|YP_002277439.1| phenylalanyl-tRNA synthetase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|209532887|gb|ACI52824.1| phenylalanyl-tRNA synthetase, beta subunit [Gluconacetobacter diazotrophicus PAl 5] Length = 820 Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust. Identities = 325/839 (38%), Positives = 474/839 (56%), Gaps = 54/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWL+DHLDT + ++IC L +IGLEVE V D AL+PF +++ ++P+ D Sbjct: 1 MKFTLSWLRDHLDTTATTDEICAKLNTIGLEVEGVEDPGAALAPFRTARIVEAVQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+D G +QVVCGAPN R GL ++APPG+ IP ++ + IRG S GM Sbjct: 61 RLRVCRVDAGPGFDPVQVVCGAPNARTGLSVIFAPPGTYIPGLDITIKAGAIRGETSGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L + I ELP G +D+ L DP+I++++TPNR D + VRGIA D Sbjct: 121 LCSLRELGLGEAHDGIAELPDGTAPGQSYADFAGLDDPVIEIAVTPNRGDALAVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAG+G L+ + PL D ++ C ++GVRN +P W++ R Sbjct: 181 LAAAGIGHLRPWLAETVEGTFDSPLAWANDFPEA--CPWVLGRAIRGVRNGPSPEWLQNR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L+A+GLR ISALVDITN+ + D G P HVFD R++ D LT+ R +GE ALD ++ Sbjct: 239 LRAIGLRPISALVDITNFFAFDLGRPLHVFDVDRVTGDRLTICRG-AGETFRALDGRDVV 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +SP++ VIA +QS+AGI+GG+ G + TT V VE AL+DP+ IA SG+ LG+ +D+ Sbjct: 298 VSPEDCVIADAAGVQSLAGIMGGEGTGVTEATTTVFVECALFDPVRIALSGRRLGLHSDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 R+RFERGVD + L+ +I+ LCGG AS++ A R+ + + L G Sbjct: 358 RHRFERGVDQALPVAALEAATRMIVDLCGGEASEVVSAGTPPAWQREARLRFARIAGLGG 417 Query: 417 IDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQD----------------------- 452 +DVP + + LE LGF+V + + D V VPSWR D Sbjct: 418 VDVPPDAVVASLEALGFAVRMRDEDGVVVDVPSWRNDVAMPMVLDQGPDLSPERARIAAE 477 Query: 453 ----VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 V+ + DL+EEILR+ G+D I LP L +Q R +RVLA+R M+ Sbjct: 478 GAIAVDSECDLIEEILRLRGLDSIPPVSLPALSAVPLPALVPRQVRAATARRVLAARGML 537 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E V +SF + S FG L +LNPI+AD+ MR + + LL A RN R D Sbjct: 538 ETVGYSFAAHGASAQFGAVPESLRLLNPIAADLDQMRPTPMVNLLSAVERNSVRGYPDLG 597 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLFDAKADALS 627 +FEV + D GQ +AAG+R G + + G G +D V L+D KADA++ Sbjct: 598 LFEVGPGFSAD---GQTLIAAGLRSGHAPRVPGGG---ADP-------VSLWDVKADAMA 644 Query: 628 VIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 V+ ++ + + AP YHPGRSG+I+ IVLG+FG+ HP +L GL P+ G Sbjct: 645 VLAALGAPVEGVSVTADAPGHYHPGRSGVIRQGPRIVLGWFGQLHPALLAGRGLDQPVVG 704 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 FE++LD+I +++R + LS PV RD AF+V + + A +++ + +R LI Sbjct: 705 FELFLDAIAEPKRRRRSPPE---LSPFQPVHRDFAFLVARDVAAESVLRAARGAERTLIS 761 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +FDV++G + EG KS+ ++V +QP+ + D +I + D++V V + A LR Sbjct: 762 AVRLFDVYEGDKVPEGHKSLGVEVTLQPVARSLTDAEIDAVSDKVVAAVTRACGATLRG 820 >gi|254462801|ref|ZP_05076217.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacterales bacterium HTCC2083] gi|206679390|gb|EDZ43877.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodobacteraceae bacterium HTCC2083] Length = 798 Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust. Identities = 331/817 (40%), Positives = 473/817 (57%), Gaps = 32/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+T+ +L++I LT +GLEVE+V N + L F + KV S E++PD D Sbjct: 1 MKFTLSWLKKHLETEATLDEILYALTDLGLEVEEVSNPADKLKSFMLAKVQSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++T + + Q+VCGAPN R G+ V PG +P ++ ++V IRG+ES GMM Sbjct: 61 RLRVCQVETNEGLQ-QIVCGAPNAREGITVVLCKPGDYVPGIDVTLSVGNIRGVESHGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP VG D+L +DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSEEHDGIIELP-SGEVGELFVDWLAANDPSKVDPMIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK ++ +S + + D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGVLKTCDVEAVPASFKTDVSVAIDADTLDGCPVFCGRVIQGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+ L+A+GLR IS LVD+TNY + D+ P HVFD ++ L V RA GE I+ALD++ Sbjct: 239 MQDALRAIGLRPISFLVDVTNYFTYDQNRPLHVFDMDKVKGNLRVHRAKGGETIVALDDK 298 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY L + I+ D ++SIAG++GG +GC D T +V VE A WDPI IA +G+ L I Sbjct: 299 EYTLQAGQMAISDDNSVESIAGVMGGLESGCTDETVNVFVESAYWDPIQIAYTGRALKIN 358 Query: 354 TDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERGVD PV L+H V +I+ GG AS + A N+ R Sbjct: 359 SDARYRFERGVD-HAFTPVGLEHAVRMIVDHAGGEASQLIQAGNVPDVSRSYKLDTDRCS 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+++ + IL LGF + G+ SVPSWR DV+ +ADLVEE+ RI + + Sbjct: 418 SLVGMEIAADRQREILTSLGFVMDGDM----ASVPSWRPDVQGEADLVEEVARIESLTGL 473 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +PLP L + LS Q R R +R A E V +SFI + + LFGGG Sbjct: 474 VGKPLPRLHDGVTRAILSDAQLRERSARRTAAVLGYNECVTYSFIDQPSAALFGGGDDAT 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS+MR LLPGLL+A RN R + D A+FEV + P Q +G+ Sbjct: 534 MLANPISSEMSHMRPQLLPGLLQAAARNQARGLMDQALFEVGTAFHGGEPGEQHVQVSGL 593 Query: 592 ---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 R G + G+ R VD+FD KADA +++ + ++ GA +W+ Sbjct: 594 IVGRTGPKDVHGA-----------SRGVDVFDVKADAEAILAAIGAPVKVQILRGADAWW 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + V+ FGE HP +L + P GF ++ +P+ KK++ T+ + Sbjct: 643 HPGRHGKICLGPKKVMAVFGEIHPKVLAAMDVKGPAMGFTIWPTEVPLP-KKKSSTRAPL 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 L L V+RD AF+VD + A TLVN D+ LI+ V VFD F G +LGEGKKS+A+ Sbjct: 702 VLRDLQAVERDFAFVVDADVEALTLVNAAVGADKALIETVRVFDEFIGGALGEGKKSIAV 761 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP++ T ++ +I + +I+E V K T +LR Sbjct: 762 TVRLQPVEATLKEAEIEAVGTKIIEKVGKATGGILRG 798 >gi|304320476|ref|YP_003854119.1| phenylalanyl-tRNA synthetase subunit beta [Parvularcula bermudensis HTCC2503] gi|303299378|gb|ADM08977.1| phenylalanyl-tRNA synthetase, beta subunit [Parvularcula bermudensis HTCC2503] Length = 791 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 322/806 (39%), Positives = 466/806 (57%), Gaps = 19/806 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HL+TD S+++I D + IGLEVE + N +ALS ++ +L ER+PD D Sbjct: 1 MKFTLSWLKRHLETDASIDEIADMMVRIGLEVEDISNPADALSAMSVGHILRAERHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + K E Q+VCGAPN R L +AP G+ +P ++ + KIRG+ES GM+C Sbjct: 61 KLQVCTVATKDGEKQIVCGAPNARADLKVAYAPVGAYVPGIDVTLTKAKIRGVESFGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL +SD+ A IMELP A VG L+D L++ DP+ID +TPNR D GV G+A DL Sbjct: 121 SASELEISDEHAGIMELPAAAAVGTPLADLLDIDDPVIDFEVTPNRPDTNGVDGVARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AAGLGKL I + + P I ++DD C F ++ V+N +P W++ +LK Sbjct: 181 AAGLGKL--ITPTPVPTDGHFPCPIAIEIDDEEACPAFLGRVIRNVKNGPSPAWLQAQLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TN++S DR P HV+D S + + RR GE LALD + Y + Sbjct: 239 AIGLRPINALVDVTNFLSYDRARPLHVYDTSALMGTVRARRGREGESFLALDGKTYSVDA 298 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 D VIA D ++ + G++GG+ +GC + TT VL+E AL+DP+ AR+G+ GI++D+RYR Sbjct: 299 DMTVIADDEKVLGLGGVMGGEASGCTEETTSVLIESALFDPLITARTGRRTGIVSDARYR 358 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD G+ + V +IL +CGG SD +A ++ I F +EV+RL+G+DV Sbjct: 359 FERGVDPAGVESGMDLAVQMILEICGGEVSDPLLAGSLETAREAITFPPNEVERLTGLDV 418 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + IL LGF V +EV+ P+WR D+ KADLVEEI RI+G D + + LPL Sbjct: 419 TEGEKEDILLALGFEV-SRGGTWEVTPPTWRPDIMGKADLVEEIARIHGFDDLPT--LPL 475 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + KR L + + A +E ++W+F + + LF GG+ ++ NPIS+ Sbjct: 476 PPMPSKRQLDRPRWLETMARAGFAEAGYLETISWAFCEDQAARLF-GGETAPKLSNPISS 534 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 D+ MR S LPGLL A RN + +FEV Y D PE Q +AA ++ G+ Sbjct: 535 DLGRMRPSPLPGLLAAVQRNAAYGAREVRLFEVGAGYPGDAPEDQMLIAAAVQWGA---- 590 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKT 658 + W E +FDAKA AL ++ +D+L + P YHPGR G + Sbjct: 591 -GAKTWQRPPREPS----VFDAKALALEILGRLGAPVDNLMTFAEGPPHYHPGRKGRLSL 645 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + L +FGE HP +L +S P+ E+Y ++P S K + ++ S L P++R Sbjct: 646 GPKTTLAHFGELHPTVLKALDVSGPVIAVELYPHALPPS-KAKGPSRPARQTSKLMPLRR 704 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ I A TL+ ++ D+ LI +V +FD+++G L +KS+A+ V IQP + + Sbjct: 705 DFAFVVDKAIAADTLLKAVRGADKALISEVHLFDIYEGDGLPADRKSLAVTVTIQPKEAS 764 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLR 803 + I L +IV K A LR Sbjct: 765 LDEAAINALSAKIVAQAEKAVGATLR 790 >gi|162149041|ref|YP_001603502.1| phenylalanyl-tRNA synthetase subunit beta [Gluconacetobacter diazotrophicus PAl 5] gi|161787618|emb|CAP57214.1| Phenylalanyl-tRNA synthetase beta chain [Gluconacetobacter diazotrophicus PAl 5] Length = 820 Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust. Identities = 324/839 (38%), Positives = 473/839 (56%), Gaps = 54/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWL+DHLDT + ++IC L +IGLEVE V D AL+PF +++ ++P+ D Sbjct: 1 MKFTLSWLRDHLDTTATTDEICAKLNTIGLEVEGVEDPGAALAPFRTARIVEAVQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+D G +QVVCGAPN R GL ++APPG+ IP ++ + IRG S GM Sbjct: 61 RLRVCRVDAGPGFDPVQVVCGAPNARTGLSVIFAPPGTYIPGLDITIKAGAIRGETSGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L + I ELP G +D+ L DP+I++++TPNR D + VRGIA D Sbjct: 121 LCSLRELGLGEAHDGIAELPDGTAPGQSYADFAGLDDPVIEIAVTPNRGDALAVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAG+G L+ + PL D ++ C ++GVRN +P W++ R Sbjct: 181 LAAAGIGHLRPWLAETVEGTFDSPLAWANDFPEA--CPWVLGRAIRGVRNGPSPEWLQNR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L+A+GLR ISALVDITN+ + D G P HVFD R++ D LT+ R +GE ALD ++ Sbjct: 239 LRAIGLRPISALVDITNFFAFDLGRPLHVFDVDRVTGDRLTICRG-AGETFRALDGRDVV 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +SP++ VIA +QS+AGI+GG+ G + TT V VE AL+DP+ IA SG+ LG+ +D+ Sbjct: 298 VSPEDCVIADAAGVQSLAGIMGGEGTGVTEATTTVFVECALFDPVRIALSGRRLGLHSDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 R+RFERGVD + L+ +I+ LCGG AS++ A R+ + + L G Sbjct: 358 RHRFERGVDQALPVAALEAATRMIVDLCGGEASEVVSAGAPPAWQREARLRFARIAGLGG 417 Query: 417 IDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQD----------------------- 452 +DV + + LE LGF+V + + D V VPSWR D Sbjct: 418 VDVSPDAVVASLEALGFAVRMRDEDGVVVDVPSWRNDVAMPMVLDQGPDLSPERARIAAE 477 Query: 453 ----VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 V+ + DL+EEILR+ G+D I LP L +Q R +RVLA+R M+ Sbjct: 478 GAIAVDSECDLIEEILRLRGLDSIPPVSLPALSAVPLPALVPRQVRAATARRVLAARGML 537 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E V +SF + S FG L +LNPI+AD+ MR + + LL A RN R D Sbjct: 538 ETVGYSFAAHGASAQFGAVPESLRLLNPIAADLDQMRPTPMVNLLSAVERNSARGYPDLG 597 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLFDAKADALS 627 +FEV + D GQ +AAG+R G + + G G +D V L+D KADA++ Sbjct: 598 LFEVGPGFSAD---GQTLIAAGLRSGHAPRVPGGG---ADP-------VSLWDVKADAMA 644 Query: 628 VIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 V+ ++ + + AP YHPGRSG+I+ IVLG+FG+ HP +L GL P+ G Sbjct: 645 VLAALGAPVEGVSVTADAPGHYHPGRSGVIRQGPRIVLGWFGQLHPALLAGRGLDQPVVG 704 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 FE++LD+I +++R + LS PV RD AF+V + + A +++ + +R LI Sbjct: 705 FELFLDAIAEPKRRRRSPPE---LSPFQPVHRDFAFLVARDVAAESVLRAARGAERTLIS 761 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +FDV++G + EG KS+ ++V +QP+ + D +I + D++V V + A LR Sbjct: 762 AVRLFDVYEGDKVPEGHKSLGVEVTLQPVARSLTDAEIDAVSDKVVAAVTRACGATLRG 820 >gi|114798222|ref|YP_759165.1| phenylalanyl-tRNA synthetase subunit beta [Hyphomonas neptunium ATCC 15444] gi|114738396|gb|ABI76521.1| phenylalanyl-tRNA synthetase, beta subunit [Hyphomonas neptunium ATCC 15444] Length = 797 Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust. Identities = 312/814 (38%), Positives = 478/814 (58%), Gaps = 27/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+LSWL DHL T SL+ I D + GLEVE+V D RE L+PFT+ KV+ + +PD D Sbjct: 1 MKFSLSWLNDHLVTKASLQDILDLMLKAGLEVEEVTDPREKLAPFTVCKVIEAKPHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN--VRKIRGIE 113 C + ID K Q+VCGAPN R G+ ++AP G+ IP + ++ R IRGIE Sbjct: 61 KLRVCTVETIDGVK----QIVCGAPNARTGMTAIYAPLGTFIPGLDFALDKKPRAIRGIE 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GMMCS +EL + +D I++L VG ++ L +DP+ID +TPNR D +GV+G Sbjct: 117 SHGMMCSSRELEVGEDHDGILDLDDSLKVGTPAAEALGQTDPVIDFEVTPNRPDWLGVQG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL AAG G+ + S P++IK L+ + C FA ++GV N +P+W Sbjct: 177 IARDLAAAGAGRFLRNDPKKVNGSYDCPIDIK--LEATEACPMFAGALIRGVTNGPSPDW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+ RLKA GL+ S LVD+TNY+SLDR P HV+DA+R+S + R GE + ALD + Sbjct: 235 MQARLKAAGLQPKSLLVDVTNYISLDRARPLHVYDAARLSGAVVARLGRKGETLEALDGK 294 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y ++ D VIA + + G++GG T DV +E A +DP+ AR+G+ GI Sbjct: 295 TYPITEDMCVIADNSGAIGLGGVMGGVSTAVSAETVDVFIESAWFDPLRTARTGRATGIH 354 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYRFERGVD I L ++LIL GG S +A +I + +K+ F +V+R Sbjct: 355 SDARYRFERGVDPHSSIDGLNFAIALILEYGGGQVSKAKVAGSIPARMQKVTFYPVDVER 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L+G+ V + RIL+ L F + D + + PS R D+E+ AD+VEEI R+ G DQ+ Sbjct: 415 LTGLIVKPAEMKRILKDLEFDIEDAGDAWYLLPPSHRFDMEQSADIVEEIARLIGFDQLP 474 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + LPL + + + +Q+R +RV+A+R +E V WSF+++E + LFG + L + Sbjct: 475 TTSLPLPEGGRRVITTPRQARVAISRRVMAARGFLEAVTWSFMAREHADLFGKTEDVLAV 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP++++++ MR S L L +A R +R +FE +Y D P+ Q+ + AG+ Sbjct: 535 ANPVASELNYMRPSALGNLAQAAQRARNRGERTIRLFEAGPIYLGDGPKDQRTVIAGLV- 593 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW--YHPG 651 + + R W ++ + D A ++ +P RF+ AP+ +HPG Sbjct: 594 ----LPAAERHWQGRAAPYDAYAAKADLFALLAALGQP-----GERFQVAAPTQPHWHPG 644 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 ++ +K ++ + FG HP +L + P+ FE+ L+++P+ + K TKTK V+ + Sbjct: 645 QAASLKLGPKMTVANFGALHPGVLKTLDVEGPVYAFELNLNALPVMKVKSTKTKPVLERA 704 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 L P++RDLAF+VD + AG +V ++ ++ LI + VFDV+QG+ +GEGKKSVAI++ Sbjct: 705 ELTPIRRDLAFVVDAGVAAGDVVRHAQSAEKQLIAAIDVFDVYQGQGVGEGKKSVAIEIT 764 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QP K+ +D+ I+ +++RIV +V K T VLR Sbjct: 765 LQP-KEALKDEQIQQVIERIVASVAKGTGGVLRG 797 >gi|254488647|ref|ZP_05101852.1| phenylalanyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] gi|214045516|gb|EEB86154.1| phenylalanyl-tRNA synthetase, beta subunit [Roseobacter sp. GAI101] Length = 799 Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust. Identities = 332/817 (40%), Positives = 474/817 (58%), Gaps = 31/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT SL++I LT +GLEVE V++R A L+ FT+ V S E++PD D Sbjct: 1 MKFTLSWLKEHLDTTASLDEITYALTDLGLEVEGVEDRGAKLANFTLGYVKSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++T + + Q++CGAPN R G+ V A PG +P + + V IRGIES GMM Sbjct: 61 RLRVCQVETDEGVQ-QIICGAPNAREGITVVVAKPGVYVPGIDTTIGVGTIRGIESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP VG R D+L +DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSEEHDGIIELP-SGEVGDRFIDWLAKNDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK ++ + P+ + D D C F ++GV N +P W Sbjct: 179 IARDLAARGLGTLKPRDMPAVEGTFPCPISVSIDEDTLDQCPVFYGRVIRGVTNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 ++ +L+A+GLR IS LVD+TN+ + DR P HVFDA +++ + L V RA GE ++ LD Sbjct: 239 LQDKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKVAGNTLRVHRAKGGETLMGLDE 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY + VI+ +++SIAG++GG GC T +V VE A +DP+ A +G+ L I Sbjct: 299 KEYTFTEGMTVISDAEKVESIAGVMGGLETGCTMETVNVFVEAAYFDPVRTAYTGRALKI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERG+D + ++H +IL + GG ASD+ IA + R + V+ Sbjct: 359 NSDARYRFERGIDPEWTPYAIEHATQMILDIAGGEASDVVIAGKVPDFSRAYKLDAARVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+ + D + L LGF + G VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMTISEADQRKTLTALGFRLEGNM----AHVPSWRPDVQGEADLVEEVARIASLTKL 474 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PLP LT K LS Q R + +R A+ E V++SFI + + LFGGG E Sbjct: 475 EGRPLPRLTAGVPKPVLSPIQRRESFARRACAALGYNECVSYSFIDQASAALFGGGTDET 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS+DMS+MR +LLP LL+A RN R D A+FEV V+ P Q +G+ Sbjct: 535 RLENPISSDMSHMRPALLPALLQAAARNQARGFPDMALFEVGPVFTGGEPGEQHMQVSGL 594 Query: 592 ---RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 R G + GS R VD+FD KAD +V+ + ++ W+ Sbjct: 595 LVGRTGPKDVHGS-----------SRPVDVFDVKADVEAVLSAIGAPAKVQINRNGAEWW 643 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VL FGE HP +L + P GF ++ +P+ +K + ++ + Sbjct: 644 HPGRHGQICLGPKKVLAVFGEIHPRVLAAMDVKGPAMGFTIWPAEVPLPRKTGS-SRPAL 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 +SSL V+RD AF+VD + A TLVN D+ LIDDV VFD F G +LGEGKKS+A+ Sbjct: 703 QISSLQAVERDFAFVVDADVDAMTLVNAAMGADKALIDDVRVFDEFIGGALGEGKKSLAL 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T +D DI + +++E V K T VLR Sbjct: 763 TVRMQPSDKTLKDADIEAVGAKVIEKVTKATGGVLRG 799 >gi|241761549|ref|ZP_04759636.1| phenylalanyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373857|gb|EER63390.1| phenylalanyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 789 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 320/808 (39%), Positives = 475/808 (58%), Gaps = 23/808 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T+ S+++I DTLT IG EVE V N + L F I ++L+ ER+P D Sbjct: 1 MKFTLSWLKEHLETEASVQEIADTLTRIGHEVESVHNPADGLEAFRIARILTAERHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 IL +D G+ + +QVVCGA N R GL+GV+A PG +P ++ + + IRG+ES GMM Sbjct: 61 RLQILAVDVGESEPLQVVCGAANARAGLVGVFAAPGVYVPGIDVTLKIASIRGVESRGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L D+ I++LP +APVG ++ L DP+ DV++TP+R DC+GVRG+A DL Sbjct: 121 CSIRELGLGDEHEGILDLPHEAPVGQSYVEWAGLDDPVFDVAITPDRQDCMGVRGLARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AG+G+LK + I +++ P EI ++D C F + G++N +P WM +RL Sbjct: 181 ATAGIGRLKPLAIPRVPVTDAAPAEIT--IEDKEGCPAFFGQLIHGIQNGPSPEWMARRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+G R SALVDITNY+ D G P HV+DA I LT R+A + EKI AL+ + YDL Sbjct: 239 RAIGFRPTSALVDITNYIMFDLGRPLHVYDAGAIKGKLTARKAQNNEKIEALNGKSYDLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA D +++IAGI+G + A +TTDV++E A +DP ++++G+ LG+ +D+R Sbjct: 299 PSITVIADDQGVKNIAGIMGAEKASVSGSTTDVIIECAYFDPAAVSQAGQKLGLASDARI 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L+ ++L CGG A+ I + S V L+ +D Sbjct: 359 RFERGVDPAFLNEGLQISARMVLDFCGGKATQAVTLGEAPSAVPVISYDPSYVTSLAAMD 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ILE+LGF++ + V VPS+R+DV AD+V +I+RI G+D + S L Sbjct: 419 VAPARQREILEQLGFAIDAGW---RVRVPSFRRDVSVVADIVADIVRIEGLDNVPSTALD 475 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + Q R V+R A+ M E V WSFIS++ + +FGG +L NPIS Sbjct: 476 RGDGVARPIATHGQLTERRVRRAAAAFGMNEAVTWSFISEKDANIFGGAFWKLA--NPIS 533 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 DM MR SLLPGLL A RN DR + +FEV G++Y+ R I Sbjct: 534 EDMKVMRPSLLPGLLTAAKRNRDRGQSTIRLFEV----------GRRYLQEAERPTLGLI 583 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 R+ D + + D +DAK ++++ + ++ L+ A YHPGRSG + Sbjct: 584 FAGERMSRDWQYGKSQNFDAYDAKTAVSAMLDSVGMPVEKLQLLGDAGDVYHPGRSGRLC 643 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + L FGE HP IL F + P+ G E++LD++P+ +K + ++ S L PV Sbjct: 644 LGPKNTLAVFGEIHPAILAEFNMEGPVIGAEIFLDALPL-RKNSGQLRQPYAPSMLQPVF 702 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF++ + +PA LV I D+ I + +FDVF G+++ E +KS+ I+V++QP + Sbjct: 703 RDFAFLLPKDVPAADLVRSIAGADKNAIVEARIFDVFTGETIDENEKSLGIEVMLQPAEK 762 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 +F D +++ + D+IV KK A LR+ Sbjct: 763 SFTDAELQAISDKIVAAAAKK-GARLRA 789 >gi|83944296|ref|ZP_00956751.1| phenylalanyl-tRNA synthetase beta subunit [Sulfitobacter sp. EE-36] gi|83844840|gb|EAP82722.1| phenylalanyl-tRNA synthetase beta subunit [Sulfitobacter sp. EE-36] Length = 799 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 328/817 (40%), Positives = 480/817 (58%), Gaps = 31/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT S+++I LT +GLEVE V++R A L+ FT+ V S E++PD D Sbjct: 1 MKFTLSWLKEHLDTTASIDEITYALTDLGLEVEGVEDRGAKLADFTLGYVQSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++DT + + Q++CGAPN R G+ V A PG +P + + V KIRG+ES GMM Sbjct: 61 RLQICQVDTDEGVQ-QIICGAPNARQGITVVVAKPGVYVPGIDTTIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP VG R D+L +DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSEEHDGIIELP-SGNVGDRFIDWLAENDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK+ ++ P+ + D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKQRDVPAVEGQFPCPISVSIDEDTLDQCPVFYGRVIRGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 ++ +L+A+GLR IS LVD+TN+ + DR P HVFDA +++ + L + RA GE ++ LD+ Sbjct: 239 LQDKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKVAGNSLRIHRAKGGETLMGLDD 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY S +I+ +++SIAG++GG +GC +T +V VE A +DP+ A +G+ L I Sbjct: 299 KEYTFSEGMTLISDAEKVESIAGVMGGAESGCFMDTVNVFVEAAYFDPVRTAYTGRALKI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERG+D + ++H +IL + GG AS++ +A + R + V+ Sbjct: 359 NSDARYRFERGIDPEWTPYAIEHATQMILDIAGGEASEVVVAGKVPDYSRAYKLDAARVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+ + + + L LGF + G+ VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMTISESEQRKTLTALGFRLEGDM----AHVPSWRPDVQGEADLVEEVARIASLTKL 474 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PLP LT K LS Q R +R A+ E V++SFI + + LFGGG + Sbjct: 475 EGRPLPRLTTGVPKPVLSPMQRREAIARRACAALGYNECVSYSFIDQASAALFGGGTDDT 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS DMS+MR SLLP LL+A RN R D A+FEV V+ P Q +G+ Sbjct: 535 RLENPISNDMSHMRPSLLPALLQAAARNQARGFPDMALFEVGPVFTGGEPGDQHLQISGL 594 Query: 592 RKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 GS+G + G+ R VD+FD KAD +V+ + ++ W+ Sbjct: 595 LTGSTGPKDVHGA-----------SRPVDVFDVKADIEAVLSAIGAPAKVQINRNGADWF 643 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VLG FGE HP +L + P GF ++ +P+ +K T+ + Sbjct: 644 HPGRHGQICLGPKKVLGVFGEIHPRVLAALDVKGPAMGFTIWPAEVPLP-RKSGATRPAL 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 + S+L V+RD AF+VD + A TLVN D+ LIDDV VFD F G +LGEGKKS+A+ Sbjct: 703 NTSALQAVERDFAFVVDADVDALTLVNAAMGADKALIDDVRVFDEFIGGALGEGKKSLAL 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T +D DI + ++++ V K + VLR Sbjct: 763 TVRMQPSDKTLKDADIEAVGAKVIDKVTKASGGVLRG 799 >gi|56552409|ref|YP_163248.1| phenylalanyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis ZM4] gi|81354772|sp|Q5NMC3|SYFB_ZYMMO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56543983|gb|AAV90137.1| phenylalanyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis ZM4] Length = 789 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 320/808 (39%), Positives = 475/808 (58%), Gaps = 23/808 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T+ S+++I DTLT IG EVE V N + L F I ++L+ ER+P D Sbjct: 1 MKFTLSWLKEHLETEASVQEIADTLTRIGHEVESVHNPADGLEAFRIARILTAERHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 IL +D G+ + +QVVCGA N R GL+GV+A PG +P ++ + + IRG+ES GMM Sbjct: 61 RLQILAVDVGESEPLQVVCGAANARAGLVGVFAAPGVYVPGIDVTLKIASIRGVESRGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L D+ I++LP +APVG ++ L DP+ DV++TP+R DC+GVRG+A DL Sbjct: 121 CSIRELGLGDEHEGILDLPHEAPVGQSYVEWAGLDDPVFDVAITPDRQDCMGVRGLARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AG+G+LK + I +++ P EI ++D C F + G++N +P WM +RL Sbjct: 181 ATAGIGRLKPLAIPRVPVTDAAPAEIA--IEDKEGCPAFFGQLIHGIQNGPSPEWMARRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+G R SALVDITNY+ D G P HV+DA I LT R+A + EKI AL+ + YDL Sbjct: 239 RAIGFRPTSALVDITNYIMFDLGRPLHVYDAGAIKGKLTARKAQNNEKIEALNGKSYDLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA D +++IAGI+G + A +TTDV++E A +DP ++++G+ LG+ +D+R Sbjct: 299 PSITVIADDQGVKNIAGIMGAEKASVSGSTTDVIIECAYFDPAAVSQAGQKLGLASDARI 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L+ ++L CGG A+ I + S V L+ +D Sbjct: 359 RFERGVDPAFLNEGLQIAARMVLDFCGGKATQAVTLGEAPSAVPVISYDPSYVTSLAAMD 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ILE+LGF++ + V VPS+R+DV AD+V +I+RI G+D + S L Sbjct: 419 VAPARQREILEQLGFAIDAGW---RVRVPSFRRDVSVVADIVADIVRIEGLDNVPSTALD 475 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + Q R V+R A+ M E V WSFIS++ + +FGG +L NPIS Sbjct: 476 RGDGVARPIATHGQLTERRVRRAAAAFGMNEAVTWSFISEKDANIFGGAFWKLA--NPIS 533 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 DM MR SLLPGLL A RN DR + +FEV G++Y+ R I Sbjct: 534 EDMKVMRPSLLPGLLTAAKRNRDRGQSTIRLFEV----------GRRYLQEAERPTLGLI 583 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 R+ D + + D +DAK ++++ + ++ L+ A YHPGRSG + Sbjct: 584 FAGERMSRDWQYGKSQNFDAYDAKTAVSAMLDSVGMPVEKLQLLGDAGDVYHPGRSGRLC 643 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + L FGE HP IL F + P+ G E++LD++P+ +K + ++ S L PV Sbjct: 644 LGPKNTLAVFGEIHPAILAEFNMEGPVIGAEIFLDALPL-RKNSGQLRQPYAPSMLQPVF 702 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF++ + +PA LV I D+ I + +FDVF G+++ E +KS+ I+V++QP + Sbjct: 703 RDFAFLLPKDVPAADLVRSIAGADKNAIVEARIFDVFTGETIDENEKSLGIEVMLQPAEK 762 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 +F D +++ + D+IV KK A LR+ Sbjct: 763 SFTDAELQGISDKIVAAAAKK-GARLRA 789 >gi|329849643|ref|ZP_08264489.1| phenylalanyl-tRNA synthetase, beta subunit [Asticcacaulis biprosthecum C19] gi|328841554|gb|EGF91124.1| phenylalanyl-tRNA synthetase, beta subunit [Asticcacaulis biprosthecum C19] Length = 791 Score = 555 bits (1431), Expect = e-156, Method: Compositional matrix adjust. Identities = 318/812 (39%), Positives = 478/812 (58%), Gaps = 29/812 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+LSWLKDHLDT ++ + +T GLEVE + D +AL+ F++ KV+ R+P+ D Sbjct: 1 MKFSLSWLKDHLDTTADIDAVAAAMTMAGLEVEDIHDPAKALTAFSVAKVVEAARHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DT ++ ++VCGAPN R G+ ++AP G+ +P + + + +RG+ S GMM Sbjct: 61 KLQVLQVDTIDGRK-EIVCGAPNARAGMTTIYAPIGAYVPGLGVTLVEKPVRGVVSNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I+++ + VG + ++P+ID +TPNR D +GV GIA DL Sbjct: 120 CSAAELGLGDDHDGILDISMILEVGTPAAVVFG-AEPVIDFEVTPNRPDWLGVHGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A GLG K+ I+ + P+ IK D C+ FA ++GV+N +P W++ +L Sbjct: 179 AATGLGAFKDAPIAAVPGQFACPVAIKVD---GEACQVFAGRVIRGVKNGPSPEWLQAKL 235 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 K++GL+ ISALVDITNY+S DR P HV+D S++S V+ + GE++ ALD + Y L Sbjct: 236 KSIGLKPISALVDITNYLSFDRARPLHVYDLSKLSGSVIVAGLSPDGEQLEALDGKTYAL 295 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + I + + G++GG+ D+ T DV VE A +DPI A++G+ L + +D++ Sbjct: 296 NGEMCAIMDSSGVIGLGGVMGGESTKVDEATADVFVESAWFDPIRTAQTGRTLSLFSDAQ 355 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRF RGVD + +P L+ LIL LCGG S++ +A + + F + VKRL+G+ Sbjct: 356 YRFARGVDPESAVPGLELATKLILELCGGEPSEVVVAGEAPARRPDVAFDPAYVKRLTGL 415 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DVP ++ +IL LGF V + VSVPSWR+DV+ KADLVEEI RIYG D++ + PL Sbjct: 416 DVPADEITKILTALGFGVASDG---TVSVPSWRRDVDGKADLVEEIARIYGFDKLPATPL 472 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P L+ QQ++ R +R LA+ E V WSF+ ++ + LFGGG L + NPI Sbjct: 473 PTIPPRPGGVLTAQQAKARAARRALAALGYSEAVTWSFMRQDWAALFGGGADALVLANPI 532 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +++++ MR ++LP LL+A GRN R +FE+ VY P QK + A +R Sbjct: 533 ASELNCMRPAVLPNLLEAAGRNASRGQYGVQLFEIGPVYFGLEPGDQKPVIAALRA---- 588 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIE----PFVSLDSLRFESGAPSWYHPGRS 653 R W++ E+ +LF K D LS++E P SL SL S A W HPGRS Sbjct: 589 -PDKARHWTNARED-----NLFALKGDLLSLLETVGVPVASL-SLVQGSNAAHW-HPGRS 640 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 ++ + V+ FGE HP +L L GFE+ +D++P+ + K K++ + LSSL Sbjct: 641 ARLQLGPKQVIAEFGELHPAVLKAMDLDGAYVGFEIRVDNLPVGKAKSGKSRGALTLSSL 700 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 P+ RD AF+V AG LV IK D+ LI D VFDV+ G+ + +G KS+A++V++ Sbjct: 701 MPLTRDFAFLVADTAAAGDLVRAIKGADKALIGDARVFDVYTGQGVPDGHKSLAVEVVLT 760 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 P T + +I L +++ +K AVLRS Sbjct: 761 PTDKTLTEPEIDALSQKVIA-AAQKAGAVLRS 791 >gi|296284913|ref|ZP_06862911.1| phenylalanyl-tRNA synthetase subunit beta [Citromicrobium bathyomarinum JL354] Length = 795 Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust. Identities = 313/809 (38%), Positives = 467/809 (57%), Gaps = 19/809 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF++ WLK L+TD S+++I DTL +IG EVE + D E L+ FT+ +VL+ +PD D Sbjct: 1 MKFSIEWLKYFLETDASVQEIADTLNAIGHEVEGIEDPAEKLAGFTVAEVLTAGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L + TG+ + +QVVCGAPN R G+ GV PG+ +P N M + KIRG+ES GMM Sbjct: 61 KLQVLSVSTGEGEPLQVVCGAPNARAGMKGVLGQPGAVVPANGMELKKSKIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L ++ I+ELP DAPVG ++Y S PIIDV++TP+R DC+GV GIA DL Sbjct: 121 CSVRELELGEEHDGIIELPADAPVGASFAEYHAAS-PIIDVAITPDRPDCMGVMGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG+ K + + P+EI+ DD+ C F ++GV N +P WM++RL Sbjct: 180 AAAGLGRFKPVEAGDVSGEGACPVEIR--TDDAEGCPAFYGRVIRGVSNGASPEWMQRRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA G R ISALVD TNY+ L G P+HV+D +++S + RRA GE+I AL+ + Y L Sbjct: 238 KAAGQRPISALVDCTNYLMLAFGRPAHVYDLAKLSGPVVARRAKDGEQIEALNEKTYTLD 297 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA D + +AGI+GG+H+G + TTDVL+E+A +DP I +G+ LG+ +D+R Sbjct: 298 NTMTVIADDAGVHDVAGIMGGEHSGATEATTDVLLEIAYFDPARIGVTGRKLGLTSDART 357 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + + L + SLI+ CGGT +++ A +P+ + F + +L G++ Sbjct: 358 RFERGVDPEFLDEGLAILTSLIVKTCGGTPTEVVRAGQPPVEPKVVQFDPARTAKLGGVE 417 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V + IL L F V D + V+ P R D+E ADLVEE++RI G+D++ S PL Sbjct: 418 VAEDRQRAILTALDFKVA---DDWTVTCPPRRHDIEGPADLVEEVVRIEGLDKVASVPLT 474 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 K + +Q R ++R A+R + E V WSF+ ++ F G + NPIS Sbjct: 475 RAPGVAKPTATPEQLVQRKLRRGAAARGLHEAVTWSFLPVPEAEHFADGADLWVLDNPIS 534 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGIRKGSSG 597 D+ MR SLLPGLL A R DR A +FE+ Y + + G+ Sbjct: 535 EDLKAMRPSLLPGLLTAAKRAADRGAAGARLFEIGRRYFRGEGGHSDERATLGLVLAG-- 592 Query: 598 IEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 E + R W++ + + D +D + +D+L A + +HPG+S + Sbjct: 593 -EKTPRGWANG---KAQGFDAYDAKAEALALLEAAGAPVDNLMVMGEAGAQFHPGQSATL 648 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 + + VL FG HP L F + P+ E++LD+IP ++K + +L PV Sbjct: 649 RLGPKKVLARFGALHPATLKAFDIDGPVVAAEIFLDAIP-AKKNAEFARSTYSPPALQPV 707 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 RD AF+VD +PAG LV ++ D+ I D +FD F G+ + EGK S+A++V +QP + Sbjct: 708 TRDFAFLVDSAMPAGDLVKAVRGADKQRIVDARIFDRFDGQGVPEGKTSLALEVTLQPGE 767 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +F D++++ + + +V+ KT A LR+ Sbjct: 768 KSFTDEELKAISNAVVK-AAGKTGAELRA 795 >gi|315498831|ref|YP_004087635.1| phenylalanyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] gi|315416843|gb|ADU13484.1| phenylalanyl-tRNA synthetase, beta subunit [Asticcacaulis excentricus CB 48] Length = 793 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 320/809 (39%), Positives = 474/809 (58%), Gaps = 23/809 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+LSWLKDHLDTD ++ + +T+ GLEVE V + A L+PFT+ KV+ R+P+ D Sbjct: 1 MKFSLSWLKDHLDTDADIQAVAAAMTAAGLEVEDVADPAAKLTPFTVAKVVEAARHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DT ++ ++VCGAPN R GL V+AP G+ +P ++ + + +RG+ S GMM Sbjct: 61 KLQVLQVDTVDGRK-EIVCGAPNARAGLTTVYAPIGAYVPGLDVTLVEKPVRGVVSNGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L D IMEL D VG +S L +P+ID +TPNR D +GV GIA DL Sbjct: 120 CSAAELELDGDPDGIMELSDDLAVGTPVSAVFAL-EPVIDFEVTPNRPDWLGVHGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A GLG KE IS + P+ +K D D C F+ ++GV+N +P W+ +L Sbjct: 179 AATGLGAFKEAPISPVKGTFPCPITVKVDGD---ACPLFSGRVIRGVKNGPSPKWLADKL 235 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 ++GL+ ISALVDITNY+S DR P HV+D ++S DV+ + +ALD + Y + Sbjct: 236 TSIGLKPISALVDITNYLSFDRARPLHVYDVKKLSGDVIEAGLPADTCEFVALDGKTYVV 295 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +PD I+ + + G++GG G D T DV +E A +DPI IA++G+ I +D++ Sbjct: 296 TPDMTTISDASGVIGLGGVMGGASTGVDLETVDVFLESAWFDPIRIAQTGRTTTITSDAQ 355 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRF RGVD + ++P L+ LIL LCGG SDI +A + + F + V +L+G+ Sbjct: 356 YRFARGVDPEFVVPGLELATQLILDLCGGEPSDIVVAGEAPARKPDVAFDPAYVAQLTGL 415 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DVP + IL LGF I + + VSVPS+R+DV+ KADLVEE+ R+YG + I + PL Sbjct: 416 DVPHDKVETILTALGFG-ITKTTPWTVSVPSFRRDVDGKADLVEEVARVYGFNHIPATPL 474 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + L+ Q+R R +R LA+ E V WSF+ + + LFGGG + + NPI Sbjct: 475 PAVAPKSGGVLTPSQARARTARRALAAFGYSEAVTWSFMPQGYAKLFGGGSDAMVLANPI 534 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +++++ MR S+LP LL+A GRN + +FE+ VY P QK + A ++ Sbjct: 535 ASELNCMRPSILPNLLEAAGRNASKGYPGAQLFEIGPVYFGLEPNDQKTVIAALKA---- 590 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPS-WYHPGRSGI 655 R WS ++ LF K+D L+++E + + SL+ GA S W+HPGRS Sbjct: 591 -PDKARHWSATGQDA-----LFALKSDLLALLEELNMPVASLQLVQGANSDWWHPGRSAR 644 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + V+ FGE HP++L L GFE+ LD +P + K K+K + LS+L P Sbjct: 645 LQLGPKTVMAEFGELHPSVLKALDLDGAYVGFEIRLDLLPQPKAKSGKSKGALSLSNLMP 704 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V +G LV I+ D+ LI + VFDV+QG+ + EG+ S+A++V +QP Sbjct: 705 LTRDFAFLVAAGTASGDLVRAIRGADKLLISEARVFDVYQGQGVPEGQVSLAVEVTLQPA 764 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 T + +I + +IV +K AVLR Sbjct: 765 DKTLTEPEIDAVSQKIVA-AAQKAGAVLR 792 >gi|296116371|ref|ZP_06834986.1| phenylalanyl-tRNA synthetase subunit beta [Gluconacetobacter hansenii ATCC 23769] gi|295977071|gb|EFG83834.1| phenylalanyl-tRNA synthetase subunit beta [Gluconacetobacter hansenii ATCC 23769] Length = 820 Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust. Identities = 321/847 (37%), Positives = 475/847 (56%), Gaps = 70/847 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+LSWL++HLDT S+E IC L +IGLEVE +++R A L+PF ++LS E++P+ D Sbjct: 1 MKFSLSWLREHLDTTASVEDICARLNTIGLEVEGIEDRGAVLAPFRTARILSAEQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + ++D G+ +QVVCGAPN R GL ++APPG+ IP +++ + KIRG S GM Sbjct: 61 RLRVCQVDAGEGFARVQVVCGAPNARTGLSVIFAPPGTWIPGSDITIKAGKIRGEASGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L ++ I ELP D VG + + ++ DP+I++++TPNR D + +RGIA D Sbjct: 121 LCSLRELGLGQETDGIAELPDDTVVGQSYALFADMDDPVIEIAITPNRGDALAIRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC-------VKGVRNNVA 230 L AAG+G L+ P +E++ L S F C ++GVRN + Sbjct: 181 LAAAGMGTLR------PWLAETVEGTFASPL---SWANTFTQACPWVLGRTIRGVRNGPS 231 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W+++RL++VGLR ISALVDITNY + D G P HVFD +++ VLT+ R GE + Sbjct: 232 PEWLQRRLESVGLRPISALVDITNYFAFDLGRPLHVFDVAKVGGKVLTLCRG-EGETLRT 290 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E+ ++ ++ VIA +QS+AGI+GG+ G D TTDV VE AL+DP++IA SG+ Sbjct: 291 LDGAEHVMTVEDCVIADANGVQSLAGIMGGEATGVDAATTDVFVECALFDPVHIALSGRR 350 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +D+R RFERGVD L+ +IL LCGG AS++ A R + Sbjct: 351 HNLHSDARQRFERGVDQALPPAALEAATRMILDLCGGEASEVVSAGAPPAWQRDAHLRFA 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQD--------------- 452 + L G+ V + ++ LE LGF V E D VSVPSWR D Sbjct: 411 RIATLGGLTVAPDQAVASLEGLGFEVR-ERDAQHVVVSVPSWRNDIATPMVLDQARDLPP 469 Query: 453 ------------VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 V+ + DL+EE+LR+ G+D + + LP L+ Q R +R Sbjct: 470 EQAARAAQGAMAVDSEVDLIEEVLRLQGMDAVPAVSLPPVSAVPVPALTAAQVRVASARR 529 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 LA+R ++E V +SF++ Q+ FG L +LNPI+AD+ MR + L LL A N Sbjct: 530 HLAARGLLETVGFSFVAHAQAAAFGETPESLHLLNPIAADLDQMRPTPLVNLLNAVQHNA 589 Query: 561 DRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLF 619 R D +FE+ + GQ+ + AGIR G S I G VDL+ Sbjct: 590 VRGYPDLGLFEIGAGFAE---AGQRQVVAGIRSGHSARIPGHA----------ATPVDLW 636 Query: 620 DAKADALSVIE-PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 AKAD L V+ +++ L AP+ YHPGRSG ++ ++VLGYFG+ HP +L Sbjct: 637 AAKADILEVLRIAGAAMEGLSITPDAPAHYHPGRSGTVRQGPKLVLGYFGQLHPALLSER 696 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 G+ P+ GFE +++ +P +++R + +LS P+ RD AFIV +PA L+ ++ Sbjct: 697 GIDLPVVGFETFIEDVPEPKRRR---RAPPNLSPFQPLHRDFAFIVAGDVPAEKLLRAVR 753 Query: 739 NVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +R LI V++FDV++G + G KS+ +++ IQP+ D DI + R++ K Sbjct: 754 GAERNLISAVSLFDVYEGDKIPAGYKSMGVEITIQPIDRNLTDADIEAVCARVIAAAQKT 813 Query: 798 TNAVLRS 804 NA LR Sbjct: 814 CNAELRG 820 >gi|254292426|ref|YP_003058449.1| phenylalanyl-tRNA synthetase subunit beta [Hirschia baltica ATCC 49814] gi|254040957|gb|ACT57752.1| phenylalanyl-tRNA synthetase, beta subunit [Hirschia baltica ATCC 49814] Length = 803 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 322/800 (40%), Positives = 467/800 (58%), Gaps = 35/800 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF++SWLKD+L+TD L I D + GLEVE+V+N E L+ FT KV E++PD D Sbjct: 1 MKFSVSWLKDYLETDADLSGIIDAMILAGLEVEEVENPAEKLAAFTTAKVSKAEQHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN--VRKIRGIE 113 C + D K Q+VCGAPN R G+ V+AP G+ IP + ++ RK+RG+E Sbjct: 61 KLRVCTVETKDGTK----QIVCGAPNARTGITAVYAPLGAYIPGLDFALDKKPRKLRGVE 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S+GMMCS E+ + +S IME+ D PVG +++ L L+D +ID +TPNR D +GV G Sbjct: 117 SSGMMCSATEIEVGTESDGIMEIEGDFPVGTPIAEVLGLNDAVIDFEVTPNRPDWLGVTG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL AAGLGK+K + P S P IK DD+ C F +KGV+N +P+W Sbjct: 177 IARDLAAAGLGKVKIPEV--PEIKGSFPCPIKATSDDTEACPVFMGRLIKGVKNGPSPDW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+ RLKA+G+ + LVD+TNYVS DR P H +DA ++S + R A +GEK+ ALD+ Sbjct: 235 MQARLKAIGINPKNMLVDVTNYVSFDRCRPLHAYDADKLSGNIVARLAKTGEKLEALDDN 294 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y+L+ D +IA D I GI+GG + T ++ +E A++DP+ AR+G++ GI+ Sbjct: 295 TYELNEDMCIIADDSGPIGIGGIMGGLGTASSEETVNIFLEAAIFDPLRTARAGRSTGIV 354 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 +D+RYR ERG+D L LIL CGG ASDI + + F ++KR Sbjct: 355 SDARYRNERGIDPNSCREGLDLATQLILDACGGEASDIVVGGAEPAPQEAVDFKPVDMKR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIG----EYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 L+G+D+ + IL LGF V E +++SVPS+R+DV + AD+VEE++RI G Sbjct: 415 LTGVDMSADRMKEILATLGFGVDKKAKLEDSLWKISVPSFRRDVFQSADIVEELIRIEGF 474 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + ++ LP K+ ++ Q+R R +RVLASR +E V+WSF+ +E + FGGG Sbjct: 475 NALPTDSLPREAGAAKQVVTPLQNRVRTSRRVLASRGFLEGVSWSFMDRETAKSFGGGDN 534 Query: 530 E-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + L + NPI+ D++ MR S L L +A RNVD + +FEV VY D P+ Q+ Sbjct: 535 DALVVDNPIANDLNYMRPSALANLAQAIQRNVDHGAEEVRLFEVGPVYLGDGPKDQRTAV 594 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL--RFESGAP- 645 + K R WS + D F AKAD +V+ S+D RF+ G P Sbjct: 595 TSLVKPR-----PARHWSGANAP----YDAFAAKADLFAVL---ASIDQPGERFQIGEPV 642 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPGRS ++ + V+G FG+ HP +L + P+ GFE+YL++IP + K KT Sbjct: 643 GGHWHPGRSASLRLGPKNVIGTFGQLHPAVLKKLDVEGPMFGFEIYLEAIPQVKSKGGKT 702 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 K + + L P++RD AF+ D PAG + N D +L+ +FDV+ G+ + EGKK Sbjct: 703 KPRLEKADLTPIRRDFAFLADASTPAGEISKAASNADKKLVTACRIFDVYDGEGMPEGKK 762 Query: 764 SVAIQVLIQPLKDTFRDDDI 783 SVAI+V +QP + +D DI Sbjct: 763 SVAIEVTLQPRETQLKDADI 782 >gi|83953337|ref|ZP_00962059.1| phenylalanyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] gi|83842305|gb|EAP81473.1| phenylalanyl-tRNA synthetase beta subunit [Sulfitobacter sp. NAS-14.1] Length = 799 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 326/817 (39%), Positives = 479/817 (58%), Gaps = 31/817 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HLDT S+++I LT +GLEVE V++R A L+ FT+ V S E++PD D Sbjct: 1 MKFTLSWLKEHLDTTASIDEITYALTDLGLEVEGVEDRGAKLAEFTLGYVQSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++DT + + Q++CGAPN R G+ V A PG +P + + V KIRG+ES GMM Sbjct: 61 RLQICQVDTDEGVQ-QIICGAPNARQGITVVVAKPGVYVPGIDTTIGVGKIRGVESFGMM 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-----IIDVSLTPNRSDCIGVRG 173 SE+EL LS++ I+ELP VG R D+L +DP +I++++TPNR D +GVRG Sbjct: 120 ASERELELSEEHDGIIELP-SGNVGDRFIDWLAENDPAKVDPVIEIAITPNRPDALGVRG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA DL A GLG LK+ ++ P+ + D D C F ++GV+N +P W Sbjct: 179 IARDLAARGLGTLKQRDVPAVEGQFPCPISVSIDEDTLDQCPVFYGRVIRGVKNGPSPAW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 ++ +L+A+GLR IS LVD+TN+ + DR P HVFDA +++ + L + RA GE ++ LD+ Sbjct: 239 LQDKLRAIGLRPISFLVDVTNFFTYDRNRPLHVFDADKVAGNCLRIHRAKGGETLVGLDD 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY + +I+ +++SIAG++GG +GC +T +V VE A +DP+ A +G+ L I Sbjct: 299 KEYTFNEGMTLISDAEKVESIAGVMGGAESGCSMDTVNVFVEAAYFDPVRTAYTGRALKI 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +D+RYRFERG+D + ++H +IL + GG AS++ +A + R + V+ Sbjct: 359 NSDARYRFERGIDPEWTPYAIEHATRMILDIAGGEASEVVVAGKVPDFSRAYKLDAARVQ 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+ + + + L LGF + G+ VPSWR DV+ +ADLVEE+ RI + ++ Sbjct: 419 SLVGMTISESEQRKTLTALGFRLEGDM----AHVPSWRPDVQGEADLVEEVARIASLTKL 474 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PLP LT K LS Q R +R A+ E V++SFI + + LFGGG + Sbjct: 475 EGRPLPRLTPGVPKPVLSPMQRREAIARRACAALGYNECVSYSFIDQASAALFGGGTDDT 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS DMS+MR SLLP LL+A RN R D A+FEV V+ P Q +G+ Sbjct: 535 RLENPISNDMSHMRPSLLPALLQAAARNQARGFPDMALFEVGPVFTGGEPGDQHLQISGL 594 Query: 592 RKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 GS+G + G+ R VD+FD KAD +V+ + ++ W+ Sbjct: 595 LTGSTGPKDVHGA-----------SRPVDVFDVKADIEAVLSAIGAPAKVQINRNGADWF 643 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR G I + VLG FGE H +L + P GF ++ +P+ +K T+ + Sbjct: 644 HPGRHGQICLGPKKVLGVFGEIHLRVLAALDVKGPAMGFTIWPAEVPLP-RKSGATRPAL 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 + S+L V+RD AF+VD + A TLVN D+ LIDDV VFD F G +LGEGKKS+A+ Sbjct: 703 NTSALQAVERDFAFVVDADVDALTLVNAAMGADKALIDDVRVFDEFIGGALGEGKKSLAL 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +QP T +D DI + ++++ V K + VLR Sbjct: 763 TVRMQPSDKTLKDADIEAVGTKVIDKVTKASGGVLRG 799 >gi|167645153|ref|YP_001682816.1| phenylalanyl-tRNA synthetase subunit beta [Caulobacter sp. K31] gi|167347583|gb|ABZ70318.1| phenylalanyl-tRNA synthetase, beta subunit [Caulobacter sp. K31] Length = 812 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 331/833 (39%), Positives = 478/833 (57%), Gaps = 50/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ S + +T GLEVE V D L+ FT+ +++ +P+ D Sbjct: 1 MKFTLSWLKDHLDTEASATTVVAAMTMAGLEVEHVTDPATKLAAFTVARIVEAAPHPNAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + +D K ++VCGAPN R GL V+AP G+ +P + + + +RG+ S Sbjct: 61 RLRVCQVDTVDGRK----EIVCGAPNARAGLTTVYAPIGAYVPGLGVTLVEKPVRGVVSN 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL D S I+EL D VG S L L + +ID +TPNR D +GV GIA Sbjct: 117 GMLCSGSELEADDGSEGILELSDDLAVGTPASQALGL-EAVIDFEVTPNRPDWLGVAGIA 175 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AAG+G LK+++I+ + P+ IK D D C F+ +KGV+N +P W+ Sbjct: 176 RDLAAAGVGTLKDLSIAPVPGTFPCPITIKVDGD---ACPVFSGRLIKGVKNGPSPKWLA 232 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR-ISDVLTVRRACSG----EKILAL 290 RLKA+GLR I+ LVDITN ++ DR P HV+DA++ + V+ R G E ++AL Sbjct: 233 DRLKAIGLRPINTLVDITNLITYDRARPLHVYDAAKLVGTVIEARLGHHGVNGDEHLIAL 292 Query: 291 DNQEYDLSPDNVVI--ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 D + Y+L+P+ VI A R + G++GG+ GC D+TTDV +E A ++PI A++G+ Sbjct: 293 DGKTYELTPEMSVISDAEGERPIGLGGVMGGESTGCSDDTTDVFLESAWFEPIRTAQTGR 352 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 GI +D++YRF R VD ++P L+ LIL LCGG S+I +A P I+F Sbjct: 353 VTGINSDAQYRFARTVDTGSLVPGLELATRLILDLCGGEPSEIVVAGEAPAAPGPILFDP 412 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD----KFE--------VSVPSWRQDVEEK 456 + V+ LSG+ + E +L+IL LGF++ D F V+ P++R+DV+ K Sbjct: 413 AYVEALSGLAIEPERTLKILTDLGFAIAPPTDVSATAFAMNAESLVCVTPPTFRRDVQGK 472 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+ RI G + S PLP L+ +Q+R+R +R LA+ E V WSF Sbjct: 473 ADLVEEVARIAGYGALPSTPLPQAPRAVGGVLTSRQARSRIARRALAAAGYNEAVTWSFT 532 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 S++ + LFGGG +L + NPI++++ MR S+LP L++A GRN + D A+FE+ V+ Sbjct: 533 SQKIAALFGGGAAQLVLANPIASELDCMRPSILPNLIEAAGRNARQGFPDAALFEIGPVF 592 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE----PF 632 D P+ QK A I + R W E D+F KAD ++++E P Sbjct: 593 FGDRPQDQKTTIAAILPPR-----APRGWDKAPVE-----DVFTVKADLMALLEEIGAPV 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL + + A SW+HPGRS ++ + VL FGE HP +L ++ P+ GFE+ L+ Sbjct: 643 ASLQTA--QGSASSWWHPGRSARLQLGPKAVLAEFGELHPAVLKALDVAGPVYGFEITLE 700 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFD 751 +IP +KK KTK S L P+ RD AF+VD+ PAG LV D+ LI V VFD Sbjct: 701 AIPEPKKKAVKTKPAFSPSPLMPLTRDFAFVVDKVKPAGDLVKAAAGADKALIAAVRVFD 760 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V++G + +G KS+A++VLIQP T + +I L IV V+K LRS Sbjct: 761 VYEGPGVPDGSKSIALEVLIQPRDKTLTEAEIEALSAGIVA-AVEKVGGKLRS 812 >gi|260753914|ref|YP_003226807.1| phenylalanyl-tRNA synthetase subunit beta [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553277|gb|ACV76223.1| phenylalanyl-tRNA synthetase, beta subunit [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 789 Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust. Identities = 318/808 (39%), Positives = 472/808 (58%), Gaps = 23/808 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+T+ S+++I DTLT IG EVE V N + L F I ++L+ ER+P D Sbjct: 1 MKFTLSWLKEHLETEASVQEIADTLTRIGHEVESVHNPADGLEAFRIARILTAERHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 IL +D G+ + +QVVCGA N R GL+GV+A PG +P ++ + + IRG+ES GMM Sbjct: 61 RLQILAVDVGESEPLQVVCGAANARAGLVGVFAAPGVYVPGIDVTLKIASIRGVESRGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L D+ I++LP +APVG ++ L DP+ DV++TP+R DC+GVRG+A DL Sbjct: 121 CSIRELGLGDEHEGILDLPHEAPVGQSYVEWAGLDDPVFDVAITPDRQDCMGVRGLARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AG+G+LK + I +++ P I ++D C F + G++N +P WM +RL Sbjct: 181 ATAGIGRLKPLAIPRVPVTDAAPAGIT--IEDKEGCPAFFGQLIHGIQNGPSPEWMARRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+G R SALVDITNY+ D G P HV+DA I L R+A + EKI AL+ + YDL Sbjct: 239 RAIGFRPTSALVDITNYIMFDLGRPLHVYDAGAIKGKLIARKAQNNEKIEALNGKSYDLD 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA D I++IAGI+G + +TTDV++E A +DP ++++G+ LG+ +D+R Sbjct: 299 PSITVIADDQGIKNIAGIMGAEKGSVSGSTTDVIIECAYFDPAAVSQAGQKLGLASDARI 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L+ ++L CGG A+ I + S V L+ +D Sbjct: 359 RFERGVDPAFLNEGLQIAARMVLDFCGGKATQAVTLGEAPSAVPVISYDPSYVTSLAAMD 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ILE+LGF++ + V VPS+R+DV AD+V +I+RI G+D + S L Sbjct: 419 VAPARQREILEQLGFAIDAGW---RVRVPSFRRDVSVVADIVADIVRIEGLDNVPSTALD 475 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + Q R V+R A+ M E V WSFIS++ + +FGG +L NPIS Sbjct: 476 RGDGVARPIATHGQLTERRVRRAAAAFGMNEAVTWSFISEKDANIFGGAFWKLA--NPIS 533 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 DM MR SLLPGLL A RN DR + +FEV G++Y+ R I Sbjct: 534 EDMKVMRPSLLPGLLTAAKRNRDRGQSTIRLFEV----------GRRYLQEAERPTLGLI 583 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 R+ D + + D +DAK ++++ + ++ L+ A YHPGRSG + Sbjct: 584 FAGERMSRDWQYGKSQNFDAYDAKTAVSAMLDSVGMPVEKLQLLGDAGDVYHPGRSGRLC 643 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + L FGE HP IL F + P+ G E++LD++P+ +K + ++ S L PV Sbjct: 644 LGPKNTLAVFGEIHPAILAEFNMEGPVIGAEIFLDALPL-RKNSGQLRQPYAPSMLQPVF 702 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF++ + +PA LV I D+ I + +FDVF G+++ E +KS+ I+V++QP + Sbjct: 703 RDFAFLLPKDVPAADLVRSIAGADKNAIVEARIFDVFTGETIDENEKSLGIEVMLQPAEK 762 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 +F D +++ + D+IV KK A LR+ Sbjct: 763 SFTDAELQAISDKIVAAAAKK-GARLRA 789 >gi|148259378|ref|YP_001233505.1| phenylalanyl-tRNA synthetase subunit beta [Acidiphilium cryptum JF-5] gi|146401059|gb|ABQ29586.1| phenylalanyl-tRNA synthetase beta subunit [Acidiphilium cryptum JF-5] Length = 827 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 327/842 (38%), Positives = 479/842 (56%), Gaps = 53/842 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD SL+ I +TL++IGLEVE + +R A L+PF I +V+ ++P+ D Sbjct: 1 MKFTLSWLKTHLDTDASLDAIAETLSAIGLEVESIADRGASLAPFRIARVIEATQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G E+ VVCGAPN R G+ V+APPGS +P + + V +IRG+ S GM+ Sbjct: 61 RLRVCRVDPGDGTEVSVVCGAPNARTGMRAVFAPPGSFVPGTGITLKVGEIRGVPSAGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL L D I++LP DAPVG + + L DP+I++ +TPNR D VRG+A DL Sbjct: 121 VSERELGLGDSHDGIIDLPDDAPVGTPYARWAGLDDPVIEIGVTPNRGDAFAVRGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK ++ + + + ++ C V+GVRN +P+W+++RL Sbjct: 181 AAAGLGTLKPWAPPPIAAAGASSIAWQNAYPEA--CPWVLGRTVRGVRNGESPDWLKRRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 ++VGLR I+ALVDITN+ +LD G P HVFD +I+ D LT+RR +GE L ++ Sbjct: 239 ESVGLRPINALVDITNFFTLDLGRPLHVFDVGKIAGDALTLRRG-AGESFRGLHGRDVTA 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D+ VIA QS+AGI+GG+ GCD+ T DV +E AL+D + IA +G+ GI +D+R Sbjct: 298 TADDCVIADAAGAQSLAGIVGGEATGCDETTRDVFIECALFDRVRIALTGQRTGIHSDAR 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERG+D + L ++++ LCGGTAS+I A R + Sbjct: 358 QRFERGIDFALLPAALDAATAMVIELCGGTASEITEAGAKPDWHRTATMRFERLASFGHS 417 Query: 418 DVPIEDSLRILERLGFS-VIGEYDKFEVSVPSWRQD------------------------ 452 V + + IL+RLGF+ V + V+VPSWR D Sbjct: 418 TVTPDRAADILDRLGFTGVARDAASITVAVPSWRNDIAAADLPGGSALDQHGGLAAATAE 477 Query: 453 --------VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +E + DL+EE+LRI G+D+I+ LP +L+ +Q+RT +RVLA+ Sbjct: 478 AARLGARTIEPEVDLIEEVLRIDGLDRIEPVSLPGAAPVPSASLTPRQARTVRARRVLAA 537 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 R M E V +SF+ + + FGG L + NPI+AD+ MR + L + A RN R Sbjct: 538 RGMAECVTFSFLDRATAGRFGGTPATLALKNPIAADLDQMRPTPLATIALAAARNAARGH 597 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 D A+FE+ Y + +P+GQ +AAG+R G + + W E R DL+DAKAD Sbjct: 598 GDLALFEIGPAYRDVSPDGQDLVAAGLRAGRTPLS-----WV----EPARPADLWDAKAD 648 Query: 625 ALSVI-EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 A++V+ E V LD++ + AP+ YHPGRSG ++ + LG+FG HP++ L Sbjct: 649 AIAVLGELGVPLDAVTVTADAPAHYHPGRSGTLRQGPKTRLGWFGALHPSLCAALDLPEG 708 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 FE+ L +I +++R K V L P++RD AFI D + A ++ K +R Sbjct: 709 SVAFELDLGAIADPKRRR---KAVPSLPQFQPLRRDFAFIADATVTAEAVLRAAKGAERT 765 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 LI +V +FD + G+ L EGK S+A+ V +QP + + D +I + +IV V K T A L Sbjct: 766 LIANVALFDRYAGEKLPEGKVSLAVAVTLQPREASLTDAEIEAVSAKIVAAVAKATGATL 825 Query: 803 RS 804 R Sbjct: 826 RG 827 >gi|190571033|ref|YP_001975391.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019554|ref|ZP_03335360.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357305|emb|CAQ54733.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994976|gb|EEB55618.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 779 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 315/812 (38%), Positives = 477/812 (58%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWL ++L+T+ SLE+I D LT IGLEVE V + L+ F + +VL V +P+ D Sbjct: 1 MKFTLSWLLEYLETNASLEEITDKLTHIGLEVENVIDNSRLAGFVVAEVLEVAPHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + R++ G + +Q+VCGA NV+ G+ V A GS +PE+N + KIRG+ S GM+C Sbjct: 61 LKLCRVNDGS-KVLQIVCGAKNVKEGMKTVLASLGSTLPESNFTIKPTKIRGVLSEGMLC 119 Query: 120 SEKELMLS-DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S EL L+ D+S I+EL D G + + DP+ID+++TPNR DC+GV GIA DL Sbjct: 120 SASELSLTQDESEGIIELSDDYKTGDKFFN----CDPVIDINITPNRGDCLGVYGIARDL 175 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G LK + I +S + + +K +D S G + V+N +P W++ +L Sbjct: 176 AATGIGTLKTLIIPQLTASMNSLINVKV-IDGESFISG---VYITNVKNKESPKWLKDKL 231 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +++G+RSISA+VDITNY+ + G P H +DA +I L VR+A EK + L+++EY L+ Sbjct: 232 ESIGMRSISAIVDITNYIMISFGRPMHAYDAKKIEGELIVRKANDEEKFIGLNDKEYLLN 291 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D VI+ D + IAGI+G K++ C TTD+ +E A +DPI+I +S + LGI TDS Y Sbjct: 292 KDISVISDDKNVHGIAGIMGSKYSECTLKTTDIFLESAWFDPISITKSSRQLGISTDSSY 351 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RF R +D + + L +IL LCGG S I A N+ KI F + +L + Sbjct: 352 RFARSIDPEFTLDGLNLAAKMILDLCGGEVSSIVSAGNLNKADTKINFDYQDANKLGSVS 411 Query: 419 VPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + IL +LGFS+ + + + + VPSWR D++ ADLVEE +RIYG D+IK E L Sbjct: 412 ASPNELFDILTKLGFSIDKKTEGNWNIQVPSWRPDIKIPADLVEEAVRIYGYDKIKEEQL 471 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 ++++++ ++ ++ SR EV+ WSF+S+ + FG + I NP Sbjct: 472 A-------EDVTVEEETQDDLRILMTSRGFHEVITWSFMSESIAEKFGYLNKLFIIDNPF 524 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 + + + MR S++P LL+ T N+ I+D AIFE+ +Y + KY+ +GIR G++ Sbjct: 525 NNNFNIMRPSVIPNLLQVTADNIAHGISDLAIFEIGPIYNGEAQ--SKYVLSGIRSGNN- 581 Query: 598 IEGSGRLWSDKSEERC-RFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 S K+ R +D+FDAKAD ++ +E F V+ D+L E +YHPG+SG Sbjct: 582 --------SPKNHYNTDRKIDIFDAKADLITALELFNVNCDNLAIERAEKEYYHPGKSGS 633 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSS 712 + ++IV GYFGE HP+ILDFF + I GFE+ L++I PIS+KK K Sbjct: 634 LSFRSKIV-GYFGELHPSILDFFNIKQKIVGFELILENIENLPISRKKFIDYK------- 685 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 VKRD AFIV++ + AG+++N++K LI +V +FDV+ G ++ K S+A V Sbjct: 686 YQSVKRDFAFIVNKDVAAGSIINMVKKSSELITEVLIFDVYHGNNIESNKMSIAFSVTFC 745 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +++I+ + IV V + T LR+ Sbjct: 746 SPTHTLTEEEIQKESNMIVNLVCENTEGTLRA 777 >gi|114328170|ref|YP_745327.1| phenylalanyl-tRNA synthetase subunit beta [Granulibacter bethesdensis CGDNIH1] gi|114316344|gb|ABI62404.1| phenylalanyl-tRNA synthetase beta chain [Granulibacter bethesdensis CGDNIH1] Length = 819 Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust. Identities = 329/837 (39%), Positives = 487/837 (58%), Gaps = 52/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD SL +I +TLT IGLE+E +++R A L+ F I +++S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDASLSRIAETLTVIGLELEGIEDRAAALTGFNIARIVSAEQHPNAD 60 Query: 60 -CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +++TG + IQVVCGAPN R G+ V A PG+ +P N M++ +IR + S GM Sbjct: 61 RLRVCQVETGTERGTIQVVCGAPNARAGIGVVLATPGAVVPTNGMVIKEGEIRSVASMGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCS +EL L D+ I+EL D P+G + L DP+I++S+TPNR D +GVRGIA D Sbjct: 121 MCSARELGLGDEHDGIIELSPDLPLGTPYAALAGLDDPVIEISVTPNRGDALGVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAGLG+LK P+++ S I + ++D C ++GVRN +P+W+ R Sbjct: 181 LAAAGLGRLKPFQ-PVPVAA-SASSAIHWAIEDREACPFILGRTIRGVRNGPSPDWLAAR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYD 296 LKA+GLR I+ LVDITNYV D G P HVFD +R+ D LTVRR +GE L+ ++ Sbjct: 239 LKAIGLRPINTLVDITNYVCFDLGRPLHVFDVARVQGDTLTVRRG-AGESFRTLNGKDIT 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 ++ ++ VIA ++S+AGI GG+ GC + TTDV +E AL+DP+ IARSG+ I TD+ Sbjct: 298 VTAEDCVIADATGVESLAGITGGERTGCTETTTDVFIECALFDPVRIARSGRYHQISTDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 R RFERGVD + L+ ++ILSLCGG AS I A R + +++L G Sbjct: 358 RQRFERGVDQALLPAALEAATAMILSLCGGEASAITSAGVEPSWQRDATLRFARLEQLGG 417 Query: 417 IDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADL---------------- 459 + VP ++++ LERLGF ++ + VSVPSWR D+ ++ L Sbjct: 418 LAVPPDEAVGALERLGFGILSRNAEHVTVSVPSWRNDMAVRSPLDLPSTCDAARAATLAE 477 Query: 460 -----------VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +EE+LR+ G+D I + LP+ +LS +Q+R +R LA+ +M Sbjct: 478 AAAEAEPEAELIEEVLRLRGMDAIPACSLPVDHAVPAASLSPRQTRAALARRELAASGLM 537 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E V +SF++ E + FGG + L +LNPI++D+ +R + + L A RN R + + A Sbjct: 538 ECVTFSFVAHEVAARFGGTEESLRLLNPIASDLDQLRPTPVATLALALARNAARGLPEAA 597 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 +FEV + + GQ +AA I G + R W E R +D DAK S+ Sbjct: 598 LFEVGPAFSAN---GQSQVAAAILGGM-----TPRHWL----EPARSLDAMDAKGYLFSL 645 Query: 629 IEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + V +DSL + AP WYHPGRSG+++ + VLG FGE HP +++ L +P F Sbjct: 646 LSALGVPMDSLSVTADAPGWYHPGRSGVVRQGPKTVLGTFGELHPALIEAMDLPSPTIAF 705 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDD 746 E++L+++P +++R + L P+ RD AF+ + A L+ I+ DR LI Sbjct: 706 ELFLEAVPEPKRRR---RAAPTLPPFQPLTRDFAFLAQRGTSADALLRAIRGADRTLITR 762 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++FDV+ G L EG S+ ++V +QPL+ + D +I + +IV K A LR Sbjct: 763 VSLFDVYDGDKLPEGMISLGVEVTLQPLERSLTDAEIEAISAKIVAAAGKAVGATLR 819 >gi|71083149|ref|YP_265868.1| phenylalanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] gi|91208126|sp|Q4FNH4|SYFB_PELUB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71062262|gb|AAZ21265.1| phenylalanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062] Length = 802 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 306/815 (37%), Positives = 478/815 (58%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK T +WLKDHLDT ++ +I D LT IGLEVE VD++ L F I K+L E++PD D Sbjct: 1 MKITTAWLKDHLDTKLNENQIIDKLTDIGLEVEGVDSQSGELDQFVIAKILKAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + ++VVCGAPN + GLL ++APPG+ +P++ M + V KIRG+ S GM+ Sbjct: 61 RLRVCDVDIGSGKSVKVVCGAPNAKEGLLTIYAPPGAVVPKSQMKLVVSKIRGVTSYGML 120 Query: 119 CSEKELMLSDDSASIMEL---PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CSE EL LS++S I EL + VG L+ +ID+S+TPNR+DC+GVRGIA Sbjct: 121 CSESELNLSNESDGITELLPEKYNKKVGENYFPKKNLN--VIDISITPNRADCLGVRGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AAG G+L + +K + + + C F C +KGV+N +P W++ Sbjct: 179 RDLAAAGAGRLINQKEKKLDKKNKQTISVKIENEKNQACISFGSCLIKGVKNTESPEWLK 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++ A+G + ISA+VDITNY+ D P H +D +I + VR + GE ALDN+EY Sbjct: 239 DKIIALGQKPISAIVDITNYIMFDLNRPLHAYDVDKIDKAIVVRNSKKGETFEALDNKEY 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + VI+ + + GIIGG G + +T +VL+E A + P +I +S K L I TD Sbjct: 299 KLEDEMCVISDASGVLGLGGIIGGTRTGTELDTKNVLIESAYFSPRSIRKSSKILNIDTD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +++RFERG+D + L+ +LI +CGG S+ I + K + + F S ++++ Sbjct: 359 AKFRFERGIDPLSIDQGLERAANLIQEICGGEVSEFDIQKIEDVKKKSLKFDPSLFEKIT 418 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-S 474 G ++ I++ ++IL+ LGF + + +PSWR D+ ++ D+VEE++RI G DQIK Sbjct: 419 GFNIDIKEMIKILDNLGFEIKENKGILDAVIPSWRPDISQEVDVVEELVRIKGYDQIKII 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 EP +V K+ L+L+Q +++R +AS+ E + WSF + + LF +E++I+ Sbjct: 479 EP---EKVRKKQTLNLKQKLFHFLQRSIASKGYFEAITWSFTDSKINQLFIENNKEIKII 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPIS+D++ +R+S+ L+ +N+ R D + FE+ + P Q+ +A G+R Sbjct: 536 NPISSDLNVLRSSIFSNLIIHLNKNLGRGFKDLSFFEIGPTFLGSEPGEQQTVATGLR-- 593 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADAL-SVIEPFVSLDSLRFESGAPSWYHPGRS 653 SG+L E+ R +D+FD K+D + S++E + D L + APS+YHPG+S Sbjct: 594 ------SGKLARQSWLEKERLIDVFDVKSDVIKSLVEAGYNKDKLYIDDEAPSYYHPGKS 647 Query: 654 G--IIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G + E V+ +FG+ HP IL + + GFE++LD++ +K K Sbjct: 648 GRIFLNKGKEKVVAFFGDIHPGILKKLDIKVESLVGFEIFLDNLKQPKKSLKDQKTQYKY 707 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD AF++D++ L+ I NVD+ LI V VFDV++G ++ EGKKS+A+ V Sbjct: 708 SDFQKSERDFAFVLDKNFKVQELIETISNVDKELIKSVKVFDVYEGANIPEGKKSIALNV 767 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +IQPL+ T +DD+ + I+ V KT A +RS Sbjct: 768 IIQPLEKTLTEDDLNKINQLIISAVESKTGAKIRS 802 >gi|58038736|ref|YP_190700.1| phenylalanyl-tRNA synthetase subunit beta [Gluconobacter oxydans 621H] gi|81352580|sp|Q5FUA2|SYFB_GLUOX RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|58001150|gb|AAW60044.1| Phenylalanyl-tRNA synthetase beta chain [Gluconobacter oxydans 621H] Length = 822 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 314/846 (37%), Positives = 477/846 (56%), Gaps = 68/846 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+LSWL++HLD S+E+IC L IGLEVE V+N + L F K++ R+PD D Sbjct: 1 MKFSLSWLREHLDFTASVEEICARLNIIGLEVEGVENPADRLVGFRTAKIVEAHRHPDAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+ G +++QVVCGAPN R GL ++A PG+ +P ++ + KIRG +S GM Sbjct: 61 RLQVCRVAAGAGFEDVQVVCGAPNARAGLHVIFATPGTYVPGLDITIKKGKIRGQDSGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL + ++S I EL AP+G + Y EL DP+I++++TPNR D + +RGIA D Sbjct: 121 LCSLRELGIGEESNGIAELSETAPIGESYAAYAELDDPVIEIAITPNRGDALSIRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESI------PLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 L A G+G LK P +E++ PL K + C ++GV+N +P Sbjct: 181 LAAGGIGHLK------PWLTEAVEGDFPSPLTWK---TEHPACPYIVGRVIRGVKNGPSP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 +W+++RL++VG++ ISALVD+TNY++ D G P HVFD +++ D LTV A E L Sbjct: 232 DWLQRRLESVGVKPISALVDVTNYLTYDLGRPLHVFDVAKLKGDTLTVTHAAR-ETFTGL 290 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +EY L ++++I + +QS+AG+IGG+ +G D+NT DV VE AL+DP+ IA +G+ L Sbjct: 291 DGREYVLGTEDMIIVDEAGVQSLAGLIGGESSGVDENTIDVFVESALFDPVRIALTGRRL 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 I TD+R RFERG+D ++ L+ +I LCGG S+I A + R Sbjct: 351 AIHTDARQRFERGIDPAQVLNGLEAATVMIRDLCGGEVSEITEAGALPDWKRTARLRFER 410 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDV---------------- 453 +K L G+D+ +D++R LE LGF V D VPSWR D+ Sbjct: 411 LKTLGGVDIAADDTVRSLEHLGFEVTERTEDAATFLVPSWRNDIASGQVLAQAPTLDEDV 470 Query: 454 -----------EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 E + DL+EE+LR+YG+D + + LP T V ++ Q+R ++RV Sbjct: 471 ASRAASHVQAMEAECDLLEEVLRLYGLDNVPAVALPQTTVVPAPAVTPLQARAALLRRVC 530 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 A+R + E V +SF++++ + LFG +LNPI+ D+ +R + L L +A RN+ R Sbjct: 531 AARGLTETVGFSFVAQDDAALFGDVPETQHLLNPIATDLDQLRPTPLINLARALSRNLAR 590 Query: 563 AI---ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 + + A+FEV ++ GQ AG+R G L + + L+ Sbjct: 591 GLGLSGEGALFEVGPSFDAT---GQHLRLAGLRAG---------LTAREPGVAAHEATLW 638 Query: 620 DAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 +AKAD + + V +L + AP +YHPGRSG ++ ++VLG FGE HP + Sbjct: 639 EAKADLTAALVALGVPEAALSVTADAPGFYHPGRSGQVRQGPKMVLGTFGELHPRVARAL 698 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 GLS + FEVYLD +P+ + KR K LS L PV+RD AF+ + ++ + Sbjct: 699 GLSGTVVAFEVYLDQVPLPKAKR---KAAPVLSPLQPVRRDFAFVAGPDVEIQAVLKAAR 755 Query: 739 NVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 DR L+ DV +FDVF+G SL EG +S+ ++V++QP ++ D + + + V+K Sbjct: 756 MADRNLVQDVRLFDVFEGGSLPEGHRSLGVEVVLQPQSESLTDTQLEAVSKSVEAAVLKA 815 Query: 798 TNAVLR 803 T AVLR Sbjct: 816 TGAVLR 821 >gi|149187105|ref|ZP_01865410.1| phenylalanyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] gi|148829257|gb|EDL47703.1| phenylalanyl-tRNA synthetase beta subunit [Erythrobacter sp. SD-21] Length = 796 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 318/804 (39%), Positives = 462/804 (57%), Gaps = 21/804 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+L WLK L+TD S+ I L IG EVE + D + L F + KVL+ ++PD D Sbjct: 1 MKFSLEWLKYFLETDASVSDIAAALNRIGHEVEGIEDPADKLEGFRVAKVLTAAKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG+ +QVVCGAPN R G+ GV PG+ +P N M + IRG+ES GMM Sbjct: 61 KLQVLTVDTGEGDPLQVVCGAPNARAGMKGVLGLPGAVVPANGMELRKSAIRGVESNGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L D+ I+ELP DA VG ++Y + S P+ DV++TPNR DC+GV+GIA DL Sbjct: 121 CSVRELELGDEHDGIIELPEDATVGQTFAEYHDAS-PVFDVAITPNRPDCMGVQGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWMRQR 237 AAGLG + + +S +EI+ DD C F ++GV N +P WM++R Sbjct: 180 AAAGLGTYLPVEATAIAASGECSVEIR--TDDPEGCPAFYGRVIRGVDNTKPSPEWMQRR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A G R ISALVD+TNY+ L G P+HV+D ++++ + RRA GE + AL+ + Y L Sbjct: 238 LIAAGQRPISALVDVTNYLMLAFGRPAHVYDLAKLTGAVVARRATIGETVEALNEKTYTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D + IAGI+GG+H+G + TTDVL+E+A +DP I +G+ LG+ +D+R Sbjct: 298 DDSMTVIADDKGVHDIAGIMGGEHSGATEGTTDVLLEIAYFDPERIGVTGRKLGLASDAR 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERGVD + + L + LIL CGG A+++ A + + I F +RL + Sbjct: 358 TRFERGVDPEFLDDGLAILTELILKTCGGEATEVVRAGTPPSEAKTIKFDPRLTERLGAL 417 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V E+ ILE L F V D + VS P R D+E ADLVEE++RI+G+D++KS PL Sbjct: 418 GVAQEEQRAILEALDFRVA---DDWTVSCPPRRHDIEGPADLVEEVVRIHGIDEVKSTPL 474 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P + Q R R ++R A+R + E + WSF+ ++ F G + NPI Sbjct: 475 PRRPGVALPTATPLQQRERKLRRAAAARGLNEAITWSFLPTSEAEHFADGAELWVLENPI 534 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGS 595 S DM MR SL+PGLL A RN DR +FE+ Y D +K + G Sbjct: 535 SEDMKAMRPSLIPGLLSAAKRNADRGADGARLFEIGRRYFRGKDGASDEKPTLGVVLSG- 593 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSG 654 E + R W S + +F D +DAKA+A++++E V + +L A +HPG+S Sbjct: 594 ---EKTPRGWD--SGKAAKF-DAYDAKAEAVALLEAAGVPVGNLMVMGEAGDQFHPGQSA 647 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 ++ + +L FG HPN L F + P+ E++LD+I +++K + +L Sbjct: 648 TLRLGPKNILARFGAIHPNTLKAFDIDGPVMAVEIFLDAI-LAKKGGGFARAAYSPPALQ 706 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 + RD AF+V + AG LV ++ + I D VFDVF G+ + EGKKSVA++V++QP Sbjct: 707 AITRDFAFLVPAELAAGELVKAVRGAAKKAIVDARVFDVFAGQGVPEGKKSVAVEVVLQP 766 Query: 774 LKDTFRDDDIRILMDRIVENVVKK 797 + +F D++I+ + D IV N K+ Sbjct: 767 SEKSFTDEEIKAISDNIVRNAAKQ 790 >gi|326402599|ref|YP_004282680.1| phenylalanyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] gi|325049460|dbj|BAJ79798.1| phenylalanyl-tRNA synthetase beta subunit [Acidiphilium multivorum AIU301] Length = 827 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 323/842 (38%), Positives = 476/842 (56%), Gaps = 53/842 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK HLDTD SL+ I +TL++IGLEVE + +R A L+PF I +V+ ++P+ D Sbjct: 1 MKFTLSWLKTHLDTDASLDAIAETLSAIGLEVESIADRGASLAPFRIARVIEATQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G E+ VVCGAPN R G+ V+APPGS +P + + V +IRG+ S GM+ Sbjct: 61 RLRVCRVDPGDGTEVSVVCGAPNARTGMRAVFAPPGSFVPGTGITLKVGEIRGVPSAGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL L D I++LP DAPVG + + L DP+I++ +TPNR D VRG+A DL Sbjct: 121 VSERELGLGDSHDGIIDLPDDAPVGTPYARWAGLDDPVIEIGVTPNRGDAFAVRGVARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK ++ + + + ++ C V+GVRN +P+W+++RL Sbjct: 181 AAAGLGTLKPWAPPPIAAAGASSIAWQNAYPEA--CPWVLGRTVRGVRNGESPDWLKRRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 ++VGLR I+ALVDITN+ +LD G P HVFD +I+ D LT+RR +GE L ++ Sbjct: 239 ESVGLRPINALVDITNFFTLDLGRPLHVFDVGKIAGDALTLRRG-AGESFRGLHGRDVTA 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D+ VIA QS+AGI+GG+ GCD+ T DV +E AL+D + IA +G+ GI +D+R Sbjct: 298 TADDCVIADAAGAQSLAGIVGGEATGCDETTRDVFIECALFDRVRIALTGQRTGIHSDAR 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERG+D + L ++++ LCGG AS+I A R + Sbjct: 358 QRFERGIDFALLPAALDAATAMVIELCGGAASEITEAGAKPDWHRTATMRFERLASFGHS 417 Query: 418 DVPIEDSLRILERLGFS-VIGEYDKFEVSVPSWRQD------------------------ 452 + + + IL+RLGF+ V + V+VPSWR D Sbjct: 418 TITPDRAADILDRLGFAGVARDAASITVAVPSWRNDIAAADLPGGSALDQHGGLAAATAE 477 Query: 453 --------VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +E + DL+EE+LRI G+D+I+ LP +L+ +Q+RT +RVLA+ Sbjct: 478 AARLGARTIEPEVDLIEEVLRIDGLDRIEPVSLPGAAPVPSASLTPRQARTVRARRVLAA 537 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 R M E V +SF+ + + FG L + NPI+AD+ MR + L + A RN R Sbjct: 538 RGMAECVTFSFLDRATAGRFGATPATLALKNPIAADLDQMRPTPLATIALAAARNAARGH 597 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 D A+FE+ Y + +P+GQ +AAG+R G + + W E R DL+DAKAD Sbjct: 598 GDIALFEIGPAYRDVSPDGQDLVAAGLRAGRTPLS-----WV----EPARPADLWDAKAD 648 Query: 625 ALSVI-EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 A++V+ E V LD++ + AP+ YHPGRSG ++ + LG+FG HP++ L Sbjct: 649 AIAVLGELGVPLDAVTVTADAPAHYHPGRSGTLRQGPKTRLGWFGALHPSLCAALDLPEG 708 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 FE+ L +I +++R K L P++RD AFI D + A ++ K +R Sbjct: 709 SVAFELDLGAIADPKRRR---KAAPSLPQFQPLRRDFAFIADATVTAEAVLRAAKGAERT 765 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 LI +V +FD + G+ L EGK S+A+ V +QP + + D +I + +IV V K T A L Sbjct: 766 LIANVALFDRYAGEKLPEGKVSLAVAVTLQPRETSLTDAEIEAVSAKIVAAVAKATGATL 825 Query: 803 RS 804 R Sbjct: 826 RG 827 >gi|254455309|ref|ZP_05068738.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] gi|207082311|gb|EDZ59737.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Pelagibacter sp. HTCC7211] Length = 802 Score = 540 bits (1391), Expect = e-151, Method: Compositional matrix adjust. Identities = 300/812 (36%), Positives = 473/812 (58%), Gaps = 18/812 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK T WLK+HLDT + KI + LT +GLEVE V+ + L F + K+L VE++P+ D Sbjct: 1 MKITSDWLKEHLDTKLDENKIIEKLTDVGLEVESVEKQGGELDEFIVAKILKVEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D GK ++VVCGAPN + GL ++APPGS IP+N M + V KIRG+ S GM+ Sbjct: 61 KLRVCDVDIGKENPVKVVCGAPNAKEGLFTIYAPPGSVIPKNQMKLVVSKIRGVSSYGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYL-ELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSE EL LSD+S I EL + +Y + + +ID+S+TPNR+DC+GVRGIA D Sbjct: 121 CSESELNLSDESDGITELSSNDFKNKIGDNYFPKKNSNVIDISITPNRADCLGVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAG GKLK+ + + +K + +++ C F C + GV+N +P+W++++ Sbjct: 181 LAAAGSGKLKDFKENELKKDGKQTVSVKIENEENQACTIFGSCLITGVKNIESPDWLKEK 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 + ++G + ISA+VDITNY+ D P H +D +I + VR + E ALDN+EY L Sbjct: 241 IISIGQKPISAIVDITNYIMFDLNRPLHAYDVDKIDKGIIVRNSKKNETFTALDNKEYKL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VI+ + + GIIGG +G + +T +VL+E A + P +I +S K I TD++ Sbjct: 301 DEGMCVISDASGVLGLGGIIGGTRSGTELDTKNVLIESAYFLPRSIRKSSKICNIDTDAK 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERG+D + LK +LI +CGG SDI I Y+ + + F ++++GI Sbjct: 361 FRFERGIDPLSIEQGLKKASNLIQEICGGKVSDIDIQNIKKYENKSLEFNPKIFEKVTGI 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + ++ ++IL LGF + ++ +PSWR D+ ++ D+VEE++RI G + I E + Sbjct: 421 KIEKDEMMKILNDLGFVIKENQKNLQLKIPSWRPDISQEIDVVEELIRIKGYEHI--ELI 478 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 +V K L+ +Q +++R +AS+ +E + WSF + LF +E++I+NPI Sbjct: 479 EPQKVRQKETLNKKQKLFHFLQRAVASKGYLEAITWSFTDSRINQLFLEKNKEIKIVNPI 538 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S+D+ +R+S+ L+ +N+DR D +IFE+ + P Q+ + G++ Sbjct: 539 SSDLDVLRSSIFSNLIIHLNKNLDRGFKDLSIFEIGPTFLGKKPGEQQTVVGGLK----- 593 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADAL-SVIEPFVSLDSLRFESGAPSWYHPGRSG-- 654 SG+++ E+ R VDLFD K+D + S++E S ++L F+ PS+YHPG+SG Sbjct: 594 ---SGKIFRQSWLEKERLVDLFDVKSDVIKSLVEAGYSKENLYFDIETPSYYHPGKSGRV 650 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + E V+ YFG+ HPN+L + + GFE++LD+I +K K S Sbjct: 651 FLNKGKEKVVAYFGDIHPNVLKKLDIKIEALVGFEIFLDNIKQPKKSLKDQKTKNKFSDF 710 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +RD AFI+D+ L+ II NVD+ LI V VFDV++GK++ + KKS+A+ V IQ Sbjct: 711 QKSERDFAFILDKDFQVQELIEIIANVDKNLIKSVKVFDVYEGKNIPDNKKSIALNVTIQ 770 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T +DD+ + I+ V K +A +RS Sbjct: 771 SSEKTLNEDDLNKINQTIITAVESKLDAKIRS 802 >gi|330994704|ref|ZP_08318627.1| Phenylalanyl-tRNA synthetase beta chain [Gluconacetobacter sp. SXCC-1] gi|329758345|gb|EGG74866.1| Phenylalanyl-tRNA synthetase beta chain [Gluconacetobacter sp. SXCC-1] Length = 820 Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust. Identities = 313/841 (37%), Positives = 482/841 (57%), Gaps = 58/841 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+LSWL++HL+T +L++I TL +IGLEVE V+N AL+ F +++ ++P+ D Sbjct: 1 MKFSLSWLREHLETTATLDEITATLNTIGLEVEGVENPAAALAAFRTARIIEAAQHPNAD 60 Query: 60 -CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + ++D G+ + +QVVCGAPN R GL ++APPG+ IP + + + K+RG S GM Sbjct: 61 RLRVCQVDAGEGFERVQVVCGAPNARTGLHVIFAPPGTFIPASGITIKAGKLRGETSGGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL + ++ + I ELP G + L DP+ID+++TPNR D + VRGIA D Sbjct: 121 LCSLRELGIGEEDSGIAELPEGTATGQSYPLFAGLDDPVIDIAITPNRGDALAVRGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AAGLG L+ S P+ + ++ C ++GVRN +P+W+++R Sbjct: 181 LAAAGLGTLRPWRPGTVESRFETPITWRITYPEA--CPWVLGRAIRGVRNGPSPDWLKRR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYD 296 L+++GLR +SALVDITN+ + D G P HVFDA RI LT+ R +GE ALD E+ Sbjct: 239 LESIGLRPVSALVDITNFFTFDLGRPLHVFDADRIMGGELTICRG-AGETFTALDGSEHV 297 Query: 297 LSPDNVVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 ++PD+ VIA DGR +QS+AGI+GG +G D TT V VE AL+DP+ IA +G+ + +D Sbjct: 298 MTPDDCVIA-DGRGVQSLAGIMGGAGSGVSDTTTTVFVECALFDPVAIALAGRRHNLHSD 356 Query: 356 SRYRFERGVDLQGMIP-VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 +R RFERGVD Q + P L+ + +IL LCGG A + A R+ + ++ + Sbjct: 357 ARQRFERGVD-QALPPAALEAVTRMILDLCGGEAGSVVSAGAEPAWQRQAHLDFARLETI 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDV------------------- 453 G+ + ++ +L+ LGF+V E D V VP WR D+ Sbjct: 416 GGLVEEPDHAVHLLQGLGFTVR-ECDARHVVVDVPPWRNDIATPMLLDQQADLPPARAQT 474 Query: 454 --------EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 + + DL+EE+LR+ G+D + + LP+ + +QSR ++R LA+ Sbjct: 475 AAEGAMALDPEVDLIEEVLRLRGLDSVPAVSLPVGNAVPLPAFTPRQSRIASLRRQLAAG 534 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 ++E V +SF++ EQ+ FG EL +LNPI+AD+ MR + L LL A NV R Sbjct: 535 GLLETVGFSFVAMEQAAEFGETPPELHLLNPIAADLDQMRPTPLVNLLAAVRGNVARGYP 594 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK-AD 624 D +FEV + PEGQ +AAGIR G S RL + R VDL+ K Sbjct: 595 DLGLFEVGPAF---GPEGQVLVAAGIRSGH-----SPRL----PGQAARPVDLWQVKADA 642 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 ++ +++ L AP++YHPGRSG+I+ ++VLG+FG+ HP +L G+ P+ Sbjct: 643 LSALAAAGAAMEGLSMTPDAPAFYHPGRSGVIRQGPKLVLGHFGQLHPALLATRGIDVPV 702 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-L 743 C F +Y D++P ++KR K LS+ P++RD AF+V +PA L+ ++ +R L Sbjct: 703 CAFMLYPDAVPEPKRKR---KAPPALSAFQPLRRDFAFVVAADVPAEKLLRAVRGAERNL 759 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +FDV++G + G +S+ +++ +QP+ T D +I + +R++ K NAVLR Sbjct: 760 IVAANLFDVYEGDKIPAGHRSLGVEITLQPMDGTLTDAEIEAVCERVLAAAQKSCNAVLR 819 Query: 804 S 804 Sbjct: 820 G 820 >gi|16125295|ref|NP_419859.1| phenylalanyl-tRNA synthetase subunit beta [Caulobacter crescentus CB15] gi|221234032|ref|YP_002516468.1| phenylalanyl-tRNA synthetase subunit beta [Caulobacter crescentus NA1000] gi|30316279|sp|Q9A9E5|SYFB_CAUCR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|13422339|gb|AAK23027.1| phenylalanyl-tRNA synthetase, beta subunit [Caulobacter crescentus CB15] gi|220963204|gb|ACL94560.1| phenylalanyl-tRNA synthetase beta chain [Caulobacter crescentus NA1000] Length = 799 Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust. Identities = 312/800 (39%), Positives = 471/800 (58%), Gaps = 32/800 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+T ++ +I +T GLEVE V D L+PFT+ K++ R+P+ D Sbjct: 1 MKFTLSWLKDHLETTATVPEIVAAMTMAGLEVEHVIDPATKLAPFTVCKIVEAARHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DT ++ ++VCGAPN R GL ++AP G+ +P ++ + + +RG+ S GM+ Sbjct: 61 RLQVCQVDTVDGRK-EIVCGAPNARPGLTTIYAPIGAYVPGLDVTLVEKPVRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL VG D L L + +ID +TPNR D +GV GIA DL Sbjct: 120 CSAAELEYASESDGIMELEGSLAVGTPAVDALGL-EAVIDFEVTPNRPDWLGVAGIARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+G LK+++I+ + P+ + D C FA ++GV+N +P W++ RL Sbjct: 179 AAAGVGTLKDLSIAPIAGTYPSPISVTVD---GEACPAFAGRYIRGVKNGPSPKWLQDRL 235 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEK----ILALDNQ 293 A+GLR I+ALVD+TN +S DR P HV+DA ++S ++ R GE ++ALD + Sbjct: 236 TAIGLRPINALVDVTNLISYDRARPLHVYDAHKLSGTQISTRLGRHGEHGDEHLIALDGK 295 Query: 294 EYDLSPDNVVIA-SDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Y+L+P+ VIA ++G R + G++GG+ GC ++T DV VE A ++PI IA++G+ G Sbjct: 296 TYELTPEMCVIADANGERPIGLGGVMGGESTGCSEDTVDVFVESAWFEPIRIAQTGRTTG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 I +D++YRF R VD ++P ++ LIL LCGG S++ + P+ F V Sbjct: 356 IASDAQYRFARTVDTGSLVPGIELATKLILELCGGEPSEVVYVGEVPAAPKGFAFDPDYV 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +LSG+ V E + +IL LGF V+ + V+ P++R+DVE KADLVEE+ RI G Sbjct: 416 GQLSGLAVTPEKTHQILAALGFDVV-LGSPWTVTPPTFRRDVEGKADLVEEVARIAGYGA 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + S PLP L+ +Q+R R +R LA+ E V +SF +++ + LFGGGQ L Sbjct: 475 LPSTPLPEVPRAVGGILTAKQARARAARRALAAAGYAEAVTFSFTNRKTASLFGGGQDVL 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPI++++ MR SLLP L++A GRN + AD A+FE+ + D P Q+ + + I Sbjct: 535 VLANPIASELDCMRPSLLPNLIEAAGRNARQGFADAALFEIGPTFHGDKPADQRTVVSAI 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD----ALSVIEPFVSLDSLRFESGAPSW 647 + R W DK+ + D+F KAD + P SL + + A SW Sbjct: 595 LAPK-----APRGW-DKAAQG----DVFTVKADLLALLEELGAPVASLQTA--QGSASSW 642 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGRS ++ + V+ FGE HP +L ++ P+ GFE+ L++IP +KK KTK Sbjct: 643 WHPGRSARLQLGPKAVMAEFGEIHPAVLKALDVAGPVFGFEITLEAIPEPKKKSIKTKPA 702 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 S+L P+ RD AF+V++ AG LV D+ LI VFDV++G + +G KSVA Sbjct: 703 FSPSALMPLTRDFAFLVEKAKAAGDLVKAAAGADKALITAARVFDVYEGPGVPDGFKSVA 762 Query: 767 IQVLIQPLKDTFRDDDIRIL 786 I+V++QP + T D +I L Sbjct: 763 IEVVVQPREATLTDAEIEAL 782 >gi|330813587|ref|YP_004357826.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] gi|327486682|gb|AEA81087.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Pelagibacter sp. IMCC9063] Length = 796 Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust. Identities = 318/817 (38%), Positives = 482/817 (58%), Gaps = 33/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M TL+WLK +L T + E+I + LTSIGLEVE + + + LS F I K+L ++PD D Sbjct: 1 MNITLNWLKKYLKTKSTTEQIGEKLTSIGLEVESISSAKSNLSNFKICKILKAIKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +D G + +VVCGA N + L+ V+A PG+ IP N M ++V KIRG+ES GM+ Sbjct: 61 KLKICDVDIGDGKITKVVCGATNAQDNLITVYASPGTVIPSNGMKLSVAKIRGVESFGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL +SD S IMEL +G + E DP+ID+S+TPNRSDC+GVRGIA DL Sbjct: 121 CSESELNISDSSDGIMELDSKRKIGKNF--FKENLDPMIDISITPNRSDCLGVRGIARDL 178 Query: 179 VAAGLGKL--KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A+G G + I S ++I +E+K D S C F C ++GV+N +P+W+++ Sbjct: 179 AASGEGTFLKSKKEIIKVTSKKAISVEVKKD----SGCYQFGSCYIEGVQNKESPDWLKK 234 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 L+++G +SISA+VDITNYV +D P H +DA++IS + VRR+ E ALDN++Y+ Sbjct: 235 DLESIGQKSISAIVDITNYVMIDMNRPLHAYDANKISGKIIVRRSKKSEHFEALDNKKYE 294 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS ++ VIA ++ + GIIGG G + +TTD+++E A +DPI IA+S K LG++TD+ Sbjct: 295 LSAEDCVIADQSKVLGLGGIIGGVSTGTEMSTTDIILEAASFDPITIAKSSKKLGLLTDA 354 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +YRFERGVD + L LI +CGG S I +A YK +KIVF + K+L G Sbjct: 355 KYRFERGVDPMSIEEGLVKASKLIHEICGGKISSIKVAGKSNYKEKKIVFTIANFKKLIG 414 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ++ +S ILE LGF V + + E+ VPS+R D+ ++ D++EE++RI G D I Sbjct: 415 FEISSTESKSILEDLGFGVKNKKNTLELIVPSFRPDINQEVDIIEELIRIKGYDNI---- 470 Query: 477 LPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 PLT+ + K L+ Q + +R +AS +E V WSF + + F ++L + Sbjct: 471 -PLTEPDRDILKPTLNFHQKIFHHTQRSIASLGYLETVTWSFTNSKIDDFF--SDKKLRL 527 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 +NPIS+D+ +RTS+ LL NVDR D +FEV V++ P Q A+GI Sbjct: 528 INPISSDLDTLRTSIFSNLLIHAKNNVDRGHKDLMLFEVGPVFKGKQPGQQNIFASGIVM 587 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFESGAPSWYHPGR 652 G IE + + + + + +D+K+D + + I+ + +L ES + S +HPGR Sbjct: 588 GDK-IEKNWMM-------KIQPFNAYDSKSDVVQILIDLGIDSSNLIVESKSNSSFHPGR 639 Query: 653 SG--IIKTSAEIVLGYFGEFHPNILDFFGLSN-PICGFEVYLDSIPISQKKRTKTKKVVH 709 SG + ++ +L FGE +P I++ L + CGFEVYLD+I ++ + K+ Sbjct: 640 SGSFYLGSNKGPLLASFGEINPIIVNQLELDHYSPCGFEVYLDNISEPKRNQKDAKQNYV 699 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S V RD AFIVD+ I A ++ +K D LI ++ +FDV++G+++ +GKKS+A Sbjct: 700 VSKFQAVDRDFAFIVDKSISANEIIKEVKKCDPLLITNINIFDVYEGENIEQGKKSIAFS 759 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + +Q ++ T + I +I+ V LRSS Sbjct: 760 IKLQSMEKTLDEKTIEETSQKIISAVQSHVGGTLRSS 796 >gi|58584718|ref|YP_198291.1| phenylalanyl-tRNA synthetase beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|75497834|sp|Q5GSH5|SYFB_WOLTR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|58419034|gb|AAW71049.1| Phenylalanyl-tRNA synthetase beta subunit [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 792 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 316/828 (38%), Positives = 471/828 (56%), Gaps = 59/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+FTLSWL +HL+T+ SLE+I D LT IGLEV+ V + L+ F + KVL V +P++D Sbjct: 1 MRFTLSWLLEHLETNASLEEITDKLTHIGLEVKDVVDNTKLAGFIVAKVLEVTPHPNVDK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++D G + +Q+VCGA NVR GL V A GS +PE+N + KIRG+ S G++C Sbjct: 61 LKLCKVDNGS-KILQIVCGANNVREGLKTVLASLGSTLPESNFTIKPTKIRGVLSEGILC 119 Query: 120 SEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S ELML+ + S I+EL D VG + + DP+ID+++T NR DC+ V GIA DL Sbjct: 120 SASELMLAQEKSKGIIELSDDYKVGNKFFN----CDPVIDINVTTNRGDCLSVHGIARDL 175 Query: 179 VAAGLGKLKEINISCPL----------------SSESIPLEIKFDLDDSSLCKGFAMCCV 222 A G+G L + S + S SI +++ +D S G + Sbjct: 176 AATGIGTLNSLIYSSAIPAHDTGIQDRSKSGMTRSSSINVKV---IDGESFISG---VYI 229 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 VRN +P W++ RL++VG+RSISA+VDITNY+ + G P H +DA +I L VR+A Sbjct: 230 SNVRNKESPRWLKDRLESVGMRSISAIVDITNYIMMSFGRPMHAYDAKKIEGKLIVRKAN 289 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +GEK L+ +EY L+ D VI+ + I +IAGIIGGK + C TTDV +E A ++PI+ Sbjct: 290 NGEKFTGLNGKEYLLNNDISVISDNNNIHAIAGIIGGKCSKCTLETTDVFLESAWFNPIS 349 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 + +S + L I TDS YRF R VD ++ L +I+ LCGG AS++ A ++ Sbjct: 350 VTKSSRQLNISTDSSYRFARSVDPGFILDGLHFAAQMIVDLCGGKASNVVFAGSLDEADT 409 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 K+ F +V + + V ++ IL +LGFS + + + V VPSWR DV ADLVE Sbjct: 410 KVSFDYQDVNKFGSVSVLPDEMFDILTKLGFSTDKKTENNWNVKVPSWRSDVTIPADLVE 469 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E++RIYG D+IK EPL N+ ++ + ++ ++ SR EV WSF+S+ + Sbjct: 470 EVVRIYGYDKIKEEPLI-------DNVEVEINTHDNLRVLMISRGFHEVFTWSFMSESIA 522 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 FG + I NP + + + MR S++P LL+ T N+ ++D AIFE+ VY D+ Sbjct: 523 EKFGYSNKLFIIDNPFNNNFNIMRPSIVPNLLQVTADNIVHGMSDLAIFEIGPVY--DSL 580 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 + KY +GIR G++ R +D+FDAKAD ++ +E F VS +L Sbjct: 581 DQPKYSLSGIRTGNN--------LPRNHYNTDRKIDVFDAKADLIAALELFNVSYGNLTI 632 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD---SIPIS 697 E +YHPG+SG + + GYFGE HPNILD F + + GFE+ L+ ++P+S Sbjct: 633 ERAEKEYYHPGKSGTLSFKNK-ATGYFGELHPNILDLFDIKQKVVGFEMILENMGNLPVS 691 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKS 757 ++K K VKRD AFIV++ + G ++N++K LI +V VFDV+ G + Sbjct: 692 REKFIDYKH-------QSVKRDFAFIVNRDVEVGKIINMVKKSSELITEVFVFDVYHGNN 744 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + K S+A+ V T +++I+ IV V K T +LR + Sbjct: 745 MEPNKMSIALSVTFCSPTHTLIEEEIQKESSAIVNLVHKNTGGILRYT 792 >gi|42520299|ref|NP_966214.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] gi|66773922|sp|Q73HW5|SYFB_WOLPM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|42410037|gb|AAS14148.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila melanogaster] Length = 779 Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust. Identities = 321/811 (39%), Positives = 468/811 (57%), Gaps = 41/811 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWL ++L+T+ SLE+I D LT IGLEVE V + L+ F + +VL V +P+ D Sbjct: 1 MKFTLSWLLEYLETNASLEEITDKLTHIGLEVEDVIDNSRLTGFIVAEVLEVVPHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++D G + +Q+VCGA NVR G+ V A GS +PE++ + KIRG+ S GM+C Sbjct: 61 LKLCKVDDGS-KILQIVCGANNVREGMKTVLASLGSTLPESDFTIKPTKIRGVLSEGMLC 119 Query: 120 SEKELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S EL L ++S I+EL D VG + + DP+ID+++TPNR DC+G+ GIA DL Sbjct: 120 SASELALVQEESEGIIELSDDYKVGDKFFN----CDPVIDINVTPNRGDCLGIYGIARDL 175 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G LK ++I SS + P++++ D S G + V+N +P W++ RL Sbjct: 176 AATGIGTLKTLSIPQLTSSINSPIDVEV-TDGESFISGIY---IANVKNQESPKWLKDRL 231 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +++G+RSISA+VDITNY+ + P H +DA +I LTVR+A GEK L+ +EY L+ Sbjct: 232 ESIGMRSISAIVDITNYIMISFSRPMHAYDAKKIEGELTVRKANDGEKFAGLNGKEYLLN 291 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D VIA D I IAGIIGGK + C TTD+ +E A +DPI+I +S + LGI TD+ Y Sbjct: 292 KDISVIAGDKNIHGIAGIIGGKCSECTLETTDIFLESAWFDPISITKSSRQLGISTDASY 351 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RF R VD + L +IL LCGG S + A ++ K+ F +V + + Sbjct: 352 RFARSVDPEFTFDGLNLAAKMILDLCGGETSSVVSAGSLDSADTKVSFDYQDVNKFGSVS 411 Query: 419 VPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V ++ L IL +LGFS+ + + + V VPSWR DV ADL+EE+ RIYG D+IK EPL Sbjct: 412 VSPDEVLDILTKLGFSIDKKTEGNWNVQVPSWRPDVTIPADLIEEVTRIYGYDKIKEEPL 471 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P N+ S ++ ++ +R EV+ WSF+S+ + FG + I NP Sbjct: 472 P-------NNVEEVDSTYDNLRILMTNRGFHEVLTWSFMSESTAEKFGYSNKLFIIDNPF 524 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 + + MR S++P LL+ T N+ I+D AIFE+ +Y+ + KY+ +GIR G++ Sbjct: 525 NNSFNIMRPSIMPNLLQVTADNIAHGISDLAIFEIGPIYDGEAQ--SKYVLSGIRSGNN- 581 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 R VD+FDAKAD ++ +E F V+ D+L E YHPG+SG + Sbjct: 582 -------LPRNHYNTDRKVDVFDAKADCIAALEFFNVNCDNLTIEKAEKEHYHPGKSGTL 634 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSL 713 + V GYFGE HPNILD F + + GFEV L++I P+S+KK K Sbjct: 635 SFKNK-VAGYFGELHPNILDLFDIKQKVVGFEVILENIENLPVSRKKFIDYK-------Y 686 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 VKRD AFIV++ + G ++N+IK LI +V +FDV+ G ++ K S+A+ V Sbjct: 687 QSVKRDFAFIVNKDVEVGNIINVIKKSSELITEVLIFDVYHGNNIEPNKMSIALSVTFCS 746 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + +I+ IV V + T LR+ Sbjct: 747 PIHTLTEKEIQKESSAIVNLVCENTGGTLRT 777 >gi|91762420|ref|ZP_01264385.1| phenylalanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] gi|91718222|gb|EAS84872.1| phenylalanine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002] Length = 802 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 306/815 (37%), Positives = 478/815 (58%), Gaps = 24/815 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK T +WLKDHLDT ++ +I D LT IGLEVE VD++ L F I K+L +E++PD D Sbjct: 1 MKITTAWLKDHLDTKLNENQIIDKLTDIGLEVEGVDSQSGELDQFVIAKILKIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + ++VVCGAPN + GLL ++APPG+ +P++ M + V KIRG+ S GM+ Sbjct: 61 RLRVCDVDIGSGKPVKVVCGAPNAKEGLLTIYAPPGAVVPKSQMKLVVSKIRGVTSYGML 120 Query: 119 CSEKELMLSDDSASIMEL---PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CSE EL LS++S I EL + VG L+ +ID+S+TPNR+DC+GVRGIA Sbjct: 121 CSESELNLSNESDGITELLPEKYNKKVGENYFPKKNLN--VIDISITPNRADCLGVRGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AAG G+L + +K + + + C F C +KGV+N +P W++ Sbjct: 179 RDLAAAGAGRLINQKEKKLDKKNKQTISVKIENEKNQACISFGSCLIKGVKNTESPEWLK 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++ A+G + ISA+VDITNYV D P H +D +I + VR + GE ALDN+EY Sbjct: 239 DKIIALGQKPISAIVDITNYVMFDLNRPLHAYDVDKIDKGIVVRNSKKGETFEALDNKEY 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + VI+ + + GIIGG G + +T +VL+E A + P +I +S K L I TD Sbjct: 299 KLEDEMCVISDASGVLGLGGIIGGTRTGTELDTKNVLIESAYFSPRSIRKSSKILNIDTD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 +++RFERG+D + L+ +LI +CGG S+ I + K + + F S ++++ Sbjct: 359 AKFRFERGIDPLSIDQGLERTANLIQEICGGEVSEFDIQKIEDVKKKSLKFDPSLFEKIT 418 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-S 474 G ++ I++ ++IL+ LGF + +V +PSWR D+ E+ D+VEE++RI G DQIK Sbjct: 419 GFNIDIKEMIKILDNLGFEIKENKGMLDVVIPSWRPDISEEVDVVEELVRIKGYDQIKII 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 EP +V K+ L+L+Q +++R +AS+ E + WSF + + LF +E++I+ Sbjct: 479 EP---EKVRKKQTLNLKQKLFHFLQRSIASKGYFEAITWSFTDSKINQLFIENNKEIKII 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPIS+D++ +R+S+ L+ +N+ R D + FE+ + P Q+ +A G+R Sbjct: 536 NPISSDLNVLRSSIFSNLIIHLNKNLGRGFKDLSFFEIGPTFLGSEPGEQQTVATGLR-- 593 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADAL-SVIEPFVSLDSLRFESGAPSWYHPGRS 653 SG+L E+ R +D+FD K+D + S++E + D L + PS+YHPG+S Sbjct: 594 ------SGKLGRQSWLEKERLIDVFDVKSDVIKSLVEAGYNKDKLYIDDETPSYYHPGKS 647 Query: 654 G--IIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G + E + +FG+ HP IL + + GFE++LD++ +K K Sbjct: 648 GRIFLNKGKEKAVAFFGDIHPGILKKLDIKVESLVGFEIFLDNLKQPKKSLKDQKTQYKY 707 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD AF++D++ L+ +I NVD+ LI V VFDV++G ++ EGKKS+A+ V Sbjct: 708 SDFQKSERDFAFVLDKNFKVQELIEVISNVDKELIKSVKVFDVYEGTNIPEGKKSIALNV 767 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +IQ L+ T +DD+ + I+ V KT A +RS Sbjct: 768 IIQSLEKTLAEDDLNKINQLIISAVESKTGAKIRS 802 >gi|103488260|ref|YP_617821.1| phenylalanyl-tRNA synthetase subunit beta [Sphingopyxis alaskensis RB2256] gi|98978337|gb|ABF54488.1| phenylalanyl-tRNA synthetase beta subunit [Sphingopyxis alaskensis RB2256] Length = 798 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 308/795 (38%), Positives = 449/795 (56%), Gaps = 27/795 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK TL WLKDHLD D ++E + TL IG EVE V+N + L+ F + +VL+ E++P D Sbjct: 1 MKLTLDWLKDHLDGDFTVEDVVATLNRIGHEVEGVENPADKLAGFRVARVLTAEKHPQAD 60 Query: 60 -CAILRIDTGKH----QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 +L ++ G + +VCGAPN R GL+GV PG+ +P + M + V +RG+ES Sbjct: 61 KLQVLTVEAGPEVNAGAPLTIVCGAPNARAGLVGVLGLPGAVVPASGMALKVAAVRGVES 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GMMCS +EL L DD I+ELP DAPVG +DY DP+ID+S+TPNR DC+GVRG+ Sbjct: 121 NGMMCSSRELELGDDHDGIIELPEDAPVGASFADYRGAGDPVIDISITPNRQDCMGVRGL 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A DL AAGLG LK +++ + EI+ DD C F + GV N AP WM Sbjct: 181 ARDLAAAGLGTLKPLDVPTITGDGAPATEIR--TDDPEGCPAFYGRTISGVTNGTAPEWM 238 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R+RL+AVG RSISALVDI+NYV D G PSH++D +++S L RRA +GE + AL+ ++ Sbjct: 239 RRRLEAVGQRSISALVDISNYVMFDLGRPSHIYDRAKLSGPLVARRAKAGETVTALNGKD 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y L+ VIA D + IAGI+GG+H+GC T+DVL+EVA + P IA +G+ LG+ + Sbjct: 299 YTLADTMTVIADDRGVHDIAGIMGGEHSGCSAATSDVLIEVAYFTPERIALTGQALGLTS 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+R RFERGVD + + + +L++CGGT S + A + + + + L Sbjct: 359 DARSRFERGVDPAFLDDATAIVTAHVLAICGGTPSTVTRAGTPPVGVKTVDYDPALSATL 418 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ + E IL LGF+VI + ++ V VPSWR+D++ ADLVEE+ RI+G D I S Sbjct: 419 GGVVIAPERQKEILTALGFTVIEQGGRWRVQVPSWRRDIDGAADLVEEVTRIHGFDTIAS 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 LP K + +Q R V+R A+ E V WSFIS++++ FGGG + + Sbjct: 479 VALPRADGVAKPTATAEQLLERRVRRAAAAAGFHEAVTWSFISEQEAAPFGGG--DWSLA 536 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEGQKYMAAGIR 592 NPIS ++ MR SLLPGLL A RN R +FE+ Y +D P MA R Sbjct: 537 NPISEELKVMRPSLLPGLLAAAARNQKRGADSIRLFEIGRRYLSDAEHPTLAVLMAGDKR 596 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP--SWYHP 650 R W ++ + F A + + L+ S +HP Sbjct: 597 A---------RGW--QAGKAAPFDAFDAKAAALALLDAAGAPAERLQVMDAVSEGSIWHP 645 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S ++ + VL FG HP + F + P +++LD+IP +++ + Sbjct: 646 GQSATLRLGPKAVLAEFGALHPALTRHFDVGGPAMAVQIFLDAIP-AKRASGPARAAFAP 704 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQV 769 +L V+RD AF+ + A LV I+ D+ I D +FD F G+ + EG+ S+A++V Sbjct: 705 PALQSVRRDFAFLAPTSLTAAELVRAIRGADKASIVDARLFDRFTGQGVPEGQVSLAVEV 764 Query: 770 LIQPLKDTFRDDDIR 784 +QP++ +F D +++ Sbjct: 765 ELQPMEKSFTDAELK 779 >gi|225630137|ref|YP_002726928.1| Phenylalanyl-tRNA synthetase beta chain [Wolbachia sp. wRi] gi|225592118|gb|ACN95137.1| Phenylalanyl-tRNA synthetase beta chain [Wolbachia sp. wRi] Length = 779 Score = 527 bits (1357), Expect = e-147, Method: Compositional matrix adjust. Identities = 320/811 (39%), Positives = 467/811 (57%), Gaps = 41/811 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWL ++L+T+ SLE+I D LT IGLEVE V + L+ F + +VL V ++P+ D Sbjct: 1 MKFTLSWLLEYLETNASLEEITDKLTHIGLEVEDVIDNTKLAGFIVAEVLEVIQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++D G + +Q+VCGA NVR G+ V A GS +PE++ + KIRG+ S GM+C Sbjct: 61 LKLCKVDDGS-KILQIVCGANNVREGMKTVLASLGSTLPESDFTIKPTKIRGVLSEGMLC 119 Query: 120 SEKELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S EL L ++S I+EL D VG + + DP+ID+++TPNR DC+G+ GIA DL Sbjct: 120 SASELALVQEESEGIIELSDDYKVGDKFFN----CDPVIDINVTPNRGDCLGIYGIARDL 175 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G LK ++I S + P++++ D S G + V+N +P W++ RL Sbjct: 176 AATGIGTLKTLSIPQLTSFINSPIDVEV-TDGESFISGIY---IANVKNQESPKWLKDRL 231 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +++G+RSISA+VDITNY+ + P H +DA +I LTVR+A GEK L+ +EY L+ Sbjct: 232 ESIGMRSISAIVDITNYIMISFSRPMHAYDAKKIEGELTVRKANDGEKFAGLNGKEYLLN 291 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D VIA D I IAGIIGGK + C TTD+ +E A +DPI+I +S + LGI TD+ Y Sbjct: 292 KDISVIAGDKNIHGIAGIIGGKCSECTLETTDIFLESAWFDPISITKSSRQLGISTDASY 351 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RF R VD L +IL LCGG S + A ++ K+ F +V + + Sbjct: 352 RFARSVDPGFTFDGLNLAAKMILDLCGGETSSVVSAGSLDSVDTKVSFDYQDVNKFGSVS 411 Query: 419 VPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V ++ L IL +LGFS+ + + + V VPSWR DV ADL+EE+ RIYG D+IK EPL Sbjct: 412 VSPDEVLDILTKLGFSIDKKTEGNWNVQVPSWRPDVTIPADLIEEVTRIYGYDKIKEEPL 471 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P N+ S ++ ++ +R EV+ WSF+S+ + FG + I NP Sbjct: 472 P-------NNVEEVDSTYDNLRILMTNRGFHEVLTWSFMSESTAEKFGYSNKLFIIDNPF 524 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 + + + MR S++P LL+ T N+ I+D AIFE+ +Y D K++ +GIR G++ Sbjct: 525 NNNFNIMRPSIMPNLLQVTADNIAHGISDLAIFEIGPIY--DGEARSKHVLSGIRTGNN- 581 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 R VD+FDAKAD ++ +E F V+ D+L E YHPG+SG + Sbjct: 582 -------LPRNHYNTDRKVDVFDAKADCIAALEFFNVNCDNLTIEKAEKEHYHPGKSGTL 634 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSL 713 + V GYFGE HPNILD F + + GFEV L++I P+S+KK K Sbjct: 635 SFKNK-VAGYFGELHPNILDLFDIKQKVVGFEVILENIENLPVSRKKFIDYK-------Y 686 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 VKRD AFIV++ + G ++N+IK LI +V +FDV+ G ++ K S+A+ V Sbjct: 687 QSVKRDFAFIVNKDVEVGNIINVIKKSSELITEVLIFDVYHGNNIEPNKMSIALSVTFCS 746 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + +I+ IV V + T LR+ Sbjct: 747 PIHTLTEKEIQKESSAIVNLVCENTGGTLRT 777 >gi|83944912|ref|ZP_00957278.1| phenylalanyl-tRNA synthetase, beta subunit [Oceanicaulis alexandrii HTCC2633] gi|83851694|gb|EAP89549.1| phenylalanyl-tRNA synthetase, beta subunit [Oceanicaulis alexandrii HTCC2633] Length = 796 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 314/813 (38%), Positives = 481/813 (59%), Gaps = 26/813 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFT SWLK+HLDTD+SL ++ + +T GLE+E++++ A L+ F+ V + +PD D Sbjct: 1 MKFTYSWLKEHLDTDLSLAQLDEAMTMAGLEIEEIEDPGAKLAEFSTAYVKDAQPHPDAD 60 Query: 60 CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIP--ENNMIVNVRKIRGIEST 115 LR+ T + ++ Q+VCGAPN R G+ ++AP G+ IP + ++ RKIRGIES Sbjct: 61 K--LRVCTVETRDGIKQIVCGAPNARAGMTAIYAPLGAYIPGLDFSLDKKPRKIRGIESH 118 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GMMCS KE+ +D I +L D PVG ++ L L+DP+ID +TPNR D +GV GIA Sbjct: 119 GMMCSTKEIEAGEDHDGIADLKGDWPVGTPAAEALGLNDPVIDFEVTPNRPDWLGVYGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 DL AAG G LK + S P+ +K D ++ C FA ++GV+N +P WM+ Sbjct: 179 RDLAAAGAGTLKTGPVKKVPGSFPCPVTVKLDWPEA--CPIFAGRVIRGVKNGPSPEWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA-CSGEKILALDNQE 294 +RL A+G++ + LVD+TNYVS D P HV+D ++I VL R+ ++ +ALD + Sbjct: 237 KRLNAIGIKPKNLLVDVTNYVSFDYARPLHVYDMAKIGPVLYARKGRGEADQHVALDEKT 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y S + VIA D R + GI+GG+++GC +TTDV +E A +DP I +S + LGI + Sbjct: 297 YTPSESHCVIADDERALGLGGIMGGQYSGCSSDTTDVFIESAWFDPAIIRKSARELGIDS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D++YRFERGVD + + ++ +LIL GG ASD+ ++ +P I+F + +KRL Sbjct: 357 DAKYRFERGVDPESPVDGIELATALILEYGGGEASDVTVSGTAPARPDDIIFDPARIKRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+++ + IL LGF V +++ VSVPSWR+D ++ADL+E++ RI G D + Sbjct: 417 LGLELSEDRIEEILVSLGFGVT-RGERWTVSVPSWRRDCAQQADLIEDVARIAGYDNLPV 475 Query: 475 EPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + E + + Q+R R +R A+R E + WSF +Q+ LFGG L + Sbjct: 476 VSFRRPEGERFEAPATELQNRVRAARRSAANRGYREAITWSFCRSDQADLFGGVGEGLVL 535 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPIS+++ MR + L LL + ++ DR D FE +Y ND P+GQ+ + AG+R+ Sbjct: 536 ENPISSELDVMRPTALIHLLTSVQKSADRGFDDARFFEAGPIYLNDAPDGQQTVVAGVRR 595 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGR 652 + + W + D+FD KADA++ +E + +D L+ + A +HPGR Sbjct: 596 VVAARD-----WRGEGAP-----DVFDIKADAMAALEAAGAPVDKLQVTADARDHWHPGR 645 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 SG+++ + VL FGE HP L + + FEV+LD+IP ++KK K + + LS Sbjct: 646 SGVLRLGPK-VLAEFGEIHPRTLKALDVDGRVLAFEVFLDAIPATKKKALKARPPLELSG 704 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 L VKRD AF++D P+ L+ +K ++ LI DV +FDV+QG+ + EG+ S+A++V I Sbjct: 705 LMAVKRDYAFLMDASAPSAELIKAVKGAEKQLITDVALFDVYQGQGVPEGQVSLALEVTI 764 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 QP T D +I + +I+ N +K A LR Sbjct: 765 QPTDKTLTDKEIEAISAKIIAN-AQKAGASLRG 796 >gi|262276754|ref|ZP_06054547.1| phenylalanyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] gi|262223857|gb|EEY74316.1| phenylalanyl-tRNA synthetase, beta subunit [alpha proteobacterium HIMB114] Length = 789 Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust. Identities = 316/810 (39%), Positives = 472/810 (58%), Gaps = 28/810 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK TLSWLK HL+T S ++I LT+IGLEVE+V + + L F I K+L +++P+ D Sbjct: 1 MKLTLSWLKKHLNTKASTDQIVGALTNIGLEVEEVIEENKNLELFKIAKILKADKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +DTGK E +VVCGA N R GLL V+APPG+ IP+N M + + KIRGIES GM+ Sbjct: 61 KLKICDVDTGKKIE-KVVCGAANAREGLLTVYAPPGAVIPKNGMKLVIAKIRGIESKGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL +S++S I E+ + VG + + + ++ IID+S+TPNRSDC+GVRGIA DL Sbjct: 120 CSESELGISNESDGITEIQ-NKKVGEK---FFKNTEEIIDISITPNRSDCLGVRGIARDL 175 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A GLGK+ E E +K ++ +S C GF ++ V N +P W+++ L Sbjct: 176 SAYGLGKIIEE--KKIKLKEKSKERVKVEIKKNSGCNGFGSLFIEDVNNCESPEWLKKDL 233 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 ++ GL+ ISA+VD+TNYV D P H +DA ++ + VR A +GE ALD ++Y + Sbjct: 234 ESFGLKPISAIVDVTNYVMFDLNRPMHAYDADKLDGNIIVREAKNGESFDALDEKKYKIP 293 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +I +I + GIIGG+ + + NT ++++E A +DPI IAR K LGIITD+++ Sbjct: 294 SGACLITDKNKILGLGGIIGGQSSAINLNTKNIVLEAAAFDPIKIARVSKQLGIITDAKF 353 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + LK LI ++CGG S I I+ + K +KI F + ++L G Sbjct: 354 RFERGVDPNSIEAGLKLAAKLIQNICGGKISKINISGDTKNKNKKIKFDINNFEKLIGFS 413 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ++D +ILE LGF + + + + +PSWR DV ++AD++EEILRI G+D+I+S P Sbjct: 414 VKVKDCQKILETLGFKIKAKKNILVIEIPSWRPDVSQEADIIEEILRIKGLDKIQSIPPK 473 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 L E K L+ Q V+R ASR E ++WSF S + + + + ++I NPIS Sbjct: 474 LN--EKKSVLNYHQKLFHLVQRSFASRGFFETISWSFTSSKFNQYY--SDQTIKITNPIS 529 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 +D+ +R+S L+ N+DR+ ++ +FEV V++ D Q+ +A+GI G Sbjct: 530 SDLDVLRSSNFVNLILQAKLNLDRSNSNLQMFEVGPVFKEDLT--QETIASGILVGKK-- 585 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSG--I 655 + W + EE + DAK ++ +SLD+L E ++YHPG+S Sbjct: 586 --TSSTWVNNDEE----FNAIDAKEHLYYILSDLGLSLDNLVVEKSEKNYYHPGQSADVF 639 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 I + FG HP IL + I G EVYLD+ ++ +KK + Sbjct: 640 IGNKKGPKVASFGTIHPLILQKMDIQKTNIIGLEVYLDNFIEPKRPSRVSKKQLKKYDFQ 699 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V+RD AFI+D+ + AG L+++IK D+LI V VFD+++G+ + KKS+AI+VL +P Sbjct: 700 IVERDFAFILDKKVRAGDLLSLIKKTDQLIKSVNVFDLYEGEKIDLDKKSIAIKVLFEPT 759 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D I L D+I+ + K LRS Sbjct: 760 DKTLNDKQIDELSDKII-SAAKSLGGSLRS 788 >gi|73667203|ref|YP_303219.1| phenylalanyl-tRNA synthetase beta subunit [Ehrlichia canis str. Jake] gi|91208241|sp|Q3YRN4|SYFB_EHRCJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|72394344|gb|AAZ68621.1| phenylalanyl-tRNA synthetase beta subunit [Ehrlichia canis str. Jake] Length = 785 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 307/818 (37%), Positives = 462/818 (56%), Gaps = 48/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFT SWL+ +LDTDVSL+ I L+ IG+EV VD E L F I +VL V + + Sbjct: 1 MKFTFSWLRRYLDTDVSLDVIIKKLSDIGIEVNNVDYCEHLKTFVIAEVLEVNPHHSANK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 I ++ GK Q +QVVCGA NV+VG+ V A GS +P + I+ V K+RG+ES GM+C Sbjct: 61 LKICKVSDGK-QILQVVCGASNVKVGMKSVLACVGSIMPTDQSIIEVVKLRGVESYGMLC 119 Query: 120 SEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S EL + D S I+ELP VG D DPII+VS+TPNR DC+GV GIA Sbjct: 120 SNDELGIVDHRNSKNGIIELPNTYNVG----DTFFPCDPIIEVSITPNRGDCLGVYGIAR 175 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 DL AAGLGKLK I S+ S P+E+ +D + KG +KG++N +P W++ Sbjct: 176 DLAAAGLGKLKCIGELSNHSNCSSPIEVSVQVD--GIVKGRY---IKGIKNCESPKWLKD 230 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 L G+ SIS +VDITNY+ L P HV+DA++I + L ++A + + AL++++Y Sbjct: 231 YLLVCGINSISFVVDITNYIMLSFNRPLHVYDANKIKNKLIFKKADNQTEFYALNDKKYI 290 Query: 297 LSPDNVV-IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L +N+V + + I S+AG+IG K + C +T D+ +E A + P++I S K + + TD Sbjct: 291 LGTENIVAVDLENSIHSVAGVIGSKLSSCLLDTEDIFLESAWFAPVDIVLSSKKIKLSTD 350 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S YRFER VD + + L +IL CGGT D+ ++ F V+ + Sbjct: 351 SSYRFERFVDPRFLQTGLDLATKMILEYCGGTHFDVVSNEVHVVDNIELNFFPDSVRSIG 410 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +++ E+ L +LGF ++ ++F V+VPSWR D++ +D+VEE+LR+YG D+I Sbjct: 411 NVNISNEEIFDFLIKLGF-IVDNNNEFLWRVTVPSWRSDIKHSSDIVEEVLRLYGYDKIC 469 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 EP+P++ V+ + +K +L S +MEV+ WSF + + G L I Sbjct: 470 EEPIPISHVD------ISDDYHDRLKALLLSEGLMEVITWSFTNMVFAEKLGYSSELLLI 523 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGIR 592 NPIS ++ MR SLL LL+ N ++ AIFE+ VY N+ + G+R Sbjct: 524 DNPISDKLNLMRPSLLLNLLQVVYENQAYGSSEIAIFEIGQVYGFNNICGSNSNVVCGVR 583 Query: 593 KGSSGIEGSGRLWSDKSEERC-RFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHP 650 G++ ++ +C R VD+FD K+D +S+++ + +S+ S+ HP Sbjct: 584 YGNN---------LPRNLYKCDRSVDVFDVKSDVISILQELNIESNSIELRKSDKSYLHP 634 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP---ISQKKRTKTKKV 707 RS + +I LGYFGE HPNI+ + + P+ FEV+L IP ++ K+ T+ Sbjct: 635 VRSADVYFK-DICLGYFGELHPNIVHLYEIKRPVVCFEVFLYKIPKVDVAHKELTE---- 689 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 S VKRD AF++D+ L+++ KN + LID+VTVFD+++G S+G+ K SVA Sbjct: 690 ---SCYQSVKRDFAFLIDKDTSVQHLIDVTKNSNPVLIDNVTVFDLYEGNSIGDNKLSVA 746 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V P+ T D +I+ D I+ V +K VLRS Sbjct: 747 LSVTFNPVDHTLNDQEIKDASDLIINAVAEKLGGVLRS 784 >gi|88658312|ref|YP_507252.1| phenylalanyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] gi|88599769|gb|ABD45238.1| phenylalanyl-tRNA synthetase, beta subunit [Ehrlichia chaffeensis str. Arkansas] Length = 788 Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust. Identities = 303/816 (37%), Positives = 473/816 (57%), Gaps = 41/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+FTLSWL +LDTDVSL+ I + L+ IG+EV+ VD E L F + +VL V + + Sbjct: 1 MRFTLSWLMQYLDTDVSLDIIVNKLSDIGIEVDNVDYCEHLKTFVVAEVLEVVPHHAANR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++ GK + QVVCGA NVR G+ V A GS IP+N ++ V K+RG+ES GM+C Sbjct: 61 LKVCQVFDGK-ETFQVVCGASNVRAGIKSVLARVGSIIPKNQSVIEVVKLRGVESYGMLC 119 Query: 120 SEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S+ EL + D S S I+EL VG DPII+VS+TPNR DC+GV GIA Sbjct: 120 SKDELGIVDHSNSNDGIIELSSAYNVGNTFFS----CDPIIEVSITPNRGDCLGVYGIAR 175 Query: 177 DLVAAGLGKLKEIN---ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 DL AAG+GKLK I+ ++ +S S P++I + + KG +KG++N +P W Sbjct: 176 DLAAAGMGKLKCIDNNIVNDSTASNSSPVDIC--MQAEGIVKGRY---IKGIKNCESPKW 230 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ L G+ S+S +VDITNY+ L P HV+DAS+I L ++A S + AL+++ Sbjct: 231 LKDNLLVCGINSVSFVVDITNYIMLSFNRPLHVYDASKIKKKLIFKKADSQMEFSALNDK 290 Query: 294 EYDLSPDNVV-IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +Y L +N++ + S+ I S+AGIIG + + C T D+ +E A ++P++I S + + + Sbjct: 291 KYILGTENIIAVDSNDNIHSVAGIIGSQLSSCSLETEDIFLESAWFNPMDIVLSSRKIKL 350 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 TD+ YRFER VD + + L +IL CGG D+ N ++ F+ V+ Sbjct: 351 STDASYRFERFVDPKFLQTGLDLATKMILEYCGGEFFDVVSDENYLINDIRLDFLPESVR 410 Query: 413 RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ +D+ + L +LGF V D ++V+VPSWR D++ +D+VEE+LR+YG D+ Sbjct: 411 KVGNVDIATKQIFDFLVKLGFFVDNSNEDVWKVTVPSWRSDIQHSSDIVEEVLRLYGYDK 470 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I EP+P++ V+ + S R ++ VL S +MEV+ WSF S + G L Sbjct: 471 ICEEPIPISHVD-----VVDNSYDR-LRSVLLSEGLMEVITWSFTSMTFAKKLGYDSELL 524 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP-EGQKYMAAG 590 + NPI+ ++ MR S+L LL+ N ++ AIFE+ +Y D G Y+ G Sbjct: 525 LLDNPINDKLNLMRPSVLLNLLQVVSDNQAYGSSEVAIFEIGQIYNIDNVCSGNSYVVGG 584 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 +R G++ +L D+S VD+FD K+D +S++ E ++ D++ F+ + H Sbjct: 585 VRYGNNFPRNLYKL--DRS------VDIFDVKSDVISILRELNINSDAVEFKKSDKPYLH 636 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P +S + + I+LGYFGE HP+I+ + + P+ FEV+L IP + +K+ V Sbjct: 637 PVKSADVYFN-NILLGYFGELHPDIIHLYEIKRPVVCFEVFLYKIP---QINVISKEFVE 692 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S VKRD AF++D++I LV++ KN + LID+V VFD+++G ++G+ K SVA+ Sbjct: 693 -SCYQLVKRDFAFLIDKNISVQCLVDVTKNSNSTLIDNVVVFDLYEGDNIGDNKLSVALS 751 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +P+ T D +I+ DRI+ V ++ VLRS Sbjct: 752 VTFRPVDHTLNDQEIKDASDRIISAVAQELGGVLRS 787 >gi|68171733|ref|ZP_00545085.1| tRNA-binding region:Ferredoxin-fold anticodon-binding:B3/4:tRNA synthetase, B5 [Ehrlichia chaffeensis str. Sapulpa] gi|67998844|gb|EAM85544.1| tRNA-binding region:Ferredoxin-fold anticodon-binding:B3/4:tRNA synthetase, B5 [Ehrlichia chaffeensis str. Sapulpa] Length = 788 Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust. Identities = 303/816 (37%), Positives = 472/816 (57%), Gaps = 41/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+FTLSWL +LDTDVSL+ I + L+ IG+EV+ VD E L F + +VL V + + Sbjct: 1 MRFTLSWLMQYLDTDVSLDIIVNKLSDIGIEVDNVDYCEYLKTFVVAEVLEVVPHHAANR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++ GK + QVVCGA NVR G+ V A GS IP+N ++ V K+RG+ES GM+C Sbjct: 61 LKVCQVFDGK-ETFQVVCGASNVRAGIKSVLARVGSIIPKNQSVIEVVKLRGVESYGMLC 119 Query: 120 SEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S+ EL + D S S I+EL VG DPII+VS+TPNR DC+GV GIA Sbjct: 120 SKDELGIVDHSNSNDGIIELSSAYNVGNTFFS----CDPIIEVSITPNRGDCLGVYGIAR 175 Query: 177 DLVAAGLGKLKEIN---ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 DL AAG+GKLK I+ ++ +S S P++I + + KG +KG++N +P W Sbjct: 176 DLAAAGMGKLKCIDNNIVNDSTASNSSPVDIC--MQAEGIVKGRY---IKGIKNCESPKW 230 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++ L G+ S+S +VDITNY+ L P HV+DAS+I L ++A S + AL+++ Sbjct: 231 LKDNLLVCGINSVSFVVDITNYIMLSFNRPLHVYDASKIKKKLIFKKADSQMEFSALNDK 290 Query: 294 EYDLSPDNVV-IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +Y L +N++ + S+ I +AGIIG + + C T D+ +E A ++PI+I S + + + Sbjct: 291 KYILGTENIIAVDSNDNIHGVAGIIGSQLSSCSLETEDIFLESAWFNPIDIVLSSRKIKL 350 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 TD+ YRFER VD + + L +IL CGG D+ N ++ F+ V+ Sbjct: 351 STDASYRFERFVDPKFLQTGLDLATKMILEYCGGEFFDVVSDENYLINDIRLDFLPESVR 410 Query: 413 RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ +D+ + L +LGF V D ++V+VPSWR D++ +D+VEE+LR+YG D+ Sbjct: 411 KVGNVDIATKQIFDFLVKLGFFVDNSNEDVWKVTVPSWRSDIQHSSDIVEEVLRLYGYDK 470 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I EP+P++ V+ + S R ++ VL S +MEV+ WSF S + G L Sbjct: 471 ICEEPIPISHVD-----VVDNSYDR-LRSVLLSEGLMEVITWSFTSMTFAKKLGYDSELL 524 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP-EGQKYMAAG 590 + NPI+ ++ MR S+L LL+ N ++ AIFE+ +Y D G Y+ G Sbjct: 525 LLDNPINDKLNLMRPSVLLNLLQVVSDNQAYGSSEVAIFEIGQIYNIDNVCSGNSYVVGG 584 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 +R G++ +L D+S VD+FD K+D +S++ E ++ D++ F+ + H Sbjct: 585 VRYGNNFPRNLYKL--DRS------VDIFDVKSDVISILRELNINSDAVEFKKSDKPYLH 636 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P +S + + I+LGYFGE HP+I+ + + P+ FEV+L IP + +K+ V Sbjct: 637 PVKSADVYFN-NILLGYFGELHPDIIHLYEIKRPVVCFEVFLYKIP---QINVISKEFVE 692 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S VKRD AF++D++I LV++ KN + LID+V VFD+++G ++G+ K SVA+ Sbjct: 693 -SCYQLVKRDFAFLIDKNISVQCLVDVTKNSNSTLIDNVVVFDLYEGDNIGDNKLSVALS 751 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +P+ T D +I+ DRI+ V ++ VLRS Sbjct: 752 VTFRPVDHTLNDQEIKDASDRIISAVAQELGGVLRS 787 >gi|58698343|ref|ZP_00373258.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] gi|58535133|gb|EAL59217.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila ananassae] Length = 745 Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust. Identities = 298/777 (38%), Positives = 441/777 (56%), Gaps = 42/777 (5%) Query: 35 VDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPP 93 +DN + L+ F + +VL V ++P+ D + ++D G + +Q+VCGA NVR G+ V A Sbjct: 2 IDNTK-LAGFIVAEVLEVIQHPNADKLKLCKVDDGS-KILQIVCGANNVREGMKTVLASL 59 Query: 94 GSCIPENNMIVNVRKIRGIESTGMMCSEKELML-SDDSASIMELPIDAPVGGRLSDYLEL 152 GS +PE++ + KIRG+ S GM+CS EL L ++S I+EL D VG + + Sbjct: 60 GSTLPESDFTIKPTKIRGVLSEGMLCSASELALVQEESEGIIELSDDYKVGDKFFN---- 115 Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS 212 DP+ID+++TPNR DC+G+ GIA DL A G+G LK ++I S + P++++ D S Sbjct: 116 CDPVIDINVTPNRGDCLGIFGIARDLAATGIGTLKTLSIPQLTSFINSPIDVEV-TDGES 174 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 G + V+N +P W++ RL+++G+RSISA+VDITNY+ + P H +DA +I Sbjct: 175 FISGIY---IANVKNQESPKWLKDRLESIGMRSISAIVDITNYIMISFSRPMHAYDAKKI 231 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 LTVR+A GEK L+ +EY L+ D VIA D I IAGIIGGK + C TTD+ Sbjct: 232 EGELTVRKANDGEKFAGLNGKEYLLNKDISVIAGDKNIHGIAGIIGGKCSECTLETTDIF 291 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A +DPI+I +S + LGI TD+ YRF R VD L +IL LCGG S + Sbjct: 292 LESAWFDPISITKSSRQLGISTDASYRFARSVDPGFTFDGLNLAAKMILDLCGGETSSVV 351 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQ 451 A ++ K+ F +V + + V ++ L IL +LGFS+ + + + V VPSWR Sbjct: 352 SAGSLDSVDTKVSFDYQDVNKFGSVSVSPDEVLDILTKLGFSIDKKTEGNWNVQVPSWRP 411 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 DV ADL+EE+ RIYG D+IK EPLP N+ S ++ ++ +R EV+ Sbjct: 412 DVTIPADLIEEVTRIYGYDKIKEEPLP-------NNVEEVDSTYDNLRILMTNRGFHEVL 464 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 WSF+S+ + FG + I NP + + + MR S++P LL+ T N+ I+D AIFE Sbjct: 465 TWSFMSESTAEKFGYSNKLFIIDNPFNNNFNIMRPSIMPNLLQVTADNIAHGISDLAIFE 524 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + +Y D K++ +GIR G++ R VD+FDAKAD ++ +E Sbjct: 525 IGPIY--DGEARSKHVLSGIRTGNN--------LPRNHYNTDRKVDVFDAKADCIAALEF 574 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 F V+ D+L E YHPG+SG + + V GYFGE HPNILD F + + GFEV Sbjct: 575 FNVNCDNLTIEKAEKEHYHPGKSGTLSFKNK-VAGYFGELHPNILDLFDIKQKVVGFEVI 633 Query: 691 LDSI---PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDV 747 L++I P+S+KK K VKRD AFIV++ + G ++N+IK LI +V Sbjct: 634 LENIENLPVSRKKFIDYK-------YQSVKRDFAFIVNKDVEVGNIINVIKKSSELITEV 686 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FDV+ G ++ K S+A+ V T + +I+ IV V + T LR+ Sbjct: 687 LIFDVYHGNNIEPNKMSIALSVTFCSPIHTLTEKEIQKESSAIVNLVCENTGGTLRT 743 >gi|148284634|ref|YP_001248724.1| phenylalanyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Boryong] gi|146740073|emb|CAM80206.1| phenylalanyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Boryong] Length = 812 Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust. Identities = 292/831 (35%), Positives = 472/831 (56%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTL WLK L TD +L I LT +GLEVE + +R L F I +++ ++ +P+ Sbjct: 1 MKFTLKWLKQFLVTDANLIDITQALTDLGLEVESIIDRSVKLKDFIIAEIIDIKPHPNAQ 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++++G + +Q+VCGA NVRVGL V A PG+ IP N ++ IRG+ S GM+ Sbjct: 61 KLQICKVNSGT-KILQIVCGASNVRVGLKVVLAVPGTKIPNGNFVIKATSIRGVASDGML 119 Query: 119 CSEKELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSE+EL+L S+D+ SIMEL A VG + +DP+I +++TPNR DC+G+ GIA + Sbjct: 120 CSEEELLLDSNDNNSIMELSPTATVGDSFAATFGYNDPVIQINVTPNRGDCLGIYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L A GLGKL+ ++ + S+ IK + C F + ++ + N + P+W++ Sbjct: 180 LHAKGLGKLQLVDDNFKTSTNGHFKSNIKLKISAKDTCSLFIITEIQDINNACSSPSWLQ 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQE 294 L+ VGL+SIS +VDITNYV GYP H + ++S+ + VR+A + E I+AL++Q Sbjct: 240 HFLRNVGLKSISPVVDITNYVCYSFGYPIHAYAKDKLSNNEIEVRKAYANESIIALNHQS 299 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y L ++V++ ++ ++AGIIG + C T ++++E + +I +G+ L I + Sbjct: 300 YKLDTADLVVSCGNKVIALAGIIGTLDSECKSETKNIILETGYFLADSIMTTGRKLNIES 359 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVKR 413 D+RYRFER VD V ++LI+S+CGG S+ + + T P K + F +E ++ Sbjct: 360 DARYRFERQVDYNMASKVHAIALNLIISICGGKISETVLYDDATTTPAKTLEFPINEFEK 419 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGV 469 +GI + + IL LGF++ D ++ +PSWR D+ K D+VEE+LR+YG Sbjct: 420 KTGIRLTKSTIINILGNLGFTISNIADDTSSILKLEIPSWRSDIAIKEDIVEELLRVYGY 479 Query: 470 DQIKSEPLPLTQVEDKRN------LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 + P+ KRN L +Q +KRV A+ EV+ WSF++ + Sbjct: 480 KFLPEVPI-------KRNNQSFTALPSKQQNILTIKRVAAACGYNEVITWSFMNSKIVKY 532 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 F +L+ILNPIS D+ MR +++P LL+A +N R++ + A FE+ V+ Sbjct: 533 FSTYNEKLKILNPISQDLDYMRPTIIPNLLEAIAKNQARSLKNQAFFEIGPVFSKTETCN 592 Query: 584 QKYMAAGIRKGSSGIEGSGRL---WSDKSEERCRFVDLFDAKAD-ALSVIEPFVSLDSLR 639 ++ M A ++ G+ + L W ++FD KAD + ++E +++++ + Sbjct: 593 EQCMLAAVKCGNKELMHPHSLILQW-----------NIFDIKADLEVILLELGINIENCK 641 Query: 640 -FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL---DFFG--LSNPICGFEVYLDS 693 ++ A +YHPGR G I + +G FGE HP IL DF G +++ + FE+ +D Sbjct: 642 IIDTTAQEYYHPGRFGSIML-GKTCIGCFGEIHPKILSQVDFCGINITSRVIAFELNIDL 700 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDV 752 +PI + + K ++ +S+ ++RD AFI+DQ IPA +V I VD+ LI V VFDV Sbjct: 701 LPIKKAQYCHKKPII-ISNYQHIERDFAFIMDQCIPASEVVASINEVDKHLIKTVEVFDV 759 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+ + + KKS+A++V +Q T + I+ + I+ + KK NAVLR Sbjct: 760 YTGEKIDDNKKSLALRVTMQSNDQTLTEPIIKEISSNIISKIEKKFNAVLR 810 >gi|157803824|ref|YP_001492373.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia canadensis str. McKiel] gi|157785087|gb|ABV73588.1| phenylalanyl-tRNA synthetase beta subunit [Rickettsia canadensis str. McKiel] Length = 837 Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust. Identities = 301/852 (35%), Positives = 453/852 (53%), Gaps = 65/852 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK LDT S+ +I + LT+IGLEVE+V D + L F + +++V+ +P D Sbjct: 1 MKFTLSWLKQFLDTSASVAEIAEVLTAIGLEVEEVIDKAKELQKFEVAHIINVKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K+ +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKNGVLQIVCGASNARAGIKVVLANIGIEIPNGKFKIKESTIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+ELP DA +G + Y L DPI +++TPNR D +GV G+A DL Sbjct: 121 SEEELLLASESEGIIELPEDAVLGENFTKYCGLDDPIFVINVTPNRGDALGVYGVARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A GLG LKE+ I P + +IK ++ D C F +K ++N +P+W+R+ LK Sbjct: 181 AKGLGTLKELEI--PEIKSTFTSKIKLNVQDKEACPLFTFREIKNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE-------------- 285 VG+++IS+LVD+TNY+S G P H +DA +I DV+ V R G+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADKIKDVIIVGRYYEGKQVSSRDLTTGSNEI 298 Query: 286 -----------------------------KILALDNQEYDLSPDNVVIASDGRIQSIAGI 316 K AL+ +EY L+ +++VI + I +AG+ Sbjct: 299 TSAVSCAMDPAVKLRDDDTGQRYDKSDIVKFHALNGKEYLLTENDLVIKDECSIHGLAGV 358 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 IGG + C D+TT++++E A ++ +A SG+ I TD+RYR ER +D L Sbjct: 359 IGGVDSSCTDSTTNIILEAACFNAKIVAASGRRFQIDTDARYRNERNIDRNFTEKALDIA 418 Query: 377 VSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 +LILS+CG G S+I K + F +++++GI + I+D IL +LGF Sbjct: 419 TNLILSICGNGEISEIVKVGEKELKKPPLDFSACYLEKITGIRLNIKDIESILNKLGFIT 478 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 + D +V PSWR D+ D+ EEI RIYG D+I+S LP V+D L + Sbjct: 479 NIKDDVIKVIAPSWRHDITILEDIAEEIARIYGYDKIESIKLP-ELVQDNNKLR-EYKII 536 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 KR+LAS+ EVV SF++ E + LF + EL +LNPIS + + MR ++LP LL Sbjct: 537 SIFKRILASKGYDEVVTNSFMNSEDAKLFAELKEELFLLNPISVEDNYMRPTILPNLLSI 596 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 +N+ R+I D A FEV + + E Y+ A I +G + R Sbjct: 597 VSKNLARSIKDMAFFEVGPSFVDLNTEAS-YLTAII---------TGAYNNKNPHSSGRS 646 Query: 616 VDLFDAKADALSVIE-PFVSLDSLRFESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 D+FD K + V + +S+D +G AP +YHP RS + + LG+FG+ HP Sbjct: 647 YDIFDLKGNLEQVFDYAGLSIDKCIVANGAAAPQYYHPTRSANLALGKNL-LGHFGQIHP 705 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 IL + ++ I FE+ + ++P+ + K K ++ +S RD AFIVDQ G Sbjct: 706 KILKHYDINQEIFAFELNITNLPVIKAKFGKREEFA-VSDFQANFRDYAFIVDQDHSVGE 764 Query: 733 LVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +++ I N + +L+ V +FD++ G L +GKKS+AI+V +Q T D D+ +V Sbjct: 765 IISYINNFNKKLVKSVILFDIYNGDKLPQGKKSIAIKVELQADDRTLSDTDLNSFSKDLV 824 Query: 792 ENVVKKTNAVLR 803 +K LR Sbjct: 825 NATSQKFQGTLR 836 >gi|229586696|ref|YP_002845197.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia africae ESF-5] gi|228021746|gb|ACP53454.1| Phenylalanyl-tRNA synthetase beta chain [Rickettsia africae ESF-5] Length = 818 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 299/834 (35%), Positives = 457/834 (54%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA NVR G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMLQIVCGARNVRAGIKVVLANIGIEIPNGKFKIKESVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS P+ S I ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEIS-PIKSTFIS-KMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKRSDEAISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IG + C D+TT++++E Sbjct: 299 AALQPRNDVAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGEADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + + +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILNKLGFITDVKGELIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDVFDLKGD-LELVADYAG 645 Query: 633 VSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +S+D +G P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIV Q G +++ I N + +LI V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANFRDYAFIVGQDHRVGEIISYINNFNTKLIKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLVAAISQKFQGTLR 817 >gi|15604283|ref|NP_220799.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia prowazekii str. Madrid E] gi|6226174|sp|Q9ZDB4|SYFB_RICPR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3860975|emb|CAA14875.1| PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (pheT) [Rickettsia prowazekii] gi|292572032|gb|ADE29947.1| Phenylalanyl-tRNA synthetase beta chain [Rickettsia prowazekii Rp22] Length = 815 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 297/831 (35%), Positives = 459/831 (55%), Gaps = 45/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+ S+ +I + LT IGLEVE+V D + L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLEISASVTEIAEALTDIGLEVEEVIDKSKELQKFEVAYIRNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K+ +Q+VCGA NVR + V A G IP+ N+ + IRG +S GM+C Sbjct: 61 KLKLCDVETKNGILQIVCGASNVRADIKVVLANIGIEIPKGNLKIKESVIRGQKSYGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+LS +S I+ELP DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLSSNSDGIIELPKDAVVGDNFTKYYGLDDPIFVINVTPNRGDVLGVYGIARDLS 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A GLG LKE+ +S S + +IK ++ D C F ++ ++N +PNW++Q LK Sbjct: 181 AKGLGTLKELELSEIKS--TFFSKIKLNVHDKEACPLFTFREIRNLKNKPSPNWLQQLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE----- 294 VG+++IS+LVD+TNY+S G P H +DA +I ++V +K+++ N E Sbjct: 239 NVGIKTISSLVDVTNYISHSFGQPIHAYDADKIYGGISVDCYIRSDKVISCKNHEMATAV 298 Query: 295 -----------------YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 Y L+ +++ I + IQ +AGIIGG + C+D+TT+V++E A Sbjct: 299 LQFSNDSANFYAINGKGYLLTENDLAIKDESGIQGLAGIIGGAKSSCNDSTTNVILEAAC 358 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARN 396 ++ +A SG+ L I TD+RYR ER +D L +LILS+CG S++ Sbjct: 359 FNAKMVAASGRRLKIDTDARYRNERNIDRNFTEKALNIATNLILSICGNCEVSEVVKVGE 418 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + + + F +++++GI + I++ IL +LGF + D +V PSWR D+ Sbjct: 419 QEPQKKPLDFSVYFLEKITGIKLSIQEIEDILNKLGFITDVKGDIIKVIAPSWRHDINIL 478 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D+ EEI+RIYG D+I+S LP ++ NL + R KR+LAS+ EVV SF+ Sbjct: 479 EDIAEEIVRIYGYDKIESIKLP--ELYQNNNLR-EYKRISSFKRILASKGYDEVVTNSFM 535 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 S E + LF + L +LNP+S + + MR ++LP L+ +N+ R + D A FEV + Sbjct: 536 SSEDAKLFAELKEGLFLLNPMSIEENYMRPTVLPNLISIVSKNLARDVKDMAFFEVGPSF 595 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSL 635 N E Y+ A I SG + R D+FD K D VIE +SL Sbjct: 596 VNLNIEST-YLTAII---------SGAFNNKNPHSFGRNYDIFDIKGDLEQVIEYAGLSL 645 Query: 636 DSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 D E+ P +YHP R+ I+ + LG+FG+ HP IL ++ ++ I FE+ + + Sbjct: 646 DKCIVIDETVLPQYYHPTRAINIRLGKNL-LGHFGQIHPKILKYYDINQEIFAFELNITN 704 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDV 752 +P+ + K K + +S RD +FIVDQ G +++ IKN + +L+ V +FD+ Sbjct: 705 LPLIKAKFGKRDEFT-VSDYQANFRDYSFIVDQDHKVGEIISYIKNFNKKLVKSVMLFDI 763 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G L EGKKS+AI++ +Q T + D+ + +V ++ +K +LR Sbjct: 764 YSGDKLPEGKKSIAIKIKLQADDRTLSETDLNSFSEDLVASISQKFQGILR 814 >gi|157964501|ref|YP_001499325.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia massiliae MTU5] gi|157844277|gb|ABV84778.1| Phenylalanyl-tRNA synthetase beta chain [Rickettsia massiliae MTU5] Length = 818 Score = 470 bits (1210), Expect = e-130, Method: Compositional matrix adjust. Identities = 297/834 (35%), Positives = 457/834 (54%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCNVETKSGMLQIVCGARNARAGIKVVLANIGIEIPNGKFKIKESVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGEKFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS + S I ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEIS-EIKSTFIS-KMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKRSDEPISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IG + C D+TT++++E Sbjct: 299 AALQPRNDVAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGEADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + + +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILNKLGFITDVKGEIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDIFDLKGD-LELVADYAG 645 Query: 633 VSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +S+D +G P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIVDQ G +++ I N + +L+ V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANFRDYAFIVDQDHRVGEIISYINNFNKKLVKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLVATISQKFQGTLR 817 >gi|51473606|ref|YP_067363.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia typhi str. Wilmington] gi|66773898|sp|Q68WW1|SYFB_RICTY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|51459918|gb|AAU03881.1| Phenylalanine translase [Rickettsia typhi str. Wilmington] Length = 815 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 299/830 (36%), Positives = 458/830 (55%), Gaps = 43/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+ S+ +I + LT IGLEVE+V D L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLEISASVTEIAEALTDIGLEVEEVIDKATELQKFEVAYIRNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K+ +Q+VCGA NVR + V A G IP+ N + IRG +S GM+C Sbjct: 61 KLKLCDVETKNGILQIVCGASNVRADIKVVLANIGIEIPKGNFKIKESIIRGEKSYGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+LS DS I+ELP A VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLSSDSNGIIELPEYAVVGDNFTRYYGLDDPIFVINVTPNRGDVLGVYGIARDLS 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A GLG LK++ + P + +IK ++ D + C F ++ ++N +P+W++Q LK Sbjct: 181 AKGLGTLKKLEL--PEIKSTFFSKIKLNVHDKAACPLFTFREIRNLKNKPSPSWLQQLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI------------ 287 VG+++IS+LVDITNY++ G P HV+DA RI L+V R C+ + I Sbjct: 239 NVGIKTISSLVDITNYIAYSFGQPIHVYDADRIYGALSVGRDCNCKVISYKNHEIATAVL 298 Query: 288 ---------LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 A++ +EY L+ +++ I + IQ +AGII G + C+D+T +V++E A + Sbjct: 299 KSSNDTANFYAINGKEYLLTENDLTIKDESGIQGLAGIICGAKSSCNDSTINVILEAACF 358 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNI 397 + +A SG+ L I T+SRYR ER +D L +LILS+CG S++ Sbjct: 359 NARLVAASGRRLKIDTESRYRNERNIDRNFTEKALDIATNLILSICGNCEVSEVVKVGEQ 418 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 + + F +++++GI + I++ IL +LGF + D +V PSWR D+ Sbjct: 419 ELQKIPLDFSVYFLEKITGIKLSIKEIEVILNKLGFITDVKGDIIKVIAPSWRHDINILE 478 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 D+ EEI+RIYG D+I+S LP +D NL + R KR+LAS+ EVV SF+S Sbjct: 479 DIAEEIVRIYGYDKIESIKLPELH-QDNNNLR-EYKRISSFKRILASQGYDEVVTNSFMS 536 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E + LF + EL +LNP+S D + MR ++LP L+ +N+ RAI D A FEV + Sbjct: 537 SEDAKLFAELKEELFLLNPMSIDENYMRPTVLPNLISIVSKNLARAIKDMAFFEVGPSFI 596 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLD 636 N E Y+ A I SG + R D+FD K VIE +SLD Sbjct: 597 NLNTE-LTYLTAII---------SGSFNNKNPHSLGRSYDIFDIKGALEQVIEYAGLSLD 646 Query: 637 S--LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + E+ P +YHP R+ I+ + LG+FG+ HP IL ++ ++ I FE+ + ++ Sbjct: 647 KCIVANETVLPQYYHPTRAINIRLGKNL-LGHFGQIHPKILKYYDINQEIFAFELNITNL 705 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVF 753 P+ + K K + + +S RD +FIV+Q G +++ I N ++ L+ V +FD++ Sbjct: 706 PLIKAKFGKRNE-LKVSDFQANFRDYSFIVNQDHRVGEIISYINNFNKNLVKSVMLFDIY 764 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G L EGKKS++I++ +Q T + D+ +VE++ +K LR Sbjct: 765 SGDKLPEGKKSISIKIELQADDRTLSETDLNAFSQDLVESISQKFQGTLR 814 >gi|15892505|ref|NP_360219.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia conorii str. Malish 7] gi|20140115|sp|Q92I38|SYFB_RICCN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15619664|gb|AAL03120.1| phenylalanyl-tRNA synthetase beta chain [Rickettsia conorii str. Malish 7] Length = 818 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 296/834 (35%), Positives = 454/834 (54%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMLQIVCGARNARAGIKVVLANIGIEIPNGKFKIKESVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS S + ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEISVIKS--TFISKMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKHSDEAISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IG + C D+TT++++E Sbjct: 299 AALQPRNDVAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGEADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + + +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILNKLGFITDVKGEIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSFGRGYDVFDLKGD-LELVADYAG 645 Query: 633 VSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +S+D +G P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIV Q G +++ I N + +LI V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANFRDYAFIVGQDHRVGEIISYINNFNKKLIKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLVAAISQKFQGTLR 817 >gi|157828454|ref|YP_001494696.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933169|ref|YP_001649958.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. Iowa] gi|157800935|gb|ABV76188.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908256|gb|ABY72552.1| phenylalanyl-tRNA synthetase beta chain [Rickettsia rickettsii str. Iowa] Length = 818 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 295/834 (35%), Positives = 450/834 (53%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMLQIVCGARNARAGIKVVLANIGIEIPNGKFKIKESVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS S + ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEISAIKS--TFISKMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKRSDEAISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IGG + C D+TT++++E Sbjct: 299 AALQPRNDLAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGGADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNCEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + D +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILHKLGFITDVKGDIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGENYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDVFDLKGD-LELVADYAG 645 Query: 635 LDSLRF----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 L + + P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNWTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIV Q G ++ I N + +LI V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANVRDYAFIVGQDHRVGEIIAYINNFNKKLIKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLVAAISQKFQGTLR 817 >gi|238650893|ref|YP_002916749.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] gi|238624991|gb|ACR47697.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia peacockii str. Rustic] Length = 818 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 296/834 (35%), Positives = 453/834 (54%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMLQIVCGARNARAGIKVVLANIGIEIPNGKFKIKKSVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS S + ++K ++ D C F ++ ++ +P+W+R+ LK Sbjct: 181 AKGIGILKELEISAIKS--TFISKMKLNVQDKEACPLFTFREIRNLKTKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKRSDEAISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IG + C D+TT++++E Sbjct: 299 AALQPRNDVAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGEADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + + +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILNKLGFITDVKGEIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDVFDLKGD-LELVADYAG 645 Query: 633 VSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +S+D +G P +YHP R+ I VLG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNGTALPQYYHPTRAVNIGLGKN-VLGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIV Q G +++ I N + +LI V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANFRDYAFIVGQDHRVGEIISYINNFNKKLIKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLVAAISQKFQGTLR 817 >gi|34580502|ref|ZP_00141982.1| phenylalanyl-tRNA synthetase beta chain [Rickettsia sibirica 246] gi|28261887|gb|EAA25391.1| phenylalanyl-tRNA synthetase beta chain [Rickettsia sibirica 246] Length = 818 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 295/834 (35%), Positives = 453/834 (54%), Gaps = 48/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + +++ +P D Sbjct: 1 MKFTLSWLKQFLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYITNIKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETTSGMLQIVCGARNARAGIKVVLANIGIEIPNGKFKIKESVIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS S + ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEISAIKS--TFISKMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI +TV R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGITVARHCEKHSDEAISGQQNEIAT 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++VI + IQ +AG+IG + C D+TT++++E Sbjct: 299 AALQPRNDVAKCHALNGKEYLLTENDLVIKDESGIQGLAGVIGEADSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKV 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I+ IL +LGF + + +V PSWR D+ Sbjct: 419 GEKESQKKPLDFSACYLEKITGIKLNIKAIEAILNKLGFITDVKGEIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + + E Y+ A I SG + R D+FD K D L ++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDVFDLKGD-LELVADYAG 645 Query: 633 VSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +S+D +G P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ Sbjct: 646 LSIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELN 704 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + ++P+ + K K + +S RD AFIV Q G +++ I N + +LI V + Sbjct: 705 ITNLPLIKAKFGKRDEFA-VSDFQANFRDYAFIVGQDHRVGEIISYINNFNKKLIKSVIL 763 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD++ G L EGKKS+A+++ +Q T D D+ +V + +K LR Sbjct: 764 FDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLSSFSKDLVAAISQKFQGTLR 817 >gi|239947308|ref|ZP_04699061.1| phenylalanyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] gi|239921584|gb|EER21608.1| phenylalanyl-tRNA synthetase, beta subunit [Rickettsia endosymbiont of Ixodes scapularis] Length = 834 Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust. Identities = 300/851 (35%), Positives = 456/851 (53%), Gaps = 66/851 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V D L F + + S + +P D Sbjct: 1 MKFTLSWLKQFLETSASVIEIAEALTAIGLEVEEVIDKAGELQKFEVAYIASTKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMLQIVCGASNARAGIKVVLANIGIEIPNGKFKIKESVIRGKKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+ELP DA VG + Y L DP+ +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELPEDAAVGENFTKYYGLDDPVFIINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ IS + S I ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEIS-EIKSTFIS-KMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS---GEKIL-------- 288 VG+++IS+LVDITNY+S G P H +DA RI +TV R C+ EK L Sbjct: 239 NVGVKTISSLVDITNYISYSFGQPMHAYDADRIKGEITVARHCNRHCEEKQLSSRGLTVG 298 Query: 289 -----------------------------ALDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 AL+ +EY L+ +++VI + IQ +AG+IGG Sbjct: 299 SNEITSTVSCSMDTVVKPRYDKDDAVTFHALNGKEYLLTKNDLVIKDESGIQGLAGVIGG 358 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 + C D+T ++++E A ++ +A SG+ I TD+RYR ER +D L +L Sbjct: 359 ADSSCTDSTNNIILEAACFNAKMVATSGRRFQIDTDARYRNERNIDRNFTEKALDIATNL 418 Query: 380 ILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF--SVI 436 ILS+CG G S++ + + + F +++++GI + +++ +L +LGF +V Sbjct: 419 ILSICGNGEVSEVVKVGEKESQKKSLDFSACYLEKITGIKLNLKEIEAMLNKLGFITNVK 478 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 GE K V PSWR D+ D+ EEI RIYG D+I+S LP +++ N + R Sbjct: 479 GEIIK--VIAPSWRHDITILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKRIS 534 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 KR+LAS+ EVV SF+S E + LF + EL +LN IS + MR ++LP LL Sbjct: 535 SFKRILASKGYDEVVTNSFMSSEDAKLFAELKEELFLLNSISIGDNYMRPTILPNLLSIV 594 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 +N+ R+I D A FEV + + E Y+ A I SG + R Sbjct: 595 SKNLARSIKDMAFFEVGPSFVDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGY 644 Query: 617 DLFDAKADALSVIE-PFVSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 D+FD K D V++ +S+D +GA P +YHP R+ I + LG+FG+ HP Sbjct: 645 DVFDLKGDLELVVDYAGLSIDKCIATNGAALPQYYHPTRAVNIGLGKNL-LGHFGQIHPK 703 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL 733 IL ++ ++ I FE+ + ++P+ + K K + +S RD AFIVDQ G + Sbjct: 704 ILKYYDINQEIFAFELNITNLPLIKAKFGKRDEFA-VSDFQSNFRDYAFIVDQDHRVGEI 762 Query: 734 VNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 ++ I N + +L+ V +FD++ G L EGKKS+A+++ +Q T D D+ ++ Sbjct: 763 ISYINNFNKKLVKSVILFDIYSGDKLPEGKKSIAVKIELQADDRTLSDTDLNSFSKDLIA 822 Query: 793 NVVKKTNAVLR 803 + +K LR Sbjct: 823 AISQKFQGTLR 833 >gi|67459040|ref|YP_246664.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia felis URRWXCal2] gi|75536524|sp|Q4ULS4|SYFB_RICFE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|67004573|gb|AAY61499.1| Phenylalanyl-tRNA synthetase beta chain [Rickettsia felis URRWXCal2] Length = 818 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 292/833 (35%), Positives = 452/833 (54%), Gaps = 46/833 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T ++ +I + LT+IGLEVE+V ++ A L F + + S + +P D Sbjct: 1 MKFTLSWLKQFLETSSTVIEIAEALTAIGLEVEEVIDKAAELQKFEVAYIASTKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVETKSGMRQIVCGASNARAGIKVVLANIGIEIPNGKFKIKESIIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELYEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G+G LKE+ I P + ++K ++ D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGIGILKELEI--PEIKSTFTSKMKLNVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC--------SGE------ 285 VG+++IS+LVD+TNY+S G P H +DA RI ++V R C SG+ Sbjct: 239 NVGVKTISSLVDVTNYISYSFGQPMHAYDADRIKGGISVARHCEKCSDEAISGQQKEIAA 298 Query: 286 ----------KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 K AL+ +EY L+ +++ I + IQ +AG+IGG + C D+TT++++E Sbjct: 299 AALQPRNDVAKFHALNGKEYLLTENDLAIKDESGIQGLAGVIGGAKSSCTDSTTNIILEA 358 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIA 394 A ++ +A SG+ I TD+RYR ER +D L +LILS+CG G S++ Sbjct: 359 ACFNAKMVAASGRRFQIDTDARYRNERNIDRNFTEKALDIATNLILSICGNGEVSEVVKF 418 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + + + F +++++GI + I++ IL LGF + + +V PSWR D+ Sbjct: 419 GEKEPQKKPLDFSAYYLEKITGIKLSIKEIEAILNELGFITDVKGEIIKVIAPSWRHDIT 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 D+ EEI RIYG D+I+S LP +++ N + R KR+LAS+ EVV S Sbjct: 479 ILEDIAEEITRIYGYDKIESIKLP--ELDQDNNKLREYKRISSFKRILASKGYDEVVTNS 536 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+S E + LF + EL +LNPIS + MR ++LP LL +N+ R+I D A FEV Sbjct: 537 FMSSEDAKLFAELKEELFLLNPISIGDNYMRPTILPNLLSIVSKNLARSIKDMAFFEVGP 596 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFV 633 + + E Y+ A I SG + R D+FD K D V++ + Sbjct: 597 SFIDLNTEAT-YLTAII---------SGSYNNKNPHSLGRGYDIFDLKGDLELVVDYAGL 646 Query: 634 SLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 S+D +G P +YHP R+ I + LG+FG+ HP IL ++ ++ I FE+ + Sbjct: 647 SIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIHPKILKYYDINQEIFAFELNI 705 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 ++P+ + K K ++ +S RD AFIVDQ G +++ I N + +L+ V +F Sbjct: 706 TNLPLIKAKFGKREEFA-VSDFQANFRDYAFIVDQDHRVGEIISYINNFNKKLVKSVILF 764 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++ G L E KKS+AI++ +Q T + D+ + ++ + +K LR Sbjct: 765 DIYSGDKLPESKKSIAIKIELQADDRTLTEADLNLFSQDLIAAIEQKFQGTLR 817 >gi|58617331|ref|YP_196530.1| phenylalanyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] gi|75356681|sp|Q5FFS3|SYFB_EHRRG RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|58416943|emb|CAI28056.1| Phenylalanyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Gardel] Length = 789 Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust. Identities = 291/821 (35%), Positives = 464/821 (56%), Gaps = 50/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+FTLSWL +LDTD SL+ I L+ IGLEV+ VD ++ L F +V+V+ V + D Sbjct: 1 MRFTLSWLMQYLDTDASLDFIISKLSDIGLEVDSVDCKKHLQSFVVVEVIDVVPHHAADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++ G Q QVVCGA NV+VG+ V A GS IP+N ++ V K+RG++S GM+C Sbjct: 61 LKVCQVYDGV-QTFQVVCGASNVKVGMKSVLAYVGSVIPKNQTVIKVAKLRGVDSYGMLC 119 Query: 120 SEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S EL ++++ ++ I+EL + + + DP+I++++TPNR DC+GV GIA Sbjct: 120 SRDELGITENDSTDEGIIELSDNTY---NVGESFFSCDPVIELNITPNRGDCLGVYGIAR 176 Query: 177 DLVAAGLGKLKEINI-------SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 DL AAG+GKLK +N +C +S I LE++ + KG +KG+RN Sbjct: 177 DLAAAGVGKLKSVNFCDITFDNTCYISPIEICLEVQ------GVVKGVY---IKGIRNCE 227 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P W+++ L + G++SIS +VDI NY+ L P H++DA +I+ L R+ + A Sbjct: 228 TPKWLKEYLFSCGVKSISCVVDIINYIMLSFNRPLHIYDADKIAGKLVFRKIDDQIEFFA 287 Query: 290 LDNQEYDLSPDNVVIASD--GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L++++Y L +N+ IA D RI SI G+IG +++ C +T ++ +E A +DP++IA S Sbjct: 288 LNDKKYLLGKENI-IAVDLANRIHSIVGVIGSEYSKCLFDTENIFLECAWFDPVDIALSS 346 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + + TDS YR ER VD + + LK +IL CGG+ S I +N + + F Sbjct: 347 RKIKLSTDSSYRLERFVDPEFLQDGLKLATKMILEYCGGSPSSIVSVQNYVHNDILLNFS 406 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V+ + + + ++ L +G V + D + V PSWR D++ DLVEE+LR+ Sbjct: 407 PDSVRNIGSVSITRDEIFDFLCNIGCVVKNHDCDIWIVIPPSWRSDLKHSFDLVEEVLRL 466 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D+I P+P++ +E NL + ++ VL S+ MMEVV WSF + E + FG Sbjct: 467 YGYDKILENPIPISNIEFPDNLHNK------LRSVLLSQGMMEVVTWSFTNLEFAKKFGY 520 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-QK 585 + I NPI+ +M+ MR S+L LL+ N D AIFE+ +Y ++ G Sbjct: 521 DSDIMLIDNPINNNMNLMRPSVLLNLLQVISENQAYGNNDAAIFEIGQIYNINSVCGDNN 580 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 Y+ +G+R G + + +D+S VD+FD K+D V++ + DS+ Sbjct: 581 YVVSGVRYGDNLPRNFYK--TDRS------VDIFDVKSDFFKVLQEMNIGYDSVDLVRST 632 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S+ HP +S + + I++GYFGE HP+I+ + + PI FEV+L IP+ R Sbjct: 633 KSYLHPMKSADVYFN-NILIGYFGELHPSIVHLYEIKRPIVCFEVFLYKIPVVDLTR--- 688 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 K+ V L VKRD AF+V +++ L+ + K + +LI+DV++FD+++G + +G Sbjct: 689 KEFVEL-RYQSVKRDFAFLVSKNVNIQCLIEVAKKTNVQLIEDVSIFDIYEGNGIDKGML 747 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 SVA+ V + + T D +I+ D I+ + K N +LRS Sbjct: 748 SVALSVTFRSVDHTLNDQEIKDASDLIISAISKGFNGILRS 788 >gi|189183504|ref|YP_001937289.1| phenylalanyl-tRNA synthetase subunit beta [Orientia tsutsugamushi str. Ikeda] gi|189180275|dbj|BAG40055.1| phenylalanyl-tRNA synthetase beta chain [Orientia tsutsugamushi str. Ikeda] Length = 813 Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust. Identities = 291/832 (34%), Positives = 465/832 (55%), Gaps = 50/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFT WLK L TD +L I LT +GLEVE + +R L F I +++ ++ +P+ Sbjct: 1 MKFTPKWLKQFLVTDANLIDITQALTDLGLEVESIIDRSVELKDFIIAEIIDIKPHPNAQ 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++++G + +Q+VCGA NVRVGL V A PG+ IP N ++ IRGI S GM+ Sbjct: 61 KLKICKVNSGT-EILQIVCGASNVRVGLKVVLAVPGTKIPNGNFVIKATSIRGITSDGML 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL+L+ + IMELP A VG + DP+I +++TPNR DC+G+ GIA Sbjct: 120 CSEEELLLNSNDNNNGIMELPPTATVGDSFTAAFGYDDPVIQINVTPNRGDCLGIYGIAR 179 Query: 177 DLVAAGLGKLKEINISC-PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 +L A GLGKL+ ++ + ++ IK + C F ++ + N + P+W+ Sbjct: 180 ELHAKGLGKLQLVDDNFKTYTNGHFKSNIKLKISAKDACSLFITTEIQDINNACSTPSWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQ 293 + L+ VGL+SIS +VDITNY+ GYP H + ++S+ + VR+A + E I+AL++Q Sbjct: 240 QHFLRNVGLKSISPVVDITNYICYSFGYPIHAYAKDKLSNNEIEVRKAYANESIIALNHQ 299 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L ++V++ ++ ++AGIIG + C T ++++E + +I +G+ L I Sbjct: 300 SYKLDTADLVVSCGNKVIALAGIIGTLDSECKSETKNIILETGYFLADSIMTTGRKLNIE 359 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVK 412 +D+RYRFER VD V ++LI S+CGG S+ + + T P K + F +E + Sbjct: 360 SDARYRFERQVDYNMASKVHAIALNLITSICGGKISETVLYDDATTTPAKTLEFPINEFE 419 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYG 468 + +GI + + IL LGF++ D ++ +PSWR D+ K D+VEE+LR+YG Sbjct: 420 KKTGIRLTKSTIINILGNLGFTISNIADDTSSILKLEIPSWRSDIAIKEDIVEELLRVYG 479 Query: 469 VDQIKSEPLPLTQVEDKRN------LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + P+ KRN L +Q +KRV A+ EV+ WSF++ + Sbjct: 480 YKFLPEVPI-------KRNNQSFTALPSKQQNILTIKRVAAACGYNEVITWSFMNSKIVK 532 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F EL+ILNPIS ++ MR +++P LL+A +N R++ + A FE+ V+ Sbjct: 533 YFSTYNEELKILNPISQELDYMRPTIIPNLLEAIAKNQARSLKNQAFFEIGPVFSKTETC 592 Query: 583 GQKYMAAGIRKGSSGI---EGSGRLWSDKSEERCRFVDLFDAKAD-ALSVIEPFVSLDSL 638 ++ M A ++ G+ + S W D+FD KAD + ++E +++ + Sbjct: 593 NEQCMLAAVKCGNKELMHPHSSISQW-----------DIFDIKADLEVILLELGINIANC 641 Query: 639 R-FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL---DFFG--LSNPICGFEVYLD 692 + + A +YHPGR G I + +G FGE HP IL +F G ++N + E+ +D Sbjct: 642 KIIGTPAQEYYHPGRFGSIML-GKTCIGCFGEIHPEILSQVNFCGINITNRVIALELNID 700 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFD 751 S+PI +K + KK + +S+ ++RD AF++D+ IPA +V IK V++ LI V VFD Sbjct: 701 SLPI-KKSQYGYKKPIMISNYQHIERDFAFVMDKCIPASEIVTSIKEVNKHLIKTVEVFD 759 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ G + KKS+A++V IQ T + I+ L + I+ + KK NAVLR Sbjct: 760 VYTGDKIDNNKKSLALRVTIQSNDQTLTEPIIKELSNNIISKIEKKFNAVLR 811 >gi|57239311|ref|YP_180447.1| phenylalanyl-tRNA synthetase subunit beta [Ehrlichia ruminantium str. Welgevonden] gi|58579277|ref|YP_197489.1| phenylalanyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|81352864|sp|Q5HAU7|SYFB_EHRRW RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|57161390|emb|CAH58314.1| phenylalanyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] gi|58417903|emb|CAI27107.1| Phenylalanyl-tRNA synthetase beta chain [Ehrlichia ruminantium str. Welgevonden] Length = 789 Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust. Identities = 290/821 (35%), Positives = 463/821 (56%), Gaps = 50/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+FTLSWL +LDTD SL+ I L+ IGLEV+ VD ++ L F +V+V+ V + D Sbjct: 1 MRFTLSWLMQYLDTDASLDFIISKLSDIGLEVDSVDCKKHLQSFVVVEVIDVVPHHAADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++ G Q QVVCGA NV+VG+ V A GS IP+N ++ V K+RG++S GM+C Sbjct: 61 LKVCQVYDGV-QTFQVVCGASNVKVGMKSVLAYVGSVIPKNQTVIKVAKLRGVDSYGMLC 119 Query: 120 SEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S EL ++++ ++ I+EL + + + DP+I++++TPNR DC+GV GIA Sbjct: 120 SRDELGIAENDSTDEGIIELSDNTY---NVGESFFSCDPVIELNITPNRGDCLGVYGIAR 176 Query: 177 DLVAAGLGKLKEINI-------SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 DL AAG+GKLK +N +C +S I LE++ + KG +KG+RN Sbjct: 177 DLAAAGVGKLKSVNFCDITFDNTCYISPIEICLEVQ------GIVKGVY---IKGIRNCE 227 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P W+++ L + G++SIS +VDI NY+ L P H++DA +I+ L R+ + A Sbjct: 228 TPKWLKEYLFSCGVKSISCVVDIINYIMLSFNRPLHIYDADKIAGKLVFRKIDDQIEFFA 287 Query: 290 LDNQEYDLSPDNVVIASD--GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L++++Y L +N+ IA D RI SI G+IG +++ C +T ++ +E A +DP++IA S Sbjct: 288 LNDKKYLLGKENI-IAVDLANRIHSIVGVIGSEYSKCLFDTENIFLECAWFDPVDIALSS 346 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + + TDS YR ER VD + + LK +IL CGG+ S I +N + + F Sbjct: 347 RKIKLSTDSSYRLERFVDPEFLQDGLKLATKMILEYCGGSPSSIVSVQNYVHNDILLNFS 406 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V+ + + + ++ L +G V + D + V PSWR D++ DLVEE+LR+ Sbjct: 407 PDSVRNIGSVSITRDEIFDFLCNIGCVVKNHDCDIWIVIPPSWRSDLKHSFDLVEEVLRL 466 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D+I P+P++ +E NL + ++ VL S+ M EVV WSF + E + FG Sbjct: 467 YGYDKILENPIPISNIEFPDNLHNK------LRSVLLSQGMTEVVTWSFTNLEFAKKFGY 520 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-QK 585 + I NPI+ +M+ MR S+L LL+ N D AIFE+ +Y ++ G Sbjct: 521 DSDIMLIDNPINNNMNLMRPSVLLNLLQVISENQAYGNNDAAIFEIGQIYNINSVCGDNN 580 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 Y+ +G+R G + + +D+S VD+FD K+D V++ + DS+ Sbjct: 581 YVVSGVRYGDNLPRNFYK--TDRS------VDIFDVKSDFFKVLQEMNIGYDSVDLVRST 632 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S+ HP +S + + I++GYFGE HP+I+ + + PI FEV+L IP+ R Sbjct: 633 KSYLHPMKSADVYFN-NILIGYFGELHPSIVHLYEIKRPIVCFEVFLYKIPVVDLTR--- 688 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 K+ V L VKRD AF+V +++ L+ + K + +LI+DV++FD+++G + +G Sbjct: 689 KEFVEL-RYQSVKRDFAFLVSKNVNIQCLIEVAKKTNVQLIEDVSIFDIYEGNGIDKGML 747 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 SVA+ V + + T D +I+ D I+ + K N +LRS Sbjct: 748 SVALSVTFRSVDHTLNDQEIKDASDLIISAISKGFNGILRS 788 >gi|91205470|ref|YP_537825.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia bellii RML369-C] gi|123266211|sp|Q1RIS8|SYFB_RICBR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|91069014|gb|ABE04736.1| Phenylalanyl-tRNA synthetase beta chain [Rickettsia bellii RML369-C] Length = 870 Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust. Identities = 295/886 (33%), Positives = 463/886 (52%), Gaps = 100/886 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK LDT S+ +I ++LT+IGLEVE++ ++ A L F + ++S + +P D Sbjct: 1 MKFTLSWLKQFLDTSASVTEIAESLTAIGLEVEEIIDKAADLQKFEVAYIVSTKPHPSAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++T K+ +Q+VCGA N R G+ V A G IP + IRG +S GM+ Sbjct: 61 KLKICEVET-KNGNLQIVCGASNARAGIKVVLANIGVEIPNGKFKIKESNIRGEKSCGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L+ +S I+ELP DA VG + Y L DP+ +++TPNR D + V GIA DL Sbjct: 120 CSEEELFLASESEGIIELPEDAVVGEPFTKYYGLDDPVFVINVTPNRGDALSVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G LKE+ I P + ++K ++ D C F ++ ++N +P+W+++ L Sbjct: 180 SAKGIGTLKELEI--PAVKSTFSSKVKLNIKDKEACPLFTFREIRNLKNKPSPDWLQKLL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC------------SGEK 286 K +G++ IS++VD+TNY+S G P H +DA +I + V R C SGE+ Sbjct: 238 KNIGVKPISSIVDVTNYMSYSFGQPMHAYDADKIGGGIVVDRHCEENVIPRLDCGISGEE 297 Query: 287 ----------------ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 AL++++Y L+ ++VI + +Q++AGIIGG + CD NT + Sbjct: 298 SVIQDPVVKPRDDNRGFHALNDKKYLLNKSDLVIKDENGVQALAGIIGGISSSCDSNTMN 357 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTAS 389 +L+E A ++ +A SG+ L I TDSRYRFER +D L LILS+C GG S Sbjct: 358 ILLEAACFNAKMVAASGRRLQIDTDSRYRFERNIDRNFTEKALNIATDLILSICDGGEVS 417 Query: 390 DICIARNITYKPRKIVFMNSEVKRLSGI-------------------------------- 417 +I I+ + + F +++++GI Sbjct: 418 EILISGEKEPAKKTLDFPAGYLEKITGIKLTILLHNEANKGEFVGNTEHSIAAYKEVRED 477 Query: 418 -------DVPIEDSL----------RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 +P+E S IL +LGF+ E D +++ PSWR D+ D+V Sbjct: 478 ASTGLTPKLPLEASYVKGLNIKGIEAILNKLGFATDTEKDVIKITPPSWRHDINILEDVV 537 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EEI RIYG D+I+S LP ++E N + R KR+LAS+ EVV SF++ + Sbjct: 538 EEITRIYGYDKIESIKLP--ELEQDNNRLREHKRISSFKRILASKGYDEVVTNSFMNSKD 595 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + LF + EL +LNPIS + + MR +++P LL +N+ R+I D A FEV + Sbjct: 596 AKLFTELKDELFLLNPISVEDNYMRPTIVPNLLDIVRKNLARSIKDMAFFEVGPNFIGLN 655 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLR 639 E Y+ A + +G S R D+FD K+D +V + +S++ Sbjct: 656 TEAT-YLTAIL---------TGSYNSKNPHSIGRSYDIFDLKSDLETVFDYAGLSIEKCI 705 Query: 640 FESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + A P +YHP RS + + LG+FG+ HP IL + + + FE+ + ++P + Sbjct: 706 VSNQATPLYYHPTRSVNLALGKNL-LGHFGQIHPKILKHYDIKEEVFAFELNITNLPAPK 764 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 K K + + +S RD AFI+ + P G +++ I N + +L+ V +FD++ G Sbjct: 765 AKFGKRDEFI-ISDYQANFRDYAFIIARDQPVGEIISYINNFNKKLVKSVILFDIYSGDK 823 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS+AI+V +Q T +DD+ ++ N+ +K LR Sbjct: 824 LPSGKKSIAIRVGLQADDRTLNEDDLNSFSKDLIANIEQKFQGTLR 869 >gi|157827171|ref|YP_001496235.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] gi|157802475|gb|ABV79198.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia bellii OSU 85-389] Length = 870 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 295/886 (33%), Positives = 464/886 (52%), Gaps = 100/886 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK LDT S+ +I ++LT+IGLEVE++ ++ A L F + ++S + +P D Sbjct: 1 MKFTLSWLKQFLDTSASVTEIAESLTAIGLEVEEIIDKAADLQKFEVAYIVSTKPHPSAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++T K+ +Q+VCGA N R G+ V A G IP + IRG +S GM+ Sbjct: 61 KLKICEVET-KNGNLQIVCGASNARAGIKVVLANIGVEIPNGKFKIKESNIRGEKSCGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L+ +S I+ELP DA VG + Y L DP+ +++TPNR D + V GIA DL Sbjct: 120 CSEEELFLASESEGIIELPEDAVVGEPFTKYYGLDDPVFVINVTPNRGDALSVYGIARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G LKE+ I P + ++K ++ D C F ++ ++N +P+W+++ L Sbjct: 180 SAKGIGMLKELEI--PAVKSTFSSKVKLNIKDKEACPLFTFREIRNLKNKPSPDWLQKLL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC------------SGEK 286 K +G++ IS++VD+TNY+S G P H +DA +I + V R C SGE+ Sbjct: 238 KNIGVKPISSIVDVTNYMSYSFGQPMHAYDADKIGGGIVVDRHCEENVILRLDCGISGEE 297 Query: 287 IL----------------ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 + AL++++Y L+ ++VI + +Q++AGIIGG + CD NT + Sbjct: 298 SVIQDPVDKPRDDNRGFHALNDKKYLLNKSDLVIKDENGVQALAGIIGGISSSCDSNTMN 357 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTAS 389 +L+E A ++ +A SG+ L I TDSRYRFER +D L LILS+C GG S Sbjct: 358 ILLEAACFNAKMVAASGRRLQIDTDSRYRFERNIDRNFTEKALNIATDLILSICDGGEVS 417 Query: 390 DICIARNITYKPRKIVFMNSEVKRLSGI-------------------------------- 417 +I I+ + + F +++++GI Sbjct: 418 EILISGEKEPAKKTLDFPAGYLEKITGIKLTILLHNEANKGEFVGNTEHSIAAYKEVRED 477 Query: 418 -------DVPIEDSL----------RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 +P+E S IL +LGF+ E D +++ PSWR D+ D+V Sbjct: 478 ASTGLTPKLPLEASYVKGLNIKGIEAILNKLGFATDTEKDVIKITPPSWRHDINILEDVV 537 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EEI RIYG D+I+S LP ++E N + R KR+LAS+ EVV SF++ + Sbjct: 538 EEITRIYGYDKIESIKLP--ELEQDNNRLREHKRISSFKRILASKGYDEVVTNSFMNSKD 595 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + LF + EL +LNPIS + + MR +++P LL +N+ R+I D A FEV + Sbjct: 596 AKLFTELKDELFLLNPISVEDNYMRPTIVPNLLDIVRKNLARSIKDMAFFEVGPNFIGLN 655 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLR 639 E Y+ A + +G S R D+FD K+D +V + +S++ Sbjct: 656 TEAT-YLTAIL---------TGSYNSKNPHSIGRSYDIFDLKSDLETVFDYAGLSIEKCI 705 Query: 640 FESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + A P +YHP RS + + LG+FG+ HP IL + + + FE+ + ++P + Sbjct: 706 VSNQATPLYYHPTRSVNLALGKNL-LGHFGQIHPKILKHYDIKEEVFAFELNITNLPAPK 764 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 K K + + +S RD AFI+ + P G +++ I N + +L+ V +FD++ G Sbjct: 765 AKFGKRDEFI-ISDYQANFRDYAFIIARDQPVGEIISYINNFNKKLVKSVILFDIYSGDK 823 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS+AI+V +Q T +DD+ ++ N+ +K LR Sbjct: 824 LPSGKKSIAIRVGLQADDRTLNEDDLNSFSKDLIANIEQKFQGTLR 869 >gi|261379896|ref|ZP_05984469.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] gi|284797598|gb|EFC52945.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria subflava NJ9703] Length = 787 Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust. Identities = 270/813 (33%), Positives = 452/813 (55%), Gaps = 35/813 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWLK + D+S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFPYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 + A + I + +SSE + +D + C F ++ V P+WM+ Sbjct: 180 VSALTQCAFTPVEIQTASISSEKKQV---VRIDAPADCGRFISRVIENVNAKAPTPDWMK 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 237 QRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKTV 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ + +V+A + + S+AG++GG+ + D T ++++E A + P IA + G +D Sbjct: 297 TLADNTLVVADEKGVLSLAGLMGGEASAVSDETQNIVLEAAWFTPEIIAGKSRQYGFGSD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 357 SSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVELRLGRLKTVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 417 GVEIPAEQVEIILQHLGLQPEKTVEGFRVTSPSFRFDIEIEADLIEEIGRVYGYENI--- 473 Query: 476 PLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 PDDYTSGRLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTHPIRLQ 533 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGIR 592 NP++A + MR++L+ GL++ N++R +FE++ V+ D+ + Q G+ Sbjct: 534 NPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFRKDSADQFVQNERIGGLW 593 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 GS E G E+ R VD +D KAD +E + + F HPGR Sbjct: 594 YGSVLPEQWG--------EKIRNVDFYDMKAD----VESLLKNKEVSFVKTEHPALHPGR 641 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + I + ++V G+ GE HP L + L FE+ +D++ +K R +T +S Sbjct: 642 AANIVSDGKVV-GFVGELHPKWLQKYDLPQAPLVFEIDMDAVLGREKTRYQT-----VSK 695 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 P +RDLAF++ + + L+N +K ++L+ +++VFDV++G + EG KSVA+++++ Sbjct: 696 FQPARRDLAFVMPEAVTHDDLLNALKAAANKLVQEISVFDVYRGTGVPEGMKSVAVKIIL 755 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 Q +++T D+ I L+ ++++ +K +A LR+ Sbjct: 756 QDMENTLTDEVIEPLVAKMIKAAAEK-DAQLRA 787 >gi|157825703|ref|YP_001493423.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] gi|157799661|gb|ABV74915.1| phenylalanyl-tRNA synthetase subunit beta [Rickettsia akari str. Hartford] Length = 798 Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust. Identities = 283/812 (34%), Positives = 433/812 (53%), Gaps = 66/812 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLK L+T S+ +I + LT+IGLEVE+V ++ A L F + + S + +P D Sbjct: 1 MKFTLSWLKQLLETSASVTEIAEALTAIGLEVEEVIDKAAELQKFEVAYIASTKPHPSAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L K +Q+VCGA N R G+ V A G IP + IRG +S GM+C Sbjct: 61 KLKLCDVKTKSGMLQIVCGASNARAGMKVVLANIGIEIPNGKFKIKESIIRGEKSCGMLC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL+L+ +S I+EL DA VG + Y L DPI +++TPNR D +GV GIA DL Sbjct: 121 SEEELLLASESEGIIELSEDAVVGENFTKYYGLDDPIFVINVTPNRGDALGVYGIARDLS 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A GLG LKE+ I P + ++K + D C F ++ ++N +P+W+R+ LK Sbjct: 181 AKGLGILKELEI--PEIKSTFTSKMKLKVQDKEACPLFTFREIRNLKNKPSPDWLRKLLK 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR------------------- 280 VG+++IS+LVD+TNY+S G P HV+DA +I + V R Sbjct: 239 NVGVQTISSLVDVTNYISYSFGQPMHVYDADKIRGGIVVERYSSMSFPRRREANNAYGKS 298 Query: 281 -ACSGEKIL------------------------ALDNQEYDLSPDNVVIASDGRIQSIAG 315 A +K++ AL+ +EY L+ +++ I + IQ +AG Sbjct: 299 DALDSDKVIMASRLRGNDIDGGGDDNNDAITFHALNGKEYLLTENDLAIKDESGIQGLAG 358 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 +IGG + C D+TT++++E A ++ +A SG+ L I TD+RYR ER +D L Sbjct: 359 VIGGAKSSCTDSTTNIILEAACFNAKMVAASGRRLQIDTDARYRNERNIDRNFTEKALDI 418 Query: 376 IVSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS 434 +LILS+CG G S++ + + + F +++++GI + I++ IL +LGF Sbjct: 419 ATNLILSICGNGEVSEVVKCGEKEPQKKSLDFSAYYLEKITGIKLNIKEIEAILNKLGFV 478 Query: 435 VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR 494 + + +V PSWR D+ D+ EEI RIYG D+I+S LP +++ N + R Sbjct: 479 TDVKGEIIKVIAPSWRHDITILEDIAEEIARIYGYDKIESIKLP--ELDQDNNKLREHKR 536 Query: 495 TRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLK 554 KR+LAS+ EVV SF+S E + LF + EL +LNPIS + MR ++LP LL Sbjct: 537 ISSFKRILASKGYDEVVTNSFMSSEDAKLFAELKEELFLLNPISIRDNYMRPTILPNLLS 596 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 +N+ R++ D A FEV + + E Y+ A I SG + R Sbjct: 597 IASKNLARSVKDMAFFEVGPSFIDLNTEAT-YLTAII---------SGSYSNKNPHSLGR 646 Query: 615 FVDLFDAKADALSVIE-PFVSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFH 671 D+FD K D V++ +S+D +G P +YHP R+ I + LG+FG+ H Sbjct: 647 GYDVFDLKGDLELVVDYAGLSIDKCIATNGTALPQYYHPTRAVNIGLGKNL-LGHFGQIH 705 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P IL ++ ++ I FE+ + ++P+ + K K + +S RD AFIVDQ G Sbjct: 706 PKILKYYDINQEIFAFELNITNLPLIKAKFGKRDEFA-VSDFQASFRDYAFIVDQDHRVG 764 Query: 732 TLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGK 762 +++ I N + +L+ V +FD++ G L EGK Sbjct: 765 EIISYINNFNKKLVKSVILFDIYSGDKLPEGK 796 >gi|254669799|emb|CBA04112.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha153] Length = 787 Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust. Identities = 274/819 (33%), Positives = 456/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAGTAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 MSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGQFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + LS FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLSQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|319637853|ref|ZP_07992619.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria mucosa C102] gi|317401008|gb|EFV81663.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria mucosa C102] Length = 787 Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust. Identities = 269/814 (33%), Positives = 449/814 (55%), Gaps = 37/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWLK + D+ +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFPYSWLKTQANPDLFADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAP+G + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPIGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 + A + I + SI E K +D + C F ++ V P+WM Sbjct: 180 VSALTQCAFTPVEIQ----TASIGSEKKQAVRIDAPADCGRFISRVIENVNAKATTPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +V+A + + S+AG++GG+ + D T ++++E A + P IA + G + Sbjct: 296 VTLVDNTLVVADEKGVLSLAGLMGGEASAVSDETQNIVLEAAWFTPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+++P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVEIPAEQVEIILQHLGLQPEKTAEGFRVTSPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTHPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ D+ + Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFRKDSADQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GS E G E+ R VD +D KAD +E + + F HPG Sbjct: 593 WYGSVLPEQWG--------EKTRNVDFYDMKAD----VESLLKNKEVSFVKTKHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + ++V G+ GE HP L + L FE+ +D++ +K R +T +S Sbjct: 641 RAANIVSDGKVV-GFVGELHPKWLQKYDLPQAPLVFEIDMDAVLGREKTRYQT-----VS 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 P +RDLAF++ + + L+N +K ++L+ +++VFDV++G + EG KSVA++++ Sbjct: 695 KFQPARRDLAFVMPEAVTHDDLLNALKAAANKLVQEISVFDVYRGTGVPEGMKSVAVKII 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q +++T D+ I L+ ++++ +K +A LR+ Sbjct: 755 LQDMENTLTDEVIEPLVAKMIKAAAEK-DAQLRA 787 >gi|225076634|ref|ZP_03719833.1| hypothetical protein NEIFLAOT_01684 [Neisseria flavescens NRL30031/H210] gi|224952040|gb|EEG33249.1| hypothetical protein NEIFLAOT_01684 [Neisseria flavescens NRL30031/H210] Length = 787 Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust. Identities = 269/814 (33%), Positives = 451/814 (55%), Gaps = 37/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWL+ + D+S +K+ LT GLEVE++D A S + +V VE++PD D Sbjct: 1 MQFPYSWLRTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKFVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGANIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A + I + SI E K +D + C F ++ V + A P+WM Sbjct: 180 VSALTQCAFTPVEIQ----TASIGSEKKQAVRIDAPADCGRFISRVIENVNAHAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +V+A + S+AG++GG+ + D+T ++++E A + P IA + G + Sbjct: 296 VTLADNTLVVADEKGALSLAGLMGGEASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVELRLGRLKMV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+++P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVEIPAEQVEIILQHLGLQPEKTAEGFRVTSPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTNPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ D+ + Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFSKDSADQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GS E G E+ R VD +D KAD +E + + F HPG Sbjct: 593 WYGSVLPEQWG--------EKTRNVDFYDMKAD----VESLLKNKEVSFVKTEHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + V+G+ GE HP L + L FE+ +D++ +K R ++ +S Sbjct: 641 RAANIVSDGR-VIGFVGELHPKWLQKYDLPQAPLVFEIDMDAVLGREKTRYQS-----VS 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 P +RDLAF++ + + L+N +K ++L+ +++VFDV++G + EG KSVA++++ Sbjct: 695 KFQPARRDLAFVMPEAVTHDDLLNALKAAANKLVQEISVFDVYRGTGVPEGMKSVAVKII 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q +++T D+ I L+ ++++ +K +A LR+ Sbjct: 755 LQDMENTLTDEVIEPLVAKMIKAAAEK-DAQLRA 787 >gi|254804609|ref|YP_003082830.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] gi|254668151|emb|CBA04792.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha14] Length = 787 Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust. Identities = 276/819 (33%), Positives = 457/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA +IS L VRRA +GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKISGSLIVRRAKNGEILECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSDNTLVVADEKGALSLAGLMGGAASSVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F++++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRV-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|255066466|ref|ZP_05318321.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] gi|255049346|gb|EET44810.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria sicca ATCC 29256] Length = 787 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 268/814 (32%), Positives = 453/814 (55%), Gaps = 37/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A K+ I + P++ S P++I D + C F ++ V A P+WM Sbjct: 180 VSALTGCAFKQPAIHAAPITGSCKQPVQI----DAPADCGRFISRVIENVNARAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLDRSGVRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D+T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ + F + + Sbjct: 474 -PDDYTSGRLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWELDFAANANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFSKGSDGQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G++ E G+ + R D +D KAD +E + ++ F HPG Sbjct: 593 WYGAAMPEQWGK--------KTRNADFYDIKAD----VENLLKNKAVEFVKTEHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + + V+G+ GE HP L + L FE+ D + ++++T+ + V S Sbjct: 641 RAANIVSDGQ-VIGFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEREKTRYQAV---S 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 PV+RDLAF++ + + L+ +K ++L+ +++VFDV++G L EG KS+A++V+ Sbjct: 695 KFQPVRRDLAFVMPETMTHDDLLAALKGAANKLVQEISVFDVYRGTGLPEGMKSMAVKVI 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q +++T D+ + ++ +++ + A LRS Sbjct: 755 LQDMENTLTDETVEPVIGKLI-DAATAAGAQLRS 787 >gi|114319924|ref|YP_741607.1| phenylalanyl-tRNA synthetase beta subunit [Alkalilimnicola ehrlichii MLHE-1] gi|114226318|gb|ABI56117.1| phenylalanyl-tRNA synthetase beta subunit [Alkalilimnicola ehrlichii MLHE-1] Length = 797 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 271/832 (32%), Positives = 444/832 (53%), Gaps = 64/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+ + WL++ + E++ LT GLEV+ V+ A PFT + +++ E +PD Sbjct: 1 MRISEHWLREWVADTGPTEQLAHQLTMAGLEVDGVEP--AAPPFTGVVVARIVRCEPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + +QVVCGAPN R GL+ A G +P + + K+RG S G Sbjct: 59 ADKLRLCQVDAGQGEPLQVVCGAPNAREGLMAPLATVGGELP-GGLTIKRAKLRGQASFG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS+D+ +MELP DAPVG L DYL L D +I+V LTPNR+DC+G+ G+A Sbjct: 118 MLCSARELGLSEDAEGLMELPADAPVGRDLRDYLTLDDTVIEVDLTPNRADCLGMMGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLE-------IKFDLDDSSLCKGFAMCCVKGVRNNV 229 ++ A ++ P+ + +P E ++ LD C + V+G+ Sbjct: 178 EVGAL---------LAQPVHTPDMPAERARISDAVRVTLDAPDGCARYLGRVVRGLDPRA 228 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WMR+RL+ GLRS+ LVD+TNYV ++ G P H FD S++ + R GE + Sbjct: 229 ETPVWMRERLRRAGLRSLGPLVDVTNYVLMELGQPMHAFDLSQVRGGIHARWGRPGETLT 288 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 + + +L D +VIA D R ++AGI+GG+ + D+TTD+L+E A + P IA + Sbjct: 289 LIGGETIELRADQLVIADDERPLALAGIMGGEASSVGDDTTDILLECAWFAPTAIAGRAR 348 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVF 406 G+ TDS +RFERGVD G ++ L+LS+CGG A + A + PR+ + Sbjct: 349 AHGLHTDSSHRFERGVDPAGQHRAMERATHLLLSICGGEAGPVQEAVAEEHLPRRHPVRL 408 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ + G ++ + + +LERLG V G + V+ PSWR D+E + DL+EE+ R Sbjct: 409 RRQRIRLVLGTEIAGDTLIGMLERLGMRVETGGEGVWWVTPPSWRFDIEREEDLIEEVAR 468 Query: 466 IYGVDQI--KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +YG D++ + P+PLT + L + +++ L R E +++SF++ E Sbjct: 469 LYGYDRLPTRRPPIPLTVGQAPETL----TGLPRLRQALVQRGYHEAISYSFVAAEAQQA 524 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 + L + NPISAD++ MRTSL PGL++A N +R + +FE + + + Sbjct: 525 LDPEHQALALANPISADLAVMRTSLWPGLVQAARHNQNRQVQRIRLFETGLRFIGEAGDL 584 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ AG+ G E W++ R +D +D K D +++ + RF++ Sbjct: 585 RQEPRIAGLALGPVHPE----QWAEPG----RTLDFYDVKGDVEALLAAGGRAGAFRFQA 636 Query: 643 GAPSWYHPGRSGIIKTS--AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPG++ I S +G+ G HP + P+ FE+ L ++ Sbjct: 637 DHHPALHPGQTARILDSDHDHRPVGWLGALHPARARELDIQGPVFLFELDLSAV------ 690 Query: 701 RTKTKKVVHLSSLHPV------KRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDV 752 + HL + P+ +RDLA +V +PA TLV++ + ++L+ D+ +FDV Sbjct: 691 -----QAGHLPAFRPLSRYPANRRDLALLVADEVPAQTLVDVARAAGGEQLV-DIRLFDV 744 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + GK + EG+KSVA+ +++Q T D+D+ ++ R+VE + ++ AVLR Sbjct: 745 YAGKGVPEGRKSVAMGLILQDSSRTLTDEDMDRVLGRVVERLAQEAGAVLRG 796 >gi|224826509|ref|ZP_03699610.1| phenylalanyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] gi|224601110|gb|EEG07292.1| phenylalanyl-tRNA synthetase, beta subunit [Lutiella nitroferrum 2002] Length = 786 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 279/818 (34%), Positives = 447/818 (54%), Gaps = 48/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ ++ +S +++ LT GLEVE+V+ A S I +V V ++ + D Sbjct: 1 MQFSEQWLRSWVNPSLSTDELSYLLTMAGLEVEEVNAAAPAFSGVVIAEVKEVVKHENAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + IQ+VCGAPNV VGL A PG+ +P + + K+RG+ES GM+ Sbjct: 61 RLRVTKVDAGTGELIQIVCGAPNVAVGLKVPCALPGAVLP-GDFKIKPTKMRGVESGGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL + DD+ ++ LP DAPVG + DYL L D + + +TPNR+DC+ ++G+A ++ Sbjct: 120 CSGKELGVPDDADGLLVLPADAPVGTSIRDYLSLDDSLFTLKITPNRADCLSIKGLAREV 179 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 A L+ + I+ P +++P+ I D C + VKGV P+WM+ Sbjct: 180 AALTDSALQPMAIAPVVPAHDQTVPVRI----DAPQGCGRYIGRVVKGVDAAAPTPDWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 RL+ GLRSISA+VD+TNY+ L+ G P H FD +++ + VR A +GEK++ L+ QE Sbjct: 236 HRLERSGLRSISAIVDVTNYILLELGQPMHAFDLAKLDGAINVRMARAGEKLVCLNEQEV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L+ + +VIA D + +IAGI+GG +G + DV +E A + P IA + LG +D Sbjct: 296 ELTENLLVIADDAKPLAIAGIMGGLESGVTTASQDVFLESAFFAPAMIAGKARELGFGSD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S YRFERGVD Q ++ +LI+ +CGG A + A+ + + ++ V ++ Sbjct: 356 SSYRFERGVDFQLQRDAIERATALIVEICGGEAGPLTEAQGQLPQRPAVAVRSARVNKVL 415 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+ + + I RLG S + F V+ P++R D+E + DL+EE+ R+YG D I S+ Sbjct: 416 GLGLAPDSIADIFTRLGLSFDATAEGFAVAPPAFRFDIEIEEDLIEEVARVYGYDAIPSD 475 Query: 476 P-------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 LPL + R L QQ LA+R EVV+++F+ + F G Sbjct: 476 APRSRMKMLPLPETRRPRELIRQQ---------LAARDYQEVVSYAFVDERWERDFAGNP 526 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKY 586 ++++NPI+A MS MR++LL GL+ NV+R + +FEV+ + + + +G Q Sbjct: 527 DPVKLINPIAAQMSVMRSTLLGGLVDVLVGNVNRKQSRVRVFEVARTF-HKSADGFNQPE 585 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 AG+ GS E W K+E VD FD KAD +++ P + F Sbjct: 586 KIAGLAWGSRLPEQ----WGAKTER----VDFFDVKADVEALLHPH----PVEFRKATHP 633 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR I + ++V G GE HP + + LS+ FE L+ + ++ K Sbjct: 634 ACHPGRCADIFLAGQLV-GVIGELHPQWVQQYDLSSAPVVFE--LEYAVVEAQRHVKAAP 690 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 V S PV+RDLA +VD+ + G ++ + ++ +V +FDV++GK + EGKKS+ Sbjct: 691 V---SKFQPVRRDLALVVDEQVEVGAMLTSFRQAATEIVSEVALFDVYRGKGVPEGKKSL 747 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A +V++Q T D ++ ++ R+++ V A LR Sbjct: 748 AFRVVLQDQTKTLTDAEVETVVSRLLDAVSANHGATLR 785 >gi|254481860|ref|ZP_05095103.1| phenylalanyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] gi|214037989|gb|EEB78653.1| phenylalanyl-tRNA synthetase, beta subunit [marine gamma proteobacterium HTCC2148] Length = 791 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 449/818 (54%), Gaps = 41/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WL++ + ++S E + +T GLEV+ +D + + ++LS +++PD D Sbjct: 1 MIISEQWLREWVSPEISTEDLAHQITMAGLEVDAIDPVAGEFTGVLVAEILSAQQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I + TG + +Q+VCGAPN R GL A G +P N + K+RG ES GM+ Sbjct: 61 KLRICEVSTGA-ETVQIVCGAPNARAGLKAPLATVGGVLP-GNFKIKKAKLRGAESVGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+E+EL LSD S +MEL DAPVG L DYL+L D +I++ LTPNR+DC+G+ GIA ++ Sbjct: 119 CAEQELGLSDASDGLMELADDAPVGVDLRDYLKLDDRMIEIGLTPNRADCLGLAGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G L E+ + L E++P I+ +L C F ++G+ ++ +P W Sbjct: 179 -----GLLNELAVKASLI-EAVPASIEDSFPVELLAPERCPRFVSRVIRGIDISSPSPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ VGLRSI A+VD+TN+V ++ G P H FD ++ + VR A GE + LD Q Sbjct: 233 LQEKLRRVGLRSIDAVVDVTNFVMMELGQPMHAFDYGKLEGGVRVRTAEQGESLELLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +L + +VIA G+ ++AG++GG+ D+T D+ +EVA + P +A ++ G+ Sbjct: 293 TVELDNETLVIADQGKAVAMAGVMGGQGTAVSDSTVDLFLEVAFFTPELMAGKARSYGMH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TD+ +RFERGVD + ++ +L+L + GG A + + + P + + + + Sbjct: 353 TDASHRFERGVDFKLQATAMERATALLLEIVGGEAGPLQETVSEPHLPVRPDVSLRAARI 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++L G ++ E+ +RIL LG V + + +VPSWR D+ +ADL+EE+ R+YG ++ Sbjct: 413 QKLLGFEMDSEEVVRILAGLGLGVTATNEGWNCTVPSWRFDIAIEADLLEELARVYGYNR 472 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQ 528 LP+TQ+ + + ++ + + LA+R E + +SF+ + +F G Sbjct: 473 -----LPVTQINANLEIPSRPEQSLALSDLRCHLAARGYREAITYSFVDPKLQQMFDPGL 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS-HVYENDTPEGQKYM 587 + + + NPISADM+ MRTSLLPGL+ A RN +R +FE + Q Sbjct: 528 KPVALSNPISADMAVMRTSLLPGLVAAVLRNTNRQQPRVRMFETGLRFLPGEDGLKQVPS 587 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + GS E W+ S+ D FD K D S++E + +S F + Sbjct: 588 LAMVMTGSRFEEA----WNADSDAG----DFFDLKGDLESLLELTRASESFSFSVASRDA 639 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ +I E+V GY G HP++ GL+ P+ E+ L ++ + + Sbjct: 640 LHPGQTALIHRDEEVV-GYLGALHPSLCSELGLNAPLYACEITLSAL-----LQRDLPEF 693 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLA +VD+ +P+ L+ N+ + + D+T+FDV+ GK + +KS+A Sbjct: 694 AELSKFPEVRRDLAVLVDKTVPSHELMANVRASAGTYLTDLTLFDVYDGKGIDPKRKSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + + T D+D+ + +D++V+++ KK A LR+ Sbjct: 754 LGLTFRDSSRTLSDEDVNLAVDQVVDSLEKKYKAELRN 791 >gi|313668795|ref|YP_004049079.1| phenylalanyl-tRNA synthetase beta chain [Neisseria lactamica ST-640] gi|313006257|emb|CBN87719.1| putative phenylalanyl-tRNA synthetase beta chain [Neisseria lactamica 020-06] Length = 787 Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust. Identities = 275/823 (33%), Positives = 448/823 (54%), Gaps = 55/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAGTAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGTNIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNARAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSISALVDI NYV L+ G P HVFDA +IS L VRRA +GE + L+ + Sbjct: 238 RLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKISGSLIVRRAKNGEILECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSDNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ S +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLSRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANADPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFG-------------- 576 Query: 592 RKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 KGS G+ E G LW ++ E+ R VD +D KAD +E + ++ F Sbjct: 577 -KGSDGLFVQNERIGGLWYGAAMPEQWGEKTRNVDFYDIKAD----VENLLKNKAVEFVK 631 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R Sbjct: 632 TEHPAMHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQVPLVFEIDMAAVLECGKTRY 690 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 + +S PV+RDLAF++ + + L +K ++L+ +++VFDV++G L EG Sbjct: 691 RA-----VSKFQPVRRDLAFVMPEAMSHNELSAALKGAANKLVQEISVFDVYRGTGLPEG 745 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KSVA++V++Q +++T D+ + L+ ++V A LRS Sbjct: 746 MKSVAVKVILQDMENTLTDEAVEPLIGKLV-GAATAAGARLRS 787 >gi|316983710|gb|EFV62691.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis H44/76] gi|325200587|gb|ADY96042.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis H44/76] Length = 787 Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust. Identities = 274/826 (33%), Positives = 454/826 (54%), Gaps = 61/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVCVFEIARVFS------------ 576 Query: 590 GIRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 KGS G E G LW ++ + R D +D KAD +E + ++ F Sbjct: 577 ---KGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKAD----VENLLKNKAVEF 629 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K Sbjct: 630 VKTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGK 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSL 758 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 688 TRYRA-----VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGL 742 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ A LRS Sbjct: 743 PEGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|325203815|gb|ADY99268.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240355] Length = 787 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 273/819 (33%), Positives = 456/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F++++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|325197948|gb|ADY93404.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis G2136] Length = 787 Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 456/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAMERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R+R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RSRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGYPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGMGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|121634525|ref|YP_974770.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria meningitidis FAM18] gi|120866231|emb|CAM09971.1| putative phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis FAM18] Length = 787 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 455/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVNGLHILPEDAPVGINIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R+R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RSRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGYPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGMGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|241758588|ref|ZP_04756703.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] gi|241321240|gb|EER57412.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria flavescens SK114] Length = 787 Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust. Identities = 268/814 (32%), Positives = 450/814 (55%), Gaps = 37/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK + D+S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A + I + SI E K +D + C F ++ V A P+WM Sbjct: 180 VSALTQCAFTPVEIQ----TASIGSEKKQAVRIDAPADCGRFISRVIENVNAEAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +V+A + + S+AG++GG+ + D+T ++++E A + P IA + G + Sbjct: 296 VTLADNTLVVADEKGVLSLAGLMGGEASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L++ +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVVQICGGAAGEMVEAQGKLPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+++P + IL+ LG + F V PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVEIPAKQVEIILQHLGLQPEKTAEGFRVISPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTYPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ D+ + Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFSKDSADQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GS E G E+ R VD +D K D +E + + F HPG Sbjct: 593 WYGSVLPEQWG--------EKTRNVDFYDIKGD----VESLLKNKEVTFVKTEHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + IV G+ GE HP L + L FE+ +D++ +K R ++ +S Sbjct: 641 RAANIVSDGRIV-GFVGELHPKWLQKYDLPQAPLVFEIDMDAVLGREKTRYQS-----VS 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 +RDLAF++ + + L+N +K ++L+ +++VFDV++G + EG KSVA++++ Sbjct: 695 KFQAARRDLAFVMPEAVTHDDLLNALKAAANKLVQEISVFDVYRGTGVPEGMKSVAVKII 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q +++T D+ I L+ ++++ +K +A LR+ Sbjct: 755 LQDMENTLTDEVIEPLVAKMIKAAAEK-DAQLRA 787 >gi|325136048|gb|EGC58658.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M0579] gi|325202475|gb|ADY97929.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240149] gi|325207773|gb|ADZ03225.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis NZ-05/33] Length = 787 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 453/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAMERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+ EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAAHGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|325133757|gb|EGC56413.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M13399] Length = 787 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 271/819 (33%), Positives = 455/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAMERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+ EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAAHGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|59800751|ref|YP_207463.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA 1090] gi|194098030|ref|YP_002001078.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae NCCP11945] gi|239998493|ref|ZP_04718417.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|240013618|ref|ZP_04720531.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI18] gi|240016057|ref|ZP_04722597.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA6140] gi|240080199|ref|ZP_04724742.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|240112412|ref|ZP_04726902.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|240115152|ref|ZP_04729214.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|240120688|ref|ZP_04733650.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID24-1] gi|240122992|ref|ZP_04735948.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|240125244|ref|ZP_04738130.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|254493212|ref|ZP_05106383.1| phenylalanyl-tRNA synthetase subunit beta chain [Neisseria gonorrhoeae 1291] gi|260441030|ref|ZP_05794846.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|268594352|ref|ZP_06128519.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268596348|ref|ZP_06130515.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268598475|ref|ZP_06132642.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268600828|ref|ZP_06134995.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268681614|ref|ZP_06148476.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268683842|ref|ZP_06150704.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|291044362|ref|ZP_06570071.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|293399548|ref|ZP_06643701.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] gi|66773832|sp|Q5F9T6|SYFB_NEIG1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|59717646|gb|AAW89051.1| putative phenylalanyl-tRNA synthetase beta-subunit [Neisseria gonorrhoeae FA 1090] gi|193933320|gb|ACF29144.1| phenylalanyl-tRNA synthetase beta subunit [Neisseria gonorrhoeae NCCP11945] gi|226512252|gb|EEH61597.1| phenylalanyl-tRNA synthetase subunit beta chain [Neisseria gonorrhoeae 1291] gi|268547741|gb|EEZ43159.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae 35/02] gi|268550136|gb|EEZ45155.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae FA19] gi|268582606|gb|EEZ47282.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae MS11] gi|268584959|gb|EEZ49635.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID18] gi|268621898|gb|EEZ54298.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID332] gi|268624126|gb|EEZ56526.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-92-679] gi|291011256|gb|EFE03252.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae DGI2] gi|291610117|gb|EFF39239.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria gonorrhoeae F62] gi|317163771|gb|ADV07312.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae TCDC-NG08107] Length = 787 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 270/825 (32%), Positives = 457/825 (55%), Gaps = 59/825 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK + D+S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + P + +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 + A + I + P+ SE + +D + C F ++ V A P+WM+ Sbjct: 180 VSALTQCAFTPVEIQTAPIGSEK---KQAVRIDAPADCGRFISRVIENVNAKAATPDWMK 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 237 QRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKTV 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ + +V+A + S+AG++GG + D T ++++E A ++P I + G +D Sbjct: 297 TLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFEPEIIVGKSRQYGFGSD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 357 SSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLGRLKTVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI--- 472 G+D+P E IL+ LG + F ++ PS+R D+E +ADL+EEI R+YG + I Sbjct: 417 GVDIPAEQVETILQHLGLQPEKTAEGFRITAPSFRFDIEIEADLIEEIGRVYGYENIPDD 476 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 S L ++++ + R R R+ V +A+R EV++++F+ ++ + F Sbjct: 477 YTSGRLKMSELPETR-------RPRFAVYNEMAARGYREVISYAFVDEQWELDFAANAAP 529 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 530 IRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIACVF-------------- 575 Query: 591 IRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 KGS G E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 576 -GKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFV 630 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K Sbjct: 631 KTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKT 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 689 RYRA-----VSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGTGLP 743 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ V + A LRS Sbjct: 744 EGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GVATEAGARLRS 787 >gi|240117436|ref|ZP_04731498.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268603133|ref|ZP_06137300.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] gi|268587264|gb|EEZ51940.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae PID1] Length = 787 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 270/825 (32%), Positives = 457/825 (55%), Gaps = 59/825 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK + D+S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAARAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + P + +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 + A + I + P+ SE + +D + C F ++ V A P+WM+ Sbjct: 180 VSALTQCAFTPVEIQTAPIGSEK---KQAVRIDAPADCGRFISRVIENVNAKAATPDWMK 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 237 QRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKTV 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ + +V+A + S+AG++GG + D T ++++E A ++P I + G +D Sbjct: 297 TLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFEPEIIVGKSRQYGFGSD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 357 SSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLGRLKTVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI--- 472 G+D+P E IL+ LG + F ++ PS+R D+E +ADL+EEI R+YG + I Sbjct: 417 GVDIPAEQVETILQHLGLQPEKTAEGFRITAPSFRFDIEIEADLIEEIGRVYGYENIPDD 476 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 S L ++++ + R R R+ V +A+R EV++++F+ ++ + F Sbjct: 477 YTSGRLKMSELPETR-------RPRFAVYNEMAARGYREVISYAFVDEQWELDFAANAAP 529 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 530 IRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIACVF-------------- 575 Query: 591 IRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 KGS G E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 576 -GKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFV 630 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K Sbjct: 631 KTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKT 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 689 RYRA-----VSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGTGLP 743 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ V + A LRS Sbjct: 744 EGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GVATEAGARLRS 787 >gi|304387970|ref|ZP_07370142.1| phenylalanyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] gi|304337969|gb|EFM04107.1| phenylalanyl-tRNA synthetase beta subunit [Neisseria meningitidis ATCC 13091] Length = 787 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 273/819 (33%), Positives = 453/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVCVFEIARVFSKGSDGQFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G+ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAVMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRV-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|298369376|ref|ZP_06980694.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] gi|298283379|gb|EFI24866.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria sp. oral taxon 014 str. F0314] Length = 787 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 266/814 (32%), Positives = 451/814 (55%), Gaps = 37/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P + + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GSFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A K+ I + P++ S P++I D + C F ++ V A P+WM Sbjct: 180 VSALTGCAFKQPAIHAAPITGSRKQPVQI----DAPADCGRFISRVIENVNARAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D+T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEALGRLPENKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWEHDFAANANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFSKGSDGQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G++ E G+ + R D +D KAD +E + ++ F HPG Sbjct: 593 WYGAAMPEQWGK--------KTRNADFYDIKAD----VENLLKNKAVEFVKTEHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + +I+ G+ GE HP L + L FE+ D + ++++T+ + V S Sbjct: 641 RAANIVSDGQII-GFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEREKTRYQAV---S 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 PV+RDLAF++ + + L+ + ++L+ +++VFDV++G L EG KS+A++V+ Sbjct: 695 KFQPVRRDLAFVMSETMTHDDLLAALNGAANKLVQEISVFDVYRGTGLPEGMKSMAVKVI 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q +++T D+ + ++ +++ + A LRS Sbjct: 755 LQDMENTLTDETVEPVIGKLI-DAATAAGAQLRS 787 >gi|325267385|ref|ZP_08134046.1| phenylalanyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] gi|324981180|gb|EGC16831.1| phenylalanyl-tRNA synthetase beta subunit [Kingella denitrificans ATCC 33394] Length = 786 Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust. Identities = 267/802 (33%), Positives = 446/802 (55%), Gaps = 38/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGTNIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A K+ I + P++ S P++I D + C F ++ V A P+WM Sbjct: 180 VSALTGCAFKQPAIHAAPITGSRKQPVQI----DAPTDCGRFISRVIENVNARAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D+T ++++E A + IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDDTQNIVLEAAWFASEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLVLPETRRPRFAVYNEMAARGYREVVSYAFVDEQWEHDFAANANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---QKYMAAG 590 NP++A + MR++L+ GL++ N++R + +FE++ V+ D+ +G Q G Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQSRVRVFEIARVFSKDS-DGQFVQNERIGG 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G++ E G E+ R D +D KAD ++ + ++ F HP Sbjct: 592 LWYGAAMPEQWG--------EKTRNADFYDIKAD----VKNLLKNKAVEFVKTEHPALHP 639 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GR+ I + + V+G+ GE HP L + L FE+ D + ++++T+ + V Sbjct: 640 GRAANIVSDGQ-VIGFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEREKTRYQAV--- 693 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S PV+RDLAF+V + L ++ V LI ++T+FDV++G L E KS+A++V Sbjct: 694 SKFQPVRRDLAFVVPEATTFEQLQAALRGVKSELIQEITLFDVYRGAGLPENHKSMALKV 753 Query: 770 LIQPLKDTFRDDDIRILMDRIV 791 ++Q +DT D+ + ++ +V Sbjct: 754 ILQSTEDTLTDEVVEPIVAELV 775 >gi|309378772|emb|CBX22598.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 787 Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust. Identities = 273/823 (33%), Positives = 446/823 (54%), Gaps = 55/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKPGIRVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGTNIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNARAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSISALVDI NYV L+ G P HVFDA +IS L VRRA +GE + L+ + Sbjct: 238 RLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKISGSLIVRRAKNGEILECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSDNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ S +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLSRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAAPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFG-------------- 576 Query: 592 RKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 KGS G E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 577 -KGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFVK 631 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R Sbjct: 632 TEHPALHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRY 690 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 + +S PV+RDLAF++ + + L +K ++L+ +++VFDV++G L EG Sbjct: 691 RA-----VSKFQPVRRDLAFVMPEAMSHNELSAALKGAANKLVQEISVFDVYRGTGLPEG 745 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KSVA++V++Q +++T D+ + L+ ++V A LRS Sbjct: 746 MKSVAVKVILQDMENTLTDEAVEPLIGKLV-GAATAAGARLRS 787 >gi|261365587|ref|ZP_05978470.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] gi|288565912|gb|EFC87472.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria mucosa ATCC 25996] Length = 787 Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust. Identities = 270/821 (32%), Positives = 450/821 (54%), Gaps = 51/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKIQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A K+ I+ + S P++I D + C F ++ V A P+WM Sbjct: 180 VSALTGCAFKQPAIHPASITGSRKQPVQI----DAPADCGRFISRVIENVNARAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLDRSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKI 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D+T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEALGELPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPTEQVETILQHLGLQPEKTAEGFRVTGPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ + F + + Sbjct: 474 -PDDYTSGRLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWELDFAANANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP++A + MR++L+ GL++ N++R +FE++ V+ K Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFS---------------K 577 Query: 594 GSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GS G E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 578 GSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFVKTE 633 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I + +I+ G+ GE HP L + L FE+ D + ++++T+ Sbjct: 634 HPALHPGRATNIVSDGQII-GFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEREKTRY 690 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 + V S PV+RDLAF++ + + L+ +K ++L+ +++VFDV++G L EG K Sbjct: 691 QAV---SKFQPVRRDLAFVMPEAMTHDDLLVALKGAANKLVQEISVFDVYRGTGLPEGMK 747 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A++V++Q +++T D+ + ++ +++ + A LRS Sbjct: 748 SMAVKVILQDMENTLTDETVEPVIGKLI-DAATAAGAQLRS 787 >gi|88607372|ref|YP_504917.1| phenylalanyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] gi|88598435|gb|ABD43905.1| phenylalanyl-tRNA synthetase, beta subunit [Anaplasma phagocytophilum HZ] Length = 792 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 290/818 (35%), Positives = 442/818 (54%), Gaps = 45/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+F SWL D LD S + + D L+SIG+E V+ F + KVL V +PD Sbjct: 1 MRFAYSWLLDCLDAGCSAQVLVDELSSIGVEAALVEGGVKQGSFVVAKVLEVLAHPDAHK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++ G + +Q+VCGA NVR G++ V A G+ I E+ + ++ IRGIES+GM+C Sbjct: 61 LKVCKVYDGV-EVLQIVCGASNVRSGMITVLARVGAYIQESGITISKAVIRGIESSGMLC 119 Query: 120 SEKELMLS---DDSASIMELP--IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 S +EL +S D S+ I++L + VG D++ + II+VS+TPNR DC+GV GI Sbjct: 120 SLEELGMSSSWDPSSGIVDLSESSEYAVG---EDFIP-QEEIIEVSVTPNRGDCLGVYGI 175 Query: 175 ALDLVAAGLGKLKEINI---SCPLSSESIPLEIKFDLDDSSLCKGFAM-CCVKGVRNNVA 230 A +L AAG+G LKE+ + L S L+++ D G M C +K + N A Sbjct: 176 ARELAAAGMGSLKELPVVGGDAALCKPSFALDMRVD--------GLIMGCSIKSISNKSA 227 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 P W+R+RL A G++++S +VDI NYV + P HV+DA +I L V + G+ I Sbjct: 228 SPRWIRERLLAAGVKTVSCVVDIVNYVMMLLNRPMHVYDADKIKGAALIVEKVARGDCI- 286 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 A++ ++Y+L+ D V+ +DG + IAGI+G + + C +T ++ +E A +DP++IA S + Sbjct: 287 AINGKKYELAGDVVIRDADGIVHCIAGIMGSEQSKCTSDTENIFIESAWYDPVDIALSSR 346 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L + TDS YRF R VD + + L + LI CGG S++ I+ + K I F Sbjct: 347 RLRLNTDSSYRFARYVDPKLVGFGLNYAAYLISKYCGGEVSEVVISGSAPNKAAHIEFDP 406 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V ++ + + E L ILE LGF + + + V VPSWR DV DLVEE+LRI+ Sbjct: 407 EIVSKIGSVSIDRERILSILESLGFVIDAASGELWRVEVPSWRNDVSSPHDLVEEVLRIH 466 Query: 468 GVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D I+ E LP +E K N ++ S V+ + S+ + EV+ WSF++ G Sbjct: 467 GYDAIQEQEVLPARVLERKAN-AVDDSLNNRVRASMLSQGLTEVITWSFLAGAVVEKMGF 525 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 +L I NPIS + MR S+LP LL+ N ++FE+ VY + Sbjct: 526 SVEDLYIDNPISNQFNVMRPSVLPNLLQVVSNNQACGRDSISVFELGDVY--IALDRSDC 583 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAP 645 + G+R G+ R D FD KAD V F +S L F + Sbjct: 584 VVCGVRAGND--------LPRNPHASIRKFDFFDVKADIERVFLQFGISEADLEFRASTR 635 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + HP RS + ++ GY GE HP+ ++FF L + + FEV+L + + K + Sbjct: 636 DYLHPSRSADVYCQG-LLCGYVGELHPSFVEFFELKDKVACFEVFLSGL---SSQEEKVR 691 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 L+ VKRD AFI+D+ I A LV +IK V R ++DV+VFDV+ G ++ EGK S+ Sbjct: 692 GGFFLNKYQVVKRDFAFILDKEIKARELVTVIKAV-RYVEDVSVFDVYSGVNIPEGKVSI 750 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ V+I T + +I+ + D I+E+V ++ + LR Sbjct: 751 AVAVVITSGLGTMTEAEIKEVSDSIIESVKRELHGQLR 788 >gi|325131818|gb|EGC54518.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M6190] gi|325137868|gb|EGC60443.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis ES14902] Length = 787 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 271/819 (33%), Positives = 454/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAMERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+ EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAAHGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|261377867|ref|ZP_05982440.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] gi|269145716|gb|EEZ72134.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria cinerea ATCC 14685] Length = 787 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 260/800 (32%), Positives = 441/800 (55%), Gaps = 32/800 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWL+ + D+S +K+ LT GLEVE++D A S + +V S+E++PD D Sbjct: 1 MQFPYSWLRTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGANIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A + I + SI E K +D + C F ++ V A P+WM Sbjct: 180 VSALTQCAFTPVEIQ----TASIGSEKKQAVRIDAPADCGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +V+A + S+AG++GG+ + +T ++++E A + P IA + G + Sbjct: 296 VTLADNTLVVADEKGALSLAGLMGGEASAVSGDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+++P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVEIPAEQVEIILQHLGLQPEKTAEGFRVTSPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETKRPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANTNPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP++A + MR++L+ GL++ N++R +FE++ V+ D+ A ++ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRVFEIARVFSKDS------AAQFVQN 586 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 G G + ++ E+ R VD +D KAD +E + + F HPGR+ Sbjct: 587 ERIGGLWYGSVLPEQWGEKTRNVDFYDMKAD----VESLLKNKEVSFVKTEHPALHPGRA 642 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 I + V+G+ GE HP L + L FE+ +D + +K R ++ +S Sbjct: 643 ANIVSDGR-VIGFVGELHPKWLQKYDLPQAPLVFEIDMDEVLGRKKTRYQS-----VSKF 696 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 P +RDLAF++ + + L+N +K ++L+ ++ VFDV++G + EG KSVA+++++Q Sbjct: 697 QPARRDLAFVMLEAVTHDDLLNALKAAANKLVQEINVFDVYRGTGVPEGMKSVAVKIILQ 756 Query: 773 PLKDTFRDDDIRILMDRIVE 792 +++T D+ I ++ ++++ Sbjct: 757 DMENTLTDEVIEPVIGKLID 776 >gi|308388918|gb|ADO31238.1| putative phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha710] gi|325129889|gb|EGC52692.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis OX99.30304] Length = 787 Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust. Identities = 274/826 (33%), Positives = 451/826 (54%), Gaps = 61/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGINIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVCVFEIARVFS------------ 576 Query: 590 GIRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 KGS G E G LW ++ + R D +D KAD +E + ++ F Sbjct: 577 ---KGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKAD----VENLLKNKAVEF 629 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K Sbjct: 630 VKTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGK 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSL 758 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 688 TRYRV-----VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGL 742 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ A LRS Sbjct: 743 PEGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|261400409|ref|ZP_05986534.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] gi|269209854|gb|EEZ76309.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria lactamica ATCC 23970] Length = 787 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 274/823 (33%), Positives = 447/823 (54%), Gaps = 55/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAGTAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKPGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + L DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILSQDAPVGTNIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNARAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSISALVDI NYV L+ G P HVFDA +IS L VRRA +GE + L+ + Sbjct: 238 RLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKISGSLIVRRAKNGEILECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSDNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ S +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLSRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPAEQVETILQHLGLRPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANADPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFG-------------- 576 Query: 592 RKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 KGS G+ E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 577 -KGSDGLFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFVK 631 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I S +V+G+ GE HP L + L FE+ D + + +T Sbjct: 632 TEHPAMHPGRAANI-VSDGLVIGFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEYGKT 688 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 + + V S PV+RDLAF++ + + L +K ++L+ +++VFDV++G L EG Sbjct: 689 RYRAV---SKFQPVRRDLAFVMPEAMSHNELSAALKGAANKLVQEISVFDVYRGTGLPEG 745 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KSVA++V++Q +++T D+ + L+ ++V A LRS Sbjct: 746 MKSVAVKVILQDMENTLTDEAVEPLIGKLV-GAATAAGARLRS 787 >gi|296314670|ref|ZP_06864611.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] gi|296838497|gb|EFH22435.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria polysaccharea ATCC 43768] Length = 787 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 275/826 (33%), Positives = 452/826 (54%), Gaps = 61/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGINIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 + A G + EI+ + S P++I D + C F ++ V V P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQI----DAPADCGRFISRVIENVNAKAVTPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ S+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPSEQVETILQHLGLQPEKTAEGFRVTASSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVF------------- 575 Query: 590 GIRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 KGS G E G LW ++ + R D +D KAD +E + ++ F Sbjct: 576 --GKGSDGWFVQNEHIGSLWYGAAMPEQWGGKTRNADFYDIKAD----VENLLKNKAVEF 629 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K Sbjct: 630 VKTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGK 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSL 758 R + +S PV+RDLAF++ + + L+ ++K ++L+ ++ VFDV++G L Sbjct: 688 TRYRA-----VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEIGVFDVYRGTGL 742 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ ++V A LRS Sbjct: 743 PEGMKSVAVKVILQDMENTLTDEAVEPLIGKLV-GAATAAGARLRS 787 >gi|330503834|ref|YP_004380703.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] gi|328918120|gb|AEB58951.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas mendocina NK-01] Length = 792 Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust. Identities = 280/821 (34%), Positives = 443/821 (53%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ DVS + + L+ +GLEV+ V A S + ++LS E++PD D Sbjct: 1 MKFSEQWLRTWVNPDVSRDDLVARLSMVGLEVDAVQPVAGAFSGVVVGEILSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNARAGIKIPFAMIGAELP-GDFKIKKAKLRGVESQGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD++ +MEL DAPVG + YL L D I++ LTPNR DC+ + G+A ++ Sbjct: 119 CSASELQISDDNSGLMELAADAPVGQDIRAYLNLDDVSIEIGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G + +S P++ E++ L E++ ++ C + V+ V + P W Sbjct: 179 -----GAMYSAAVS-PVAIEAVALVHDEVRPVEVLAPKACPRYLGRVVRNVDLSRPTPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Q Sbjct: 233 MVERLRRSDIRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L D +VIA GR +IAG++GG+H+G D T D+ +E A +D I +A ++ G+ Sbjct: 293 EVSLRADTLVIADHGRALAIAGVMGGEHSGVSDTTRDLFLESAFFDNIAVAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS +RFERGVD Q ++ +L+L + GG A I + T P I + Sbjct: 353 TDSSHRFERGVDSQLARQAMERATALLLEIVGGEAGPIIEVSSETDLPSAAPITLRAERI 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+D+ + R+L LG SV + +++VSVPS R D+ + DL+EE+ R+YG + Sbjct: 413 SQMLGMDMDGAEVERLLTALGLSVSAQGAGQWQVSVPSHRFDISLEVDLIEELGRLYGYN 472 Query: 471 QI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ ++ P + E + L ++R+L +R E + +SFI + LF Sbjct: 473 RLPVRYPQARLAPQVKAEARAELP-------ALRRLLVARGYQEAITYSFIDPKLFELFT 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 G L++ NPISADM+ MR+SL PGL+KA N++R + +FE + EG Sbjct: 526 PGVEPLQLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLQ 584 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W++ E VD +D KAD +++ + D+ F G Sbjct: 585 QEAMIAGVISGSRLPEG----WANSREN----VDFYDLKADVEALLGYAGAADAFSFVPG 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I+ +V G+ G HP + GL P+ FE+ L + + Sbjct: 637 EHPALHPGQTARIERGGRLV-GFIGALHPELAKTLGLDQPVFLFELVLAEVAAG-----R 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 LS V+RDLA +VD+ PA +++ I+ N + D+ +FDV+ GK + + Sbjct: 691 MPAFSELSRFPEVRRDLALLVDREQPADAVLSAIRENAGEWLTDLKLFDVYHGKGIDPLR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ + ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVSTTTQNILTCLEQRFNATLR 791 >gi|161869669|ref|YP_001598836.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria meningitidis 053442] gi|161595222|gb|ABX72882.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis 053442] gi|261392904|emb|CAX50485.1| phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain; PheRS) [Neisseria meningitidis 8013] Length = 787 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 271/826 (32%), Positives = 454/826 (54%), Gaps = 61/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVCVFEIARVFS------------ 576 Query: 590 GIRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 KGS G E G LW ++ + R D +D KAD +E + ++ F Sbjct: 577 ---KGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKAD----VENLLKNKAVEF 629 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++G P+ HPGR+ I + + V+G+ GE HP L + L FE+ + ++ + Sbjct: 630 VKTGHPA-LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGE 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSL 758 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 688 TRYRA-----VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGL 742 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ A LRS Sbjct: 743 PEGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|240127698|ref|ZP_04740359.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268686083|ref|ZP_06152945.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] gi|268626367|gb|EEZ58767.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria gonorrhoeae SK-93-1035] Length = 787 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 269/825 (32%), Positives = 456/825 (55%), Gaps = 59/825 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK + D+S +K+ LT GLEVE++D A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + P + +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLP-GNFKIKPTKMRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 + A + I + P+ SE + +D + C F ++ V A P+WM+ Sbjct: 180 VSALTQCAFTPVEIQTAPIGSEK---KQAVRIDAPADCGRFISRVIENVNAKAATPDWMK 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L VRRA +GE + L+ + Sbjct: 237 QRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLIVRRAQNGETLACLNEKTV 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ + +V+A + S+AG++GG + D T ++++E A ++P I + G +D Sbjct: 297 TLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFEPEIIVGKSRQYGFGSD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 357 SSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLGRLKTVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI--- 472 G+D+P E IL+ LG + F ++ PS+R D+E +ADL+EEI R+YG + I Sbjct: 417 GVDIPAEQVETILQHLGLQPEKTAEGFRITAPSFRFDIEIEADLIEEIGRVYGYENIPDD 476 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 S L ++++ + R R R+ V +A+R EV++++F+ ++ + F Sbjct: 477 YTSGRLKMSELPETR-------RPRFAVYNEMAARGYREVISYAFVDEQWELDFAANAAP 529 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NP++A + MR++L+ GL++ N++R +FE++ V+ Sbjct: 530 IRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIACVF-------------- 575 Query: 591 IRKGSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 KGS G E G LW ++ E+ R D +D KAD +E + ++ F Sbjct: 576 -GKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKAD----VENLLKNKAVEFV 630 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ++G P+ HPGR+ I + + V+G+ GE H L + L FE+ + ++ K Sbjct: 631 KTGHPA-LHPGRAANIVSDGK-VIGFVGELHSKWLQKYDLPQAPLVFEIDMAAVLECGKT 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 R + +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L Sbjct: 689 RYRA-----VSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGTGLP 743 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG KSVA++V++Q +++T D+ + L+ +++ V + A LRS Sbjct: 744 EGMKSVAVKVILQDMENTLTDEAVEPLIGKLI-GVATEAGARLRS 787 >gi|15676626|ref|NP_273770.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria meningitidis MC58] gi|12644581|sp|Q9K089|SYFB_NEIMB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|7225955|gb|AAF41141.1| phenylalanyl-tRNA synthetase, beta chain [Neisseria meningitidis MC58] gi|325140116|gb|EGC62645.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis CU385] Length = 787 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 452/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG S GM+ Sbjct: 61 RLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGEVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 + A G + EI+ + S P++I D C F ++ V P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNARATTPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVCVFEIARVFSKGSDGQFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G+ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAVMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRV-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|218767849|ref|YP_002342361.1| phenylalanyl-tRNA synthetase subunit beta [Neisseria meningitidis Z2491] gi|12644580|sp|Q9JVA0|SYFB_NEIMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|121051857|emb|CAM08163.1| putative phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis Z2491] gi|319410096|emb|CBY90432.1| phenylalanyl-tRNA synthetase beta chain (phenylalanine-tRNA ligase beta chain; PheRS) [Neisseria meningitidis WUE 2594] Length = 787 Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust. Identities = 270/817 (33%), Positives = 452/817 (55%), Gaps = 43/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDVGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNAKAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 238 RLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEVKQVGLRLGRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPSEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F++++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANADPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAA 589 + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNERIG 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWY 648 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 591 GLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGYPA-L 637 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 638 HPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA---- 692 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S PV+RDLAF++ + + L+ ++K ++L+ +++VFDV++G L EG KSVA+ Sbjct: 693 -VSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGMGLPEGMKSVAV 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +V++Q +++T D+ + L+ +++ A LRS Sbjct: 752 KVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|325127848|gb|EGC50755.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis N1568] Length = 787 Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust. Identities = 269/817 (32%), Positives = 451/817 (55%), Gaps = 43/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDVGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNAKAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 238 RLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F+ ++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANADPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAA 589 + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGQFVQNERIG 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWY 648 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 591 GLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA-L 637 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 638 HPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA---- 692 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S PV+RDLAF++ + + L+ +++ ++L+ +++VFDV++G L EG KSVA+ Sbjct: 693 -VSKFQPVRRDLAFVMPEAMSHDDLLLVLEGAANKLVQEISVFDVYRGTGLPEGMKSVAV 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +V++Q +++T D+ + L+ +++ A LRS Sbjct: 752 KVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|90021229|ref|YP_527056.1| phenylalanyl-tRNA synthetase subunit beta [Saccharophagus degradans 2-40] gi|89950829|gb|ABD80844.1| phenylalanyl-tRNA synthetase beta subunit [Saccharophagus degradans 2-40] Length = 816 Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust. Identities = 288/835 (34%), Positives = 445/835 (53%), Gaps = 65/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ SWL++ ++ + S ++I D LT GLEV+ V+ IV +++ +++PD D Sbjct: 15 MKFSESWLREWVNPNASTQQIVDQLTMAGLEVDAVEPVAGTFNGVIVGEIIDAQQHPDAD 74 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP--ENNMIVNVRK--IRG 111 C + + G E QVVCGAPN RVGL +A G+ +P E+ ++K +RG Sbjct: 75 KLRVCTVAGLPEG---ETQVVCGAPNARVGLKIPFATVGASLPPGEDGKPFKIKKAKLRG 131 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+C + EL DD + ELP DAPVG L +YL L+D +I+V LTPNRSDC+ + Sbjct: 132 VESFGMLCGQTELQAGDDDEGLWELPADAPVGQDLREYLSLNDNLIEVDLTPNRSDCLSI 191 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVR-N 227 +G+A +L G L +I + P+ + P + L S C + +KG+ Sbjct: 192 KGLAREL-----GVLSKIEVKAPVIAAVEPQISDVLSVALSAGSACSRYVGRVIKGIDVA 246 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P W++++L+ G+RSI A+VD+TNYV ++ G P H FD ++I+ + VR A + E++ Sbjct: 247 KPSPLWLQEKLRRSGIRSIDAVVDVTNYVLIELGQPMHAFDLAKINGGINVRLANAKEEL 306 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L++Q+ +L D +VIA + ++AGI+GG+ + T D+ +E A ++PI IA Sbjct: 307 TLLNDQKVELKEDTLVIADESGALAMAGIMGGEASAVTSATQDIFLESAFFEPIAIAGRA 366 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 ++ G+ TDS +RFERGVD G ++ +L+L + GG A + +A + P Sbjct: 367 RSYGLHTDSSHRFERGVDYNGAQAAIERATALLLEIVGGQAGPVIVAESQQDLPSVSNVN 426 Query: 408 NSEVKRLSGI-----DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVE 461 S+ + SG+ DV +ED IL RLG ++ + + +VPS+R DV +ADL+E Sbjct: 427 LSKARIESGLGFAIPDVEVED---ILTRLGLKLVERNESGWTFAVPSYRFDVAIEADLLE 483 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISK 518 E+ RIYG + LP T V L + + R+ LASR EV+ +SF+ Sbjct: 484 ELARIYGYNN-----LPTTTVRIPAQLPSKTETVTKLDRIKDHLASRGYREVITYSFVDP 538 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 L G Q + I+NPIS+DM MRTSLLPGLL +NV R + IFE + Sbjct: 539 ALQNLINGEQANVPIINPISSDMGIMRTSLLPGLLNTLSKNVKRQVQRVRIFESGLTFVA 598 Query: 577 ----ENDTPEG--QKYMAAGIRKGSSGIEGSGRLW-SDKSEERCRFVDLFDAKADALSVI 629 ++ T EG Q M AG+ G+ G W +DK + VD +D K D S++ Sbjct: 599 PEGMDSQTLEGLTQPSMFAGLIYGARAPVG----WHADKDD-----VDFYDIKGDLESLL 649 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + ++ FES HPG++ +K A +GY G HP + L FEV Sbjct: 650 A--FTGQAVTFESAEVKALHPGQTAKVKL-AGTEIGYIGALHPEVAKQLDLPKAAYVFEV 706 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVT 748 LD+I K+ K LS V RD+A +VD+ + L I++V + ++ Sbjct: 707 SLDAI-----KQAKVPAFTALSRYPEVARDIAILVDKGVNGAALEAEIRSVAGDYLKNLK 761 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+ GK + +KS+A ++ Q T +D+I M IV+ + + NA LR Sbjct: 762 IFDVYSGKGIDPQRKSIAFNLIFQHPSRTLTEDEISAPMAEIVKKLEQSFNAQLR 816 >gi|238022787|ref|ZP_04603213.1| hypothetical protein GCWU000324_02698 [Kingella oralis ATCC 51147] gi|237865990|gb|EEP67126.1| hypothetical protein GCWU000324_02698 [Kingella oralis ATCC 51147] Length = 802 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 266/800 (33%), Positives = 431/800 (53%), Gaps = 37/800 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+F SWL H + ++S +++ LT GLEVE+ A S + +V SVE++PD D Sbjct: 20 MQFPHSWLTQHANPNLSPDQLAHLLTMAGLEVEETAPAAPAFSGVVVAEVKSVEKHPDAD 79 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNVRVG A G+ +PEN + K+RG+ES GM+ Sbjct: 80 RLNVTQVDAGTGELLQIVCGAPNVRVGAKVPCALAGAVLPEN-FKIKPTKMRGVESNGML 138 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL D ++ LP DAPVG + DYL+L D + + +TPNR+DC+ ++GIA ++ Sbjct: 139 CSAKELGNDDGVNGLLILPDDAPVGMNIRDYLDLDDTLFTLKITPNRADCLSIKGIAREV 198 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 A ++ I S + +K D C F ++GV A P W+ QR Sbjct: 199 AALTGCDFRQPEIKAMPVSSAKTQAVKIAAPDD--CGVFFTRVIEGVNARAASPAWLVQR 256 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L G+RS+SALVDI NYV L+ G P HVFDA ++S LTVRRA + E + L+++ +L Sbjct: 257 LARCGIRSVSALVDIGNYVMLEIGQPMHVFDADKLSGCLTVRRAQNDETLACLNDKTVEL 316 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S + +V+A + SIAG++GG+ + D+T ++++E A + P IA + G +DS Sbjct: 317 SDNTLVVADEAAALSIAGLMGGEASAVSDDTQNIVLESAWFAPDIIAGKSRQYGFGSDSS 376 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERGVD Q ++ L+L +CGG A +I A + + S V ++ G+ Sbjct: 377 FRFERGVDTQIQRDAIERASELVLQICGGAAGEIVSAAGRQPENHTVNVRTSRVAKILGV 436 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI----K 473 D+ IL LG D F V PS+R D+E +ADL+EEI R++G + I Sbjct: 437 DIGAARIGEILRGLGLQPEASADGFTVRSPSFRFDIEIEADLIEEIARVHGYENIPDDRT 496 Query: 474 SEPLPLTQVEDKRNLSLQQSRTR-YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 S L + + + R R+R V R +A R EVV+++F++++ F + + Sbjct: 497 SGKLAMLALPETR-------RSRAAVYRKMAERGFQEVVSYAFVNEDWERDFAANESPVR 549 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NP++A S MR++L+ GL++ N++R + +FE++ ++ ++T GQ + Sbjct: 550 LQNPLAAQYSVMRSTLIGGLIEILQNNLNRKQSRVRVFEIARIFRDETAHGQPERIGALV 609 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 GS+ E G R D +D KAD S++ + + +R E A HPGR Sbjct: 610 YGSALPEQWG--------AAARAADFYDVKADVESLLAGKTA-EFVRMEHPA---LHPGR 657 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S I+ V G+ GE HP L + L FE+ + ++ +K R + +S Sbjct: 658 SAEIRVDGAAV-GFIGELHPQWLQKYDLPQAALVFELDMAAVLACEKVRYQA-----VSK 711 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 P +RDLAF++ + + L +K V LI ++ +FDV++G L E KS+A+++++ Sbjct: 712 FQPARRDLAFVLSEAVSYAELEGSLKTVRSPLIREIALFDVYRGAGLPENTKSMAVKIIL 771 Query: 772 QPLKDTFRDDDIRILMDRIV 791 Q +T D+ + ++ +++ Sbjct: 772 QSDSETLTDEAVEPIVAKLI 791 >gi|237808481|ref|YP_002892921.1| phenylalanyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] gi|237500742|gb|ACQ93335.1| phenylalanyl-tRNA synthetase, beta subunit [Tolumonas auensis DSM 9187] Length = 796 Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 437/819 (53%), Gaps = 40/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF +W+++ + T +S E++ +T GLEV+ +D + I +V+ ++PD D Sbjct: 1 MKFNKAWIEELVPTSLSAEELAAQITMAGLEVDGIDPVAGTFNGVVIGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGAPN R GL A G+ +P + ++ K+RG+ S GM+ Sbjct: 61 KLRVTKVNVGEAELLDIVCGAPNCRQGLRVAVATVGAVLP-GDFVIKKAKLRGLPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D + I+ELP DAP+G L +YL L+D I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSFSELGIGSDHSGIIELPADAPIGTDLREYLSLNDSCIEVDLTANRADCLGMLGLAREI 179 Query: 179 VAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 +LKE IN +++ P++++ D C + ++G+ P WM+ Sbjct: 180 AVLNRCELKEPEINAVNATLTDTYPIDVQATAD----CPRYLGRVLRGLNVKATTPLWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLRSI +VD+TNYV L+ G P H FD +++ + VRRA +GEK+ LD E Sbjct: 236 ERLRRCGLRSIDPIVDVTNYVLLELGQPMHAFDLAKLQGTIQVRRATAGEKLTLLDQTEV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D ++IA D ++AGI GG G D + TTD+++E A + P+++ + G+ T Sbjct: 296 SLRDDTLIIADDRGAIAMAGIFGGADTGVDAETTTDIMLECAFFQPLSVTGRARAYGLRT 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSEVK 412 DS +RFERGVD Q ++ +L+L +CGG+ + A + + + ++ Sbjct: 356 DSSHRFERGVDPQVQFKAMERATALLLDICGGSCGPVIDKTAADALPAVKTVSLRREKLT 415 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G+ + + IL RLG V + ++ +VPSWR D+ + DLVEEI RIYG D I Sbjct: 416 RLVGMAFDDAEVVDILTRLGLQVTATENGWQTNVPSWRFDIAIEEDLVEEIARIYGYDNI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKR---VLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P E +S + + +KR +L R E + +SF+ + L Sbjct: 476 -----PNIAPEAHLTMSEHKEAEQPLKRFRDLLVDRGFHEAITYSFVDPKVLSLLEPSAD 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QK 585 + + NPI++DMS MR SLLPGLL A N +R +FE + + + + G Q+ Sbjct: 531 PIVLPNPIASDMSAMRVSLLPGLLGAVVYNQNRQQTRVRLFESGLRFIRDANAENGIRQE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G++ E W+ S R VD FD K D +++E + D+ RF Sbjct: 591 AMLAGVITGNAADEN----WTIPS----RAVDFFDLKGDVEALLELTANADAYRFVRCEH 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I+ + + V GY G HP + GL + FEV L +I + Sbjct: 643 PALHPGQSAAIEFNGKSV-GYIGVVHPALEKKLGLKSKAIVFEVELAAI-----LQRNIP 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +VDQ I A ++ + + V I + +FD +QG + +GKKS Sbjct: 697 SFAEVSKFPGNRRDLAIVVDQTISADDILRLARKVGGNQIVGINLFDTYQGTGVPDGKKS 756 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A +++Q ++ T D +I M+R+VE + + NA LR Sbjct: 757 LAFSMILQNVERTLEDKEIAETMERVVEALRVEFNATLR 795 >gi|91792959|ref|YP_562610.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella denitrificans OS217] gi|91714961|gb|ABE54887.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella denitrificans OS217] Length = 795 Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust. Identities = 281/816 (34%), Positives = 438/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S +++ +T GLEV+ VD A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAISRDELSHQITMAGLEVDGVDPVAAAFSGVIIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLQVTKINVGSDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSMGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP DAP+G + ++L+L D IIDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSFTELGIDIESDGIIELPQDAPLGVSVREFLDLDDAIIDVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA---PN 232 G L +++ P S SI ++ LC + VK + NVA P+ Sbjct: 180 -----GVLNRQSVTAPSWEAVSASIDAPFSIEVKTPELCPRYLGRVVKNI--NVAAPTPS 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI A+VDITN+V ++ G P H FD + ++ +TVR A EK+ LD Sbjct: 233 WMQEKLRRSGIRSIDAIVDITNFVLIEFGQPMHAFDLNTLNGGITVRLADGVEKLKLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E + D +VIA D + ++AG+ GG+ G D T D+L+E A + P+ I + LG+ Sbjct: 293 NEITVPNDTLVIADDNQAVALAGVFGGEATGVSDTTQDILLECAFFSPLAIMGKSRRLGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSE 410 TD+ +RFERGVD + V+ L+L +CGG A + A + Y KP ++ S+ Sbjct: 353 HTDASHRFERGVDPELQHKVMDRATRLVLDICGGEAGQVIEAVSAEYLPKPAQLTLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + G +P D + ILERLGFSV D + V+ ++R D+ + DL+EE+ RIYG D Sbjct: 413 LDNTLGHHIPDTDVVEILERLGFSVSANGDTWRVTTATYRFDMAIEEDLIEEVARIYGYD 472 Query: 471 QIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I + P ++ D + + R V+ +L +R E V +SF+ + L G Sbjct: 473 NIPNIAPQAALKMSDHKEADIDLKR---VRSLLVARGFQEAVTYSFVDPKMQNLVHPGLE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMA 588 + + NPIS +MS MR S+ GLL A G N R +FE + D T E Sbjct: 530 AMVLPNPISIEMSAMRLSMFTGLLGAVGYNQSRQQGRVRLFETGLRFIPDATAEAGVRQQ 589 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 A I SG++ WS +S + VD FD K D ++I V+ F+ S Sbjct: 590 AMIGAVISGVQNDEH-WSMES----KTVDFFDLKGDLEAMIGLTVAASEFSFKGATHSAM 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+ I + V+GY G HP++ FGL+ FE+ LD++ S +T Sbjct: 645 HPGQCAEILRNNR-VIGYIGAIHPSLEKPFGLNGKTFVFELELDALLQSNLPLAQT---- 699 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +VD+ I A ++N+I+ V + + + +FDV+ GK + GKKS+AI Sbjct: 700 -VSKFPANRRDIAVVVDESIAASDVMNLIRKVGENQLVGLNLFDVYTGKGVELGKKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +Q T + DI +D +V + + NA+LR Sbjct: 759 ALTLQDTTRTLEEKDITETVDSVVSALKTEFNALLR 794 >gi|117923683|ref|YP_864300.1| phenylalanyl-tRNA synthetase subunit beta [Magnetococcus sp. MC-1] gi|117607439|gb|ABK42894.1| phenylalanyl-tRNA synthetase beta subunit [Magnetococcus sp. MC-1] Length = 796 Score = 427 bits (1097), Expect = e-117, Method: Compositional matrix adjust. Identities = 257/817 (31%), Positives = 448/817 (54%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFT WL++ ++T + E+I TLT GLEV+ ++ + L + + +V+ +PD D Sbjct: 1 MKFTEKWLREQINTQLDSEQISKTLTMAGLEVDAMERLGKGLDKVQVGFLEAVQPHPDAD 60 Query: 60 ---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 C +R+ + + +VCGA N + G A G+ +P N + + ++RG S G Sbjct: 61 RLTCCQVRVGETR---LNIVCGATNHKQGDKVAVARDGAELP-NGLKIKKGQLRGQPSEG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL +++ S I+ LP DAP G ++DY + +D ++ +TPNR DC+GVRGIA Sbjct: 117 MLCSLTELGMAESSEGIIILPSDAPEGATMADYFQRNDICFELGITPNRGDCLGVRGIAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 DL A L + + +++ ++P + ++ D C +A V+GV+ +P+W+R Sbjct: 177 DLAAVTGESLIPLQSAVQVAA-NVPT-VAVEIADGEGCPRYAGRVVEGVKVGPSPDWLRN 234 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL++VGLRSI+ +VDITNYV L+ P H FD ++++ + VRRA E++ LD E Sbjct: 235 RLESVGLRSINNIVDITNYVMLELNQPMHAFDLAQLAAPIVVRRANPDERLTTLDYVERQ 294 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +I R ++AG++GG ++G D TT + +E A ++P+ AR+G+ L ++TDS Sbjct: 295 LTEQMTLICDQQRPLAVAGVMGGLNSGVTDATTSIFLESAYFNPVRTARTGRRLNLVTDS 354 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-KPRKIVFMNSEVKRLS 415 R+RFERG D + L L+L LCGG A I + T+ + + F ++ L+ Sbjct: 355 RHRFERGTDPMAIELALDRATQLVLELCGGQAGAITLTDAGTWSRNPPVAFRHTRANALT 414 Query: 416 GIDVPIEDSLRILERLGFSVI---GEYDKFEVSV----PSWRQDVEEKADLVEEILRIYG 468 G+ + + R L+ +G + + E +V P+ R D+ + DLVEE++R++G Sbjct: 415 GMCLTQAEQARYLQAIGCVEVAKPAQSATVEGAVWYLPPTHRHDLLREEDLVEEVVRLFG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ +E LP V ++ S ++ + +++ L +E VN++F++ E F Sbjct: 475 YDKVPTE-LPSGAVATHQD-SPERQLAKRLRKALTGLGYLEAVNYAFVAPEVQARFDADL 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + NP+S + S MRTSL+ GL++A RN+ R +FE+ H+++ D +GQ Sbjct: 533 HPIMLTNPLSEEQSCMRTSLIAGLVEAVRRNLSRGNDGLRLFEMGHIFKLDA-QGQVQEE 591 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + +G G+ R+W R D FD K D +V+ + R+ G P++ Sbjct: 592 EHVSMVLAG-RGTPRIWHTPQ----RVWDFFDLKGDFQTVVSRLQGAEP-RYLPGGPAFL 645 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR I + G+ GE HP++ + G+ P+ E+ D++ + K+ Sbjct: 646 HPGRKAEIHLRGRVA-GWMGELHPSLREAMGIDQPVLMLELRSDAL-----TQVNKKEAA 699 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++S V RD AF+VD+ PA T++ ++V +L+ +V +FD++ G+ + + KKS+A Sbjct: 700 NVSRYPAVTRDFAFVVDRDTPAATILESARSVAKQLVREVELFDLYTGEHVPQDKKSIAF 759 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +++Q T + +I +M ++ + K+ NAVLR+ Sbjct: 760 GLVLQADDRTLDEGEINQVMAQVTAKLEKQFNAVLRA 796 >gi|34763288|ref|ZP_00144246.1| Phenylalanyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887036|gb|EAA24149.1| Phenylalanyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 798 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 274/816 (33%), Positives = 448/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDVGEEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGKEYREYMGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYSRKVKYPMIEMTETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + +VIA D + +IAG+IGG++ DD+T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NEELVIADDEKAIAIAGVIGGQNTQIDDDTKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLNVVMARAVSLIAEVAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E K N++ + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -MPIMSIESGKENINFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N E ++ Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKNLGAEKDGLAVENLK-- 593 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ S +HP Sbjct: 594 -IGIILSGREDKNLW-NQSKTDYNFYDL----KGYLEFLLERLNVTKYSLTRLKNSNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK +I+ G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GVSAEIKIGEDII-GVFGELHPNLINYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M+ I+E + K N +R Sbjct: 763 IVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|219870911|ref|YP_002475286.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] gi|219691115|gb|ACL32338.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus parasuis SH0165] Length = 795 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 449/821 (54%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ ++ E++CD +T +GLEV+ V+ + I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAITTEQLCDQITMLGLEVDAVEAVAGEFNGVVIGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAPVG + DYL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIKEDHSGIIELPADAPVGLDVRDYLKLNDRAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + ++ ++ P +++P ++ +L C + VK V +P W Sbjct: 180 -----GVVNQLAVNAP-EIQAVPATISDKVAIELQAPEACPRYLGRVVKNVNVKAQSPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ G+RSI +VDITN L+ G P H FDA++I+ + VR A GE+++ LD Sbjct: 234 LQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKINGAIQVRMAKEGEELVLLDGT 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L P+ ++IA ++AGI GG+ +G T DV++E A + P+ I + G+ Sbjct: 294 TAKLQPNTLLIADQNGPLAMAGIFGGEASGVSAETKDVVLEAAFFAPLAITGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +I A + + P +++V S++ Sbjct: 354 TDASHRFERGVDPELTRKAMERATALLLEICGGEAGEIVEAVSSAHLPTSKQVVLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + E IL RLG ++ + + V PSWR D+E + DLVEE+ RIYG + Sbjct: 414 DSLLGHHIETETVTDILARLGLNLSYADESWTVQSPSWRFDIEIEEDLVEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL Q++ L+ R V+ L EV+ +SF+ + L Q Sbjct: 474 IPNNAPLAHLQMKGFPEKLLEAIR---VRTALVDSDYQEVITYSFVDPKVQELLHPSQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + NPIS++MS MR SLL GLL+ N +R IFE + + + + G Q++ Sbjct: 531 LILPNPISSEMSAMRVSLLTGLLETVAYNQNRQQNRVRIFESGLRFIPDANAENGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + I G R W K+E VD FD K D V+ + + LRF + + Sbjct: 591 VLGAV------IVGDKRPAHWEHKAEN----VDFFDLKGDLERVLSLTNAGNRLRFVAKS 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPG+S I + + GY G HP ++ GLS FE+ + I+++ Sbjct: 641 YPAFHPGQSAAILLDDQEI-GYIGTIHPKVVQKLGLSGKPVAFELLWSA--IAERSVPNA 697 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD--RLIDDVTVFDVFQGKSLGEGK 762 K++ S KRD+A +VD ++PAG L+++ + +L+ V +FDV+QG +L EGK Sbjct: 698 KEI---SRFPANKRDIAVVVDSNVPAGDLLDVARQAGGAKLV-AVNLFDVYQGTNLPEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + IQ + T +++I ++ ++E + ++ NA LR Sbjct: 754 KSLAISLTIQDTEKTLEEEEINAVLQAVLETLAQRFNAYLR 794 >gi|253996950|ref|YP_003049014.1| phenylalanyl-tRNA synthetase subunit beta [Methylotenera mobilis JLW8] gi|253983629|gb|ACT48487.1| phenylalanyl-tRNA synthetase, beta subunit [Methylotenera mobilis JLW8] Length = 789 Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust. Identities = 274/816 (33%), Positives = 436/816 (53%), Gaps = 39/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ +WL+ +DTD+ + + LT GLEVE++ A S + K+LS E++PD D Sbjct: 1 MQFSENWLRSLVDTDLDSQALSHALTMAGLEVEEMQPVAAAFSKVVVAKILSAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA N R GL+ A G+ +P + + K+RG+ES GMM Sbjct: 61 RLQVCKVDVGLAEPLQIVCGAANARAGLMAPCAMVGAELP--GISIKQAKVRGVESFGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S ++ ++EL DA VG + +YL+L+D + + LTPNRSDC+ + GIA D Sbjct: 119 CSSKELGISAEATGLLELDNDAVVGQDIREYLDLNDHLFTLKLTPNRSDCLSLTGIARD- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWMRQR 237 VAA G N P+ +E + +++S +C + + GV P WM +R Sbjct: 178 VAAITGAPTRFNAIVPVVAEHANSK-NVQVNESVVCPRYCGRLITGVNTAATTPAWMVKR 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ GLRSIS +VDITNYV L+ G P H FDA+++ ++VR A +GE I L++Q +L Sbjct: 237 LERSGLRSISVVVDITNYVLLELGQPMHAFDAAKLHGDISVRFANAGESIALLNDQTIEL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D++VIA ++AG++GGK + DD TTD+ +E A + P IA + LG TDS Sbjct: 297 KADDLVIADSNGALALAGVMGGKPSSVDDATTDIFLESAFFTPAVIAGKARRLGFSTDSS 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD L++ +LI +LCGG + + + S + + GI Sbjct: 357 YRFERGVDFGNTRNALEYATALIKTLCGGQVGPVTEVMSALPARDAVKLRMSRLISVLGI 416 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + E ++L +LGF + F V PS+R D+ + DL+EE+ R++G D I + Sbjct: 417 SLTQEKVAQLLTQLGFEFSSAAEVFTVVPPSYRFDINIEEDLIEEVARLHGYDHIPA--- 473 Query: 478 PLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 L V L+ + R ++ L S EVV +SF+ + G +++ N Sbjct: 474 -LAPVASLNMLAAPEQRLHLNQLRDSLVSVGYQEVVTYSFVDESWERDLIGNPAPIKLKN 532 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM-AAGIRKG 594 PI++++S MRTSL GLL N++R +FE+ VY+ Q+ +G+ G Sbjct: 533 PIASNLSVMRTSLWGGLLDVLTYNLNRKQERAYLFEIGAVYQQQAGAYQETTRVSGLAYG 592 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 S+ E W+ + E +D FD KA S+I + +E HPG+S Sbjct: 593 SAKPEQ----WAASNTE----IDFFDVKAHVDSLIGADGLHKQVTYEKAEHCALHPGQSA 644 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-----PISQKKRTKTKKVVH 709 + + + + G+ G+ HP + L+ FE+ +D+I P Q+ Sbjct: 645 KVMLNGKAI-GWLGKLHPKWQQHYDLAKSTYVFELDVDAIVARALPAYQE---------- 693 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S L PV+RDLA ++D+ + +++ IK + LI DV +FD++QGK + E KKS+A+ Sbjct: 694 VSKLLPVRRDLAIVLDETVAVQAVLSAIKAENIALIADVALFDLYQGKGVPENKKSLALS 753 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VL+ + T D D + +++ + K +AVLR+ Sbjct: 754 VLMHDTQKTLTDSDADTAIANLLQLLQIKFDAVLRN 789 >gi|325144068|gb|EGC66376.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M01-240013] Length = 787 Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust. Identities = 268/819 (32%), Positives = 453/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFER VD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERSVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ L + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLDLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F++++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGQFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ +++ ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLEGAANKLVQEISVFDVYRGTGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|304411360|ref|ZP_07392974.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|307305318|ref|ZP_07585066.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] gi|304350215|gb|EFM14619.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS183] gi|306911621|gb|EFN42046.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica BA175] Length = 795 Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust. Identities = 275/819 (33%), Positives = 443/819 (54%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ V+ A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G + DYL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L + + + + ++ ++ + C + VK V P WM+++ Sbjct: 180 --GVLNRQAVVEPQWQAVTATTDAQVTINVKAPAACPRYLGRVVKNVNVKAPTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E + Sbjct: 238 LRRSGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIQVRLGTGEEKITLLDGSEVTI 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ TDS Sbjct: 298 PSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRLS 415 +RFERGVD + V+ L+L +CGG A + A++ KP +IVF S++ R+ Sbjct: 358 HRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSEADLPKPAQIVFRRSKLDRIL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS- 474 G VP D + IL+RLGFSV+ D ++V+ ++R D+ + DL+EE+ RIYG + I + Sbjct: 418 GHHVPDTDVVEILQRLGFSVVVGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNI 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ ++ D + L R V+ +L +R E V +SF+ + L G + + Sbjct: 478 APVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGLDAMVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYMAAG 590 NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M A Sbjct: 535 NPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAMLAC 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E W+ +S + VD FD K D ++I VS F S HP Sbjct: 595 VITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRGATHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRTKTK 705 G+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 647 GQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHASLPLAQA------ 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + GKKS Sbjct: 700 ----VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q T + +I + +V + + NA LR Sbjct: 756 LAIALTLQDTTRTLEEKEIAETVGSVVSALKSEFNASLR 794 >gi|329118113|ref|ZP_08246825.1| phenylalanyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] gi|327465773|gb|EGF12046.1| phenylalanyl-tRNA synthetase beta subunit [Neisseria bacilliformis ATCC BAA-1200] Length = 787 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 265/810 (32%), Positives = 438/810 (54%), Gaps = 54/810 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK + ++S +++ LT GLEVE+ + A S + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQANPNLSADELSHLLTMSGLEVEESEPAAPAFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNVR G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVRPGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L DD + LP DAPVGG + DYL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSAKELGLPDDGVDGLHILPGDAPVGGNIRDYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A + I +S ++ P+ I D + C F ++ V A P WM Sbjct: 180 VAALTGCEFASTKIQAAPIVSGKTQPVRI----DAPADCGRFISRVIENVNAQAATPAWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 RQRL+ G+RSISALVDI NYV L+ G P HVFDA +IS + VRRA +GE + L+ + Sbjct: 236 RQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKISGSIIVRRAENGEVLACLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + SIAG++GG + D T ++++E A + P IA + G + Sbjct: 296 VTLADNTLVIADEKGALSIAGMMGGAASAVSDGTCNIVLEAAWFAPAVIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A +++ + V ++ Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGQAGEMVEAVGDLLPEKRVGVRLNRVAKV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+ + IL LG D F+ + P +R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIAADQVETILRTLGLQPEKTADGFQTTSPGFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 475 E---------PLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 E PLP T+ R R+ V +A+R EVV+++F+ + F Sbjct: 476 EATSGSLKMLPLPETR------------RPRFAVYNEMAARGYREVVSYAFVDEAWECDF 523 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG- 583 + + NP++A + MR++L+ GL++ N++R IFE++ V+ + G Sbjct: 524 AANDNSIRLQNPLAAQYAVMRSTLIGGLVEVLQNNLNRKQNRVRIFEIARVFAKNADGGF 583 Query: 584 -QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q G+ G++ E G E+ R D +D KAD +E + ++ F Sbjct: 584 AQNERIGGLWYGAAMPEQWG--------EKTRNADFYDIKAD----VENLLKGRAVEFVK 631 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 A HPGR+ I + + +G+ GE HP L + L FE+ D + ++++T Sbjct: 632 TAHPALHPGRAAKIVSDGQ-AIGFVGELHPKWLQKYDLPQAPLVFEI--DMAAVCRREKT 688 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEG 761 + + V S V+RDLAF++ +++ L +K V+ L+ ++ +FDV++G L E Sbjct: 689 RYQAV---SKFQSVRRDLAFVLPENVSYAELEGSLKAVNSPLVREIALFDVYRGAGLPEN 745 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 KS+A+++++Q +++T D+ + ++ ++V Sbjct: 746 SKSMAVKIILQDMENTLTDEAVEPVVQQLV 775 >gi|325206429|gb|ADZ01882.1| phenylalanyl-tRNA synthetase, beta subunit [Neisseria meningitidis M04-240196] Length = 787 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 268/819 (32%), Positives = 453/819 (55%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + + +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFER VD + ++ L+L +CGG A ++ A+ + +++ +K + Sbjct: 356 DSSFRFERSVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEAKQVGLRLDRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+D+P E IL+ L + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLDLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPD 475 Query: 473 --KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S L + ++ + R R R+ V +A+R EVV+++F++++ F Sbjct: 476 DYTSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANAD 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYM 587 + + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 529 PIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGQFVQNER 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 589 IGGLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGHPA 636 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 637 -LHPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-- 692 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S PV+RDLAF++ + + L+ +++ ++L+ +++VFDV++G L EG KSV Sbjct: 693 ---VSKFQPVRRDLAFVMPEAMSHDDLLLVLEGAANKLVQEISVFDVYRGMGLPEGMKSV 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A++V++Q +++T D+ + L+ +++ A LRS Sbjct: 750 AVKVILQDMENTLTDEAVEPLIGKLI-GAATAAGARLRS 787 >gi|294784377|ref|ZP_06749668.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] gi|294487949|gb|EFG35304.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_27] Length = 798 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 275/816 (33%), Positives = 447/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDVGEEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGKEYREYMGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNIKVKYPMIEMTETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEEITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ DD+T +V VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NKELVIADDEKAMAIAGVIGGQNTQIDDDTKNVFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLNVVMARAVSLIAEIAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E K N++ + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -MPIMSIESGKENINFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N E ++ Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKNLGAEKDGLAVENLK-- 593 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ S +HP Sbjct: 594 -IGIILSGREEKNLW-NQSKADYNFYDL----KGYLEFLLERLNVTKYSLTRLKNSNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GVSAEIKI-GEDVIGVFGELHPNLINYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M+ I+E + K N +R Sbjct: 763 IVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|119476517|ref|ZP_01616868.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2143] gi|119450381|gb|EAW31616.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2143] Length = 796 Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust. Identities = 278/830 (33%), Positives = 445/830 (53%), Gaps = 61/830 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + +WL++ ++ VS+E + + +T GLEV+ V+ + + +++++E++PD D Sbjct: 1 MKISENWLQEWVNPGVSIEDLVEKITMAGLEVDGVEAVAGEFTGVVVGEIIAIEQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + G + +QVVCGAPN R G+ +A G+ +P ++ + K+RG+ES G Sbjct: 61 KLRVCQVAGGDEIVQVVCGAPNARTGIKIPFATVGAVLPGDSPKGFKIKKAKLRGVESFG 120 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C+E+EL LSD + +MEL DAPVG L DYL+L D +I+V LTPNR+DC+ V GIA Sbjct: 121 MLCAEQELGLSDANEGLMELAGDAPVGINLRDYLDLDDTVIEVDLTPNRADCLSVAGIAR 180 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVR-NNVAPN 232 D+ G + E ++ PL + P + D++ + C + ++GV +P Sbjct: 181 DV-----GVIYECDVVAPLIAPVKPQIDDRLAIDIEAGADCPRYVGRIIRGVDVGQPSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI A+VD+TNYV L+ G P H FD + + VR A EK+ LD Sbjct: 236 WMQEKLRRSGIRSIDAVVDVTNYVLLELGQPMHAFDLRSLEGGIRVRHAQESEKMTLLDG 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L +VIA R ++AGI+GG+ + D+ +E A + P+ +A + G+ Sbjct: 296 QELELQAGTLVIADHQRPVALAGIMGGEATAVKPTSQDIFLEAAFFAPVKLAGRARAYGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--------TASDICIARNITYKPRKI 404 TDS +RFERGVD Q +P ++ L+L + GG +SDI IA I + +I Sbjct: 356 HTDSSHRFERGVDYQLQVPAIERATQLLLDIVGGQPGPIIELVSSDIPIAAEIELRAARI 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 K+L G+D+ + IL RLG +V + V PSWR D+ +ADL+EEI Sbjct: 416 -------KKLLGLDIERNEVTGILTRLGLTVTTTDQGWIVVAPSWRFDIAIEADLLEEIA 468 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQ---QSRT--RYVKRVLASRAMMEVVNWSFISKE 519 RIYG ++ LP+T++ +L+LQ +++T R ++R L +R E + + FI + Sbjct: 469 RIYGYNR-----LPVTRIHS--DLALQAKTETKTGLRAIRRQLVARGYQEAITYCFIEPK 521 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYE 577 L + + NPIS+DM+ MRTSL PGLL N++R + +FE + + Sbjct: 522 AQQLVCPQDDTVALTNPISSDMAVMRTSLWPGLLGVMEHNLNRQQSRIRLFESGLRFIPN 581 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV--IEPFVSL 635 D Q M AG G E WS+ E VD +D K D SV + + Sbjct: 582 GDDLPKQDAMLAGAITGRREPES----WSENGE----LVDFYDLKGDLESVLALSGLGNN 633 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 L F +G HPG++ I + V GY G HP + G + PI FEV L +I Sbjct: 634 TDLVFLAGEHPALHPGQTAAICYQGKTV-GYVGTIHPLLQKKMGFAQPIYLFEVELSAI- 691 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVF 753 + K LS V+RDLA ++++ I A +++N ++ V D L ++ +FD++ Sbjct: 692 ----TSAELPKFTELSKFPEVRRDLAILLERGIEANSVLNAVREVAGDEL-RNLRLFDIY 746 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GK + +KS+A+ + Q T +D++ ++R+V + ++ A LR Sbjct: 747 EGKGIDLKEKSLALGLTYQHSSRTLNEDEVNASVERVVSQLQQRFGATLR 796 >gi|237741016|ref|ZP_04571497.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] gi|229431060|gb|EEO41272.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 4_1_13] Length = 798 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 275/816 (33%), Positives = 447/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDVGEEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGKEYREYMGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPMIEMTETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEEITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ DD+T +V VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NKELVIADDEKAIAIAGVIGGQNTQIDDDTKNVFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLNVVMARAVSLIAEIAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E K N++ + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -MPIMSIESGKENINFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N E ++ Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKNLGAEKDGLAVENLK-- 593 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ S +HP Sbjct: 594 -IGIILSGREEKNLW-NQSKSDYNFYDL----KGYLEFLLERLNVTKYSLTRLKNSNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GVSAEIKI-GEDVIGVFGELHPNLINYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M+ I+E + K N +R Sbjct: 763 IVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|291280000|ref|YP_003496835.1| phenylalanyl-tRNA synthetase subunit beta [Deferribacter desulfuricans SSM1] gi|290754702|dbj|BAI81079.1| phenylalanyl-tRNA synthetase, beta subunit [Deferribacter desulfuricans SSM1] Length = 794 Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust. Identities = 272/827 (32%), Positives = 444/827 (53%), Gaps = 57/827 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MK + SWL D +D + + D LT GLEVE++ +E + KVL E++PD D Sbjct: 1 MKVSYSWLSDFIDVKGIDPRDLVDKLTMAGLEVEELIVKEKVENVVFAKVLEKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++ G + QV+CGA NV G + +A G+ +P + + KIRG+ES GM+ Sbjct: 61 KLSICKVFDG-GETYQVICGAANVAAGQIIPFAKIGAKLP-IGLKIKKAKIRGVESFGMI 118 Query: 119 CSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L + S IM L +D + +G +S YL L D I+D+S+TPNR+DC+ + GIA + Sbjct: 119 CSAAELGLEEKSDGIMVLDVDESYLGKNVSSYLGLEDVILDISITPNRADCLSIIGIARE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A LKE + L E+ P E K ++D C + +K V +P WM+ Sbjct: 179 IAALYGLSLKEKHFD--LKEENEPAENLKKVIVEDKDKCPIYLGRVIKDVEIKPSPIWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 RL++VG+R I+ +VDITNYV + G P H FD +++ + +R A GEKI+ LD +E Sbjct: 237 NRLRSVGVRPINNVVDITNYVLFEYGQPLHTFDMNKLEGNVIIRTAKPGEKIMTLDGKER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L +VIA + + ++AG++GG+ +G DDNT DV +E A + P +I + + LG+ TD Sbjct: 297 ELKDYMLVIADEKKAIAVAGVMGGEFSGIDDNTKDVFLECAYFKPESIRITARRLGMQTD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRL 414 S YRFERG+D + ++ + L+ G I KP+ + F V RL Sbjct: 357 SSYRFERGIDKGNVFKMVDYAAYLLQEYANGKVLKGIVTDEYEKVKPKSVSFNLDRVNRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++ E+S IL +L F ++ E F+V VP++R D+E D+ EE+ RIYG ++I Sbjct: 417 LGTELSKEESKDILTKLNFKIVEEQGGDFKVEVPTYRVDIERWVDIAEELSRIYGYNKID 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + + ++ +LSL+ R ++ L S E +N+SF+S E F G + + + Sbjct: 477 TTVPEINADSNQPSLSLKTQRE--IRYSLKSLGFYEAINFSFMSDEFLSNFDGKENFVYL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAA 589 NP+S DM+ +RT + PGL+ N+ + A FE ++V+ E + P + +++ Sbjct: 535 KNPLSEDMNTLRTFVFPGLIANMVSNIRQQYASLRFFEFANVFINKGEKELPLQKMHLSI 594 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL----------- 638 GI + + W++K++ IEPF L + Sbjct: 595 GITENFWPLS-----WAEKND------------------IEPFYYLKGVIDDILGSYKLK 631 Query: 639 -RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-IPI 696 ++ + HPG+S +K ++V G+ GE HP+IL+ L + E++ D + I Sbjct: 632 ADYKRADKEFLHPGKSAYLKIDNKVV-GFMGELHPDILEKLDLDKKLYVAELFFDDLVEI 690 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGK 756 + ++ K +K S V +D++ IVD+ ++N IKN+ +LIDDV ++D+++GK Sbjct: 691 IENRKIKYEK---FSQFPFVTKDISVIVDKGTLVNDMINEIKNISKLIDDVVLYDIYEGK 747 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++GE K S+ +V L+ T DD+ L+D I+E + K +A LR Sbjct: 748 NIGENKVSLTFRVYFSSLERTLTDDETNKLLDEIIELLKDKFDASLR 794 >gi|153000426|ref|YP_001366107.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella baltica OS185] gi|217973585|ref|YP_002358336.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella baltica OS223] gi|151365044|gb|ABS08044.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS185] gi|217498720|gb|ACK46913.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS223] Length = 795 Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust. Identities = 276/822 (33%), Positives = 442/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ V+ A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G + DYL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + P P ++ ++ + C + VK V P WM Sbjct: 180 -----GVLNRQAVVEPQWQAVTPTTDAQVTINVKAPAACPRYLGRVVKNVNVKAPTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIQVRLGTGEEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +IV S++ Sbjct: 355 DSSHRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSDADLPKPAQIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G VP D + IL+RLGF+V+ D ++V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHVPDTDVVEILQRLGFNVVAGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G + Sbjct: 475 PNIAPVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGLEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G E W+ +S + VD FD K D ++I VS F S Sbjct: 592 LACVITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRGATHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRT 702 HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + G Sbjct: 700 -------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I + +V + + NA LR Sbjct: 753 KKSLAIALTLQDTTRTLEEKEIAETVGSVVSALKSEFNASLR 794 >gi|85711631|ref|ZP_01042688.1| phenylalanyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] gi|85694491|gb|EAQ32432.1| phenylalanyl-tRNA synthetase beta subunit [Idiomarina baltica OS145] Length = 794 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 281/818 (34%), Positives = 440/818 (53%), Gaps = 40/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ ++ D+S E + + L+ GLEV+ ++ A + KV+ +PD D Sbjct: 1 MKFSENWLRSWVNPDISSEALSEQLSMAGLEVDGLEPVAADFHTVVVGKVVECGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+++ + +VCGAPN R L+ V A G+ +P + + K+RG S GM+ Sbjct: 61 KLQVTKVDVGENELLDIVCGAPNCRKDLMVVVAKVGAVLP-GDFKIKKAKLRGHPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L DD I+ELP DAP+G +YL L D ID+ LTPNR DC+ +RGIA ++ Sbjct: 120 CSFKELGLIDDHDGIIELPSDAPIGKDYREYLGLDDLSIDIDLTPNRGDCLSIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPL--SSESIPLEIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G L I++S P + E+ + K LD C + VK V P WM Sbjct: 180 -----GVLNNIDVSEPTVDAVEATLEDAKAIHLDAPVGCPRYLGRVVKNVDVKQQTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VDITNYV L+ G+P H FD RI + VR A GE + LD QE Sbjct: 235 SEKLRRSGIRSIDPVVDITNYVLLELGHPMHAFDLDRIQGDVHVRYANKGETLTLLDEQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA D + ++AG+ GG +G + D+ +E A + P I + G+ T Sbjct: 295 VKLDDDVLVIADDKQALAMAGVYGGLGSGVTRESKDIFLESAFFAPDAILGKARRFGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 D+ +R+ERGVD + ++ L++ +CGG A I A++ + KP ++ + + Sbjct: 355 DASHRYERGVDPELQRQAMERATQLLIEICGGEAGPIVEAKSDEHLPKPAEVTLRAARLT 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + GID+ ILERLGF V E ++ V VP++R D+ + DL+EE+ R++G + Sbjct: 415 SVLGIDIEAARVTEILERLGFDVKVETGEWLVKVPTYRFDIAIEEDLIEEVARVFGYNNF 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQREL 531 ++ P Q+ + S R V ++ R E + +SF+ K Q+ LF L Sbjct: 475 QAAA-PAAQLRMRPQQESLISTHRLVDAMI-ERGYQEAITYSFVDPKHQAALFDESA-SL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + +PIS DMS+MR SL PGLL A N R + A E + D Q+ M Sbjct: 532 TLPHPISVDMSSMRLSLWPGLLNALAHNQKRQQSVLAFVETGLRFIPDEAAENGVVQQPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 +G+R G + G WS + R VD +D K D ++++ ++ +RF + S Sbjct: 592 FSGVRSGKA----YGEHWSAED----RGVDFYDVKGDVEALLKK-TGINDVRFVASEHSA 642 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E +GY G HP FGL+ FE+ LD+ I+Q+ + V Sbjct: 643 LHPGQSAAI-YRGERCIGYMGALHPKFEKTFGLNQRAFVFELQLDA--INQRSIPSAQPV 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSV 765 S ++RDLA ++D+ I AG ++ +KN V++LI D+ +FDV+QG +L EGK+S+ Sbjct: 700 SRFPS---IRRDLAVVLDERIAAGEVLTTLKNIGVNQLI-DLNLFDVYQGDNLPEGKRSL 755 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ V +Q + T + +I +M+++V + + +A LR Sbjct: 756 ALSVTLQDNEKTLEETEINGIMEKLVSTLQSEFDATLR 793 >gi|114047663|ref|YP_738213.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella sp. MR-7] gi|113889105|gb|ABI43156.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella sp. MR-7] Length = 795 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 271/824 (32%), Positives = 447/824 (54%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFNGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + DS I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P + +I ++ ++ +++ C + VK V A P WM Sbjct: 180 -----GVLNRAAVTEPQWQAVTPTIDAKVAINVKETAACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKVTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D+T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDSTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G VP D + ILERLGF V+ ++V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNVAPVASLRMSDHKETDLSLKR---VRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR S+ GLL A G N R +FE + D +G+ Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDI-----NAESGV 586 Query: 592 RKGS------SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 R+ + +G++ W+ +S + VD FD K D ++I VS F Sbjct: 587 RQQAMLGCVITGLQNDEH-WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKK 700 S HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 642 SALHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA- 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + Sbjct: 700 ---------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVE 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + +Q T + +I +D +V + + NA LR Sbjct: 751 PGKKSLAIALTLQDTTRTLEEKEIAETVDSVVSALKTEFNASLR 794 >gi|302878343|ref|YP_003846907.1| phenylalanyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] gi|302581132|gb|ADL55143.1| phenylalanyl-tRNA synthetase, beta subunit [Gallionella capsiferriformans ES-2] Length = 783 Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust. Identities = 276/813 (33%), Positives = 444/813 (54%), Gaps = 41/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERNP 56 MKF+ +WL+ ++ ++ E++ LT GLEVE+ R A++P + +VLSVE++P Sbjct: 1 MKFSENWLRSWVNPKLTSEELGHLLTMAGLEVEE---RAAVAPAFNNVVVAQVLSVEKHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D D + +++ G+ + +VCGA NV VGL A G+ +P + + K+RGI S Sbjct: 58 DADRLNVCQVNVGEEAPLTIVCGAANVAVGLKVPCARIGAVLP-GDFKIKQAKVRGIPSF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L+ +S + LP DA VG + +YL+L D + + LTPNRSDC G++GIA Sbjct: 117 GMLCSAVELGLATESDGLWVLPSDAHVGQLMREYLDLDDQLFTLKLTPNRSDCSGMKGIA 176 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 ++ A +L + I S ++ ++ ++D + C + VKGV V P WM Sbjct: 177 REVAALTGSELSPVAIVA--QSVALSDQLVVTVEDKTSCPLYCGRLVKGVNAAAVTPVWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RL+ GLR I+A+VDITNYV ++ G P H FDA+ +S +TVRRA E + L++Q Sbjct: 235 QRRLERSGLRCINAVVDITNYVMMELGQPMHAFDAATLSGGITVRRAGKDEALTLLNDQA 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA D R+ ++AGI+GG +G + +T DV +E A + P IA + G+ T Sbjct: 295 VVLDENVLVIADDARVLALAGIMGGAGSGVETSTQDVFLEAAFFHPDAIAGRARRFGLAT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERG+D L+ L L +CGG+ ++I R IV S V R+ Sbjct: 355 DSSFRFERGIDFSATREALERATQLQLEICGGSIAEITEVRGELPARAAIVLRTSRVARV 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK- 473 GI ++L RL F + D F V+ PS+R D+ ++DL+EE+ R+YG D I Sbjct: 415 LGISFECSQIAQLLTRLQFEFVMSGDSFSVTPPSFRFDLSIESDLIEEVARLYGYDAIPA 474 Query: 474 -SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + LT + D LQ+ +R +++VL +R E+V+++F+ + G + Sbjct: 475 LAPHAALTMLPDSE---LQRPLSR-IQQVLVARDYQEIVSYAFVDAQTESELCGNDHPVA 530 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGI 591 + NPI+++MS MR+SL+ GL+ N++R + +FEV + ++D Q +GI Sbjct: 531 LKNPIASNMSVMRSSLIGGLVGVLRFNLNRRQSRVRLFEVGACFAKSDGQYVQTQRLSGI 590 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G+ E W + + VD +D KAD ++ P +LRF + HPG Sbjct: 591 AYGACLPEQ----WGSAT----KAVDFYDVKADIEALFAPL----TLRFAAAMHPALHPG 638 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 RS I + E ++G+ GE HP ++ FEV L ++ +++ ++ +S Sbjct: 639 RSAQI-FAGENLVGWLGELHPKWQR--DMTQAAVWFEVELQAL-----MQSRVPRMSEIS 690 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 PV+RDLA +VD+ + A TL + ++ + +V +FDV++G + GKKS+A +V Sbjct: 691 KFLPVRRDLAVLVDESVSAQTLTDAMLAAKADYVQEVVLFDVYRGPGVETGKKSLAFRVS 750 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +Q + T D +I M +VE + K A LR Sbjct: 751 LQDTQKTLTDAEIEPGMGLLVE-ALNKLGAQLR 782 >gi|160875023|ref|YP_001554339.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella baltica OS195] gi|160860545|gb|ABX49079.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS195] gi|315267255|gb|ADT94108.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella baltica OS678] Length = 795 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 276/822 (33%), Positives = 443/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ V+ A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G + DYL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + P P ++ +++ + C + VK V P WM Sbjct: 180 -----GVLNRQTVVEPQWQAVTPTTDAQVTINVNAPAACPRYLGRVVKNVNVKAPTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIQVRLGTGEEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFSPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +IV S++ Sbjct: 355 DSSHRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSEADLPKPAQIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G VP D + IL+RLGFS++ D ++V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHVPDTDVVEILQRLGFSLVVGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G + Sbjct: 475 PNIAPVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGLDAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G E W+ +S + VD FD K D ++I VS F S Sbjct: 592 LACVITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRGAMHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRT 702 HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + G Sbjct: 700 -------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I + +V + + NA LR Sbjct: 753 KKSLAIALTLQDTTRTLEEKEIAETVGSVVSALKSEFNASLR 794 >gi|167854636|ref|ZP_02477416.1| phenylalanyl-tRNA synthetase beta chain [Haemophilus parasuis 29755] gi|167854173|gb|EDS25407.1| phenylalanyl-tRNA synthetase beta chain [Haemophilus parasuis 29755] Length = 795 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 270/821 (32%), Positives = 447/821 (54%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ ++ E++CD +T +GLEV+ V+ + I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAITTEQLCDQITMLGLEVDAVEAVAGEFNGVVIGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAPVG + DYL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIKEDHSGIIELPADAPVGLDVRDYLKLNDRAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + ++ ++ P +++P ++ +L C + VK V +P W Sbjct: 180 -----GVVNQLAVNAP-EIQAVPATIADKVTIELQAPEACPRYLGRVVKNVNVKAQSPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ G+RSI +VDITN L+ G P H FDA++I+ + VR A GE+++ LD Sbjct: 234 LQEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKINGAIQVRMAKEGEELVLLDGT 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L P+ ++IA ++AGI GG+ +G T DV++E A + P+ I + G+ Sbjct: 294 TAKLQPNTLLIADQNGPLAMAGIFGGEASGVSAETKDVVLEAAFFAPLAITGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +I A + + P +++V S++ Sbjct: 354 TDASHRFERGVDPELTRKAMERATTLLLEICGGEAGEIVEAVSSAHLPTSKQVVLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + E IL RLG + + + V PSWR D+E + DLVEE+ RIYG + Sbjct: 414 DSLLGHHIETETVTDILARLGLNPSYADESWTVQSPSWRFDIEIEEDLVEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL Q++ L+ R V+ L EV+ +SF+ + L Q Sbjct: 474 IPNNAPLAHLQMKGFPEKILEAIR---VRTALVDSDYQEVITYSFVDPKVQELLHPSQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + NPIS++MS MR SLL GLL+ N +R IFE + + + + G Q++ Sbjct: 531 LILPNPISSEMSAMRVSLLTGLLETVAYNQNRQQNRVRIFESGLRFIPDANAENGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + I G R W K+E VD FD K D V+ + + LRF + + Sbjct: 591 VLGAV------IVGDKRPAHWEHKAEN----VDFFDLKGDLERVLSLTNAGNRLRFVAKS 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPG+S I + + GY G HP ++ GLS FE+ + I+++ Sbjct: 641 YPAFHPGQSAAILLDDQEI-GYIGTIHPKVVQKLGLSGKPVAFELLWSA--IAERSVPNA 697 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD--RLIDDVTVFDVFQGKSLGEGK 762 K++ S KRD+A +VD ++PAG L+++ + +L+ V +FDV+QG +L EGK Sbjct: 698 KEI---SRFPANKRDIAVVVDSNVPAGDLLDVARQAGGAKLV-AVNLFDVYQGTNLPEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + IQ + T +++I ++ ++E + ++ N LR Sbjct: 754 KSLAISLTIQDTEKTLEEEEINAVLQAVLETLAQRFNTYLR 794 >gi|319426544|gb|ADV54618.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella putrefaciens 200] Length = 795 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 275/822 (33%), Positives = 445/822 (54%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDGVDPVAADFNGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGTGELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDLREYLKLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L + P +P ++ ++ + C + VK V A P WM Sbjct: 180 -----GVLNRQAVVEPQWQAVMPTIDAKVTINVKAPTACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGTGEEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G VP D + IL+RLGFSV+ D ++V+ ++R D+ + DL+EE+ RIYG D I Sbjct: 415 RILGHHVPDTDVVEILQRLGFSVVASQDSWQVTTATYRFDMAIEEDLIEEVARIYGYDNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNTAPVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G E W+ +S + VD FD K D ++I VS F S Sbjct: 592 LACVITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRT 702 HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + G Sbjct: 700 -------VSKFPANRRDIAVVVDESVSAGDVMKVIRKVGENQLVGINLFDVYLGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I ++ +V + + NA LR Sbjct: 753 KKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|113970147|ref|YP_733940.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella sp. MR-4] gi|113884831|gb|ABI38883.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella sp. MR-4] Length = 795 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 270/824 (32%), Positives = 447/824 (54%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFNGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + DS I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P + +I ++ ++ +++ C + VK V A P WM Sbjct: 180 -----GVLNRAAVTEPQWQAVTPTIDAKVAINVKETAACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKVTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D+T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDSTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G VP D + ILERLGF V+ ++V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNVAPVASLRMSDHKETDLSLKR---VRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR S+ GLL A G N R +FE + D +G+ Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDI-----NAESGV 586 Query: 592 RKGS------SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 R+ + +G++ W+ +S + VD FD K D ++I VS F Sbjct: 587 RQQAMLGCVITGLQNDEH-WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKK 700 S HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 642 SALHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA- 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + Sbjct: 700 ---------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVE 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + +Q T + +I ++ +V + + NA LR Sbjct: 751 PGKKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|146292927|ref|YP_001183351.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella putrefaciens CN-32] gi|145564617|gb|ABP75552.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella putrefaciens CN-32] Length = 795 Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust. Identities = 275/822 (33%), Positives = 445/822 (54%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDGVDPVAADFNGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGTGELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDLREYLKLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L + P +P ++ ++ + C + VK V A P WM Sbjct: 180 -----GVLNRQAVVEPQWQAVMPTIDAKVTINVKAPTACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGDEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G VP D + IL+RLGFSV+ D ++V+ ++R D+ + DL+EE+ RIYG D I Sbjct: 415 RILGHHVPDTDVVEILQRLGFSVVASQDSWQVTTATYRFDMAIEEDLIEEVARIYGYDNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNTAPVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G E W+ +S + VD FD K D ++I VS F S Sbjct: 592 LACVITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRT 702 HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + G Sbjct: 700 -------VSKFPANRRDIAVVVDESVSAGDVMKVIRKVGENQLVGINLFDVYLGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I ++ +V + + NA LR Sbjct: 753 KKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|126174100|ref|YP_001050249.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella baltica OS155] gi|125997305|gb|ABN61380.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella baltica OS155] Length = 795 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 274/819 (33%), Positives = 441/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ V+ A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G + DYL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L + + + + ++ ++ C + VK V P WM+++ Sbjct: 180 --GVLNRQAVVEPQWQAVTATTDAQVTINVKAPDACPRYLGRVVKNVNVKAPTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E + Sbjct: 238 LRRSGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIQVRLGTGEEKITLLDGSEVTI 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ TDS Sbjct: 298 PSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRLS 415 +RFERGVD + V+ L+L +CGG A + A++ KP +IV S++ R+ Sbjct: 358 HRFERGVDPEMQHKVIDRATLLVLDICGGEAGPVVEAKSEADLPKPAQIVLRRSKLDRIL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS- 474 G VP D + IL+RLGFSV+ D ++V+ ++R D+ + DL+EE+ RIYG + I + Sbjct: 418 GHHVPDTDVVEILQRLGFSVVVGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNI 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ ++ D + L R V+ +L +R E V +SF+ + L G + + Sbjct: 478 APVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGLDAMVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYMAAG 590 NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M A Sbjct: 535 NPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAMLAC 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E W+ +S + VD FD K D ++I VS F S HP Sbjct: 595 VITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRGATHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRTKTK 705 G+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 647 GQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA------ 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + GKKS Sbjct: 700 ----VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q T + +I + +V + + NA LR Sbjct: 756 LAIALTLQDTTRTLEEKEIAETVGSVVSALKSEFNASLR 794 >gi|157375732|ref|YP_001474332.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella sediminis HAW-EB3] gi|157318106|gb|ABV37204.1| Phenylalanine--tRNA ligase [Shewanella sediminis HAW-EB3] Length = 795 Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust. Identities = 274/823 (33%), Positives = 446/823 (54%), Gaps = 49/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S E++ +T GLEV+ ++ S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSISREELSHQITMAGLEVDGIEGVAGEFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G+ + I +VCGAPN R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGEDELIDIVCGAPNCRLGIKVAVAMVGAVLP-GDFKIKKAKLRGEPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP+DAP+G L DYL L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDVESDGILELPVDAPIGADLRDYLSLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P S +I IK DL + C + VK V +P WM Sbjct: 180 -----GVLNRQSVTEPTWEAVSPTIDDAIKIDLQAPAFCARYLGRVVKNVNVKAESPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD ++++ + VR EK+ LD +E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAQLAGDIQVRMGSGDEKLTLLDGKE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VI+ R ++AG+ GG+++G + +T D+++E A + P+ I + LG+ T Sbjct: 295 ITVPADTLVISDQERPLALAGVFGGEYSGVNTDTQDIMLECAFFAPLAILGKARRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ + KP +IV S++ Sbjct: 355 DSSHRFERGVDPELQHKVMDRATRLVLDICGGEAGPVVEAKSEEHLPKPVEIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + + ILERLGF V D +EV+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHISDAEVTEILERLGFDVTVNSDTWEVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + + R V+ +L +R E V +SF+ + L G+ + Sbjct: 475 PNTAPVASLSMPDHKESDISLKR---VRSMLVARGFQEAVTYSFVDPKLQNLVHPGEEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS +MS MR S+ GLL A G N R +FE + DT Q+ M Sbjct: 532 ILPNPISVEMSAMRLSMFTGLLGAVGYNQSRQQNRVRLFETGLRFVPDTTAESSVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + G+ E WS +S + VD FD K D ++I VS F S Sbjct: 592 LGAVISGNQKDEH----WSMES----KTVDFFDLKGDLEAIIGLTVSDVEFTFRSATHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRT 702 HPG+ I + + V+G G HP++ FGL+ FE+ LD+ +P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGIIGAVHPSLEKPFGLNGKTIVFELELDALLHAGLPLAQT--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGE 760 +S +RD+A +VD ++ AG +V +I+ V ++L+ + +FDV+QGK + Sbjct: 700 -------VSKFPANRRDIAVVVDDNVSAGDVVKMIRKVGQNQLV-GLNLFDVYQGKGVEP 751 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + +Q T + +I ++D +V + + NA+LR Sbjct: 752 GKKSLAIALTLQDNTRTLEEKEIAEMVDSVVSALKSEFNALLR 794 >gi|34496808|ref|NP_901023.1| phenylalanyl-tRNA synthetase subunit beta [Chromobacterium violaceum ATCC 12472] gi|41018274|sp|Q7NYC1|SYFB_CHRVO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|34102663|gb|AAQ59028.1| phenylalanyl-tRNA synthetase beta chain [Chromobacterium violaceum ATCC 12472] Length = 785 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 278/809 (34%), Positives = 430/809 (53%), Gaps = 52/809 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ ++ ++ E++ D LT GLEVE+ V A S I +V ++ + D Sbjct: 1 MQFSEQWLRSWVNPALNTEQLSDLLTMAGLEVEETVAAAPAFSGVVIAEVKECVKHENAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + IQ+VCGAPNV VG+ A PG+ +P + K+RG+ES GM+ Sbjct: 61 RLRVTKVDAGTGELIQIVCGAPNVAVGVRVPCALPGAVLP-GEFKIKPTKMRGVESNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL + +D +M LP DAPVG + DYL L D + + +TPNR+D + +RGIA ++ Sbjct: 120 CSGKELGVPEDVDGLMLLPADAPVGQSIRDYLGLDDQLFTLKITPNRADSLSIRGIAREV 179 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN--WM 234 A +LK + I P + P++I + C + VKGV N AP WM Sbjct: 180 AALTGAELKPVAIEPVAPSIDDVRPVKI----ESRQACGRYLGRVVKGV-NAAAPTPAWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R+RL+ GLRSISA+VDITNY+ L++G P H FD ++I +TVR+A +GE +L L+ + Sbjct: 235 RRRLERSGLRSISAIVDITNYILLEQGQPMHAFDLAKIDGGITVRQARAGESLLCLNEKT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L P ++VIA D + ++ GI+GG+H+G + D+ +E A + P IA + LG + Sbjct: 295 VELQPKHLVIADDAKPLAMGGIMGGEHSGVTVASHDIFLESAFFAPEAIAGKARELGFGS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YR+ERGVD ++ L+L +CGG A + K + + + V ++ Sbjct: 355 DSSYRYERGVDFALQRDAIERATRLVLEICGGQAGPVVEEVAELPKRQAVQLRAARVAKV 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-- 472 G+ + E IL RL S + F V PS+R D+E + DL+EE+ R+YG + I Sbjct: 415 LGVAMSAERIGDILSRLSLSYTLADEVFTVQAPSFRFDIEIEEDLIEEVARVYGYNNIPA 474 Query: 473 ---KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 +S L Q EDKR + ++ +LA R EVV+++F+ + F G Sbjct: 475 DAPRSGMRMLAQPEDKRPVD-------QLRHLLAGRDYQEVVSYAFVDERWERDFAGNDN 527 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-----DTPEGQ 584 + + NPI++ MS MR++L+ GL+ N++R +FEV+ V+ D PE Sbjct: 528 PIRLQNPIASQMSVMRSTLIGGLVDVLAGNINRKQPRVRLFEVARVFLRGGNGFDQPEKV 587 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + G R W+ KSE VD FD KAD +++ P + + A Sbjct: 588 AGLVWGPRLAEQ--------WAAKSER----VDFFDVKADVEALLHPIKA----EYRKAA 631 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPGR ++ + V G GE HP + +GL N FE LD + R K Sbjct: 632 HPAFHPGRCAEVRVDGKAV-GVIGELHPQWVQAYGLINAPVLFE--LDLAAAIARGRIKA 688 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + V S PV+RDLA +VD+ + L++ ++ D+ +FDV++GK + EGKK Sbjct: 689 QPV---SKFQPVRRDLALLVDEAVTVAQLLSAFAAKRAEIVADIALFDVYRGKGVAEGKK 745 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 S+A VL+Q T D+D+ M ++E Sbjct: 746 SLAFSVLMQDNSRTLTDEDVEPAMQALLE 774 >gi|312961938|ref|ZP_07776435.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens WH6] gi|311283748|gb|EFQ62332.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens WH6] Length = 792 Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust. Identities = 279/821 (33%), Positives = 440/821 (53%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + V + + L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + + + +MELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSQAELQVGEGNDGLMELPGDAPVGQDIRVYLELEDASIEVDLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G L ++ P+ + S+P E++ ++ + C + ++ V + P W Sbjct: 179 -----GALYNAPVTRPVVA-SVPAVHDEVRSIEVLAPNACPRYLGRVIRNVDLSKPTPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Q Sbjct: 233 MVERLRRADVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L D +VIA R +IAG++GG+H+G T DV +E A +D I IA ++ G+ Sbjct: 293 EVALRADTLVIADHSRALAIAGVMGGEHSGVSATTRDVFLESAFFDQIAIAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +R+ERGVD + ++ L+L + GG A I N Y P I V Sbjct: 353 TDASHRYERGVDWKLAREAMERATGLLLEITGGEAGPITETVNEQYLPSVAPITLRAKSV 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +++ G+ + + ++L LG ++ +G ++ V VPS R D+ + DL+EE+ R+YG + Sbjct: 413 EQMLGLVIEPAEIEQLLSALGLAISVGGEGQWHVEVPSHRFDISLEVDLIEELARLYGYN 472 Query: 471 QI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ ++ P + E + +L ++R+L +R E V +SFI +Q LF Sbjct: 473 RLPVRYPQARLAPQPKAEARAHLP-------ELRRLLVARGYQEAVTYSFIDPKQFELFN 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG 583 G L + NPIS DM+ MR+SL PGL+KA N++R +FE + V + D + Sbjct: 526 PGVEPLLLANPISNDMAAMRSSLWPGLVKALSHNLNRQQDRVRMFESGLRFVGQLDGLK- 584 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W+ + VD FD KAD +V+ +LD+ F G Sbjct: 585 QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALDAFTFVPG 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPG++ I+ +V G+ G HP + GL P+ FE+ L + K Sbjct: 637 SHPALHPGQTARIEREGRLV-GFVGAIHPELSKTLGLDRPVFVFELVLAEV-----ASGK 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA I D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 MPKFSELSRFPEVRRDLALIADREVAATAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNTTTQNILTSLEQRLNATLR 791 >gi|332290334|ref|YP_004421186.1| phenylalanyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] gi|330433230|gb|AEC18289.1| phenylalanyl-tRNA synthetase subunit beta [Gallibacterium anatis UMN179] Length = 795 Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust. Identities = 269/814 (33%), Positives = 442/814 (54%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ +S E++CD +T +GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAISTEQLCDQITMLGLEVDGVEAVAGEFSHVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGSGELLDIVCGAPNCRKGLKVACAKVGAVLP-GDFKIKKAKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S D + I+ELP DAP+G L +YL L+D I++SLTPNR+DC+ +RGIA ++ Sbjct: 120 CSYAELAISTDGSGIIELPADAPIGMDLREYLNLNDKAIEISLTPNRADCLSIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 + E+ + P+ S +I ++ +L C + + V+ V A P WM+++ Sbjct: 180 AVVNKAAMNELQFT-PVKS-TISDKVAIELKAPEACPRYLLRMVRNVNVKAATPIWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNY+ L+ G P H FDA +++ + VR A +GEK++ LD +L Sbjct: 238 LRRCGIRSIDPVVDVTNYILLELGQPMHAFDADKVTQPIQVRMAKNGEKLVLLDGSTAEL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + ++IA ++AGI GG+ +G ++NT +V++E A + P+ I + G+ TD+ Sbjct: 298 KENTLLIADQNGPLAMAGIFGGEASGVNENTQNVILESAFFAPLAITGRARQYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +RFERGVD + ++ +L++ +CGG A +IC + P+ + ++ L Sbjct: 358 HRFERGVDFELQRYAMERATALLIEICGGEAGEICEVADENALPKLNPVTLHREKLDNLL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 G + E IL+RLGF V D + V SWR D+E + DL+EE+ RIYG + I + Sbjct: 418 GHHIETETVTDILQRLGFQVSYANDVWTVVPTSWRFDIEIEEDLIEEVARIYGYNTIPNN 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PL + + + + SR +K E V +SF+ + L Q L + Sbjct: 478 APLAHLMMREHKESDVSLSR---IKTAFVEHDYQEAVTYSFVDPKVQRLLHPEQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS +MS MR SLL GLL A N +R + +FE + V + D P G Q+++ G Sbjct: 535 NPISVEMSAMRVSLLSGLLGAVAYNQNRQQSRIRLFESGLRFVVDADHPIGVRQEFVIGG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ E W+ KSE VD FD K D S+ + + +++F + + HP Sbjct: 595 VISGNRHNEH----WAIKSEA----VDFFDLKGDLESIFDLSNAGKNIKFVAKSYPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I E + G+ G HP + L+ + FEV D IS K + K++ Sbjct: 647 GQSAAIMLGDEEI-GFIGTIHPRVAQKLDLNGKVVVFEVLWDK--ISHKDVIQAKEI--- 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RDLA IV +++ A ++ + + + + +FDV+QG + EG KS+AI + Sbjct: 701 SRFPANRRDLAIIVAENVTADEVLTVCREAAGAQLTQINLFDVYQGAGIAEGMKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q + T D++I ++D ++ + +K NA LR Sbjct: 761 ILQDNEKTLSDEEISAVVDTVLSALKEKLNAYLR 794 >gi|146307009|ref|YP_001187474.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas mendocina ymp] gi|145575210|gb|ABP84742.1| phenylalanyl-tRNA synthetase beta subunit [Pseudomonas mendocina ymp] Length = 792 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 272/817 (33%), Positives = 431/817 (52%), Gaps = 40/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ DVS +++ L+ +GLEV+ V A S + ++LS E++PD D Sbjct: 1 MKFSEQWLRSWVNPDVSRDELVARLSMVGLEVDAVIPVAGAFSGVVVGEILSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ESFQVVCGAPNARAGIKIPFAMIGAELP-GDFKIKKAKLRGVESQGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD++ +MEL DAPVG + YL L D I++ LTPNR DC+ + G+A ++ Sbjct: 119 CSASELQISDDNSGLMELAADAPVGQDIRAYLGLDDASIEIGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A + ++++ + E P+E+ L + + K + P WM + Sbjct: 179 GAIYGSPVLAVSVAPVAAIHDEVRPVEV---LAPKACPRYLGRVIRKVDLSRPTPLWMVE 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ +RSI A VD+TNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 236 RLRRSDIRSIDAAVDVTNYVMLELGQPMHAFDLAEINGGVRVRMAEEGEKLVLLDGQEVS 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA R +IAG++GG+H+G D T D+ +E A +D I +A ++ G+ TDS Sbjct: 296 LRADTLVIADHSRALAIAGVMGGEHSGVSDKTRDLFLESAFFDNIAVAGKARSYGLHTDS 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRL 414 +RFERGVD Q ++ +L+L + GG A I + P I + ++ Sbjct: 356 SHRFERGVDSQLARSAMERATALLLEIVGGEAGPIIEVSSEADLPNVAPITLRAERISQM 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI- 472 +D+ + R+L LG VI + +++VSVPS R D+ + DL+EE+ R+YG +++ Sbjct: 416 LSMDMDGAEVERLLSALGLGVIAQGAGQWQVSVPSHRFDISLEVDLIEELGRLYGYNRLP 475 Query: 473 ----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++ P + E + L ++R+L +R E + +SFI + LF G Sbjct: 476 VRYPQARLAPQAKAEARAELP-------ALRRLLVARGYQEAITYSFIDPKLFELFSPGV 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYM 587 L++ NPISADM+ MR+SL PGL+KA NV+R + +FE + Q+ M Sbjct: 529 APLQLANPISADMAAMRSSLWPGLVKALQHNVNRQQSRVRLFESGLRFVGQLESLQQEAM 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ GS EG W++ E VD +D KAD +++ + D+ F G Sbjct: 589 LAGVISGSRLPEG----WANSRES----VDFYDLKADVEALLGYAGAADAFSFVPGEHPA 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ I+ +V G+ G HP + GL P+ FE+ L + + Sbjct: 641 LHPGQTARIEREGRLV-GFMGALHPELSKTLGLDQPVFLFELVLAEVAAG-----RMPVF 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLA +VD+ PA L I + + D+ +FDV+ GK + +KS+A Sbjct: 695 SELSRFPEVRRDLALLVDREQPAEAVLAAIRETAGEWLTDLKLFDVYHGKGIDPHRKSLA 754 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + Q T DD++ I+ + ++ NA LR Sbjct: 755 VGLTWQHPSRTLNDDEVSTTTQNILTCLEQRFNATLR 791 >gi|71908285|ref|YP_285872.1| phenylalanyl-tRNA synthetase beta subunit [Dechloromonas aromatica RCB] gi|91208237|sp|Q47CM9|SYFB_DECAR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71847906|gb|AAZ47402.1| phenylalanyl-tRNA synthetase beta subunit [Dechloromonas aromatica RCB] Length = 794 Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust. Identities = 278/825 (33%), Positives = 432/825 (52%), Gaps = 52/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ SWL+ +D +S E++ LT GLEVE++D A + VL V ++PD D Sbjct: 1 MKFSESWLRTLVDPKLSSEELSHLLTMAGLEVEELDPVAPAFDNVVVAHVLDVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG +VCGAPNV VGL A PG+ +P + + + K+RGIES+GM+ Sbjct: 61 RLNVCQVDTGSGAPTTIVCGAPNVAVGLKVPCALPGAKLP-GDFTIKIAKVRGIESSGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL ++++++ ++ LP DAPVG + YL+L D + ++ LTPNR+DC+ + GIA ++ Sbjct: 120 CSAKELGIAEEASGLLVLPSDAPVGQAIRQYLDLDDNLFELKLTPNRADCLSLLGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + S P+ E SI LD C + +KGV P WM Sbjct: 180 -----GAITGAATSLPVVPEVVASIADSRAVVLDAPEACPLYCGRVLKGVNAKAPTPEWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RL+ G+R+ISALVD+TNYV L+ G P H FD +R+ + R A EK+L L+ Q Sbjct: 235 KRRLERSGIRAISALVDVTNYVMLELGQPLHAFDNTRLEGAVHARLAKPEEKLLLLNEQT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D + ++AGI+GG+ +G T+++ +E A + P IA + G + Sbjct: 295 IAVDADVLVIADDVKPLAMAGIMGGEESGITLETSELFLESAFFAPKAIAGRARRYGFGS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+ +RFERGVD G ++ LIL +CGG A + A+ + + ++ + + + Sbjct: 355 DASHRFERGVDFGGARRAIERATQLILEICGGQAGPVVEAKAVLPVRKPVLLRTARAEMV 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ + E + L S + E D F+V+ PSWR D+E + DL+EEI R+YG D I S Sbjct: 415 LGLPLGAERIAGLFAGLDLSFVCEGDNFQVTPPSWRFDMEVEEDLIEEIARLYGYDNIPS 474 Query: 475 EPLPLTQVEDKRNLSLQ----QSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 V + L +Q R Y ++++LA R EVVN++F+ F Sbjct: 475 -------VSPRGALKMQVQPEARRPAYRLRQMLADRGYQEVVNFAFVEAAWEADFAENVA 527 Query: 530 ELEIL---NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE---- 582 E E++ NPI++ M+ MR++L GL+ N+ R +FEV + Sbjct: 528 EAELIRLANPIASQMAVMRSTLFGGLISNLITNLKRKQTRVRLFEVGRTFHRAADAVPVN 587 Query: 583 --GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 Q + AG+ G + EG G R VD +D K D +++ P V LRF Sbjct: 588 GFHQPWKLAGLAFGGALPEGWG--------SGARKVDFYDVKGDIEALLAPAV----LRF 635 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 E A HPGR+ I + G GE HP + + L FE+ D++ K Sbjct: 636 EKLAHPALHPGRAARILFDGRDI-GCIGEVHPEWVQKYDLPQAPVVFELDFDAV-----K 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 +S PV RDLA +VDQ++ TL++ +K V LI D+ +FDV+ GK + Sbjct: 690 AANVPAYAEVSKFPPVIRDLAIVVDQNVVLQTLLDGLKGQVSDLIQDIQLFDVYVGKGVP 749 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 E KKS+A ++++Q + T +D ++ M ++V + A LR+ Sbjct: 750 ENKKSLAFRIVMQDTQRTLQDSEVDAAMQQLVSCFEQAFGAQLRA 794 >gi|146282707|ref|YP_001172860.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas stutzeri A1501] gi|145570912|gb|ABP80018.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas stutzeri A1501] Length = 792 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 271/818 (33%), Positives = 442/818 (54%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS E++ L+ +GLEV+ V + + + +VL ++PD D Sbjct: 1 MKFSEQWLRSWVNPQVSREELVARLSMVGLEVDAVTPVAGSFNGVVVGEVLETAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGQ-ETFQVVCGAPNVRPGLKIPFAMIGAQLP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + D + +MEL DAPVG L +YL L D I++ LTPNR DC+ + G+A ++ Sbjct: 119 CSETELQVGGDDSGLMELAADAPVGTDLREYLGLDDVSIEIGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A +++ E+ ++ + P+E+ C + + V P WM Sbjct: 179 GAIYGAEVRPVEVGVASVAHEDVRPVEVL----APKACPRYLGRVIHNVDLTRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A+VD+TNYV L+ G P H FD + + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDAVVDVTNYVMLELGQPLHAFDLDEVKGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D ++IA R +IAG++GG+H+G +T + +E A +D I +A ++ G+ TD Sbjct: 295 SLRSDTLIIADHERPLAIAGVMGGEHSGVSASTRSIFLESAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ SL+L + GG A I A + P + + + Sbjct: 355 ASHRYERGVDSQLPRQAMERATSLLLDIVGGKAGPIVEAVSERDLPNIAPVTLRAERITQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+++ + +R+L LG V+GE + +++VSVPS R D+ + DL+EE+ R+YG D++ Sbjct: 415 MLGLELDGTEVVRLLTSLGLVVVGEGEGRWQVSVPSHRFDISLEVDLIEELGRLYGYDRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E + L L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPEAKPEARAELPL-------LRRLLVARGYQEAITYSFIDPKLFELFSPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 + LE+ NPISADM+ MR SL PGL+KA N++R + +FE + P Q+ Sbjct: 528 MKPLELANPISADMAAMRASLWPGLVKALQYNLNRQQSRVRLFEAGLRFVGQLPALEQEA 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ GS EG W++ E VD FD KAD +++ S + RF G Sbjct: 588 MLAGVVTGSREPEG----WANAREA----VDFFDVKADVEALLAFAGSGGAYRFVPGEHP 639 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I+ +V G+ G HP + G+ VYL + +S+ + + Sbjct: 640 ALHPGQTARIERDGRLV-GFVGSLHPELAGTLGIDQ-----SVYLFELKLSEIADGRMPQ 693 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LS V+RDLA +V++ + A ++++ I+ + D+ +FDV+QGK + KSV Sbjct: 694 FSELSRFPEVRRDLAVLVNRDVAAQSILDCIRGGAGENLTDLKLFDVYQGKGIDPLSKSV 753 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ + Q T DD++ +M +I+ ++ ++ NA LR Sbjct: 754 AVGLTWQHPSRTLNDDEVNDVMQKILTSLEERFNATLR 791 >gi|120598988|ref|YP_963562.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella sp. W3-18-1] gi|120559081|gb|ABM25008.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella sp. W3-18-1] Length = 795 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 273/819 (33%), Positives = 443/819 (54%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSREALSHQITMAGLEVDGVDPVAADFNGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGTGELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ +S I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGINVESDGIIELPLDAPLGTDLREYLKLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L + + + SI ++ ++ + C + VK V P WM+++ Sbjct: 180 --GVLNRQTVVEPQWQAVTPSIDAKVTINVKAPAACPRYLGRVVKNVNVKAPTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN+V ++ G P H FD +++ + VR EKI LD E + Sbjct: 238 LRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLVKLTGDIQVRLGNGDEKITLLDGSEVTI 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ TDS Sbjct: 298 PSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRLS 415 +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ R+ Sbjct: 358 HRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLDRIL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 G VP D + IL+RLGFSV+ D ++V+ ++R D+ + DL+EE+ RIYG D I + Sbjct: 418 GHHVPDTDVVEILQRLGFSVVASQDSWQVTTATYRFDMAIEEDLIEEVARIYGYDNIPNT 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + + Sbjct: 478 APVAALRMSDHKESDLSLKR---VRALLVARGFQEAVTYSFVDPKLQNLVHPGEQAMVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYMAAG 590 NPIS++MS MR S+ GLL A G N R + +FE V + + G Q+ M A Sbjct: 535 NPISSEMSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAMLAC 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E W+ +S + VD FD K D ++I VS F S HP Sbjct: 595 VITGLQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRTKTK 705 G+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 647 GQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA------ 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + GKKS Sbjct: 700 ----VSKFPANRRDIAVVVDESVSAGDVMKVIRKVGENQLVGINLFDVYLGKGVEPGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q T + +I ++ +V + + NA LR Sbjct: 756 LAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|229591574|ref|YP_002873693.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas fluorescens SBW25] gi|229363440|emb|CAY50635.1| phenylalanyl-tRNA synthetase beta chain [Pseudomonas fluorescens SBW25] Length = 792 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 278/821 (33%), Positives = 439/821 (53%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + V +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVDRDELVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + + + +MELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSQAELQVGEGNDGLMELPADAPVGQDIRVYLELEDASIEVDLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G L ++ P + ++P E++ D+ + C + ++ V + P W Sbjct: 179 -----GALYNAPVTRP-AVAAVPAVHDEVRPIDVLAPNACPRYLGRVIRNVDLSKPTPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Q Sbjct: 233 MVERLRRADVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L D +VIA R +IAG++GG+H+G + T DV +E A +D I IA ++ G+ Sbjct: 293 EVSLRADTLVIADHSRALAIAGVMGGEHSGVSETTRDVFLESAFFDQIAIAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +R+ERGVD + ++ L+L + GG A I + Y P I V Sbjct: 353 TDASHRYERGVDWKLAREAMERATGLLLEITGGEAGPITETVSEQYLPSVAPITLRAKSV 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +++ G+ + + ++L LG + G ++ V VPS R D+ + DL+EE+ R+YG + Sbjct: 413 EQMLGLVIAPAEIEQLLSALGLGISAGGEGQWTVEVPSHRFDISLEVDLIEELARLYGYN 472 Query: 471 QI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ ++ P + E + +L ++R+L +R E V +SFI +Q LF Sbjct: 473 RLPVRYPQARLAPQPKAEARAHLP-------ELRRLLVARGYQEAVTYSFIDPKQFELFS 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG 583 G L + NPIS DM+ MR+SL PGL+KA N++R +FE + V + D + Sbjct: 526 PGVEPLLLANPISNDMAAMRSSLWPGLVKALSHNLNRQQDRVRMFESGLRFVGQLDGLK- 584 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W+ + VD FD KAD +V+ +LD+ F G Sbjct: 585 QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALDAFTFVPG 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPG++ I+ +V G+ G HP + GL P+ FE+ L + K Sbjct: 637 SHPALHPGQTARIEREGRLV-GFVGAIHPELSKTLGLDRPVFVFELVLAEV-----ASGK 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA I D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 MPKFSELSRFPEVRRDLALIADREVAATAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNTTTQNILTSLEQRLNATLR 791 >gi|94499186|ref|ZP_01305724.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacter sp. RED65] gi|94428818|gb|EAT13790.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacter sp. RED65] Length = 796 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 280/825 (33%), Positives = 443/825 (53%), Gaps = 52/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ ++ +S +++ +T GLEV+ V+ S + +V+ E++PD D Sbjct: 1 MKFSENWLREWVNPKLSTDELVAQITMAGLEVDAVEPVAGEFSGVVVGEVVKKEQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIEST 115 L + + + QVVCGAPNVR GL +A G+ +P + K+RG+ES Sbjct: 61 KLALCVVSDGSETFQVVCGAPNVREGLKIPFAKIGALLPPGKDGKPFKIKKAKLRGVESQ 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C+E EL LSD +MELP DAPVG +YL L+D II+V LTPNR+DC+ ++G+A Sbjct: 121 GMLCAEAELQLSDAYEGLMELPADAPVGQDFREYLGLNDSIIEVDLTPNRADCLSLKGLA 180 Query: 176 LDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 ++ G L ++ P S SI K L+D+ C + +KGV + P Sbjct: 181 REV-----GTLNNEDVCEPKIEAVSASIQDTFKVTLEDAESCPKYLGRVIKGVDVSAQTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM +RL+ G+RSI +VD+TNYV L++G P H FD ++++ + VR+A EK+ LD Sbjct: 236 LWMVERLRRSGIRSIDPIVDVTNYVLLEQGQPMHGFDLAKLNGQIHVRKAKQDEKLTLLD 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE L D +VIA D + +IAG++GG+ +G + +T + +EVA ++PI IA + G Sbjct: 296 GQEVKLDDDTLVIADDQKALAIAGVMGGEDSGVNSDTQYIFLEVAYFNPIAIAGKARKYG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TDS +RFERGVD + P ++ LIL +CGG A + + T P I Sbjct: 356 LHTDSSHRFERGVDFELQAPAMERATQLILEICGGEAGPVVESIEQTAMPASASIDLRAD 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 VK + +++P E +L RLG V ++V PS+R D+ +ADL+EEI RIYG Sbjct: 416 RVKEILALELPAEQIEEMLTRLGMKVSSTDAGWKVDAPSYRFDMAIEADLIEEIARIYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQ---QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++ LP+ L +Q Q+ +K++ E + +SF+ + L Sbjct: 476 NK-----LPVNTPSAAIGLQVQEEVQTPVEVIKQLWVDLGYQEAITYSFVDPKIQKLVDP 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEGQ 584 L + NPISADM MR++L GL+KA N++R +FE V + + Q Sbjct: 531 SIDALALANPISADMGVMRSTLWVGLIKAAEHNLNRQQDTVRLFETGLRFVPQANGELEQ 590 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS---LRFE 641 M +GI G +G W++ S + VD +D K D +E + L+ +RFE Sbjct: 591 TPMISGILCGQQVSKG----WTNPSAK----VDFYDLKGD----VEAMLGLNGASDIRFE 638 Query: 642 SGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G S HPG++ ++K +I G G HP + G+ P+ FE+ L+++ Sbjct: 639 RGEHSALHPGQAAKVVKNGKDI--GLLGALHPELQKQLGIKTPLFVFELDLNAV-----S 691 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSL 758 LS V RDLAF+V++ + + +II K D+LI +VT+FDV++G+ + Sbjct: 692 EGVLPHFAPLSKYPEVSRDLAFVVEESVTWSQVEDIIREKAGDKLI-NVTLFDVYRGQGI 750 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+A+ + Q T D++I ++ IV+++ + +A LR Sbjct: 751 ENGRKSLALGLTWQDASRTLNDEEITSWVNDIVQSLAEGLDAQLR 795 >gi|70729486|ref|YP_259224.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf-5] gi|91208130|sp|Q4KEV9|SYFB_PSEF5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|68343785|gb|AAY91391.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas fluorescens Pf-5] Length = 792 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 275/819 (33%), Positives = 440/819 (53%), Gaps = 44/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTPAAGDFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKVPFAMIGAQLP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + + + +MELP+DAPVG + YL L D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSQAELQIGEGNDGLMELPVDAPVGEDVRTYLSLDDASIEVDLTPNRGDCLSLAGMAREV 178 Query: 179 VAAGLGKLKEINI-SCPLSSESI-PLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A K++ + + P + + + P+E+ + C + V+ V + P WM Sbjct: 179 GALYAAKVQRPEVPAIPAAHDEVRPVEVLA----PAACPRYLGRVVRNVDLSKPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRADVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G NT DV +E A +D I +A ++ G+ TD Sbjct: 295 TLRSDTLVIADHTRALAIAGVMGGEHSGVTANTRDVFLESAFFDQIAVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ L+L + GG A I + + P + + + Sbjct: 355 ASHRYERGVDWQLAREAMERATGLLLEITGGDAGPIIETLSEQHLPSVAPVTLRAERITQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+++ + R+L LG +V + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMEIDGLEVERLLTALGLTVTADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E + +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQAKAEAEGDLP-------ALRRLLVARGYQEAITYSFIDPKLFELFNPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QK 585 L + NPISADM+ MR+SL PGL+KA N++R +FE + EG Q+ Sbjct: 528 VEPLLLANPISADMAVMRSSLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQL-EGLKQQ 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +LD+ F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRDG----VDFFDVKADVEAVLGFAGALDAFTFVPGKH 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I+ V G+ G HP + GL P+ FE+ L S+ + + Sbjct: 639 PALHPGQTARIERDGREV-GFLGAIHPELAKNLGLDRPVYVFELVL-----SEVAQGRLP 692 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 K LS V+RDLA + D+ + A +++++I+ N + D+ +FDV+QGK + +KS Sbjct: 693 KFHELSRFPEVRRDLALLADRDVAASSVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRKS 752 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 753 LAVGLTWQHPSRTLNDDEVNSTTQNILTSLEQRLNATLR 791 >gi|89094708|ref|ZP_01167644.1| phenylalanyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] gi|89081054|gb|EAR60290.1| phenylalanyl-tRNA synthetase beta subunit [Oceanospirillum sp. MED92] Length = 798 Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust. Identities = 266/824 (32%), Positives = 440/824 (53%), Gaps = 48/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MKF+ WL++ ++ + + I D +T GLEV++V+ A FT V ++L+ E++P+ Sbjct: 1 MKFSEKWLRELVNPAIDTQGIVDQITMAGLEVDEVE--AAAKDFTGVVVGEILAAEQHPN 58 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIES 114 D + T ++E QVVCGAPN R GL +A G+ +P + + K+R +ES Sbjct: 59 ADKLQVCKVTDGNEEFQVVCGAPNARAGLKTAFATIGAVLPGPDGKDFKIKKAKLRQVES 118 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+E EL +SDD IMELP +APVG + +YL L D IIDV LTPNR DC+ + G+ Sbjct: 119 FGMLCAEDELGISDDHDGIMELPANAPVGTSIREYLNLDDKIIDVDLTPNRGDCLSIAGL 178 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 A ++ G L + ++ E+ + +L D++ C + ++G+ Sbjct: 179 AREV-----GVLNKAPVTFVEDKETAAVIDDTFAVELKDAADCPRYVGRVIRGIDPAAET 233 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+Q+L+ G+RSI +VD+TNYV L+ G P H FD +++ + VRRA GEK+ L Sbjct: 234 PLWMKQKLERSGVRSIDPVVDVTNYVLLELGQPMHAFDLDKLAGGIVVRRAEQGEKLTLL 293 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE +L+ D + I ++AGI+GG+ T ++ +E A ++PI+IA ++ Sbjct: 294 DGQEVELNADTLAITDANGPVAMAGIMGGEPTSVTAETKNIFLESAFFNPISIAGRARSY 353 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMN 408 G+ TDS +RFERGVD Q + L+L + GG A + N P R++ + Sbjct: 354 GLHTDSSHRFERGVDWQLQTRAINRATELLLDIVGGEAGPVTETANQDELPSDRQVFLRH 413 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++V + D+P E+ IL RLG V ++ VSVPS+R D+ + DL+EE+ R+ Sbjct: 414 AKVNAMLAFDMPAEEIEEILTRLGLGVEKTSTEGEWHVSVPSYRFDIAIEVDLIEELARV 473 Query: 467 YGVDQI----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 YG + + + +P+ + D+ +++QQ V+R L + E + +SFI + Sbjct: 474 YGYNNLPVRTPTASMPIKE-RDETKVAIQQ-----VRRALIALGYQEAITYSFIEAGLAK 527 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F + + NPISA+M+ MRT++ PGL KA N +R + +FE + + + Sbjct: 528 QFDDKYEAIALANPISAEMAVMRTTIWPGLAKALQHNQNRQQSRVRMFESGQRFLPTSGD 587 Query: 583 G--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 Q+ + AGI GS EG W+ ++ VD FD K D S++ + D F Sbjct: 588 EIIQENVVAGILAGSRDPEG----WNAGKDQ----VDFFDIKGDLESLLALGGAEDEFSF 639 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + HPG++ I+ + + V G+ G HPN++ GL+ P+ FE+ ++ Sbjct: 640 VADRHVALHPGQTARIERNGQPV-GFIGALHPNLVKELGLNGPVYLFEINQAAL-----L 693 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 + K + +S +RDLA IV++ I ++ K + ++T+FDV+QG+ + Sbjct: 694 QGKLPRYTEISKFPESRRDLAVIVEEGIAFDSVRQAAEKQAGEFLKNITLFDVYQGQGIE 753 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G+KS+A+ + Q T D++I +D +V + + A LR Sbjct: 754 KGRKSLALGLTWQHPSRTLNDEEINSAIDAVVSALTSEFGASLR 797 >gi|237743169|ref|ZP_04573650.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] gi|229433465|gb|EEO43677.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 7_1] Length = 798 Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust. Identities = 279/819 (34%), Positives = 450/819 (54%), Gaps = 36/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDIGEGEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPMIEITETIESINTMVKVDIEDKERCKRYMGRVIKNVKVQDSPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VD+TN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDVTNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D++T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNDTKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDIENLSTVMSRAVSLIAEVAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + E+ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 SLTYEEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N + + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -IPVMSIESGEENTNFKISRI--VREILKEMGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N G + I Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKN---LGAEKDGLAIEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSW 647 GI SGR LW ++S+ F DL + + L+V SL L+ P+ Sbjct: 593 KIGIILSGREDKNLW-NQSKTDYNFYDLKGYLEFLLEKLNVTR--YSLTRLK----NPN- 644 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKK 706 +HPG S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 645 FHPGASAEIKI-GEDVIGVFGELHPNLVNYFGIKREKLFFAELNLTKLL----KYIKIKV 699 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSV Sbjct: 700 NYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSV 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ ++++ T D+DI M+ I+E + K N +R Sbjct: 760 AMSIVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|117920309|ref|YP_869501.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella sp. ANA-3] gi|117612641|gb|ABK48095.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella sp. ANA-3] Length = 795 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 271/824 (32%), Positives = 445/824 (54%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFSGVVIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGSGELIDIVCGAPNCRQGLRVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + DS I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGIDIDSDGIIELPLDAPLGTDLREYLQLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P + +I ++ ++ +S+ C + VK V A P WM Sbjct: 180 -----GVLNRAAVTEPQWQAVTPTIDAKVAINVKESAACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA + ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADNVCPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVMDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G VP D + ILERLGF V+ ++V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KILGHHVPDSDVVEILERLGFGVVAGEGSWQVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNVAPVASLRMSDHKETDLSLKR---VRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR S+ GLL A G N R +FE + D +G+ Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDI-----NAESGV 586 Query: 592 RKGS------SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 R+ + +G++ W+ +S + VD FD K D ++I VS F Sbjct: 587 RQQAMLGCIITGLQNDEH-WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKK 700 S HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 642 SALHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA- 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + Sbjct: 700 ---------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVE 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + +Q T + +I ++ +V + + NA LR Sbjct: 751 PGKKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|256027575|ref|ZP_05441409.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium sp. D11] gi|289765534|ref|ZP_06524912.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] gi|289717089|gb|EFD81101.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. D11] Length = 798 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 279/819 (34%), Positives = 450/819 (54%), Gaps = 36/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDIGEGEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPMIEITETIESINTMVKVDIEDKERCKRYMGRVIKNVKVQDSPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VD+TN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDVTNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D++T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNDTKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDIENLSTVMSRAVSLIAEVAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + E+ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 SLTYEEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N + + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -IPVMSIESGEENTNFKISRI--VREILKEMGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N G + I Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKN---LGAEKDGLAIEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSW 647 GI SGR LW ++S+ F DL + + L+V SL L+ P+ Sbjct: 593 KIGIILSGREDKNLW-NQSKTDYNFYDLKGYLEFLLERLNVTR--YSLTRLK----NPN- 644 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKK 706 +HPG S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 645 FHPGASAEIKI-GEDVIGVFGELHPNLVNYFGIKREKLFFAELNLTKLL----KYIKIKV 699 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSV Sbjct: 700 NYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSV 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ ++++ T D+DI M+ I+E + K N +R Sbjct: 760 AMSIVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|29654619|ref|NP_820311.1| phenylalanyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 493] gi|154705952|ref|YP_001424758.1| phenylalanyl-tRNA synthetase subunit beta [Coxiella burnetii Dugway 5J108-111] gi|165924068|ref|ZP_02219900.1| phenylalanyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] gi|212212298|ref|YP_002303234.1| phenylalanyl-tRNA synthetase subunit beta [Coxiella burnetii CbuG_Q212] gi|41018331|sp|Q83C15|SYFB_COXBU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29541887|gb|AAO90825.1| phenylalanyl-tRNA synthetase beta chain [Coxiella burnetii RSA 493] gi|154355238|gb|ABS76700.1| phenylalanyl-tRNA synthetase beta chain [Coxiella burnetii Dugway 5J108-111] gi|165916500|gb|EDR35104.1| phenylalanyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 334] gi|212010708|gb|ACJ18089.1| phenylalanyl-tRNA synthetase beta chain [Coxiella burnetii CbuG_Q212] Length = 792 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 264/817 (32%), Positives = 440/817 (53%), Gaps = 38/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ V EK+ LT GLEV+ V L + +V++ E++PD D Sbjct: 1 MKLSEQWLREWVNPPVDTEKLTAQLTMAGLEVDSVKPAARTLEKVVVGEVIAREKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G+ + +++VCGAPNVR GL ++ V K+RG+ S GM+ Sbjct: 61 RLSVCRVDVGEDEPLEIVCGAPNVRTGLKVAVV--LVGGVVGDLKVKKTKLRGVVSNGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+E+ LS+ IMELP DAP+G + +YL L D I+D+ LTPNR DC VRGIA ++ Sbjct: 119 CSEREMGLSEQHEGIMELPADAPIGKNIQEYLTLDDYILDIELTPNRGDCASVRGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMR 235 A +K N+ ++ + P+E+K + C + ++GV ++ P W+ Sbjct: 179 GAINRLPIKGPNLVTVSATINDVFPVEVKAE----KACPRYIGRVIRGVDSHSQTPLWIC 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLR+I +VD+ NYV L+ G P H FD SR+ + + VR A + EKI +D E Sbjct: 235 ERLRRSGLRTIHPVVDVMNYVMLELGQPLHAFDLSRLVEGIEVRFAKADEKITLIDETEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ +VIA R Q++AGI+GG ++ ++ T + +E A + P IA + ++ + TD Sbjct: 295 ALTERMLVIADKSRPQALAGIMGGANSAVNEKTEAIFLESAYFSPGEIALTARHYDMQTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVK 412 S YRFERGVD + ++ L++ + GG+ ++C ++ PR I+ +K Sbjct: 355 SSYRFERGVDFKLQTLAMERATELLIQITGGSPGPLIEVCSETHLPKIPR-IILRPERIK 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL GI++ ++ ++LE LG V+ E + + V+VPS R D++E+ADL+EE+ +YG D+I Sbjct: 414 RLLGIEINEDEVSKLLELLGMRVVKEKNNWVVTVPSHRFDIKEEADLIEELAHLYGYDRI 473 Query: 473 KSEPLPLTQVEDKRNL---SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P ++E + + S Q + ++ ++ R E V +SF++ E L Sbjct: 474 -----PQLRMEGEYTIAPFSETQLSSARLRCLMTDRGYHEAVTYSFVNDELQTLLNPEVT 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A+M+ MRTSL PGL++ N R +FE+ + E Q+ Sbjct: 529 SIALSNPLTAEMNVMRTSLWPGLIQVLKYNQARQTHRIRLFEIGMCFNAAGNEWQQVTKL 588 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G + W++K R VD +D K D ++ + RF G H Sbjct: 589 G---GLVAGDAHSLQWAEKG----RRVDFYDVKGDLSALFTLTRTEAHFRFAEGHHPALH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S + + + GY G HP ++D L+ FE+ L++I K + K Sbjct: 642 PGQSAALYYKDQCI-GYLGALHPELVDQLELTAAPFLFEMELNAI-----KTSILPKYHP 695 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ-GKSLGEGKKSVAI 767 LS ++RD+A +VD+ +P G + IK+ +L+ VFD+++ GK + GKKSVA+ Sbjct: 696 LSKFPSIRRDIAIVVDRDVPVGNIEEEIKSTAGQLLIITQVFDIYESGKHIEFGKKSVAL 755 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + Q T D +++ +++R++ + +K NA LR+ Sbjct: 756 GLTFQDPSRTLIDGEVKQIIERVLAALERKFNAKLRA 792 >gi|254302370|ref|ZP_04969728.1| phenylalanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322562|gb|EDK87812.1| phenylalanine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 798 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 268/816 (32%), Positives = 450/816 (55%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + L+ I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLNNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G+ + +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGEGEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGTEYREYMGLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K + + ESI +K D+DD CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPMVQMNETIESINTMVKVDIDDKDRCKRYMGRVIKNVKVQESPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEEITTLDGIDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D+ T +V VEVA + P NI ++ ++LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNETKNVFVEVAYFTPENIRKTSRDLGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDIENLNNVMARAVSLIAEVSGGDVLSEVIDKYVEKPKRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + ++ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 KLTYDEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N++ + SR V+ +L + EV+N+SFI K +F G +EI Sbjct: 479 -MPVMSIEAGEENINFKMSRI--VREILKELGLNEVINYSFIPKFTKEIFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S + N G + I Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFRN---LGAEKNGLAIEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ + +HP Sbjct: 593 KIGIILSGREDKNLW-NQSKTDYNFYDL----KGYLEFLFERLNVTKYSLTRLKDNNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G S IK E V+G FGE HPN++++FG+ +++ I +++ + KV + Sbjct: 648 GASAEIKI-GEDVIGVFGELHPNLVNYFGIKRE----KLFFAEINLTKLLKYIKIKVNYE 702 Query: 711 S-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M+ I+E + +K N +R Sbjct: 763 IVLRDKNRTLTDEDIDTAMNTILELIKEKYNGEIRK 798 >gi|260495351|ref|ZP_05815478.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_33] gi|260197129|gb|EEW94649.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_33] Length = 798 Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust. Identities = 280/819 (34%), Positives = 450/819 (54%), Gaps = 36/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDIGEGEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPMIEITETIESINTMVKVDIEDKERCKRYMGRVIKNVKVQDSPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D++T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNDTKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDIENLSTVMSRAVSLIAEVAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + E+ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 SLTYEEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N + + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -IPVMSIESGEENTNFKISRI--VREILKEMGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N G + I Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKN---LGAEKDGLAIEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSW 647 GI SGR LW ++S+ F DL + + L+V SL L+ P+ Sbjct: 593 KIGIILSGREDKNLW-NQSKTDYNFYDLKGYLEFLLERLNVTR--YSLTRLK----NPN- 644 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKK 706 +HPG S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 645 FHPGASAEIKI-GEDVIGVFGELHPNLINYFGIKREKLFFAELNLTKLL----KYIKIKV 699 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSV Sbjct: 700 NYESISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSV 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ ++++ T D+DI M+ I+E + K N +R Sbjct: 760 AMSIVLRDKNRTLTDEDIDKAMNIILELIKDKYNGEIRK 798 >gi|161831139|ref|YP_001597170.1| phenylalanyl-tRNA synthetase subunit beta [Coxiella burnetii RSA 331] gi|161763006|gb|ABX78648.1| phenylalanyl-tRNA synthetase, beta subunit [Coxiella burnetii RSA 331] Length = 792 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 264/817 (32%), Positives = 440/817 (53%), Gaps = 38/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ V EK+ LT GLEV+ V L + +V++ E++PD D Sbjct: 1 MKLSEQWLREWVNPPVDTEKLTAQLTMAGLEVDSVKPAARTLEKVVVGEVIAREKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G+ + +++VCGAPNVR GL ++ V K+RG+ S GM+ Sbjct: 61 RLSVCRVDVGEDEPLEIVCGAPNVRTGLKVAVV--LVGGVVGDLKVKKTKLRGVVSNGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+E+ LS+ IMELP DAP+G + +YL L D I+D+ LTPNR DC VRGIA ++ Sbjct: 119 CSEREMGLSEQHEGIMELPADAPIGKNIQEYLTLDDYILDIELTPNRGDCASVRGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMR 235 A +K N+ ++ + P+E+K + C + ++GV ++ P W+ Sbjct: 179 GAINRLPIKGPNLVTVSATINDVFPVEVKAE----KACPRYIGRVIRGVDSHSQTPLWIC 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLR+I +VD+ NYV L+ G P H FD SR+ + + VR A + EKI +D E Sbjct: 235 ERLRRSGLRTIHPVVDVMNYVMLELGQPLHAFDLSRLVEGIEVRFAKADEKITLIDETEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ +VIA R Q++AGI+GG ++ ++ T + +E A + P IA + ++ + TD Sbjct: 295 ALTERMLVIADKSRPQALAGIMGGANSAVNEKTEAIFLESAYFSPGEIALTARHYDMQTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVK 412 S YRFERGVD + ++ L++ + GG+ ++C ++ PR I+ +K Sbjct: 355 SSYRFERGVDFKLQTLAMERATELLIQIIGGSPGPLIEVCSETHLPKIPR-IILRPERIK 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL GI++ ++ ++LE LG V+ E + + V+VPS R D++E+ADL+EE+ +YG D+I Sbjct: 414 RLLGIEINEDEVSKLLELLGMRVVKEKNNWVVTVPSHRFDIKEEADLIEELAHLYGYDRI 473 Query: 473 KSEPLPLTQVEDKRNL---SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P ++E + + S Q + ++ ++ R E V +SF++ E L Sbjct: 474 -----PQLRMEGEYTIAPFSETQLSSARLRCLMTDRGYHEAVTYSFVNDELQTLLNPEVT 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A+M+ MRTSL PGL++ N R +FE+ + E Q+ Sbjct: 529 SIALSNPLTAEMNVMRTSLWPGLIQVLKYNQARQTHRIRLFEIGMCFNAAGNEWQQVTKL 588 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G + W++K R VD +D K D ++ + RF G H Sbjct: 589 G---GLVAGDAHSLQWAEKG----RRVDFYDVKGDLSALFTLTRTEAHFRFAEGHHPALH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S + + + GY G HP ++D L+ FE+ L++I K + K Sbjct: 642 PGQSAALYYKDQCI-GYLGALHPELVDQLELTAAPFLFEMELNAI-----KTSILPKYHP 695 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ-GKSLGEGKKSVAI 767 LS ++RD+A +VD+ +P G + IK+ +L+ VFD+++ GK + GKKSVA+ Sbjct: 696 LSKFPSIRRDIAIVVDRDVPVGNIEEEIKSTAGQLLIITQVFDIYESGKHIEFGKKSVAL 755 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + Q T D +++ +++R++ + +K NA LR+ Sbjct: 756 GLTFQDPSRTLIDGEVKQIIERVLAALERKFNAKLRA 792 >gi|24373646|ref|NP_717689.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella oneidensis MR-1] gi|30316224|sp|Q8EF99|SYFB_SHEON RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|24347990|gb|AAN55133.1|AE015650_3 phenylalanyl-tRNA synthetase, beta subunit [Shewanella oneidensis MR-1] Length = 795 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 275/822 (33%), Positives = 441/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS E + +T GLEV+ VD A + I +V+ +PD D Sbjct: 1 MKFSESWLREWVNPAVSREALSHQITMAGLEVDGVDAVAAEFNGVVIGEVVECGLHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + I +VCGAPN R GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLRVTKVSVGSSELIDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKKAKLRGMPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + DS I+ELP+DAP+G L +YL+L D +I+V LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGIDIDSDGIIELPLDAPLGTDLREYLKLDDAVIEVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P P ++ ++ +S+ C + VK V A P WM Sbjct: 180 -----GVLNRQAVTEPQWQAVTPTTDAKVTINVKESAACPRYLGRVVKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V ++ G P H FD ++++ + VR EKI LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNFVLVEFGQPMHAFDLAKLTGDIQVRLGNGEEKITLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA D R ++AG+ GG+++G D T D+L+E A + P+ I + LG+ T Sbjct: 295 VTIPSDTLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ KP +I+ S++ Sbjct: 355 DSSHRFERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSDADLPKPAQILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G VP D + ILERLGFSV+ ++V ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KILGHYVPDSDVVEILERLGFSVVKGEGCWQVITATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D + L R V+ +L +R E V +SF+ + L G++ + Sbjct: 475 PNVAPIASLRMSDHKETDLSLKR---VRSLLVARGFQEAVTYSFVDPKLQNLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R +FE V + + G Q+ M Sbjct: 532 VLPNPISSEMSAMRLSMFTGLLTAVGYNQSRQQGRVRLFETGLRFVPDINAESGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + G E W+ +S + VD FD K D ++I VS F S Sbjct: 592 LGCVITGPQNDEH----WAMES----KTVDFFDLKGDLEAIIGLTVSASEFSFRVATHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKKRT 702 HPG+ I + + V+G+ G HP++ FGL+ FE+ LD S+P++Q Sbjct: 644 LHPGQCAEILRN-DRVIGHIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQA--- 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S +RD+A +VD+ + AG ++ +I+ V + + + +FDV+ GK + G Sbjct: 700 -------VSKFPANRRDIAVVVDESVSAGDVMKLIRKVGENQLVGINLFDVYLGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I ++ +V + + NA LR Sbjct: 753 KKSLAIALTLQDTTRTLEEKEIAETVESVVSALKTEFNASLR 794 >gi|114562884|ref|YP_750397.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella frigidimarina NCIMB 400] gi|114334177|gb|ABI71559.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella frigidimarina NCIMB 400] Length = 795 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 431/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS + + +T GLEV+ +D A S I +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVSRDALSHQITMAGLEVDGIDAVAADFSGVIIGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSMGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP DAP+G + ++L+L D IIDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDIESDGIIELPTDAPIGVNVREFLQLDDAIIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 + E + ++ P I D LC + VK + + P WM+++ Sbjct: 180 GVLNRQAVTEPSWDAVTATIDAPFSINVVAPD--LCPRYLGRVVKNINVKASTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV ++ G P H FD + +S +TVR A EK+ LD E + Sbjct: 238 LRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLNTLSGGITVRLADGVEKLTLLDGNEITV 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA D + ++AG+ GG+ G ++NT D+L+E A + P+ I + LG+ TD+ Sbjct: 298 PSDTLVIADDKQAVALAGVFGGESTGVNENTQDILLECAFFAPLAIMGKSRRLGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +RFERGVD + V+ L+L +CGG A + A + + P KI S++ + Sbjct: 358 HRFERGVDPELQHKVMDRATRLVLDICGGEAGQVIEAVSAEHLPTAAKITLRRSKLDKTL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 G +P D + ILERLGFSV D + V+ ++R D+ + DL+EE+ RIYG + I + Sbjct: 418 GHFIPDSDVVEILERLGFSVQTSGDVWNVTTATYRFDMAIEEDLIEEVARIYGYNNIPNT 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P + D + + R V+ + +R E V +SF+ + + G+ + + Sbjct: 478 APKAALSMPDHKEADISLKR---VRSIFVARGFQEAVTYSFVDPKMQNIVHPGEEAMVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAG 590 NPIS +MS MR S+ GLL A G N R +FE + + D+ Q+ M Sbjct: 535 NPISVEMSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPDAQADSGVRQQAMLGA 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ E WS +S + VD FD K D ++I V+ F HP Sbjct: 595 VISGAQNEEH----WSMES----KTVDFFDLKGDLEAIIGLTVASTEFSFRGATHPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTKTK 705 G+ I + V+GY G HP++ FGL+ FE+ LD+ +P++Q Sbjct: 647 GQCAEILRNNR-VIGYIGAIHPSLEKPFGLNGKTIVFELELDALLHARLPLAQA------ 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +VD+ + A ++N+I+ V + + + +FDV+QGK + GKKS Sbjct: 700 ----VSKFPANRRDIAVVVDETVSATDVMNLIRKVGENQLVGLNLFDVYQGKGVEPGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q T D DI M+ +V + + NA LR Sbjct: 756 LAIALTLQDTTRTLEDKDITETMESVVSALKTEFNASLR 794 >gi|90417316|ref|ZP_01225242.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] gi|90330901|gb|EAS46164.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2207] Length = 792 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 272/812 (33%), Positives = 432/812 (53%), Gaps = 30/812 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MKF+ SWL+ ++ +S+E++ +T GLEV+ V++ +S + ++LSVE++PD D Sbjct: 1 MKFSESWLRSAVNPSISIEELVAQVTMAGLEVDAVESAAPEMSGVVVGEILSVEQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + G + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+C Sbjct: 61 KLRVCQVAGGGETAQVVCGAPNARAGIKVPFATVGAKLP-GDFKIKKAKLRGVESFGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 ++ EL L DD + ELP DA VG L +YLEL+D II+V LTPNR DC+ +RG+A ++ Sbjct: 120 AQTELQLGDDDDGLWELPADASVGSDLIEYLELNDNIIEVDLTPNRGDCLSIRGLAREV- 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQRL 238 L K + +C + SI I L+ C + V+ + P WM+++L Sbjct: 179 -GVLNKTAVLEQACAPVTASINDSISITLEAPEACARYVGRVVRNLDLRQPTPQWMQEKL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 + G+RS+ VD+TNYV L+ G P H FD S+I + VR EK+ LD+ + + Sbjct: 238 RRSGVRSLGPAVDVTNYVLLELGQPMHAFDLSKIDGGIVVRMG-RDEKVKLLDDSDVVID 296 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA + ++AGI+GG + D+TTD+L E A ++P+ IA +N G TDS + Sbjct: 297 TQTLVIADQSKALAMAGIMGGDESAVGDDTTDILFESAWFNPLAIAGKARNYGKHTDSSH 356 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLSG 416 RFERGVD + + ++ +L+L +CGG A + I + + P I ++ + + G Sbjct: 357 RFERGVDSELQVAAIERATALMLEICGGEAGPVVIQESAEHLPAPATIKLRDAHLAQQLG 416 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + + + IL RLG + + D+ V PSWR D+ + DLVEE+ RIYG + + + Sbjct: 417 VVIGSAEIDDILARLGLTFVSRDDEGSTWVAPSWRFDIAIEQDLVEEVARIYGYNNLPTS 476 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 P +E + QQ + + ++++AS E V +SF+ E L + + N Sbjct: 477 -TPTMALELQAKPERQQDLSIFRQQLVAS-GYQEAVTYSFVDPELQKLVDPETDGIALQN 534 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMA-AGIRK 593 PISADMS MRTSL GLL N++R IFE + + E + MA AG+ Sbjct: 535 PISADMSVMRTSLWSGLLSTAIYNLNRQQNRVRIFEAGQCFVPGENGELTQNMALAGLIC 594 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 GS G W+ ++ VD FD K D SV+ + F + HPG+S Sbjct: 595 GSRTPAG----WTASKDK----VDFFDIKGDLESVLALTGLAEQFSFSAAEHPALHPGQS 646 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 ++ + E V G+ G+ HP + +S P VYL + +++ ++ K +S Sbjct: 647 AMLSRNGEQV-GWIGQLHPKLQAQLDVSTP-----VYLFQVDVAKVSESRLPKFSEVSKF 700 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 V+RDLAF+VD I + L++ +N + L+ D+ +FDV+Q K + KS+A+ + Sbjct: 701 PAVRRDLAFLVDSQIASADLMSEARNAAGEHLV-DLMLFDVYQSKDIDNKGKSLALGLTF 759 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q T D++I +DR+V+ + K A LR Sbjct: 760 QHASRTLTDEEINTAIDRVVKKLDNKFKAELR 791 >gi|153207472|ref|ZP_01946172.1| phenylalanyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212218733|ref|YP_002305520.1| phenylalanyl-tRNA synthetase subunit beta [Coxiella burnetii CbuK_Q154] gi|120576603|gb|EAX33227.1| phenylalanyl-tRNA synthetase, beta subunit [Coxiella burnetii 'MSU Goat Q177'] gi|212012995|gb|ACJ20375.1| phenylalanyl-tRNA synthetase beta chain [Coxiella burnetii CbuK_Q154] Length = 792 Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust. Identities = 264/817 (32%), Positives = 439/817 (53%), Gaps = 38/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ V EK+ LT GLEV+ V L + +V++ E++PD D Sbjct: 1 MKLSEQWLREWVNPPVDTEKLTAQLTMAGLEVDSVKPAARTLEKVVVGEVIAREKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ + +++VCGAPNVR GL ++ V K+RG+ S GM+ Sbjct: 61 RLWVCRVDVGEDEPLEIVCGAPNVRTGLKVAVV--LVGGVVGDLKVKKTKLRGVVSNGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+E+ LS+ IMELP DAP+G + +YL L D I+D+ LTPNR DC VRGIA ++ Sbjct: 119 CSEREMGLSEQHEGIMELPADAPIGKNIQEYLTLGDYILDIELTPNRGDCASVRGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMR 235 A +K N+ ++ + P+E+K + C + ++GV ++ P W+ Sbjct: 179 GAINRLPIKGPNLVTVSATINDVFPVEVKAE----KACPRYIGRVIRGVDSHSQTPLWIC 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLR+I +VD+ NYV L+ G P H FD SR+ + + VR A + EKI +D E Sbjct: 235 ERLRRSGLRTIHPVVDVMNYVMLELGQPLHAFDLSRLVEGIEVRFAKADEKITLIDETEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ +VIA R Q++AGI+GG ++ ++ T + +E A + P IA + ++ + TD Sbjct: 295 ALTERMLVIADKSRPQALAGIMGGANSAVNEKTEAIFLESAYFSPGEIALTARHYDMQTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVK 412 S YRFERGVD + ++ L++ + GG+ ++C ++ PR I+ +K Sbjct: 355 SSYRFERGVDFKLQTLAMERATELLIQITGGSPGPLIEVCSETHLPKIPR-IILRPERIK 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL GI++ ++ ++LE LG V+ E + + V+VPS R D++E+ADL+EE+ +YG D+I Sbjct: 414 RLLGIEINEDEVSKLLELLGMRVVKEKNNWVVTVPSHRFDIKEEADLIEELAHLYGYDRI 473 Query: 473 KSEPLPLTQVEDKRNL---SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P ++E + + S Q + ++ ++ R E V +SF++ E L Sbjct: 474 -----PQLRMEGEYTIAPFSETQLSSARLRCLMTDRGYHEAVTYSFVNDELQTLLNPEVT 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP++A+M+ MRTSL PGL++ N R +FE+ + E Q+ Sbjct: 529 SIALSNPLTAEMNVMRTSLWPGLIQVLKYNQARQTHRIRLFEIGMCFNAAGNEWQQVTKL 588 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G + W++K R VD +D K D ++ + RF G H Sbjct: 589 G---GLVAGDAHSLQWAEKG----RRVDFYDVKGDLSALFTLTRTEAHFRFAEGHHPALH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S + + + GY G HP ++D L+ FE+ L++I K + K Sbjct: 642 PGQSAALYYKDQCI-GYLGALHPELVDQLELTAAPFLFEMELNAI-----KTSILPKYHP 695 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ-GKSLGEGKKSVAI 767 LS ++RD+A +VD+ +P G + IK+ +L+ VFD+++ GK + GKKSVA+ Sbjct: 696 LSKFPSIRRDIAIVVDRDVPVGNIEEEIKSTAGQLLIITQVFDIYESGKHIEFGKKSVAL 755 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + Q T D +++ +++R++ + +K NA LR+ Sbjct: 756 GLTFQDPSRTLIDGEVKQIIERVLAALERKFNAKLRA 792 >gi|19705412|ref|NP_602907.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|30316249|sp|Q8RHB5|SYFB_FUSNN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|19713405|gb|AAL94206.1| Phenylalanyl-tRNA synthetase beta chain [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 798 Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust. Identities = 270/816 (33%), Positives = 444/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G + +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGGEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFTKESEGIIILPEDAPIGTEYREYMNLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P+W++ R+ Sbjct: 180 AAYYNRKVKYPMIEITETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPDWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKKNEEITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D+ T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNETKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLSNVMARAVSLIAEVAGGDVLSEVIDKYVEKPQRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +GE + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGEGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N++ + R V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -IPVMSIESGEENINFKMPRI--VRGILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N G + I Sbjct: 536 NPLSEDMAIMRPTLLYSLITNIRDNINRNQTDLKLFEISKTFKN---LGAEKDGLAIEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ S +HP Sbjct: 593 KVGIILSGREDKNLW-NQSKTDYNFYDL----KGYLEFLLERLNVTKYSLTRLENSNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK +I+ G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GASAEIKIGEDII-GVFGELHPNLVNYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D DI M+ I+E + K N +R Sbjct: 763 IILRDKNRTLTDGDIDTAMNTILELIKDKYNGEIRK 798 >gi|296328810|ref|ZP_06871324.1| phenylalanyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154145|gb|EFG94949.1| phenylalanyl-tRNA synthetase beta subunit [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 798 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 268/816 (32%), Positives = 445/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G + +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGGEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGTEYREYMNLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P+W++ R+ Sbjct: 180 AAYYNRKVKYPMIEITETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPDWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKKNEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAG+IGG++ D+ T ++ VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIAGVIGGQNTQIDNETKNIFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLNVVMARAVSLIAEVTGGDVLSEVIDKYVEKPQRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +GE + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGEGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N++ + R V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -IPVMSIESGEENINFKMPRI--VRGILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N E + ++ Sbjct: 536 NPLSEDMAIMRPTLLYSLITNIKDNINRNQTDLKLFEISKTFKNLGAEKDELAIEDLK-- 593 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI +GR LW ++S+ F DL L + +++ + +HP Sbjct: 594 -IGIILAGREDKNLW-NQSKTDYNFYDL----KGYLEFLFERLNITKYSLTRLKNNNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK +I+ G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GASAEIKIGEDII-GVFGELHPNLVNYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D DI M+ I+E + K N +R Sbjct: 763 IILRDKNRTLTDGDIDTAMNTILELIKDKYNGEIRK 798 >gi|225025639|ref|ZP_03714831.1| hypothetical protein EIKCOROL_02541 [Eikenella corrodens ATCC 23834] gi|224941589|gb|EEG22798.1| hypothetical protein EIKCOROL_02541 [Eikenella corrodens ATCC 23834] Length = 786 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 265/805 (32%), Positives = 438/805 (54%), Gaps = 44/805 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++ D D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHSDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDASTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGVNIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 + A K+ I + P++ S P++I D + C F ++ V V P+WM Sbjct: 180 VSALTGCAFKQPAIHAAPITGSRKQPVQI----DAPADCGRFISRVIENVNARAVTPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D+T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEALGRLPENKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWEHDFAVNANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYMAAGI 591 NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q G+ Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFSKGSDGQFVQNERIGGL 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G++ E G E+ R D +D KAD +E + ++ F HPG Sbjct: 593 WYGAAMPEQWG--------EKTRNADFYDIKAD----VENLLKNKAVEFVKTEHPALHPG 640 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I + + V+G+ GE HP L + L FE+ D + ++++T+ + V S Sbjct: 641 RAANIVSDGQ-VIGFVGELHPKWLQKYDLPQAPLVFEI--DMAAVLEREKTRYQAV---S 694 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-----LIDDVTVFDVFQGKSLGEGKKSVA 766 PV+RDLAF+V P T ++ R LI ++T+FDV++G L E KS+A Sbjct: 695 KFQPVRRDLAFVV----PEVTTFEQLQAASRGVKSDLIQEITLFDVYRGVGLPENMKSMA 750 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIV 791 ++V++Q + T DD + ++ +++ Sbjct: 751 VKVILQDAERTLTDDTVEEIVHKLI 775 >gi|307822735|ref|ZP_07652966.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] gi|307736339|gb|EFO07185.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacter tundripaludum SV96] Length = 791 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 268/813 (32%), Positives = 441/813 (54%), Gaps = 33/813 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + +WL+++++ ++ E++ + LT GLEV+ V A S + +V+++E++PD D Sbjct: 1 MQISEAWLREYVNPAITTEQLVEQLTMAGLEVDSVTPAAAVFSGVVVGEVVAMEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + +Q+VCGA NVRVGL A G+ +P + + K+RG+ES GM+ Sbjct: 61 RLKVCQVAVGEAEPLQIVCGASNVRVGLRIPAALIGAVLP-GDFKIKKSKLRGVESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+ D+ +MEL DAPVG + DYL L+D II+V LTPNR+DC+ V GIA ++ Sbjct: 120 CSEKELGLAADANGLMELAADAPVGVDIRDYLSLNDNIIEVDLTPNRADCLSVEGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L K+ S+ S + ++ + C + +KGV P WM++R Sbjct: 180 --AVLNKMDWSATQVEKSAVSHADTLIVSVEATDACPRYLGRLIKGVNPKAETPLWMQER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RS+SA+VD+TNYV ++ G P H FDA+++S + VR A + E I+ L+ Q L Sbjct: 238 LRRSGVRSLSAVVDVTNYVLIELGQPLHAFDAAKLSGSINVRYAKTDESIVLLNGQTIKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA D + ++AG++GG + D+T DV +E A + P +IA +N G+ TDS Sbjct: 298 DNETLVIADDNQALALAGVMGGSESAVSDDTQDVFLECAFFIPQSIAGKARNYGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +RFERGVD ++ LI+ + GG+ I + P++ ++ +++ Sbjct: 358 HRFERGVDPTLQERAIERATQLIIDIAGGSVGAITEVTTASTLPQRSAVLLRKLRLEKTL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 I++ E + I +RLG SV + D + V+ P R D+ +ADL+EE+ RI G + + + Sbjct: 418 SINLADEQVVDIFQRLGMSVQTQPDSWSVTPPGCRFDIAIEADLIEEVARIVGYNNLPNS 477 Query: 476 PLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 L + +++ L R VK +L R E + +SF+ ++ + + + Sbjct: 478 SLLMRSELGKATEAVLDLDR---VKDLLVDRGYQEAITYSFVDEDIQQVVAPDDDVIRLK 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEGQKYMAAGIRK 593 NPIS+D+S MRT+L GLLKA N +R FE + N D Q+ M +G+ Sbjct: 535 NPISSDLSVMRTTLWCGLLKAALHNTNRQQNRVRFFETGLRFVNKDDNMQQQKMLSGLAL 594 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD--SLRFESGAPSWYHPG 651 GS+ +S++ R VD FD KAD ++ SL +++F HPG Sbjct: 595 GSA--------YSEQWGVATRKVDFFDVKAD----MQALFSLTGAAVQFVQAKHHALHPG 642 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 ++ I + +G+ G HP + G + FE LD + K+ K K LS Sbjct: 643 QTAEILSQQGDKIGWLGMLHPTLEKQLGFDTQVFLFE--LDQDLLLNKQIPKFKP---LS 697 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 V+RD+A IV + + ++N IK ++ + D+ VFD+++GK + EG KSVA+ ++ Sbjct: 698 KYPSVRRDIALIVKEEVAVSEIINCIKGCAEQTLQDIVVFDIYRGKGVEEGSKSVALSLV 757 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 IQ T D +I + ++E + K +A LR Sbjct: 758 IQDFSQTLTDSEIDAIFSGLLETLTTKISAKLR 790 >gi|294788684|ref|ZP_06753926.1| phenylalanyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] gi|294483561|gb|EFG31246.1| phenylalanyl-tRNA synthetase, beta subunit [Simonsiella muelleri ATCC 29453] Length = 787 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 257/816 (31%), Positives = 437/816 (53%), Gaps = 42/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F SWLK +T+ + E++ LT GLEVE+++ A + + +V SVE++PD D Sbjct: 1 MQFPYSWLKTQANTNQTPEQLAHLLTMAGLEVEEMNPAAPAFTGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + IQ+VCGAPNVR G+ A P + +PEN + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELIQIVCGAPNVRAGIKVPCALPNAVLPEN-FKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L ++ ++ LP +APVG + ++L+L D + + +TPNR+DC+ ++G+A + Sbjct: 120 CSAKELGLPENGVDGLLVLPENAPVGQNIREFLDLDDTLFTLKITPNRADCLSIKGLARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A + I I+ + + +K D D C F + V +P+W+ Q Sbjct: 180 VSALTQCEFNPIKINHIPNQTTQKQAVKIDAPDD--CGRFITRVISDVNATAPSPDWLVQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RS+SALVDI NYV L+ G P HVFDA ++ L +RRA +GE + L+ + Sbjct: 238 RLERAGIRSVSALVDIGNYVMLELGQPMHVFDADKLIGSLNIRRAKNGEVLECLNEKTVT 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + + SIAG++GG + D T ++++E A + P I+ + G +DS Sbjct: 298 LSDNTLVVADEKQALSIAGLMGGAASAVSDTTQNIVLESAWFRPEIISGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 + FERGVD Q ++ L++ +CGG +I + + +V + ++++ G Sbjct: 358 SFCFERGVDFQLQRDAIERATELVIEICGGQVGEIVEEIAKLPENKTVVVRTARIEKMLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE- 475 + +P E IL LG D F+V+ PS+R D+E +ADL+EEI R+YG + I + Sbjct: 418 VQIPSEQVEMILHHLGLQPEKTVDGFQVTAPSFRYDIEIEADLIEEIARVYGYENIPDDR 477 Query: 476 ---PLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 L + ++ + R R+R+ V + +A R EVV+++F++++ F Q + Sbjct: 478 TAGKLAMLRLPENR-------RSRFGVYQKMAERGFQEVVSYAFVNEDWEQDFANNQNPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---QKYMA 588 + NP++A + MR++L+ GL++ N++R +FE++ ++ Q Sbjct: 531 RLQNPLAAQYAVMRSTLMGGLIEILQNNLNRKQNRVRVFEIARTFQKSNKNNEFIQTEKL 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G+ GS E W K+ R VD +D K D +E + + +F Sbjct: 591 GGLVYGSVLPEQ----WGAKA----RSVDFYDVKGD----VEALLQGKNAQFVKAEHPAL 638 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR I+ E V G GE HP + L FE+ + I ++K R +T Sbjct: 639 HPGRCATIQIDGENV-GIIGELHPKWTQKYDLPQAPLLFELDMSVILATEKVRYQT---- 693 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 +S PV+RDLAF++ +++ L + V LI + +FDV++G L E KS+A+ Sbjct: 694 -VSKFQPVRRDLAFVLPENVAFADLQAALNAVQSDLIQSIELFDVYRGVGLPENHKSMAV 752 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++++Q ++ T D+ + L+ +++E +K A LR Sbjct: 753 KIILQSMETTLTDEIVEPLIQQLIEE-AEKVGAKLR 787 >gi|110834698|ref|YP_693557.1| phenylalanyl-tRNA synthetase subunit beta [Alcanivorax borkumensis SK2] gi|110647809|emb|CAL17285.1| Phenylalanyl-tRNA synthetase, beta subunit [Alcanivorax borkumensis SK2] Length = 799 Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust. Identities = 280/828 (33%), Positives = 434/828 (52%), Gaps = 55/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F +WL++ ++ + E + LT GLEV+ V+ A + + +V S E +PD D Sbjct: 1 MRFNEAWLREWVNPAIDTETLVQQLTMAGLEVDAVEPAAPAFTGVVVGQVESCEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++ G +QVVCGA NVRVGL +A G+ +P + + K+RG ES GM+ Sbjct: 61 KLSVCQVTNGTDT-VQVVCGASNVRVGLKMPFAQVGAVLP-GDFKIKKAKLRGQESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C EL L D +MELP DAPVG DYL L D +I+V LTPNR+DC+ +RGIA ++ Sbjct: 119 CGASELGLEDLIDGLMELPEDAPVGTDFRDYLSLDDTVIEVDLTPNRADCLSLRGIAREV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L E +IS P+ +S+ + L DS+ C + +KGV N A P WM Sbjct: 179 GVMNQTALTEASISKVAPVIDDSLTVT----LADSAGCPRYLGRVIKGVDVNAATPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLR+I +VD+TNYV ++ G P H FD ++++ +TVR+A + EK+ LD+QE Sbjct: 235 ERLRRAGLRTIDPIVDVTNYVLVELGQPLHAFDLAKLNGGITVRKAKAEEKLTTLDDQEL 294 Query: 296 DLSPDNVVIA---SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 L D +VIA D ++AG++GGK + +T D+ +E A + P+ IA ++ G+ Sbjct: 295 TLRDDTLVIADDTDDSTALALAGVMGGKPSSVTTDTQDIFLECAFFAPLAIAGKARSYGL 354 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS +RFERGVD Q +++ +LI + GG A + + P++ + Sbjct: 355 HTDSSHRFERGVDPQLQNDAIEYATALIQKIAGGQAGPVTETADEAQLPKQAELTLRAER 414 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ L G+ +P + IL RLG + E +++ V PSWR D+ + DL+EE+ RIYG Sbjct: 415 IEGLLGMALPSQQVEDILSRLGMDISAKDEGEEWRVLAPSWRFDMAIEQDLIEELARIYG 474 Query: 469 VDQIKSE-PL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +++ S P P + ++L R + L R E + ++F+ Sbjct: 475 YEKLPSRVPAGSPSGDTVPEHIVAL-----RRLADTLMDRGYQEAITYTFVEPGLLAKVE 529 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 L +LNPIS D+ MRT+LL GL N++R +FE + D Sbjct: 530 PRVEPLPLLNPISMDLGVMRTTLLAGLFSTARHNLNRQADRLRLFETGLRFVPTDAADVE 589 Query: 582 EG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL---D 636 G Q M AG+ GS+ + W K R VD FD K D +E ++L D Sbjct: 590 GGLAQTPMIAGLLYGSAQPQN----WEGK-----RPVDFFDLKGD----VEALLALSDAD 636 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + FE HPG++ +K EIV GY G HP + L + FE L P+ Sbjct: 637 AFSFEPAEHPALHPGQTAALKRDGEIV-GYLGRIHPRLAADLDLPGQLYAFE--LAQAPL 693 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 Q + V S ++RDLAF+V+ IPAG L+ +++ D + V +FD++QG Sbjct: 694 QQGVLPSFQSV---SDQPRMRRDLAFVVEDSIPAGELIAAVRSTCDERLTGVNIFDIYQG 750 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+GE +KS+A+ + Q T +D ++ L+D +V + ++ NA+LR Sbjct: 751 DSIGENRKSLALGLTFQDRSRTLKDQEVNDLVDAVVSQLKQQFNAILR 798 >gi|304310703|ref|YP_003810301.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] gi|301796436|emb|CBL44644.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium HdN1] Length = 790 Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust. Identities = 267/819 (32%), Positives = 446/819 (54%), Gaps = 46/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ + +WL++ ++ + + L GLEV+ V+ A + + ++++ ER+PD + Sbjct: 1 MRVSEAWLREWVNPQIDTNTLVSQLAMAGLEVDAVEAVAGAFTQVVVGEIVAAERHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R++ G + +Q+VCGA N R G+ A G+ +P ++ + K+RG+ES GM+ Sbjct: 61 KLQVCRVNIGAAEPLQIVCGAANARPGIRVPCACVGAELP-GDIKIKRAKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ + + ELP DAP+G + Y+ L D +DV LTPNR DC+GV G+A ++ Sbjct: 120 CSVAELGLAESADGLFELPADAPIGQDIRAYMRLDDVSLDVDLTPNRGDCLGVAGLAREI 179 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 L EI ++ + P+ +K C + V+GV NV +P W++ Sbjct: 180 SVINRANLTIPEIVEIGATTTRTFPIRLK----AGRACPRYVGRVVEGVNVNVPSPLWLK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VD+TN V L+ G P H FD + + VR A +GE+I+ LD Q Sbjct: 236 EKLRRAGVRSIDPVVDVTNLVMLELGQPMHAFDLDTLQGAIEVRHAKAGEEIVLLDGQTL 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D+++I + R ++AGI+GG+ +G T + E A +D + +A + G+ TD Sbjct: 296 RLAEDDLLIVDEQRPLALAGIMGGELSGVSAKTRTIFFESAWFDQVMLAGKARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKIVFMNSEVK 412 + +RFERGVD Q ++ L+L++ GG ++ +A + + IV S + Sbjct: 356 ASHRFERGVDYQLQRRAVERATELLLAITGGQPGPTTEAVLADQLPHI-EPIVLRRSRIA 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ- 471 RL G+++P ILERLG V D + V PS+R DV +ADL+EE+ RI+G ++ Sbjct: 415 RLLGLEIPDATVEDILERLGMDVSALDDGWHVVPPSFRFDVRIEADLIEELGRIWGYERL 474 Query: 472 -IKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++ LP ++ +R +SL+++ K +L R EV+ +SF+ + G+ Sbjct: 475 PVRVPSLPFAPPMQSERVVSLERA-----KHLLIDRGYQEVITYSFVDAKYVAALTPGED 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 + NPISADMS+MRTS+ GLLK N++R +FE ++ + E Q M Sbjct: 530 ACVLSNPISADMSHMRTSIWAGLLKTAEYNLNRQQTRLRLFESGLIFRQNAGELVQTVML 589 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPS 646 G+ G++ E W++ +R R D FD KAD +E +SL ++ FE S Sbjct: 590 GGLIYGAAEAEA----WAN---DRNRQADFFDLKAD----VEALLSLTASAVEFEPCEHS 638 Query: 647 WYHPG-RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG R+ I++ I G G HP++ + G + P+ FE+ +P Q++ + + Sbjct: 639 ALHPGQRAAILREGQRI--GVLGALHPSLQNQLGFAKPVFLFEL---EVPALQRELPQFR 693 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 + LS V+RDLA IVD++ P +++ I++ V + +T+FDVFQG + G+KS Sbjct: 694 E---LSRFPGVRRDLAVIVDENTPTLSILKIVREVAGEWLTQLTLFDVFQGGRMEPGRKS 750 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VA V++Q T RDD++ +M +I + K+ N +LR Sbjct: 751 VAFGVVLQHSARTLRDDEVASVMSQITGALQKEFNVILR 789 >gi|56460502|ref|YP_155783.1| phenylalanyl-tRNA synthetase subunit beta [Idiomarina loihiensis L2TR] gi|66773860|sp|Q5QXL8|SYFB_IDILO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56179512|gb|AAV82234.1| Phenylalanyl-tRNA synthetase beta subunit [Idiomarina loihiensis L2TR] Length = 795 Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust. Identities = 261/814 (32%), Positives = 435/814 (53%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ D+S ++ + L+ GLEV+ V+ + + +V+ +PD D Sbjct: 1 MKFSEQWLREWVNPDISSHELSEQLSMAGLEVDAVEPVADEFHTVVVGEVIECGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGA N R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLQVTKVNVGEDEPVDIVCGASNCRLGIKVAVAKVGAVLP-GDFKIKKAKLRGQPSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D+ I+ELP DAPVG YL+L D ID+ LTPNR DC+ +RGIA ++ Sbjct: 120 CSFKELGLIDEHDGIIELPADAPVGEDYRKYLQLDDNSIDIDLTPNRGDCLSIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G L ++++ P S+E SI + L + C + +KGV P WM Sbjct: 180 -----GVLNRLDVTVPESNEVTASIEDTLSISLSAAEQCPRYLGRVIKGVDLTRPTPVWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VD+TNYV L+ G+P H FD + + VR A E++ LD Q Sbjct: 235 TEKLRRSGIRSIDPVVDVTNYVLLELGHPMHAFDLDSLEGNIDVRLAKPKEQLTLLDEQL 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L D +VIA + + ++AG+ GGK++G +++ ++ +E A + P I + G+ T Sbjct: 295 VELDEDTLVIADEKKALAMAGVYGGKNSGVTESSKNIFLESAFFAPDAILGKARRYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L++CGG A + A + P++ I + Sbjct: 355 DASHRYERGVDPQLQRTAMERATELLLAICGGEAGPVTEAVAEAFLPKRDGITLRACRLA 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G+ + ++ ILERLGF V + ++++V +PS+R D+ + DL+EE+ R+YG + I Sbjct: 415 KVLGVSIANDNVTEILERLGFDVSFDGEQWQVGIPSYRFDLSIEEDLIEEVARVYGYNSI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 ++ P P Q+ Q S + V + SR E + +SF+ + L L Sbjct: 475 QAAP-PAAQLRMTERKESQLSTHQLVD-AMVSRGYQEAITYSFVDPKHQALMFDETAALT 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS DMS+MR SL PGL+ A N R + A E + D + G+R Sbjct: 533 LPHPISVDMSSMRVSLWPGLVGAVAHNQKRQQSVLAFVETGLRFIPD-----ESAENGVR 587 Query: 593 KGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + + SGI SG+ S+ E R VD +D K D +++ + + RF + HP Sbjct: 588 QEAVISGIR-SGKAHSEHWSEGDRPVDFYDVKGDVEALLAQTGNAAAFRFVASQNPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I +E V G G HP GL+ FE+ L ++++ + K V Sbjct: 647 GQSAAIYRGSEKV-GDIGALHPKFDKALGLNQRTFVFELALSV--VTERPLPQAKPVSRY 703 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S ++RDLA +VD+ + AG L+ ++NV + + D+ +FDV+ G + EGK+S+A+ V Sbjct: 704 PS---IRRDLAVVVDKDLAAGELIAAMENVGVKQLVDLNLFDVYIGDGVAEGKQSLALSV 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +Q T + ++ LM + +E + + NA LR Sbjct: 761 TLQDSDKTLEEAEVTELMTKFIETLKSEFNATLR 794 >gi|119775087|ref|YP_927827.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella amazonensis SB2B] gi|119767587|gb|ABM00158.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella amazonensis SB2B] Length = 795 Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust. Identities = 268/817 (32%), Positives = 441/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S E + +T GLEV+ VD A S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAISREDLSHQITMAGLEVDGVDAVAAGFSGVFVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDTLLDIVCGAPNCRLGLKVAVATVGAVLP-GDFKIKKAKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP+DAP+G + +YL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYSELGIDIESDGIIELPLDAPIGTDIREYLDLNDAVIDVDLTSNRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L + + I S + +I I L + C + V+ V P WM+++ Sbjct: 180 --GVLNRAEVIEPSWTPAVATIGDAIDIQLSAPAACPRYLGRIVRNVNVKAPTPEWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV ++ G P H FD ++I + VR EK+ LD E + Sbjct: 238 LRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKIDGKIEVRLGKGDEKLTLLDGSEITV 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + + ++AG+ GG+ +G ++T D+L+E A + P+ I + LG+ TDS Sbjct: 298 PNDTLVIADNSKPLALAGVFGGEFSGVGESTQDILLECAFFAPLAIMGKARKLGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVKRLS 415 +RFERGVD + V+ L+L +CGG A + A++ + P R+I+ S++ ++ Sbjct: 358 HRFERGVDPELQHKVMDRATRLVLDICGGEAGTVVEAKSDEHLPKAREILLRRSKLDKIL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP D + IL RLGF+V +++V+ ++R D+ + DL+EE+ RIYG + I ++ Sbjct: 418 GHHVPDSDVVEILTRLGFAVTAGEGEWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNK 477 Query: 476 PLPLTQV----EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ + + ++SL++ R+ +L +R E V +SF+ + L G++ + Sbjct: 478 A-PMAHLRMSTHQEADISLKKVRS-----LLVARGFQEAVTYSFVDPKLQQLVHPGEQAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKYM 587 + NPIS++MS MR S+ GLL A G N R +FE V + + G Q+ M Sbjct: 532 ILPNPISSEMSAMRLSMFTGLLTAVGYNQARQQGRVRLFETGLRFVPDANAESGVRQQPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + G E WS +S + VD FD K D ++I VS F S Sbjct: 592 LGAVIAGLQNEEH----WSMES----KTVDFFDLKGDLEAIIGLTVSGSEFSFRRATHSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + + V+GY G HP++ FGL+ FE+ LD++ K + Sbjct: 644 LHPGQCAEILRN-DRVIGYIGAVHPSLEKPFGLNGKTIVFELELDAL-----LHAKLPEA 697 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +VD+ + A ++ +I+ V + + V +FDV+QGK + GKKS+A Sbjct: 698 QVISKFPANRRDIALVVDESVAAADVIKVIRKVGENQLVGVNLFDVYQGKGVEPGKKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I + +Q T + +I +D +V + + NA LR Sbjct: 758 IALTLQDNTRTLEEKEIAEAVDTVVSALKSEFNASLR 794 >gi|301156332|emb|CBW15803.1| phenylalanine tRNA synthetase, beta subunit [Haemophilus parainfluenzae T3T1] Length = 796 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 445/819 (54%), Gaps = 40/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSENWVREWVNPSISTEQLCDQITMLGLEVDGVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP+DAPVG L +YL+L D I++SLTPNR+DC+ + G+A ++ Sbjct: 120 CSFSELGIDVDADGIIELPLDAPVGTNLREYLDLDDKAIEISLTPNRADCLSIAGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P +++P +++ +L C + + VK V +P W Sbjct: 180 -----GVVNKQVVNQP-HFDAVPATISDKVQIELKAPEACPRYLLRVVKNVNVKAQSPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ GLRSI +VDITNYV L+ G P H FDAS+++ + VR A +GE+++ LD Sbjct: 234 LQEKLRRCGLRSIDPIVDITNYVLLELGQPMHAFDASKVAQPVQVRLANNGEELVLLDGT 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT-DVLVEVALWDPINIARSGKNLGI 352 L P+ +VIA ++AGI GG+ +G D TT DV++E A + P+ IA + G+ Sbjct: 294 TAKLQPNTLVIADQTGPLAMAGIFGGQASGVDAETTKDVILEAAFFAPLAIAGRARQYGL 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSE 410 TDS +RFERGVD ++ +L+L +CGG A +IC + Y P+ ++ + Sbjct: 354 HTDSSHRFERGVDFTLQRHAMERATALLLEICGGEAGEICEVVSEQYLPKVNEVTLRREK 413 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + E I ERLGF+V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 LDSLLGHHIETETVTEIFERLGFAVKYANDVWTVTSASWRFDIEIEEDLIEEVARIYGYN 473 Query: 471 QI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I + PL ++ + + L+ SR +K L E + +SF+ + L Sbjct: 474 SIPNNAPLAHLRMREHKEADLELSR---IKTALVDADYQEAITYSFVDPKVQTLLHPEIE 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPIS +MS MR SLL GLL A N +R +FE + D Q+ Sbjct: 531 ALVLPNPISVEMSAMRVSLLSGLLGAVLYNQNRQQNRVRLFETGLRFIPDANAEFGIRQE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 ++ AG+ G++ E W+ K+E VD FD K D S++ ++F + A Sbjct: 591 FVLAGVITGTAKSES----WTGKAEN----VDFFDLKGDLESILSLTEVGSRVKFVAKAH 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S HPG+S I+ + + G+ G HP I GL+ FE+ D+ I+ ++ + K Sbjct: 643 SALHPGQSASIELDGKEI-GFIGTIHPLIAQKLGLNGKAVVFEILWDA--IANRRVVQAK 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 ++ S +RDLA +V ++PAG ++ K + V +FDV+QG + G KS Sbjct: 700 EI---SKFPANRRDLALVVADNVPAGDIIEACKQAGGEKLTQVNLFDVYQGIGVASGHKS 756 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + IQ + T DD+I ++ ++ V ++ NA LR Sbjct: 757 LAISLTIQDNEKTLEDDEINAVISAVLNEVKQRFNAELR 795 >gi|222475346|ref|YP_002563763.1| phenylalanyl-tRNA synthetase beta chain (pheT) [Anaplasma marginale str. Florida] gi|222419484|gb|ACM49507.1| phenylalanyl-tRNA synthetase beta chain (pheT) [Anaplasma marginale str. Florida] Length = 787 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 278/821 (33%), Positives = 436/821 (53%), Gaps = 52/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+F SWL DHLDT+ S + D L+ +G+E E + + +PF + +V +V+ +P D Sbjct: 1 MRFAYSWLMDHLDTEWSASAVADELSRLGIEAELLHEGQDPAPFVVARVGAVKPHPSADK 60 Query: 60 ---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 C + D H +QVVCGA NVR G+L V A G+ +P + +RG++S G Sbjct: 61 LKVCEVF--DGADH--MQVVCGASNVREGMLSVLARCGAVMPNGGPTIVEAVLRGVKSHG 116 Query: 117 MMCSEKELMLSD---DSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 M+CS EL + + I++LP D VG D LS +I+V +TPNR DC+G+R Sbjct: 117 MLCSADELGVQGWRAQDSGILDLPSSDYEVG----DSFFLSGAVIEVGVTPNRGDCLGLR 172 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-CVKGVRNNV-A 230 GIA +LVAAG+G L+ PL + + + + ++ G M +K ++N + Sbjct: 173 GIARELVAAGVGALR------PLPVDDLEVFGRSPIEAEMRSAGVLMGRYIKSIKNTGDS 226 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W++ RL + G+++IS +VDI NYV L P HV+DA +I V A S AL Sbjct: 227 PRWIKDRLISAGVKTISCVVDIVNYVMLVLNRPMHVYDADKIQGGKLVVGASSNTDFHAL 286 Query: 291 DNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D ++Y LS DN+V+ G + IAG+IG +GC ++ ++ +E A +DP++IA S + Sbjct: 287 DGKKYTLSKDNLVVTDGAGVVHCIAGVIGSTLSGCTLDSENIFLESAWYDPVDIAMSARK 346 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L + TDS RFER D + L +I+ CGG ASD+ + +++ N Sbjct: 347 LKLSTDSSCRFERFTDPGCVKLGLDFASHMIVKYCGGVASDVVACGETPFSEGRVISFNP 406 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWR-QDVEEKADLVEEILRI 466 + V + +++ E+ LRIL LGF V + D+ +EVSVPSWR DV D+VEE+LR+ Sbjct: 407 DSVGVIGSVEIEREEILRILTALGFDVNADKDRQWEVSVPSWRLADVRSSFDVVEEVLRM 466 Query: 467 YGVDQIKSEP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +G D+++ +P +P + N + S ++ S + EVV WSF+S + G Sbjct: 467 HGYDKVQEQPVVPCIAGPNGCNYDEKLS------LIMLSAGLTEVVTWSFMSGAVAEKLG 520 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 +L + NP+S MR SLLP LL+ N AIFE+ VY E ++ Sbjct: 521 YSIEDLCVENPVSNKFDVMRPSLLPNLLQTAASNQACGCESVAIFELGEVYRF-LDESER 579 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESG 643 + G+R G + R D FDAK D L V+ + +D + F S Sbjct: 580 SI-CGVRSGDN--------VPRNPHGATRKFDFFDAKCDVLQVLTQ-LGIDGRLVEFRSC 629 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 S+ HP RS + +I+ GY GE HP+++ FF + + FE++L IP T Sbjct: 630 DRSYMHPARSADVYFR-DILCGYVGELHPDLIGFFEMRSAAACFEIFLSRIPNVDDNPTG 688 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + +VH PVKRD AF++DQ + + LV+++ + + +V+VFD + G ++ EGK Sbjct: 689 DEFLVH--KYQPVKRDFAFVLDQGVQSQALVDVVGCIPG-VAEVSVFDFYCGDNIPEGKV 745 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A+ V++ T + +I+ + +RI+ V +K LR+ Sbjct: 746 SIAVAVVMISKVGTMTESEIKDVSERIIALVAQKLGGELRA 786 >gi|53805112|ref|YP_113208.1| phenylalanyl-tRNA synthetase subunit beta [Methylococcus capsulatus str. Bath] gi|66773887|sp|Q60AY9|SYFB_METCA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|53758873|gb|AAU93164.1| phenylalanyl-tRNA synthetase, beta subunit [Methylococcus capsulatus str. Bath] Length = 791 Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust. Identities = 273/816 (33%), Positives = 423/816 (51%), Gaps = 39/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + +WL+ +++ V + LT GLEV+ + A S + ++L +P+ D Sbjct: 1 MRLSEAWLRQYVNPMVDTAGLVRQLTMAGLEVDGAEPAAADFSGVVVARILEAAPHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R+DTG + +Q+VCGA N R GL+ A G+ +P + + ++RG+ES GM+ Sbjct: 61 RLQICRVDTGGGEPLQIVCGAANARAGLVAPLAMEGAVLP-GPLKIKRSRLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L DD++ ++ELP DAPVG + DYL+L D I+++ LTPNR+DC+ V GIA ++ Sbjct: 120 CSAKELGLEDDASGLLELPADAPVGADIRDYLQLDDRILEIDLTPNRADCLSVEGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + +L + + + LD C + + G+ P WM++R Sbjct: 180 --ALINRLPFRGVDAGTVAVGSQRRLVVHLDAPEACPRYLGRVITGIDARAQTPRWMKER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ GLRS+ VD+TNYV L+ G P H FD R+S + VR+A GE + L+ +E L Sbjct: 238 LRRSGLRSLGPAVDVTNYVLLELGQPLHAFDLERLSGDVHVRQARDGELLRLLNGEEITL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGI+GG+ + T+DV +E A + P I + G+ TDS Sbjct: 298 SSDVLVIADEEKALALAGIMGGEQSAVGGATSDVFLECAFFAPALIMGKARRYGLATDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +RFERGVD ++ +L+L + GG A + A P + + + +L Sbjct: 358 HRFERGVDPSLQRRAIERATALLLEIAGGEAGPVTEAVREDLLPLRAPVRLREQRIGQLL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 G+++P ++ IL RLG SV + + V+ PS+R D+ +ADL+EEI R+YG D I + Sbjct: 418 GLNLPRDEVADILARLGMSVEEDEPGWTVTPPSFRFDIALEADLIEEIGRVYGYDAIPRR 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P + ++ L R VK +LA R EV+ +SF+S E +L Sbjct: 478 RPAVASAMQPASETVLGLDR---VKDLLADRGYQEVITYSFVSAEMQRRIDPEAEPEALL 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGIRK 593 NPISAD++ MR SL GLL +N+ R IFE + D Q+ AG+ Sbjct: 535 NPISADLAVMRISLWTGLLDCAQKNLSRQQDRVRIFETGLKFVRRDGSLEQRNTLAGLVL 594 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 GS + ++ E+ R VD FD K+D +++ S+RF HPG+ Sbjct: 595 GS--------ILDEQWGEKSRRVDFFDVKSDVEAILG-LTGKSSVRFRPAIHHALHPGQ- 644 Query: 654 GIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 SAEI++ G+ G HP I G P+ FE LD+ + Q+ + Sbjct: 645 -----SAEILIGDGGAGWLGMLHPQIERELGFEQPVFMFE--LDAGALLQR---DLPRFA 694 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 LS V+RDLA +V + +PA L+ + + L+ D +FDV+ G + GKKSVA+ Sbjct: 695 PLSRFPLVRRDLALVVARDLPAADLLEAVAASGGPLVRDTVLFDVYSGAGVEAGKKSVAL 754 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +Q ++T DD + +M RIV + A LR Sbjct: 755 GVTLQDAEETLTDDRVDEVMSRIVARLAADFGAKLR 790 >gi|56416978|ref|YP_154052.1| phenylalanyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] gi|66773855|sp|Q5PA83|SYFB_ANAMM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56388210|gb|AAV86797.1| phenylalanyl-tRNA synthetase beta chain [Anaplasma marginale str. St. Maries] Length = 787 Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust. Identities = 278/821 (33%), Positives = 435/821 (52%), Gaps = 52/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+F SWL DHLDT+ S + D L+ +G+E E + + +PF + +V +V+ +P D Sbjct: 1 MRFAYSWLMDHLDTEWSASAVADELSRLGIEAELLHEGQDPAPFVVARVGAVKPHPSADK 60 Query: 60 ---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 C + D H +QVVCGA NVR G+L V A G+ +P + +RG++S G Sbjct: 61 LKVCEVF--DGADH--MQVVCGASNVREGMLSVLARCGAVMPNGGPTIVEAVLRGVKSHG 116 Query: 117 MMCSEKELMLSD---DSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 M+CS EL + + I++LP D VG D LS +I+V +TPNR DC+G+R Sbjct: 117 MLCSADELGVQGWRAQDSGILDLPSSDYEVG----DSFFLSGAVIEVGVTPNRGDCLGLR 172 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-CVKGVRNNV-A 230 GIA +LVAAG+G L+ PL + + + ++ G M +K ++N + Sbjct: 173 GIARELVAAGVGALR------PLPVADLEVFGRSPIEAEMRSAGVLMGRYIKSIKNTGDS 226 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W++ RL + G+++IS +VDI NYV L P HV+DA +I V A S AL Sbjct: 227 PRWIKDRLISAGVKTISCVVDIVNYVMLVLNRPMHVYDADKIQGGKLVVGASSNTDFHAL 286 Query: 291 DNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D ++Y LS DN+V+ G + IAG+IG +GC ++ ++ +E A +DP++IA S + Sbjct: 287 DGKKYTLSKDNLVVTDGAGVVHCIAGVIGSALSGCTLDSENIFLESAWYDPVDIAMSARK 346 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L + TDS RFER D + L +I+ CGG ASD+ + +++ N Sbjct: 347 LKLSTDSSCRFERFTDPGCVKLGLDFASHMIVKYCGGVASDVVACGETPFSEGRVISFNP 406 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWR-QDVEEKADLVEEILRI 466 + V + +++ E+ LRIL LGF V + D+ +EVSVPSWR DV D+VEE+LR+ Sbjct: 407 DSVGVIGSVEIEREEILRILTALGFDVNADKDRQWEVSVPSWRLADVRSSFDVVEEVLRM 466 Query: 467 YGVDQIKSEP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +G D+++ +P +P + N + S ++ S + EVV WSF+S + G Sbjct: 467 HGYDKVQEQPVVPCIAGPNGCNYDEKLS------LIMLSAGLTEVVTWSFMSGAVAEKLG 520 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 +L + NP+S MR SLLP LL+ N AIFE+ VY E ++ Sbjct: 521 YSIEDLCVENPVSNKFDVMRPSLLPNLLQTAASNQACGCESVAIFELGEVYRF-LDESER 579 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESG 643 + G+R G + R D FDAK D L V+ + +D + F S Sbjct: 580 SI-CGVRSGDN--------VPRNPHGATRKFDFFDAKCDVLQVLTQ-LGIDGRLVEFRSC 629 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 S+ HP RS + +I+ GY GE HP+++ FF + + FE++L IP T Sbjct: 630 DRSYMHPARSADVYFR-DILCGYVGELHPDLIGFFEMRSAAACFEIFLSRIPNVDDNPTG 688 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + +VH PVKRD AF++DQ + + LV+++ + + +V+VFD + G ++ EGK Sbjct: 689 DEFLVH--KYQPVKRDFAFVLDQGVQSQALVDVVGCIPG-VAEVSVFDFYCGDNIPEGKV 745 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A+ V++ T + +I+ + +RI+ V +K LR+ Sbjct: 746 SIAVAVVMISKVGTMTESEIKDVSERIIALVAQKLGGELRA 786 >gi|256822927|ref|YP_003146890.1| phenylalanyl-tRNA synthetase subunit beta [Kangiella koreensis DSM 16069] gi|256796466|gb|ACV27122.1| phenylalanyl-tRNA synthetase, beta subunit [Kangiella koreensis DSM 16069] Length = 792 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 254/828 (30%), Positives = 447/828 (53%), Gaps = 60/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV---EKVDNREALSPFTIVKVLSVERNPD 57 MKF+ WL++ ++ ++S +++ + LT GLEV E + N+ S + ++++ E++PD Sbjct: 1 MKFSEKWLREWVNPEISTQELVEKLTMAGLEVDGFEYLGNK--FSGVVVGEIVAAEQHPD 58 Query: 58 LD----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 D C + + + +++Q++CGAPN R G+ A G+ +P + + K+RG+ Sbjct: 59 ADKLRVCTV-SVGSASDEDLQIICGAPNARAGIKVAVAMIGAVLP-GDFKIKKAKLRGVA 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS EL + +D I+EL AP+G + DY EL+D +I+V LTPNR DC+G+RG Sbjct: 117 SHGMLCSSTELEIGEDGDGIVELDSQAPLGQDIKDYFELNDHVIEVDLTPNRGDCLGIRG 176 Query: 174 IALDLVAAGLGKLKEINIS-------CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 IA ++ G L + ++ P S+++P++ L C + +KG+ Sbjct: 177 IAREV-----GVLTQTAVTEHQPKALTPEVSDTLPVK----LSAPQACPRYLGRIIKGIN 227 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 P+WM + ++ G+R+I +VD+TN+V L+ G+P H FD +I + VR A GE Sbjct: 228 PQAKTPDWMVKYIERSGVRAIDPVVDVTNFVLLELGHPMHAFDLKQIEGGIDVRMAKQGE 287 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K+ LD QE +L+ D ++IA + +IAG++GG+H+G + T ++ +E A +DPI IA Sbjct: 288 KLTLLDGQEVELTDDTLLIADHNKPLAIAGVMGGEHSGINSETDNIFLESAYFDPIAIAG 347 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RK 403 + G+ TD+ +R+ERGVD + ++ L+L + GG DI A + P R Sbjct: 348 RARQYGLHTDASHRYERGVDFELQRTAMERATELLLEIVGGQPGDIIEAVDHDAMPTKRH 407 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++R+ G + IL RLG + D ++V VPS+R D++ + L+EE+ Sbjct: 408 LRLRRQRIERVVGFPFADDQVEDILTRLGLKLTANADGWDVVVPSFRFDIDNEESLIEEL 467 Query: 464 LRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +R+YG +++ S +P + D+ + ++ R VL R EV+ +SF+ E + Sbjct: 468 VRVYGYNKLPSRKPQAEMAMFDQPENRVWKNDMR---DVLVKRGYQEVITYSFVEPEFQL 524 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 G L ++NPIS++M+ MRT+LLPGL++ N++R + IFE+ + N Sbjct: 525 QLHPGIEPLPLMNPISSEMAVMRTNLLPGLVQTAKFNINRQQSRIRIFELGLRFINSGDT 584 Query: 583 GQKY-----MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 Q+ + G+R S W+ E+ VD +D K D ++++ + S Sbjct: 585 LQQIPTIAGLVCGLRNKES--------WNTDGEK----VDFYDLKGDVEALLQ--ATNKS 630 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 FE+ HPG++ I V GY G+ HP + L F+ +D P+S Sbjct: 631 YDFETLHMDILHPGQAAEISVDGHAV-GYIGKIHPQVQQEIDLDMDAYVFQ--MDLAPLS 687 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGK 756 +++ + K LS ++RDLA +V+ + G L++ I+KN L+ D +FD+++G+ Sbjct: 688 ERQLPEFKP---LSKFPSIRRDLALVVEDSVNGGELLDFIVKNGGNLLTDAHIFDIYKGE 744 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 L GKKS+A+ + ++ T D +I +++++V + ++ A LR+ Sbjct: 745 HLEPGKKSIALAMTLRHPDKTLEDAEINAVVEKVVSGLAEQYGAALRN 792 >gi|330810588|ref|YP_004355050.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378696|gb|AEA70046.1| phenylalanyl-tRNA synthetase beta chain [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 792 Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 438/821 (53%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VL E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTPAAGDFSGVVVGEVLGTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + + + +MELP DAPVG + +YL L D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSQAELQIGEGNDGLMELPADAPVGQDIREYLGLDDASIEVDLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G L ++ P+ + S+P E++ ++ + C + ++ V + P W Sbjct: 179 -----GALYAAPVTRPVVA-SVPAVHDEVRSIEVLAPAACPRYLGRVIRNVDLSKPTPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Q Sbjct: 233 MVERLRRADVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L D +VIA R +IAG++GG+H+G T DV +E A +D I +A ++ G+ Sbjct: 293 EVTLRSDTLVIADHSRALAIAGVMGGEHSGVSTTTRDVFLESAFFDQIAVAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +R+ERGVD Q ++ L+L + GG A I + + P+ + + Sbjct: 353 TDASHRYERGVDWQLAREAMERATGLLLDITGGEAGPIIETVSEQHLPKIAPVTLRAQRI 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+++ + R+L LG ++ + ++ V VPS R D+ + DL+EE+ R+YG + Sbjct: 413 TQMLGMEMDPAEVERLLSALGLNISADGAGQWCVEVPSHRFDISLEVDLIEELARLYGYN 472 Query: 471 QI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ ++ P + E + +L ++R+L +R E + +SFI Q LF Sbjct: 473 RLPVRYPQARLAPQAKAEARSDLP-------ELRRLLVARGYQEAITYSFIDPRQFELFN 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG 583 G L + NPIS DM+ MR+SL PGL+K+ N++R +FE + V + D + Sbjct: 526 PGVEPLLLANPISNDMAAMRSSLWPGLVKSLQHNLNRQQDRVRLFESGLRFVGQLDGLK- 584 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W+ + VD FD KAD +V+ +LD+ F G Sbjct: 585 QEPMLAGVVCGSRLPEG----WAQGRD----VVDFFDVKADVEAVLGFAGALDAFTFVPG 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I+ V GY G HP + GL P+ FE+ L + + K Sbjct: 637 KHPALHPGQTARIERDGREV-GYVGAIHPELSKTLGLDRPVFVFELVLAEVALG-----K 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA + D+ + + ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 MPKFQELSRFPEVRRDLALLADRDVASSAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ + NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNTATQNILTSLETRLNATLR 791 >gi|269958609|ref|YP_003328396.1| phenylalanyl-tRNA synthetase beta chain [Anaplasma centrale str. Israel] gi|269848438|gb|ACZ49082.1| phenylalanyl-tRNA synthetase beta chain [Anaplasma centrale str. Israel] Length = 793 Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust. Identities = 284/823 (34%), Positives = 431/823 (52%), Gaps = 50/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+F SWL DHLDT+ S + D L+ +G+E E + +PF + +V +V+ +P D Sbjct: 1 MRFAYSWLLDHLDTEWSAGAVADELSRLGIEAELFREDRSPAPFVVARVDAVKPHPSADK 60 Query: 60 ---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 C + D H +QVVCGA NVR G+L V A G+ +P + + +RG+ S G Sbjct: 61 LRVCEVF--DGAGH--VQVVCGASNVREGMLAVLARCGAVVPNGGLTIAEVVLRGVTSRG 116 Query: 117 MMCSEKELMLSDDS----ASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 M+CS EL + S + I++LP D VG D L +I+V +TPNR DC+G+ Sbjct: 117 MLCSADELGVHQGSKLQDSGILDLPSSDYAVG----DSFFLPGAVIEVGVTPNRGDCLGL 172 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RGIA +LVAAG+G LK ++ + S P+E ++ + + G + VK N+ P Sbjct: 173 RGIARELVAAGVGTLKPLSAVDLKTFGSSPIEA--EMRSTGVLMGRYIRSVKNTENS--P 228 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++ RL + G+R+IS ++DI NYV L P HV+DA +I L V + AL Sbjct: 229 RWIKDRLVSAGIRTISCIIDIVNYVMLVLNRPMHVYDADKIQGGKLIVGASPLNADFCAL 288 Query: 291 DNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D ++Y LS DN+V+ G + IAG++G + C + +V +E A +DPI+IARS ++ Sbjct: 289 DGKKYTLSNDNLVVTDGAGAVHCIAGVMGSALSECTLESGNVFLESAWYDPIDIARSARS 348 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-KPRKIVFMN 408 L + TDS +RFER D + L +I+ CGG ASD+ + + R I F Sbjct: 349 LKLSTDSSFRFERFTDPGCIRLGLDLAAHMIVKYCGGVASDVVMCGEAPLPEGRVISFHP 408 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWR-QDVEEKADLVEEIL 464 V + +D+ + L IL LGF V + DK +EV+VPSWR DV D+VEE+L Sbjct: 409 DSVSIVGSVDIEHGEILGILTALGFGV--DADKGCPWEVTVPSWRLADVRSSRDIVEEVL 466 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK--RVLASRAMMEVVNWSFISKEQSV 522 R++G D+++ +P+ D NL SR K V+ S + EVV WSF+S + Sbjct: 467 RMHGYDKVQEQPV----TPDAANLRWCGSRNDGDKLCLVMLSAGLTEVVTWSFMSSAVAE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 FG +L I NP+S MR +LLP LL+ N AIFE+ VY Sbjct: 523 KFGYIIEDLHIENPVSNKFDVMRPTLLPNLLQTVASNQACGCESVAIFELGEVYCGLLDS 582 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 ++ + G+R SG R D FD K D L V+ S+ F Sbjct: 583 NERSV-CGVR--------SGDCAPRNPHVSTRKFDFFDVKCDVLQVLTQLGADSRSVEFR 633 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + ++ HP RS I +++ GY GE HP++ DFF L FEV++ +P Sbjct: 634 ECSRNYMHPARSADIYFR-DVLCGYVGELHPDLADFFELRFAAVCFEVFVSRVPTISACS 692 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEG 761 + + VH VKRD AF++D+ I A LV+++ +V +++V+VFDV+ G ++ E Sbjct: 693 AEDEFSVH--KYQTVKRDFAFVLDKGIRAKALVDVVSSVPN-VEEVSVFDVYCGNNVPED 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K S+A+ V++ T + +I+ + +RI+ V +K LR+ Sbjct: 750 KVSIAVAVVMMSKMGTMTELEIKDVSERIISLVAQKLGGELRA 792 >gi|325578437|ref|ZP_08148572.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] gi|325160173|gb|EGC72302.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus parainfluenzae ATCC 33392] Length = 796 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 444/819 (54%), Gaps = 40/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSENWVREWVNPSISTEQLCDQITMLGLEVDGVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP+DAPVG L +YL+L D I++SLTPNR+DC+ + G+A ++ Sbjct: 120 CSFSELGIDVDADGIIELPLDAPVGTNLREYLDLDDKAIEISLTPNRADCLSIAGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P +++P +++ +L C + + VK V +P W Sbjct: 180 -----GVVNKQVVNQP-HFDAVPATISDKVQIELKAPEACPRYLLRVVKNVNVKAQSPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ G+RSI +VDITNYV L+ G P H FDAS++S + VR A +GE+++ LD Sbjct: 234 LQEKLRRCGIRSIDPIVDITNYVLLELGQPMHAFDASKVSQPVQVRLANNGEELVLLDGT 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT-DVLVEVALWDPINIARSGKNLGI 352 L + +VIA ++AGI GG+ +G D TT DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLVIADQTGPLAMAGIFGGQASGVDAETTKDVILEAAFFAPLAIAGRARQYGL 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSE 410 TDS +RFERGVD ++ +L+L +CGG A +IC + Y P+ ++ + Sbjct: 354 HTDSSHRFERGVDFTLQRHAMERATALLLEICGGEAGEICEVVSEQYLPKVNEVTLRREK 413 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + E I ERLGF+V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 LDSLLGHHIETETVTEIFERLGFAVKYANDVWTVTSASWRFDIEIEEDLIEEVARIYGYN 473 Query: 471 QI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I + PL ++ + + L+ SR +K L E + +SF+ + L Sbjct: 474 SIPNNAPLAHLRMREHKEADLELSR---IKTALVDADYQEAITYSFVDPKVQTLLHPEIE 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPIS +MS MR SLL GLL A N +R +FE + D Q+ Sbjct: 531 ALVLPNPISVEMSAMRVSLLSGLLGAVLYNQNRQQNRVRLFETGLRFVPDANAEFGIRQE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 ++ AG+ G++ E W+ K+E VD FD K D S++ ++F + A Sbjct: 591 FVLAGVITGTAKSES----WTGKAEN----VDFFDLKGDLESILSLTEVGSRVKFVAKAH 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S HPG+S I+ + + G+ G HP I GL+ FE+ D+ I+ ++ + K Sbjct: 643 SALHPGQSASIELDGKEI-GFIGTIHPLIAQKLGLNGKAVVFEILWDA--IANRRVVQAK 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 ++ S +RDLA IV ++PAG ++ K + V +FDV+QG + G KS Sbjct: 700 EI---SKFPANRRDLALIVADNVPAGDIIEACKQAGGEKLTQVNLFDVYQGIGVASGHKS 756 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + IQ + T DD+I ++ ++ V ++ NA LR Sbjct: 757 LAISLTIQDNEKTLEDDEINAVISAVLNEVKQRFNAELR 795 >gi|123442194|ref|YP_001006175.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089155|emb|CAL11997.1| phenylalanyl-tRNA synthetase beta chain [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 795 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 433/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALAHQITMAGLEVDGVEAVAGEFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP+DAP+G L DYL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPVDAPIGANLRDYLNLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L E ++ SS +S+P+ + D C + VKG+ A P WMR Sbjct: 180 AVLNKLPLTEPEMTPVASSLKDSLPIRV----DAPQACPRYLGRVVKGINVKTATPLWMR 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN+V L+ G P H FD RI + VR+A GE + LD + Sbjct: 236 EKLRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRIDGGIIVRQATEGEDLTLLDGTKV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 LS D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD Sbjct: 296 KLSADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVK 412 + +R+ERGVD + ++ L+L +CGG A D+ A N+ K I +++ Sbjct: 356 ASHRYERGVDPELQYKAIERATRLLLDICGGEAGPVIDVTSAENLP-KRATITLHRAKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G VP E IL RLG V + ++ PSWR D+E + DLVEE+ RIYG D I Sbjct: 415 RLIGYPVPAEQVSDILRRLGCQVTEQGSDWQAIAPSWRFDMEIEEDLVEEVARIYGYDNI 474 Query: 473 KSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + P+ V K NLSL++ VK L R E + +SF+ + L Q Sbjct: 475 PNVPIKANLVMTKHREANLSLKR-----VKTALVDRGYQEAITYSFVDPKVQALLHPQQD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QK 585 L + +PIS +MS MR SLL GLL A N +R + +FE + V +N G Q Sbjct: 530 ALILPSPISIEMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNKADLGVRQD 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M A + +G + + + + +D +D K D +++E L ++F + A Sbjct: 590 VMLAAVI--------TGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I S E + G+ G HP + L+ FEV + + Sbjct: 642 PALHPGQSAAIYLSGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKL-----ADRAVP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 + +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS Sbjct: 696 QASEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI +++Q T +++I + R VE + ++ A LR Sbjct: 756 LAISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|152979084|ref|YP_001344713.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus succinogenes 130Z] gi|150840807|gb|ABR74778.1| phenylalanyl-tRNA synthetase, beta subunit [Actinobacillus succinogenes 130Z] Length = 795 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 267/822 (32%), Positives = 445/822 (54%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +W+++ ++ V+ +++CD +T +GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFSENWVREWVNPAVNTDELCDQITMLGLEVDGVEPVAGEFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACAMDGAVLP-GNFNIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D + IMELP DAP+G L +YL+L+D +++SLTPNR+DC+ + G+A ++ Sbjct: 120 CSFSELGMSEDHSGIMELPQDAPIGRDLREYLDLNDKEVEISLTPNRADCLSIAGVAREI 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G + ++ P+ + +IP +I D+ C + + VK V A P WM Sbjct: 180 -----GVVNRATVTEPVITNVAPTIPDKIAIDVSAPEACPRYLLRSVKNVNVKAATPMWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNY+ L+ G P H FDA+ ++ + VR A GEK++ LD Sbjct: 235 KEKLRRCGIRSIDPVVDITNYILLELGQPMHAFDAATVAQPVQVRMAKEGEKLVLLDGNT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA ++AGI GG +G + +T D+++E A + P+ I + G+ T Sbjct: 295 ATLQSNTLVIADQNGPLAMAGIFGGAASGVNADTKDIILESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L++CGG A +IC A + + P +++ S++ Sbjct: 355 DASHRFERGVDFQLQHKAMERATALLLAICGGEAGEICEAVSEQHLPKLKEVQLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E I +RLG SV E D + V+ SWR D+E + DL+EE+ RIYG + I Sbjct: 415 ALLGHHIETETVTDIFQRLGLSVRYENDVWTVTSASWRFDIEIEEDLIEEVARIYGYNNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL + + + L+ R +K L S E + +SF+ + + + L Sbjct: 475 PNNAPLAHLTMREHKESDLEIDR---IKTALVSADFHEAITYSFVDPKIQSMLHPAVKPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS +MS MR SLL GLL A N +R +FE + D Q+++ Sbjct: 532 ILPNPISGEMSAMRVSLLTGLLGAVLYNQNRQQTRVRLFETGLRFIPDASAEFGVRQEFV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL----DSLRFESG 643 A + G+ E W+ KSE D +D K IE +SL D ++F + Sbjct: 592 FAAVMTGAKYNEH----WTTKSES----ADFYDLKG----YIENLLSLTAVGDRVKFVAK 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A +HPG+S ++ E + GY G+ HP+I GL+ E+ ++ + R Sbjct: 640 ALPAFHPGQSAVLVLDGEEI-GYIGQIHPSIAQKLGLNGKTFAAEILVEKV-----SRRN 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S +RDLA +V ++PA +++ + V ++L+ V +FDV+QG + EG Sbjct: 694 VAVAKEISKFPANRRDLALVVADNVPASDIIDACRAVGGEKLV-AVNLFDVYQGAGVAEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + IQ + T ++DI ++ ++ + ++ NA LR Sbjct: 753 MKSLAISLTIQDTEKTLAEEDINAVISAVLAELKQRFNATLR 794 >gi|78486003|ref|YP_391928.1| phenylalanyl-tRNA synthetase, beta subunit [Thiomicrospira crunogena XCL-2] gi|91208145|sp|Q31F19|SYFB_THICR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78364289|gb|ABB42254.1| phenylalanyl-tRNA synthetase beta subunit [Thiomicrospira crunogena XCL-2] Length = 793 Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust. Identities = 267/820 (32%), Positives = 435/820 (53%), Gaps = 44/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + SWL++ ++ + + + L+ GLEV+ ++ A + + KV+SVE++PD D Sbjct: 1 MKVSESWLREWVNPEWDTNTLAEELSLAGLEVDGIEPVAPAFTNVVVAKVISVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA NV G+ A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLNVTQVDIGADEPVQIVCGAKNVVAGMKACCATVGAVLP-GDFKIKKAKLRGVPSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 C EL L DD + LP DAPVG L +YL+L D +IDV LTPNR+DC+ + G+A D Sbjct: 120 CGANELGLPDDGVDGLHVLPADAPVGTDLREYLDLDDQVIDVDLTPNRADCLSIAGVARD 179 Query: 178 LVAAGLGKLKEI--NISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 + A G K+ N++ S S+S+ ++ D+ C + C V G P Sbjct: 180 VAAIGNVPFKQPFDNVTVDKSGDCSQSV------NVVDAHGCPKYLGCLVDGYDTTAETP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM+QR++ GL + VDITNYV L+ G P H FDA ++ + VR A EK++ LD Sbjct: 234 SWMKQRIERAGLSPKNLTVDITNYVMLELGQPMHAFDADKLQGDIQVRMAHPNEKLMTLD 293 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L D +VIA D ++AGI+GG ++ D TT + E A + P++I + G Sbjct: 294 EKELTLKADTLVIADDNGPVALAGIMGGLNSSVSDTTTRLFFECAHFAPLSIIGKARQYG 353 Query: 352 IITDSRYRFERGVDLQGMIP--VLKHIVSLILSLCGGTASDICIARN--ITYKPRKIVFM 407 + TDS +RFERGVD +P L+ + L + GG S++ N ++P+ I Sbjct: 354 LHTDSSHRFERGVD--AFLPEKALERALQLFTEIAGGRVSNLVAVINELNLHQPKAIQLR 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + +L G+++ D I +RL F V + ++ PS+R D+E +ADL+EE+ R++ Sbjct: 412 PERIVKLLGVEIADNDVEAIFKRLNFKVEQNASGWALTAPSYRFDMEIEADLIEEVGRVF 471 Query: 468 GVDQIKSEPLPLTQVEDKRNL-SLQQSRTR--YVKRVLASRAMMEVVNWSFISKEQSVLF 524 G + LP T+V+ L +L +S V++ L +R EVV +SF+ + Sbjct: 472 GYNN-----LPETEVQAPMRLPTLPESEQELYLVRKALVNRGFHEVVTYSFVEETLQQKM 526 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L + NPIS DM MRT+L PGLL+ N R IFE V+ E Q Sbjct: 527 MPSIPYLCLQNPISDDMKAMRTTLFPGLLQTISYNQKRQQNRIRIFESGLVFTRYNEETQ 586 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + G G+ + + WS ++ R VD +D K D +++ D +RFE Sbjct: 587 QTPVIG---GAIVGDLNPANWSGEN----RPVDFYDLKGDVETLLAMSHVQDKVRFEPTE 639 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + +HPG+S + + + V G G+ HP ++ G+S +VYL + ++ TK Sbjct: 640 FAIFHPGQSAALILNGQTV-GLMGQLHPGLVKSAGVSG-----KVYLFQMDLATIMETKV 693 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKK 763 +S V+RDLAF+VD +P L++ I +V ++ V +FD++QG+ + E +K Sbjct: 694 PAAKPISKFPEVQRDLAFVVDAELPVQKLLDAIDHVQSDILKAVEIFDIYQGEGIEETQK 753 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + IQ T +D+++ L+++++ ++ NA LR Sbjct: 754 SIALTLKIQHQDRTLQDEEVDQLIEQVILKAKEQVNAELR 793 >gi|327481046|gb|AEA84356.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas stutzeri DSM 4166] Length = 792 Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 437/818 (53%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS E++ L+ +GLEV+ V + S + +VL ++PD D Sbjct: 1 MKFSEQWLRSWVNPQVSREELVARLSMVGLEVDAVTPVAGSFSGVVVGEVLETAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGQ-ETFQVVCGAPNVRPGLKIPFAMIGAQLP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + D + +MEL DAPVG L +YL L D I++ LTPNR DC+ + G+A ++ Sbjct: 119 CSETELQVGGDDSGLMELAADAPVGTDLREYLGLDDVSIEIGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A +++ E+ ++ + P+E+ C + + V P W+ Sbjct: 179 GAIYGAEVRPVEVGVASVAHEDVRPVEVL----APKACPRYLGRVIHNVDLTRPTPLWIV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A+VD+TNYV L+ G P H FD + + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDAVVDVTNYVMLELGQPLHAFDLDEVKGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D ++IA R +IAG++GG+H+G T + +E A +D I +A ++ G+ TD Sbjct: 295 SLRSDTLIIADHERPLAIAGVMGGEHSGVSAPTRSIFLESAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ SL+L + GG A I + P + + + Sbjct: 355 ASHRYERGVDSQLPRQAMERATSLLLDIVGGKAGPIVEVVSERDLPNIAPVTLRAERITQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+++ + +R+L LG V+GE + +++V VPS R D+ + DL+EE+ R+YG D++ Sbjct: 415 MLGLELDGTEVVRLLTSLGLVVVGEGEGRWQVFVPSHRFDISLEIDLIEELGRLYGYDRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E + L L ++R+L +R E + +SFI + LF Sbjct: 475 PVRYPQARLAPEAKPEARAELPL-------LRRLLVARGYQEAITYSFIDPKLFELFSPD 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 + LE+ NPISADM+ MR SL PGL+KA N++R + +FE + P Q+ Sbjct: 528 MKPLELANPISADMAAMRASLWPGLVKALQYNLNRQQSRVRLFEAGLRFVGQLPALEQEA 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ GS EG W++ E VD FD KAD +++ + + RF G Sbjct: 588 MLAGVVTGSREPEG----WANAREA----VDFFDVKADVEALLAFAGNGSAYRFVPGEHP 639 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I+ +V G+ G HP + G+ VYL + +S+ + + Sbjct: 640 ALHPGQTARIERDGRLV-GFVGSLHPELAGMLGIDQ-----SVYLFELKLSEIADGRMPQ 693 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LS V+RDLA +V++ + A +++ I+ + D+ +FDV+QGK + KSV Sbjct: 694 FSELSRFPEVRRDLAVLVNRDVAAQAILDCIRGGAGENLTDLKLFDVYQGKGIDPLSKSV 753 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ + Q T DD++ +M +I+ ++ ++ NA LR Sbjct: 754 AVGLTWQHPSRTLNDDEVNDVMQKILTSLEERFNATLR 791 >gi|256846670|ref|ZP_05552126.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_36A2] gi|256717890|gb|EEU31447.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 3_1_36A2] Length = 798 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 277/816 (33%), Positives = 447/816 (54%), Gaps = 30/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESIDEIANALTMIGQEVEAIDIQGKDLDNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ + +Q++CGA N ++ V A G+ +P N + KIR IES GM+ Sbjct: 61 RLTLLKVDVGEEEPLQIICGAKNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDIESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +S I+ LP DAP+G +Y+ L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGFAKESEGIIILPEDAPIGKEYREYMGLNDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI +K D++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYSRKVKYPMIEMTETIESINTMVKVDIEDKDRCKRYMGRVIKNVKVQESPAWLKSRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A EKI LD + L Sbjct: 240 RAMGLNPINNIVDITNFVMFEYNQPMHAFDLDKLEGNITIRAAKENEKITTLDGVDRVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +IAGIIGG++ DD+T +V VEVA + P NI ++ + LGI TDS Y Sbjct: 300 NKELVIADDEKAIAIAGIIGGQNTQIDDDTKNVFVEVAYFTPENIRKTSRELGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + GG I + + R + +N E + + G Sbjct: 360 RNERGMDVENLNVVMARAVSLIAEVAGGDILSEVIDKYVEKPKRAEITLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ ++ +IL L + +G+ + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFDNIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E K N++ + SR V+ +L + EV+N+SFI K LF G +EI Sbjct: 479 -MPIMSIESGKENINFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGDEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++N E ++ Sbjct: 536 NPLSEDMAIMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKNLGAEKDGLAVENLK-- 593 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 GI SGR LW ++S+ F DL L + +++ S +HP Sbjct: 594 -IGIILSGREEKNLW-NQSKADYNFYDL----KGYLEFLLERLNVTKYSLTRLKNSNFHP 647 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK E V+G FGE HPN++++FG+ F E+ L + K K K Sbjct: 648 GVSAEIKI-GEDVIGVFGELHPNLINYFGIKREKLFFAELNLTKLL----KYIKIKVNYE 702 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ I G ++ IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 703 SISKYPEVLRDLAITLDRDILVGDMIKEIKKKVALIEKIDIFDVYSGDKIDKDKKSVAMS 762 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M+ I+E + K N +R Sbjct: 763 IVLRDKNRTLTDEDIDKAMNTILELIKDKYNGEIRK 798 >gi|330951871|gb|EGH52131.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae Cit 7] Length = 792 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 277/824 (33%), Positives = 432/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A I + Y P + Sbjct: 350 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPITEVVSKQYLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D K+ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLGLAVTAEADGKWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFTPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|237738557|ref|ZP_04569038.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] gi|229424040|gb|EEO39087.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 2_1_31] Length = 799 Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust. Identities = 275/816 (33%), Positives = 443/816 (54%), Gaps = 29/816 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESVDEIANALTMIGQEVEAIDIQGKDLGNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G+ + +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGEGEPLQIICGATNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESYGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ES+ IK +++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPVIEMAETIESVNTVIKVNIEDKDRCKRYMGRVIKNVKIKESPEWLKTRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD E L Sbjct: 240 RAMGLNPINNVVDITNFVMFEYNQPMHAFDLDKVEGNITIRAAKENEEITTLDGVERVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +I G+IGG++ DD+T ++ VEVA + P NI R ++LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIGGVIGGQNTQIDDDTKNIFVEVAYFTPENIRRESRDLGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSLI + G I + + R + +N E + + G Sbjct: 360 RNERGMDVENLPVVMNRAVSLIAEVAEGEVLSEVIDKYVEKPKRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + E+ +IL L + D + + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 TLTYEEVGKILTHLDIELKPLGDGTTLLIPPSYRADLTRPADIYEEVIRMYGFDNIEAK- 478 Query: 477 LPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 +P+ +E K N + + SR V+ +L + EV+N+SFI K LF G+ +EI N Sbjct: 479 MPVMSIESGKENTNFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGEEVIEIKN 536 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--DTPEGQKYMAAGIRK 593 P+S DM+ MR +LL L+ N++R D +FE+S ++ + P G I Sbjct: 537 PLSEDMAIMRPTLLYSLIANVRDNINRNQTDLKLFEISKTFKKLGEGPNGLAIEDLKIAL 596 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 SG E LW ++S+ F DL + + L+V + SL L +HP Sbjct: 597 ILSGRE-EKNLW-NQSKSDYSFYDLKGYLEFLLERLNVTK--YSLTRLTNNKN----FHP 648 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKVVH 709 G S IK E V+G GE HPN++++FG+ F E+ L S+ K K K Sbjct: 649 GASAEIKI-GEDVIGVLGELHPNLVNYFGIKREKVFFAELNLTSLL----KYIKIKVNYE 703 Query: 710 LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +P V RDLA +D+ + G +V IK LI+ + +FDV+ G + + KKSVA+ Sbjct: 704 TISKYPEVLRDLAITLDRSVLVGEMVKEIKKKVNLIEKIDIFDVYSGDKIDKDKKSVAMS 763 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T D+DI M I+E + K N +R Sbjct: 764 IVLRDKNRTLTDEDIDKAMTAILELIKDKYNGEIRK 799 >gi|284006262|emb|CBA71498.1| phenylalanyl-tRNA synthetase beta chain [Arsenophonus nasoniae] Length = 795 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 264/814 (32%), Positives = 430/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ +S E + + +T GLE++ V +V +++ ++P+ D Sbjct: 1 MKLSEFWLREWVNPAISSEALSEQMTMAGLEIDDVKPVAGQFQGVLVGEIVECVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G Q + +VCGAPN R GL A G+ +P+N + K+RG S GM+ Sbjct: 61 KLRLTKVNIGAEQLLNIVCGAPNCRQGLKVAVATIGAVLPDN-FKIKATKLRGELSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D A I+ELP DAP+G + +YL+L D I +VSLTPNR+DC+ + GIA D+ Sbjct: 120 CSYSELAIVNDHAGIIELPHDAPIGIDIRNYLQLDDHIFEVSLTPNRADCLSILGIARDI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 A L I +++ I+ ++ C F +KG+ + P WM+++ Sbjct: 180 AAINNLALNTKKIEPVKGTDASVFPIR--VEAPMACPRFLGRVIKGIDITASTPIWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R+I +VDITN+V L+ G P H +D R++ + VR A E ++ LD+ E + Sbjct: 238 LRRGGIRAIDPVVDITNFVLLELGQPLHAYDLDRLNGAIIVRMAKQDETLVLLDDSEVTM 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + IAGI GGKH+ + NTT++L+E A +DP+ IA +N G+ T++ Sbjct: 298 KQDTLVIADEKGALGIAGIFGGKHSSVNQNTTNILLESAFFDPLTIAGRARNYGLHTEAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +RFERGVD Q ++ LIL +CGG A +I + T P+ KI ++ RL Sbjct: 358 HRFERGVDPQLQYKAMERATQLILEICGGDAGNIIDVSHQTSLPKGAKITLTRLKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P + +ILERLG VIG+ D ++V PSWR D++ + DL+EE+ R+YG + I + Sbjct: 418 GHSIPDINVTQILERLGCQVIGKQDSWQVVAPSWRFDMQIEEDLIEEVARVYGYNNIPNV 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PL V R S+ + VK +L R E + +SF+ + L + + + Sbjct: 478 PLRADLVMTPRCESVLP--LKRVKTLLIDRGYNEAITYSFVDPKIQQLLHPDSDAMILPD 535 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----QKYMAAG 590 PIS DMS MR SLLPGLL N +R +FE + D P Q+ M AG Sbjct: 536 PISTDMSAMRLSLLPGLLMTVIYNQNRQQNRIRLFETGLRFLPD-PSAEHGIRQELMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ + + + R VD FD K D +++E LD++ +++ + HP Sbjct: 595 VITGNR--------YEEHWLQEKRAVDFFDIKGDVEAILELTGKLDNIIYKAHSNPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + + GY G HP + + L+ FE+ D++ K + Sbjct: 647 GQSAGIYLNNNYI-GYVGVIHPELENKLDLNGRTLVFELLWDTV-----AERVIPKANMI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V + + ++ K + I + +FDV+ GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVPEEVATADVLAECKKIGINHIVGINLFDVYCGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I +D+ V + ++ A LR Sbjct: 761 ILQDTNRTLEEEEIAATVDKCVAALKRRFQASLR 794 >gi|260772975|ref|ZP_05881891.1| phenylalanyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] gi|260612114|gb|EEX37317.1| phenylalanyl-tRNA synthetase beta chain [Vibrio metschnikovii CIP 69.14] Length = 795 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 274/815 (33%), Positives = 429/815 (52%), Gaps = 33/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS +++ +T GLEV+ V + + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDVLPVAGVFNGVKVGQVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRITKVDVGEDELLDIVCGAANCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL DAP+G ++L L+D IDV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDIESDGIMELAQDAPIGCDFREFLGLNDVTIDVDLTANRADCFSLRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L +L I S + SI + D+ + C + VK V N A P WM+++ Sbjct: 180 --GVLNRLDIIEPSVAPVAASINDSLTIDIQAPAACPRYLGRIVKNVNVNAATPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L++G P H FD ++I + VR A EK+ LD E L Sbjct: 238 LRRCGIRSIDPIVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDGTEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +PD ++IA + +IAG+ GG+H+G +T DVL+E A + P +I + G+ TDS Sbjct: 298 NPDTLLIADHNKPLAIAGVFGGEHSGVSSSTQDVLLESAFFAPDHIRGRARRYGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVKRLS 415 RFERGVD + L+ L++ +CGG A+ I A++ + P ++ + + L Sbjct: 358 MRFERGVDYELQQAALERATQLLIDICGGQAAPIVAAQSDQHLPSANQVTLRRTTLDNLL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + D + IL+RLG V ++ + P+WR D+ + DLVEEI RIYG D I ++ Sbjct: 418 GHTIADADVVEILQRLGMQVETTSQGWQATAPTWRFDIAIEQDLVEEIGRIYGYDNIPNQ 477 Query: 476 -PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P + + L R V+ +L R E + +SF+ EQ L L + Sbjct: 478 APQAALNMNAHKEARLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPNIEPLILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPISADMS MR SL+ GLL N R +FE + + + G Q+ M AG Sbjct: 535 NPISADMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEQGLRFIPDQAAENGMRQEPMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ G E W+ ++ VD FD K D ++++ + + +F + HP Sbjct: 595 VIAGTRGDEH----WNMETAS----VDFFDLKGDVEAILDLTANGLAYQFTATQHPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT-KKVVH 709 G++ I + + G G HP + FGL+ FE+ +I TK + V Sbjct: 647 GQAAAIVLDGKEI-GVIGTVHPELERKFGLNGRTIVFEIEWSAI------NTKVIPEAVA 699 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS +RD+A +VDQ++ +G +V ++ L+ D +FDV+ GK + EGKKS+AI Sbjct: 700 LSKFPANRRDIALVVDQNVASGDIVATCQSAGGSLLRDAKLFDVYVGKGVEEGKKSLAIA 759 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q + T D DI ++ IV+ V ++ +A LR Sbjct: 760 LILQSAERTLEDADITAAVNNIVQAVAEQYSATLR 794 >gi|118580718|ref|YP_901968.1| phenylalanyl-tRNA synthetase subunit beta [Pelobacter propionicus DSM 2379] gi|118503428|gb|ABK99910.1| phenylalanyl-tRNA synthetase beta subunit [Pelobacter propionicus DSM 2379] Length = 814 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 280/824 (33%), Positives = 449/824 (54%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D D++ E++ D LT +GLEVE ++ + + +V S E++P+ D Sbjct: 14 MNVTYNWLKEFVDFDLTPEQLADMLTMLGLEVEGMNTLGSGMDDVVVARVESREQHPNAD 73 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++++G + + VVCGA N G A G+ +P + KIRG ES GM+ Sbjct: 74 KLSLCKVNSGS-ELLDVVCGAQNFAAGDTVALARIGAVLP-GEFKIKKSKIRGQESFGML 131 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+++S+ IM LP +G L L L D + ++ LTPNR+DC+ GIA + Sbjct: 132 CSEKELGLAEESSGIMILPPSLELGQPLFQALGLKDTLYEIGLTPNRADCLSAIGIARE- 190 Query: 179 VAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 +AA LG L +++ +S+ I ++D LC +A + G R +P+W+ +R Sbjct: 191 IAAKLGTTLTTPSVAIDEGDDSVENRISVTVEDGDLCPRYAARHISGCRIAPSPDWLVKR 250 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L AVG+RSI+ +VD+TN V ++ G P H FD +++ + VRRA GE LD QE Sbjct: 251 LSAVGIRSINNVVDVTNLVMMELGQPLHAFDCDQLAGQRIVVRRAAQGELFTTLDGQERT 310 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +++VI R ++AG++GG ++ TT VL+E A + P +I + K LG+ T+S Sbjct: 311 LTCNDLVICDAERPVALAGVMGGLNSEISPETTTVLLESACFKPASIRTTSKRLGLHTES 370 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMNSEVK 412 +RFERG+D++G+ L SLI L GGT S D+ R +P I Sbjct: 371 SHRFERGIDVEGVSFALDRAASLIACLAGGTVSKGALDVYPGR---VEPVAITLRPERAN 427 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L GI +P E+ +RIL L FSV D EV PS+R D+E + DLVEEI R+ G D+ Sbjct: 428 ALIGISLPTEEIVRILTNLRFSVRTLADGNLEVLAPSYRVDIEREIDLVEEIARLNGFDR 487 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI---SKEQSVLFGGGQ 528 I + +PL +V R +L QS R V+ L S + E++N+SF + ++ +L Sbjct: 488 IPTS-MPLARVGSDRP-TLHQSLQRSVRDALVSLGLHEIINYSFTDPGAADRLLLSADDP 545 Query: 529 RE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPE 582 R + + NP+ + S MRT+LLPGLL+ RN D FE+ VY + P+ Sbjct: 546 RRTVISLANPLVEEQSVMRTTLLPGLLETVSRNSKFRSLDLRFFEMRRVYLPRAGEEMPQ 605 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 +AA + GS EG W +E VD +DAK +++E + ++ ++ + Sbjct: 606 EPIRIAAAL-TGSREREG----WCHGAEA----VDFYDAKGIVENILE-LLHIEGAKWVA 655 Query: 643 GAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 P ++HPG+S I E + G GE HP + + F L PI FE+ + + Sbjct: 656 DTPEPYFHPGKSCSIVVGRERI-GALGEIHPAVQEAFDLDRPIYCFELDFEKL----VSC 710 Query: 702 TKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLG 759 + K + + S P RD+A +V + +PA +++ +K V R I+ V +FDV++G + Sbjct: 711 CRGKAAITVPSRFPDSTRDMALLVPEEVPADRIIDCVKGVKAREIEQVEIFDVYRGSGIP 770 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G KS+AI++ + + T D++I + ++ +++V K N +R Sbjct: 771 DGFKSIAIRIRYRSFERTLLDEEIAAIHAKVRDSLVNKVNVSIR 814 >gi|222056442|ref|YP_002538804.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] gi|221565731|gb|ACM21703.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sp. FRC-32] Length = 801 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 277/825 (33%), Positives = 448/825 (54%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M T +WL++ +D D+ + ++ D LT +GLEVE+V+ A + + +VL ++P+ D Sbjct: 1 MIVTYNWLREFVDCDLPVAELSDLLTMLGLEVERVETVGAGMDDVVVAQVLEKNQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G + + +VCGA N + G A G+ +P + KIRG ES GM+ Sbjct: 61 KLSLCKVNNGA-EILTIVCGAQNFKAGDKVALAQIGAVLP-GEFKIKRSKIRGEESCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+++SA IM L D +G + L L D I ++ LTPNR+DC+ + GIA + Sbjct: 119 CSEKELGLAEESAGIMILSADLQLGMPVFSALGLKDTIFEIGLTPNRADCLSIIGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 VAA LGK + P+ + +I ++ LC + V G + +P WM R Sbjct: 178 VAAKLGKKVKYPELRPVEGATAVTDITSVTIEAPELCPRYTARYVSGSKIGPSPQWMVNR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYD 296 LKAVG RSI+ +VDITNYV ++ G+P H FD +S + VR+A GEK LD Q Sbjct: 238 LKAVGQRSINNVVDITNYVLMEYGHPLHAFDFKFLSKGKIVVRQAAEGEKFDTLDGQVRT 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L ++ I R ++AGI+GGK++ D+TTD+L+E A ++P I R+ K LG+ T+S Sbjct: 298 LQSSDLTICDGDRAVALAGIMGGKNSEIADDTTDILIESAYFNPSAIRRTSKRLGLHTES 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRLS 415 +RFERG D+ + L SLI+ L GGT A + A R++ V ++ Sbjct: 358 SHRFERGTDVNILPIALDRAASLIVELAGGTLAKGVVDAYPQPVPERQVPVRVDRVNQVL 417 Query: 416 GIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI + D + ERL F+V + EV+VPS+R D+E + DLVEE+ R++G + I Sbjct: 418 GIKLSAADIKELFERLEFTVTKCDQGIMEVTVPSYRVDIEREIDLVEEVARLHGFENI-- 475 Query: 475 EPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ--SVLFGGG-- 527 P+ + Q + ++ L ++T VK +L + + EV+N+SF + + +L G Sbjct: 476 -PVTMPQARIFSETKSSYLTSAKT--VKDLLVCQGLSEVINYSFFAPDAYDKILLAGDDY 532 Query: 528 -QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPE 582 + +++LNP+S + S MRT+LLPGLL+ RN I + IFE+ +Y ++ PE Sbjct: 533 RRNTIQLLNPLSDEQSIMRTTLLPGLLETAARNASFRILNQRIFEMRRIYLPRHADEMPE 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD--SLRF 640 ++ AG+ G EG W+ E VD +D K ++ F +LD F Sbjct: 593 EPPFV-AGLLTGLRSAEG----WNQAKTE----VDFYDVKGILENI---FAALDVSGYSF 640 Query: 641 ESGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 E P +YHPG+S I + + V+G GE HP + + +GL P+ FE+ + + + Sbjct: 641 EVREPEPFYHPGKSAFIICNGD-VIGSLGELHPTVQEAYGLEKPLFYFELNFEKL---VE 696 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSL 758 R + V S RD+A +VD + A +VN + V I + +FD+++G ++ Sbjct: 697 CRREDHSVSAPSRFPDTYRDIALLVDDDVSAEAVVNCARKVKAAEIAQIEIFDLYKGSNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+AI+V + T D+++ + ++++ + +K NA +R Sbjct: 757 PAGQKSIAIRVRYSSKEKTLTDEEVNPVHQQVIQMLQQKLNASIR 801 >gi|296388798|ref|ZP_06878273.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAb1] Length = 792 Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust. Identities = 277/815 (33%), Positives = 436/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVSAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGAIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIERDGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ++PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQNVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|262066876|ref|ZP_06026488.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] gi|291379428|gb|EFE86946.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium periodonticum ATCC 33693] Length = 799 Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust. Identities = 274/818 (33%), Positives = 447/818 (54%), Gaps = 33/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+++I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESVDEIANALTMIGQEVEAIDIQGKDLGNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G+ +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGEEAPLQIICGATNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSDAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ESI IK +++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPVIEMAETIESINTVIKVNIEDKDRCKRYLGRVIKNVKIKESPEWLKTRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD E L Sbjct: 240 RAMGLNPINNVVDITNFVMFEYNQPMHAFDLDKVEGNITIRAAKENEEITTLDGVERVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +I G+IGG++ D++T ++ VEVA + P NI R ++LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIGGVIGGQNTQIDNDTKNIFVEVAYFTPENIRRESRDLGIFTDSSY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSL+ + G I + + R + +N E + + G Sbjct: 360 RNERGMDIENLAVVMNRAVSLLAEVAEGEVLSEVIDKYVEKPKRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ++ ++ +IL L + D + + PS+R D+ AD+ EE++R+YG D I+++ Sbjct: 420 NLTYDEVGKILTHLDIELKPLGDGTTLLIPPSYRADLTRPADIYEEVIRMYGFDNIEAK- 478 Query: 477 LPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 +P+ +E + N + + SR V+ +L + EV+N+SFI K LF G+ +EI N Sbjct: 479 IPVMSIESGEENTNFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGEEVIEIKN 536 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P+S DM+ MR +LL L+ N++R D +FE+S ++ EGQ +A I Sbjct: 537 PLSEDMAVMRPTLLYSLITNVRDNINRNQTDLKLFEISKTFKK-LGEGQNGLA--IEDLK 593 Query: 596 SGIEGSGR----LWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + SGR LW ++S+ F DL + + L+V + SL L + Sbjct: 594 IALILSGREEKNLW-NQSKSDYSFYDLKGYLEFLLERLNVTK--YSLTRLTNNKN----F 646 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKKV 707 HPG S +K E V+G FGE HPN++++FG+ F E+ L S+ K K K Sbjct: 647 HPGASAELKI-GEDVIGVFGELHPNLVNYFGIKREKVFFAELNLTSLL----KYIKIKVN 701 Query: 708 VHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 S +P V RDLA +D+ I G +V IK LI+ + +FDV+ G + + KKSVA Sbjct: 702 YETISKYPEVLRDLAITLDKSILVGEMVKEIKKKVNLIEKIDIFDVYSGDKIDKDKKSVA 761 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + ++++ T D+DI M I+E + K N +R Sbjct: 762 MSIVLRDKNRTLTDEDIDKAMTAILELIKDKYNGEIRK 799 >gi|157370389|ref|YP_001478378.1| phenylalanyl-tRNA synthetase subunit beta [Serratia proteamaculans 568] gi|157322153|gb|ABV41250.1| phenylalanyl-tRNA synthetase, beta subunit [Serratia proteamaculans 568] Length = 795 Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust. Identities = 270/814 (33%), Positives = 426/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + D +T GLEV+ V+ A + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVEPVAGAFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRTGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++DD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGITDDHDGIIELPEDAPIGTDIREYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++S ++ + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 GVLNQVALTEPDMSPVAATINDTLPIRVDAPQA--CPRYLGRVVKGIDVKAASPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD SRI + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLSRIEGGIVVRMANVGEPLTLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +++T DVL+E A ++P+ I + G+ TD+ Sbjct: 298 NADTLVIADHQKALAMGGIFGGEHSGVNESTQDVLLECAFFNPLAITGRARRQGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGQAGPVIDVTTESELPKRATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V + D + PSWR D+E + DLVEE+ R+YG + I Sbjct: 418 GHVVPSEQVSDILRRLGCQVTEQGDNWLAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ + K R L R VK +L E + +SF+ + L G+ L + Sbjct: 478 PVRADLIMTKHREADLTLKR---VKTMLVDHGYQEAITYSFVDPKVQALLHPGEEVLILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAG 590 +PIS +MS MR SL GLL A N +R +FE + DT Q M AG Sbjct: 535 SPISVEMSAMRLSLWTGLLSAVVYNQNRQQTRLRLFESGLRFVPDTAANLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G + E W + VD +D K D SV+E L ++F++ A HP Sbjct: 595 VIAGHTHEEH----WDLARKP----VDFYDLKGDLESVLELTGKLSEIQFKAEANPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I E V G+ G HP + L+ FE+ D + + + + Sbjct: 647 GQSAAIYFQGERV-GFIGVVHPELERKLDLNGRTVVFELEWDKVASRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAVTVAKCVEALKQRFQASLR 794 >gi|254785576|ref|YP_003073005.1| phenylalanyl-tRNA synthetase subunit beta [Teredinibacter turnerae T7901] gi|237683779|gb|ACR11043.1| phenylalanyl-tRNA synthetase, beta subunit [Teredinibacter turnerae T7901] Length = 794 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 279/829 (33%), Positives = 441/829 (53%), Gaps = 61/829 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ SWL+ ++ ++ E++ + LT GLEV+ V+ + S + ++L E++PD D Sbjct: 1 MKFSESWLRTWVNPSINTEQLVEQLTMAGLEVDGVEPVAGSFSQVVVGEILEAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++ QVVCGAPN RVG L+G PPG + K+RG+ Sbjct: 61 KLRVCKVAGAPDGIKQVVCGAPNARVGIKIPFALVGAQLPPGD--DGKAFKIKKAKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+C+E EL + DD + +MEL +DAPVG L +YL L+D II+V LTPNRSDC+ ++ Sbjct: 119 ESMGMLCAETELKVGDDDSGLMELALDAPVGTDLREYLRLNDTIIEVDLTPNRSDCLSLK 178 Query: 173 GIALDLVAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 G+A ++ ++ EI P S+ES P+E L + C +A +KGV + Sbjct: 179 GLAREVGVLNRCEVSYPEITPVAPQSAESFPVE----LLAGNACARYAGRVIKGVDVSAP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+++RL+ G+RSI A+VD+TNY+ L+ G P H FD +++ + VR A E + Sbjct: 235 SPQWLQERLRRGGIRSIDAIVDVTNYILLELGQPMHAFDLDKLNGGIRVRMAEQDECLTL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD QE L+ D +VIA ++AGI+GG+ + TT++ +E A + P+ IA ++ Sbjct: 295 LDGQEVKLNSDTLVIADAAGPLAMAGIMGGEPSSVTTTTTNIFLESAFFSPLAIAGRARS 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFM 407 G+ TDS +RFERGVD G + L+ L+L + GG A + T P R + Sbjct: 355 YGLHTDSSHRFERGVDFNGTVAALERATQLLLDIVGGEAGPVVCQELPTELPAARSVTLR 414 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ G +P ++ L IL RLG + +E +VP++R D+ + DL+EE+ RI Sbjct: 415 RERIELGLGFAIPDDEVLDILARLGLELRDTTATGWEFNVPTYRFDISIEEDLLEELARI 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSL---QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG + LP TQ+ L L Q+ V R L R E + +SFI + L Sbjct: 475 YGYNN-----LPSTQMRITAELPLIREQKIPEDRVARQLIGRGYQEAITYSFIDPKLHQL 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 F GG+ +E+LNPISADMS MRTSL+PGL+ RN++R + ++E +G Sbjct: 530 FEGGE-AVELLNPISADMSTMRTSLVPGLVDTLVRNLNRQQSRVRLYE----------KG 578 Query: 584 QKYMA--AGIRK--GSSGIEGSGRL---WS-DKSEERCRFVDLFDAKADALSVIEPFVSL 635 +++ AG+ + G +G+ R WS DK E VD +D K D S++ ++ Sbjct: 579 LRFVPSEAGLTQVPGIAGLIYGPRYEAAWSADKGE-----VDFYDLKGDLESLLA--ITG 631 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + +F HPG+ + + +IV GY G HP + ++ P+ FE LD Sbjct: 632 QAFQFAPSTRPAMHPGQCADVVLNDKIV-GYLGAIHPAVQKQLSIARPVFVFE--LDQQA 688 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ 754 +++ + K LS V RDLA +VD+ + + L +I+ N + + VFDV+ Sbjct: 689 VAEGTVPEFKP---LSKFPGVTRDLAVLVDKGVSSAQLEIVIRNNAGESLKKLKVFDVYS 745 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + +KS+A + Q T +++I + IV + + +A LR Sbjct: 746 GEGIDPKRKSLAFSLTFQHPSRTLNEEEINSAVSAIVAQLGDEFDASLR 794 >gi|254429966|ref|ZP_05043673.1| phenylalanyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] gi|196196135|gb|EDX91094.1| phenylalanyl-tRNA synthetase, beta subunit [Alcanivorax sp. DG881] Length = 796 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 283/823 (34%), Positives = 428/823 (52%), Gaps = 48/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F +WL++ ++ V + + LT GLEV+ V+ A FT V +V S E +PD Sbjct: 1 MRFNEAWLREWVNPAVDTDTLVQQLTMAGLEVDAVE--PAAPDFTGVVVGQVESCEPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D ++ ++ G +QVVCGA NVRVGL +A G+ +P + + K+RG ES G Sbjct: 59 ADKLSVCQVTNGTDT-VQVVCGAANVRVGLKMPFAQVGAVLP-GDFKIKKAKLRGQESNG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C EL L D +MELP DAPVG DYL L D II+V LTPNR+DC+ +RGIA Sbjct: 117 MLCGASELGLEDLIDGLMELPEDAPVGTDFRDYLSLDDTIIEVDLTPNRADCLSLRGIAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ L E IS + +I + L D++ C + +KGV N A P WM Sbjct: 177 EVGVMNQSPLTEAAISK--VAPAIDDALSVTLADNAGCPRYLGRVIKGVDVNAATPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ GLR+I +VD+TNYV ++ G P H FD +R+S +TVR+A + E + LD+QE Sbjct: 235 ERLRRAGLRTIDPIVDVTNYVLVELGQPLHAFDLARLSGGITVRKAKTDETLTTLDDQEL 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA D ++AG++GGK + T D+ +E A + P+ IA ++ G+ TD Sbjct: 295 TLRDDTLVIADDSAALALAGVMGGKPSSVTTETQDIFLECAFFAPLAIAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S +RFERGVD Q +++ +LI + GG + A + P++ + ++ Sbjct: 355 SSHRFERGVDPQLQSDAIEYATALIQQIAGGQVGPVTEAVDEAQLPKQAELTLRAERIEG 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G+ +P + IL RLG + D + V PSWR D+ + DL+EE+ RIYG ++ Sbjct: 415 LLGMGLPAQQVEDILSRLGMDISSNEDGLGWTVLAPSWRFDMAIEQDLIEELARIYGYEK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + S +P + + Q R + L R E + ++F+ L Sbjct: 475 LPSR-VPAGSPSGE-TVPEQIVAVRRLADALMDRGYQEAITYTFVESGLLAKVEPRVEPL 532 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTP--EG---QK 585 +LNPISAD+ MRT+LL GL N++R +FE + D P EG Q Sbjct: 533 PLLNPISADLGVMRTTLLAGLFSTARHNLNRQADRLRLFETGLRFVPTDAPDVEGGLEQT 592 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL---DSLRFES 642 M AG+ GS+ + W K R VD FD K D +E ++L + FE Sbjct: 593 PMIAGLLYGSAQPQN----WEGK-----RPVDFFDLKGD----VEALLALSDAQAFSFEP 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG++ +K E+V G+ G HP + L + FE L P+ Q Sbjct: 640 AEHPALHPGQTAALKRDGEVV-GFLGRIHPRLAADLDLPGQLYAFE--LAQAPLQQGSLP 696 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGE 760 V S ++RDLAF+V+ +PAG L+ +++ DRL V +FD++QG S+GE Sbjct: 697 SFAAV---SDQPRMRRDLAFVVEDSVPAGDLIAAVRSACDDRLT-GVKIFDIYQGDSIGE 752 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T +D ++ L+D +V + ++ NA LR Sbjct: 753 NRKSLALGLTFQDRSRTLKDQEVNDLVDAVVSQLKQQFNAALR 795 >gi|152989356|ref|YP_001347875.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PA7] gi|150964514|gb|ABR86539.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa PA7] Length = 792 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 278/815 (34%), Positives = 437/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E LD + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LDAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIERDGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLKERFNATLR 791 >gi|320539030|ref|ZP_08038705.1| phenylalanine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] gi|320030963|gb|EFW12967.1| phenylalanine tRNA synthetase, beta subunit [Serratia symbiotica str. Tucson] Length = 795 Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust. Identities = 275/816 (33%), Positives = 432/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ VS E + D +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVSSEALSDQITMAGLEVDGVEPVAGAFHGVMVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNIGDDRLLDIVCGAPNCHAGLKVAVATVGATLP-GDFKIKATKLRGELSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL+LSD I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHDGIIELPQDAPIGTDIRDYLQLSDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQR 237 L E ++S +++ L I+ +D + C + VKG+ +P WMR++ Sbjct: 180 SVLNQMALTEPDMSPVVATIDTTLPIR--VDATQGCPRYLGRVVKGINIKASSPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD +RI + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLNRIEGGIVVRMAEEGEALTLLDGNEVKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+++G +D+T DVL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALTMGGIFGGEYSGVNDDTQDVLLECAFFNPLSITGRARRQGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPAIQYQAMERATHLLIDICGGQAGPVIDVTDENELPKRATIQLHRKKLDRLL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V + D + PSWR D++ + DLVEE++R+YG + I Sbjct: 418 GHVVPSEQVSDILRRLGCQVTDQGDTWLAGAPSWRFDMKIEEDLVEEVVRVYGYNNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V K +L+L++ VK +L E + +SF+ + L G+ L Sbjct: 478 PVRADLVMTKHPEADLTLER-----VKTLLVDHGFQEAITYSFVDPKVQALLHPGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PISADMS MR SL GLL A N +R +FE + DT Q M Sbjct: 533 LPSPISADMSAMRLSLWTGLLSAVVYNQNRQQTRLRLFESGLRFVPDTSANLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G + E W + C+ +D +D K + SV+E L ++F + A Sbjct: 593 AGVIAGHTHDEH----W----DLACKPIDFYDLKGELESVLELTGKLSEIQFWAVANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E V GY G HP + L+ FE+ D + R +V Sbjct: 645 HPGQSAAIYLHGECV-GYIGVVHPELERKLDLNGRTLVFELQWDKV-----ARRAVPQVR 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++ A L K V I V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVAAEDILAECKKVVVNQIVGVNLFDVYRGKGVAEGHKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTACTLEEEEIAATVAKCVEALRQRFQASLR 794 >gi|330977714|gb|EGH77617.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 792 Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust. Identities = 273/819 (33%), Positives = 434/819 (52%), Gaps = 44/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLSLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A ++ I+ ++ E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQIAAVSAAHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G +T D+ +E A +D I++A ++ G+ TD Sbjct: 295 SLRADTLVIADHQRALAIAGVMGGEHSGVTASTRDIFLESAFFDTISVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ L+L + GG A + + + P + S V++ Sbjct: 355 ASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + R+L+ LG +V E D ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGLVIENAEIERLLKGLGLAVTAEADGQWRVEVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E K +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQK 585 + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q+ Sbjct: 528 AKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-QE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRD----VVDFFDVKADVEAVLGFAGALGEFTFTPGQH 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I+ V G+ G HP + GL P+ FE+ L + + Sbjct: 639 PALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG-----RLP 692 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +KS Sbjct: 693 KFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRKS 752 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 753 LAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|313672294|ref|YP_004050405.1| phenylalanyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] gi|312939050|gb|ADR18242.1| phenylalanyl-tRNA synthetase, beta subunit [Calditerrivibrio nitroreducens DSM 19672] Length = 789 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 267/820 (32%), Positives = 442/820 (53%), Gaps = 48/820 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M+ +L+W+KD +D + +S+++I + LT GLEVE ++ +E KV+S +++P+ D Sbjct: 1 MRVSLNWVKDFVDISGISVDEIAEKLTMSGLEVEGIEKKERAEGVVTAKVVSKDKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G QVVCGA NV G + +A G+ +P +++ K+RG+ES GM+ Sbjct: 61 KLSVCMVDDGTSV-YQVVCGAKNVDAGQIIPFARVGAKLP-GGVVIKDAKLRGVESKGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L ++S IM L D +G ++D + D ++++++TPNR+DC+ + G+A ++ Sbjct: 119 CSAAELGLEEESDGIMILSADTLIGIDINDIIRTDDVVLELNVTPNRADCLSILGVAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 +L + SE + + + C + +KGV +P WM+ RL Sbjct: 179 SILFDRELNIGGVKVDEESEEASSYRYVKVHNETNCPIYLGRIIKGVTIGESPLWMQNRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 ++ G+R I+ +VDITNYV L+ G P H FD + + VR A GEK++ LD +E L+ Sbjct: 239 RSAGVRPINNIVDITNYVMLEYGQPLHAFDLRMVEGGIIVRDAEEGEKVVTLDGKERTLT 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D +VIA + ++ ++AGI+GG+++G +T+DV +E A + P +I + + LG+ TDS Y Sbjct: 299 KDMLVIADEKKVLAVAGIMGGEYSGIQADTSDVFLECAYFKPESIRMTARRLGMKTDSSY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVFMNSEVKRLSGI 417 R+ERG+D + ++ + LI GG+ + + + P + F +V G+ Sbjct: 359 RYERGIDRVQTLKMVDYAAYLIKRYAGGSILKGVLKNDYKEFVPNRFKFHAKKVAEYIGV 418 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ ED L+IL+++G + G K PS+RQD+E DL EE+ RIYG D+I P+ Sbjct: 419 DISEEDVLKILKKVGIDIEG---KDTAVSPSYRQDIERWQDLSEEVARIYGYDKI---PV 472 Query: 478 PLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 + ++ K + SL Q R +K +LA EV+N+SF+S E F +++ NP Sbjct: 473 TVPKIYAKSDEESLLQKLIREIKYMLADLGYNEVINYSFMSGEYLRKFADESEFVKVKNP 532 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE---NDT--PEGQK--YMAA 589 ISADM MRT + PG+LK N I +FEV++V++ ND E K ++ Sbjct: 533 ISADMDTMRTVVFPGILKNIKLNYKNGIRKLKLFEVANVHKVNKNDKLPMEDTKLSFVVM 592 Query: 590 GIRKGSSGIEGSGRLWSD---KSEERCRFV-DLFDAKADALSVIEPFVSLDSLRFESGAP 645 G +S I GRL D + C+ V D + AD + +GA Sbjct: 593 GDFYRNSWI---GRLEDDLFYYIKSTCQAVFDRYKLNAD---------------YRAGAE 634 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTK 703 + HPG++ I + + + G+ GE HP + F L PI E+ L+S+ I + K++ Sbjct: 635 RFLHPGKNADIYINGDKI-GFLGEIHPEMYQFLDLEEPIYICEIDLNSLKDKIGEAKKSY 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V +D+A IV + +P+ + I+N LI DV +FD + G +GEG Sbjct: 694 KK----LSQYPFVYKDIALIVGKDLPSSKIYQYIQNFSELIKDVEIFDRYSGDKIGEGYV 749 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A ++ L+ T D++ ++ +I+ V K+ A LR Sbjct: 750 SLAFRIYFNHLEKTLTDEETNEIVQKIILGVEKEFGAKLR 789 >gi|237801010|ref|ZP_04589471.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023867|gb|EGI03924.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. oryzae str. 1_6] Length = 792 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 274/819 (33%), Positives = 432/819 (52%), Gaps = 44/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A ++ ++ + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQVAAVAAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G T DV +E A +D I++A ++ G+ TD Sbjct: 295 SLRADTLVIADHQRALAIAGVMGGEHSGVTSGTRDVFLESAFFDTISVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD Q ++ L+L + GG A + + + P + S V++ Sbjct: 355 ASHRFERGVDWQLAREAMERATGLLLEITGGEAGPVIEVTSEQHLPSIAPVTLRASRVEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGLVIKNAEIERLLTGLGLTVSAETDGQWRVDVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E K +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFTPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQK 585 + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q+ Sbjct: 528 AKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-QE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFTPGQH 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I+ V G+ G HP + GL P+ FE+ L + + Sbjct: 639 PALHPGQTARIERDGREV-GFLGSIHPELSKNLGLDRPVFVFELVLAEVSTG-----RLP 692 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +KS Sbjct: 693 KFNELSRFPEVRRDLALLADRDVSASAVMDVIRENAGEWLTDLRLFDVYQGKGIDPHRKS 752 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 753 LAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|302187618|ref|ZP_07264291.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae 642] Length = 792 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 275/820 (33%), Positives = 434/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLSLDDSSIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + + + +S + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQVVAVSA-VHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLAVTAEADGQWRVEVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P + E K +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFTP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRD----VVDFFDVKADVEAVLGFAGALGEFTFTPGQ 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I+ V G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|218507630|ref|ZP_03505508.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli Brasil 5] Length = 363 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 194/361 (53%), Positives = 262/361 (72%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSAS 132 +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMCSEKE+ +SD+ Sbjct: 3 VQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMCSEKEMQISDNHDG 62 Query: 133 IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS 192 I++LP DAPVG + Y L DP+++++LTPNR DC + GIA DL A+GLG LK Sbjct: 63 IIDLPDDAPVGQSYAAYAHLDDPVMEINLTPNRPDCTSIHGIARDLAASGLGTLKTRAAP 122 Query: 193 CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDI 252 P+++ DLDD LC GFA+ V+GVRN +P WM+QRL A+GLR I+ALVDI Sbjct: 123 SFAVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLLAIGLRPINALVDI 182 Query: 253 TNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 TNY++ D+G P HVFDA++++ LTVRRA GE +LALD +EY L P+NVVI+ + I+S Sbjct: 183 TNYMTFDQGRPMHVFDAAKVTGNLTVRRAREGETVLALDQREYKLGPNNVVISDEDGIES 242 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 I GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYRFERGVD + M+P Sbjct: 243 IGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYRFERGVDPEYMVPG 302 Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG 432 L+ L+L LCGG A+ + ++P+ + F SEVKRL+G++V E+S IL RLG Sbjct: 303 LERTTELVLELCGGMAARAEVVGYKGHEPKVVDFPYSEVKRLTGLEVSTEESNAILARLG 362 Query: 433 F 433 F Sbjct: 363 F 363 >gi|116050729|ref|YP_790450.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa UCBPP-PA14] gi|115585950|gb|ABJ11965.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa UCBPP-PA14] Length = 792 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 276/814 (33%), Positives = 435/814 (53%), Gaps = 34/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E LD + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LDAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAG 590 + NPISADM+ MR+SL PGL+KA N++R + +FE + Q+ M AG Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLESLKQEAMLAG 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 G EG W++ + VD FDAKAD +V+ +L F G HP Sbjct: 592 AICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALHP 643 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G++ I+ +V GY G HP + L P+ FE+ L + K L Sbjct: 644 GQTARIEREGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFREL 697 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ + Sbjct: 698 SRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVGL 757 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q T DD++ IV ++ ++ NA LR Sbjct: 758 TWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|148264667|ref|YP_001231373.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter uraniireducens Rf4] gi|146398167|gb|ABQ26800.1| phenylalanyl-tRNA synthetase beta subunit [Geobacter uraniireducens Rf4] Length = 801 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 285/830 (34%), Positives = 455/830 (54%), Gaps = 56/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D D+ ++ D LT +GLEVE+++ + + +V ++P+ D Sbjct: 1 MIVTYNWLKEFVDCDLPAAELSDLLTMLGLEVERMETVGGGMDDVVVAQVEEKAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G + + +VCGA N + G A G+ +P + KIRG ES GM+ Sbjct: 61 KLSLCKVNNGS-EILTIVCGAQNFKTGDKVALAQIGAVLP-GEFKIKRSKIRGEESYGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+D+SA IM LP D +G + L L D I ++ LTPNR+DC+ V GIA + Sbjct: 119 CSEKELGLADESAGIMILPSDFQLGMPVFSALGLKDTIFEIGLTPNRADCLSVIGIARE- 177 Query: 179 VAAGLGKLKEINISCP---LSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +AA LGK IS P L + P+ +++ LC + + G + +P W Sbjct: 178 IAAKLGK----KISYPGHELVEGATPITDVTSINVEAPDLCPRYTARYISGCKIGPSPQW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 M RLKAVGLRSI+ +VD+TNYV ++ G+P H FD + ++D + VR A GE+ + LD Sbjct: 234 MVNRLKAVGLRSINNVVDVTNYVLMEYGHPLHAFDFNHLADGKIIVRPAGDGERFVTLDG 293 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE L ++ I R ++AGI+GG+++ D+TT++L+E A ++P +I R+ K LGI Sbjct: 294 QERVLQSSDLTIRDGQRGVALAGIMGGQNSEIGDDTTNILLESAYFNPSSIRRTSKRLGI 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEV 411 T+S +RFERG D+ + L +SLI L GG+ A I PRK+ + Sbjct: 354 HTESSHRFERGADVNILPKALDRAISLIAELAGGSVAQGIIDIYPQPVLPRKLTARVERI 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+ + ++ + +RL F+V EV VPS+R D+E + DLVEEI R+ G + Sbjct: 414 NQMLGLSLSSDEVCDLFQRLEFNVTESVQGIVEVLVPSFRVDLEREIDLVEEIARLNGFE 473 Query: 471 QIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGG 526 +I P+ + Q +L S Q + VK +L + + EV+N+SF + ++ +L Sbjct: 474 KI---PVTMPQARIFSDLPSKHQIIGKSVKDLLVCQGLSEVINYSFFAPDAYDKVILVRD 530 Query: 527 GQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 R +++LNP+S + S MRT+LLPGLL+ RN + IFE+ +Y ++ Sbjct: 531 DYRRNTIKLLNPLSDEQSIMRTTLLPGLLETAARNASFRTLNQRIFEMRRIYLPKHGDEL 590 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWS-DKSEERCRFVDLFDAKADALSVIEP-FVSL--D 636 PE Y+ AG+ G +EG W+ DK+E VD +D K +IE FV L Sbjct: 591 PEEPLYV-AGLLTGFRNVEG----WNQDKTE-----VDFYDVKG----IIENIFVELHIS 636 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-I 694 FE+G P S+YHPG++ I + E + G GE HP + + +GL P+ FE+ + + Sbjct: 637 GASFEAGNPESFYHPGKACTILCAGETI-GSLGELHPTVQENYGLEKPLYYFEINFEKMV 695 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVF 753 P S T V S RD+A ++D P+ +V K++ + DV +FD++ Sbjct: 696 PHSM----DTVSVNPPSRFPDTCRDIAMLIDDDTPSDAVVACAKSIKAAEVQDVEIFDLY 751 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G+++ G+KS+AI+V T DD++ + R+++ + KK N +R Sbjct: 752 KGENIPVGQKSIAIRVRYSSRDKTLSDDEVTPIHQRVIDTLRKKLNVTIR 801 >gi|15597935|ref|NP_251429.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa PAO1] gi|30316293|sp|Q9I0A4|SYFB_PSEAE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|9948817|gb|AAG06127.1|AE004702_4 phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa PAO1] Length = 792 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 278/815 (34%), Positives = 438/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P++ I K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELPDDFKIKKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL+D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELADYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIEREGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|226944152|ref|YP_002799225.1| phenylalanyl-tRNA synthetase subunit beta [Azotobacter vinelandii DJ] gi|226719079|gb|ACO78250.1| phenylalanyl-tRNA synthetase, beta subunit [Azotobacter vinelandii DJ] Length = 792 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 274/818 (33%), Positives = 427/818 (52%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+D ++ VS +++ L+ GLEV+ V S + ++LS E +PD D Sbjct: 1 MKFSEQWLRDWVNPQVSRDELVARLSMAGLEVDSVAPVAGDFSGVVVGEILSSEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ G + QVVCGAPN R G+ +A G+ + E+ I K+RG+ES GM+ Sbjct: 61 KLRVCRVGNGS-EVFQVVCGAPNARPGIKIPFAMLGAVLGEDFKIKKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++ELP DAP+G + YL L D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAAELKISEENDGLLELPADAPLGLDIRTYLNLDDASIEVDLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L+ +I+ P+ E P+E+ C + V+ V + P WM Sbjct: 179 GALYSVPLRRPSIAAVSPVHDEVPPVEVL----APRACPRYLGRVVRNVELSWPTPPWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R+I VD+TNYV L+ G P H FD + I + VR A GEK++ LD QE Sbjct: 235 ERLRRSGVRTIDPAVDVTNYVMLELGQPMHAFDLAEIQGGIRVRMAEEGEKLILLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G T D+ +E A +D I IA ++ G+ TD Sbjct: 295 SLRADTLVIADHRRALAIAGVMGGEHSGVSCTTRDLFLESAFFDTIAIAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD Q ++ +L+L + GG I + P+ I +++ Sbjct: 355 ASHRFERGVDWQLAREAMERATALLLEIVGGEPGPIVEVVDSPSLPKVAPITLRAERIEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ V + R L LG V G ++ + VPS R D+ + DL+EE+ R++G D + Sbjct: 415 MLGMPVEPGEVERPLVALGLKVSGGASGEWRIEVPSHRFDIALEVDLIEELGRLHGYDNL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E + L + ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQARAEARSELPV-------LRRLLVARGYQEAITYSFIDPKLFELFTPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 + L + NPISADM+ MR SL PGL+KA N++R + +FE + Q+ Sbjct: 528 VKPLTLANPISADMAAMRASLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLDNLMQEA 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + AG+ GS E WS E VD +D KAD ++I + D RF SG Sbjct: 588 VLAGVVAGSRLPES----WSHDREA----VDFYDVKADVEALIAAAGAGDEYRFVSGEHP 639 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I+ + +V G+ G HP + GL P+ FE+ L I + Sbjct: 640 ALHPGQTARIERAGRLV-GFLGALHPELGKVLGLDQPLFLFELVLAEIAAG-----RLPA 693 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 LS V+RDLA IVD+ PA ++ I+ + D+ +FDV+QGK + +KS+ Sbjct: 694 FHELSRFPEVRRDLALIVDRDTPAEAVLQTIREAAGEYLTDLRLFDVYQGKGIDPQRKSL 753 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 754 AVGLTWQHPSRTLNDDEVNSTTQNILASLGERFNATLR 791 >gi|330958894|gb|EGH59154.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. maculicola str. ES4326] Length = 792 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 274/820 (33%), Positives = 433/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGLVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A ++ I+ + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD S I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLSEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ TD Sbjct: 295 SLRADTLVIADHQRALAIAGVMGGEHSGVTTGTRDIFLESAFFDTISVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD Q ++ L+L + GG A + + + P + S V++ Sbjct: 355 ASHRFERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P + E K +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFTPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQK 585 + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q+ Sbjct: 528 AKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-QE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFAFTPGQH 638 Query: 646 SWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 639 PALHPGQTARILRDGREV--GFLGAIHPELSKTLGLDRPVFVFELVLAEVATG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|238749477|ref|ZP_04610982.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia rohdei ATCC 43380] gi|238712132|gb|EEQ04345.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia rohdei ATCC 43380] Length = 795 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 270/821 (32%), Positives = 431/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ +D + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGIDAVAGEFNGVVVGQVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLRVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+DS I+ELP DAP+G L +YL L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDSDGIIELPADAPIGVDLREYLNLNDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E ++S P+++ ++ P+ + D C + VKG+ A P WM Sbjct: 180 AVVNQLPLIEPDMS-PVAATINDTFPIRV----DAPQACPRYLGRVVKGIDVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A GE++ LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIDGGIIVRLAAEGEELTLLDGTK 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++AGI GG+H+G ++ T DVL+E A ++P++I + G+ T Sbjct: 295 AKLSADTLVIADQQKPLAMAGIFGGEHSGVNEETRDVLLESAFFNPLSITGRARRQGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD + ++ L++ +CGG A + P++ I ++ Sbjct: 355 DASHRYERGVDPELQHKAIERATRLLIDICGGEAGPVIDVTATAELPKRATIKLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G VP E IL RLG V ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 415 RLIGHHVPSEQVSDILRRLGCQVTELGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYNNI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 P+ K NL + + R + VK L R E + +SF+ + L Sbjct: 475 PDVPI-------KANLVMTKHREADLSLKRVKTALVDRGYQEAITYSFVDPKVQALLHPQ 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG-- 583 Q L + +PIS DMS MR SLL GLL A N +R +FE + V +N G Sbjct: 528 QDALILPSPISVDMSAMRLSLLTGLLSAVVYNQNRQQTRLRLFESGLRFVPDNTADLGVR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ +G + + + + +D +D K D +++E L ++F + Sbjct: 588 QDVMLAGVI--------TGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A S HPG+S I S E + G+ G HP + L+ FEV + + Sbjct: 640 AHSALHPGQSAAIYLSGEHI-GFIGVVHPELERKLSLNGRTVVFEVQWNKL-----ADRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGK 762 K +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG Sbjct: 694 VPKASDISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + R VE + ++ A LR Sbjct: 754 KSLAISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|257486167|ref|ZP_05640208.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] gi|330989236|gb|EGH87339.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M301315] gi|331010497|gb|EGH90553.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 792 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 275/824 (33%), Positives = 432/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A I + + P + Sbjct: 350 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPITEVVSEKHLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLGLAVTAEADGQWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFSPDAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +LD F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALDEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|261868044|ref|YP_003255966.1| phenylalanyl-tRNA synthetase subunit beta [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413376|gb|ACX82747.1| phenylalanyl-tRNA synthetase, beta subunit [Aggregatibacter actinomycetemcomitans D11S-1] Length = 796 Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust. Identities = 259/820 (31%), Positives = 433/820 (52%), Gaps = 42/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAISTEQLCDQITMLGLEVDGVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAKLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP DAP+G L DYL+L D +I++SLTPNR+DC+ + G+A +L Sbjct: 120 CSFSELGIESDANGIIELPQDAPIGTNLRDYLKLHDNVIEISLTPNRADCLSITGVAREL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + KL E +I +++ D+ C + + V+ V +P WM+++ Sbjct: 180 --AVVNKLHENPPHFKAVQPTIDDKVQIDVLAPEACPRYLLRVVRNVNVKAQSPMWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNYV L+ G P H FD ++++ + VR A E+++ LD L Sbjct: 238 LRRCGIRSIDPIVDVTNYVLLELGQPMHAFDMAKVAQPIQVRMAKENEELVLLDGTTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIITDS 356 P+ +VIA ++AGI GG+ + + + TTDV++E A + P+ I + G+ TDS Sbjct: 298 QPNTLVIADQNGALAMAGIFGGETSSVNAETTTDVILEAAFFAPLAITGRARQYGLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRL 414 +RFERGVD + ++ +L+L +CGG A +IC N Y P++ + + ++ L Sbjct: 358 SHRFERGVDFELPRKAMERATALLLDICGGEAGEICEVVNAQYLPKRQQVTLQHHKLDAL 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-K 473 G + E IL+RLG V D + PSWR D+E DL+EE+ RIYG + I Sbjct: 418 LGHHIATETVTDILQRLGLQVSYAADTWTAIAPSWRFDIEIAEDLIEEVARIYGYNSIPN 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + PL ++ + + ++ SR +K L S E + +SF+ + L + + + Sbjct: 478 NAPLAHLRMREHKEADIELSR---IKAALTSCDFYEAITYSFVDPKIQSLLHPDVKPMVL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQKYMAA 589 NPIS +MS MR SLL GLL A N +R + +FE + D Q+ + A Sbjct: 535 PNPISVEMSAMRVSLLTGLLGAVIYNQNRQQSRVRLFEHGLRFIPDEKAEFGVHQEPVFA 594 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS----LRFESGAP 645 + G S WS+K+ D +D K IE +SL S +F + + Sbjct: 595 AVMTGLK----SNEQWSEKAVP----ADFYDLKG----YIENLLSLSSAGNRAKFVAKSY 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + HPG+S I E + G+ G+ HP I GL+ + ++ I ++ R + Sbjct: 643 TALHPGQSAAIMLDGEEI-GFIGQLHPTIAQKIGLTG-----KAFVCEISVAHISRREVA 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKK 763 + +S +RDLA +V +IPA ++ + + D+L + +FDV+ G + G K Sbjct: 697 RAKEISRFPANRRDLAVVVADNIPANDVLEVCRTAGGDKLT-QINLFDVYHGTGVAAGHK 755 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI ++IQ + T +D+I ++ ++ + + NA LR Sbjct: 756 SLAISLVIQDNEKTLEEDEINAVISTVLSELKQCFNAYLR 795 >gi|332161616|ref|YP_004298193.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605893|emb|CBY27391.1| phenylalanyl-tRNA synthetase beta chain [Yersinia enterocolitica subsp. palearctica Y11] gi|325665846|gb|ADZ42490.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 795 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 271/817 (33%), Positives = 431/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALAHQITMAGLEVDGVEAVAGEFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP+DAP+G L DYL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPVDAPIGVNLRDYLNLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++ SS L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVLNKLPLTEPEMNPVASSLKDSLLIRVDAPQA--CPRYLGRVVKGINVKTATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN+V L+ G P H FD RI + VR+A GE + LD+ + L Sbjct: 238 LRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRIDGGIIVRQATEGEDLTLLDDTKVKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 SADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKRL 414 +R+ERGVD + ++ L++ +CGG A D+ A N+ K I ++ RL Sbjct: 358 HRYERGVDPELQYKAIERATRLLIDICGGEAGPVIDVTSAENLP-KRATITLHREKLDRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G VP E IL RLG V + ++ PSWR D+E + DLVEE+ RIYG D I + Sbjct: 417 IGYPVPAEQVSDILRRLGCQVTEQGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYDNIPN 476 Query: 475 EPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ V K NLSL++ VK L R E + +SF+ + L Q L Sbjct: 477 VPIKANLVMTKHREANLSLKR-----VKTALVDRGYQESITYSFVDPKVQALLHPQQDAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYM 587 + +PIS +MS MR SLL GLL A N +R + +FE + V +N G Q M Sbjct: 532 ILPSPISIEMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNKADLGVRQDVM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + +G + + + + +D +D K D +++E L ++F + A Sbjct: 592 LAAVI--------TGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I S E + G+ G HP + L+ FEV + + + Sbjct: 644 LHPGQSAAIYLSGEHI-GFIGVVHPELERKLSLNGRTVVFEVQWNKL-----ADRAVPQA 697 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+A Sbjct: 698 SEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +++I + R VE + ++ A LR Sbjct: 758 ISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|298486706|ref|ZP_07004763.1| Phenylalanyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158789|gb|EFH99852.1| Phenylalanyl-tRNA synthetase beta chain [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 792 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 275/820 (33%), Positives = 432/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VL E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLGTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + +I + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAADVTR-PQIAAVAAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A I + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLEIIGGEAGPITEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLAVAAEADGQWRVEVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P + E K +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F+ G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFKPGQ 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I+ V G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|170726420|ref|YP_001760446.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella woodyi ATCC 51908] gi|169811767|gb|ACA86351.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella woodyi ATCC 51908] Length = 795 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 440/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ ++S +++ +T GLEV+ VD S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPNISRDELSHQITMAGLEVDGVDGVAGEFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G+ + I +VCGA N R+G+ A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKINVGQDELIDIVCGASNCRLGIKVAVAMVGAVLP-GNFKIKKAKLRGEPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP DAP+G L +YL L D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDIESDGILELPSDAPLGTDLREYLSLDDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L ++ P +P ++ DL + C + VK + P WM Sbjct: 180 -----GVLNRQAVTEPTWEAVVPSIDDSVQVDLQAPASCARYLGRVVKNINVKAQTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD +++ + VR EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLEGDIQVRMGNGAEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D++VI+ + + ++AG+ GG+ +G T D+++E A + P+ I + LG+ T Sbjct: 295 ITVPADSLVISDEKKPLALAGVFGGEFSGVGAETQDIMLECAYFAPLAILGKTRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A +C A++ KP I S++ Sbjct: 355 DSSHRFERGVDPELQHKVMDRATRLVLDICGGEAGPVCEAKSEENLPKPVGITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + + IL+RLGF+V ++EV ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHISDAEVTEILQRLGFNVAVSEGQWEVVTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + + R V+ +L SR E + +SF+ + L Q + Sbjct: 475 PNTAPIASLSMPDHKESDISLKR---VRSMLVSRGFQEAITYSFVDPKMQALVHPEQEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---EN-DTPEGQKYM 587 + NPIS +MS MR S L GLL A G N R +FE + EN D+ Q+ M Sbjct: 532 ILPNPISVEMSAMRLSTLTGLLSAVGYNQSRQQNRVRLFESGLRFVPDENADSGVRQQAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + G+ E WS +S + VD FD K D +++ VS + F S A Sbjct: 592 LGAVISGAQNDEH----WSMES----KTVDFFDLKGDLEAILGLTVSDEEFTFRSAAHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + + V+G G HP++ FGL+ FE+ LD++ ++ +T Sbjct: 644 LHPGQCAEILRN-DRVIGVIGAVHPSLEKPFGLNGKTIVFELELDALLHARLPLAQT--- 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +VD+ + AG +V +I+ V ++L+ + +FDV+QGK + G+KS+ Sbjct: 700 --VSKFPANRRDIAILVDEEVFAGDVVKMIRKVGQNQLV-GINLFDVYQGKGVEPGQKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q T + +I ++D +V+ + + NA+LR Sbjct: 757 AIALTLQDNTRTLEEKEIAEMVDSVVDALKTEFNALLR 794 >gi|77458163|ref|YP_347668.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas fluorescens Pf0-1] gi|91208131|sp|Q3KEX7|SYFB_PSEPF RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|77382166|gb|ABA73679.1| phenylalanyl-tRNA synthetase beta chain [Pseudomonas fluorescens Pf0-1] Length = 792 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 431/821 (52%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + V + + L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVDRDALVARLSMAGLEVDSVTPAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + + + +MELP DA VG YL+L D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSQAELQIGEGNDGLMELPADASVGEDFRVYLDLEDASIEVDLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 G L + ++ P+ ++P E++ ++ + C + ++ V + P W Sbjct: 179 -----GALYDAPVTRPVVM-AVPAAHDEVRSVEVLAPAACPRYLGRVIRNVDLSRPTPLW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Q Sbjct: 233 MVERLRRAEVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L D +V+A R +IAG++GG+H+G T DV +E A +D I +A ++ G+ Sbjct: 293 EVSLRSDTLVVADHTRALAIAGVMGGEHSGVSATTRDVFLESAFFDQIAVAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +R+ERGVD Q ++ L+L + GG A I + + P I + Sbjct: 353 TDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPIIETVSEQHLPSIAPITLRAQRI 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+++ + R+L LG V + ++ V VPS R D+ + DL+EE+ R+YG + Sbjct: 413 TQMLGMEMDSAEVERLLNALGLKVSADGAGQWRVEVPSHRFDISLEVDLIEELARLYGYN 472 Query: 471 QI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ ++ P + E + +L ++R+L +R E + +SFI +Q LF Sbjct: 473 RLPVRYPQARLAPQAKAEARSDLP-------ELRRLLVARGYQEAITYSFIDPKQFELFN 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 G L + NPIS DM+ MR+SL PGL+KA N++R +FE + EG Sbjct: 526 PGVEPLLLANPISNDMAAMRSSLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQL-EGLK 584 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W+ + VD FD KAD +V+ +LD F G Sbjct: 585 QEPMIAGVVCGSRLPEG----WAQGRDT----VDFFDVKADVEAVLGFAGALDQFTFAPG 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I+ V G+ G HP + GL P+ FE+ L + + K Sbjct: 637 KHPALHPGQTARIEREGREV-GFIGAIHPELSKSLGLDRPVFVFELVLAEVALG-----K 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA I + + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 MPKFHELSRFPEVRRDLALIAHKDVAASAVLDVIRENAGEWLTDLRLFDVYQGKGIDTDR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNSTTQNILTSLEQRLNATLR 791 >gi|218891081|ref|YP_002439947.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas aeruginosa LESB58] gi|218771306|emb|CAW27071.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa LESB58] Length = 792 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 277/815 (33%), Positives = 436/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRTDTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIEREGRLV-GYLGALHPELAKKLDLEQPVLLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|121997235|ref|YP_001002022.1| phenylalanyl-tRNA synthetase subunit beta [Halorhodospira halophila SL1] gi|121588640|gb|ABM61220.1| phenylalanyl-tRNA synthetase beta subunit [Halorhodospira halophila SL1] Length = 792 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 260/824 (31%), Positives = 415/824 (50%), Gaps = 55/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 M+ + WL++ ++ +S + + + LT GLEV+ V+ A PF+ V V ++ +P+ Sbjct: 1 MRVSEQWLREWVNPSLSTQALAEALTMAGLEVDAVE--PAAPPFSGVVVGAITDCRPHPE 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +D G + +++VCGAPN R GL A G+ +P + V ++RG+ S G Sbjct: 59 ADRLQVCTVDAGG-ERLEIVCGAPNARPGLHAPLARAGAELP-GGLQVQATEVRGVASAG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL L+D++ ++ELP +G L L L D I+++ LTPNR+DC+G+ GIA Sbjct: 117 MLCSASELGLADEAGGLLELPETLALGNDLRQALALDDTILEIDLTPNRADCLGMTGIAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL------EIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 D+ A +++ S+E +P+ +++ L + C + + V N A Sbjct: 177 DVAARTGAEMQ--------STEPLPVPAACDAQLEISLQAEADCPRYTGRVIHDV-NPQA 227 Query: 231 PN--WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WMR+RL+ G+RS+SALVDITNYV L+ G P H FD R++ +T RRA SGE + Sbjct: 228 PTPIWMRERLRRAGIRSVSALVDITNYVMLESGQPLHAFDLDRLAPPVTARRAHSGETLT 287 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L ++ +L +VIA + AG++GG+ D TT + +E A + P IA + Sbjct: 288 LLGGEQVELDDGVLVIADANGPVAFAGVMGGETTAVSDETTSIFLEAAHFHPTTIAGRAR 347 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVF 406 G+ TDS +RFERGVD + + L++ +CGG I +A + I Sbjct: 348 RYGLHTDSSHRFERGVDFEAPRAASERATQLVIEICGGRPGPINEAVAHQALPQRAPIEL 407 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ L G + E +L RLG D + V PSWR D+E + DL+EE+ R+ Sbjct: 408 RRERLEGLLGWSIEPEQVTGMLRRLGTEPEPSADGWRVQPPSWRFDMEREVDLIEEVARL 467 Query: 467 YGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 YG D + PL PL QQ R ++ L R E +N++F+ + Sbjct: 468 YGFDNVPERPLRAPLHVATAPE----QQLDDRPLRTTLVERGYFEAINYAFVDPQLQQRL 523 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-G 583 L + NP+SA+++ MRTSL PGLL A RN R +FE + + Sbjct: 524 DPESEALPLANPLSAELAVMRTSLWPGLLMAAQRNQHRQHERVRLFECGRTFRGHLDDLA 583 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ +G ++++ + R VD FD KAD ++I + + FE Sbjct: 584 QTPMLAGL--------AAGPRYAEQWDAPRRSVDFFDVKADLEALIAQTGNASAFTFEPA 635 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I + +G+ G HP D L FE+ L+++ R + Sbjct: 636 QHPALHPGQSARILRDG-VSVGWLGTLHPEHADALELHGAPVLFEITLEAL-----SRAE 689 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV----FDVFQGKSLG 759 + +S ++RDLA +VD H+PAG L+ + D V FDV++GK + Sbjct: 690 LPRFQPISRYPSIRRDLAVLVDDHVPAGELLRTAREA---AGDCAVGGRLFDVYRGKGVP 746 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G+KS+A+ +++Q T D D+ +M +V + ++ A LR Sbjct: 747 DGQKSIAMGLILQDYSRTLTDRDVDDVMAGVVSRLQQQFGASLR 790 >gi|108761050|ref|YP_631784.1| phenylalanyl-tRNA synthetase subunit beta [Myxococcus xanthus DK 1622] gi|108464930|gb|ABF90115.1| phenylalanyl-tRNA synthetase, beta subunit [Myxococcus xanthus DK 1622] Length = 815 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 261/821 (31%), Positives = 435/821 (52%), Gaps = 34/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 +K ++ WL D++ S +++ LT+ GLE+E ++ EAL + ++ ++P+ D Sbjct: 12 VKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQIKESVQHPNAD 71 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G +QVVCGA N +VG A G+ +P N M + +RG++S GM+ Sbjct: 72 KLSVTQVDIGGTALLQVVCGAKNFKVGDKVPLATVGAKLP-NGMDIKQAALRGVDSFGML 130 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL LS++S+ ++ LP D VG +++ + L +++V++TPNR D + G+A ++ Sbjct: 131 CSSKELGLSEESSGLLILPADTRVGTPIAEAVGLDGVVLEVNVTPNRPDALSHLGVAREV 190 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 LK S ++K ++ C + V+ V+ +P WM+ RL Sbjct: 191 SVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIGPSPQWMQDRL 250 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 KA G+R+I+ +VD+TNYV+L+ G P H FD +++ + VR A GEK+ LD ++ L Sbjct: 251 KAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKLKTLDGKDRVL 310 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D++VIA R Q+IAG++GG + + T +++E A + + RS K G+ T++ Sbjct: 311 DVDDLVIADKDRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSSKRHGLHTEAS 370 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KPRKIVFMNSEVKR 413 +RFERG D+ ++P + LI L GGT + R Y PRK+ + V++ Sbjct: 371 HRFERGADMDAVVPAIDRAAQLIAELAGGT---VAPGRVDVYPAPKPPRKVTLRFARVEQ 427 Query: 414 LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ V ++ RILE LGF + E + VP R DVE + DL+EE+ RIYG D I Sbjct: 428 VLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVARIYGYDNI 487 Query: 473 KSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + LP T + N + R +++ LA EVVN+SF++ + GG ++ Sbjct: 488 PAT-LPRGLATLAPEPANAEAE----RRMRQALAGAGFDEVVNYSFVAPRSLEVLGGAEK 542 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP--EGQKYM 587 + +LNP+S + S MRTSLLPGLL+ R+V + AI+E Y D +GQ+ Sbjct: 543 PVALLNPLSTEQSVMRTSLLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQRPA 602 Query: 588 AAGIRKGSS---GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 A + + + G+ G GR W+ K D +DAKA A+ + + ++ + + Sbjct: 603 AREVPRVAGLVWGLRGGGRSWTHKDAR----ADFYDAKA-AVEGLLGALRVEGVTYVPAG 657 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P+ YHP +K + VLG+ GE HP + GL + + FE LD+ P+ + Sbjct: 658 PAAYHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFE--LDTEPLYAASKL-V 714 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKK 763 L V RDLA +V +P + +I V + L++D VFDV+ G+ + +G+K Sbjct: 715 PAYRSLPRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRK 774 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++A + + + T D ++ RIV+ V ++ A LR+ Sbjct: 775 NLAYALRYRSAERTLTDVEVNEAHQRIVDEVKQRLGAALRA 815 >gi|66045407|ref|YP_235248.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae B728a] gi|75502332|sp|Q4ZUG2|SYFB_PSEU2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|63256114|gb|AAY37210.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. syringae B728a] Length = 792 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 274/820 (33%), Positives = 433/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLSLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + + +S + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQVAAVSA-VHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L+ LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLKGLGLAVTAEADGQWRVEVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P + E +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPQAKAEASGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFTPGQ 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I+ V G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|71735950|ref|YP_274359.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. phaseolicola 1448A] gi|91208129|sp|Q48JR8|SYFB_PSE14 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71556503|gb|AAZ35714.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. phaseolicola 1448A] gi|320328571|gb|EFW84573.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. race 4] Length = 792 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 274/824 (33%), Positives = 432/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRAYLSLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD + ++ L+L + GG A I + + P + Sbjct: 350 GLHTDASHRYERGVDWELAREAMERATGLLLEITGGEAGPITEVVSEQHLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLGLAVTTEADGQWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|85858503|ref|YP_460705.1| phenylalanyl-tRNA synthetase subunit beta [Syntrophus aciditrophicus SB] gi|93140712|sp|Q2LR26|SYFB_SYNAS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|85721594|gb|ABC76537.1| phenylalanyl-tRNA synthetase beta chain [Syntrophus aciditrophicus SB] Length = 804 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 279/832 (33%), Positives = 450/832 (54%), Gaps = 57/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE---ALSPFTIVKVLSVERNPD 57 M+ +L WLKD++D D++ ++ D LT GLEV+ V RE + S + +++++ R+P+ Sbjct: 1 MQVSLRWLKDYVDIDLTPAEVSDRLTMAGLEVDAV--REVGPSFSNVVVARIIALRRHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D ++ + TG + + +VCGAPN+ VG + A G+ IP + KIRG S G Sbjct: 59 ADKLSLCEVTTGD-ETLPIVCGAPNIHVGDVVPLARIGAEIP-GGYTIKRSKIRGELSEG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CSE+EL + +D+ +M LP + P+G L+D L+L D + D+ +TPNRSDC+ + G+A Sbjct: 117 MLCSEEELGIGEDTTGVMILPPNLPLGEDLADVLDLKDTVFDIGITPNRSDCLSIIGVAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 ++ A LK I ++E I + + D LC + ++ V +P WMR Sbjct: 177 EIAAITGKPLKLPEIYVTENAEDIQVSASVQILDPDLCPHYTARMIRDVVVGPSPQWMRL 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEY 295 RL+AVGLRSIS +VD+TN+V ++ G P H FD + + + VRR+ GEK ++LD +E Sbjct: 237 RLEAVGLRSISNVVDVTNFVMMELGQPLHAFDYRFLEEGRIVVRRSTEGEKFISLDEKER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ + ++I + +IAGI+GG ++ +T D+L+E A + P +I RS ++LG+ TD Sbjct: 297 VLNANTLMICDGVKPVAIAGIMGGFNSEIKPDTRDILLESAYFAPSSIRRSARDLGMSTD 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR------KIVFMNS 409 + +RFERG+D +G++ L LI L GG IC R I P+ +I Sbjct: 357 AAFRFERGIDPEGVLRALDRAAQLIAELSGGK---ICKGR-IDEHPKPVETVGEIHLRCR 412 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V L G ++P + IL LG V G +++ + PS+R D+ + DLVEEI RI Sbjct: 413 KVNSLLGTNIPAAEMADILRGLGMEVTAKEGTVEEYRIKPPSFRVDIGREIDLVEEIARI 472 Query: 467 YGVDQIKSEPLPLTQVE----DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS- 521 +G D I LP+ +E D+R + ++ ++R LA EV+ +SF+S + Sbjct: 473 HGYDNIPVS-LPVGAMEPVPRDRRKILEER-----LRRHLAGTGFSEVITYSFVSPTAAD 526 Query: 522 --VLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 L G +R + I NP++ D S MRT+L+ LLK N + D IFE+ ++ Sbjct: 527 ILALDAGDERRKVVRIKNPLTEDQSVMRTTLIYSLLKVMQENANAGDYDLKIFEIGKIFL 586 Query: 578 NDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 G +K A + G S E LWS E R +D +D K S+ + Sbjct: 587 QGNTGGLPTEKKRLACLMTGMSDKE----LWS-SGESR---LDFYDLKGVVESLFASL-N 637 Query: 635 LDSLRFESGA-PSWYHPGRS-GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 L +R+ S A ++ HPGRS GI I GY GE HP++L + N FE+ +D Sbjct: 638 LTGIRYCSDALQAFLHPGRSCGIFIDEKSI--GYMGEAHPDVLSRLDMKNRALIFEMDVD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFD 751 +I + + + S RD+AF++DQ + A ++NI N + L+++V +FD Sbjct: 696 AI---SELFSGSVTYKEFSRYPESSRDVAFVIDQDVEADGMLNIALNAREELLENVCIFD 752 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ G + EGKKS+ ++ + T DD++ + +IV+ ++ +T A +R Sbjct: 753 VYAGAGVPEGKKSLGLRFTYRSYSATLTDDEVSRVHSKIVQRIIDQTGARVR 804 >gi|212635794|ref|YP_002312319.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella piezotolerans WP3] gi|212557278|gb|ACJ29732.1| Phenylalanyl-tRNA synthetase, beta subunit [Shewanella piezotolerans WP3] Length = 795 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 268/817 (32%), Positives = 436/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ V+ E++ +T GLEV+ +D A S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVNREELAHQITMAGLEVDGIDAVAAEFSGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP DAP+G + +YL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDIESDGIIELPADAPIGKDVREYLDLNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P + +I +K +L C + +K V A P WM Sbjct: 180 -----GVLNRQTVTEPTWEAVTATISDAVKIELQAEQECARYLGRVIKNVDVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD +++ + VR+ EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDNAKLEGGIQVRKPVGEEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + ++IA + ++AG+ GG+H+G TTD+L+E A + P+ I + +G+ T Sbjct: 295 ITIPEGMLIIADSVKPLALAGVFGGEHSGVTTETTDILLECAFFAPLAILGKARKIGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 D+ +RFERGVD + V+ L+L +CGG A + A++ KP +IV S++ Sbjct: 355 DASHRFERGVDPELQHKVMDRASRLVLDICGGEAGPVVEAKSDDNLPKPVQIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R G + D ILERLGF+V ++ V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RTLGHHIEDNDVTEILERLGFAVEVTEGQWSVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + R V+ +L +R E V +SF+ +Q L + Sbjct: 475 PNIAPIAQLSMSDHNEADISLKR---VRSMLVARGFQEAVTYSFVDPKQQNLIHPNAEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYM 587 + NPIS +MS MR S+ GLL A G N R +FE + D+ Q+ M Sbjct: 532 ILPNPISVEMSAMRLSMFTGLLSAVGYNQSRQQNRVRLFETGLRFVPNASVDSGVAQEPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G+ E WS +S VD FD K D +VI V+ + F + Sbjct: 592 LAAVIAGNQNDEH----WSMESNT----VDFFDLKGDLEAVIGLTVADNEFSFRAATHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + + V+G G HP + FGL+ FE+ LD++ ++ + +T Sbjct: 644 LHPGQCAEILRN-DRVIGIIGTVHPTLEKPFGLNGKTIIFELELDALLHAELPQAQT--- 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +VD+ + A +V +I+ V + + + +FDV+QGK + EGKKS+A Sbjct: 700 --VSKFPANRRDIAIVVDEAVAADDVVKLIRKVGENQLVGINLFDVYQGKGVEEGKKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +L+Q T + +I ++D +V + + NA LR Sbjct: 758 IALLLQDNTRTLEEKEIAEMVDVVVSALKDEFNASLR 794 >gi|51596660|ref|YP_070851.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 32953] gi|170024064|ref|YP_001720569.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis YPIII] gi|186895717|ref|YP_001872829.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis PB1/+] gi|66773894|sp|Q669Z6|SYFB_YERPS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|51589942|emb|CAH21574.1| phenylalanyl-tRNA synthetase beta chain [Yersinia pseudotuberculosis IP 32953] gi|169750598|gb|ACA68116.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis YPIII] gi|186698743|gb|ACC89372.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis PB1/+] Length = 795 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/814 (32%), Positives = 428/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATEGEELTLLDGTKVKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + E + G+ G HP + L+ FEV + + + + + Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|254235717|ref|ZP_04929040.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa C3719] gi|126167648|gb|EAZ53159.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa C3719] Length = 792 Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust. Identities = 277/815 (33%), Positives = 436/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGRRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIEREGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|254241192|ref|ZP_04934514.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa 2192] gi|126194570|gb|EAZ58633.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa 2192] Length = 792 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 277/815 (33%), Positives = 436/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRTYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGKRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIERDGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|313107808|ref|ZP_07793982.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa 39016] gi|310880484|gb|EFQ39078.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas aeruginosa 39016] Length = 792 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 277/815 (33%), Positives = 436/815 (53%), Gaps = 36/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ +GLEV+ + A S + +VLS E++PD D Sbjct: 1 MKFSEKWLRSWANPQVSHDELVARLSMVGLEVDADLPVAGAFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRAGLKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S+++A ++ELP DAPVG + YLEL D I+V LTPNR DC+ + G+A ++ Sbjct: 119 CSAKELQISEENAGLLELPADAPVGQDVRAYLELDDYTIEVGLTPNRGDCLSLAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A L + + + E+ P+E L + C + ++ V + P WM Sbjct: 179 SAIYDVPLAPVAVDAVAAQHDETRPVE----LAAPAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI +VD+TNYV ++ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDIRSIDPVVDVTNYVMIELGQPMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEI 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G D+T D+ +E A +D I +A ++ G+ TD Sbjct: 295 TLRADTLVIADHQRALAIAGVMGGEHSGVSDSTRDLFLEAAFFDTIALAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 S +RFERGVD Q ++ LIL + GG I + + P+ I V + Sbjct: 355 SSHRFERGVDSQLARKAMERATRLILDIVGGEPGPIVEQVSEAHLPKVAPITLRAERVTQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + +R+L+ L +V+ + + ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGMPLDAAEIVRLLQALELTVVADGEGQWSVGVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 KSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 P+ Q N ++ ++R+L +R E + +SFI LF G + L Sbjct: 475 ---PVRYPQARLAPNNKPEARAALPLLRRLLVARGYQEAITFSFIDPALFELFDPGTQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAA 589 + NPISADM+ MR+SL PGL+KA N++R + +FE + EG Q+ M A Sbjct: 532 TLANPISADMAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQL-EGLKQEAMLA 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G G EG W++ + VD FDAKAD +V+ +L F G H Sbjct: 591 GAICGRRLPEG----WANGRDG----VDFFDAKADVEAVLASAGALGDFSFVPGEHPALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ I+ +V GY G HP + L P+ FE+ L + K Sbjct: 643 PGQTARIEREGRLV-GYLGALHPELAKKLDLEQPVFLFELLLAEVVDGH-----LPKFRE 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +VDQ +PA ++ I+ + D+ +FDV+ GK + +KS+A+ Sbjct: 697 LSRFPEVRRDLALLVDQDVPAQDILTQIRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T DD++ IV ++ ++ NA LR Sbjct: 757 LTWQHPSRTLNDDEVNSTTQNIVTSLEERFNATLR 791 >gi|153950288|ref|YP_001400694.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pseudotuberculosis IP 31758] gi|152961783|gb|ABS49244.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pseudotuberculosis IP 31758] Length = 795 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/814 (32%), Positives = 428/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATEGEELTLLDGTKVKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVMDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + E + G+ G HP + L+ FEV + + + + + Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|294141286|ref|YP_003557264.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella violacea DSS12] gi|293327755|dbj|BAJ02486.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella violacea DSS12] Length = 795 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 434/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S +++ +T GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSISRDELSHQITMAGLEVDGVEGVAGEFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G+ + I +VCGAPN R+GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKINVGQDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GNFKIKKAKLRGEPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ DS I+ELP DAP+G + +YL L D IIDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGINIDSDGILELPTDAPLGADIREYLSLEDVIIDVDLTANRADCLGMSGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L ++ P + +P IK DL C + VK + +P W+ Sbjct: 180 -----GVLNRQAVTEPTWEKVVPTIDDSIKIDLQAPESCARYLGRVVKNINVKAQSPLWI 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD +++S + VR EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLSGDIQVRMGTGDEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VI+ + ++AG+ GG+++G + T D+L+E A + P+ I + G+ T Sbjct: 295 ITIPDDMLVISDQEKSLALAGVFGGEYSGVNSETKDILLECAFFAPLAILGKTRRFGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ + KP I S++ Sbjct: 355 DSSHRFERGVDPELQHKVMDRATRLVLDICGGEAGPVVEAKSDEHLPKPVSITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + ++ IL+RLGF+V D++ V ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHISDDEVTEILQRLGFAVEFTADQWNVVTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + R V+ +L +R E + +SF+ + G + Sbjct: 475 PNIAPVGSLSMPDHNESDISLKR---VRSMLVARGFQEAITYSFVDPKLQDKVHPGCEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS +MS MR SL GLL A G N R +FE + DT Q+ M Sbjct: 532 VLPNPISIEMSAMRLSLFTGLLSAVGHNQSRQQNRVRLFETGLRFVPDTSADANVRQEPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G+ E WS +S + D FD K D ++I VS + F S Sbjct: 592 LAAVISGNQNDEH----WSMES----KTADFFDLKGDLEAIIGLTVSDEEFTFRSATHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + + V+G G HP++ F L+ FE+ L+++ K + Sbjct: 644 LHPGQCAEILRNDQ-VIGIIGTVHPSLEKPFALNGRTIVFELELNAL-----LHAKLPQA 697 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +VD ++ AG +V +I+ V ++L+ + +FDV+QGK + GKKS+ Sbjct: 698 QAVSKFPANRRDIAIVVDDNVSAGDVVKMIRKVGQNQLV-GINLFDVYQGKGVEPGKKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q T + +I ++D +V + + NA+LR Sbjct: 757 AIALTLQDNTRTLEEKEIAEMVDSVVSTLKSEFNALLR 794 >gi|15602494|ref|NP_245566.1| phenylalanyl-tRNA synthetase subunit beta [Pasteurella multocida subsp. multocida str. Pm70] gi|13431893|sp|P57859|SYFB_PASMU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|12720903|gb|AAK02713.1| PheT [Pasteurella multocida subsp. multocida str. Pm70] Length = 795 Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 438/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SW+++ ++ +S ++CD +T +GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFSESWVREWVNPAISTAQLCDQITMLGLEVDGVEKVAGDFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S+ I+ELP +APVG L DYL L D +++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVESSGIIELPQNAPVGTNLRDYLTLDDNTVEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + ++ ++ P +I ++ L C + + VK V +P W+ Sbjct: 180 -----GVVNKLAVNTPHFESVKATITDKVDIQLHAPEACPRYLLRVVKNVNVQAPSPMWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VD+TNY+ L+ G P H FDA++++ + VR A SGE ++ LD Sbjct: 235 QEKLRRCGIRSIDPVVDVTNYILLELGQPMHAFDAAKVAQPVQVRMAKSGEALVLLDGST 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + ++IA ++AGI GG+ +G + T D+++E A + P+ IA + G+ T Sbjct: 295 AKLKDNTLLIADQNGPLAMAGIFGGQASGVNAETKDIILEAAFFAPLAIAGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 DS +RFERGVD + ++ +L++ +CGG DIC + + P+ ++ ++ Sbjct: 355 DSSHRFERGVDFELQRQAMERATALLVEICGGEVGDICEVASDAFLPKLNQVSLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E IL RLG V D ++V+ SWR D+E + DLVEEI RIYG + I Sbjct: 415 ALLGHHIETETVTDILTRLGLQVSYANDVWQVTSASWRFDIEIEEDLVEEIARIYGYNSI 474 Query: 473 KSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQRE 530 ++ PL ++ + + L +R +K L E + +SF+ K QSVL Q Sbjct: 475 PNKAPLAHLRMREHKEADLDLAR---IKTALVDADYQEAITYSFVDPKIQSVLH-PQQDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SLL GLL A N +R +FE + DT Q++ Sbjct: 531 LVLPNPISVEMSAMRLSLLSGLLGAVQYNQNRQQTRVRLFETGLRFIPDTQAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + A + G+ E W+ K+E VD FD K D S++ + + ++F + + Sbjct: 591 VLAAVMTGNKKAEH----WAGKAES----VDFFDLKGDLESILSLTGTRNLVKFVAKSYP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I + E + G+ G HPN GL+ FE+ +I Q + K Sbjct: 643 ALHPGQSAAIMLNGEEI-GFIGTLHPNAAKQLGLNGKTVVFEILWQAIATRQVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RDLA +V + + A +++ + V + V +FDV+QG + EG KS+ Sbjct: 699 --EISRFPANRRDLAIVVAESVAASDVLDACREVAGETLTQVNLFDVYQGNGVAEGHKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI ++IQ + T +DDI ++ ++ + ++ NA LR Sbjct: 757 AISLIIQDNEKTLEEDDINAVVSVVLSELKQRFNAYLR 794 >gi|332968850|gb|EGK07897.1| phenylalanyl-tRNA synthetase beta subunit [Kingella kingae ATCC 23330] Length = 784 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 248/801 (30%), Positives = 433/801 (54%), Gaps = 38/801 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F+ +WLK + ++S +++ LT GLEVE+++ S + +V SVE++PD D Sbjct: 1 MQFSYTWLKTQANPNLSADQLSHLLTMAGLEVEELNAAAPDFSGVVVAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + IQ+VCGAPNV+VG+ A P + +P N+ + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELIQIVCGAPNVKVGIKVPCALPNALLP-NDFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D ++ LP +APVG + ++L+L D I + +TPNR+DC+ ++GIA ++ Sbjct: 120 CSAKELGLEDKVDGLLVLPENAPVGQNIREFLDLDDAIFTLKITPNRTDCLSIKGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWMRQR 237 A + I I+ + + ++ D + C F + GV V+P+W+ QR Sbjct: 180 SALTQCEFNPIQINHIATQTTQKQAVQIDAPND--CGRFISRVISGVNATAVSPDWLVQR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSIS LVDI NYV L+ G P HVFDA +IS L VRRA +GE + L+ + L Sbjct: 238 LERSGIRSISPLVDIGNYVMLEIGQPMHVFDADKISGSLHVRRAKNGEVLDCLNEKTVTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + +VIA + + SIAG++GG + D T ++++E A ++P+ I+ + G +DS Sbjct: 298 ADNTLVIADEQQALSIAGLMGGVASAVSDETKNIVLEAAWFNPLIISGKSRQYGFGSDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERGVD + ++ L++ +CGG +I + + + V+++ G+ Sbjct: 358 FRFERGVDSELQRDAIERATELVVQICGGEVGEIVEVLGDLPTAKTVEVRTARVEKVLGV 417 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI----K 473 + + IL+ LG D F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 SIENQRIETILQHLGLQPEKTADGFRVTAPSFRYDIEIEADLIEEIARVYGYENIPDDYT 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 S L + ++ + R+ +R+ V + +A+R EVV+++F+ ++ F Q + Sbjct: 478 SGKLAMLKLPENRH-------SRFGVYQKMAARGFQEVVSYAFVDEQWEQDFANNQDPIR 530 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-QKYMAAGI 591 + NP++A + MR++L+ GL++ N++R +FE++ ++ + + Q G+ Sbjct: 531 LQNPLAAQYAVMRSTLMGGLIEILQNNLNRKQNRVRVFEIARIFRKENNQFVQTERVGGL 590 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GS+ E W +KS VD +D KAD +E + + F S HPG Sbjct: 591 VYGSALPEQ----WGEKSHP----VDFYDLKAD----VETLLRGKNAAFVKAEHSALHPG 638 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R I + +G GE HP + L FE+ +D++ ++K R + +S Sbjct: 639 RCAAIVVDG-VNVGIIGELHPKWTQKYDLPQAPLLFELDMDAVLTTEKVRYQA-----VS 692 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 +RDLAF++ +++ L + V+ +I + +FDV++G L E KS+A+++ Sbjct: 693 KFQAGRRDLAFVLPENVAFADLQAALGQVNNPIIQGIELFDVYRGAGLPENHKSLAVKIS 752 Query: 771 IQPLKDTFRDDDIRILMDRIV 791 +Q + T D+ + ++ ++ Sbjct: 753 LQDMNATLTDETVEPIIQELI 773 >gi|145598025|ref|YP_001162101.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis Pestoides F] gi|145209721|gb|ABP39128.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis Pestoides F] Length = 795 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/814 (32%), Positives = 428/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + E + G+ G HP + L+ FEV + + + + + Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|293396365|ref|ZP_06640643.1| phenylalanyl-tRNA synthetase [Serratia odorifera DSM 4582] gi|291421154|gb|EFE94405.1| phenylalanyl-tRNA synthetase [Serratia odorifera DSM 4582] Length = 795 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 429/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ VS E + D +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVSSEALSDQITMAGLEVDGVEPVSGAFNGVVVGQVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRSGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPEDAPIGSDIREYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L ++S ++ S L I+ + ++ C + +KG+ P WMR++ Sbjct: 180 GVLNQQALTLPDMSPVAATISDTLPIRIEAPEA--CPRYLGRVIKGINVKAPTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD SRI+ + VR A GE + LD + L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLSRIAGGIVVRMAHEGETLTLLDGSQAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T DVL+E A + P++IA + G+ TD+ Sbjct: 298 NADTLVIADHQQALAMGGIFGGEHSGVNDATQDVLLECAFFSPLSIAGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++++CGG + N + P++ I ++ RL Sbjct: 358 HRYERGVDPALQYQAMERATRLLVAICGGQVGPVIDVTNESSLPKRATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V + + ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 418 GHPVPSEQVSDILRRLGCEVSEQGENWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 P+ + +L + + R + VK +L E + +SF+ + L + Sbjct: 478 PV-------RADLEMTKHREADLTLKRVKTLLVDHGYQEAITYSFVDPKVQALLHPNEDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + +PIS +MS MR SL GLL A N +R +FE + D+ Q Sbjct: 531 LILPSPISVEMSAMRLSLWTGLLSAVVYNQNRQQTRLRLFESGLRFVPDSTANLAIRQDV 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G + E W + VD +D K D SV+E L ++F+S A Sbjct: 591 MLAGVIAGHTHDEH----WDLARKP----VDFYDLKGDLESVLELTGKLSDIQFKSEANP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 643 ALHPGQSAAIYLHGERI-GFIGVVHPELERKLDLNGRTVVFELEWNKVATRVVPQAR--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGDKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLVLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|307256635|ref|ZP_07538415.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864883|gb|EFM96786.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 795 Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust. Identities = 272/821 (33%), Positives = 435/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ SR R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVSRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|28869580|ref|NP_792199.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato str. DC3000] gi|38258469|sp|Q883H7|SYFB_PSESM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28852822|gb|AAO55894.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato str. DC3000] Length = 792 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 276/821 (33%), Positives = 436/821 (53%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGIFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + QVVCGAPNVR GL +A GS +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGR-ETFQVVCGAPNVRPGLKIPFAMIGSELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + + +S + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAADVTRPQIAAVSA-VHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLDITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P E K +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPQANAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GVKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFTPGQ 637 Query: 645 PSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPALHPGQTARILRDGREV--GFLGAIHPELSKNLGLDRPVFVFELVLAEVATG-----R 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 LPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|45442005|ref|NP_993544.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis biovar Microtus str. 91001] gi|45436868|gb|AAS62421.1| phenylalanyl-tRNA synthetase beta chain [Yersinia pestis biovar Microtus str. 91001] Length = 795 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/814 (32%), Positives = 427/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATHLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + E + G+ G HP + L+ FEV + + + + + Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV+ GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYSGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|320324307|gb|EFW80386.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. glycinea str. B076] Length = 792 Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust. Identities = 273/824 (33%), Positives = 432/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRAYLSLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD + ++ L+L + GG A I + + P + Sbjct: 350 GLHTDASHRYERGVDWELAREAMERATGLLLEITGGEAGPITEVVSEQHLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLGLAVTTEADGQWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + G+ P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGVDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|254447179|ref|ZP_05060646.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium HTCC5015] gi|198263318|gb|EDY87596.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium HTCC5015] Length = 790 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 428/816 (52%), Gaps = 40/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WL+++++ D+S E + + LT +GLEV+ ++ A S + +++ +E +PD D Sbjct: 1 MIISEQWLREYVNPDLSTETLAERLTMLGLEVDGIELAAPAFSGVVVGEIVEIEAHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + G +QVVCGA N GL +A G+ +P + + K+RG+ES GM+C Sbjct: 61 KLRVCQVAGGDDVVQVVCGAKNAAKGLKVPFAMVGAKLP-GDFKIKRAKLRGVESLGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 + EL L++ S + ELP DAPVG +YL L D +I+V LTPNR DC+ + G+A ++ Sbjct: 120 AAAELGLAESSEGLYELPDDAPVGTDFREYLSLDDALIEVDLTPNRGDCLSMVGVAREV- 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGV-RNNVAPNWM 234 G + ++ P + E+I +I L + + C +A ++GV P W+ Sbjct: 179 ----GTVTHQAVNYP-ALEAIEAQIDETLPIRIEAADACPRYAGRVIRGVDAAATTPLWL 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R +SA+VDITNYV L+ G P H FD ++ + VR+A E + LD E Sbjct: 234 SERLRRAGVRPLSAVVDITNYVMLELGQPMHAFDLDKLEGGIVVRKAADQEALTTLDGNE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L ++VIA + + ++AG++GG+ D+T V +E A +D +A + G+ T Sbjct: 294 LSLKEGSLVIADEAKAVALAGVMGGEQTAVADSTAAVFLESAFFDTDAMAGEARRYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMNSE-VK 412 DS +RFERGVD Q ++ LIL +CGG + + + P R V + +E ++ Sbjct: 354 DSSHRFERGVDPQLQERAIERATQLILEICGGQPGPVSLEHDEQKVPQRPAVQLRAERIE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G+ ++ + IL+RLG V + + V+ PS+R D+ +ADL+EE++RIYG D++ Sbjct: 414 RLLGLRFEKQEVVDILQRLGMGVAVLEEGWRVTPPSFRFDINIEADLIEELVRIYGYDRV 473 Query: 473 ---KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + P Q D+ +Q RY K VL R E + +SFI+ + F Sbjct: 474 PRTSAAASPAIQRRDEAARPVQ----RY-KEVLVERGYQEAICYSFIAPDWFKRFDPDGE 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-QKYMA 588 + + NPIS+++ MR+SL+PGL+K N++R +FEV + + E QK Sbjct: 529 AIALANPISSELGVMRSSLVPGLVKTLQYNLNRQQKRLKLFEVGLSFVSQGSETVQKNKI 588 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G + ++ R VD FDAK D +++ +D+ RFE+ S Sbjct: 589 AGLL--------CGEILPEQWNHEARAVDFFDAKGDVEALL-ALTGIDNYRFEAADLSIL 639 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + +GY G HP + L FE+ + +I + + K Sbjct: 640 HPGQSAFIVRDG-VRIGYVGALHPQLARGIKLKQRTFVFELDIAAI-----QTGRVAKFE 693 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 LS +RD+A +VD + A L++ + D + V VFD++QG++L G KSVA+ Sbjct: 694 GLSEFPATRRDIAVVVDAEVSAQQLIDAVMASDVPQLQSVRVFDLYQGENLKAGSKSVAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T + +I ++R V + K A LR Sbjct: 754 GLILQDFSSTLTEQEIEAAVERAVAGLENKVGAALR 789 >gi|22125802|ref|NP_669225.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis KIM 10] gi|108807767|ref|YP_651683.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis Antiqua] gi|108812044|ref|YP_647811.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis Nepal516] gi|149365664|ref|ZP_01887699.1| phenylalanyl-tRNA synthetase beta chain [Yersinia pestis CA88-4125] gi|162419014|ref|YP_001607027.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis Angola] gi|165927451|ref|ZP_02223283.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165939500|ref|ZP_02228046.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|166011814|ref|ZP_02232712.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166211101|ref|ZP_02237136.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|167400839|ref|ZP_02306345.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422179|ref|ZP_02313932.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424893|ref|ZP_02316646.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|218929516|ref|YP_002347391.1| phenylalanyl-tRNA synthetase subunit beta [Yersinia pestis CO92] gi|229837953|ref|ZP_04458112.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898514|ref|ZP_04513659.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229902355|ref|ZP_04517475.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|270490463|ref|ZP_06207537.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294503570|ref|YP_003567632.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|30316262|sp|Q8ZDX1|SYFB_YERPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21958728|gb|AAM85476.1|AE013793_12 phenylalanine tRNA synthetase, beta-subunit [Yersinia pestis KIM 10] gi|108775692|gb|ABG18211.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis Nepal516] gi|108779680|gb|ABG13738.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis Antiqua] gi|115348127|emb|CAL21055.1| phenylalanyl-tRNA synthetase beta chain [Yersinia pestis CO92] gi|149292077|gb|EDM42151.1| phenylalanyl-tRNA synthetase beta chain [Yersinia pestis CA88-4125] gi|162351829|gb|ABX85777.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis Angola] gi|165912549|gb|EDR31180.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. IP275] gi|165920506|gb|EDR37783.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. F1991016] gi|165989279|gb|EDR41580.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. E1979001] gi|166208281|gb|EDR52761.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. B42003004] gi|166958991|gb|EDR56012.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049692|gb|EDR61100.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056080|gb|EDR65858.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680690|gb|EEO76786.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis Nepal516] gi|229688062|gb|EEO80133.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. India 195] gi|229694319|gb|EEO84366.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis biovar Orientalis str. PEXU2] gi|262361612|gb|ACY58333.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis D106004] gi|262365647|gb|ACY62204.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis D182038] gi|270338967|gb|EFA49744.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis KIM D27] gi|294354029|gb|ADE64370.1| phenylalanyl-tRNA synthetase beta subunit [Yersinia pestis Z176003] gi|320015083|gb|ADV98654.1| phenylalanine tRNA synthetase, beta subunit [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 795 Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/814 (32%), Positives = 427/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + E + G+ G HP + L+ FEV + + + + + Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV+ GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYSGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + + VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|294781819|ref|ZP_06747152.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] gi|294481929|gb|EFG29697.1| phenylalanyl-tRNA synthetase, beta subunit [Fusobacterium sp. 1_1_41FAA] Length = 799 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 445/819 (54%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D S+E+I + LT IG EVE +D + + L I +++ +++P+ D Sbjct: 1 MLISLNWLKQYVDIKESVEEIANALTMIGQEVEAIDIQGKDLGNVVIGQIVEFDKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L+++ G+ +Q++CGA N ++ V A G+ +P N + KIR +ES GM+ Sbjct: 61 RLTLLKVNVGEEAPLQIICGATNHKLNDKVVVAKIGAVLP-GNFKIKKSKIRDVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL L+ +S I+ LP DAP+G +Y L+D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSDAELGLAKESEGIIILPEDAPIGKEYREYAGLNDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + ES+ IK +++D CK + +K V+ +P W++ R+ Sbjct: 180 AAYYNRKVKYPVIEMAETIESVNTVIKVNIEDKDRCKRYIGRVIKNVKIKESPEWLKARI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +A+GL I+ +VDITN+V + P H FD ++ +T+R A E+I LD E L Sbjct: 240 RAMGLNPINNVVDITNFVMFEYNQPMHAFDLDKVEGNITIRAAKENEEITTLDGVERVLK 299 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 +VIA D + +I G+IGG++ D +T ++ VEVA + P NI + ++LGI TDS Y Sbjct: 300 NGELVIADDEKAIAIGGVIGGQNTQIDSDTKNIFVEVAYFTPENIRKESRDLGIFTDSAY 359 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 R ERG+D++ + V+ VSL+ + G I + + R + +N E + + G Sbjct: 360 RNERGMDIENLAVVMNRAVSLLAEVAEGEVLSEVIDKYVEKPKRAEISLNLEKLNKFIGK 419 Query: 418 DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + E+ +IL L + +G+ + PS+R D+ AD+ EE++R+YG + I+++ Sbjct: 420 TLTYEEVGKILTHLDIELKPLGDGTMLLIP-PSYRADLTRPADIYEEVIRMYGFENIEAK 478 Query: 476 PLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E + N + + SR V+ +L + EV+N+SFI K LF G+ +EI Sbjct: 479 -MPVMSIESGEENTNFKISRI--VREILKELGLNEVINYSFIPKFTKELFNFGEEVIEIK 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DM+ MR +LL L+ N++R D +FE+S ++ EGQ +A I Sbjct: 536 NPLSEDMAVMRPTLLYSLIANVRDNINRNQTDLKLFEISKTFKK-LGEGQNGLA--IEDL 592 Query: 595 SSGIEGSGR----LWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESGAPSW 647 + SGR LW ++S+ F DL + + L+V + SL L Sbjct: 593 KIALILSGREEKNLW-NQSKSDYNFYDLKGYLEFLLERLNVTK--YSLTRLTNNKN---- 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKTKK 706 +HPG S IK E V+G GE HPN++++FG+ F E+ L S+ K K K Sbjct: 646 FHPGASAEIKI-GEDVIGVLGELHPNLVNYFGIKREKVFFAELNLTSLL----KYIKIKV 700 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 S +P V RDLA +D+ + G +V IK LI+ + +FDV+ G + + KKSV Sbjct: 701 NYETISKYPEVLRDLAITLDRAVLVGEMVKEIKKKVNLIEKIDIFDVYSGDKIDKDKKSV 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ ++++ T D+DI M I+E + K N +R Sbjct: 761 AMSIVLRDKNRTLTDEDIDKAMTAILELIKDKYNGEIRK 799 >gi|190149924|ref|YP_001968449.1| phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303251010|ref|ZP_07337197.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307249813|ref|ZP_07531790.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252163|ref|ZP_07534062.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261069|ref|ZP_07542749.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263248|ref|ZP_07544868.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915055|gb|ACE61307.1| phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302650141|gb|EFL80310.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306858163|gb|EFM90242.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306860463|gb|EFM92477.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869246|gb|EFN01043.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871465|gb|EFN03189.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 795 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 435/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|307245470|ref|ZP_07527558.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853811|gb|EFM86028.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 795 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 435/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELSIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|330967293|gb|EGH67553.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. actinidiae str. M302091] Length = 792 Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust. Identities = 275/821 (33%), Positives = 435/821 (52%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGIFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + +I + E P+E+ ++ C + ++ V + P WM Sbjct: 179 GALYAADVTR-PQIAAVSAVHDEVRPVEVL----AAAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P E K +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPRANAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GVKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFTPGQ 637 Query: 645 PSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPALHPGQTARILRDGREV--GFLGAIHPELSKNLGLDRPVFVFELVLAEVATG-----R 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 LPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|127513143|ref|YP_001094340.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella loihica PV-4] gi|126638438|gb|ABO24081.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella loihica PV-4] Length = 795 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 268/822 (32%), Positives = 442/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S + + +T GLEV+ VD S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSISRDDLSHQITMAGLEVDGVDPVAGDFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G+ + I +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGQDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP+DAP+G + +YL+L+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDIESDGIIELPLDAPIGQDVREYLDLNDVVIDVDLTANRADCLGMVGLAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + P + SI I+ D S C + VK V +P WM Sbjct: 180 -----GVLNRQAVVAPTWEAVTPSIEDAIEIDNQAPSACPRYLGRVVKNVNVKAQSPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD ++I + +R EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKIDGKIQIRLGDGEEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VIA + + ++AG+ GG+++G T D+L+E A + P+ I + LG+ T Sbjct: 295 ITVPNDTLVIADNSQPLALAGVFGGEYSGVTGETQDILLECAFFAPLAIMGKSRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + ++ + +P I+ S++ Sbjct: 355 DSSHRFERGVDPELQHKVIDRATRLVLEICGGEAGPVVESKADEHLPQPANILLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + D ILERLGF V D ++V ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RVLGHHIADADVTEILERLGFGVSRVDDNWQVVTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 ------KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + +PL ++ ++ L++ V+ ++ +R E V +SF+ + L Sbjct: 475 PNVAPVAALSMPL---HNESDIDLKR-----VRAMMVARGFQEAVTYSFVDPKLQQLVHP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG- 583 G + + NPIS +MS MR S+ GLL A G N R +FE V + + G Sbjct: 527 GSDAMVLPNPISVEMSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPDANAESGV 586 Query: 584 -QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ M + G+ E WS +S + VD FD K D ++I VS D F+ Sbjct: 587 RQQAMLGAVIAGNQNDEH----WSMES----KTVDFFDLKGDLEAIIGLTVSEDEFTFKK 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPG+ I + + V+G G HP++ FGL+ FE+ LD++ + + Sbjct: 639 ASHPALHPGQCAEILRN-DRVIGVIGAVHPSLEKPFGLNGKTIVFELELDALLHASLPQA 697 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +T +S +RD+A +VD+ + AG +VN+I+ V + + + +FDV+QGK + G Sbjct: 698 QT-----VSKFPANRRDIAILVDEDVSAGNVVNLIRKVGENQLVGLNLFDVYQGKGVEPG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q T + +I +++++V + + NA+LR Sbjct: 753 KKSLAIALTLQDNARTLEEKEIAEMVEKVVSELKTEFNALLR 794 >gi|270158046|ref|ZP_06186703.1| phenylalanyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] gi|289163686|ref|YP_003453824.1| Phenylalanyl-tRNA synthetase, beta subunit [Legionella longbeachae NSW150] gi|269990071|gb|EEZ96325.1| phenylalanyl-tRNA synthetase beta subunit [Legionella longbeachae D-4968] gi|288856859|emb|CBJ10670.1| Phenylalanyl-tRNA synthetase, beta subunit [Legionella longbeachae NSW150] Length = 793 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 268/816 (32%), Positives = 436/816 (53%), Gaps = 37/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ +S +++ LT GLEV+ V S + +VLS + +P+ D Sbjct: 1 MKLSKLWLREWVNFSLSEQELASQLTMAGLEVDAVSPVAGEFSHVIVAEVLSTKPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ + +Q+VCGA NVR GL A G+ +P + K+RG S GM+ Sbjct: 61 KLTLCEVNANTGKALQIVCGASNVRAGLKVALAMIGARLP-GGFNIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +++ S IMEL DAPVG L +YL L D I+D+ LTPNR+DC V G+A ++ Sbjct: 120 CSVSELGMAEQSDGIMELESDAPVGMDLREYLTLDDHILDIDLTPNRADCFSVLGVAREV 179 Query: 179 VAAGLGKL----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 A L KL KEI+ P SI + L+ C + ++ + + P W Sbjct: 180 --AVLNKLPLLEKEISAITP----SIDDIVTIKLNSPDACSRYCGRVIRKINTKASTPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ G+R++ +VD+ NYV L+ G P H FD S I+ + VR + E++ LD Q Sbjct: 234 MSERLRRSGIRTVHPVVDVMNYVMLELGQPMHAFDLSAINGEINVRYSNQQERLELLDGQ 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ +VIA R ++AGI+GG+ + +TTDV +E A ++PI IA + G+ Sbjct: 294 KLTLNEKVLVIADQDRPLAMAGIMGGEASSVQVHTTDVFLESAFFNPIVIAGVARKFGLF 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF-MNSE-V 411 +DS RFERGVD I L+ +LIL + GG + + A N P K+ F N+E V Sbjct: 354 SDSSQRFERGVDPGLQIKALERATALILEIAGGESGPVIEACNQDNLPSKVHFSFNTEKV 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRIYGVD 470 K+L+G+++ +E+ R L+ LG +V E + F EVS+PS R D++ DLVEEI+R+YG D Sbjct: 414 KKLTGLNISLEEIKRFLDGLGITVTREQNHFLEVSIPSHRFDIQRDEDLVEEIIRLYGYD 473 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + +EP T V+ + ++ T + R AS+ E +++SF+ E + Sbjct: 474 NLHAEP-AYTLVQAGKTCGNEEIAT-ILARWFASKGYHETISYSFVDPEIQHELYPHKEF 531 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAA 589 +++LNPIS+++S MR + PGL+ + NV R + FE+ V++ + + ++ A Sbjct: 532 MQLLNPISSELSQMRAGMWPGLIASLIYNVHRQQNEVKFFEIGVVFDVHKSQLKERPCIA 591 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G+ G G WS E R D FD K D S+ + L + F + A H Sbjct: 592 GLLMGEQGSVN----WS----ETTRVHDFFDLKGDLQSLFAS-LKLKQVEFIAAAHEALH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S I + G+ G HP + D L++ + FE+ L+++ + R K Sbjct: 643 PGQSAQINING-TASGWIGTLHPRLADALDLNHDVLLFEINLEALIRQESPRYKP----- 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S ++RDL+F+VD + + ++++ + + + +FDV+ G+ + GKKS+AI Sbjct: 697 ISKYPQIRRDLSFLVDNDVEVMQIESVVRTIVQENWLKSFDIFDVYTGEGVPLGKKSLAI 756 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + IQ T D +I L++ I+ + K + +LR Sbjct: 757 SITIQDESRTLVDAEINSLINAIINTLENKFSIILR 792 >gi|330876794|gb|EGH10943.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 792 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 273/820 (33%), Positives = 433/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A ++ I+ + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAEVTRPQIAAVSAVHDEVRPVEVL----APTACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ TD Sbjct: 295 SLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ L+L + GG A + + + P + S V++ Sbjct: 355 ASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRASRVEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P E K +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQANAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQK 585 + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q+ Sbjct: 528 VKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-QE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFTPGQH 638 Query: 646 SWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 639 PALHPGQTARILRDGREV--GFLGAIHPELSKNLGLDRPVFVFELVLAEVATG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|289647151|ref|ZP_06478494.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 2250] Length = 792 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 274/824 (33%), Positives = 431/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A I + + P + Sbjct: 350 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPITEVVSEKHLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L L +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLCLAVTTEADGQWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLSVRYPQARLAPKAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|269122682|ref|YP_003310859.1| phenylalanyl-tRNA synthetase subunit beta [Sebaldella termitidis ATCC 33386] gi|268616560|gb|ACZ10928.1| phenylalanyl-tRNA synthetase, beta subunit [Sebaldella termitidis ATCC 33386] Length = 799 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 268/822 (32%), Positives = 439/822 (53%), Gaps = 41/822 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L+WLK ++D + +S+E++ +TLT IG EVEK++ + E+L +++ E +PD Sbjct: 1 MLISLNWLKQYIDLEGISIEELDNTLTMIGQEVEKIERQGESLGNIVTAQIVEKEMHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G ++ +Q+VCGA N + G V A G+ + + + KIRG+ES GM Sbjct: 61 DHLTVCKVDDG-NEVLQIVCGASNHKQGDKVVLARIGAVLG-GDFKIKKTKIRGMESFGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSEKEL LSD+ IM LP D G + DY L D I ++ +TPNR DC+ GIA + Sbjct: 119 LCSEKELGLSDNHDGIMILPEDTKTGIEIKDYFGLDDTIFELEITPNRPDCLSHIGIARE 178 Query: 178 LVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 L +L E I ++ D ++ K + VK V +P W+++ Sbjct: 179 LAVYYNKELHLPETKMHEKHFEKTENFIHIEIADETISKRYTSKIVKNVTVKESPEWLQK 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEY 295 RL ++G+RSI+ +VD+TN+V ++ G+P H FD S+I + VRRA GEK++ LD +E Sbjct: 239 RLNSIGIRSINNIVDVTNFVLMEMGHPIHAFDLSKIEGKKIIVRRAEDGEKVVTLDEKER 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+PD++VIA + ++ G++GG ++ D NT DVL+EVA ++P NI ++ K L + +D Sbjct: 299 KLNPDDIVIADGNKAVALGGVMGGYNSEIDSNTKDVLIEVAHFNPYNIRKTSKRLTLSSD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRL 414 + YRFERG+DL+ + V+ + LI GG I A + Y+ + F ++ Sbjct: 359 ASYRFERGIDLEDAVRVIDRVAELIQETAGGEILHGISEAYPVKYEETIVEFNMKRFEKF 418 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G ++ E + I E L +V + + ++ PS+R D+E + D EEI+RIYG D I+S Sbjct: 419 VGKEIEKERIIEIFENLEITVDDKGEVLLLTPPSFRNDLEREQDFYEEIIRIYGFDNIES 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF--GGGQRE 530 +P + R +L++ V + EV+N+SFI + + + + G Sbjct: 479 -VMPKLDINPIRIDTLREIDLLRSAAVAVGTGLREVINYSFIPRNALEKIRYNDAAGDEI 537 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYM 587 +E+ PI+ D MR +LL L+K N++R I D FE + + E E QK+ Sbjct: 538 IEVRKPITEDFVIMRPTLLYSLIKNAKDNINRNITDIRFFETTKTFKRVEGKIEEEQKF- 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES----- 642 GI G E +W+ K D +D K ++E S +RFE Sbjct: 597 --GIILGG---EPEKYIWNVKPVP----YDFYDLKG----IVEEIFS--KIRFEKYTLVR 641 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 YHPGR+ I E + G FGE HP++++ F L + E+ L+++ K Sbjct: 642 TTKESYHPGRAADIYVGKEYI-GTFGELHPDVMENFDLKKKLLTAELRLEALIKYSDKNI 700 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 K + + V RDLA +++++I G ++ I + +I+ V +FDV+QG + GK Sbjct: 701 FFKGI---NKFPAVPRDLALVIEENILVGDVIKSIAKLSPVIEKVELFDVYQGAGVEAGK 757 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KS+AI ++++ T +++I ++ +I+E V K A LR Sbjct: 758 KSIAISIVLREKNKTLEENEINSVISKILEKVKKDFGAELRQ 799 >gi|331016134|gb|EGH96190.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 792 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 273/820 (33%), Positives = 433/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A ++ I+ + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAAQVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ TD Sbjct: 295 SLRADTLVIADHQRALAIAGVMGGEHSGVRAGTRDIFLESAFFDTISVAGKARSYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD Q ++ L+L + GG A + + + P + S V++ Sbjct: 355 ASHRYERGVDWQLAREAMERATGLLLDITGGEAGPVIEVVSEQHLPSIAPVTLRASRVEQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG +++ Sbjct: 415 MLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNRL 474 Query: 473 -----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ P E K +L ++R+L +R E + +SFI + LF G Sbjct: 475 PVRYPQARLAPQANAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQK 585 + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q+ Sbjct: 528 VKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-QE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 587 PMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFAPGQH 638 Query: 646 SWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 639 PALHPGQTARILRDGREV--GFLGAIHPELSKNLGLDRPVFVFELVLAEVATG-----RL 691 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + +K Sbjct: 692 PKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHRK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 752 SLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|261339520|ref|ZP_05967378.1| phenylalanyl-tRNA synthetase, beta subunit [Enterobacter cancerogenus ATCC 35316] gi|288318333|gb|EFC57271.1| phenylalanyl-tRNA synthetase, beta subunit [Enterobacter cancerogenus ATCC 35316] Length = 795 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 267/816 (32%), Positives = 434/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++T + E + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNTTLDSEALSNQITMAGLEVDGVEPVSGAFTGVVVGEVMECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPLDAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 +L I ++ S L I+ + D+ C + VKG+ A P WM+++ Sbjct: 180 AVLNQTELNAPEIVPVEATISDTLPIQVEAADA--CPRYLGRVVKGINVKAATPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTNDATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V IL RLG V D++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHVADAQVSDILRRLGCDVTEGQDEWHAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + EV+ +SF+ + L GQ L Sbjct: 478 PVQAGLVMGSHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKLQQLIHPGQEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS++MS MR SL GLL N +R IFE + P+ Q + GIR Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTIVYNQNRQQNRVRIFESGLRF---VPDTQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G + ++ EE VD +D K D ++++ L + F + A Sbjct: 588 Q---DLMLAGAITGNRVEEHWDLAKGTVDFYDMKGDLEAILDLTGKLSEIEFRAEAIPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + V G+ G HP + F L+ FE L+ P++ + + + + Sbjct: 645 HPGQSAAIYLDGKRV-GFIGVVHPELERKFDLNGRTIVFE--LEWNPVADRVIPQAQDI- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA L K + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADILAECKKVGVNQVVGVNLFDVYRGKGVAEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|238753682|ref|ZP_04615044.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia ruckeri ATCC 29473] gi|238708234|gb|EEQ00590.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia ruckeri ATCC 29473] Length = 795 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 264/819 (32%), Positives = 434/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S +++ +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDELAHQITMAGLEVDGVEAVAGEFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DAP+G L DYL+ +D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPLDAPIGTDLRDYLQFNDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E +IS P+++ ++ P+ + D + C + VKG+ A P WM Sbjct: 180 AVVNQLVLTEPDIS-PVAATINDTFPIRV----DAAQACPRYLGRIVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD RI + VR A E++ LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDVDRIDGEIIVRMAAEAEELTLLDGTK 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ T Sbjct: 295 AKLSADTLVIADKQKALAMAGIFGGEHSGVNEETQNVLLECAFFNPLSITGRARRQGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD ++ L+L +CGG A + + P++ + ++ Sbjct: 355 DASHRYERGVDPALQHKAIERATRLLLDICGGEAGPVIDVTSAADLPKRATMTLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G VP E IL RLG V + D + PSWR D+E + DLVEE+ RIYG + I Sbjct: 415 RLIGHHVPAEQVSDILRRLGCQVTEQGDNWLAVAPSWRFDMEIEEDLVEEVARIYGYNNI 474 Query: 473 KSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P+ V K +LSL++ VK +L R E + +SF+ + L Q Sbjct: 475 PDVPVKADLVMTKHREADLSLKR-----VKTLLVDRGYQEAITYSFVDPKIQALLHPDQD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + +PIS DMS MR SLL GLL A N +R + +FE + D+ Q Sbjct: 530 PLVLPSPISVDMSAMRLSLLTGLLTAVVYNQNRQQSRLRLFESGLRFVPDSKAELGIRQD 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ +G + + + + VD +D K D +++E L ++F + + Sbjct: 590 VMLAGVI--------AGHRYEEHWDLARQPVDFYDLKGDLEAILELTGKLSDVQFRAESH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S HPG+S I + E + G+ G HP + L+ FE+ + + Sbjct: 642 SALHPGQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFELQWNKV-----ADRAVP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 + +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS Sbjct: 696 QASEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVIEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI +++Q T +++I + + VE + ++ A LR Sbjct: 756 LAISLVLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|238765300|ref|ZP_04626227.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia kristensenii ATCC 33638] gi|238696473|gb|EEP89263.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia kristensenii ATCC 33638] Length = 795 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 425/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + I V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVIGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +++D I+ELP DAP+G L +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAIAEDHDGIIELPADAPIGVDLREYLKLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L E +I P ++S P+ + D C + VKG+ A P WMR Sbjct: 180 AVLNQLPLTEPDIKPVVPSINDSFPIRV----DVPQACPRYLGRVVKGINVKAATPLWMR 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN+V L+ G P H FD RI + VR A GE++ LD + Sbjct: 236 EKLRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRIDAEIIVRLAAEGEELTLLDGTKV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD Sbjct: 296 KLNADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 + +R+ERGVD ++ L++ +CGG A + P++ I ++ R Sbjct: 356 ASHRYERGVDPALQHKAIERATRLLIDICGGEAGPVIDVTAPAELPKRATITLRREKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G +P E IL RLG V ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 416 LIGHHIPSEQVSDILRRLGCQVTEVGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIP 475 Query: 474 SEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 P+ V K NLSL++ VK L R E + +SF+ + L Q Sbjct: 476 DVPIKADLVMTKHREANLSLKR-----VKTALVDRGYQEAITYSFVDPKVQALLHPQQDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + +PIS +MS MR SLL GLL A N +R + +FE + D+ Q+ Sbjct: 531 LILPSPISIEMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDSKADLGVRQEV 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M A + +G + + + + +D +D K D +++E L ++F + A S Sbjct: 591 MLAAVI--------TGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHS 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I S E + G+ G HP + L+ FEV + + + Sbjct: 643 ALHPGQSAAIYLSGEHI-GFIGVVHPELERKLSLNGRTVVFEVQWNKL-----ADRAVPQ 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+ Sbjct: 697 ASEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + R VE + ++ A LR Sbjct: 757 AISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|32035257|ref|ZP_00135275.1| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208091|ref|YP_001053316.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae L20] gi|126096883|gb|ABN73711.1| phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 5b str. L20] Length = 795 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 434/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS +MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISNEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|254498716|ref|ZP_05111432.1| phenylalanyl tRNA synthetase, beta subunit [Legionella drancourtii LLAP12] gi|254352044|gb|EET10863.1| phenylalanyl tRNA synthetase, beta subunit [Legionella drancourtii LLAP12] Length = 793 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 257/812 (31%), Positives = 435/812 (53%), Gaps = 29/812 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ ++ ++ + LT GLEV+ V + + +VLS + +PD D Sbjct: 1 MKLSKLWLREWVNFSLTEHELAEQLTMAGLEVDAVSPVAGEFTHVIVAEVLSTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ Q +Q+VCGA NVR GL A G+ +P + K+RG S GM+ Sbjct: 61 KLTLCEVNINSDQPLQIVCGAANVRAGLKVALAMIGAVLP-GGFKIKESKLRGQLSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +++ S IMEL DAPVG L DYL L D +IDV LTPNR+DC V GIA ++ Sbjct: 120 CSVTELGMAEQSDGIMELEADAPVGMDLRDYLTLDDHVIDVDLTPNRADCFSVLGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L+E ++ ++ L I+ L + C + ++ + + P WM +R Sbjct: 180 AVLNKLPLQEPVVTPVIARIDDVLPIQ--LQNPEACAHYCGRIIRNINTQASTPLWMSER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R++ +VDI NYV L+ G P H FD + I + VR + E++ LD Q+ L Sbjct: 238 LRRSGIRTLHPVVDIMNYVMLELGQPMHAFDLATIKGGIQVRFSNEQEQLELLDGQDLTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + +VIA + ++AG++GG+ + +T DV +E A ++PI IA + G+ +DS Sbjct: 298 NENVLVIADQEKPLAMAGVMGGEASAVQAHTIDVFLESAFFNPIIIAGVARKFGLFSDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 R+ERGVD I L+ SLIL++ GG A + A+++ Y P K VF + +VK+L+ Sbjct: 358 QRYERGVDPYLQIKALERATSLILAIVGGDAGPVIEAKDMHYLPATIKFVFDSDKVKKLT 417 Query: 416 GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ + ++ +L +G +++ E + F+VSVPS R D+++ DLVEE++R+YG D +K+ Sbjct: 418 GLSISPKEMKELLTGIGITIVSERANLFDVSVPSHRFDIQQDVDLVEEVIRLYGYDNLKA 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 EP+ V+ + ++ TR + +S+ E +++SF+ + +++L Sbjct: 478 EPMT-APVQAGSVCANEEIATR-LAHWFSSKGYHETISYSFVDPQLQEEIYPQHEFMQLL 535 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRK 593 NPIS+++S MR + PGL+ + NV R FEV V++ + ++ AG+ Sbjct: 536 NPISSELSQMRAGMWPGLIASMIYNVHRQQNFIKFFEVGVVFDVKQQQLTERPCIAGLLT 595 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 G G WS E C F D FD K D S+ + L+ + F + HPG+S Sbjct: 596 GEQGSVN----WS----EPCHFFDFFDLKGDLQSLFGT-LKLNHVEFIAATHEALHPGQS 646 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 I+ + + G+ G HP + D L + + FE+ L ++ R KT +S Sbjct: 647 AQIQING-VFAGWIGTLHPRLADALDLQHDVLLFELNLAALAGYGAPRYKT-----ISKY 700 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 ++RDL+F+VD++I + + +++ + + VFDV+ G+ + E KKS+AI + + Sbjct: 701 PQIRRDLSFLVDKNISVKQIESAVRDTVTENWLKAFDVFDVYTGQGISESKKSLAIAMTL 760 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q T D +I L+ I++ + + + +LR Sbjct: 761 QDDSRTLVDTEINSLISAIIKTLENEFSIMLR 792 >gi|213970490|ref|ZP_03398617.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] gi|302062681|ref|ZP_07254222.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato K40] gi|302132638|ref|ZP_07258628.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213924661|gb|EEB58229.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas syringae pv. tomato T1] Length = 792 Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust. Identities = 275/821 (33%), Positives = 435/821 (52%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + + +S + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAADVTRPQIAAVSA-VHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLDITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + ++ P E K +L ++R+L +R E + +SFI + LF Sbjct: 474 LPVRYPQARLAPQANAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFELFSP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQ 584 G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D + Q Sbjct: 527 GVKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDGLK-Q 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 586 EPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTFAPGQ 637 Query: 645 PSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I++ E+ G+ G HP + GL P+ FE+ L + + Sbjct: 638 HPGLHPGQTARILRDGREV--GFLGAIHPELSKNLGLDRPVFVFELVLAEVATG-----R 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 691 LPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 751 KSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|303252239|ref|ZP_07338407.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247584|ref|ZP_07529628.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|302649022|gb|EFL79210.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855949|gb|EFM88108.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 2 str. S1536] Length = 795 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 271/821 (33%), Positives = 434/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIGPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVVKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSIHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|289623631|ref|ZP_06456585.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|330867700|gb|EGH02409.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 792 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 274/824 (33%), Positives = 431/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVL----APAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A I + + P + Sbjct: 350 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPITEVVSEKHLPSIAPVTLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L L +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 410 SRVEQMLGLVIENAEIERLLTGLCLAVTTEADGQWRVEVPSHRFDISLEVDLIEELARLY 469 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 470 GYNRLPVRYPQARLAPKAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 523 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 582 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 583 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 634 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 690 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 748 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 791 >gi|310777817|ref|YP_003966150.1| phenylalanyl-tRNA synthetase beta subunit [Ilyobacter polytropus DSM 2926] gi|309747140|gb|ADO81802.1| phenylalanyl-tRNA synthetase beta subunit [Ilyobacter polytropus DSM 2926] Length = 795 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 258/814 (31%), Positives = 434/814 (53%), Gaps = 29/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D + +++ +TLT IG EVE ++ + E L + +++ R+P+ + Sbjct: 1 MLISLDWLKQYVDIKENTKELENTLTMIGQEVEAIEVQGEDLDNVVVGQIVEYGRHPEAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++L+++ G+ + +Q+VCGAPN + G V A G+ +P + K+RGIES GM+ Sbjct: 61 KLSLLKVEVGEGEPLQIVCGAPNHKDGDKVVVAKLGAVLP-GEFKIKKAKVRGIESCGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + +D I+ LP DAPVG Y+ L D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSEVELGIGEDGEGIIILPEDAPVGEEYRKYIGLDDTIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K E I +++D CK + +KGV+ +P W+++RL Sbjct: 180 AAYYKRKVKYPKYEMDEVIEPASSHIHVNIEDKERCKRYCTRILKGVKIQESPEWLKKRL 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDL 297 +++GLR I+ +VDITN+V + +P H FD ++ + VR+A +GEKI+ LD +E +L Sbjct: 240 RSIGLRPINNIVDITNFVMFEYNHPMHAFDLDKLDGSKIIVRKAKTGEKIVTLDEEEREL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA + + +IAGI+GG D+ TTD+L+EVA + P NI ++ K+LG+ +DS Sbjct: 300 NNGELVIADEKKPVAIAGIMGGLDTKVDEETTDILLEVAYFTPENIRKTSKSLGLSSDSS 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFMNSEVKRLSG 416 YRFERG+D + I V+ L+ + GG + + + Y+ ++ ++ + G Sbjct: 360 YRFERGIDRENSIEVIDRAAKLMKDIAGGEILSGIVEKYVEKYEKIELTLDIDKLNKFVG 419 Query: 417 IDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS- 474 ++ +E IL LG + K V PS+R D+ ADL EE++R+YG + I+ Sbjct: 420 KEISVETVGEILRNLGLEIKALVGKILTVCPPSYRSDLVRTADLYEEVIRMYGFENIEDV 479 Query: 475 --EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E V+D ++ + VK VL + EV+N+SFI + + Sbjct: 480 MPEANIKAGVKDPETEAVDK-----VKLVLKKLGLQEVINYSFIPSDAVSKLKMNVETMA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 I NPI+ D++ MR +L+ GLL N +R D +FEVS + + + + + Sbjct: 535 IKNPINEDLAVMRPTLIYGLLSNIRDNFNRNQFDLKLFEVSRTFTSSEELANEEVKIAV- 593 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 SG LW+ K E D FD K +E ++ ++ + +HPGR Sbjct: 594 -AVSG-RAEKDLWNSKPEA----YDFFDIKGYVEGFLE-YMGINRFQLARTNNPTFHPGR 646 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHL 710 S I+ + V+G FGE HP++ + + + LD I I + K + K +++V Sbjct: 647 SAEIRMGKD-VIGSFGEIHPDVAEAMDIKKE-RAYIAELDLIKILKYGKSKIKYERIVKF 704 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 + V RDLA ++D I G ++ IK ++I+ V +FDV+QG + GKKSVAI ++ Sbjct: 705 PA---VTRDLAIVLDGDILVGDMLGDIKKSSKIIESVELFDVYQGDKVESGKKSVAINIV 761 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++ T + +I +++I++ + KK +R Sbjct: 762 MRKSNGTLEEKEITEGVEKILQTIRKKYKGEIRQ 795 >gi|83647267|ref|YP_435702.1| phenylalanyl-tRNA synthetase subunit beta [Hahella chejuensis KCTC 2396] gi|93140699|sp|Q2SDJ7|SYFB_HAHCH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83635310|gb|ABC31277.1| phenylalanyl-tRNA synthetase, beta subunit [Hahella chejuensis KCTC 2396] Length = 790 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 263/818 (32%), Positives = 439/818 (53%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ +D +S E + +T GLEV+ + + S + +VLSVE +PD D Sbjct: 1 MKFSEYWLREWVDPQLSSEALVQQITMAGLEVDAAERVAKPFSGIVVGEVLSVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ +E QVVCGAPNV G+ +A G+ + + + K+RG+ES GM+ Sbjct: 61 KLRVCKVSDGQ-EEFQVVCGAPNVAAGMKVPFAKIGAVL-SGDFKIKKAKLRGVESQGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L++ S +M L DAPVG + YL+L D IIDV LTPNRSDC+ + G+A ++ Sbjct: 119 CSEEELTLAEKSDGLMPLAADAPVGVDVRSYLKLDDNIIDVDLTPNRSDCLSILGMAREV 178 Query: 179 VAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A L K+ E+ + + + P+ + + C + +KGV + P W Sbjct: 179 --AALNKIPFEAPEVKKTAAVIDDVFPVRV----EAPEACPRYVGRVIKGVDLSAPTPQW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M ++L+ G+RSI A+VD+TN+V ++ G P H FD + ++D + VR GEK++ LD Q Sbjct: 233 MVEKLRRSGIRSIDAVVDVTNFVMIELGQPMHAFDLNELADGIVVRMPTPGEKLVLLDGQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E ++PD +VIA + + ++AG++GG+H+G + T D+ +E A + P+++A ++ G+ Sbjct: 293 EITINPDTLVIADNEKPLALAGVMGGEHSGVSEKTKDIFLESAFFAPLHLAGKARSYGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKIVFMNSE 410 TDS +RFERGVD ++ L+L + GG ++IC ++ K + ++ Sbjct: 353 TDSSHRFERGVDYAHQARAIERATELLLEIVGGQPGPVTEICSKEHLPAKAL-VNLRHAR 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V L G+ + +L RLG V D + S P+ R D+ + DL+EE+ R+YG Sbjct: 412 VDELLGVHLDRTRVEEMLARLGLGVHKVAKDGWTFSAPTHRFDISIEVDLIEEVARLYGY 471 Query: 470 DQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +++ +EP+ + + L + R +K L SR E + ++F+ ++ L + Sbjct: 472 NKLPVTEPMAPLGI---KPLPESKVSLRRLKLHLVSRGYQEAITYTFVDQKVLSLLTPEE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK-YM 587 + + NPI++DM+ MRT+L GLL+ N +R +FE + + Q+ M Sbjct: 529 DTITLANPIASDMAAMRTTLWAGLLQTALYNQNRQQNRIRLFESGLRFLKRGGQIQQDPM 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G+S EG W E + R VD +D K D S++E + +L F S Sbjct: 589 LAGLIMGASMPEG----W----ESKKRTVDFYDVKGDLESLLE--IPGCNLSFRSAQHPA 638 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ + + + G G HP I L+ P+ FE+ L+SI Q K Sbjct: 639 LHPGQTAEVLKDGQPI-GVLGALHPRIAKTLNLNGPLYLFELCLNSIADGQVPSFKG--- 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S ++RDLA ++D+ P A + I ++ +FDV+ G+S+G KKS+A Sbjct: 695 --VSRFPEIRRDLAIVIDEQTPYADVALAIAQSAGEWRVHHELFDVYHGESVGADKKSLA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 I ++ + + T RD++I D +V+ + + A LRS Sbjct: 753 ISIVWRHPERTLRDEEITEAFDNVVKELGNRFGASLRS 790 >gi|262275831|ref|ZP_06053640.1| phenylalanyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] gi|262219639|gb|EEY70955.1| phenylalanyl-tRNA synthetase beta chain [Grimontia hollisae CIP 101886] Length = 796 Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust. Identities = 277/821 (33%), Positives = 426/821 (51%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS---VERNPD 57 MKF+ SWL++ ++ V+ E++ +T GLEV+ D FT V V ++PD Sbjct: 1 MKFSESWLREWVNPAVNSEELAHQITMAGLEVD--DIAAVAGEFTGVVVGEVVECSQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +++ G + + +VCGAPN R+GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVNVGGEELLDIVCGAPNCRLGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMELP DAP+G +YL+L+D IDV LT NR+DC+ ++G+A Sbjct: 118 MLCSFSELGIDVESNGIMELPADAPIGTDFREYLKLNDVTIDVDLTANRADCLSIKGLAR 177 Query: 177 DLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PN 232 ++ G L + +S P + SI ++ ++ + C + VKGV A P Sbjct: 178 EV-----GVLNRVEVSQPAFEKVTSSIDDKVSVAVEAPAACPRYLGRVVKGVNVKAATPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD +++ + R A GEK++ LD Sbjct: 233 WMQEKLRRSGIRSIDPIVDITNYVMLEQGQPMHAFDLAKVEGGIVARMAKPGEKLVLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLG 351 E +L+ + +VIA + +IAGI GG+ +G + + TTDVL+E A + P I +N G Sbjct: 293 NEAELNENTLVIADHNKALAIAGIFGGQDSGVNAETTTDVLLEAAFFAPEAIRGRARNYG 352 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNS 409 + TDS +RFERGVD ++ L++ +CGG A +I + + P+ I S Sbjct: 353 LHTDSSHRFERGVDSTLQYHAMERATQLLIDICGGEAGEIVGQESEEHLPKANTIALRRS 412 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ L G +P ED + IL RLG V + + P WR D+ + DLVEE+ RIYG Sbjct: 413 KLDNLLGHHIPSEDVVEILTRLGCDVEATDEGWTAKAPFWRFDMAIEQDLVEEVGRIYGY 472 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D I ++ P+ ++ ++ Q R V+ +L R E + +SF+ Q L Sbjct: 473 DNIPNQA-PVASLKMNDHVEANQPLKR-VRDLLVDRGYHEAITYSFVEPNQQKLIVPDVE 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDTPEG 583 L + NPISADMS MR SL GLL N R +FE + EN Sbjct: 531 PLILPNPISADMSAMRLSLWTGLLNTVAYNQKRQQPRVRLFEAGLRFIPCEGAENGML-- 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G E W S VD FD K D +++E + + F++ Sbjct: 589 QEMMLAGVIAGPRAEEH----WDIASNT----VDFFDLKGDLEAILELTANELNYSFKAA 640 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I+ EIV GY G HP + FGL+ FE+ +I KR Sbjct: 641 KHPALHPGQSAAIEVDGEIV-GYIGTVHPELERKFGLNGRTIVFEIEWSAI----NKRVI 695 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGK 762 + VV +S +RD+A IV + + +V D L+ +FD+++GK + EGK Sbjct: 696 PEAVV-ISKFPANRRDIAVIVGDDVASDAVVRACLETDNPLVTGAKLFDLYKGKGVEEGK 754 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T + DI + ++ + +K +A LR Sbjct: 755 KSLAIALSLQSTERTLEERDISEAVASVIALLSEKFDAHLR 795 >gi|37680154|ref|NP_934763.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio vulnificus YJ016] gi|320156097|ref|YP_004188476.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio vulnificus MO6-24/O] gi|41018263|sp|Q7MK40|SYFB_VIBVY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|37198900|dbj|BAC94734.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio vulnificus YJ016] gi|319931409|gb|ADV86273.1| phenylalanyl-tRNA synthetase beta chain [Vibrio vulnificus MO6-24/O] Length = 795 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/822 (33%), Positives = 423/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGTFNGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL IDAP+G D+L L+D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAIDAPIGMDFRDFLALNDVTVDVDLTSNRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +++ P +++ +E+K + C + VK V P W Sbjct: 178 EVGVLNRADVTEPSVAPVAPSIDDTVAIEVKA----PAACPRYLGRVVKNVNVQAKTPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEKI LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIDGGIVVRLAEQGEKITLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTSETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEV 411 TDS RFERGVD + ++ +L++ +CGG + + + KP K+ +++ Sbjct: 354 TDSSMRFERGVDYALQVSAMERATALLVEICGGEVAPVVAVESEAELPKPNKVALRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DLVEE+ RIYG D Sbjct: 414 DNLLGHHIADSDVVEILERLGMTVETTAEGWVAVAPTWRFDIAIEQDLVEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D + ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHQEANIPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG---QKY 586 L + NPISA+MS MR L+ GLL N R +FE + DT E Q+ Sbjct: 531 LILPNPISAEMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCDTAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFES 642 M AG+ G+ +SEE VD FD K D +++E + + F + Sbjct: 591 MLAGVIAGT------------RSEEHWNIDTNTVDFFDLKGDVEAILELSANDKAYSFVA 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+S I + + G G HP + FGL+ FE+ +I R Sbjct: 639 AKHPALHPGQSAAIVVDGKEI-GVIGTVHPELERKFGLNGRTIVFEIEWSAI-----NRK 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + V LS +RD+A +VD+ + +G +VN V + +FDV+ GK + EG Sbjct: 693 VIPEAVALSKFPANRRDIAVVVDEAVASGDIVNACLEVGGEFLKAAKLFDVYVGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T D DI +D IV +V +K A LR Sbjct: 753 KKSLAIALTLQSNERTLEDADIAGAVDAIVAHVSEKFGASLR 794 >gi|119472476|ref|ZP_01614575.1| phenylalanyl-tRNA synthetase beta subunit [Alteromonadales bacterium TW-7] gi|119444913|gb|EAW26212.1| phenylalanyl-tRNA synthetase beta subunit [Alteromonadales bacterium TW-7] Length = 795 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 257/817 (31%), Positives = 434/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + L+ GLEV+ V+ A + + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPAIDTQALSEQLSMAGLEVDGVEPAAAKFNGVLVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCREGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL +S++S IMELP DAP+G L DYL L D IIDV LTPNR DC+G++G+A ++ Sbjct: 120 CAFDELGISEESEGIMELPSDAPIGADLRDYLSLDDNIIDVDLTPNRGDCLGIKGLAREV 179 Query: 179 VAAGLGKLKEINISC---PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L I+++ P + +I ++ +L + C + +KG+ + P WM Sbjct: 180 -----GVLNSIDVNVLEIPAVAPTIDDKVSIELVNEDACPRYLGRVIKGINLDAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VD+TNYV L+ G+P H FD S I + VR A + E+++ LD Sbjct: 235 VEKLRRSGVRSIDPVVDVTNYVLLELGHPMHAFDLSAIEGGIKVRSANADEELVLLDGNT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +VIA + + +IAGI GG+ +G + TTD+L+E A ++P+ IA ++ G+ T Sbjct: 295 AKLNESTLVIADNDKALAIAGIFGGEQSGVTEKTTDILLESAFFNPVAIAGQARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ +L+L + GG A + +A + K ++ S + Sbjct: 355 DASHRYERGVDFALQHDAMQRATALLLEIVGGQAGPVVEAVAADKLPKVTEVRLRRSRLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + IL RLG V E D + +PS+R D+ + DL+EE+ R+YG + I Sbjct: 415 RVIGHHIDDAKVTDILTRLGLDVKVENDSWSADIPSYRFDIRIEEDLIEEVARVYGYNSI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P ++ S+ S+ R L +R E + +SF+ + + L Sbjct: 475 PNVAPTAKLKMTTHNEASIALSKFR---NTLVTRGYQEAITYSFVDPKAQAILHPQSDAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAG 590 + +PIS +MS MR SL+PGLL + N +R +FE + +D E Y Sbjct: 532 ALPHPISIEMSAMRVSLMPGLLASVAYNQNRQQPRIRLFEHGLKFISDENAENGVYQVPV 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WY 648 I +G+ G W E R VD +D K D +++ ++ D RFE A Sbjct: 592 IGGAITGL-AHGEHWV----EEKRNVDFYDLKGDVEALLA--ITNDVSRFEIKAEQSDGL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S +I + V G+FG HP ++N FE+ + +I ++ + Sbjct: 645 HPGQSAVIYVDGKKV-GFFGALHPQAQKSLDINNATFVFEIEMSAI-----EKRNLPQAE 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V + +G ++N I+ V ++L+ D+ +FDV++GK + KS+A Sbjct: 699 SVSKFPSNRRDIAILVADSVKSGDILNAIEKVGGNQLV-DLNLFDVYKGKGIEPNYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I + +Q + T + DI +++D +V + +K NA LR Sbjct: 758 IALTLQAVDRTLEEKDINLVVDNVVAELAEKFNASLR 794 >gi|153831071|ref|ZP_01983738.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] gi|148873452|gb|EDL71587.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae 623-39] Length = 795 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 265/819 (32%), Positives = 422/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ ++ +++ +T GLEV+ V + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDVLAVAGVFDGVKVGQVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + +I I D+ + C + VK V P WM Sbjct: 180 -----GVLNRADVTAPAVNAIAATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD E Sbjct: 235 QEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ T Sbjct: 295 AKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS RFERGVD ++ L++ +CGG + + A + KP ++ S++ Sbjct: 355 DSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + I Sbjct: 415 KLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYNNI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 475 PNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPGVD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPISA+MS MR SL+ GLL N R +FE + D Q+ Sbjct: 530 ALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 590 PMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAATKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 642 PALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRVIP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGKKS Sbjct: 696 EAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 756 LAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|27365690|ref|NP_761218.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio vulnificus CMCP6] gi|30316212|sp|Q8DA39|SYFB_VIBVU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|27361839|gb|AAO10745.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio vulnificus CMCP6] Length = 795 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/822 (33%), Positives = 423/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGTFNGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL IDAP+G D+L L+D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAIDAPIGMDFRDFLALNDVTVDVDLTSNRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +++ P +++ +E+K + C + VK V P W Sbjct: 178 EVGVLNRADVTEPSVAPVAPSIDDTVAIEVKA----PAACPRYLGRVVKNVNVQAKTPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEKI LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIDGGIVVRLAEQGEKITLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTSETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEV 411 TDS RFERGVD + ++ +L++ +CGG + + + KP K+ +++ Sbjct: 354 TDSSMRFERGVDYALQVSAMERATALLVEICGGEVAPVVAVESEAELPKPNKVALRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DLVEE+ RIYG D Sbjct: 414 DNLLGHHIADSDVVEILERLGMTVETTAEGWVAVAPTWRFDIAIEQDLVEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D + ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHQEANIPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG---QKY 586 L + NPISA+MS MR L+ GLL N R +FE + DT E Q+ Sbjct: 531 LILPNPISAEMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCDTAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFES 642 M AG+ G+ +SEE VD FD K D +++E + + F + Sbjct: 591 MLAGVIAGT------------RSEEHWNIDTNTVDFFDLKGDVEAILELSANDKAYSFVA 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+S I + + G G HP + FGL+ FE+ +I R Sbjct: 639 AKHPALHPGQSAAIVVDGKEI-GVIGTVHPELERKFGLNGRTIVFEIEWSAI-----NRK 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + V LS +RD+A +VD+ + +G +VN V + +FDV+ GK + EG Sbjct: 693 VIPEAVALSKFPANRRDIAVVVDEAVASGDIVNACLEVGGEFLKAAKLFDVYVGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T D DI +D IV +V +K A LR Sbjct: 753 KKSLAIALTLQSNERTLEDADIAGAVDAIVTHVSEKFGASLR 794 >gi|297578819|ref|ZP_06940747.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae RC385] gi|297536413|gb|EFH75246.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae RC385] Length = 795 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYLGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|91223957|ref|ZP_01259221.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] gi|91191449|gb|EAS77714.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio alginolyticus 12G01] Length = 801 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/825 (33%), Positives = 425/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDEV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + +K V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAPSIDDKVSIEVKAPAACPRYLGRVIKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 NEAELNADTLVVADHNKALAIAGIFGGEESGVTTETNDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADSDVVEILERLGLTVEASEEGWMAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQHPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG---QK 585 L + NPISADMS MR L+ GLL N R +FE + +T E Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCETAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|82701626|ref|YP_411192.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosospira multiformis ATCC 25196] gi|91208121|sp|Q2YBS1|SYFB_NITMU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|82409691|gb|ABB73800.1| phenylalanyl-tRNA synthetase beta subunit [Nitrosospira multiformis ATCC 25196] Length = 792 Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 431/819 (52%), Gaps = 42/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ ++ +S + LT GLEVE V+ A + +VLSV+++PD D Sbjct: 1 MKFSENWLRTFVNPPLSTRDLAHALTMAGLEVESVEPVAPAFHKVVVAEVLSVQKHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + G + +Q+VCGA NVR G+ A G+ +P M + +IRG+EST Sbjct: 61 HLQVCKVKTGAAGNDEPLQIVCGAANVRAGIKVPCALSGAQLP--GMAIKQTRIRGVEST 118 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS KEL L D S+ ++ L DAPVG Y +L D ++ + LTPNR DC+G+ GIA Sbjct: 119 GMLCSAKELGLEDASSGLLLLSPDAPVGTDFRAYYDLEDNLLTLKLTPNRGDCLGLSGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 ++ A + + I P+S++ I + +D ++ C + V+G+ +VA P WM Sbjct: 179 REVAAITSQNRQSVEIK-PVSAQ-IAETLAIHVDAATACPLYCGRVVRGISLDVATPQWM 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT----VRRACSGEKILAL 290 QRL+ GLR+I+ +VD+TNYV L+ G P H FD +RI L +R A GE I L Sbjct: 237 VQRLERSGLRAINPVVDVTNYVMLETGQPLHAFDLARIQGGLAGSIHIRFARPGESIELL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + + L PD +VIA D + ++AGI+GG +G D+ +E A + P IA +L Sbjct: 297 NGENLVLQPDMLVIADDAKPLALAGIMGGNESGVTSGAVDLFLESAFFSPGVIAGKSFSL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G +DS YRFERGVD ++ LIL++CGG + R I Sbjct: 357 GFSSDSAYRFERGVDFGATRAAMERATDLILNICGGRVGPVTELRGSLPARDPIRLGLER 416 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R+ G+++ +L RL F + F V+ P++R D+ + DL+EE+ R+YG + Sbjct: 417 VGRVLGVELDEGRVAELLHRLQFGFLNTDAVFYVTPPTYRFDLAIEEDLIEELARMYGYN 476 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I + +P +++ +++R+R ++++L +R EV+N++F+ G + Sbjct: 477 RIAAT-MPRAKLDILSAPETRRTRSR-LRQILVARDYQEVINYAFVETSWETELAGNRTP 534 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NP+S ++ MR+SLL GL+ N++R + +FE+ ++ D GQ Y Sbjct: 535 IALKNPLSNQLAVMRSSLLGGLISNLQFNLNRKQSRIRLFEIGGCFQKD---GQTY---- 587 Query: 591 IRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 S + +G + D EE+ R VD +DAKAD IE + LR + Sbjct: 588 ----SQQEKLAGLCYGDVVEEQWGLPARPVDFYDAKAD----IEALLWPGELRVAAARHP 639 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I I G+ GE HP GL+ + FE+ +D + RT + Sbjct: 640 ALHPGKSAEISIDGRIG-GFLGELHPRWQQKLGLARSVVLFELNVDVL----LART-LPQ 693 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 +S P++RD+A +V + + +++ +++ +I ++ +FDV+QGK + KKS+ Sbjct: 694 ASEISKYPPIRRDIAVLVPKDVSVQAILDSMRSEKLSIISEIALFDVYQGKGVESDKKSL 753 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A ++L+Q + T D ++ +++ + + A LRS Sbjct: 754 AFRMLLQDTEKTLTDAQADQVVAKLISVLENRFGARLRS 792 >gi|15641233|ref|NP_230865.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121730320|ref|ZP_01682686.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae V52] gi|153823874|ref|ZP_01976541.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|227081392|ref|YP_002809943.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|229505187|ref|ZP_04394697.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229511143|ref|ZP_04400622.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229518261|ref|ZP_04407705.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229608207|ref|YP_002878855.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae MJ-1236] gi|254848345|ref|ZP_05237695.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255745624|ref|ZP_05419572.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262159101|ref|ZP_06030213.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae INDRE 91/1] gi|298498681|ref|ZP_07008488.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] gi|12644584|sp|Q9KSN6|SYFB_VIBCH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|9655701|gb|AAF94379.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121627930|gb|EAX60502.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae V52] gi|126518604|gb|EAZ75827.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae B33] gi|227009280|gb|ACP05492.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae M66-2] gi|229344976|gb|EEO09950.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae RC9] gi|229351108|gb|EEO16049.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae B33] gi|229357410|gb|EEO22327.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae BX 330286] gi|229370862|gb|ACQ61285.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae MJ-1236] gi|254844050|gb|EET22464.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae MO10] gi|255736699|gb|EET92096.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholera CIRS 101] gi|262029286|gb|EEY47938.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae INDRE 91/1] gi|297543014|gb|EFH79064.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio cholerae MAK 757] Length = 795 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|254292246|ref|ZP_04963008.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] gi|150421839|gb|EDN13824.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae AM-19226] Length = 795 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLLVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETVT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|229515601|ref|ZP_04405060.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] gi|229347370|gb|EEO12330.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae TMA 21] Length = 795 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIKGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTQDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|312172266|emb|CBX80523.1| phenylalanyl-tRNA synthetase, beta subunit [Erwinia amylovora ATCC BAA-2158] Length = 795 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 266/816 (32%), Positives = 422/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ + + +C+ +T GLEV+ VD A + V+ ++P+ D Sbjct: 1 MKFSELWLREWVSPAIDSAALCEQITMAGLEVDGVDAVAGAFHGVVVGDVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ + I+ELP DA +G + YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGIAVEQDGIIELPQDATIGTDIRQYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E+N++ +++ I+ D D+ C + VKGV P WM+++ Sbjct: 180 AVLNRLPLNEVNMTPVVATLPDTFPIRVDAPDA--CPRYLGRVVKGVNVQAQTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD RI+ + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIAGGIVVRHAEEGETLKLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGI GG+ +G + T +VL E A + P++IA + G+ TD+ Sbjct: 298 SVDTLVIADEHKALAMAGIFGGEDSGVNPQTQNVLFECAFFSPLSIAGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQFKAIERATRLLLDICGGAAGPVIDVTDESTLPQRSTITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + + IL RLG V +++ PSWR D+ + DLVEE+ RIYG D I Sbjct: 418 GHVIADAEVSDILRRLGCEVTEGQGEWQAVAPSWRFDLSIEEDLVEEVARIYGYDNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + E + +SF+ + L G+ L Sbjct: 478 PVQAGLVMTRHREADLSLKR-----VKALLVDKGYQEAITYSFVDPKTQALLHPGEDNLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL A N +R + +FE + DT Q+ M Sbjct: 533 LPSPISVEMSAMRLSLWSGLLAAVAYNQNRQQSRVRLFESGLRFVPDTQANLGIRQEIML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G E W + VD +D K D SV+E LD +RF + A Sbjct: 593 AGVIAGQRNEEH----WDLARDT----VDFYDLKGDLESVLELTGKLDDIRFVAAANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+ I E + G+ G HP + GL+ FE+ D ++ + V Sbjct: 645 HPGQCAGIYLRGEHI-GFIGVVHPELERKLGLNGRTVAFELLWDK--VADRVLPDASAV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA +V + K V + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADIVTVCKKVGANQVVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|170721156|ref|YP_001748844.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas putida W619] gi|169759159|gb|ACA72475.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas putida W619] Length = 793 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 256/814 (31%), Positives = 432/814 (53%), Gaps = 33/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGQ-ETFQVVCGAPNARPGIKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 119 CSAAELQISEENDGLLELAADAPVGEDIRQYLSLDDASIEIGLTPNRGDCLSLAGLARDV 178 Query: 179 VA-AGLGKLKEINISCPLSSESI-PLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMR 235 A + + + + P + + + P+E+ ++C + ++ V + P WM Sbjct: 179 SALYNVPVTRPVVPAVPAAHDEVRPVEVS----APAVCPRYLGRVIRNVDLSKPTPLWMV 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 235 ERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI +A ++ G+ T Sbjct: 295 ALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPIAVAGKARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ +L+L + GG A I A + + P+ + + Sbjct: 355 DASHRYERGVDSQLAREAMERATALVLEIVGGEAGPIIEAVSEQHLPQVAPVTLRAERIT 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+++ ++L L + ++ V VPS R D+ + DL+EE+ R+YG + Sbjct: 415 QMLGMELQAAQVEQMLNALELTTTANGAGEWTVKVPSHRFDISLEVDLIEELARLYGYNS 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P ++ K N + ++R+L +R E + +SFI + LF G L Sbjct: 475 LPVR-YPQARLAPKANPE-TRGELPNLRRLLVARGYQEAITYSFIDPKLFELFTPGVEPL 532 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAG 590 + NPIS+DM+ MR SL PGL+KA N++R +FE + + Q+ M AG Sbjct: 533 LLANPISSDMAAMRASLWPGLVKAMQHNLNRQQDRVRLFESGLRFVGQLGDLKQQPMIAG 592 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + GS EG W++ + +D FD KAD +++ +L F +G HP Sbjct: 593 VVTGSRLPEG----WANGRDS----IDFFDVKADVEALLGYSGALSDFTFAAGKHPALHP 644 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G++ +I+ + V GY G HP + GL P+ FE+ L + + K L Sbjct: 645 GQTALIQRDGKEV-GYLGALHPEVAKALGLDRPVYVFELVLGDV-----VEGRLPKFSEL 698 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RDLA I + + A ++ +I+ N + D+ +FDV+QGK + +KS+A+ + Sbjct: 699 SKFPETRRDLALIAGRDVAASAVLEVIRDNAGEWLTDLRLFDVYQGKGIDPDRKSLAVGL 758 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q T DD++ + I+ ++ ++ N LR Sbjct: 759 TWQHPSRTLNDDEVNTTLQNILTSLEQRLNTTLR 792 >gi|153801919|ref|ZP_01956505.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] gi|124122564|gb|EAY41307.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae MZO-3] Length = 795 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|319776255|ref|YP_004138743.1| phenylalanine tRNA synthetase subunit beta [Haemophilus influenzae F3047] gi|329123394|ref|ZP_08251958.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] gi|317450846|emb|CBY87070.1| phenylalanine tRNA synthetase, beta subunit [Haemophilus influenzae F3047] gi|327470976|gb|EGF16431.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus aegyptius ATCC 11116] Length = 795 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 264/820 (32%), Positives = 439/820 (53%), Gaps = 41/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPSVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 G + + ++ P E++P +++ DL C + + VK V A P W Sbjct: 180 -----GVVNKQLVNQP-HFEAMPATISDKVQIDLQAPEACPRYLLRVVKNVNVKAASPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGALAMAGIFGGAASGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATILLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETGSVTEIFHRLGFGVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFAPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKAFVFEMLWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +AI + +Q + T D++I ++ ++ V ++ NA LR+ Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELRN 795 >gi|229521340|ref|ZP_04410759.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] gi|229341438|gb|EEO06441.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae TM 11079-80] Length = 795 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVTLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|88706037|ref|ZP_01103745.1| Phenylalanyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] gi|88699751|gb|EAQ96862.1| Phenylalanyl-tRNA synthetase beta chain [Congregibacter litoralis KT71] Length = 792 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 263/825 (31%), Positives = 427/825 (51%), Gaps = 56/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + +T GLEV+ ++ A S + ++ ++PD D Sbjct: 1 MKFSEQWLREWVNPALSTEALGHQITMAGLEVDAIEPVAGAFSGVIVAEITEAVQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +Q+VCGAPN R GL A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLQVCTVDAGNGSPLQIVCGAPNARKGLKTPLAVVGAMLP-GDFAIKAAKLRGVESQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL LS++ I+ELP DAPVG L +YL+L D I++ LTPNRSDC+G+ GIA ++ Sbjct: 120 CAASELGLSEEKDGILELPGDAPVGTDLREYLKLDDVSIEIGLTPNRSDCLGMAGIAREV 179 Query: 179 VAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAP 231 G L ++ + P L+S+ + DL S+ C + + GV + +P Sbjct: 180 -----GLLNDLAVCAPPENAQELTSDEA---VTVDLRASARCPRYLCRVIDGVDLSRPSP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+++L+ G+RSI A VD+TNY+ L+ G P H FD +I + VR A GE + L+ Sbjct: 232 LWMQEKLRRCGVRSIDAAVDVTNYLLLEFGQPMHAFDLDKIKGGIVVREANPGETLKLLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +Q L +N+VIA + AGI+GG + + TT +L+E A + P+ ++ + G Sbjct: 292 DQTITLGSNNLVIADHEGPLAFAGIMGGADSAVGEGTTRLLLESAFFAPVPLSGQARAFG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNS 409 + TDS +RFERGVD + ++ L+L + GG A I ++ P I + Sbjct: 352 LHTDSSHRFERGVDFELQRRAMERATELLLEIVGGAAGPITEAVSEQDLPAPAPIHLRAA 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++RL G+ + E RIL +G V D +E +VPSWR D+ +ADL+EE+ R+YG Sbjct: 412 RIERLLGVIIESETVERILRGVGLEVSAVEDGWECAVPSWRFDLRIEADLLEELARVYGY 471 Query: 470 DQIKSEPLPLTQVE--------DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 + LP+T++ + L LQQ ++R L +R E + +SF+ + Sbjct: 472 NN-----LPVTRIRADVVLPAIPEEKLHLQQ-----LRRALVARDYFEAICYSFVDADIQ 521 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + NPIS + + MR+SLL GLL+ NV R +FE + + Sbjct: 522 KALDPAIEPVALNNPISPEHAVMRSSLLAGLLRTAQHNVKRQQPRVRLFETGLRFVPGS- 580 Query: 582 EG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 EG Q+ A + GS EG W+D R D +D K D +++ S R Sbjct: 581 EGLTQRPGLAMLVCGSQAAEG----WADPG----RNADFYDLKGDVEALLALTGDAASFR 632 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 FE+G S HPG++ +K E V G+ G HP + P+ E+ L+ + Sbjct: 633 FEAGERSGLHPGQTAWLKRGDETV-GFVGVLHPTLQKKLDFDLPVVVAELDLEML----- 686 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 + +S ++RD+A IVD+ + AG L+ N+ + D+T+FDV++GK + Sbjct: 687 RAAAIPAFTPVSRYPALRRDIAVIVDKTVKAGELLANVRATAGAYLQDLTLFDVYEGKGI 746 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KSVA+ + Q T D+++ + ++V+++ + A LR Sbjct: 747 DPARKSVALGLTFQDHSRTLDDNEVNTCIQQVVDSLKENYQAELR 791 >gi|322833534|ref|YP_004213561.1| phenylalanyl-tRNA synthetase, subunit beta [Rahnella sp. Y9602] gi|321168735|gb|ADW74434.1| phenylalanyl-tRNA synthetase, beta subunit [Rahnella sp. Y9602] Length = 795 Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust. Identities = 270/816 (33%), Positives = 437/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + D +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVEPVAGAFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP+DAPVG + ++L+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPLDAPVGTDIREFLKLDDTTIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E ++ P+ + +I I D+ C + VKG+ P WMR++ Sbjct: 180 AVINQLPLVEPEMN-PVKA-TIDATIPIDVQAPQACPRYLGRVVKGINVKAPTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G RSI A+VDITNYV L+ G P H FD +RIS + VR A E + LD E L Sbjct: 238 LRRCGTRSIDAVVDITNYVLLELGQPMHAFDLNRISGGIVVRMAQKNEALTLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G +D T DVL+E A + P++I + G+ TD+ Sbjct: 298 AEDTLVIADHEKALAMAGIFGGEHSGVNDETQDVLLESAFFAPLSITGRARRQGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD + ++ +L+LS+CGG A + A + P+ I ++ RL Sbjct: 358 HRYERGVDPELQFKAIERATALLLSICGGEAGPVIEATSDVDLPKAATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V IL RLG V D + PSWR D++ + DLVEE+ R+YG + I Sbjct: 418 GHHVEDAQVTDILTRLGCKVQHNGDHWVAVAPSWRFDMQIEEDLVEEVARVYGYNNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + V K NLSL++ VK +L R E + +SF+ + L G+ L Sbjct: 478 PVKASLVMTKHREANLSLKR-----VKNLLVDRGFQEAITYSFVDPKVQALLHPGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS +MS MR SL GLL A N +R + +FE + P+ Q + GIR Sbjct: 533 LPSPISVEMSAMRLSLWSGLLTAVVNNQNRQQSRVRLFESGLRF---VPDTQADL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + SG + K+EE + VD +D K D +++E ++ ++F+ A Sbjct: 588 Q---DVMLSGVISGTKNEEHWDLARQAVDYYDLKGDLEAILELTGKMNDVQFKVEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + ++ + K++ Sbjct: 645 HPGQSAAIYLRGERI-GFIGVVHPELERKLDLNGRTVVFEMLWNK--VADRVLPDAKEI- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPADDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLVLQDTGRTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|296102761|ref|YP_003612907.1| phenylalanyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057220|gb|ADF61958.1| phenylalanyl-tRNA synthetase subunit beta [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 266/816 (32%), Positives = 438/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++T + E + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNTTLDSEALSNQITMAGLEVDGVEPVSGAFTGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPLDAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 +L I+ ++ S L I+ D ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQTELNAPEIAPVAATISDVLPIQVDAPEA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIIVRMAKEGENLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA G+ ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHGKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTNENTLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V IL+RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHVADAQVTDILKRLGCDVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + EV+ +SF+ + L GQ L Sbjct: 478 PVQAGLVMGSHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKLQQLIHPGQEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS++MS MR SL GLL N +R IFE + P+ Q + GIR Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTIVYNQNRQQNRVRIFESGLRF---VPDNQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G + ++ EE VD +D K D ++++ L ++F + A Sbjct: 588 Q---DLMLAGAISGNRYEEHWDLAKGTVDFYDMKGDLEAILDLTGKLSEIKFRAEAIPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + + + G+ G HP + L+ FE L+ P++ + + + V Sbjct: 645 HPGQSAAIYLAGKRI-GFIGVVHPELERKLDLNGRTIVFE--LEWSPVADRVIPQAQDV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA L K + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADILAECKKVGVNQVVGVNLFDVYRGKGVAEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|293389946|ref|ZP_06634280.1| phenylalanyl-tRNA synthetase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] gi|290950480|gb|EFE00599.1| phenylalanyl-tRNA synthetase, beta subunit [Aggregatibacter actinomycetemcomitans D7S-1] Length = 796 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 259/819 (31%), Positives = 428/819 (52%), Gaps = 40/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPVISTEQLCDQITMLGLEVDGVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAKLP-GNFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+EL DAP+G L DYL+L D I++SLTPNR+DC+ + G+A +L Sbjct: 120 CSFSELGIESDANGIIELLQDAPIGTNLRDYLKLDDNAIEISLTPNRADCLSIAGVAREL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + KL E +I +++ D+ C + + V+ V +P WM+++ Sbjct: 180 --AVVNKLHENPPHFKAVQPTIDDKVQIDVLAPEACPRYLLRVVRNVNVKAQSPMWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD ++++ + VR A E+++ LD L Sbjct: 238 LRRCGIRSIDPIVDITNYVLLELGQPMHAFDMAKVAQPVQVRMAKENEELVLLDGTTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIITDS 356 P+ +VIA ++AGI GG+ +G + ++T DV++E A + P+ I + G+ TDS Sbjct: 298 QPNTLVIADQNGALAMAGIFGGEASGVNAESTKDVILEAAFFAPLAITGRARQYGLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRL 414 +RFERGVD + ++ +L+L +CGG A +IC N Y P++ + ++ L Sbjct: 358 SHRFERGVDFELPRKAMERATALLLDICGGEAGEICEVVNAQYLPKRQQVTLQRHKLDAL 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-K 473 G + E IL+RLG V D + PSWR D+E DL+EEI RIYG + I Sbjct: 418 LGHHIATETITEILQRLGLQVSYAADTWTAIAPSWRFDIEIAEDLIEEIARIYGYNSIPN 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + PL + + + ++ SR +K L S E + +SF+ + L + + + Sbjct: 478 NAPLAHLCMREHKEADIELSR---IKAALTSCDFYEAITYSFVDPKIQSLLHPDVKPMVL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQKYMAA 589 NPIS +MS MR SLL GLL A N +R + +FE + D Q+ + A Sbjct: 535 PNPISVEMSAMRVSLLTGLLGAVIYNQNRQQSRVRLFEHGLRFIPDEKAEFGVHQEPVFA 594 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS----LRFESGAP 645 + G S WS+K+ D +D K IE +SL S +F + + Sbjct: 595 AVMTGLK----SNEQWSEKAVP----ADFYDLKG----YIENLLSLSSAGNRAKFVAKSY 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + HPG+S I E + G+ G+ HP I GL+ + ++ I ++ R + Sbjct: 643 TALHPGQSAAIMLDGEEI-GFIGQLHPTIAQKIGLTG-----KAFVCEISVAHISRREVA 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 + +S +RDLA +V +IPA ++ + + + +FDV+ G + G KS Sbjct: 697 RAKEISRFPANRRDLAVVVADNIPANDVLEACRTAGGNKLTQINLFDVYYGTGVAAGHKS 756 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI ++IQ + T +D+I ++ ++ + ++ NA LR Sbjct: 757 LAISLVIQDNEKTLEEDEINAVISTVLSELKQRFNAYLR 795 >gi|238791697|ref|ZP_04635334.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia intermedia ATCC 29909] gi|238728801|gb|EEQ20318.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia intermedia ATCC 29909] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 263/818 (32%), Positives = 422/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + I V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVIGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ P+++ IP ++ C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLSEPDMT-PVAA-LIPDTFPIHVEAPQACPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIDGGIIVRLAAEGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADQHKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + P+ I ++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDVTAAAELPKCATITLHREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 418 GHHVPSEQVSDILRRLGCQVTELGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 P+ K NL + + R + VK L R E + +SF+ + L Q Sbjct: 478 PV-------KANLVMTKHREADLSLKRVKMALVDRGYQEAITYSFVDPKVQALLHPQQDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + +PIS +MS MR SLL GLL A N +R + +FE + D+ Q Sbjct: 531 LILPSPISVEMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDSTADLGVRQDL 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ +G + + + + +D +D K D +++E L ++F + A Sbjct: 591 MLAGVI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAQAHP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I S E + G+ G HP + L+ FEV + + + Sbjct: 643 ALHPGQSAAIYLSGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNRL-----ADRAVPQ 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+ Sbjct: 697 ASEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + R VE + ++ A LR Sbjct: 757 AISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|120554973|ref|YP_959324.1| phenylalanyl-tRNA synthetase subunit beta [Marinobacter aquaeolei VT8] gi|120324822|gb|ABM19137.1| phenylalanyl-tRNA synthetase beta subunit [Marinobacter aquaeolei VT8] Length = 790 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 435/818 (53%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ ++ +++ D +T GLEV+ + S + +V+SV +PD D Sbjct: 1 MKFSEQWLREWVNPNIGSQELMDQITMAGLEVDGFEAVAGEFSGVVVGEVISVAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ Q +QVVCGAPNVR GL +A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVCQVSNGE-QTVQVVCGAPNVRDGLKVPFAEVGAVLP-GNFKIKKAKLRGQPSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL LSD+ +MELP DAPVG +DYL+L+D IDV LTPNRSDC+ ++G+A ++ Sbjct: 119 CSESELGLSDNHDGLMELPEDAPVGQPAADYLKLNDITIDVDLTPNRSDCLSIKGLAREV 178 Query: 179 VAAGLGKLKEINISCPL--SSESIPLEIK-FDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + + P E++ E+ ++ C + ++ V P WM Sbjct: 179 -----GVLNSLVTNAPSIPPVEAVHSEVPDIRVEAPEGCPRYLGRVLRNVNLQAETPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A VD+TNYV L+ G P H FD I + VR A SGEK++ LD QE Sbjct: 234 QEKLRRSGIRSIDAAVDVTNYVMLELGQPMHAFDRDEIKGGIVVRMAGSGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+P+ +VIA + +IAG++GG+H+G + T D+++E A +DPI +A + G+ T Sbjct: 294 VELTPETLVIADHEKPVAIAGVMGGEHSGVSEKTRDLVLESAYFDPITLAGKARQYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 D+ +RFERGVD + ++ L++++ GG +I +++ K R I + Sbjct: 354 DASHRFERGVDYELARDAMERATGLLMAIVGGEPGEIVEVASKDHLPKARVIDLREQRLA 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G+ + IL RLG + D + +SVPS+R D+ + DL+EE+ RI+G + Sbjct: 414 DVLGLRIDRTTVEEILSRLGLHIDKLLKDGWRISVPSFRPDISIEEDLIEEVGRIFGYNN 473 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR---YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 LP+T+ L ++ R V+ ++ E V +SF+ + L + Sbjct: 474 -----LPVTEPTGSLGLRAREEAVRPLSAVRNFFVAQGYQEAVTYSFVDPKVQQLVDPER 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYM 587 + + NPIS+D+S MRT+L GLLK G N +R +FE + D Q+ M Sbjct: 529 EGIALANPISSDLSVMRTTLWSGLLKTVGYNQNRQQPRIRLFETGLRFVQDADGISQQPM 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G+ E W + R D FD K + S+ + ++ S P+ Sbjct: 589 LAGVVVGNQNPEN----WVNGR----RTTDFFDVKGELESLFR-LLGIEVGFIASQHPA- 638 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ + E V G+ G HP + L+ I FE++L+SI K Sbjct: 639 LHPGQTAELLRDGEHV-GWLGALHPQVQKNLELNGTILMFELFLNSIVAGYVPNFKD--- 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V+RDLA I+ + + ++ K+ + + VFDV++G+SLGEG +S+A Sbjct: 695 --ISKFPEVRRDLAIIIGSDVAFAQVEHVARKHAGEHLTALRVFDVYEGESLGEGNRSLA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + Q + T +D++ L + +++ + ++ A LRS Sbjct: 753 LSLFWQHPERTLNEDEVHSLFNGVIDALKEELGATLRS 790 >gi|292488134|ref|YP_003531011.1| phenylalanyl-tRNA synthetase subunit beta [Erwinia amylovora CFBP1430] gi|292899345|ref|YP_003538714.1| phenylalanyl-tRNA synthetase subunit beta [Erwinia amylovora ATCC 49946] gi|291199193|emb|CBJ46307.1| phenylalanyl-tRNA synthetase beta chain [Erwinia amylovora ATCC 49946] gi|291553558|emb|CBA20603.1| phenylalanyl-tRNA synthetase, beta subunit [Erwinia amylovora CFBP1430] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 267/816 (32%), Positives = 422/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ + + +C+ +T GLEV+ VD A + V+ ++P+ D Sbjct: 1 MKFSELWLREWVSPAIDSAALCEQITMAGLEVDGVDAVAGAFHGVVVGDVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ + I+ELP DA +G + YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGIAVEQDGIIELPQDATIGTDIRQYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E++I+ +++ I+ D D+ C + VKGV P WM+++ Sbjct: 180 AVLNRLPLNEVDITPVVATLPDTFPIRVDAPDA--CPRYLGRVVKGVNVQAQTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD RI+ + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIAGGIVVRHAEEGETLKLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGI GG+ +G + T +VL E A + P++IA + G+ TD+ Sbjct: 298 SVDTLVIADEHKALAMAGIFGGEDSGVNPQTQNVLFECAFFSPLSIAGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQFKAIERATRLLLDICGGAAGPVIDVTDESTLPQRSTITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + + IL RLG V +++ PSWR D+ + DLVEE+ RIYG D I Sbjct: 418 GHVIADAEVSDILRRLGCEVTEGQGEWQAVAPSWRFDLSIEEDLVEEVARIYGYDNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + E + +SF+ + L G+ L Sbjct: 478 PVQAGLVMTRHREADLSLKR-----VKALLVDKGYQEAITYSFVDPKTQALLHPGEDNLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL A N +R + +FE + DT Q+ M Sbjct: 533 LPSPISVEMSAMRLSLWSGLLAAVAYNQNRQQSRVRLFESGLRFVPDTQANLGIRQEIML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G E W + VD +D K D SV+E LD +RF + A Sbjct: 593 AGVIAGQRNEEH----WDLARDT----VDFYDLKGDLESVLELTGKLDDIRFVAAANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+ I E + G+ G HP + GL+ FE+ D + R V Sbjct: 645 HPGQCAGIYLRGEHI-GFIGVVHPELERKLGLNGRTVAFELLWDKV----ADRVLPDASV 699 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +V + K V + V +FDV++GK + EG KS+AI Sbjct: 700 -VSRFPANRRDIAVVVAENVPAADIVTVCKKVGANQVVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|71275162|ref|ZP_00651449.1| phenylalanyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71898243|ref|ZP_00680417.1| phenylalanyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|170731153|ref|YP_001776586.1| phenylalanyl-tRNA synthetase subunit beta [Xylella fastidiosa M12] gi|71163971|gb|EAO13686.1| phenylalanyl-tRNA synthetase, beta subunit [Xylella fastidiosa Dixon] gi|71731982|gb|EAO34039.1| phenylalanyl-tRNA synthetase, beta subunit [Xylella fastidiosa Ann-1] gi|167965946|gb|ACA12956.1| Phenylalanine--tRNA ligase [Xylella fastidiosa M12] Length = 792 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 263/806 (32%), Positives = 425/806 (52%), Gaps = 38/806 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++H+ + + + TLT+IGLEVE V EAL + ++++V +P+ D Sbjct: 1 MKFSENWLRNHVPIQANRDVLVATLTAIGLEVENVAVLGEALDLIVVARIVNVVPHPESD 60 Query: 60 C-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D + +Q+VCGA NVR GL+ A G+ I + + +RG+ES GM+ Sbjct: 61 LLQICQVDVAQDNLLQIVCGASNVRPGLVVPLALLGAKI--GALTIKSTTLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +++ +MELP DAP+G L+DYL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDTEASGLMELPEDAPIGTPLADYLALPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ +I +S+ ++P+E+ + C C ++G+ + P WM Sbjct: 179 AAACASEVTPFHIDEIPAVSARTLPVELHAGANAPRYCG----CVIEGIDSAAPTPVWMA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VR + + E + LD + Sbjct: 235 ERLRRSGIRPVSLLVDITQYVMLELGQPMHAFDVDTLRGPIGVRLSRNDEALKLLDGRTV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +V+ + ++AG+IGG D T +V +E A + P I G+ LG+ TD Sbjct: 295 VLDNDFLVVTDADQPIALAGLIGGWETRITDTTVNVFLEAAHFAPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD + LIL L GG + Y P I+ + + R Sbjct: 355 ASHRFERGVDPALPPQAIAFATRLILELAGGKPGSLIHVELPEYLPAPASILLRRTRIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L GI + + RIL+ LG V + + + V PS R D+ + DL+EE++RI G + + Sbjct: 415 LLGIVIDDAEVERILQALGMQVTTQAEGWRVVAPSRRFDIAIEEDLIEELVRIRGYEHLP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P+ + + L + V+R L +R + E +N++FI E + ++ Sbjct: 475 TALPVGASHIAMPSETRLDMTS---VRRQLIARELQETINYAFIDAELLRRWQLNTGQVM 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 ++NP+SA+++ MR LLPGL+ A GRN+ R + +FE+ +V+ G AA + Sbjct: 532 LMNPLSAELAVMRPRLLPGLVAALGRNIARQLERVRLFELGNVFTASDEAG----AAPLE 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G ++ + E+ R VD +D K D S+ S L F S A W HPGR Sbjct: 588 TRHVAAAVCGDAFALQWGEQVRKVDFYDLKGDLESLAA--ASGAVLTFHSSAQPWGHPGR 645 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S + ++ +G+ G+ HP + ++ + FE+ L+ + R + LS Sbjct: 646 SADVWCD-DMCIGWIGQLHPALTQTLEINVDVIAFELALEPL-----VRRALPRAHALSR 699 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 V+RDLA +V +H+ L +++V L+ DV +FD + GK + G KS+AI +++ Sbjct: 700 FPFVRRDLACVVPEHVTWSELAITVRDVIGPLLRDVKLFDRYVGKGIEPGFKSLAIGLIL 759 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKK 797 Q DD R L+DR V++++ K Sbjct: 760 Q--------DDTRTLIDRDVDDIMTK 777 >gi|162139925|ref|YP_340416.2| phenylalanyl-tRNA synthetase subunit beta [Pseudoalteromonas haloplanktis TAC125] gi|93140708|sp|Q3IIL2|SYFB_PSEHT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 254/816 (31%), Positives = 435/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + L+ GLEV+ V A + + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPAIDTQALSEQLSMAGLEVDGVTPAAAKFNGVLVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL +S++ IMELP DAPVG L +YL L D IIDV LTPNR DC+G++G+A ++ Sbjct: 120 CAFVELGISEEGDGIMELPSDAPVGTDLREYLGLDDNIIDVDLTPNRGDCLGIKGLAREV 179 Query: 179 VAAGLGKLKEINISC---PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L I+++ P + ++ ++ +L + C + +KG+ + A P WM Sbjct: 180 -----GVLNSIDVNVLQIPAVTATVDDKVSIELVNEDACPRYLGRVIKGINLDTATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VD+TNYV L+ G+P H FD + I + VR A +GE+++ LD Sbjct: 235 VEKLRRSGVRSIDPVVDVTNYVLLELGHPMHAFDLNAIEGGIKVRSANAGEELVLLDGNS 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +VIA + +IAGI GG+ +G + T+D+L+E A ++P+ IA ++ G+ T Sbjct: 295 VKLNESTLVIADHNKALAIAGIFGGEQSGVTNKTSDILLESAFFNPVAIAGQARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ +L+L + GG A + +A + K ++ S + Sbjct: 355 DASHRYERGVDFALQHDAIERATALLLEIVGGEAGPVVEAVAADKLPKVTEVRLRRSRLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + E IL RLGF+V E D + VPS+R DV + DL+EE+ R+YG + I Sbjct: 415 RVIGHHIEDEKVTDILTRLGFNVKVENDSWSADVPSYRFDVRIEEDLIEEVARVYGYNSI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P ++ ++ S+ R L +R E + +SF+ + + + L Sbjct: 475 PNVAPTAKLKMTTHNEATIALSKFR---NTLVARGYQEAITYSFVDPKAQAILHPESQPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + +PIS +MS MR SL+PGLL + N +R +FE + +D + Sbjct: 532 VLPHPISIEMSAMRVSLMPGLLASLAYNQNRQQPRIRLFEHGLKFLSDENAENGVNQVPV 591 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WYH 649 G G W E R VD +D K D +++ ++ D RFE A H Sbjct: 592 IGGVITGLAHGEHWV----EEKRNVDFYDVKGDVEALLA--ITNDMSRFEIKAEQSDGLH 645 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S +I + + V G+FG HP ++N FE+ + +I ++ +V Sbjct: 646 PGQSAVIYVAGKKV-GFFGALHPQAQKSLDINNATFVFEIEMSAI-----EKRNLPQVAG 699 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V + + G ++ I+ V ++L+ D+ +FDV++GK + KS+AI Sbjct: 700 VSKFPSNRRDIAILVQESVNIGDILTAIEKVGGNQLV-DLNLFDVYKGKGIEPNYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +Q + T + DI +++D +V + ++ NA LR Sbjct: 759 ALTLQSVDRTLEEKDINLVVDNVVATLAEQFNASLR 794 >gi|309973175|gb|ADO96376.1| Phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2846] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 440/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNANVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRLAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIEIGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ ++ + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDSQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|238787093|ref|ZP_04630893.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia frederiksenii ATCC 33641] gi|238724881|gb|EEQ16521.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia frederiksenii ATCC 33641] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 265/814 (32%), Positives = 419/814 (51%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ +D + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHKITMAGLEVDGIDPVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP DAP+G L +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISEDHDGIIELPADAPIGVDLREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++S +S S I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMSPVAASISDTFPIRVDAPQA--CPRYLGRVVKGINVTAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIDGGIIVRLAAEGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + P+ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVIDVTATAELPKCATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 418 GHHVPSEQVSDILRRLGCQVTELGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R L R VK L R E + +SF+ + L Q L + Sbjct: 478 PIKADLVMTKHREADLPLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQDALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAG 590 +PIS DMS MR SLL GLL A N +R + +FE + D+ Q M AG Sbjct: 535 SPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDSKADLGVRQDLMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I S E + G+ G HP + L+ FEV + + + + Sbjct: 647 GQSAAIYLSGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKL-----ADRAVPQASEI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + R VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|260768665|ref|ZP_05877599.1| phenylalanyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] gi|260616695|gb|EEX41880.1| phenylalanyl-tRNA synthetase beta chain [Vibrio furnissii CIP 102972] Length = 795 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 274/822 (33%), Positives = 423/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGTFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAEDAVIGTDFREFLALNDVTIDVDLTSNRADCFSLRGMAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P S P I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVAEPAVSPVAPTIDANISIEVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPIVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D ++IA + +IAGI GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 NEAELNADTLIIADHNKALAIAGIFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS R+ERGVD ++ L++ +CGG + + A + KP + ++ Sbjct: 353 HTDSSMRYERGVDYALQHAAMERATQLLVDICGGDVAPVVAAESDADLPKPNTVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + IL+RLG SV + + + P+WR D+ + DLVEE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILQRLGMSVETTAEGWTATAPTWRFDIAIEQDLVEEVGRIYGYD 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P + N++L + +KRV L R E + +SF+ EQ L Sbjct: 473 NIPNQA-PAAAL----NMNLHKEANLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLIVPD 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG-- 583 L + NPISADMS MR SL+ GLL N R +FE + + + G Sbjct: 528 VEPLILPNPISADMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEQGLRFIPDQAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +++E + + F + Sbjct: 588 QEPMLAGVISGTRGEEH----WNLETAT----VDFFDLKGDVEAILELTANGKAYSFAAA 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I + + G G HP + FGL+ FE+ +I TK Sbjct: 640 KHPALHPGQSAAIVLDGKTI-GVIGTVHPELERKFGLNGRTIVFEIEWSAI------NTK 692 Query: 704 T-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEG 761 + V LS +RD+A +VD + +G +V ++ + D +FDV+ GK + +G Sbjct: 693 VIPEAVALSKFPSNRRDIAVVVDDAVASGDIVKACLEQGGEFLKDAKLFDVYVGKGVEDG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T D DI ++ IV +V K A LR Sbjct: 753 KKSLAIALTLQSAERTLEDADIAGAVEAIVAHVSAKFGATLR 794 >gi|307545109|ref|YP_003897588.1| phenylalanyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] gi|307217133|emb|CBV42403.1| phenylalanyl-tRNA synthetase subunit beta [Halomonas elongata DSM 2581] Length = 792 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/823 (33%), Positives = 429/823 (52%), Gaps = 50/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ + ++ + + D +T GLEV+ ++ A + +V+ +PD D Sbjct: 1 MKFSEQWLREWVSPALATQALADQITMAGLEVDGIEPVAAAFDGVVVAEVIERAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +QVVCGAPNV G +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCQVDDGV-ERLQVVCGAPNVAEGQKVAFARVGAVLP-GDFKIKKAKLRGVESRGMI 118 Query: 119 CSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L ++ SA I+ELP APVG Y+ L D I+V LTPNR DC+ ++G+A + Sbjct: 119 CSASELGLEEETSAGILELPSAAPVGEDFRTYMTLDDSTIEVDLTPNRGDCLSIKGMARE 178 Query: 178 LVAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 + G L + + P + E+ P+ + +D+ C + +KGV Sbjct: 179 V-----GVLNRLPVEGPSVAPVASVHEETFPVRV----EDTEGCPRYLGRVIKGVDVTAE 229 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G+RSI +VDITNYV L+ G P H FD + + + VRRA GE+++ Sbjct: 230 TPLWMVERLRRSGIRSIDPVVDITNYVMLELGQPLHAFDRANLDGAVVVRRARQGEQLVL 289 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q L+ D ++IA + +I G++GG+H+G +T D+ +E A + P+ +A + Sbjct: 290 LDGQTITLNGDTLIIADERGPLAIGGVMGGEHSGVSVDTRDIFLEAAHFSPLAVAGQARA 349 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFM 407 G+ TD+ +RFERGVD + + +L+L + GG A + A + + P R++V Sbjct: 350 YGLHTDASHRFERGVDPRLAREAAERATALLLEITGGEAGPLIEAADESKLPDDREVVLR 409 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + + +P ++ ILERLG SV + + VPSWR D+ + DL+EE+ RI+ Sbjct: 410 RTRLDQALDKVLPDDEVGEILERLGMSVERVDEGWRARVPSWRFDIAIEEDLIEEVARIH 469 Query: 468 GVDQIKS-EPLPL--TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVL 523 G +Q+ + P L + +++ L R R V SR E V +SF++ + Q L Sbjct: 470 GYNQLPARHPRALLGPRPDNEARTPLSALRQRMV-----SRGYFEAVTYSFVAPDLQETL 524 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 + + NPIS+D+S MR SL PGL++A N++R +FE V+ + + Sbjct: 525 LPEAVSPV-LANPISSDLSVMRASLFPGLVRALEHNLNRQQNRVRLFETGLVFRGELDDL 583 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q M + GS EG WS E+ VD FD K D S+IE ++ RFE Sbjct: 584 DQVPMLGALICGSREPEG----WSGGKEQ----VDFFDLKGDLESLIEMGGEAEAWRFEP 635 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 GA HPG+ + + G+ G HP + GL FEV LD++ Sbjct: 636 GAHPALHPGQCARVMYRGQEA-GWIGTLHPAVRARLGLKTDALLFEVRLDAL-----THG 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 + LS V+RDLAF+VD P L++ ++ + + +FDV+QGK + EG Sbjct: 690 RVPAFKPLSRYPEVRRDLAFLVDAEQPVQALLDTLRAQAGEWLVEAHLFDVYQGKGVPEG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KSVA+ + Q T DD+I L+D IVE A LR+ Sbjct: 750 RKSVALGLTWQHPSRTLNDDEINQLVDAIVEESRLHLGAELRA 792 >gi|238757778|ref|ZP_04618961.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia aldovae ATCC 35236] gi|238704021|gb|EEP96555.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia aldovae ATCC 35236] Length = 795 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 266/816 (32%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ +D + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALAHQITMAGLEVDGIDAVAGEFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRLGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DA +G L +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPLDASIGADLREYLYLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +IS P+++ +I +D C + VKG+ + P WMR++ Sbjct: 180 AVVNQLVLTEPDIS-PVAA-TIKDTFPIRVDAPQACPRYLGRVVKGINIKASTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A E++ LD L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIDGEIIVRMAAEAEELTLLDGTNAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA R ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 SADTLVIADKQRALAMAGIFGGEHSGVNEETQNVLLECAFFNPLSITGRARRQGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + + + P + I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLLDICGGEAGPVIDVTSEEHLPTRATIRLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V + IL RLG V + D +E PSWR D+E + DLVEE+ RIYG + I Sbjct: 418 GHQVSSKQVSDILRRLGCQVTEQGDNWEAIAPSWRFDMEIEEDLVEEVARIYGYNNIPDA 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V K +LSL++ VK +L R E + +SF+ + L GQ L Sbjct: 478 PVRADLVMTKHREADLSLKR-----VKTLLVDRGYQEAITYSFVDPKIQALLHPGQEPLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS DMS MR SLL GLL A N +R + +FE + DT Q M Sbjct: 533 LPSPISIDMSAMRLSLLTGLLTAVVYNQNRQQSRLRLFESGLRFVPDTTADLGVRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ +G + + + + VD +D K D +++E L ++F + + S Sbjct: 593 AGVI--------AGHCFEEHWDLARQPVDFYDLKGDLEAILELTGKLSDVQFRAESHSAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FEV + + + Sbjct: 645 HPGQSAAIYLLGERI-GFIGVVHPELERKLDLNGRTVVFEVQWNKL-----ADRAVPQAS 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + R VE + ++ A LR Sbjct: 759 SLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|194366573|ref|YP_002029183.1| phenylalanyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia R551-3] gi|194349377|gb|ACF52500.1| phenylalanyl-tRNA synthetase, beta subunit [Stenotrophomonas maltophilia R551-3] Length = 802 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 265/816 (32%), Positives = 424/816 (51%), Gaps = 37/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ T S E++ LT+IGLEVE+V E L + +++ R+P+ D Sbjct: 10 MKFSENWLRSHVPTTASREELSAVLTAIGLEVEEVTALGEGLEHVVVARIVEAVRHPEAD 69 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ES GM+ Sbjct: 70 RLQVCRVDAGQGELLQIVCGAPNARPGLVAPLAMVGAQIGE--LKIKPAKLRGVESNGML 127 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +D++ ++ELP DAPVG L +YL L D I++ LTPNR+DC +RGIA D+ Sbjct: 128 CSAKELGLDNDASGLLELPDDAPVGQTLVEYLGLPDASIEIKLTPNRADCFSLRGIAYDV 187 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNVA--PN 232 AA + + ++E+IP E+ LD + + ++GV N A P Sbjct: 188 AAATRSDVLD------FTAEAIPAVGSHELAIQLDAGAEAPRYLGRVIEGV-NAAARTPL 240 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM +RL+ G+R +S LVDIT YV L+ G P H +D + + VRR+ +GE + LD Sbjct: 241 WMAERLRRSGVRPVSLLVDITQYVMLELGQPMHAYDLGTLQGSIAVRRSRAGESLKLLDG 300 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 ++ L +V+ R +AG++GG D TT V +E A + P I G+ LG+ Sbjct: 301 RDAALDDSFLVVTDADRAVGLAGLMGGFDTRVTDTTTAVFLEAAHFAPAAIMGRGRKLGL 360 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSE 410 TD+ +RFERGVD +++ L+L L GGT + + + + KP I+ + Sbjct: 361 HTDAGHRFERGVDPALPRTAIEYATRLVLDLAGGTPAPVTEAVRADDLPKPATIMLRRAR 420 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R+ GI + + RIL LG V D ++V+ PS R D+ + DL+EE+ RI+G + Sbjct: 421 ITRVLGITIEDAEVERILRALGMDVSATADGWQVAAPSRRFDIAIEEDLIEELARIHGYE 480 Query: 471 QIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 QI P L + + S Q V+R L +R E VN++F+ + Sbjct: 481 QI---PTTLPGGASRVAMPSETQLDALSVRRQLIARDQQETVNFAFVDDALLTQWRLRDS 537 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP+SA+++ MR SLLPGL+ GRN R + +FE+ V+ +GQ Sbjct: 538 LVPLANPLSAELAVMRPSLLPGLVATLGRNAARQLGRVRLFEIGRVFAQQVGDGQPAPLE 597 Query: 590 GIRKGSSGI-EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 R ++ E W + R VD D K D S+ S L F ++ Sbjct: 598 TPRVAAAVCGEAQAVQWGLPT----RKVDFHDLKGDLESLAA--ASGAVLEFRPSDRAYG 651 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HP RS + + +G+ G+ HP + + + FE LD P+S ++ + + Sbjct: 652 HPARSAEVFRDG-VAIGWIGQIHPRLAKAMDIEADVYAFE--LDLEPLSARRLPRAGE-- 706 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 LS V+RDLAF+V + + L ++ L+ D+ +FD + G+ + G KS+A+ Sbjct: 707 -LSRFPAVRRDLAFLVPEQVAWAELAATVRQAAGPLLRDLNLFDRYVGQGVEPGFKSLAM 765 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T D D+ ++ V + ++ +A +R Sbjct: 766 GLILQDKSRTLTDRDVDAVVAEAVTAIEREHHARIR 801 >gi|330829619|ref|YP_004392571.1| Phenylalanyl-tRNA synthetase subunit beta [Aeromonas veronii B565] gi|328804755|gb|AEB49954.1| Phenylalanyl-tRNA synthetase, beta subunit [Aeromonas veronii B565] Length = 795 Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust. Identities = 270/824 (32%), Positives = 430/824 (52%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SW+ + + T++S + + +T GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSKSWVMEWVRTELSDNALAEQITMAGLEVDAVEAVAGQFNNVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGEAELLDIVCGAPNCRQGLKVCVAKVGATLP-GDFTIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP DAP+G + DYL L+D IDV LTPNR+DC+G+ G+A ++ Sbjct: 120 CSFSELGIDVEADGIIELPADAPIGTDIRDYLNLNDVSIDVDLTPNRADCLGIAGLAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESI-------PLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + ++ P+ ++ D C + +KG+ + Sbjct: 180 -----GVLNSVDVVEPTWAPAVATIDATFPIRVEAPAD----CPRYLGRVIKGLNLQAQS 230 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+++L+ G+RSI A+VDITNY+ L+ G P H FD + + L VRRA + E + L Sbjct: 231 PLWMQEKLRRGGIRSIDAIVDITNYLLLEYGQPMHAFDLATLEGELVVRRAHADEPMTLL 290 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E L +VIA +AGI GG G + TTD+L+E A + P++I + Sbjct: 291 DGNEVKLKETTLVIADAKGPACMAGIFGGNRTGVSETTTDILLECAFFAPLSITGRARAY 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 G+ TDS +RFERGVD + V+ L+L +CGG A + ++ + P+ I Sbjct: 351 GLHTDSSHRFERGVDPELQAKVMDRATRLLLDICGGEAGPVIEVKSDAHLPKAAPIKLRR 410 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S++ ++ GI V + IL RLG V + D + PSWR D+ + DL+EE+ RIYG Sbjct: 411 SKLDKVIGISVADAQVVEILTRLGMQVTVDADGWTALAPSWRFDIAIEEDLIEEVARIYG 470 Query: 469 VDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFG 525 + I + L VE Q + V+ +L R E + +SF+ K Q LF Sbjct: 471 YNNIPNLKPAASLAMVEQAEG----QVTLKRVRDLLVDRGFQEAITYSFVDPKTQQTLF- 525 Query: 526 GGQRELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPE 582 Q + +L NPIS +MS MR SL PGL++A N +R +FE + + + Sbjct: 526 -PQSDAIVLPNPISVEMSAMRVSLFPGLVQAVVYNQNRQQPRVRLFEQGLRFIKDESAEN 584 Query: 583 G--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 G Q+ M AGI G+ S W K+ R D FD K D +V++ + F Sbjct: 585 GIRQEPMLAGIITGNQ----SDEHWDIKT----RAADFFDLKGDLEAVLDLTAEGATFTF 636 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 E S HPG+S I + EI+ G+ G HP++ GL + FE+ LD + Sbjct: 637 ERTEHSALHPGQSAAILRNGEII-GHIGVIHPSLEKKLGLKSRAVMFELELDKL-----T 690 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 K +S +RD+A +VD+ + AG ++ +IK V + + +FDV+QG + Sbjct: 691 PAKVPVAAEVSKFPANRRDIAVVVDRQVLAGDVLAVIKKVGGNQVVGINLFDVYQGAGMA 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 E KKS+AI +++Q + T + +I +D +V + ++ NA LR Sbjct: 751 EDKKSLAISLVLQDTQRTLEEKEIAETVDNVVRALGEELNASLR 794 >gi|149374484|ref|ZP_01892258.1| phenylalanyl-tRNA synthetase beta subunit [Marinobacter algicola DG893] gi|149361187|gb|EDM49637.1| phenylalanyl-tRNA synthetase beta subunit [Marinobacter algicola DG893] Length = 790 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 268/817 (32%), Positives = 434/817 (53%), Gaps = 40/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + D +T GLEV+ + S + +V+SV +PD D Sbjct: 1 MKFSEQWLREWVNPANDTQALMDQITMAGLEVDGFEPVAGKFSGIVVGEVVSVSPHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + T Q +QVVCGAPNVR GL +A G+ +P + + K+RG S GM+C Sbjct: 61 KLRVCQVTDGAQTVQVVCGAPNVRDGLKVPFAVVGAVLP-GDFKIKKAKLRGQPSEGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE EL LSD +MELP +APVG LS++L+L+D IDV LTPNRSDC+ ++GIA ++ Sbjct: 120 SESELGLSDSHDGLMELPDNAPVGQELSEFLKLNDVTIDVDLTPNRSDCLSIKGIAREV- 178 Query: 180 AAGLGKLKEINISCP--LSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 G L + + P L E++ E+ + D C + ++ V ++ +P WM+ Sbjct: 179 ----GVLNSLVVEGPEILPVEAMHSEVPAITVKDPEGCPRYLGRILRNVDLSIESPLWMQ 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI A VD+TNYV L+ G P H FD I + VRRA GEK++ LD QE Sbjct: 235 EKLRRSGIRSIDAAVDVTNYVMLELGQPLHAFDREEIEGGIVVRRATQGEKLVLLDGQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L+PD +VIA + +IAG++GG+H+G + T D+++E A +DPI +A ++ G+ TD Sbjct: 295 ELTPDTLVIADHAKPIAIAGVMGGEHSGVSERTRDLILEAAYFDPITLAGKARHYGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKR 413 + +RFERGVD + ++ +L++S+ GG DI +++ + R + + V Sbjct: 355 ASHRFERGVDYELARDAMERATALLMSIVGGEPGDIVEVVSKQDLPEDRTVDLRETRVAD 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+++ IL RLG + D + V VPS+R D+ + DL+EEI RIYG + Sbjct: 415 VLGLEIDRTTVEEILTRLGLHIDKLLKDGWRVHVPSFRPDISIEEDLIEEIGRIYGYNN- 473 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQR 529 LP+T+ L Q+ R V + + E + +SF+ + L + Sbjct: 474 ----LPVTEPTGSLGLRPQEEAVRPVSAIQNYFVACGYQEAITYSFVDPKVQGLVDPERE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 + + NPIS+D+S MRTSL GLLK N +R +FE + D Q+ M Sbjct: 530 GIALANPISSDLSVMRTSLWSGLLKTVAYNQNRQQPRIRLFETGLRFIKDGDHIDQQPML 589 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 +G+ G G+L + + R R D FD K + + + + ++ S P+ Sbjct: 590 SGVVAG-------GQLPENWANGR-RSADFFDVKGELEGLFQ-LLGIEVQFLASQHPA-L 639 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG++ + E V G+ G HP + L+ I FE++L+SI K Sbjct: 640 HPGQTAELIRDGEHV-GWLGTLHPQVQKKLELNGTILMFELFLNSIVSGYVPNFKD---- 694 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V+RDLA I+ + + + K+ + + FDV+QG+SLGEG +S+A+ Sbjct: 695 -ISKFPEVRRDLAIIIGSDVGFADVERVAKKHAGEHLTALRAFDVYQGESLGEGNRSLAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + Q + T ++++ L + +++ + ++ A LRS Sbjct: 754 SLFWQHPERTLNEEEVHSLFNGVIDALREELGATLRS 790 >gi|315180367|gb|ADT87281.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio furnissii NCTC 11218] Length = 795 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/822 (33%), Positives = 423/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGTFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAEDAVIGTDFREFLALNDVTIDVDLTSNRADCFSLRGMAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + P I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVAEPAVAPVAPTIDANISIEVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPIVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D ++IA + +IAGI GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 NEAELNADTLIIADHNKALAIAGIFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS R+ERGVD ++ L++ +CGG + + A + KP + ++ Sbjct: 353 HTDSSMRYERGVDYALQHAAMERATQLLIDICGGDVAPVVAAESDADLPKPNTVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + IL+RLG SV + + + P+WR D+ + DLVEE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILQRLGMSVETTAEGWTATAPTWRFDIAIEQDLVEEVGRIYGYD 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P + N++L + +KRV L R E + +SF+ EQ L Sbjct: 473 NIPNQA-PAAAL----NMNLHKEANLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLIVPD 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG-- 583 L + NPISADMS MR SL+ GLL N R +FE + + + G Sbjct: 528 VEPLILPNPISADMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEQGLRFIPDQAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +++E + + F + Sbjct: 588 QEPMLAGVISGTRGEEH----WNLETAT----VDFFDLKGDVEAILELTANGKAYSFAAA 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I + + G G HP + FGL+ FE+ +I TK Sbjct: 640 KHPALHPGQSAAIVLDGKTI-GVIGTVHPELERKFGLNGRTIVFEIEWSAI------NTK 692 Query: 704 T-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEG 761 + V LS +RD+A +VD + +G +V ++ + D +FDV+ GK + +G Sbjct: 693 VIPEAVALSKFPSNRRDIAVVVDDAVASGDIVKACLEQGGEFLKDAKLFDVYVGKGVEDG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T D DI ++ IV +V K A LR Sbjct: 753 KKSLAIALTLQSAERTLEDADIAGAVEAIVAHVSAKFGATLR 794 >gi|254491820|ref|ZP_05104999.1| phenylalanyl-tRNA synthetase, beta subunit [Methylophaga thiooxidans DMS010] gi|224463298|gb|EEF79568.1| phenylalanyl-tRNA synthetase, beta subunit [Methylophaga thiooxydans DMS010] Length = 791 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 260/818 (31%), Positives = 437/818 (53%), Gaps = 41/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S +++ + LT+ GLEV+ V+ + I +V +VE +PD D Sbjct: 1 MKFSEKWLREWVNPSLSTDELVEKLTNAGLEVDAVEPVAGEFNGVLIGQVKTVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +++VCGA NVR GL A G+ +P N + K+RG+ S GM+ Sbjct: 61 KLRLTKVDVGADELLEIVCGASNVREGLKIPVAVIGAVLP-GNFKIKQAKLRGVPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L+D + +MEL APVG + DYL+L D ID+ LTPNRSDC+GV G+A ++ Sbjct: 120 CSSKELGLTDSADGLMELADTAPVGIDIRDYLDLDDVAIDIDLTPNRSDCLGVAGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 + +N + +S + + D+ C + + + P WM ++ Sbjct: 180 GVLTSTDVCAVNNTDVAASTDSVFPVVVEAHDA--CPRYLGRVIDDINPQAETPLWMYEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ GLRS+ +VD+TNYV L+ G P H FD ++ LTVR A SGEK+ LD QE +L Sbjct: 238 LRRSGLRSLGPVVDVTNYVMLELGQPMHAFDLDKLQGQLTVRHARSGEKLTLLDAQEIEL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D ++IA D ++AG++GG + +TT + +E A + P IA ++ G+ TDS Sbjct: 298 QSDTLLIADDNGPLALAGVMGGLDSSVTASTTKLFLEAAFFAPEAIAGKARSYGLHTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSEVKRLS 415 +RFERGVD ++ +L+L + GG A + + + +P I + + R+ Sbjct: 358 HRFERGVDTALAKLAIERATALLLDIVGGKAGAVTEKSSESTLPQPASIHLREARIARVL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ L RLG + D ++V+VPS+R D+ + DL+EE+ R+YG D+ Sbjct: 418 GINLDEAQVEEQLSRLGLVLNRVSDGWQVTVPSFRFDLAIEVDLIEELGRLYGYDK---- 473 Query: 476 PLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQREL 531 LP T+ + N++ + ++ ++ VL R E V +SF+ K Q +L + Sbjct: 474 -LPKTRPQGTVLTTNITEKATQLERLQNVLIDRGYYEAVTYSFVEPKMQQLLAENELDPI 532 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 ++ NPISAD+S MRTSL PGL++A N +R +FEV V++ + +++ G Sbjct: 533 KLANPISADLSVMRTSLWPGLVQALVYNANRQHERVRLFEVGRVFKGNLENIEQHRQIG- 591 Query: 592 RKGSSGIEGSGRLWSDKSEE----RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G ++ D+ E + R VD FDAKAD +++ ++ +RFE+ Sbjct: 592 ----------GLIYGDRYPEQWSQKQREVDFFDAKADVEALLS--IAGGDVRFEADTHPA 639 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ + + + + G+ G HP + L+ + FE+ L ++ +Q + Sbjct: 640 LHPGQTARVYKNGDAI-GWLGAIHPKLNKSLDLNGKVYVFELGLSAVLAAQVPEFEA--- 695 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS ++RDLA +VD + AG + + + KN ++ +FDV+ G + GKKS+A Sbjct: 696 --LSKFPAIRRDLALLVDNSVTAGQIEHCLSKNDSDILKSFQLFDVYSGDGVEHGKKSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +Q + T D+++ L+ + E + + A +RS Sbjct: 754 VAFHLQHAERTLTDEEVDALIKTVTETLEQSVGAAIRS 791 >gi|260582473|ref|ZP_05850264.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae NT127] gi|260094453|gb|EEW78350.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae NT127] Length = 795 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 439/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVASTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVTCATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVAQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|319786726|ref|YP_004146201.1| phenylalanyl-tRNA synthetase subunit beta [Pseudoxanthomonas suwonensis 11-1] gi|317465238|gb|ADV26970.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudoxanthomonas suwonensis 11-1] Length = 805 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 270/827 (32%), Positives = 430/827 (51%), Gaps = 51/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ T + + + TLT+IGLEVE+V + L+ + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVSTLANRDGLAATLTAIGLEVEEVTALGDGLAGVVVGRIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN RVGL A GS + M + K+RG+ES GM+ Sbjct: 61 RLQVCKVDIGNGEPLQIVCGAPNARVGLAAPLATVGSNV--GGMSIRAAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ ++ELP DAPVG L+ YL L D I++ LTPNR+DC VRGIA D Sbjct: 119 CSAKELGLDSDASGLLELPADAPVGQPLAGYLGLPDASIEIKLTPNRADCFSVRGIAYD- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 VAA LG E+ P+ + +P ++ L+ F ++GV A P W Sbjct: 178 VAAALG--SEV---APMDNAPVPAATDATVEVALEAGERVPRFVGRVIEGVDPAAATPVW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ G+R IS LVD+T YV L+ G P H FD ++ + VR A GE + LD + Sbjct: 233 MAERLRRSGVRPISLLVDVTQYVMLELGQPMHAFDLDKLEAPVVVRPARQGEVLKLLDGR 292 Query: 294 EYDLSPDNVVIASD-----GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 + L + +V++ R ++ GI+GG+ D+TT V +E A W P I + Sbjct: 293 DATLDGEFLVVSDSRGGRGARAVAVGGIMGGEDTKVGDSTTRVFLEAAHWVPSAIIGRSR 352 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVF 406 LG+ TD+ +RFERGVD + +++ LIL + GG + P+ I Sbjct: 353 RLGLHTDAGHRFERGVDPELPREAVEYATRLILDIAGGRPGPVTESTVAGALAAPQPIAL 412 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + R+ G ++ + RIL LG V + ++V+ PS R D+ + DL+EE+ RI Sbjct: 413 RRARIARVLGTEIADAEVERILRALGMDVAATAEGWQVTAPSRRFDIAIEEDLIEELARI 472 Query: 467 YGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +G D+I + P +V L ++ R R L SR +E V ++F+ + +G Sbjct: 473 HGYDRIPATIPAGPARVAAASETVLPEADLR---RHLVSRDYLEAVCFAFVDQRLLEAWG 529 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + + + NP+SA+++ MR LLPGL+ A RN R +FE+ V+ D G++ Sbjct: 530 CTEGTVPLANPLSAELAVMRPRLLPGLVDALARNAARQAGRVRLFELGRVFAAD---GER 586 Query: 586 YMAAGIRKGSSGIE--GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 A + + I G+ +++ ++ R +D D K D S+ S L F Sbjct: 587 QPGAPAPRETRRIAAVACGQSIAEQWGQKARPLDFHDLKGDLESLAAQ--SGAQLAFRPS 644 Query: 644 APSWYHPGRSG-IIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 A + HPGRS + +T E++LG+ G+ HP + L GFE LD P+ Q+ Sbjct: 645 AAPFGHPGRSADVYRTDLEGGEVLLGWIGQLHPRLARALELDVDAYGFE--LDLEPLQQR 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 + + LS V+RDLAF+V + + L ++ ++ ++ +FD +QG + Sbjct: 703 ALPRAQA---LSRFPAVRRDLAFVVAEQVAWADLAASVRAAAGEVLRELQLFDRYQGPGV 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 G KS+A+ +++Q D+ R L D+ + VV + A L SS Sbjct: 760 ESGFKSLAMGLILQ--------DNTRTLTDQDADAVVSRVVAALDSS 798 >gi|28199778|ref|NP_780092.1| phenylalanyl-tRNA synthetase subunit beta [Xylella fastidiosa Temecula1] gi|182682528|ref|YP_001830688.1| phenylalanyl-tRNA synthetase subunit beta [Xylella fastidiosa M23] gi|32130094|sp|Q87AB6|SYFB_XYLFT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28057899|gb|AAO29741.1| phenylalanyl-tRNA synthetase beta chain [Xylella fastidiosa Temecula1] gi|182632638|gb|ACB93414.1| phenylalanyl-tRNA synthetase, beta subunit [Xylella fastidiosa M23] gi|307578806|gb|ADN62775.1| phenylalanyl-tRNA synthetase subunit beta [Xylella fastidiosa subsp. fastidiosa GB514] Length = 792 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 264/806 (32%), Positives = 424/806 (52%), Gaps = 38/806 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++H + + + TLT+IGLEVE V EAL + ++++V +P+ D Sbjct: 1 MKFSENWLRNHAPIQANRDVLVATLTAIGLEVENVAVLGEALDLILVARIVNVVPHPESD 60 Query: 60 C-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D + +Q+VCGA NVR GL+ A G+ I + + +RGIES GM+ Sbjct: 61 LLQICQVDVAQDTLLQIVCGASNVRPGLVVPLALLGAKI--GALTIKSTTLRGIESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +++ +MELP DAP+G L+DYL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDTEASGLMELPEDAPIGTPLADYLALPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ +I +S+ ++P+E+ + C C ++G+ P WM Sbjct: 179 AAACASEVTPFHIDEIPAVSARTLPVELHAGANAPRYCG----CVIEGIDPAAPTPVWMA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VR + + E + LD + Sbjct: 235 ERLRRSGIRPVSLLVDITQYVMLELGQPMHAFDVDTLRGPIGVRLSRNDEALKLLDGRTV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +V+ + ++AG+IGG D T +V +E A + P I G+ LG+ TD Sbjct: 295 VLDNDFLVVTDADQPIALAGLIGGWETRITDTTINVFLEAAHFAPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD + LIL L GG + + Y P I+ + + R Sbjct: 355 ASHRFERGVDPALPPQAIAFATRLILELAGGKPGSLIHVQLPEYLPAPASILLRRTRIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L GI + + RIL+ LG V + + + V PS R D+ + DL+EE++RI G + + Sbjct: 415 LLGIVIDDAEVERILQALGMQVTTQAEGWRVVAPSRRFDIAIEEDLIEELVRIRGYEHLP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P+ + + L + V+R L +R + E +N++FI E + ++ Sbjct: 475 TALPVGASHIAMPSETRLDMTS---VRRQLIARELQETINYAFIDAELLRRWQLNTGQVM 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 ++NP+SA+++ MR LLPGL+ A GRN+ R + +FE+ +V+ G AA + Sbjct: 532 LMNPLSAELAVMRPRLLPGLVAALGRNIARQLERVRLFELGNVFTASDEAG----AAPLE 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G ++ + E+ R VD +D K D S+ S L F S A W HPGR Sbjct: 588 TRHVAAAVCGDAFALQWGEQVRKVDFYDLKGDLESLAA--ASGAVLTFHSSAQPWGHPGR 645 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S + ++ +G+ G+ HP + ++ + FE+ L+ + R + LS Sbjct: 646 SADVWCD-DMCIGWIGQLHPALTQTLEINVDVIAFELALEPL-----VRRALPRAHALSR 699 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 V+RDLA +V +H+ L +++V L+ DV +FD + GK + G KS+AI +++ Sbjct: 700 FPFVRRDLACVVPEHVTWSELAITVRDVIGPLLRDVKLFDRYVGKGIEPGFKSLAIGLIL 759 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKK 797 Q DD R L+DR V++++ K Sbjct: 760 Q--------DDTRTLIDRDVDDIMTK 777 >gi|269124007|ref|YP_003306584.1| phenylalanyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] gi|268315333|gb|ACZ01707.1| phenylalanyl-tRNA synthetase, beta subunit [Streptobacillus moniliformis DSM 12112] Length = 806 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 274/835 (32%), Positives = 454/835 (54%), Gaps = 62/835 (7%) Query: 1 MKFTLSWLKDHLDTD--VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPD 57 M +L+WL++++D D + ++++ + LT IG EVEK++ + E L+ KVL +P+ Sbjct: 1 MLISLNWLREYIDLDKNIDIKELENALTMIGQEVEKIEKQGEHLTKVLTAKVLEKIPHPN 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D +I ++D G+ + QV+CGAPN +VG + A G+ + E ++ KIRG ES G Sbjct: 61 SDHISICQVDNGEKVQ-QVLCGAPNHKVGDIVAMAQIGAELEEG-FVIKKAKIRGEESNG 118 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CSE EL + D IM LP D +G L++YL L D I ++ +TPNR DC+ GIA Sbjct: 119 MLCSEAELKIGKDHDGIMILPQDTKLGIPLNEYLGLDDIIFELEITPNRPDCLSHIGIAR 178 Query: 177 DLVAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 +L A KL+ E+N++ E I + I+ L + L + +KGV+ +P W+ Sbjct: 179 ELAAYYSKKLRLPEVNVNVE-DREDIDISIEEGLSNRYLAR-----VIKGVKVEKSPEWL 232 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 + RL+AVG+RSI+ +VDI+NYV L+ P+H+FD ++ S +T+ +A EK + LD + Sbjct: 233 KNRLEAVGIRSINNIVDISNYVMLETNQPNHIFDFNKFNSKKVTITKAKDDEKFVTLDQK 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L+ +++VI + + ++AG++GG D+N+TD+L+EVA +D I + ++ + + Sbjct: 293 ERILNNEDIVIGNGEKTVALAGVMGGMDVEVDENSTDILIEVAHFDNIMVRKTNRKFALS 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS--EV 411 T++ YRFER V+ + M V+ I SLI + GG + I N KP V S + Sbjct: 353 TEAAYRFERAVNTENMEYVMNRITSLIKEIAGGKVCN--INDNYPVKPEIKVSTLSLPRL 410 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G ++ + L I E+L + + D+ ++ PS RQD+ + D EE++R+ G D Sbjct: 411 YRFIGKEIEKDKILDIFEKLEIKIEDKGDEILLTAPSHRQDLINQFDYFEEVIRMVGFDS 470 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFISKE--QSVLFG- 525 I++ +P + +R + TR+V K+++++ M EV+N+SFI K + +LF Sbjct: 471 IEN-VMPSVNLTKER----LEDTTRFVTDIKKIVSNLGMREVINYSFIPKNSLEKILFEI 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 +EI NPI + S +R +L+ L+K N++R D FEVS + ++ Sbjct: 526 HSDNIIEIKNPIVEEFSILRPTLMYSLIKNVRDNINRGATDIRFFEVSKRFTKESTNKVN 585 Query: 584 ------------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE- 630 +K A I GS +W+ K E D +D K ++ E Sbjct: 586 EKSVLIDEMQVFEKETLALILSGSK----IKNIWNAKPEN----YDFYDLKGVVEAIFEK 637 Query: 631 -PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFE 688 F R E+ A YHPGRS + E++ Y GE HP++L+ + N I E Sbjct: 638 LKFTKYQIRRSENKA---YHPGRSVDVFVGKELIASY-GELHPDVLENMDVEKNNILYAE 693 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVT 748 +YLD I +K + K LS V RD+A +V++++ G ++ I+ +D LI+ V Sbjct: 694 IYLDLI---KKYISNNVKYKGLSKYQSVPRDIALVVNENVLVGDMIKTIEKIDNLIEKVE 750 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FD++QG + +G KSVAI ++++ T + +I +M +I+ + K AVLR Sbjct: 751 LFDIYQGLGIEKGYKSVAISIIMRDDNKTLEEKEINDIMTKIINKLNKDFGAVLR 805 >gi|261211052|ref|ZP_05925342.1| phenylalanyl-tRNA synthetase beta chain [Vibrio sp. RC341] gi|260840027|gb|EEX66627.1| phenylalanyl-tRNA synthetase beta chain [Vibrio sp. RC341] Length = 795 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 268/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I ++ + C + VK V V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIEVKAPAACPRYLGRIVKNVNVQVQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVATTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIVVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + +GK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEKGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQYGAALR 794 >gi|147673806|ref|YP_001216790.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio cholerae O395] gi|262169459|ref|ZP_06037151.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae RC27] gi|146315689|gb|ABQ20228.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|227013137|gb|ACP09347.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae O395] gi|262022272|gb|EEY40981.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae RC27] Length = 795 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 419/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I P N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NI-----PNQASVAALNMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|255004452|ref|ZP_05279253.1| phenylalanyl-tRNA synthetase beta chain (pheT) [Anaplasma marginale str. Virginia] Length = 779 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/812 (33%), Positives = 430/812 (52%), Gaps = 52/812 (6%) Query: 10 DHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRI 65 DHLDT+ S + D L+ +G+E E + + +PF + +V +V+ +P D C + Sbjct: 2 DHLDTEWSASAVADELSRLGIEAELLHEGQDPAPFVVARVGAVKPHPSADKLKVCEVF-- 59 Query: 66 DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELM 125 D H +QVVCGA NVR G+L V A G+ +P + +RG++S GM+CS EL Sbjct: 60 DGADH--MQVVCGASNVREGMLSVLARCGAVMPNGGPTIVEAVLRGVKSHGMLCSADELG 117 Query: 126 LSD---DSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA 181 + + I++LP D VG D LS +I+V +TPNR DC+G+RGIA +LVAA Sbjct: 118 VQGWRAQDSGILDLPSSDYEVG----DSFFLSGAVIEVGVTPNRGDCLGLRGIARELVAA 173 Query: 182 GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-CVKGVRNNV-APNWMRQRLK 239 G+G L+ PL + + + + ++ G M +K ++N +P W++ RL Sbjct: 174 GVGALR------PLPVDDLEVFGRSPIEAEMRSAGVLMGRYIKSIKNTGDSPRWIKDRLI 227 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 + G+++IS +VDI NYV L P HV+DA +I V A S ALD ++Y LS Sbjct: 228 SAGVKTISCVVDIVNYVMLVLNRPMHVYDADKIQGGKLVVGASSNTDFHALDGKKYTLSK 287 Query: 300 DNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 DN+V+ G + IAG+IG +GC ++ ++ +E A +DP++IA S + L + TDS Sbjct: 288 DNLVVTDGAGVVHCIAGVIGSTLSGCTLDSENIFLESAWYDPVDIAMSARKLKLSTDSSC 347 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 RFER D + L +I+ CGG ASD+ + +++ N + V + + Sbjct: 348 RFERFTDPGCVKLGLDFASHMIVKYCGGVASDVVACGETPFSEGRVISFNPDSVGVIGSV 407 Query: 418 DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSE 475 ++ E+ LRIL LGF V + D+ +EVSVPSWR DV D+VEE+LR++G D+++ + Sbjct: 408 EIEREEILRILTALGFDVNADKDRQWEVSVPSWRLADVRSSFDVVEEVLRMHGYDKVQEQ 467 Query: 476 P-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P +P + N + S ++ S + EVV WSF+S + G +L + Sbjct: 468 PVVPCIAGPNGCNYDEKLS------LIMLSAGLTEVVTWSFMSGAVAEKLGYNIEDLCVE 521 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S MR SLLP LL+ N AIFE+ VY E ++ + G+R G Sbjct: 522 NPVSNKFDVMRPSLLPNLLQTAASNQACGCESVAIFELGEVYRF-LDESERSI-CGVRSG 579 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYHPGR 652 + R D FDAK D L V+ + +D + F S S+ HP R Sbjct: 580 DN--------VPRNPHGATRKFDFFDAKCDVLQVLTQ-LGIDGRLVEFRSCDRSYMHPAR 630 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S + +I+ GY GE HP+++ FF + + FE++L IP T + +VH Sbjct: 631 SADVYFR-DILCGYVGELHPDLIGFFEMRSAAACFEIFLSRIPNVDDNPTGDEFLVH--K 687 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PVKRD AF++DQ + + LV+++ + + +V+VFD + G ++ EGK S+A+ V++ Sbjct: 688 YQPVKRDFAFVLDQGVQSQALVDVVGCIPG-VAEVSVFDFYCGDNIPEGKVSIAVAVVMI 746 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + +I+ + +RI+ V +K LR+ Sbjct: 747 SKVGTMTESEIKDVSERIIALVAQKLGGELRA 778 >gi|255003328|ref|ZP_05278292.1| phenylalanyl-tRNA synthetase beta chain (pheT) [Anaplasma marginale str. Puerto Rico] Length = 779 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 273/812 (33%), Positives = 430/812 (52%), Gaps = 52/812 (6%) Query: 10 DHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRI 65 DHLDT+ S + D L+ +G+E E + + +PF + +V +V+ +P D C + Sbjct: 2 DHLDTEWSASAVADELSRLGIEAELLHEGQDPAPFVVARVGAVKPHPSADKLKVCEVF-- 59 Query: 66 DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELM 125 D H +QVVCGA NVR G+L V A G+ +P + +RG++S GM+CS EL Sbjct: 60 DGADH--MQVVCGASNVREGMLSVLARCGAVMPNGGPTIVEAVLRGVKSHGMLCSADELG 117 Query: 126 LSD---DSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA 181 + + I++LP D VG D LS +I+V +TPNR DC+G+RGIA +LVAA Sbjct: 118 VQGWRAQDSGILDLPSSDYEVG----DSFFLSGAVIEVGVTPNRGDCLGLRGIARELVAA 173 Query: 182 GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-CVKGVRNNV-APNWMRQRLK 239 G+G L+ PL + + + + ++ G M +K ++N +P W++ RL Sbjct: 174 GVGALR------PLPVDDLEVFGRSPIEAEMRSAGVLMGRYIKSIKNTGDSPRWIKDRLI 227 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 + G+++IS +VDI NYV L P HV+DA +I V A S ALD ++Y LS Sbjct: 228 SAGVKTISCVVDIVNYVMLVLNRPMHVYDADKIQGGKLVVGASSNTDFHALDGKKYTLSK 287 Query: 300 DNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 DN+V+ G + IAG+IG +GC ++ ++ +E A +DP++IA S + L + TDS Sbjct: 288 DNLVVTDGAGVVHCIAGVIGSTLSGCTLDSENIFLESAWYDPVDIAMSARKLKLSTDSSC 347 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGI 417 RFER D + L +I+ CGG ASD+ + +++ N + V + + Sbjct: 348 RFERFTDPGCVKLGLDFASHMIVKYCGGVASDVVACGETPFSEGRVISFNPDSVGVIGSV 407 Query: 418 DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSE 475 ++ E+ LRIL LGF V + D+ +EVSVPSWR DV D+VEE+LR++G D+++ + Sbjct: 408 EIEREEILRILTALGFDVNADKDRQWEVSVPSWRLADVRSSFDVVEEVLRMHGYDKVQEQ 467 Query: 476 P-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P +P + N + S ++ S + EVV WSF+S + G +L + Sbjct: 468 PVVPCIAGPNGCNYDEKLS------LIMLSAGLTEVVTWSFMSGAVAEKLGYSIEDLCVE 521 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S MR SLLP LL+ N AIFE+ VY E ++ + G+R G Sbjct: 522 NPVSNKFDVMRPSLLPNLLQTAASNQACGCESVAIFELGEVYRF-LDESERSI-CGVRSG 579 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSWYHPGR 652 + R D FDAK D L V+ + +D + F S S+ HP R Sbjct: 580 DN--------VPRNPHGATRKFDFFDAKCDVLQVLTQ-LGIDGRLVEFRSCDRSYMHPAR 630 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S + +I+ GY GE HP+++ FF + + FE++L IP T + +VH Sbjct: 631 SADVYFR-DILCGYVGELHPDLIGFFEMRSAAACFEIFLSRIPNVDDNPTGDEFLVH--K 687 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PVKRD AF++DQ + + LV+++ + + +V+VFD + G ++ EGK S+A+ V++ Sbjct: 688 YQPVKRDFAFVLDQGVQSQALVDVVGCIPG-VAEVSVFDFYCGDNIPEGKVSIAVAVVMI 746 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + +I+ + +RI+ V +K LR+ Sbjct: 747 SKVGTMTESEIKDVSERIIALVAQKLGGELRA 778 >gi|270261562|ref|ZP_06189835.1| phenylalanyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] gi|270045046|gb|EFA18137.1| phenylalanyl-tRNA synthetase, beta subunit [Serratia odorifera 4Rx13] Length = 795 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 271/814 (33%), Positives = 425/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL++ ++ +S E + D +T GLEV+ V+ + +V V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVEPVAGVFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRTGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPEDAPIGTDIREYLKLNDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++S ++ + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 GVLNQVALTEPDMSPVAATINDTLPIRVDAPQA--CPRYLGRVVKGINVKAASPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD SRI + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLSRIEGGIVVRMAEEGETLTLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T DVL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKALAMGGIFGGEHSGVNDETQDVLLECAFFSPLSITGRARRQGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGQAGPVIDVTTESELPKRATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V + D + PSWR D+E + DLVEE+ R+YG + I Sbjct: 418 GHAVPSEQVSDILRRLGCQVTEQGDNWLAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R L R VK +L E + +SF+ + L G+ L + Sbjct: 478 PVRADLVMTKHREADLTLKR---VKTLLVDHGFQEAITYSFVDPKVQALLHPGEEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAG 590 +PIS +MS MR SL GLL A N +R + +FE + DT Q M AG Sbjct: 535 SPISVEMSAMRLSLWTGLLSAVVYNQNRQQSRLRLFESGLRFVPDTAANLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G + E W + VD +D K D SV+E L ++F++ A HP Sbjct: 595 VIAGHTHEEH----WDLARKP----VDFYDLKGDLESVLELTGKLSEIQFKAEANPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I E V G+ G HP + L+ FE+ + + + + + Sbjct: 647 GQSAAIYLQGERV-GFIGVVHPELERKLDLNGRTVVFELEWNKVASRAVPQAR-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++ A ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVAAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGDKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + R VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|163752060|ref|ZP_02159268.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella benthica KT99] gi|161328060|gb|EDP99230.1| phenylalanyl-tRNA synthetase beta subunit [Shewanella benthica KT99] Length = 795 Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/818 (32%), Positives = 434/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S +++ +T GLEV+ ++ S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSISRDELSHQITMAGLEVDGIEGVAGEFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G+ + I +VCGAPN R+GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKINVGQDELIDIVCGAPNCRLGLKVAVAMVGAVLP-GNFKIKQAKLRGEPSLGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + DS I+ELP DAP+G + ++L L D IIDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSYGELGIDIDSDGILELPTDAPIGADIREFLSLDDAIIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGF-AMCCVKGVRNNVAPNWM 234 G L ++ P + +P I+ DL C + +P WM Sbjct: 180 -----GVLNRQAVTEPTWEKVVPSIDDSIQIDLQAPESCARYLGRVVKNVNVKVQSPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD ++++ + VR A EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLNGDIQVRMATGDEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D +VI+ + ++AGI GG+++G + T D+L+E A + P+ I + LG+ T Sbjct: 295 ITVPADMLVISDQEKSLALAGIFGGEYSGVNSETQDILLECAFFAPLAILGKTRRLGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 DS +RFERGVD + V+ L+L +CGG A + A++ + KP I S++ Sbjct: 355 DSSHRFERGVDPELQHKVMDRATRLVLDICGGEAGPVVEAKSDEHLPKPVSITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + ++ IL+RLGF+V +++ V ++R D+ + DL+EE+ RIYG + I Sbjct: 415 RILGHHISDDEVTEILQRLGFAVEFTAEQWHVVTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + + R V+ +L +R E + +SF+ + G + Sbjct: 475 PNIAPVGSLSMPDHKESDISLKR---VRSMLVARGFQEAITYSFVDPKLQDKVHPGCEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS +MS MR SL GLL A G N R +FE + DT Q+ M Sbjct: 532 VLPNPISIEMSAMRLSLFTGLLGAVGYNQSRQQNRIRLFETGLRFVPDTSAEANVRQEPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + G+ E WS +S D FD K D ++I VS + F S + Sbjct: 592 IGAVISGNQNDEH----WSMESNT----ADFFDLKGDLEAIIGLTVSDEEFTFRSASHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + + V+G G HP++ FGL+ FE+ LD++ + + + Sbjct: 644 LHPGQCAEILRN-DRVIGIIGTVHPSLEKPFGLNGRTIIFELELDALLHANLPQAQA--- 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +VD ++ AG +V +I+ V ++L+ + +FDV+QGK + GKKS+ Sbjct: 700 --VSKFPANRRDIAIVVDDNVAAGDIVKMIRKVGQNQLV-GINLFDVYQGKGVESGKKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q T + +I ++D +V + + NA+LR Sbjct: 757 AIALTLQDNTRTLEEKEIAEMVDSVVYALKSEFNALLR 794 >gi|269966320|ref|ZP_06180407.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio alginolyticus 40B] gi|269829059|gb|EEZ83306.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio alginolyticus 40B] Length = 801 Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust. Identities = 273/825 (33%), Positives = 424/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA VG ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVVGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + +K V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAPSIDDKVSIEVKAPAACPRYLGRVIKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 NEAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADSDVVEILERLGLTVEASEEGWMAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQHPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG---QK 585 L + NPISADMS MR L+ GLL N R +FE + +T E Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCETAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EDGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|15837344|ref|NP_298032.1| phenylalanyl-tRNA synthetase subunit beta [Xylella fastidiosa 9a5c] gi|12229991|sp|Q9PFD6|SYFB_XYLFA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|9105632|gb|AAF83552.1|AE003916_6 phenylalanyl-tRNA sinthetase beta chain [Xylella fastidiosa 9a5c] Length = 792 Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/809 (32%), Positives = 426/809 (52%), Gaps = 44/809 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++H+ + + + TLT+IGLEVE V EAL + ++++V +P+ D Sbjct: 1 MKFSENWLRNHVPIQANRDVLVATLTAIGLEVENVAVLGEALDLIVVARIVNVVPHPESD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D + +Q+VCGA NVR GL+ A G+ I + + +RG+ES GM+ Sbjct: 61 RLQICQVDAAQDTLLQIVCGASNVRPGLVVPLALLGAKI--GALTIKSTTLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +++ +MELP DAP+G L+DYL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDTEASGLMELPDDAPIGTPLADYLALPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ ++I +S+ ++P+E+ + C C ++G+ P WM Sbjct: 179 AAACASEVTPLHIDEIPAVSARTLPVELHAGANAPRYCG----CVIEGIDPAAPTPVWMA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VR + + E + LD + Sbjct: 235 ERLRRSGIRPVSLLVDITQYVMLELGQPMHAFDVDTLRGPIGVRLSRNDEALKLLDGRTV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +V+ + ++AG+IGG D T +V +E A + P+ I G+ LG+ TD Sbjct: 295 VLDNDFLVVTDADQPIALAGLIGGWETRITDTTVNVFLEAAHFAPVAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD + LIL L GG + Y P I+ + + R Sbjct: 355 ASHRFERGVDPALPPQAIAFATRLILELAGGKPGSLIRVELPEYLPAPASILLRRTRIAR 414 Query: 414 LSGI---DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L GI DV +E RIL LG V + + + V PS R D+ + DL+EE++RI G + Sbjct: 415 LLGIVIDDVEVE---RILHALGMQVTTQAEGWRVVAPSRRFDIAIEEDLIEELVRIRGYE 471 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + P+ + + L + V+R L +R + E +N++FI E + Sbjct: 472 HLPTALPIGASHIAMPSETRLDMTS---VRRQLIARELQETINYAFIDAELLRRWQLNTG 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 ++ ++NP+SA+++ +R LLPGL+ A GRN+ R + +FE+ +V+ G AA Sbjct: 529 QVMLMNPLSAELAVIRPRLLPGLVAALGRNIARQLERVRLFELGNVFTASDEAG----AA 584 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + G ++ + E+ R VD +D K D S+ S L F S A W H Sbjct: 585 PLETQHVAAAVCGDAFALQWGEQARKVDFYDLKGDLESLAA--ASGAVLTFHSSAQPWGH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGRS + + +G+ G+ HP + ++ + FE+ L+ + R + Sbjct: 643 PGRSADVWCD-DTCIGWIGQLHPALTQTLEINVDVIAFELALEPL-----VRGALPRAHA 696 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLA +V +H+ L +++V L+ DV +FD + GK + G KS+AI Sbjct: 697 LSRFPFVRRDLACVVPEHVTWSELAITVRDVIGSLLRDVKLFDRYVGKGIEPGFKSLAIG 756 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +++Q DD R L+DR V++++ K Sbjct: 757 LILQ--------DDTRTLIDRDVDDIMAK 777 >gi|262402429|ref|ZP_06078990.1| phenylalanyl-tRNA synthetase beta chain [Vibrio sp. RC586] gi|262351211|gb|EEZ00344.1| phenylalanyl-tRNA synthetase beta chain [Vibrio sp. RC586] Length = 795 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 268/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIEVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNTDTLVIADQQKALAIAGVFGGEHSGVGTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A ++ PR ++ ++ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATELLVEICGGEVAPVVAAESVADLPRPNQVTLRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVATIAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAINTRVIPEAA 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 T +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 699 T-----ISKFPANRRDIALVVDGNIASGEIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|229845126|ref|ZP_04465261.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] gi|229811962|gb|EEP47656.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 6P18H1] Length = 795 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/819 (32%), Positives = 439/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKMACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRLAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDVSHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETVSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K VL E + +SF+ + L Q Sbjct: 474 IPNNAPLANLRMREHKESDLDLAR---IKTVLVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|240949159|ref|ZP_04753506.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] gi|240296462|gb|EER47098.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus minor NM305] Length = 795 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 436/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ +S E++CD +T +GLEV+ VD S I +V+S E++PD D Sbjct: 1 MKFNESWLREWVNPAISTEQLCDQITMLGLEVDSVDPVAGEFSGVVIGEVVSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRAGLKVACAVEGALLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP+DAPVG +YL L+D I++SLTPNR+DC+ +RGIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPLDAPVGVDFREYLNLNDVAIEISLTPNRADCLSIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 ++ I+ + +I ++ +L C + VK V N +P W++++ Sbjct: 180 SVINQAEVSAPEIAA--VTATISDKVAVELQAPEACPRYLSRVVKNVNVNAQSPLWLQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD L Sbjct: 238 LRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIEGAIQVRMAKEGEELVLLDGTTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA ++AGI GG+ +G T DV++E A + P+ I + G+ TD+ Sbjct: 298 QANTLVIADQKGALAMAGIFGGEASGVSKETKDVVLEAAFFAPLAITGRARQYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 +RFERGVD + ++ +L+L +CGG A +I A + + P++ K + I Sbjct: 358 HRFERGVDPELTRQAMERATALLLDICGGEAGEIVEAVSEAHLPKRNTVSLRRSKLDAVI 417 Query: 418 DVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 IED+ IL RLG +V D + PSWR D+E + DL+EE+ RIYG + I + Sbjct: 418 GYHIEDATVTDILTRLGLNVTFANDTWTAVAPSWRFDIEIEEDLIEEVARIYGYNNIPNN 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PL ++ L+ +R V+ EVV +SF+ + L Q L + Sbjct: 478 SPLSHLTMKGTPEKLLEIAR---VRAAFVDSDYQEVVTYSFVDPKIQTLLHPEQEALMLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NPIS++MS MR SLL GLL+ N +R I E + D + +G+R+ Sbjct: 535 NPISSEMSAMRVSLLTGLLETIVYNQNRQQNRVRIVETGLRFIPD-----ENAESGVRQE 589 Query: 595 S---SGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 S + I G R W K+E VD FD K D + V + L+F + A H Sbjct: 590 SVIGAAIVGDKRPVHWEHKAES----VDFFDLKGDIERIFSLTVVRNDLKFVAKAFPALH 645 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKK 706 PG+S I + + G+ G HP+++ G+ EV +I PI K Sbjct: 646 PGQSAAIMLDGKEI-GFIGTLHPSLVQKLGIKGKPIVCEVLASAIAERPIPVAK------ 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S RD+A +VD+++ AG +++ ++ D+L+ V++FDV++G +L EGKKS Sbjct: 699 --EISKFPANNRDIAVVVDENVAAGEVLDACRSSGGDKLV-GVSLFDVYRGTNLAEGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T +D+I ++ ++ ++ ++ NA LR Sbjct: 756 LAISLTVQDTEKTLEEDEINAVIQAVLADLSQRFNATLR 794 >gi|26989193|ref|NP_744618.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas putida KT2440] gi|38258491|sp|Q88K22|SYFB_PSEPK RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|24984033|gb|AAN68082.1|AE016440_2 phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas putida KT2440] Length = 793 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/826 (31%), Positives = 439/826 (53%), Gaps = 57/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ +G+ + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSSGQ-ETFQVVCGAPNARPGIKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 119 CSAAELQISEENDGLLELAADAPVGEDIRTYLSLDDASIEIGLTPNRGDCLSIAGLARDV 178 Query: 179 VAAGLGKLKEINISCPL-------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A L + ++ P+ E P+E+ + C + ++ V + Sbjct: 179 SA-----LYDTPVTRPVVPAVAAAHDEVRPVEVSA----PAACPRYLGRVIRNVDLSKPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKN 349 D QE L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI++A ++ Sbjct: 290 DGQEVALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARS 349 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFM 407 G+ TD+ +R+ERGVD Q ++ L+L + GG A + A + + P+ + Sbjct: 350 YGLHTDASHRYERGVDSQLAREAMERATQLLLDIVGGEAGPVVEAVSEQHLPQVAPVTLR 409 Query: 408 NSEVKRLSGIDV---PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + ++ G+++ +E L LE L + GE ++ VSVPS R D+ + DL+EE+ Sbjct: 410 AERITQMLGMEMDPAQVEQLLNALE-LTTTKSGE-GQWTVSVPSHRFDISLEVDLIEELA 467 Query: 465 RIYGVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 R+YG + + ++ P + E + +L ++R+L +R E + +SFI + Sbjct: 468 RLYGYNNLPVRYPQARLAPQGKPETRGDLP-------TLRRLLVARGYQEAITYSFIDPK 520 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 LF G L + NPIS+DM+ MR SL PGL+KA N++R +FE + Sbjct: 521 LFELFSPGVEPLLLANPISSDMAAMRASLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQ 580 Query: 580 TPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + Q+ M AG+ GS EG W++ + VD FD KAD +++ +L Sbjct: 581 LGDLQQQPMIAGVITGSRLPEG----WANGRDG----VDFFDVKADVEALLGYSGALSDF 632 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F +G HPG++ +I+ ++V GY G HP + GL P+ FE+ L + Sbjct: 633 TFSAGKHPALHPGQTAVIERDGKLV-GYLGAIHPELAKALGLDRPVFLFELVLGDV---- 687 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + K LS +RDLA I + + + ++ +I+ N + D+ +FDV+QGK Sbjct: 688 -VEGRLPKFSELSKFPETRRDLALIAGRDVASSAVLELIRDNAGEWLTDLRLFDVYQGKG 746 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A+ + Q T DD++ + I+ ++ ++ N LR Sbjct: 747 IDPDRKSLAVGLTWQHPSRTLNDDEVNTTLQNILTSLEQRLNTTLR 792 >gi|262171748|ref|ZP_06039426.1| phenylalanyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] gi|261892824|gb|EEY38810.1| phenylalanyl-tRNA synthetase beta chain [Vibrio mimicus MB-451] Length = 795 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/822 (33%), Positives = 422/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIDVKAPVACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVATIAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+ + II EI G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGKEI--GVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTR 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EG Sbjct: 693 VIPEAAAISKFPANRRDIALVVDGNIASGEIVEACRVAGGELLKDAKLFDVYVGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 753 KKSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQYGAALR 794 >gi|148358553|ref|YP_001249760.1| phenylalanyl tRNA synthetase subunit beta [Legionella pneumophila str. Corby] gi|296108358|ref|YP_003620059.1| Phenylalanyl-tRNA synthetase beta subunit [Legionella pneumophila 2300/99 Alcoy] gi|148280326|gb|ABQ54414.1| phenylalanyl tRNA synthetase, beta subunit [Legionella pneumophila str. Corby] gi|295650260|gb|ADG26107.1| Phenylalanyl-tRNA synthetase beta subunit [Legionella pneumophila 2300/99 Alcoy] Length = 793 Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust. Identities = 264/822 (32%), Positives = 447/822 (54%), Gaps = 49/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ ++ +++ + LT GLEV+ V+ IV +VL+ + +PD D Sbjct: 1 MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ K + +++VCGA NVR GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLP-GGLQIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ S IMEL +AP+G L +YL L D + D+ LTPNR+DC + G+A ++ Sbjct: 120 CSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVAPNWM 234 A L KL I +I ++ +L S C + C + +RN P WM Sbjct: 180 --AVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSDACPRY---CGRIIRNLNLEAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R++ +VD+ NYV L+ G P H FD S+I+ + VR + SGE++ LD QE Sbjct: 235 AERLRRGGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + ++AGI+GG ++ ++T V +E A ++P+ IA + G+ + Sbjct: 295 VVLNDNVLVIADKEKPLAMAGIMGGANSAVQEHTQHVFLESAYFNPVTIAGVARKYGLFS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM--NSEVK 412 DS RFERGVD L+ LILS+ GG + + + + P + F+ ++VK Sbjct: 355 DSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L+G+ +P+ + +LE LG +I E + FEV++PS R D+++ ADLVEEI+R+YG D+ Sbjct: 415 KLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQRE 530 ++++P+ T V+ +S ++ +V +++ E +++SF+ E Q L+ Q+E Sbjct: 475 LQAQPMQ-TSVQAGL-ISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALY--PQKE 530 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 +E+LNPIS+++S MR + PGL+ + N R FE+ V++ D + ++ Sbjct: 531 FMELLNPISSELSQMRAGMWPGLIASMIYNCHRQQTAVKFFEIGVVFDLDGGQLKERSCI 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G G WS E R D +D K D S+ + LD + F + Sbjct: 591 AGLLMGEQG----NLNWS----ESARLFDFYDLKGDLQSLFAS-LKLDDVEFIQSSHHAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I + + G+ G HP + D F L + FE+ L+S IP+ + Sbjct: 642 HPGQSAQIVINGKHS-GWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKP---- 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S ++RDL+F+VD+ I A + +I+N + + VFDV+ GK + E Sbjct: 697 ------ISKYPQIRRDLSFLVDRQISAMQIERVIRNTVKEDWLKSFDVFDVYMGKGIPED 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ + +Q T D +I + + I++ + + + +LR Sbjct: 751 KKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLR 792 >gi|148826040|ref|YP_001290793.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittEE] gi|229847461|ref|ZP_04467558.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] gi|148716200|gb|ABQ98410.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittEE] gi|229809602|gb|EEP45329.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 7P49H1] Length = 795 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 439/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGATSGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETVSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLANLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|262039013|ref|ZP_06012347.1| phenylalanyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] gi|261746923|gb|EEY34428.1| phenylalanyl-tRNA synthetase, beta subunit [Leptotrichia goodfellowii F0264] Length = 799 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 261/819 (31%), Positives = 452/819 (55%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L+WLK ++D + + ++ LT IG EVEK++ + + L + ++ V+++P+ Sbjct: 1 MLISLNWLKQYIDLEGKEVGELEKALTMIGQEVEKIEIKGDNLDNVVVGHLIEVKKHPNA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D L ++D GK + +Q+VCGA N + G A G+ + E+ + KIRG ES GM Sbjct: 61 DSLTLCKVDNGK-EILQIVCGATNHKTGDKVALAQVGAKLRED-FTIKKGKIRGEESNGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE EL + D I+ LP DAPVG L +YL ++D + ++ +TPNR DC+ GIA + Sbjct: 119 LCSEDELGIGSDKDGIIILPEDAPVGTPLKEYLGINDTVFELEITPNRPDCLSHIGIARE 178 Query: 178 LVAAGLGKLKE----INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 L A +LK IN E IK ++DS+L + + +KGV +P W Sbjct: 179 LAAYYGKELKYPKTVINKEV---QEKTSDNIKVKIEDSNLSRRYVTRILKGVTVKESPKW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 +++R++AVGLRSI+ +VD++N++ ++ +P+HVFD +I + + V+ A G+ ++ LD+ Sbjct: 236 LKERIEAVGLRSINNIVDVSNFILMEMNHPNHVFDLDKIEGNEIIVKTANKGDVLVTLDD 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE L +++VIA +I ++ G++GG + D+T +VL+EVA ++P N+ ++ + L + Sbjct: 296 QERKLENEDIVIADSKKILAVGGVMGGFDSQVTDSTKNVLLEVAHFNPQNVRKTSRRLTL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEV 411 +DS YRFERG+D++ + V+ + +LI + GG S + ++ R + Sbjct: 356 FSDSSYRFERGIDVENAVNVINRLANLIQEVAGGEILSGYAEQYPVPHENRTTGLNLERL 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G +P ++ ++ILE L V+ + + E++ PS+R D+E + D EE++R+YG D Sbjct: 416 HRFVGKVIPKKEVIKILEGLEIKVVDKGENLELTAPSYRGDLELEQDYFEEVIRMYGFDN 475 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGG--G 527 I++ LP + ++ + T VK + AS + EV+N+SFI K+ + + F G G Sbjct: 476 IEN-VLPKVNI-NESSTLDTTKLTDTVKNIAASTGLKEVINYSFIPKDGLEKIKFTGVKG 533 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + ++I NPI+ D MR +LL L+K N++R ++D FEVS +E ++ + Sbjct: 534 DKLIDISNPITEDFVTMRPTLLYSLIKNAKENINRNVSDIRFFEVSRTFEKAEELAKEEI 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 GI E LW+ K D +D K V + + + + Sbjct: 594 KLGIILAG---EKDKTLWNPKPVP----YDFYDLKGIVEEVFSK-LKFKNYSIKRSVQTE 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSIPISQKKRTKTKK 706 +HPGRS + E V G FGE HP++L+ F L+ + E +D I KK + Sbjct: 646 FHPGRSADVFVGNECV-GSFGEIHPDVLENFDLNRKSVLVGEFNIDLI----KKYIRKPF 700 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 V +P V RD+A ++++++ G ++ ++ +D+ ++ V +FD+++G + GKKSV Sbjct: 701 VYQGPVKYPAVPRDIALVMNENVLVGDVLKTVEKIDKKVEKVELFDIYRGLGVEPGKKSV 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 AI VL++ T + +I +M++I+ V K A LR Sbjct: 761 AISVLLRDNSKTLEEKEINDIMEKILNKVKKDYMAELRQ 799 >gi|161503553|ref|YP_001570665.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864900|gb|ABX21523.1| hypothetical protein SARI_01631 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 795 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 430/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I D D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKASLQEPEMTPVAATISDTLPITVDATDA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKKGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 DTDTLVIADHQKALAMGGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLLDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPDWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATAVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ LD ++F+ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLDDIQFKPEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ +S+ I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNSLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|254228388|ref|ZP_04921815.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262394476|ref|YP_003286330.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio sp. Ex25] gi|151939194|gb|EDN58025.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio sp. Ex25] gi|262338070|gb|ACY51865.1| phenylalanyl-tRNA synthetase beta chain [Vibrio sp. Ex25] Length = 801 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 271/825 (32%), Positives = 422/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAPSIDDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQHPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|168463261|ref|ZP_02697192.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195634019|gb|EDX52371.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 795 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 432/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ L+ + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELELNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|169837446|ref|ZP_02870634.1| Phenylalanyl-tRNA synthetase beta chain [candidate division TM7 single-cell isolate TM7a] Length = 799 Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust. Identities = 257/817 (31%), Positives = 452/817 (55%), Gaps = 33/817 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L+WLK ++D D + + ++ + LT IG EVEK++ E L +++ E +PD Sbjct: 1 MLISLNWLKQYIDLDGIEINEMENALTMIGQEVEKIEVLGENLENVVTAQIIEKEMHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D GK + +Q+VCGAPN + G V A G+ + + ++ KIRG+ES GM Sbjct: 61 DHLTICKVDNGK-EILQIVCGAPNHKAGDKVVLAQVGAKLAPD-FVIKKGKIRGVESNGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE+EL + DS IM LP D PVG + +YL ++D + ++ +TPNR DC+ GIA + Sbjct: 119 LCSEEELNIGKDSDGIMILPEDTPVGVPMKEYLGINDTVFELEITPNRPDCLSHIGIARE 178 Query: 178 LVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 L A ++K + + SSE I +++DS+L K + +K V +P W+++ Sbjct: 179 LGAYYNKEVKYPSFVINSESSEKTADNISVEIEDSNLAKRYVARIIKNVTVKESPKWLKE 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEY 295 R++++G+RSI+ +VD +N++ ++ P+H FD +I + VR EK++ LD QE Sbjct: 239 RVESIGIRSINNIVDASNFIMMELNQPNHTFDLDKIEGGKIVVRAGHENEKLVTLDEQER 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L+ +++VI+ + ++ G++GG+++ +NT ++L+EVA ++ N+ ++ + L + ++ Sbjct: 299 ELNSEDIVISDGVKAVALGGVMGGQNSEITENTKNILLEVANFNSQNVRKTSRRLTLFSE 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVFMNSEVKRL 414 S YRFER VD + I V+ + ++I + GG + + + YK + + R Sbjct: 359 SSYRFERRVDEENAINVINRLANIIQEVAGGEILEGVVDNYPVPYKKKTATLNFERLNRF 418 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G ++P E + IL RL V+ + ++ P++R D+E + D EE++R+YG D I++ Sbjct: 419 VGKNIPRETVIGILTRLEIEVVDNGETLTLTAPTYRDDLENEQDYFEEVIRMYGFDNIEN 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRE-- 530 LP + +K + + T+ VK + A+ + EV+N+SF+ K+ + + + +RE Sbjct: 479 -ILPKLDISEKPVIDTTKLSTQ-VKLIAANAGLKEVINYSFVPKDAMEKIKYTSVERENL 536 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +++L PI+ D +R +LL LLK N++R + FEVS + ++ + G Sbjct: 537 IDLLRPITEDFVTLRPTLLYSLLKNAKENMNRNATNIRFFEVSRTFVKAEELAKEEVKLG 596 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPSWY 648 I E + LW+ K D +D K V E F L ++ + S Y Sbjct: 597 IILAG---ENNKTLWNPKPVP----YDFYDLKG---IVEEIFTQLKFNNYMIKRSEQSQY 646 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFF--GLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS + E++ G FGE HP++L+ F G ++ + G E +D I K+ K + Sbjct: 647 HPGRSVDVFVGRELI-GSFGEIHPDVLENFDLGKTSVLVG-EFNIDLIQKYIGKKIKYQG 704 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +V + V RD AF++ + I G ++ I+ VD+ I+ V +FD++QG + G KSVA Sbjct: 705 IVKYPA---VPRDFAFVMREDILVGDVLKTIQKVDKKIEKVELFDIYQGAGVLPGMKSVA 761 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I V+++ T + +I + ++IV + K AVLR Sbjct: 762 ISVILRDKNKTLEEKEIVDISNKIVAKIEKDYGAVLR 798 >gi|52842916|ref|YP_096715.1| phenylalanyl-tRNA synthetase subunit beta [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|66773885|sp|Q5ZS09|SYFB_LEGPH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|52630027|gb|AAU28768.1| phenylalanyl tRNA synthetase, beta subunit [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 793 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 264/822 (32%), Positives = 445/822 (54%), Gaps = 49/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ ++ +++ + LT GLEV+ V+ IV +VL + +PD D Sbjct: 1 MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLDTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ K + +++VCGA NVR GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLP-GGLQIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ S IMEL +AP+G L +YL L D + D+ LTPNR+DC + G+A ++ Sbjct: 120 CSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVAPNWM 234 A L KL I +I ++ +L S C + C + +RN P WM Sbjct: 180 --AVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRY---CGRIIRNLNLEAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R++ +VD+ NYV L+ G P H FD ++I+ + VR SGE++ LD QE Sbjct: 235 AERLRRGGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYGVSGEQLELLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + ++AGI+GG ++ + T V +E A ++P+ IA + G+ + Sbjct: 295 VVLNDNVLVIADKEKPLAMAGIMGGANSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM--NSEVK 412 DS RFERGVD L+ LILS+ GG A + + + + P + F+ ++VK Sbjct: 355 DSSQRFERGVDPCLQSKALERATELILSISGGEAGPVIESFDKKFLPGTVSFLFDTTKVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L+G+ +P+ + +LE LG +I E + FEV++PS R D+++ ADLVEEI+R+YG D+ Sbjct: 415 KLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQRE 530 ++++P+ T V+ +S ++ +V +++ E +++SF+ E Q L+ Q+E Sbjct: 475 LQAQPMQ-TSVQAGL-ISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALY--PQKE 530 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 +E+LNPIS+++S MR + PGL+ + N R FE+ V++ D + ++ Sbjct: 531 FMELLNPISSELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCI 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G G WS E R D +D K D S+ + LD + F + Sbjct: 591 AGLLMGEQG----NLNWS----ESARLFDFYDLKGDLQSLFAS-LKLDDVEFIQSSHHAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I + + G+ G HP + D F L + FE+ L+S IP+ + Sbjct: 642 HPGQSAQIVINGKHS-GWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKP---- 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S ++RDL+F+VD+ I A + +I+N + + VFDV+ GK + E Sbjct: 697 ------ISKYPQIRRDLSFLVDRQISAMQIERVIRNTVKEDWLKSFDVFDVYMGKGIPED 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ + +Q T D +I + + I++ + + + +LR Sbjct: 751 KKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLR 792 >gi|291614192|ref|YP_003524349.1| phenylalanyl-tRNA synthetase, subunit beta [Sideroxydans lithotrophicus ES-1] gi|291584304|gb|ADE11962.1| phenylalanyl-tRNA synthetase, beta subunit [Sideroxydans lithotrophicus ES-1] Length = 784 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 267/808 (33%), Positives = 429/808 (53%), Gaps = 41/808 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ SWL+ ++ ++S E++ LT GLEVE++ + A + +V + +++PD D Sbjct: 1 MQFSESWLRTFVNPELSSEELSHLLTMAGLEVEEMTSVAPAFEKVVVGQVKTKDKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G + + +VCGA NV VG+ A G+ +P + + K+RGI S GMM Sbjct: 61 RLNVLTVDVGLAEPLNIVCGAGNVTVGMKAPCALVGAKLP--GIEIKQAKVRGIASFGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+++SA +M L DA VG + ++L+L D +I + LTPNRSDC+ + GIA ++ Sbjct: 119 CSEKELGLAEESAGLMVLSDDAVVGQSIREHLDLDDHLITLKLTPNRSDCLSLNGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWMRQR 237 A L+ I + + + ++K D+ C ++ + GV + P WM QR Sbjct: 179 SALTGAALQTIPQTVFKQTGNQGCKVKVAASDA--CPRYSGRVISGVNAKAMTPAWMVQR 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ GLRSISALVD+TNYV L+ G P H FD +++ + VR A +GE + L+ Q DL Sbjct: 237 LQRCGLRSISALVDVTNYVLLELGQPLHAFDLGKLNGDIEVRFARAGESLKLLNEQTVDL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA D ++AG++GG + DD TTD+ +E A + P I + LG +DS Sbjct: 297 QDDMLVIADDKNPVALAGVMGGADSAVDDATTDIFLESAFFSPGVIVGKSRRLGFSSDSA 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD L LI+ +CGG A + + S V R+ G+ Sbjct: 357 YRFERGVDFAATQLALDRATQLIIDICGGQAGVATEVQGALPARHPVRLRTSRVHRVLGL 416 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + + +IL RLG + D+F V+ PS+R D+ + DL+EE+ R++G + I+ P+ Sbjct: 417 TLKSSEIAQILSRLGMVYQQKDDEFSVTPPSYRFDIAIEEDLIEEVARVHGYENIEPAPI 476 Query: 478 P-----LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 L QVE R L +++ + R E +N++F+ + G + Sbjct: 477 QARMTILPQVEALRPLV-------KLRQTMLLRDYQETINYAFVEADWERDLCGNTAPIA 529 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-QKYMAAGI 591 + NPI++ MS MR+SLL GLL N+ R +FE+ + + Q AG+ Sbjct: 530 LKNPIASQMSVMRSSLLGGLLGGLRTNLSRKQPRVRLFEIGGCFAAEAGSYVQHERLAGL 589 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G + E G R VD +D K+D ++ P SL F++ HPG Sbjct: 590 AYGGAVAEQWG--------VPARDVDFYDVKSDIDALFAP----SSLSFQAAQHPASHPG 637 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 RS I + G+ GE HP + L + FEV L ++ + KV +S Sbjct: 638 RSARILLDGRDI-GWIGELHPQWQQQYDLPQSVVWFEVELAAL-----SQNCVPKVADIS 691 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 PV+RD+A +VD+++ +L+++++ V ++ ++ +FDV++GK + +GKKS+A +V Sbjct: 692 RFPPVRRDIAVLVDENMTVQSLIDVMRAEKVTNVV-ELALFDVYRGKGVEQGKKSLAFRV 750 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKK 797 L+Q + T D++I M R+V + +K Sbjct: 751 LLQDTQKTLTDNEIEENMARLVAALQRK 778 >gi|294636234|ref|ZP_06714647.1| phenylalanyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] gi|291090469|gb|EFE23030.1| phenylalanyl-tRNA synthetase, beta subunit [Edwardsiella tarda ATCC 23685] Length = 795 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 429/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ ++ + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAINSAALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECHQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G L DYL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPLGCDLRDYLKLDDNTIEISVTPNRADCLGILGIARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKGVRNNV-AP 231 L ++ ++ P + P+E+ D + + C + V+G+ P Sbjct: 180 AV-----LNDLPLAVPAQA---PVEVSIDDRFPIEVQAAEACPRYLGRVVRGIDVTAKTP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM ++L+ G+RSI A+VD+TNYV L+ G P H FD +R+ + VR A GE + LD Sbjct: 232 LWMSEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLNRLQGGIVVRMAREGETLTLLD 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L+ D +VIA + ++AGI GG+H+G + T DVL+E A ++P+ I + G Sbjct: 292 GNQATLASDTLVIADHQQPLALAGIFGGEHSGVNGETRDVLLECAYFNPLAITGRARRYG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNS 409 + TD+ +R+ERGVD Q ++ L+L+LCGG A + + Y +P I S Sbjct: 352 LHTDASHRYERGVDPQLQQRAMERATELLLALCGGQAGPVIDVSSDAYLPQPATITLQRS 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ RL G + E L IL+RLG V ++ PSWR D+ + DL+EE+ R+YG Sbjct: 412 KLDRLIGHPISDEQVLAILQRLGCQVNVVEGGWQALAPSWRFDMTIEEDLIEEVARVYGY 471 Query: 470 DQIKSEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + I PL V R L R VK +L R E + +SF+ + L Q Sbjct: 472 NNIPDVPLRADLVMTAHREADLPLKR---VKTLLVDRGYQEAITYSFVDPKVQALLHPQQ 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PIS DMS MR SL GLL A N +R +FE + D Q Sbjct: 529 PALILPSPISVDMSAMRLSLWSGLLGAVVYNQNRQQTRVRLFETGLRFVPDERANLGIRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M AG+ G E G ER + VD +D K D +V+E LD ++F + A Sbjct: 589 DMMLAGVIAGPRNEEHWGM-------ER-QAVDFYDLKGDLEAVLELTGKLDEVQFRAEA 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S + E + G+ G HP + L+ FEV D+ ++ ++ + Sbjct: 641 HDALHPGQSAALYLQGERI-GFIGVVHPELERKLDLNGRTVVFEVRWDA--LADRRIPQA 697 Query: 705 KKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGK 762 +++ S +P +RD+A +V +++PA ++ K V + V +FDV+ GK + EG Sbjct: 698 REI----SRYPANRRDIAVVVAENVPAEEVLAECKKVGANQVVGVNLFDVYCGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLVLQDTTRTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|262165482|ref|ZP_06033219.1| phenylalanyl-tRNA synthetase beta chain [Vibrio mimicus VM223] gi|262025198|gb|EEY43866.1| phenylalanyl-tRNA synthetase beta chain [Vibrio mimicus VM223] Length = 795 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 266/820 (32%), Positives = 422/820 (51%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ ++ +++ +T GLEV+ V + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDVLAVAGVFDGVKVGQVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + +I I ++ + C + VK V P WM Sbjct: 180 -----GVLNRADVTAPAVNAIAATINDTIAIEVKAPAACPRYLGRIVKNVNVQAQTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD E Sbjct: 235 QEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ G+ T Sbjct: 295 AKLNADTLVIADQQKALAIAGVFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS RFERGVD ++ L++ +CGG + + A + KP ++ +++ Sbjct: 355 DSSMRFERGVDYALQHAAMERATELLVEICGGEVAPVVAAESAADLPKPNQVTLRRTKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + I Sbjct: 415 KLLGHAIPDADVVEILERLGMQVATIAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYNNI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 475 PNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPGVD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPISA+MS MR SL+ GLL N R +FE + D Q+ Sbjct: 530 ALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 590 PMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAATKH 641 Query: 646 SWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+ + II EI G G HP + FGL+ FE+ ++I Sbjct: 642 PALHPGQAAAIIVDGKEI--GVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRVI 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKK 763 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGKK Sbjct: 695 PEAAAISKFPANRRDIALVVDGNIASGEIVEACRVAGGELLKDAKLFDVYVGKGVEEGKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 755 SLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQYGAALR 794 >gi|37526555|ref|NP_929899.1| phenylalanyl-tRNA synthetase subunit beta [Photorhabdus luminescens subsp. laumondii TTO1] gi|41018267|sp|Q7N3Q1|SYFB_PHOLL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|36785986|emb|CAE15038.1| phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 795 Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust. Identities = 271/818 (33%), Positives = 434/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL++ ++ +S E + D +T IGLEV+ V+ +V +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSETLSDQITMIGLEVDGVEAVAGQFHGVVVGEVVQCAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRLGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELPIDAP+G L +YL+L D +I++S+TPNR+DC+ + G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPIDAPLGVDLREYLKLDDKVIEISITPNRADCLSIIGVARDV 179 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 A L E I P + P+ + + + C + +K + A P WMR Sbjct: 180 AVANKMPLSEPQIEAVKPTTDAIFPIRV----EATEACPRYLGRVIKNINVKAATPQWMR 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VD+TNYV L+ G P H FD R++ +TVR A EK++ LD E Sbjct: 236 EKLRRGGIRSIDPIVDVTNYVLLELGQPLHAFDLERLNGSITVRMAKQDEKLVLLDGTEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +LS D +VI+ + + ++AGI GG+H+G ++ T ++L+E A + P+ IA + G+ TD Sbjct: 296 NLSTDTLVISDEKQAVAMAGIFGGEHSGVNEETQNILLECAFFAPLAIAGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 + +R+ERGVD Q ++ L++ +CGG A I + + P+ I ++ R Sbjct: 356 ASHRYERGVDPQLQHKAIERTTQLLIDICGGEAGPIIDVTDESQLPQSATITLRREKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G +P E IL LG V + + ++ PSWR DVE + DLVEE+ RIYG + I Sbjct: 416 LIGHYIPDEQVGDILTHLGCKVTIQENCWQAVAPSWRFDVEIEEDLVEEVARIYGYNNIP 475 Query: 474 SEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 P+ + K +LSLQ+ VK VL R E + +SF+ + L Q+ Sbjct: 476 DVPIRADLIMKKHRETDLSLQR-----VKTVLVDRGYQEAITYSFVDPKIQALLHPQQQA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + NPISADMS MR SLL GLL N +R +FE + V + + +G Q+ Sbjct: 531 LMLPNPISADMSAMRLSLLTGLLTTVVYNQNRQQNRVRLFETGLRFVPDENADQGIRQEL 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M G+ G+ E WS + + VD FD K D +V+E L + F + Sbjct: 591 MLGGVITGNRFEEH----WSLEKQS----VDFFDMKGDLEAVLELTGKLSKISFRADVNP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I E + GY G HP + L+ FEV + ++ + K+ Sbjct: 643 ALHPGQSAGIYLENEYI-GYIGVVHPELERKLDLNGRTVVFEVLWNK--LASRVVPDAKE 699 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 + S +RD+A +V +++ ++ K V I + +FDV+ GK + EG KS+ Sbjct: 700 ISRFPS---NRRDIAIVVPENVAVEDVLAECKKVGVNHIVGINLFDVYCGKGVAEGHKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI ++Q T +++I +++ V + ++ A LR Sbjct: 757 AISFILQDTARTLEEEEIAATINKCVAVLKQRFQASLR 794 >gi|253998434|ref|YP_003050497.1| phenylalanyl-tRNA synthetase subunit beta [Methylovorus sp. SIP3-4] gi|253985113|gb|ACT49970.1| phenylalanyl-tRNA synthetase, beta subunit [Methylovorus sp. SIP3-4] Length = 784 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 270/818 (33%), Positives = 436/818 (53%), Gaps = 48/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ +++ +S E++ LT GLEVE +D A S + +VL+ E++PD D Sbjct: 1 MQFSEIWLRQYVNPAISSEQLGHALTMAGLEVEAMDAVAPAFSHVVVAEVLTAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G +Q+VCGA N RVGL A G+ +P N + K+RG+ES GMM Sbjct: 61 RLQVLTVDVGSGTPLQIVCGASNARVGLKAPCAMVGAALPGFN--IKQAKVRGVESFGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L+++S+ ++ELP +A G + DYL+L+D + + LTPNRSDC+ + GIA D+ Sbjct: 119 CSAKELGLAEESSGLLELPAEAVTGTDIRDYLQLNDQLFTLKLTPNRSDCLSIVGIARDV 178 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 A L+ I+ P++S + + ++ + C + ++GV VA P WM+ Sbjct: 179 AAITGAALQVPAIDQITPVASTGVKIAVR----EPEACPYYNGRSIRGVNAAVATPAWMQ 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+RSISA+VDITNYV L+ G P H FDA+++ + VR A GE + L+ Q+ Sbjct: 235 RRLERSGIRSISAIVDITNYVLLESGQPLHAFDAAKLQGDMEVRYAKQGEALALLNQQQA 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA ++AGI+GG + T D+ +E A + P IA + LG+ TD Sbjct: 295 TLQQDMLVIADAQGPLALAGIMGGLDSAVSLETRDIFLESAYFAPGVIAGKARRLGLSTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S YRFERGVD L+ +LIL +CGG D+ ++ RK V + E + LS Sbjct: 355 SSYRFERGVDFGSTRQALERATALILEICGGEPGDVVEVKS-ALPTRKPVTLRYE-RLLS 412 Query: 416 GIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + +P+E S I RLGF ++E++ PS+R D+E + DL+EE+ R++G + I Sbjct: 413 VLGIPLERSEVSAIFARLGFEAHELDGRYEITPPSYRFDIEIEEDLIEEVARLHGYEHIP 472 Query: 474 S-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P + L ++ +V+ L + E+V++SF+ G + Sbjct: 473 AIAPQATLAMLPASGNELNRA---WVRDALVAGGYQEIVSYSFVDASWERDLLGNNDAIV 529 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEGQKYMAAGI 591 + NPI+++MS MR+ L GLL+ N++R +FE+ Y D+ + +G+ Sbjct: 530 LKNPIASNMSVMRSGLWGGLLQTLVYNLNRKQPRAKLFEIGSAYHKADSGYAETMRVSGL 589 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESGAPSWYH 649 G++ + ++ E R VD +D KA DAL+ +++ H Sbjct: 590 AYGAA--------YPEQWAEDERDVDFYDVKAQVDALTHGRAV-------YQAATHPALH 634 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S I +++ G+ G+ HP + L FE L + Q R + Sbjct: 635 PGQSAHILLDGKVI-GWLGKLHPKWQQHYQLPRSTVVFECDLAPLLTVQLPRYQ-----E 688 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNII---KNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 ++ PV+RD+A +VD+ P L++ + KNV LI D+ +FD+++GK + E KKS+A Sbjct: 689 VAKFPPVRRDIAVVVDEATPVQALLDTMNDAKNV--LISDIALFDIYRGKGVPENKKSLA 746 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VL+Q + T D + +M ++ + K A LR+ Sbjct: 747 FLVLMQDTQKTLTDAEADAVMSNLLALLKTKHGAELRN 784 >gi|301157875|emb|CBW17369.1| Phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|323129609|gb|ADX17039.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] Length = 795 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 432/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMETHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|223041462|ref|ZP_03611665.1| phenylalanyl-tRNA synthetase beta chain [Actinobacillus minor 202] gi|223017720|gb|EEF16127.1| phenylalanyl-tRNA synthetase beta chain [Actinobacillus minor 202] Length = 795 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/822 (33%), Positives = 436/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ +S E++CD +T +GLEV+ VD S I +V+S E++PD D Sbjct: 1 MKFNESWLREWVNPAISTEQLCDQITMLGLEVDSVDPVAGEFSGVVIGEVVSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRAGLKVACAIEGALLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP+DAPVG +YL L+D I++SLTPNR+DC+ +RGIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPLDAPVGVDFREYLNLNDVAIEISLTPNRADCLSIRGIAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + + +S P + +I ++ +L C + VK V N +P W+ Sbjct: 180 -----GVINQAEVSAPEVTAVTATILDKVAVELQAPEACPRYLSRVVKNVNVNAQSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDA++I V+ VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGVIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA ++AGI GG+ +G T DV++E A + P+ I + G+ T Sbjct: 295 AKLQVNTLVIADQKGALAMAGIFGGEASGVSKETKDVVLEAAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+ +RFERGVD + ++ +L+L +CGG A +I A + + P++ K Sbjct: 355 DASHRFERGVDPELTRQAMERATALLLEICGGEAGEIVEAVSEAHLPKRNTVSLRRSKLD 414 Query: 415 SGIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + I IED+ IL RLG +V D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGYHIEDATVTDILTRLGLNVTFANDTWTAVAPSWRFDIEIEEDLIEEVARIYGYNNI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R V+ EVV +SF+ + L Q L Sbjct: 475 PNNSPLSHLTMKGTPEKLLEIAR---VRAAFVDSDYQEVVTYSFVDPKIQTLLHPEQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL+ N +R I E + D +G+ Sbjct: 532 MLPNPISSEMSAMRVSLLTGLLETIVYNQNRQQNRVRIVETGLRFIPDA-----NAESGV 586 Query: 592 RKGS---SGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ S + I G R W K+E VD FD K D + + L+F + Sbjct: 587 RQESVIGAAIVGDKRPVHWEHKAES----VDFFDLKGDIERIFSLTAVRNDLKFVAKTFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+++ G+ EV +I PI K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGTLHPSLVQKLGIKGKPIVCEVLASAIAERPIPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S RD+A +VD+++ AG +++ ++ D+L+ V++FDV++G +L EG Sbjct: 699 -----EISKFPANNRDIAVVVDENVAAGEVLDACRSSGGDKLV-GVSLFDVYRGTNLAEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T +D+I ++ ++ ++ ++ NA LR Sbjct: 753 KKSLAISLTVQDTEKTLEEDEINAVIQAVLADLSQRFNATLR 794 >gi|91776350|ref|YP_546106.1| phenylalanyl-tRNA synthetase beta subunit [Methylobacillus flagellatus KT] gi|91710337|gb|ABE50265.1| phenylalanyl-tRNA synthetase beta subunit [Methylobacillus flagellatus KT] Length = 784 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 262/811 (32%), Positives = 440/811 (54%), Gaps = 34/811 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ ++D + + + LT GLEVE ++ A S + +++S E++PD D Sbjct: 1 MQFSEHWLRQYVDPALDSQGLSHALTMAGLEVEALEPVAPAFSKVVVAEIISAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN R GL A G+ +P + K+RG+ S+GMM Sbjct: 61 RLQVCKVDVGAVEPLQIVCGAPNARAGLRAPCALVGAELP--GFKIKQAKVRGVASSGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L++ S ++EL DA VG + + +L D + + LTPNR+DC+ + GIA D Sbjct: 119 CSAKELGLAEGSDGLLELGADAHVGQDIRELFDLDDQLFTLKLTPNRADCLSITGIARD- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 VAA G E+ + P+ E ++ + + + C +A ++GV A P WM +R Sbjct: 178 VAALTGAPLELPMVDPVPVEHA-RQLAVSVSEPAACPRYAGRLIEGVDAAAATPEWMVRR 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSISA+VDITNYV L++G P H FDA ++ + VR A SGE +L L+ Q+ L Sbjct: 237 LERSGIRSISAIVDITNYVLLEQGQPLHAFDADKLQGGIQVRYARSGEDLLLLNGQQVTL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA D ++AGI+GG+ + D T ++ +E A + P I + L TDS Sbjct: 297 SDDMLVIADDQGPLALAGIMGGEASAVGDTTRNIFLESAFFAPAVIVGKARRLNFSTDSS 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD + L+ L+L +CGG A + + + + + + + + GI Sbjct: 357 YRFERGVDFGNTLIALERASQLVLEICGGQAGPVTEVLHPLPERQPVRLRLARLNSVLGI 416 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + +LERL F FEV+ PS+R D+E + DL+EE+ R++G D I + Sbjct: 417 ALDATVIGALLERLNFKFAAMDGGFEVTPPSYRFDIEIEEDLIEEVARLHGYDHIPA--- 473 Query: 478 PLTQVEDKRNLSLQQSRTR--YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 L +++ L + +S+ +++ LA+ E+V++SF+ + F G + + N Sbjct: 474 -LAPHDEQHMLPVPESKRHRNWLRDTLAASGYQEIVSYSFVDESWERDFLGNANPIGLKN 532 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGIRKG 594 PI++++S MRTSL GL+++ N++R +FE+ Y D+ + +G+ G Sbjct: 533 PIASNLSVMRTSLWAGLMESLIYNLNRKQERVRLFEIGSAYFAEDSAYREIGRISGLAYG 592 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 S+ E W+ ++ E VD FD KA+ ++ +++ + HPG++ Sbjct: 593 SAKPEQ----WASEARE----VDFFDVKAEVDR-----LAGGRVQYVAAQHPALHPGQTA 639 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 I + + G+ G+ HP + L FE LD P+ + V + Sbjct: 640 QILLQGQPI-GWIGKLHPKWQQHYQLPRGAVLFE--LDVEPLLH---AQVPSYVQVGKFP 693 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PV+RD+A +VD+ P +L++ +++ + LI+D+ +FDV+QGK + EGKKS+A VL+Q Sbjct: 694 PVRRDIAVLVDEATPIQSLLDTMRSSKNALINDIALFDVYQGKGVPEGKKSLAFLVLMQD 753 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D + +M +++ +V++ A LR+ Sbjct: 754 TQKTLTDAEADAVMAELLDLLVQRHGAALRN 784 >gi|307611587|emb|CBX01269.1| phenylalanyl-tRNA synthetase, beta subunit [Legionella pneumophila 130b] Length = 793 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 264/822 (32%), Positives = 446/822 (54%), Gaps = 49/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ ++ +++ + LT GLEV+ V+ IV +VL+ + +PD D Sbjct: 1 MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ K + +++VCGA NVR GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLP-GGLQIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ S IMEL +AP+G L +YL L D + D+ LTPNR+DC + G+A ++ Sbjct: 120 CSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVAPNWM 234 A L KL I +I ++ +L S C + C + +RN P WM Sbjct: 180 --AVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRY---CGRIIRNLNLEAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R++ +VD+ NYV L+ G P H FD S+I+ + VR + SGE++ LD QE Sbjct: 235 AERLRRGGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + ++AGI+GG ++ + T V +E A ++P+ IA + G+ + Sbjct: 295 VVLNDNVLVIADKEKPLAMAGIMGGANSAVQEQTQHVFLESAYFNPVTIAGVARKYGLFS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM--NSEVK 412 DS RFERGVD L+ LILS+ GG + + + + P + F+ ++VK Sbjct: 355 DSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L+G+ +P+ + +LE LG +I E + FEV++PS R D+++ ADLVEEI+R+YG D+ Sbjct: 415 KLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQRE 530 ++++P+ T V+ +S ++ +V +++ E +++SF+ E Q L+ Q+E Sbjct: 475 LQAQPMQ-TSVQAGL-ISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALY--PQKE 530 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 +E+LNPIS+++S MR + PGL+ + N R FE+ V++ D + ++ Sbjct: 531 FMELLNPISSELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCI 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G G WS E R D +D K D S+ + LD + F + Sbjct: 591 AGLLMGEQG----NLNWS----ESARLFDFYDLKGDLQSLFAS-LKLDDVEFIQSSHHAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I + + G+ G HP + D F L + FE+ L+S IP+ + Sbjct: 642 HPGQSAQIVINGKHS-GWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKP---- 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S ++RDL+F+VD+ I A + +I+N + + VFDV+ GK + E Sbjct: 697 ------ISKYPQIRRDLSFLVDRQISAMQIERVIRNTVKEDWLKSFDVFDVYMGKGIPED 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ + +Q T D +I + + I++ + + + +LR Sbjct: 751 KKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLR 792 >gi|148826993|ref|YP_001291746.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittGG] gi|148718235|gb|ABQ99362.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittGG] Length = 795 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 261/819 (31%), Positives = 439/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAANCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 IAKLQSNTLLIADQNGALAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + E I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETESVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L + Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHKEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|165976024|ref|YP_001651617.1| phenylalanyl-tRNA synthetase subunit beta [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876125|gb|ABY69173.1| phenylalanyl-tRNA synthetase, beta subunit [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 795 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 432/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ A S + +V+ ++ D D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDAAPVAGAFSGVVVGEVVECAQHSDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|148548428|ref|YP_001268530.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas putida F1] gi|148512486|gb|ABQ79346.1| phenylalanyl-tRNA synthetase beta subunit [Pseudomonas putida F1] Length = 793 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 257/824 (31%), Positives = 436/824 (52%), Gaps = 53/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ +G+ + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSSGQ-ETFQVVCGAPNARPGIKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 119 CSAAELQISEENDGLLELAADAPVGEDIRTYLSLDDASIEIGLTPNRGDCLSIAGLARDV 178 Query: 179 VAAGLGKLKEINISCPL-------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A L + ++ P+ E P+E+ + C + ++ V + Sbjct: 179 SA-----LYDTPVTRPVVPAVAAAHDEVRPVEVSA----PAACPRYLGRVIRNVDLSKPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKN 349 D QE L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI++A ++ Sbjct: 290 DGQEVALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARS 349 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFM 407 G+ TD+ +R+ERGVD Q ++ L+L + GG A + A + + P+ + Sbjct: 350 YGLHTDASHRYERGVDSQLAREAMERATQLLLDIVGGEAGPVVEAVSEQHLPQVAPVTLR 409 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRI 466 + ++ G+++ ++L L + + + ++ V+VPS R D+ + DL+EE+ R+ Sbjct: 410 AERITQMLGMEMDPAQVEQLLNALELTTVKSAEGQWTVTVPSHRFDISLEVDLIEELARL 469 Query: 467 YGVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 YG + + ++ P + E + +L ++R+L +R E + +SFI + Sbjct: 470 YGYNNLPVRYPQARLAPQGKPETRGDLP-------TLRRLLVARGYQEAITYSFIDPKLF 522 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 LF G L + NPIS+DM+ MR SL PGL+KA N++R +FE + Sbjct: 523 ELFSPGVEPLLLANPISSDMAAMRASLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQLG 582 Query: 582 E-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W++ + VD FD KAD +++ +L F Sbjct: 583 DLQQQPMIAGVITGSRLPEG----WANGRDG----VDFFDVKADVEALLGYSGALSDFTF 634 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +G HPG++ I+ ++V GY G HP + GL P+ FE+ L + Sbjct: 635 SAGKHPALHPGQTAAIERDGKLV-GYLGAIHPELAKALGLDRPVFLFELVLGDV-----V 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS +RDLA I + + + ++ +I+ N + D+ +FDV+QGK + Sbjct: 689 EGRLPKFSELSKFPETRRDLALIAGRDVASSAVLELIRDNAGEWLTDLRLFDVYQGKGID 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ + I+ ++ ++ N LR Sbjct: 749 PDRKSLAVGLTWQHPSRTLNDDEVNTTLQNILTSLEQRLNTTLR 792 >gi|288940720|ref|YP_003442960.1| phenylalanyl-tRNA synthetase subunit beta [Allochromatium vinosum DSM 180] gi|288896092|gb|ADC61928.1| phenylalanyl-tRNA synthetase, beta subunit [Allochromatium vinosum DSM 180] Length = 792 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 276/823 (33%), Positives = 435/823 (52%), Gaps = 52/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F+ +WL++ ++ V +++ D L+ GLEV+ V+ S I VLSVE +PD Sbjct: 1 MRFSEAWLREWVNPPVDTQRLADQLSMAGLEVDAVEPAAPVFSGVKIGHVLSVEPHPD-- 58 Query: 60 CAILRI---DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 A LR+ D G+ +Q++CGA NV + A G+C+P + + K+RG+ES G Sbjct: 59 AAKLRVCSVDVGEDAPLQIICGAANVAADMKVPVATIGACLP-GDFKIKRAKLRGVESFG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL L++ S I+ LP DAP+G +L L D I+V LTP+R DC+G+ G+A Sbjct: 118 MICSASELGLAESSDGILPLPADAPLGEDFRAWLALDDQCIEVDLTPDRGDCLGLAGLAR 177 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNW 233 ++ L I P S E P++ L C + ++G+ + P W Sbjct: 178 EVAVINRVPLTPAAIKPVAPTSDERFPVQ----LLAPEACPRYVCRVIRGIDPSATTPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 MR+RL+ G+R+IS +VD+TNYV L+ G P H FD S+++ + VR A GE + L+ + Sbjct: 234 MRERLRRGGIRAISPVVDVTNYVLLELGQPMHGFDLSKLAGEIRVRMASEGETLALLNGE 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L D +VIA R ++AGI+GG +G D T D+L+E A + P+ ++ ++ G+ Sbjct: 294 QATLRADTLVIADAERPVALAGIMGGAESGVGDETRDILLESAFFAPLAVSGKARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-VFMNSE-V 411 TDS +RFERGVD + + ++ L+L + GG +C + PR + + +E V Sbjct: 354 TDSSHRFERGVDPELQVRAIERATRLLLDIVGGQPGPVCEVSAAEHLPRPTPLHLRAERV 413 Query: 412 KRLSGIDVP---IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 R+ G+ +P IED ILERLG +V D ++V+ PS R D+ ++ DL+ +I RI+G Sbjct: 414 ARILGLQLPNATIED---ILERLGMAVERCDDGWQVTPPSARFDLVQEVDLIADIGRIHG 470 Query: 469 VDQI---KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D I + TQ + + L ++R L R EV+ +SF+S E L Sbjct: 471 YDLIPISHASSASATQSDSETRFELDRARL-----ALVDRGFQEVITYSFVSPEIQELVE 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 G L++ NPISA++S MRTSL PGLL+ N R + IFE S + PEG Sbjct: 526 PGIETLKLANPISAELSVMRTSLWPGLLQTAVYNQARQMERVRIFE-SGLRFRFGPEGLT 584 Query: 586 YMAAGIRKGSSGIEGSGRL---WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G +G+ RL WS K + VD FD KAD +++ + S RF Sbjct: 585 QT-----PGIAGLVVGDRLPEQWSQKGQG----VDFFDLKADVEALLTQTGASASFRFVP 635 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG++ I+ V G G HP + L+ + FE LD P++ Sbjct: 636 AEHPALHPGQTARIERDGRTV-GLIGMLHPALAARLDLTGDLFLFE--LDLAPLTPGVLP 692 Query: 703 KTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGE 760 + K+ S +P ++RDLA +VDQ + + I++ L+ D+ +FDV+ G+++ Sbjct: 693 RYAKI----SRYPGIRRDLAILVDQGVSYEAVEQCIRSAASDLLRDLILFDVYTGQNIET 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+A+ +++Q T D+ I + RI+E + + +A LR Sbjct: 749 GRKSLALGLILQSSSQTLTDEIIDATVGRILERLTAELDARLR 791 >gi|145633213|ref|ZP_01788944.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 3655] gi|144986059|gb|EDJ92649.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 3655] Length = 795 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 438/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKMACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRLAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDVSHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETVSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLANLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|326795747|ref|YP_004313567.1| Phenylalanyl-tRNA synthetase beta chain [Marinomonas mediterranea MMB-1] gi|326546511|gb|ADZ91731.1| Phenylalanyl-tRNA synthetase beta chain [Marinomonas mediterranea MMB-1] Length = 794 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 268/823 (32%), Positives = 438/823 (53%), Gaps = 50/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ ++ ++S +++ +T GLEV++V+ + S + ++L+ E++P+ D Sbjct: 1 MKFSENWLREWVNPEISTDELVAQVTMAGLEVDEVEPVASDFSGVVVGEILAAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ G +E QVVCGAPN R G+ +A G+ + + I K+R +ES GM+ Sbjct: 61 KLQVCRVSDGS-EEFQVVCGAPNARAGIKIPFAKVGAVLGADFKIKKA-KLRQVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ +EL +SDD+ ++EL DAP G + +YL L+D IIDV LTPNRSDC+ + G+A ++ Sbjct: 119 CAAEELGISDDNDGLLELSNDAPTGTDIREYLGLNDAIIDVDLTPNRSDCLSIAGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEI----KFDLDDSSLCKGFAMCCVKGVRNNVA---P 231 G L ++S P+ E +E+ ++ S C + + GV NVA P Sbjct: 179 -----GVLNNTDLS-PVVIEPSNVEVDDTFSVKVEASEACPRYIGRVINGV--NVAVQTP 230 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM ++L+ G+R+I +VDITNYV L+ G P H FD + ++ + VR A EKI LD Sbjct: 231 LWMSEKLRRSGIRTIDPIVDITNYVMLELGQPMHAFDLANLNGFVVVRNATQDEKITLLD 290 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE L PD ++IA + R ++AGI+GG+ +G +D+T ++ +E A + PI +A ++ G Sbjct: 291 GQEITLRPDTLIIADEVRPLAMAGIMGGELSGVNDSTQNIFLESAFFAPIALAGKARSYG 350 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNS 409 + TDS +RFERGVD ++ +LI+ + GG + N P+ ++ Sbjct: 351 LHTDSSHRFERGVDATLQQKAIERATALIVEIAGGKVGPLIEVANDADLPKANQVTLRRK 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ + I + IL RLG +I D ++ ++ PS R D+E +ADL+EE+ RIYG Sbjct: 411 KLDQYLAIALEQSQVTEILTRLGMDLISVSDTEWVIAAPSHRFDIEIEADLIEEVARIYG 470 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + S +P V + + ++ ++ + V+ L + E V +SFI S F Sbjct: 471 YDNLPSS-MPTAAV-NFKPVTETKTPIQSVRATLVANGYQEAVTYSFIDPVLSKQFCPDI 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQ 584 + + NPIS+DM MR SL+P L+K N +R +FE + + Q Sbjct: 529 TPVPLENPISSDMGVMRPSLVPSLVKTYLYNQNRQQTRVRLFEAGRRFIGSVDKLAELDQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR---FE 641 + AG+ GS EG W +E VD +D KA +E L+ + FE Sbjct: 589 QERIAGLIAGSCSPEG----WYHNNES----VDFYDIKAH----VEALFELNQGQVPAFE 636 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGRS + + V G GE HP G++ + F++ LD++ +Q + Sbjct: 637 RADVVYLHPGRSAKVLIDGKEV-GVLGELHPQFAKDLGINQAVYIFDLELDAVLSAQLPQ 695 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGE 760 +S V+RDLA +VD+ IP L +I+ + V VFDV+QG+ + E Sbjct: 696 YSA-----VSKFPEVRRDLALVVDRQIPVSALESIVAQYAGEAFQKVAVFDVYQGQGIDE 750 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVA+ + Q T D+++ +D+IV + ++ AV+R Sbjct: 751 SKKSVALGLTWQHPSHTLSDEEVNKTVDQIVSALAEELGAVIR 793 >gi|54295551|ref|YP_127966.1| phenylalanyl-tRNA synthetase, beta subunit [Legionella pneumophila str. Lens] gi|66773879|sp|Q5WT87|SYFB_LEGPL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|53755383|emb|CAH16879.1| Phenylalanyl-tRNA synthetase, beta subunit [Legionella pneumophila str. Lens] Length = 793 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/822 (31%), Positives = 446/822 (54%), Gaps = 49/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ ++ +++ + LT GLEV+ V+ IV +VL+ + +PD D Sbjct: 1 MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ K + +++VCGA NVR GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLP-GGLQIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ S IMEL +AP+G L +YL L D + D+ LTPNR+DC + G+A ++ Sbjct: 120 CSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVAPNWM 234 A L KL I +I ++ +L S C + C + +RN P WM Sbjct: 180 --AVLNKLPLIEQPIVTVPPAIDDGLRVNLIHSEACPRY---CGRIIRNLNLEAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R++ +VD+ NYV L+ G P H FD S+I+ + VR + SGE++ LD QE Sbjct: 235 AERLRRGGIRTLHPVVDVMNYVMLELGQPMHAFDLSKINGEINVRYSASGEQLELLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + ++AGI+GG ++ + T + +E A ++P+ IA + G+ + Sbjct: 295 VVLNDNVLVIADKEKPLAMAGIMGGANSAVQEQTQHIFLESAYFNPVTIAGVARKYGLFS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM--NSEVK 412 DS RFERGVD L+ LILS+ GG + + + + P + F+ ++VK Sbjct: 355 DSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L+G+ +P+ + +LE LG +I E + FEV++PS R D+++ ADLVEEI+R+YG D+ Sbjct: 415 KLTGLSIPLNEMKNLLEGLGVVIIKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQRE 530 ++++P+ T V+ +S ++ +V +++ E +++SF+ E Q L+ Q+E Sbjct: 475 LQAQPMQ-TSVQAGL-ISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALY--PQKE 530 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 +E+LNPIS+++S MR + PGL+ + N R FE+ V++ D + ++ Sbjct: 531 FMELLNPISSELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCI 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G G WS E R D +D K D S+ + LD + F + Sbjct: 591 AGLLMGEQG----NLNWS----ESARLFDFYDLKGDLQSLFAS-LKLDDVEFIQSSHHAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I + + G+ G HP + D F L + FE+ L+S IP+ + Sbjct: 642 HPGQSAQIVINGKHS-GWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKP---- 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S ++RDL+F+VD+ I A + +I+N + + VFDV+ GK + E Sbjct: 697 ------ISKYPQIRRDLSFLVDRQISAMQIERVIRNTVKEDWLKSFDVFDVYMGKGIPED 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ + +Q T D +I + + I++ + + + +LR Sbjct: 751 KKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLR 792 >gi|28898065|ref|NP_797670.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus RIMD 2210633] gi|260366367|ref|ZP_05778806.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] gi|260878415|ref|ZP_05890770.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|260896994|ref|ZP_05905490.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|31340444|sp|Q87Q59|SYFB_VIBPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28806279|dbj|BAC59554.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio parahaemolyticus RIMD 2210633] gi|308087670|gb|EFO37365.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus Peru-466] gi|308091042|gb|EFO40737.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AN-5034] gi|308113205|gb|EFO50745.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus K5030] Length = 801 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 272/825 (32%), Positives = 421/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAPSIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQNPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +V+E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAVLELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGAALR 800 >gi|16273224|ref|NP_439463.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae Rd KW20] gi|260581341|ref|ZP_05849157.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae RdAW] gi|1174508|sp|P43820|SYFB_HAEIN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1574770|gb|AAC22958.1| phenylalanyl-tRNA synthetase, beta subunit (pheT) [Haemophilus influenzae Rd KW20] gi|260092008|gb|EEW75955.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae RdAW] Length = 795 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 259/815 (31%), Positives = 433/815 (53%), Gaps = 33/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVEAVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 + +++ + +I +++ DL C + + +K V +P WM+++ Sbjct: 180 GVVNKQLVNQLHFEA--APATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD L Sbjct: 238 LRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGSTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ TD+ Sbjct: 298 QSNTLLIADQNGPLAMAGIFGGAASGVNSETKDVILESAFFAPLAIAGRARQYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ L Sbjct: 358 HRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKLDALL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KS 474 G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + I + Sbjct: 418 GHHIETGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNSIPNN 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PL + + + L +R +K L E + +SF+ + L Q L + Sbjct: 478 APLAHLCMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEALVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAG 590 NPIS +MS MR SL+ GLL A N +R + +FE + D Q+++ + Sbjct: 535 NPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEFVLSA 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G++ E W+ K+E VD FD K D SV+ +RF + HP Sbjct: 595 VITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGHRVRFVAKQFDALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I+ + + G+ G HP+I GL+ FE+ ++I + K + Sbjct: 647 GQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS+AI Sbjct: 701 SKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKSLAIS 759 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 760 LTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|260901792|ref|ZP_05910187.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] gi|308108101|gb|EFO45641.1| phenylalanine--tRNA ligase, beta subunit [Vibrio parahaemolyticus AQ4037] Length = 801 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 271/825 (32%), Positives = 421/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAASIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQNPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDETVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGAALR 800 >gi|229525827|ref|ZP_04415232.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] gi|229339408|gb|EEO04425.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae bv. albensis VL426] Length = 795 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 267/821 (32%), Positives = 422/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIEVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPIS +MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISVEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGK-AIGVTGTVHPELERKFGLNGRTIVFEIEWNAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGK Sbjct: 694 IPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 754 KSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQFGAALR 794 >gi|301170050|emb|CBW29654.1| phenylalanine tRNA synthetase, beta subunit [Haemophilus influenzae 10810] Length = 795 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 261/819 (31%), Positives = 438/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAANCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSISGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 IAKLQSNTLLIADQNGALAMAGIFGGAASGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + E I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETESVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D S + + +RF + Sbjct: 591 VLSAVITGAAKSEH----WAGKAES----VDFFDLKGDLESALSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISVVLAEVKQRFNAELR 794 >gi|220934627|ref|YP_002513526.1| phenylalanyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. HL-EbGR7] gi|219995937|gb|ACL72539.1| phenylalanyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. HL-EbGR7] Length = 789 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 267/820 (32%), Positives = 433/820 (52%), Gaps = 47/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + WL + +D +S E++ LT GLE++ ++ S + VL VE +PD D Sbjct: 1 MRISNQWLLEWVDHGLSPEELGHRLTMAGLELDALEAAAGEFSGVVVGHVLQVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G +QVVCGAPNV G+ +A G+ +P + K+RG+ES GM+ Sbjct: 61 KLRVCQVEDGSGSPVQVVCGAPNVVEGMKVPFARVGAVLP-GEFKIKKAKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L++ S +M LP+D G + + L L D I++V LTPNR+DC+ + GIA + Sbjct: 120 CSARELGLAETSEGLMPLPLDLAAGADVREALGLDDTILEVDLTPNRADCLCMAGIARE- 178 Query: 179 VAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 VAA GK + EI+ E P+ I+ D C + V+GV P WM Sbjct: 179 VAALTGKPLCMPEISPVGADVDERFPVSIEAGAD----CPVYHGRVVRGVNPGAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RS+ LVD+TNYV L+ G P H FD + + + VRRA GE++ LD QE Sbjct: 235 REKLRRAGIRSLGPLVDVTNYVMLELGQPMHAFDLAWLEGGIVVRRARKGERLTLLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS ++VIA ++ ++AGI+GG+ +G + T DV +E A + P+ IA ++ G+ T Sbjct: 295 IRLSEADLVIADHAKVLALAGIMGGEASGVGEETRDVFLESAHFAPMAIAGRARHHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFMNSEVKR 413 DS +RFERGVD L+ +L+ + GG + A +P I+ S + R Sbjct: 355 DSSHRFERGVDPALPSRALQRATALLCQIAGGQPGPVVEALGARVEEPAPIMLRASRIVR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + G + + R+L+ LG V + V+ PS+R D+ + DL+EE+ R++G D++ Sbjct: 415 VLGARIDESEVTRLLKALGCQVEPMAGAWRVTPPSFRFDLSIEVDLIEEVARVHGYDRLP 474 Query: 474 SEPLPLT----QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 +E PL+ V++ R L SR R+ ++A E + +SF+ + LF R Sbjct: 475 AEVPPLSPELGAVDEAR---LPLSRIRH---LMADLGYQEAITYSFVDPQLEALFSPDSR 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQKYM 587 L + NPIS++++ MR+SL PGL+KA N++R +FE +S V + D + Q M Sbjct: 529 PLALANPISSELAVMRSSLWPGLVKALKYNLNRQQERVRLFETGLSFVSQGDDLK-QHPM 587 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAP 645 A + G+ W + E R +D FD K D +E +SL + F S Sbjct: 588 IAAVATGAR--------WPLQWAEPSRAMDFFDLKGD----VESLLSLAGGDVSFASAVH 635 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S + + G+ G HP+++ L + E+ LD I ++ Sbjct: 636 PALHPGQSARVLLGG-VPCGWLGALHPSLISRLDLDQDVYVMELSLDGI-----RQGSVP 689 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 K S ++RDLA +VD+ P + I+++ + +V VFDV+ GK + +G+KS Sbjct: 690 KFTEQSRFPAIRRDLAVVVDRDCPVSRIEAAIRDLGISALREVVVFDVYTGKGVPDGRKS 749 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +A+ +++Q L T D ++ +M IV+ + + A LR+ Sbjct: 750 LALGLILQELSRTLTDQEVDAVMQGIVKKLEQDVGATLRA 789 >gi|311279401|ref|YP_003941632.1| phenylalanyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] gi|308748596|gb|ADO48348.1| phenylalanyl-tRNA synthetase, beta subunit [Enterobacter cloacae SCF1] Length = 795 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/814 (32%), Positives = 429/814 (52%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSGQVTMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++TG + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNTGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L ++ ++ S L I+ + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQQPLTAPEMAPVAATISDTLPIQVEAADA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 KADTLVIADHKKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ LCGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDLCGGEAGPVIDVTHEDSLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADAQVSDILRRLGCEVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ + + R +L R VK +L + EV+ +SF+ + L G+ L + Sbjct: 478 PVQAGLIMGNHREANLPLKR---VKTMLNDKGYQEVITYSFVDPKVQQLIHPGEEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMAAG 590 +PIS++MS MR SL GLL N +R + IFE + DT P G Q M G Sbjct: 535 SPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFETGLRFVPDTQAPLGIRQDLMLGG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ E W+ E VD +D K D SV++ L ++F++ A HP Sbjct: 595 VICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLADVQFKAEANPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I E + G+ G HP + L+ FE+ +++ + K + Sbjct: 647 GQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELQWNALADRVVPQAK-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V I V +FDV++GK + +G KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAADILAECKKVGVNQIVGVNLFDVYRGKGVADGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I ++ VE + ++ A LR Sbjct: 761 ILQDTSRTLEEEEIAATVNTCVEALKERFQASLR 794 >gi|56413675|ref|YP_150750.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197362599|ref|YP_002142236.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|66773857|sp|Q5PH85|SYFB_SALPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56127932|gb|AAV77438.1| phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197094076|emb|CAR59576.1| phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 795 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 432/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE++R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVVRVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|258620239|ref|ZP_05715278.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio mimicus VM573] gi|258587597|gb|EEW12307.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio mimicus VM573] Length = 795 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 270/822 (32%), Positives = 423/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIEVKAPTACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ + Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYSL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVATIAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ +P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQ-VPVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYSFAAT 639 Query: 644 APSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+ + II EI G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGKEI--GVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTR 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EG Sbjct: 693 VIPEAAAISKFPANRRDIALVVDGNIASGEIVEACRVAGGELLKDAKLFDVYVGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 753 KKSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQYGAALR 794 >gi|242239478|ref|YP_002987659.1| phenylalanyl-tRNA synthetase subunit beta [Dickeya dadantii Ech703] gi|242131535|gb|ACS85837.1| phenylalanyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech703] Length = 795 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 430/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP+DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPLDAPIGTDIRNYLQLDDNTIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIP-LEIKF--DLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L + +S P+ S P +E +F +D + C + VKG+ N P WM Sbjct: 180 AV-----LNALALSEPVVSPVAPTIEDRFPIQVDATEACPRYLGRVVKGINVNATTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD R+ + VR A GE + LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLEGGIVVRLAQEGEVLRLLDGSD 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD +VIA + ++ GI GG+H+G + T +VL+E A ++P++I + G+ T Sbjct: 295 VSLKPDTLVIADHQKALALGGIFGGEHSGVNGATQNVLLECAYFNPLSITGRARRYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKPRKIVFMNSE-VK 412 D+ +R+ERGVD ++ L+L +CGG A + + T R + + E + Sbjct: 355 DASHRYERGVDPALQHKAIERATCLLLDICGGQAGPVMDVTCESTLPARATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G VP E IL RLG SV + ++ PSWR D++ + DLVEE+ R+YG D I Sbjct: 415 RLIGHVVPDEKVQDILTRLGCSVTKIAEGWQAVAPSWRFDMDIEEDLVEEVARVYGYDNI 474 Query: 473 KS----EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + PL +TQ R L R VK +L R E + +SF+ + L GQ Sbjct: 475 PNIATHAPLKMTQ---HREADLPLKR---VKNMLVDRGFQEAITYSFVDPKIQSLIHPGQ 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + + IS +MS MR SL GLL A N +R + +FE + D Q Sbjct: 529 DALILPSSISVEMSAMRLSLWSGLLGAVVYNQNRQQSRLRLFESGLRFVPDATADLGIRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M AG+ G+ + + + + VD +D K D +V+ L + F + A Sbjct: 589 DTMLAGVITGTR--------YEEHWDLARQSVDFYDLKGDLEAVLSLTGKLSDIEFRAEA 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I A+ +GY G HP + L+ FEV D + Sbjct: 641 NPALHPGQSAGIYL-ADKRIGYLGVIHPELERKLDLNGRTVVFEVLWDKL-----ADRAV 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + EG Sbjct: 695 PEATDVSRFPANRRDIAVVVAENVPAGDVLAECKKVGANQLV-GVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 754 KSLAISLVLQDTSRTLAEEEIAATVAQCVAALKQRFQASLR 794 >gi|157145986|ref|YP_001453305.1| phenylalanyl-tRNA synthetase subunit beta [Citrobacter koseri ATCC BAA-895] gi|157083191|gb|ABV12869.1| hypothetical protein CKO_01740 [Citrobacter koseri ATCC BAA-895] Length = 795 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/816 (32%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + D +T GLEV+ VD + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALSDQITMAGLEVDGVDAVAGEFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPTDAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I+ ++ + L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNKIALVEPEIAPVAATINDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 STDTLVIADHHKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTNDATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + NLSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PIQAGLIMGTHREANLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLLHPGEEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPSPISIEMSAMRLSLWTGLLSTVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F + A Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLADIQFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|313499441|gb|ADR60807.1| PheT [Pseudomonas putida BIRD-1] Length = 793 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 262/826 (31%), Positives = 437/826 (52%), Gaps = 57/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ +G+ + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSSGQ-ETFQVVCGAPNARPGIKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 119 CSAAELQISEENDGLLELAADAPVGEDIRTYLSLDDASIEIGLTPNRGDCLSIAGLARDV 178 Query: 179 VAAGLGKLKEINISCPL-------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A L + ++ P+ E P+E+ + C + ++ V + Sbjct: 179 SA-----LYDTPVTRPVVPAVAAAHDEVRPVEVS----APAACPRYLGRVIRNVDLSKPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKN 349 D QE L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI++A ++ Sbjct: 290 DGQEVALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARS 349 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFM 407 G+ TD+ +R+ERGVD Q ++ L+L + GG A + A + + P+ + Sbjct: 350 YGLHTDASHRYERGVDSQLAREAMERATQLLLDIVGGEAGPVVEAVSEQHLPQVAPVTLR 409 Query: 408 NSEVKRLSGIDV---PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + ++ G+++ +E L LE L + GE ++ V VPS R D+ + DL+EE+ Sbjct: 410 AERITQMLGMEMEPAQVEQLLNALE-LTTTKSGE-GQWTVRVPSHRFDISLEVDLIEELA 467 Query: 465 RIYGVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 R+YG + + ++ P + E + +L ++R+L +R E + +SFI + Sbjct: 468 RLYGYNNLPVRYPQARLAPQGKPETRGDLP-------TLRRLLVARGYQEAITYSFIDPK 520 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 LF G L + NPIS+DM+ MR SL PGL+KA N++R +FE + Sbjct: 521 LFELFSPGVEPLLLANPISSDMAAMRASLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQ 580 Query: 580 TPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + Q+ M AG+ GS EG W++ + VD FD KAD +++ +L Sbjct: 581 LGDLQQQPMIAGVITGSRLPEG----WANGRDG----VDFFDVKADVEALLGYSGALSDF 632 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F +G HPG++ I+ ++V GY G HP + GL P+ FE+ L + Sbjct: 633 TFSAGKHPALHPGQTAAIERGGKLV-GYLGAIHPELAKALGLDRPVFLFELVLGDV---- 687 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + K LS +RDLA I + + + ++ +I+ N + D+ +FDV+QGK Sbjct: 688 -VEGRLPKFSELSKFPETRRDLALIAGREVASSAVLELIRDNAGEWLTDLRLFDVYQGKG 746 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A+ + Q T DD++ + I+ ++ ++ N LR Sbjct: 747 IDPDRKSLAVGLTWQHPSRTLNDDEVNTTLQNILTSLEQRLNTTLR 792 >gi|283833386|ref|ZP_06353127.1| phenylalanyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] gi|291071035|gb|EFE09144.1| phenylalanyl-tRNA synthetase, beta subunit [Citrobacter youngae ATCC 29220] Length = 795 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 433/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALSNQITMAGLEVDGVEPVSGAFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E ++ ++ S L I+ D ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQAPLVEPEMAPVAATISDVLPIQVDAVEA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V +++ PSWR D+E + DLVEE+ R+YG D I + Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQGEWKAVAPSWRFDMEIEEDLVEEVARVYGYDNIPNT 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKIQALLHPGEESLL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS DMS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPSPISVDMSAMRLSLWTGLLSTVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ A Sbjct: 593 AGVICGNRHDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLADIQFKAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + ++ + + ++V Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNK--LADRVVPQAREV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|271500485|ref|YP_003333510.1| phenylalanyl-tRNA synthetase subunit beta [Dickeya dadantii Ech586] gi|270344040|gb|ACZ76805.1| phenylalanyl-tRNA synthetase, beta subunit [Dickeya dadantii Ech586] Length = 795 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 263/821 (32%), Positives = 428/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + + +T GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEPVAGVFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHSGIIELPSDAPLGTDIREYLKLDDHTIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L + ++ P + S +I + ++ S C + VKG+ A P WM Sbjct: 180 AV-----LNAMELTTPTTEPVSATIADQFPIQVEASDACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD +R+ + VR A GE + LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLEGGIVVRMAKEGETLRLLDGTD 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++ GI GG+H+G + T DVL+E A ++P++I + G+ T Sbjct: 295 ATLSADTLVIADHQKALAMGGIFGGEHSGVNGGTQDVLLECAYFNPLSITGRARRYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 D+ +R+ERGVD ++ L+L +CGG A + + P I ++ Sbjct: 355 DASHRYERGVDPALQYQAIERATRLLLDICGGDAGPVVDVSSEKDLPACATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G ++ E IL RLG V D ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 415 RLIGHEISDEKVSDILNRLGCQVTKTADGWQAVAPSWRFDMAIEEDLVEEVARIYGYNNI 474 Query: 473 KS----EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + PL +TQ R SL R VK +L R E + +SF+ + L G+ Sbjct: 475 PNIPTQAPLKMTQ---HREASLTLKR---VKTLLVDRGFQEAITYSFVDPKIQSLIHPGE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PIS +MS MR SL GLL A N +R + +FE + D Q Sbjct: 529 EALILPSPISVEMSAMRLSLWSGLLGAVVYNQNRQQSRLRVFESGLRFVPDQSADLGVRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ G+ + + + + VD +D K D +V+ L ++ F + + Sbjct: 589 ETMLAGVITGTR--------YEEHWDLARQTVDFYDLKGDLEAVLALTGKLSAIEFRAES 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S HPG+S I + E + GY G HP + L+ FEV D + Sbjct: 641 HSALHPGQSAAIYLAGERI-GYIGVVHPELERKLDLNGRTVVFEVLWDKL-----ADRVV 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +V + +PAG ++N K V ++L+ V +FDV++GK + EG Sbjct: 695 PEAADISRFPANRRDIAVVVAESVPAGDVLNECKKVGANQLV-GVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 754 KSLAISLVLQDTARTLAEEEIAATVAQCVAVLKQRFQASLR 794 >gi|16764689|ref|NP_460304.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994354|ref|ZP_02575446.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168233522|ref|ZP_02658580.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168240841|ref|ZP_02665773.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168822197|ref|ZP_02834197.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194449577|ref|YP_002045345.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194469827|ref|ZP_03075811.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197247557|ref|YP_002146699.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197262355|ref|ZP_03162429.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|200390106|ref|ZP_03216717.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|238910846|ref|ZP_04654683.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|17865720|sp|P15434|SYFB_SALTY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|16419857|gb|AAL20263.1| phenylalanine tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194407881|gb|ACF68100.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456191|gb|EDX45030.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|197211260|gb|ACH48657.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197240610|gb|EDY23230.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|199602551|gb|EDZ01097.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205327737|gb|EDZ14501.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332319|gb|EDZ19083.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339386|gb|EDZ26150.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205341293|gb|EDZ28057.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|261246547|emb|CBG24357.1| PheRS [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993219|gb|ACY88104.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|312912323|dbj|BAJ36297.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320086182|emb|CBY95956.1| phenylalanyl-tRNA synthetase, beta subunit [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321223966|gb|EFX49029.1| Phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|332988226|gb|AEF07209.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 795 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 431/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|168239547|ref|ZP_02664605.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194736272|ref|YP_002114355.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194711774|gb|ACF90995.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197287770|gb|EDY27160.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 795 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 431/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLTTVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|319790176|ref|YP_004151809.1| phenylalanyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] gi|317114678|gb|ADU97168.1| phenylalanyl-tRNA synthetase, beta subunit [Thermovibrio ammonificans HB-1] Length = 794 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 277/817 (33%), Positives = 443/817 (54%), Gaps = 36/817 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK T +WLK+ ++ D +S +++ D LT G+EV+ V N E + I ++ + ++P+ Sbjct: 1 MKITYNWLKEFIEIDDLSAKEVADLLTDAGIEVDAVYNPAEEVEKVVIGRITEISKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G +Q+V GA NV G + A G+ +P + + K+RG+ S GM Sbjct: 61 DRLRICQVDVGDTV-LQIVTGADNVYEGAVVPVALHGAKLP-GGVRIKRAKLRGVVSNGM 118 Query: 118 MCSEKELMLSDDSASIMELP--IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 +CS EL L+D + + LP + VG L L+D +I+ +T NR D + V GIA Sbjct: 119 LCSAVELGLTDSAPGVWTLPEELGEKVGEDAVTALGLNDWVIEYEITTNRPDALSVLGIA 178 Query: 176 LDLVAAGLG---KLKEINISC-PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +L A LG KL E SC ++E E + D C + VKG+ N +P Sbjct: 179 RELRAM-LGRPVKLPETGYSCGEFNAEE---EATLKVLDQGACPRYEGFVVKGISNRESP 234 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM+ RL VGLR I+A+VD+TNYV + G P H FD ++S + VRRA GEKI+ L Sbjct: 235 LWMQVRLYLVGLRPINAVVDVTNYVMYELGQPLHAFDLEKLSGREVVVRRAREGEKIVTL 294 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E +LS +++VIA + ++AG++GG +G +T ++ +E A +DP+ + R+ K L Sbjct: 295 DGVERELSGEDLVIADAEKPVAVAGVMGGLESGTTLSTRELFLESAHFDPMTVRRTSKRL 354 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYKPRKIVFMNS 409 G+ TDS YRFERG D++ + + LI L GG + ++ Y P+ IVF Sbjct: 355 GLSTDSSYRFERGADIEACKFAAERALHLIQKLVGGEVAKGSLSFYPKPYTPKVIVFSPE 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYG 468 +L G+++P + IL LGF+V E D V VPSWR+ DV + DL+EE++RIYG Sbjct: 415 RAVKLLGVNIPARKAFEILTGLGFTVKKEADYIVVKVPSWRKYDVTREVDLIEEVVRIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 + ++ S PL E R+ + R + VK L+S E +N+SFI K+ FG Sbjct: 475 MKRVVSS-FPLMHSEVPRDFTFL--RVQEVKEFLSSLGFNEAINYSFIGKKLFEKFGLPV 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 R ++I NP+S + MR L P L+ N++R D +FEV+ + + T E Sbjct: 532 DRLVKIKNPLSEEWVYMRNFLFPSLVNNAVNNINRNERDVFLFEVARTF-SPTEEELPKE 590 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + ++G E LW + R VD +D K A+ + F+ L+ L+FE + Sbjct: 591 ELKVALLATG-ELPENLW------QFREVDFYDIKG-AVEALGEFLGLE-LQFERREFPF 641 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+SG +K + + V G+ G HP++ + F + PI E+ L+ + ++ +T K Sbjct: 642 LHPGQSGAVKLNGKEV-GFLGRLHPDVEERFEVRQPIFVAELNLEE--LLKQSAARTVKF 698 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 + PV RD+A +VD+ P + +I+ R ++ + +FDV++GK + EGKKSVA Sbjct: 699 KPIPKFPPVTRDIAVVVDRSTPVAEIEKVIRESARYLEKLKLFDVYEGKGIPEGKKSVAF 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + + T D+++ +M I+E ++++ A LR+ Sbjct: 759 SLTFRAKEKTLSDEEVNKIMADIIE-ALQRSGATLRA 794 >gi|329895714|ref|ZP_08271118.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] gi|328922190|gb|EGG29545.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium IMCC3088] Length = 789 Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust. Identities = 258/815 (31%), Positives = 433/815 (53%), Gaps = 38/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WLK+ + ++ E + +T GLEV+ ++ A S + +++ +++PD D Sbjct: 1 MKISEQWLKEWVPHTLATEDLAHQITMAGLEVDAIEPVAGAFSSVVVGEIVDAQQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + +Q+VCGAPN RVGL A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCKVNVGEAEPLQIVCGAPNARVGLKAPVALVGAVLP-GDFKIRKSKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+E EL LS+ S +MELP DAPVG L DYL L D I++ LTPNR+DC+ VRGIA ++ Sbjct: 120 CAEAELELSEASDGLMELPEDAPVGTDLRDYLGLDDNSIEIGLTPNRADCLSVRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 +L+E + +S+E+ +I D+ + C +A ++GV N + +P W+++R Sbjct: 180 SVLTGVELQEPTWAS-VSTEA-STQIGVDVVATEACPVYAARVIEGVDNTLESPLWLQER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ GLRS LVD+TN+V L+ G P H FDA +++ + VR A E ++ LD +E L Sbjct: 238 LRRCGLRSKDPLVDVTNFVMLELGQPMHAFDADKLNGPIVVRMAQPQESMMLLDGKEISL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D ++I + AG++GG+ + T V++E A + P +A + G+ TD+ Sbjct: 298 PEDALLITDQAGPIAFAGVMGGQRSAVSSETRAVVLESAFFTPRALAGQARKQGMHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD + L LI+ + GG A + + R+ + P + + + + R Sbjct: 358 HRYERGVDFELAELALDRATQLIVEIAGGHAGPVTMVRSQSDLPDRSDVSLSQASLSRAL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++P + IL LGF V D + SVPSWR D+ +ADLVEE+ R+YG ++ Sbjct: 418 GLEIPKAEVSHILSGLGFGVNETSDGWSCSVPSWRFDISIEADLVEEVARVYGYNK---- 473 Query: 476 PLPLTQVEDKRNLSLQQSRT---RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 LP++++ + ++ + ++R LASR + EV+ +SF+ + + F ++ + Sbjct: 474 -LPVSKIVASLEMPVRPEKAVSPSRIRRYLASRDLREVITYSFVDPKLAAQFADIKQCVT 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS D+S MR SL+P L+ N++R + IFE + QK A + Sbjct: 533 LKNPISEDLSVMRPSLVPSLVATAITNINRQQSRVRIFEQGLTFTAGEGYPQKAKVAILL 592 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY---H 649 G + +E G R +D +D K + +E ++ +R + P+ + H Sbjct: 593 SGKAELERMGN--------RSGNIDFYDLKGE----VEALLNQLGIRHATYLPAEHQGLH 640 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG++ + IV GY G+ HP GLS + E+ D + + Sbjct: 641 PGQTADVLVDGAIV-GYVGKIHPQTQKILGLSQAVYVAELDRDVL-----SNADIAQFAS 694 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +S V+RDLA +VD + G L K + L +V VFD++QG+ + EG+KSVA+ Sbjct: 695 VSKFPEVRRDLAVVVDAAVKVGDLTASAKAALGMLGKEVFVFDIYQGQGVPEGQKSVAMG 754 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + T D D+ M ++VE++ + A LR Sbjct: 755 LTLGDQSRTLSDSDVNDAMAQVVESLKETYQAELR 789 >gi|62179927|ref|YP_216344.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|75483707|sp|Q57PU8|SYFB_SALCH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|62127560|gb|AAX65263.1| phenylalanine tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714393|gb|EFZ05964.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 795 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 432/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S G++ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGVL 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E+ ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQELEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|322616723|gb|EFY13632.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322620018|gb|EFY16891.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622328|gb|EFY19173.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627852|gb|EFY24642.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633050|gb|EFY29793.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636704|gb|EFY33407.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641270|gb|EFY37911.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645259|gb|EFY41788.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650200|gb|EFY46614.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655774|gb|EFY52076.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660100|gb|EFY56339.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665333|gb|EFY61521.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669591|gb|EFY65739.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673517|gb|EFY69619.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677443|gb|EFY73507.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679892|gb|EFY75931.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687364|gb|EFY83336.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192482|gb|EFZ77712.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198663|gb|EFZ83764.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204091|gb|EFZ89105.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208710|gb|EFZ93648.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210223|gb|EFZ95122.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217686|gb|EGA02401.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323223494|gb|EGA07820.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229488|gb|EGA13611.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232711|gb|EGA16807.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240250|gb|EGA24294.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242762|gb|EGA26783.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249078|gb|EGA32997.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323255605|gb|EGA39361.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260118|gb|EGA43743.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267118|gb|EGA50603.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271558|gb|EGA54979.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 795 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 431/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVAATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRARIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|258624401|ref|ZP_05719348.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio mimicus VM603] gi|258583248|gb|EEW08050.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio mimicus VM603] Length = 795 Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust. Identities = 269/822 (32%), Positives = 422/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ + + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATL-SGDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTIAIEVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ ++ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGEVAPVVAAESAADLPKPNQVTLRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVATTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYHEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ G E W+ ++ VD FD K D +++E S F + Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAILELTAKGKSYSFAAT 639 Query: 644 APSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+ + II EI G G HP + FGL+ FE+ ++I Sbjct: 640 KHPALHPGQAAAIIVDGKEI--GVIGTVHPELERKFGLNGRTIVFEIEWNAI-----NTR 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + EG Sbjct: 693 VIPEAAAISKFPANRRDIALVVDGNIASGEIVEACRVAGGELLKDAKLFDVYVGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 753 KKSLAIALTLQSVERTLEEADIAAAVEAIVQAVSAQYGAALR 794 >gi|145630801|ref|ZP_01786579.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|144983683|gb|EDJ91143.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] Length = 795 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 261/819 (31%), Positives = 438/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAANCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDIEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAASGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETVSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLANLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|323702097|ref|ZP_08113765.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] gi|323532979|gb|EGB22850.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfotomaculum nigrificans DSM 574] Length = 806 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 266/821 (32%), Positives = 436/821 (53%), Gaps = 34/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + +WLK+++D +S +++ D LT GL V+ V+ A + +++ +E++P+ D Sbjct: 1 MRVSYNWLKEYVDITISPQELADRLTLAGLAVDAVEEVGAEIENVVTGRIIKIEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+V GA NVR G + A G+ + + + K+RG+ES GM+ Sbjct: 61 KLVVCTVDVGQPETLQIVTGATNVREGHIIPVALEGAKL-AGGLQIKRSKLRGVESQGML 119 Query: 119 CSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL +LS D A I+ LP D P+G + L L+D I+D+ LTPNR D + + Sbjct: 120 CSGQELGIEAKLLSPDMARGILILPEDVPIGQDAKEILGLNDFILDLDLTPNRGDALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A D+ A LK E + + D+ D LC+ + +KGV+ V+P Sbjct: 180 GVARDVAAILKQDLKIPEPEFTEGEEKVQDLAQVDIVDQDLCRRYVARVIKGVKVGVSPM 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 W++ RL+A G+R IS +VD+TNYV L+ G P H FD R+ + + VRRA EKI++LD Sbjct: 240 WLQNRLRAAGVRPISNIVDVTNYVMLELGQPLHAFDYDRLKNHHIIVRRAKDNEKIVSLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E L+PD +VI + +AG++GG + D TT VL+E A + P NI R+ K LG Sbjct: 300 GVERTLNPDMLVITDEAGPVGVAGVMGGLDSEVTDQTTSVLLESAYFHPTNIRRTSKALG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI---ARNITYKPRKIVFMN 408 + ++S RFE+G+D+ G + + L+ L GGT + I IT K I+ Sbjct: 360 LRSESSMRFEKGIDINGCLRAANRAIQLMQQLAGGTVAAGVIDNFPAPITEK--TILLRP 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 V + G D+ E+ + IL RL F V + D V+VP++R D+ + DL+EE+ R++G Sbjct: 418 QRVNWVLGTDIAREEIIDILCRLQFKVQSQNDDLLVTVPTFRPDISREIDLIEEVARLHG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--- 525 +QI E LP + + + +Q V+ ++ + EVV +SF+ + Sbjct: 478 FNQI-PETLPFGP-STQGHRTPEQQLVWDVREIMTACGFFEVVTYSFVHPRIFDMMNLPP 535 Query: 526 --GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + +++ NP+S + + MRT L+P LL+ RN++R + AIFE++ V+ +G Sbjct: 536 DSRFRNVVKLQNPLSEEQTVMRTVLVPSLLEVLQRNINRRNKEGAIFEIARVFYPQ--QG 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ A + I + + W+ + R +D F K A +++ + F Sbjct: 594 QQLPAEVPVLAAVAIGQTPKTWN----QPARPMDFFFIKGVAEQLLDTL-GVAGATFSRH 648 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +HPGR IK + E VLG GE HPN+++ + L ++ L ++Q R Sbjct: 649 QDPSFHPGRCAQIKVNGE-VLGVVGELHPNVIENYELPERAVALKIDLQV--LAQADR-P 704 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 K+ L V+RDLA +V Q + A ++++IK L+ V +FDV+QG + +G Sbjct: 705 VKQYQGLPKFPAVERDLAVLVKQEVSAADMLDVIKKAGGNLLRHVDIFDVYQGTQVPQGF 764 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVA + Q T D++I M+RI +N+ +T A LR Sbjct: 765 KSVAFSMKFQAPDRTLTDEEINQKMERITKNLTAQTGAELR 805 >gi|226941668|ref|YP_002796742.1| phenylalanyl-tRNA synthetase subunit beta [Laribacter hongkongensis HLHK9] gi|226716595|gb|ACO75733.1| SyfB [Laribacter hongkongensis HLHK9] Length = 787 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 274/821 (33%), Positives = 440/821 (53%), Gaps = 53/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MKF+ WL++ ++ + + +C LT GLEVE D A PF+ + +V SV ++P+ Sbjct: 1 MKFSEHWLREWVNPALDTQALCHLLTMAGLEVE--DTEPAAPPFSGVVVAEVKSVVKHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + +Q+VCGAPNV G+ A PG+ +P + + K+RG S G Sbjct: 59 ADRLRVCQVDAGTGELVQIVCGAPNVAEGVRVPCALPGAELP-GDFRIKPTKMRGEVSNG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS KEL + DD ++ LP DAPVG + DYL L D I++ +TPNR+DC+ +RG+A Sbjct: 118 MLCSGKELGIPDDVDGLLLLPADAPVGQSIRDYLALDDQSIELKITPNRADCLSLRGVAR 177 Query: 177 DLVAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 ++ A L E I+ P+ E + L + C + ++ V A P+W Sbjct: 178 EVAALTGATLNEPAIAAVEPVIDE----RRQVMLSAPAACPRYIGRVIRNVNARAATPDW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 MR++L+ GLRSISA+VD+TNYV L++G P H FD +++ + VR A GE++ L+ + Sbjct: 234 MRRKLERAGLRSISAVVDVTNYVLLEQGQPLHAFDLAKLHGDINVRMALPGEQLTLLNGK 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L D +VIA G+ ++AGI+GG ++ D+TTDV +E A + P IA + LG+ Sbjct: 294 DVTLDADMLVIADSGKAVALAGIMGGANSEVSDDTTDVFLESAFFAPEAIAGRARRLGLT 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYKPRKIVFMNSEVK 412 +D+ YR+ERGVD ++ +LILS+CGG A + A ++ KP +V + + Sbjct: 354 SDASYRYERGVDYALQQDAIERATALILSVCGGEAGPLTEAVADLPVKPAVVVRVARVNR 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G+ +P +D ILERLGF F V PS+R D+E + DL+EEI R++G + I Sbjct: 414 VL-GLALPADDMALILERLGFEFSVVDGGFAVIPPSFRFDIEIEEDLIEEIARVHGYEAI 472 Query: 473 KSEP-------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ LP + R L ++R L R E+V+++F+ + F Sbjct: 473 PADRPHGGLAMLPQPEENSPREL---------LRRALVGRDYQEIVSYAFVDAKWETDFA 523 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG 583 G + ++NPI++ MS MR++L+ GL+ N++R +FE++ V+ E D Sbjct: 524 GNADPVRLINPIASQMSVMRSTLIGGLVDTLVGNLNRKQPRVRVFEIARVFRKEADGSVA 583 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q AG+ GS E W K+E VD FD KAD +++ P F Sbjct: 584 QPERLAGLAYGSRLPEQ----WGCKTER----VDFFDIKADVEALLFP----RHAEFRRA 631 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ + ++ G GE HPN + + L FE LD + + R + Sbjct: 632 VHPALHPGRTAEVVLDGRVI-GVVGELHPNWVHQYDLPAAPVLFE--LDLAVLLGRSRIE 688 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 + V S PV+RD+A + + + AGT+ +++ + +V +FDV++GK + EGK Sbjct: 689 AQPV---SRFQPVRRDVALVAAEGVEAGTVRQSLLGAAPAFVREVQLFDVYRGKGVDEGK 745 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A +VL+Q T D+++ + +++ + VLR Sbjct: 746 KSLAFKVLMQDTSRTLTDEEVEAAISGMIDAAAGQHGVVLR 786 >gi|198243805|ref|YP_002215788.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938321|gb|ACH75654.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326623535|gb|EGE29880.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 795 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 430/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E + ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMVPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKAMGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|319897115|ref|YP_004135310.1| phenylalanine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] gi|317432619|emb|CBY80980.1| phenylalanine tRNA synthetase, beta subunit [Haemophilus influenzae F3031] Length = 795 Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust. Identities = 263/821 (32%), Positives = 437/821 (53%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPSVSTEQLCEQITMLGLEVDGVEAVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ + + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLL-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNVAPN-- 232 G + + ++ P E++P +++ DL C + + VK V NV P Sbjct: 180 -----GVVNKQPVNQP-HFEAVPTTICDKVQIDLQAPDACPRYLLRVVKNV--NVKPQSP 231 Query: 233 -WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W++++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 232 MWIQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVAQPVQVRFAKEGEELVLLD 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G Sbjct: 292 GSTAKLQSNTLLIADQNGALAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNS 409 + TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S Sbjct: 352 LHTDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRS 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG Sbjct: 412 KLDALLGHHIETGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGY 471 Query: 470 DQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + I + PL + + + L +R +K L E + +SF+ + L Q Sbjct: 472 NSIPNNAPLAHLHMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQ 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q Sbjct: 529 EALVLPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++ + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 589 EFVLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQ 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 641 FDALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK- 698 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG Sbjct: 699 ----EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGIAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 754 KSLAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|328472977|gb|EGF43825.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio parahaemolyticus 10329] Length = 801 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 271/825 (32%), Positives = 420/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVATSIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHSKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGDVAPVVAIESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEKGWVAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQNPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGAALR 800 >gi|90406950|ref|ZP_01215141.1| phenylalanyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] gi|90311992|gb|EAS40086.1| phenylalanyl-tRNA synthetase beta subunit [Psychromonas sp. CNPT3] Length = 795 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 267/820 (32%), Positives = 436/820 (53%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ ++ ++S ++ +T GLEV+ V++ S + +V+ +PD D Sbjct: 1 MKFSEAWLREWVNPEISSAELQHQITMAGLEVDGVEDVAGQFSDVYVGEVVECGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + +VCGA N R+GL A G+ +P + + +RG S GM+ Sbjct: 61 KLQLTKIDIGAEALVDIVCGAKNCRLGLKVAVAIVGAILP-GDFEIKAATLRGQPSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL ++D + I+EL +DAP+G + YL L D IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSEAELGMADSAEGIIELSVDAPIGQSVRAYLNLDDVTIDVDLTANRADCLGIAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L I++S P ++ ++ ++ +L C + +KG+ +VA P WM Sbjct: 180 -----GVLNSISVSAPRWADVAVTLSDKMSVNLQAKEACPRYLARVIKGINASVATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RS+ A+VDIT +V L+ G P H FD +I + VR A EK+ LD +E Sbjct: 235 VEKLRRCGVRSVDAVVDITQFVLLELGQPMHAFDLEKIDTGIEVRLARQDEKLTLLDGKE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA ++ ++AGI GGK +G ++TD+L+E A + P++IA ++ G+ T Sbjct: 295 VILNRDTLVIADQSKVLAMAGIFGGKDSGVQLSSTDILLESAFFAPLSIAGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 D+ +R+ERGVD ++ L++ +CGG I A + P KI S++ Sbjct: 355 DASHRYERGVDPVLQYTAMQRATQLLVDICGGEVGPIKEALSSEDLPVQSKITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E IL RLG V + D + V P++R D++ + DL+EE+ R+YG D I Sbjct: 415 SLIGHVIDTERVTDILSRLGCDVHYKDDAWNVVAPTYRFDMKIEEDLIEEVARVYGYDNI 474 Query: 473 KS---EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + + ++ L+L ++ VL R E + +SF+ E+ ++ Sbjct: 475 PNIAPQAALVMPAHNEARLALSN-----IRNVLVGREFNEAITYSFVDPEKQLILHPDAD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPIS DMS MR SL GLL++ +N R + +FE + E + Q+ Sbjct: 530 ALILPNPISKDMSAMRVSLWTGLLESVSKNQKRQQSRVRLFETGLRFIKDEEAENGIAQQ 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M + + G+ + + W D +E R VD FD KAD +++ S F + Sbjct: 590 EMLSAVIIGNV----NEQHW-DITE---RSVDFFDLKADLEALLALCSDDASFEFIAEKH 641 Query: 646 SWYHPGRS-GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S HPG+S GI + I GY G HPN + F + FE+ LD+I + K Sbjct: 642 SALHPGQSAGIYRNGKNI--GYIGALHPNHVKAFSIKGTAIIFEIELDAISLR-----KL 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKK 763 LS RDLAF+VD+ + AG ++ I+ + + + + +FDV+QG+ + EGKK Sbjct: 695 PVAGSLSKFPANNRDLAFVVDEKLNAGKVLKFIEKIGGIHLVGLNLFDVYQGQGVAEGKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI +++Q T + +I L+ IV+ V + NA LR Sbjct: 755 SLAIGLVLQDTTRTLEEAEIADLVYNIVDAVSLEFNASLR 794 >gi|237731274|ref|ZP_04561755.1| phenylalanyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] gi|226906813|gb|EEH92731.1| phenylalanyl-tRNA synthetase subunit beta [Citrobacter sp. 30_2] Length = 795 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 262/818 (32%), Positives = 433/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALSNQITMAGLEVDGVEPVSGAFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 L E I+ + S+ +P+++ + C + VKG+ P WM+ Sbjct: 180 AVLNKAPLVEPEIAPVAAIISDVLPIQV----EAVEACPRYLGRVVKGINVKAPTPLWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E Sbjct: 236 EKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD Sbjct: 296 KLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 + +R+ERGVD ++ L++ +CGG A + N P++ I S++ R Sbjct: 356 ASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDVTNEATLPKRATITLRRSKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG D I Sbjct: 416 LIGHHIADEQVSDILRRLGCDVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYDNIP 475 Query: 474 SEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ Sbjct: 476 NTPIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQSLLHPGEEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + +PIS DMS MR SL GLL N +R IFE + DT Q Sbjct: 531 LLLPSPISIDMSAMRLSLWTGLLSTVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDL 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G+ E W+ E VD +D K D +V++ L ++F++ A Sbjct: 591 MLAGVICGNRHDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLADIQFKAEANP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + ++ + + ++ Sbjct: 643 ALHPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNK--LADRVVPQARE 699 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 V S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 700 V---SRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|167623743|ref|YP_001674037.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella halifaxensis HAW-EB4] gi|167353765|gb|ABZ76378.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella halifaxensis HAW-EB4] Length = 795 Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/817 (32%), Positives = 436/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ V+ E++ +T GLEV+ ++ A S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVNREELSHQITMAGLEVDGIEPVAADFSGVIVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGA N R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGEELIDIVCGAANCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP+DAP+G + +YLEL+D +IDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSFGELGVDIESDGIIELPLDAPIGQDVREYLELNDAVIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L ++ P + SI + D+ C + +K V A P WM Sbjct: 180 -----GVLNRQAVTEPTWNAVEASIDDAVTVDIYAEQECGRYLGRVIKNVNVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD +++ + VR+A EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLDGGIQVRKANGEEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + + ++IA + ++AG+ GG+ +G TTD+++E A + P+ I + +G+ T Sbjct: 295 ITIPAEMLIIADQVKPLALAGVFGGEDSGVTTETTDIMLECAFFAPLAILGKARKIGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 D+ +RFERGVD + V+ L+L +CGG A + A++ KP IV S++ Sbjct: 355 DASHRFERGVDPELQQKVMDRASRLVLDICGGEAGPVVEAKSEDNLPKPVHIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + + ILE LGF+V ++ V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KTLGHHIEDAEVKEILECLGFNVEVSEGQWNVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + + R V+ +L +R E V +SF+ +Q L G + Sbjct: 475 PNIAPVAQLSMSDHKESDISLKR---VRSMLVARGFQEAVTYSFVDPKQQELIHPGAEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE---GQKYM 587 + NPIS +MS MR S+ GLL A G N R +FE + N+T E Q+ M Sbjct: 532 ILPNPISVEMSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPNETAESGVSQQPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G+ E WS +S + VD FD K D +VI V+ F + + Sbjct: 592 LAAVIAGNQNDEH----WSMES----KTVDFFDLKGDLEAVIGLTVAEAEFSFRAASHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + V+G G HP++ FGL+ FE+ LD++ + +T Sbjct: 644 LHPGQCAEILRD-DRVIGIIGTVHPSLEKPFGLNGKTIIFELELDALLHANLPLAQT--- 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A ++D I A +V +I+ V + + + +FDV++GK + EGKKS+A Sbjct: 700 --VSKFPANRRDIAIVIDDAIAADDVVKLIRKVGENQLVGINLFDVYRGKGVAEGKKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +L+Q T + +I ++D +V + + NA LR Sbjct: 758 IALLLQDNARTLEEKEIAEMVDVVVSALKDEFNASLR 794 >gi|251792549|ref|YP_003007275.1| phenylalanyl-tRNA synthetase subunit beta [Aggregatibacter aphrophilus NJ8700] gi|247533942|gb|ACS97188.1| phenylalanyl-tRNA synthetase, beta subunit [Aggregatibacter aphrophilus NJ8700] Length = 796 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 263/823 (31%), Positives = 438/823 (53%), Gaps = 48/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAISTEQLCDQITMLGLEVDGVEKIAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAELP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP DAP+G L DYL L D I++SLTPNR+DC+ + G+A +L Sbjct: 120 CSFSELGIESDANGIIELPQDAPIGTNLRDYLTLDDTAIEISLTPNRADCLSIAGVAREL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + KL E + +I +++ D+ + C + + VK V +P WM+++ Sbjct: 180 --AVVNKLLENPPHFEVVKPTITDKVQIDVQAAEACPRYLLRVVKNVNVKAQSPMWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNY+ L+ G P H FD ++++ + VR A E+++ LD L Sbjct: 238 LRRCGIRSIDPIVDVTNYILLELGQPMHAFDMAKVAQPVQVRMAKENEELVLLDGTTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIITDS 356 P+ +VIA ++AGI GG+ +G + +NT DV++E A + P+ I + G+ TDS Sbjct: 298 QPNTLVIADQSGALAMAGIFGGEASGVNVENTKDVILEAAFFAPLAITGRARQYGLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRL 414 +RFERGVD + ++ +L+L +CGG A +IC A + + P++ + ++ L Sbjct: 358 SHRFERGVDFELPRKAMERATALLLEICGGEAGEICEAVSEQHLPKRQAVTLQRHKLDAL 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-K 473 G + E IL+RLG V D + V PSWR D+E + DL+EE+ RIYG + I Sbjct: 418 LGHHIENETVTDILQRLGLQVSYANDSWTVVAPSWRFDIEIEEDLIEEVARIYGYNSIPN 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + PL ++ + + ++ SR +K L S E + +SF+ + L + L + Sbjct: 478 NAPLAHLRMREHKEADVELSR---IKAALISCDFYEAITYSFVDPKIQSLLHPEVKPLVL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-------QKY 586 NPIS +MS MR SLL GLL A N +R +FE + P+G Q+ Sbjct: 535 PNPISVEMSAMRVSLLTGLLGAVIYNQNRQQNRVRLFEFGLRF---VPDGKAEFGVRQEP 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS----LRFES 642 + A + GS E WS+K+ D +D K IE +SL S +F + Sbjct: 592 VFAAVMTGSKANEQ----WSEKTAP----ADFYDLKG----YIENLLSLSSAGNRAKFIA 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + + HPG+S I + + G+ G+ HPNI GL+ + ++ I + R Sbjct: 640 KSYTALHPGQSAAIMLDGKEI-GFIGQLHPNIAQKIGLTG-----KAFVCEISVEHISRR 693 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGE 760 + +S +RDLA +V ++PA ++ + D+ + V +FDV+QG + Sbjct: 694 DVSRAKEISRFPANRRDLAVVVADNVPANDVLGACRAAGGDK-VTQVNLFDVYQGNGVAT 752 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+AI ++IQ + T +D+I ++ ++ + ++ NA LR Sbjct: 753 GHKSLAISLVIQDNEKTLEEDEINTVISAVLSELKQRFNAYLR 795 >gi|161614254|ref|YP_001588219.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167551703|ref|ZP_02345457.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|194445753|ref|YP_002040595.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205352939|ref|YP_002226740.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857155|ref|YP_002243806.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161363618|gb|ABX67386.1| hypothetical protein SPAB_01999 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404416|gb|ACF64638.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|205272720|emb|CAR37636.1| Phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205323591|gb|EDZ11430.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|206708958|emb|CAR33288.1| Phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] Length = 795 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 430/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E + ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMVPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|238797376|ref|ZP_04640876.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia mollaretii ATCC 43969] gi|238718807|gb|EEQ10623.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia mollaretii ATCC 43969] Length = 795 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 262/814 (32%), Positives = 420/814 (51%), Gaps = 31/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S +++ +T GLEV+ V++ + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDELAHQITMAGLEVDGVESVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLQLNDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++S +S S I+ D + C + VK + A P WMR++ Sbjct: 180 AVVNQLPLTEPDMSPVAASISDTFPIRVDAPQA--CPRYLGRVVKDINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A E++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIEGGIVVRLAAEDEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 KADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVIDVTATEALPKRATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G VP E IL RLG V ++ PSWR D+E + DLVEE+ RIYG + I Sbjct: 418 GHHVPSEQVSDILRRLGCQVTELGADWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R L R VK L R E + +SF+ + L Q L + Sbjct: 478 PVKADLVMTKHREADLPLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQDALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAG 590 +PIS DMS MR SLL GLL A N +R + +FE + D Q M AG Sbjct: 535 SPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDATADLGVRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + + HP Sbjct: 595 VI--------AGHRYEEHWDLVRQPIDFYDLKGDLEAILELTGKLSDVQFRAESHPALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I S E + G+ G HP + L+ FEV + + + + Sbjct: 647 GQSAAIYLSGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKL-----ADRAVPQANEI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI + Sbjct: 701 SRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAISL 760 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T +++I + R VE + ++ A LR Sbjct: 761 VLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|269102459|ref|ZP_06155156.1| phenylalanyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] gi|268162357|gb|EEZ40853.1| phenylalanyl-tRNA synthetase beta chain [Photobacterium damselae subsp. damselae CIP 102761] Length = 795 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 273/822 (33%), Positives = 424/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK---VLSVERNPD 57 MKF+ SWL++ ++ V+ E++ +T GLEV+ VD + FT VK V+ ++PD Sbjct: 1 MKFSESWLREWVNPAVNSEELAHQITMAGLEVDSVDPVAGV--FTGVKIGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDIGAEELLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMELP D +G +YL L+D IDV LT NRSDC+ + G+A Sbjct: 118 MLCSFSELGIDVESNGIMELPEDVVLGMDFREYLALNDVTIDVDLTANRSDCLSIAGLAR 177 Query: 177 DLVAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 ++ ++ E N+ P ++++I +++K + C + V+ V A P W Sbjct: 178 EVGVLNRAEVTAPEFNVVEPTAADTIAIDVKA----PAACPRYLGRVVRNVNVAAATPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VD+TNYV L+ G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDVTNYVMLELGQPMHAFDLAKIDGGIVVRMAEQGEKLTLLDGT 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +VIA + +IAGI GG+ +G T DVL+E A + P I ++ G+ Sbjct: 294 EAELNSDTLVIADQAKALAIAGIFGGEQSGVTAETKDVLLECAFFAPDAIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS +RFERGVD I ++ +L+ +CGG + I A + P+ I +++ Sbjct: 354 TDSSHRFERGVDATLQIKAMERATALLAEICGGEVAPIVEAESEADLPKAKTIELRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G ++ E+ + IL RLG V ++ P+WR D+ + DLVEE+ RIYG + Sbjct: 414 DALLGHEIASEEVVEILTRLGCDVETTDAGWKAVAPAWRFDLAIEEDLVEEVGRIYGYNN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P+ + + +L R V+ +L R E + +SF+ +Q L Sbjct: 474 IPNQSPVAALSMNTHKEANLPLKR---VRDLLVDRGYHEAITYSFVEPQQQKLIAPEIEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + PISA+MS MR SL GLL N R +FE + + E G Q+ Sbjct: 531 LILPFPISAEMSAMRVSLWTGLLNTVVFNQKRQQPRVRLFESGLRFIPEESAENGMRQEM 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFES 642 M AGI G+ +SEE VD FD K D +V+E + + F Sbjct: 591 MLAGIIAGT------------RSEEHWDIATNTVDFFDLKGDLEAVLELTANEAAFSFVP 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG++ I + V G+ G HP + FGL+ FE+ D+I Sbjct: 639 AKHPALHPGQTAAIVVDGKEV-GFIGTVHPELERKFGLNGRTVMFEIEWDAI-----NTR 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 + V +S +RD+A +VD + AG +V + N L+ DV +FDV++GK + EG Sbjct: 693 MLPEAVAISKFPANRRDIAVVVDDAVSAGAVVEACRANGGELLKDVNLFDVYRGKGVEEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T + DI ++ IV + ++ A LR Sbjct: 753 KKSLAIALTLQSAERTLEEADISGAVESIVAVLSEQFGASLR 794 >gi|88799978|ref|ZP_01115549.1| phenylalanyl-tRNA synthetase beta subunit [Reinekea sp. MED297] gi|88777256|gb|EAR08460.1| phenylalanyl-tRNA synthetase beta subunit [Reinekea sp. MED297] Length = 791 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 271/817 (33%), Positives = 431/817 (52%), Gaps = 41/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ ++ +++ D +T GLEV+ + E S + ++LS ++P+ D Sbjct: 1 MKFSEKWLRQWVNPSITSQELMDQVTMAGLEVDGSEKAAEDFSGVVVGEILSCAQHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + T +QV+CGAPN R GL +A G+ +P + + K+R ES GM+C Sbjct: 61 KLQVCQVTNGTDTVQVICGAPNARQGLKVAFAEVGAVLP-GDFKIKKAKLRQEESFGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL LS+ IMEL DA VG L +YLEL D IIDV LTPNR+DC+ +RG+A ++ Sbjct: 120 SEKELGLSEAHDGIMELATDAVVGADLREYLELDDLIIDVDLTPNRADCLSLRGLAREVG 179 Query: 180 AAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + E I+ + E+ P+ +L D+ C + + V +V+ P WM + Sbjct: 180 VLNKASVTEPTIAPVAAVHQETFPV----NLIDTKGCPRYVGRVLNDVDVSVSTPVWMAE 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSI +VD+TNYV L+ G P H FD +++ + VRRA GEKI LD QE + Sbjct: 236 RLRRSGIRSIDPVVDVTNYVMLELGQPMHGFDLDELAERIDVRRAEKGEKITLLDGQEIE 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +VIA ++AGI+GG+++G TT V +E A + PI IA + G+ TDS Sbjct: 296 LTEQILVIADAKGPLAMAGIMGGENSGVSTKTTRVFLESAFFAPIQIAGKARGYGLHTDS 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN--ITYKPRKIVFMNSEVKRL 414 +RFERGVD Q ++ L++ +CG + + N P +I V Sbjct: 356 SHRFERGVDSQLQEMAVERATQLLVDICGAKPGPLIVEENKDTVPVPAEIELYAEVVSSS 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G+++ + +IL L FS++ E D + +V PSWR D+ +ADL+EEI RIYG + + Sbjct: 416 LGMELSDQTIRQILTGLEFSILAEQDGYWKVRAPSWRFDMAIQADLIEEIARIYGYNNLP 475 Query: 474 -SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P+ + + + Q + + + S E + +SF+ + +E Sbjct: 476 VTAPMAAMKPQGPKE---QATDVNLLVDRMVSLGYQEAITYSFVEPAAQKAMFPKKDGIE 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGI 591 + NPISADMS MR SL PGLLKA N++R + +FE + + + Q M AG+ Sbjct: 533 LANPISADMSVMRVSLWPGLLKALQHNLNRQQDNVRLFETGQRFRQEEKGLAQIDMLAGV 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 GS +G W + E VD +D K D L + + F +G S HPG Sbjct: 593 VTGSRLAQG----WYESGET----VDFYDVKGD-LEQLLALIKGVEFEFVTGKNSALHPG 643 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 + I+ + ++V GY G HPN+ +G + FE+ LD RT ++ Sbjct: 644 QCARIERNGKLV-GYIGALHPNLAKQYGFKKDVFLFELRLD--------RTLPAELPSFE 694 Query: 712 SL--HPVK-RDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVA 766 L HP RDLA +VD+ + ++++ ++ + + LI + +FD+++GK + +KS+A Sbjct: 695 PLSRHPASTRDLAVVVDEDVSVSSVMDTVREMAGEDLI-SLNLFDIYRGKGIDSKRKSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + Q T DD+I M+ I++ + + +AVLR Sbjct: 754 MGLTWQNPSRTLTDDEINRFMESIIKTLQTRLDAVLR 790 >gi|189424933|ref|YP_001952110.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter lovleyi SZ] gi|189421192|gb|ACD95590.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter lovleyi SZ] Length = 801 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 269/823 (32%), Positives = 444/823 (53%), Gaps = 42/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK T +WLK+ +D D+S ++ LT +GLEVE ++ + + +VL ++P+ D Sbjct: 1 MKVTYNWLKEFVDFDLSPVELGHLLTMLGLEVEGMEQLGGGMDEVVVARVLEKNQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + + VVCGA N + G A G+ +P + + KIRG ES GM+ Sbjct: 61 KLSLCKVDNGK-EILSVVCGAQNFKQGDTVALAQIGAVLP-GDFKIKRSKIRGEESCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+D+SA IM L + +G + + L D I ++ LTPNR+DC+ V GIA + Sbjct: 119 CSEKELHLADESAGIMILSDNLTLGTPFFEAMGLKDTIFEIGLTPNRADCLSVIGIARE- 177 Query: 179 VAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 +AA LGK ++ +I P E + ++ + D++ C +A + G + +P W+ R Sbjct: 178 IAAKLGKRVRYPSIVVPEYGEPVDSKVSVTIQDAAGCPRYAARFISGCKIAPSPAWLVNR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L AVG+RSI+ +VDITN V ++ G+P H FD ++++ + VRRA GEK LD QE Sbjct: 238 LNAVGVRSINNVVDITNLVMIELGHPLHAFDYTQVAGGQIIVRRAGEGEKFNTLDGQERT 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ ++VI R ++AGI+GG+++ D TTD+L+E A +DP I R+ K LG+ T+S Sbjct: 298 LAVTDLVICDRDRAVALAGIMGGENSEIIDTTTDILLESAFFDPPTIRRTSKRLGLHTES 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-PRKIVFMNSEVKRLS 415 +RFERG DL+ + L SL+ L GG+ + + + K P I F L Sbjct: 358 SHRFERGADLEMVPKALDRAASLMAQLAGGSVATGRVDNFPSPKLPTSITFRPERANALL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ +P E + L F V + F+V++PS+R D+E + DL+EEI R+ G DQ+ + Sbjct: 418 GLALPAERMAELFRNLEFQVQPVTNGSFQVTIPSYRIDIEREIDLIEEICRLNGFDQVVA 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQR 529 +P+ QV R SL Q R V+ + M E+V++SFI+ E + L + Sbjct: 478 T-MPVAQVISDRP-SLHQRLRRSVRDHFVAEGMHEIVSFSFIAPEAADLLKLDADDPRRN 535 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE----NDTPEGQK 585 +++ NP++A+ S MRT+LLPGLL RN+ D +FE+ VY + P Sbjct: 536 SIKLCNPLAAEQSVMRTTLLPGLLDTASRNMCFRSLDLRLFEMRRVYHAVAGQEMPHEPV 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR---FES 642 Y AG+ G+ +E W + VD +DAK ++E L +R + + Sbjct: 596 Y-CAGLISGNRDVES----WCHQGAA----VDFYDAKG----IVENLFDLLQIRGAVWSA 642 Query: 643 GAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 P ++YHPG++ I + G GE HP +L + + P+ FE+ + + R Sbjct: 643 DTPETFYHPGKACRIMFGGGTI-GTVGEIHPEVLKNYEIDRPVYYFELNFEELVRLAGAR 701 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 K +V S RDLA + + + L++ ++ + + ++DV +FD++QG + Sbjct: 702 ---KAIVPPSRFPDSVRDLALLAPLELASSQLLDCVRALKQKELEDVVIFDLYQGDRVPA 758 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A+++ + T DD+++++ +++ + K +R Sbjct: 759 GHKSIALRLRYRAADRTMTDDEVQLVHQKVINALTGKLGVSVR 801 >gi|168263841|ref|ZP_02685814.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205347587|gb|EDZ34218.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 795 Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 430/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E + ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMVPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGLDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|297538933|ref|YP_003674702.1| phenylalanyl-tRNA synthetase subunit beta [Methylotenera sp. 301] gi|297258280|gb|ADI30125.1| phenylalanyl-tRNA synthetase, beta subunit [Methylotenera sp. 301] Length = 784 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 272/817 (33%), Positives = 441/817 (53%), Gaps = 46/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F+ +WL+ ++TD+ + + LT GLEVE++ A S + K+L VE++PD D Sbjct: 1 MQFSENWLRSLVNTDLDSQALSHALTMAGLEVEEMQPVAAVFSKVVVAKILLVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA N R GL+ A G+ +P + + K+RG+ES GMM Sbjct: 61 RLQVCKVDVGLAEPLQIVCGASNARAGLIAPCAMVGAELP--GISIKEAKVRGVESFGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL +S ++ ++EL +A VG + ++L+L D ++ + LTPNRSDC+ + GIA D+ Sbjct: 119 CSSKELGISAEATGLLELDSNAVVGQSIREHLDLDDNLLTLKLTPNRSDCLSITGIARDV 178 Query: 179 VA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 A G E I+ P + +S + + + ++C + + GV P+WM + Sbjct: 179 AAITGAETRFEAIIAVPAAVKSTKNVV---VTEQAVCPRYCGRLISGVNAKANTPDWMIK 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 R++ GLRSISALVD+TNYV L+ G P H FDA++++ +TVR A + E + L++Q + Sbjct: 236 RIERSGLRSISALVDVTNYVLLELGQPMHAFDAAKLNGDITVRFASANESLSLLNDQTVE 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D++VIA ++AGI+GGK DD TT++ +E A + P IA + LG+ TDS Sbjct: 296 LKTDDLVIADANGAAALAGIMGGKPTSVDDATTEIFLESAFFTPSVIAGKARRLGLSTDS 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSEVKRL 414 YRFERGVD L++ LIL +CGG A ++ + +P K+ + + Sbjct: 356 SYRFERGVDFGNTKNALEYATQLILQICGGQAGEVTEVVGSLPVRQPVKLRM----ARLV 411 Query: 415 SGIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 S + +P+E + ++L +LGF F V PS+R D+ + DL+EEI R++G D I Sbjct: 412 SVLGIPLEGAKVAQLLTQLGFVFTEVNSVFTVVPPSYRFDISIEEDLIEEIARLHGYDHI 471 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + L Q++ R L + EVVN+SF+ + G + Sbjct: 472 PATAPVANLLMLPAPEARLHQNKLR---DSLVAVGYQEVVNYSFVDESWERDLLGNDTPI 528 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMA 588 ++ NPI++++S MRTSL GLL N++R +FE+ VY N E + Sbjct: 529 KLQNPIASNLSVMRTSLWGGLLDTLTYNLNRKHDRAFLFEIGAVYFKQANGFVETTR--V 586 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 +G+ GS+ E W+ S E VD F+ KA ++ VS +E Sbjct: 587 SGLAYGSTKPEQ----WATDSTE----VDFFEVKAHVDRLVGAKVS-----YEKAEHIAL 633 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG++ I + V+G+ G+ HP + L FE+ L++I Q + Sbjct: 634 HPGQTAQILLDGK-VIGWLGKLHPKWQQQYSLMKATYLFELDLEAISSHQIPAYQ----- 687 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S L P++RDLA ++D++I G + N IK D LI +V +FD++QG+ + E KKS+A+ Sbjct: 688 EVSKLLPIRRDLAVVLDENIVVGEVFNAIKKADIPLITEVALFDLYQGQGVAENKKSLAL 747 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VL+ + T D D + +++ + + A LR+ Sbjct: 748 SVLMHDTQKTLTDSDADTTITNLLQLLQNQFAATLRN 784 >gi|68249972|ref|YP_249084.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 86-028NP] gi|81335604|sp|Q4QKM3|SYFB_HAEI8 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|68058171|gb|AAX88424.1| phenylalanyl-tRNA synthetase beta chain [Haemophilus influenzae 86-028NP] Length = 795 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 260/819 (31%), Positives = 438/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAANCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGATSGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATTLLLEICGGEAGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L + Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHKEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|87122324|ref|ZP_01078206.1| phenylalanyl-tRNA synthetase, beta subunit [Marinomonas sp. MED121] gi|86162467|gb|EAQ63750.1| phenylalanyl-tRNA synthetase, beta subunit [Marinomonas sp. MED121] Length = 794 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 260/823 (31%), Positives = 433/823 (52%), Gaps = 50/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ ++ + E++ +T GLEV++V E + + ++LS E++P+ D Sbjct: 1 MKFSENWLREWVNPAIKTEELVSQITMAGLEVDEVCAVAEEFTGVVVGQILSAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPN R G+ +A G+ + + I K+R +ES GM+ Sbjct: 61 KLKVCQVSDGA-ETFQVVCGAPNAREGIKVPFAKVGAVLGPDFKIKKA-KLRQVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL LSDDS ++EL APVG +YL+L+D IIDV LTPNRSDC+ + G+A ++ Sbjct: 119 CAASELGLSDDSDGLLELAESAPVGSGFREYLDLNDSIIDVDLTPNRSDCLSIHGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKF------DLDDSSLCKGFAMCCVKGVRNNV-AP 231 L +NI +P+E++ D+ C + +KGV +P Sbjct: 179 GVLNQTDLTPVNI--------VPVEVQIQDTFAVDVQAPQACPRYLGRVIKGVNVKAESP 230 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+ ++L+ G+RSI +VDITNYV L+ G P H FD +++S+ + VR A GEK+ LD Sbjct: 231 LWLTEKLRRSGVRSIDPIVDITNYVMLELGQPMHAFDLNQLSESIIVRMADEGEKLTLLD 290 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE L D +VIA + ++AGI+GG+ +G + T D+ +E A + PI++A ++ G Sbjct: 291 GQEISLRADTLVIADKSKPLAMAGIMGGEGSGVSEETQDIFLESAFFAPISLAGKARSYG 350 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNS 409 + TDS +RFERGVD Q ++ +LI+ + GG + + ++++ K ++ + Sbjct: 351 LHTDSSHRFERGVDAQLQNKAIERATALIVEIAGGQVAPVTEQVSQDNLPKANEVTLRRT 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS-VPSWRQDVEEKADLVEEILRIYG 468 ++ + + + + IL RL ++ D V+ PS R D+ +ADL+EE+ RIYG Sbjct: 411 KLDQYLAVSISKDQVTDILTRLDLDMVEVTDVHWVTRAPSHRFDIAIEADLIEEVARIYG 470 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + I + +P V + + Q+ + ++ L ++ E + +SFI KE S+ F Sbjct: 471 YENIPAN-MPTAAV-NFTPAAEAQTSIQTMRATLVAQGYQEAITYSFIDKESSLQFVPDV 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQ 584 + + NPISA+M MR SL+PGL+KA N +R + +FE + Q Sbjct: 529 EPVPLENPISAEMGVMRPSLIPGLMKAYLHNQNRQQSRVRMFETGRRFIGSVDALDQLDQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR---FE 641 + AG+ G+ E W S++ VD +D K S IE +L+ +E Sbjct: 589 QERLAGLIAGTREPEA----WYHNSDK----VDFYDVK----SHIEALFALNDGEMPTYE 636 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGRS + + E V G FGE HP G + + F++ L+++ + Sbjct: 637 RADVVYLHPGRSAKVIIAGEEV-GVFGELHPQFAKSLGCNQTVYLFDLNLEAVLTGKLPV 695 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGE 760 K +S V+RD A + D+ P +L II N DV+VFDV+QG+ + + Sbjct: 696 YKV-----ISKFPEVRRDFALLADRETPVASLQKIILDNAGEAFKDVSVFDVYQGQGIDD 750 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVA+ + Q T D++I +++++ + + V+R Sbjct: 751 TKKSVALGLTWQHPSHTLSDEEINKSVEQVLAALEEALGVVVR 793 >gi|16760556|ref|NP_456173.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141683|ref|NP_805025.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213426327|ref|ZP_03359077.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|289829536|ref|ZP_06547132.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|30316261|sp|Q8Z6I4|SYFB_SALTI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|25293336|pir||AE0705 phenylalanyl-tRNA synthetase beta chain [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502852|emb|CAD02014.1| phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhi] gi|29137311|gb|AAO68874.1| phenylalanyl-tRNA synthetase beta chain [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 795 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 265/818 (32%), Positives = 431/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|145629382|ref|ZP_01785180.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae 22.1-21] gi|145638881|ref|ZP_01794489.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae PittII] gi|144978225|gb|EDJ87989.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae 22.1-21] gi|145271853|gb|EDK11762.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae PittII] gi|309750858|gb|ADO80842.1| Phenylalanyl-tRNA synthetase, beta subunit [Haemophilus influenzae R2866] Length = 795 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 261/819 (31%), Positives = 436/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVEAVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRATKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFEAVPATISDKVQIDLQAPDACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 IAKLQSNTLLIADQNGPLAMAGIFGGVASGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + + P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSEAHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + E I LGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETESVTEIFHHLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESGLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|309701937|emb|CBJ01250.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli ETEC H10407] Length = 795 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 262/817 (32%), Positives = 432/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPTDAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L +L + +I + ++ C + VKG+ P WM+++ Sbjct: 180 --AVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V +++PA +++ K V++L+ V +FDV++GK + EG KS+A Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQLV-GVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +++I + + VE + ++ A LR Sbjct: 758 ISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|269962168|ref|ZP_06176521.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio harveyi 1DA3] gi|269832999|gb|EEZ87105.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio harveyi 1DA3] Length = 801 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 269/825 (32%), Positives = 419/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVSPSITTDELTHQITMAGLEVDDV--LPVAGSFNGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVAASIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEEGWMAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQHPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W ++ VD FD K D +++E + + F + +P Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLKGDLEAILELSANEKAYSFAALSP 641 Query: 646 S------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPG+S I + V G G HP + FGL+ FE+ +I Sbjct: 642 ESKKANPALHPGQSAAIIVDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWSAI----- 695 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + Sbjct: 696 NSKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSLERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|204927448|ref|ZP_03218649.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204322790|gb|EDZ07986.1| phenylalanyl-tRNA synthetase, beta-subunit [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] Length = 795 Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 430/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NAGTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|295096106|emb|CBK85196.1| phenylalanyl-tRNA synthetase beta subunit [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 795 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 266/816 (32%), Positives = 434/816 (53%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++T + + + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNTTLDSDALSNQITMAGLEVDGVEPVSGAFTGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAPVG + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPQDAPVGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 +L I+ ++ S L I+ D ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQTELNVPEIAPVEATISDVLPIQVDAPEA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDVTNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHVADAQVTDILTRLGCEVTEGQDEWKAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + EV+ +SF+ + L GQ L Sbjct: 478 PVQAGLVMGSHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKLQQLIHPGQEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS++MS MR SL GLL N +R IFE + P+ Q + GIR Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTIVYNQNRQQNRVRIFESGLRF---VPDTQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G + ++ EE VD +D K D ++++ L + F + A Sbjct: 588 Q---DLMLAGAISGNRFEEHWDLAKGTVDFYDMKGDLEAILDLTGKLSEIEFRAEAIPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + V G+ G HP + L+ FE L+ P++ + + + V Sbjct: 645 HPGQSAAIYLDGKRV-GFIGVVHPELERKLDLNGRTIVFE--LEWNPVADRVIPQAQDV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA L K + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADILAECKKVGVNQVVGVNLFDVYRGKGVAEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|317491935|ref|ZP_07950369.1| phenylalanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920056|gb|EFV41381.1| phenylalanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA] Length = 795 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 258/821 (31%), Positives = 438/821 (53%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSEQITMAGLEVDGVEPVAGEFNGVFVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRKGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPADAPIGTDIREYLQLNDHTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 L ++ ++ P + +++P I ++ C + VKG+ A P W Sbjct: 180 AV-----LNKLALNEP-AMDAVPAAIHDTFPITVESPEACPRYLGRVVKGINVKAATPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 MR++L+ G+RSI +VD+TNYV L+ G P H FD +R+ + VR A GEK+ LD Sbjct: 234 MREKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLEGGIVVRMAKEGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E LS D +VIA + ++ GI GG+H+G + T DVL+E A ++P++I + G+ Sbjct: 294 EATLSSDTLVIADQQKALAMGGIFGGEHSGVNAETQDVLLECAYFNPLSITGRARRQGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TD+ +R+ERGVD ++ L++ +CGG A + N P++ I ++ Sbjct: 354 TDASHRYERGVDPALQAKAMERATRLLIDICGGHAGPVIDVTNEAALPKRATITLRREKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 RL G V ILERLG V + ++ PSWR D+E + DLVEE+ R+YG + Sbjct: 414 DRLIGHHVADAQVTDILERLGCKVSFANNTWQAVAPSWRFDMEIEEDLVEEVARVYGYNN 473 Query: 472 IKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 I P+ + + NL L++ VK +L R E + +SF+ + L + Sbjct: 474 IPDVPVKADLIMTSHREANLPLKR-----VKTMLVDRGYQEAITYSFVDPKIQALLHPSE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PIS +MS MR SL GLL A N +R + +FE + D+ Q Sbjct: 529 ASLILPSPISVEMSAMRLSLWSGLLSAVVYNQNRQQSRVRLFETGLRFVPDSAANLGIRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M AG+ G+ R + ER + VD +D K D ++++ LD ++F++ Sbjct: 589 DVMLAGVIAGN-------RYEEHWNLER-QVVDFYDLKGDLEAILDLTGKLDDVQFKAEK 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I + + V G+ G HP++ L+ FE+ ++ +++++ + Sbjct: 641 NPALHPGQSAAIYLAGKRV-GFIGVVHPDLERKLDLNGRTVVFEIEWEA--LAERRIPQA 697 Query: 705 KKVVHLSSLHPV-KRDLAFIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 +++ S +P +RD+A +V +++PA L K + V +FDV++GK + EG Sbjct: 698 REI----SRYPANRRDIAVVVAENVPAEDILAECKKVGVNQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLVLQDTTRTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|119897375|ref|YP_932588.1| phenylalanyl-tRNA synthetase subunit beta [Azoarcus sp. BH72] gi|119669788|emb|CAL93701.1| phenylalanyl-tRNA synthetase beta chain [Azoarcus sp. BH72] Length = 796 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 260/789 (32%), Positives = 420/789 (53%), Gaps = 34/789 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ ++ + + + LT GLEVE+ A S + ++ E++P+ D Sbjct: 1 MQFSEQWLRTFVNPPLDSDALGHLLTMAGLEVEEAQPVAPAFSGIVVASIIEAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN G+ A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCKVDAGTGELLQIVCGAPNAAAGMKVPCALVGAQLP-GDFAIKAAKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL +S+D ++ELP DAPVG + YL L D + + LTPNR+DC+ + G+A ++ Sbjct: 120 CSARELGISEDHGGLLELPADAPVGCDIRAYLALDDTLFTIKLTPNRADCLSLAGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 A + +S P P+ LD + C + ++GV P+WM Sbjct: 180 AA-----ITAAELSLPAVQPVEPVTDARRAVALDVPAACPRYCGRVLRGVDARAQTPDWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ GLR ISALVDITNYV L+ G P H FD +RIS + VR A GE++L L+ Q Sbjct: 235 KQRLQRSGLRPISALVDITNYVMLELGQPLHAFDDARISGSVHVRLALPGEQLLLLNGQT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+PD++VIA + R+ ++AG++GG+ G +T DV +E A + P IA ++ G + Sbjct: 295 VSLTPDSLVIADEDRVLALAGVMGGEECGVTLDTRDVFLESAFFAPAGIAGRARSYGFSS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMNSE-VK 412 D+ +RFERGVD ++ LIL +CGG A +A + P R V + E + Sbjct: 355 DAAHRFERGVDFALGPRAIERATRLILDICGGEAGPTVVAEVASALPERPAVRLRPERAR 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G+ + +LER+ +V+ V+ PS+R DVE + DL+EE+ R++G D I Sbjct: 415 RLLGVTLDDGQMQALLERVHLNVVPSGSDLLVTPPSFRFDVEIEEDLIEELARLHGYDNI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P + +R+ S + T V+ +LA+R EVVN++F+ + F + + Sbjct: 475 PAVPPQGQLMMLERSESARSPWT--VRHLLAARGYQEVVNFAFVEEAWERDFCANEDPIR 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI++ MS MR+SL+PGL+ N R +FEV +E +G+ AG Sbjct: 533 LANPIASQMSVMRSSLVPGLVANLATNRKRQQQRVRVFEVGRCFERKA-DGEPV--AGFH 589 Query: 593 KGSS-GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 + +G + ++ ER R VD +D K D ++ P + L FE + HPG Sbjct: 590 QPVRIAALAAGGVVPEQWGERERQVDFYDVKGDLEALFAPRL----LSFEPLSHPALHPG 645 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ + + G+ GE HP + + + + FEV LDS ++ +S Sbjct: 646 RAAAVLLDGRRI-GWLGEVHPVWVQRYDVGSAPVVFEVDLDS-----ALESRLPSFGGVS 699 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 + V RDLA +V +PA ++ ++K L+ ++++FD++ GK + KKS+A +VL Sbjct: 700 RMPAVTRDLALVVAAEVPAARILEVLKAAAGPLVTEISLFDLYHGKGIDPDKKSLAFRVL 759 Query: 771 IQPLKDTFR 779 +Q DT R Sbjct: 760 MQ---DTHR 765 >gi|190575246|ref|YP_001973091.1| phenylalanyl-tRNA synthetase subunit beta [Stenotrophomonas maltophilia K279a] gi|190013168|emb|CAQ46801.1| putative phenylalanyl-tRNA synthetase beta chain [Stenotrophomonas maltophilia K279a] Length = 793 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 263/814 (32%), Positives = 426/814 (52%), Gaps = 33/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ T S +++ LT+IGLEVE+V E L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPTSASRDELSAVLTAIGLEVEEVTALGEGLDHVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ES GM+ Sbjct: 61 RLQVCRVDAGQGELLQIVCGAPNARPGLVAPLAMVGAQIGE--LKIKPAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ ++ELP DAP+G L +YL L D I++ LTPNR+DC +RGIA D+ Sbjct: 119 CSAKELGLDSDASGLLELPDDAPIGQTLVEYLGLPDASIEIKLTPNRADCFSLRGIAYDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA--PNWMRQ 236 AA ++ + + S L I+ LD + + ++GV N A P WM + Sbjct: 179 AAATRSEVLDFAADAIAAVGSRELSIQ--LDAGAEAPRYLGRVIEGV-NAAARTPLWMAE 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+R +S LVDIT YV L+ G P H +D + + VRR+ +GE + LD ++ Sbjct: 236 RLRRSGVRPVSLLVDITQYVMLELGQPMHAYDLGTLQGSIAVRRSRAGETLKLLDGRDAA 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L +V+ R +AG++GG D TT V +E A + P I G+ LG+ TD+ Sbjct: 296 LDDSFLVVTDADRAVGLAGLMGGFDTRVTDATTAVFLEAAHFAPAAIMGRGRKLGLHTDA 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKRL 414 +RFERGVD +++ L+L L GGT + + + +P IV + + R+ Sbjct: 356 GHRFERGVDPALPRTAIEYATRLVLDLAGGTPAPVTEAVREADLPQPATIVLRRARITRV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI + + RIL LG V+ + ++V+ PS R D+ + DL+EE+ RI G +QI Sbjct: 416 LGISIDDAEVERILRALGMDVVATAEGWQVTAPSRRFDIAIEEDLIEELARIQGYEQI-- 473 Query: 475 EPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--L 531 P L + + S Q V+R L +R E VN++F+ + ++L R+ + Sbjct: 474 -PTTLPGGASRVAMPSETQLDALSVRRQLIARDQQETVNFAFV--DDALLTQWQLRDGLV 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NP+SA+++ MR SLLPGL+ GRN R + +FE+ V+ +GQ Sbjct: 531 PLANPLSAELAVMRPSLLPGLVATLGRNAARQLGRVRLFEIGRVFAQQGGDGQPAPLETP 590 Query: 592 RKGSSGI-EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 R ++ E W + R VD D K D S+ S L F A ++ HP Sbjct: 591 RVAAAVCGEAQAVQWGLPT----RKVDFHDLKGDLESLAA--ASGAQLEFRPSARAYGHP 644 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 RS + + +G+ G+ HP + + + FE LD P++ ++ + + L Sbjct: 645 ARSAEVFRDG-VAIGWIGQIHPRLARAMEIEADVYAFE--LDLEPLTARRLPRAGE---L 698 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S V+RDLAF+V + + L ++ L+ D+ +FD + G+ + G KS+A+ + Sbjct: 699 SRFPAVRRDLAFLVPEQVAWADLAATVRQAAGPLLRDLNLFDRYVGQGVEPGFKSLAMGL 758 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++Q T D D+ ++ V + ++ +A +R Sbjct: 759 ILQDKSRTLTDRDVDAVVAEAVTAIEREHHARIR 792 >gi|92113927|ref|YP_573855.1| phenylalanyl-tRNA synthetase subunit beta [Chromohalobacter salexigens DSM 3043] gi|91797017|gb|ABE59156.1| phenylalanyl-tRNA synthetase beta subunit [Chromohalobacter salexigens DSM 3043] Length = 793 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 270/815 (33%), Positives = 421/815 (51%), Gaps = 33/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ + D + + + D +T GLEV+ + A I +V+ + +P D Sbjct: 1 MKFSETWLRHWVSPDWTTQALADHITMAGLEVDAIAPVAGAFDGVVIAEVVDKQPHPSAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + +QVVCGAPNV VG +A + +P + + K+RG+ES GM+ Sbjct: 61 KLNVCHVDDGGDEPVQVVCGAPNVAVGQKVPFARVNATLP-GDFKIKKAKLRGVESRGMI 119 Query: 119 CSEKELMLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L + ++ I LP APVG L D+L L D I+V LTPNR DC+ ++G+A + Sbjct: 120 CSASELELEEGTSDGIWVLPPTAPVGDGLRDWLALDDHAIEVDLTPNRGDCLSLKGMARE 179 Query: 178 LVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 + L E IS P + E+ P+ ++ + C +A ++GV P WM Sbjct: 180 VGVLSRLPLNEPEISVVTPKNQETFPVRVEA----PAQCPRYAGRVIRGVDLAAETPLWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R+I +VD+TNYV L+ G P H FD +R+ D + VR A E++ LD Q+ Sbjct: 236 TERLRRSGIRAIDPIVDVTNYVMLELGQPMHAFDLARLQDGIVVREARGDERLTLLDGQD 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA R +IAG++GG+ +G + NT D+ +E A + P+ +A ++ G+ T Sbjct: 296 IALRDGTLVIADVHRPLAIAGVMGGEASGVNANTQDIFLESAFFSPLAVAGQARSYGLHT 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +RFERGVD Q L+ L+L + GG + + + P + + Sbjct: 356 DASHRFERGVDPQLTQVALERATQLLLEIVGGDPGPVTEVASPDHLPLGCSVTLRRVRLD 415 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + + + +D + IL LG V + + V VPSWR D+ + DL+EE+ RI+G D+I Sbjct: 416 QCLSLVIADDDVVDILSGLGMHVDVVAEGWRVKVPSWRFDIALEEDLIEELARIHGYDRI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P +++ +Q +R ++R L +R E + +SF++ E G Sbjct: 476 PVR-RPAARLKLSAADETRQPLSR-LRRHLVARGYQEAITYSFVAPELQETLTPGAIAPA 533 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGI 591 + NPISADMS MR SLLPGL+KA N++R +FE V+ + Q M GI Sbjct: 534 LANPISADMSVMRASLLPGLVKAMMHNLNRQQPRVRLFETGLVFRGGLDDLEQVSMLGGI 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G EG WS E VD FD K D S++ D+ RFE+G HPG Sbjct: 594 ICGPRHPEG----WSATRER----VDFFDLKGDLESLLALTHRPDAWRFEAGEHPGLHPG 645 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 ++ I V G+ G HP + GL FE+ L++ +Q + + Sbjct: 646 QTARIICDGRPV-GWVGALHPGVRAELGLKTGAFVFELELEA--ATQGLLPAFEPL---- 698 Query: 712 SLHP-VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S HP V+RDLA +V +P L++ +++ + D+ +FDV+QG+ + +G KS+A+ + Sbjct: 699 SRHPEVRRDLALVVKDDVPVMALMDAMRDQAGEWLVDLRLFDVYQGEGIEKGHKSLALGL 758 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 Q T DD+I L+D IV + AVLRS Sbjct: 759 TWQHPSRTLNDDEINQLVDAIVGEAKSRFAAVLRS 793 >gi|84624679|ref|YP_452051.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|91208148|sp|Q2P100|SYFB_XANOM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|84368619|dbj|BAE69777.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 792 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 252/789 (31%), Positives = 418/789 (52%), Gaps = 46/789 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELAATLTAIGLEVEEVIPLGESLGQVVVARIVEAMRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARPGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D+A + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDAAGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E+ D C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVELDAGKDAPRYCGR----VIEGIDPAAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+C+GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPIGVRRSCAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + IA GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDSFLTIADAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDSALPPQAIEVATRLVLELAGGTPGPVVHAQLPQHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG + + +EV PS R D+ + DL+E++ RI+G D++ Sbjct: 415 VLGIQIDDVDVVRMLRALGMQLDAVAEGWEVMAPSRRFDIAIEEDLIEDLARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 + P +++ L + V+R L +R + E +N++F+ E+ L G Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTNG--- 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQ 584 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P+ Sbjct: 529 LVPLANPLSAELAIMRPCLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADAGAAPQES 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++AA + + ++ W E R VD D K D +++ S L F+ Sbjct: 589 QHVAAAVCGDALALQ-----WG----EAARKVDFHDVKGDLMALAA--ASGAQLEFQPST 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + +G+ G+ HP + + + FE+ L P+ Q+ Sbjct: 638 QPFGHPGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQLG--PLVQRTLPCA 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G K Sbjct: 695 GE---LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVAPGFK 751 Query: 764 SVAIQVLIQ 772 S+A+ +++Q Sbjct: 752 SLAMGLILQ 760 >gi|237745475|ref|ZP_04575955.1| phenylalanyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] gi|229376826|gb|EEO26917.1| phenylalanyl-tRNA synthetase subunit beta [Oxalobacter formigenes HOxBLS] Length = 809 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 269/815 (33%), Positives = 432/815 (53%), Gaps = 63/815 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+F+ +WL+ +D D++ +++ +T GLEVE+V + S + +VL V+++P+ D Sbjct: 1 MQFSENWLRTMVDPDLTTDELAHLMTMSGLEVEEVVPVAKPFSDIVVAEVLEVKKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRK--IR 110 ++ ++D G + +VCGAPNVR G L+G PPG E+ +++K +R Sbjct: 61 RLSVCQVDAGTGTILNIVCGAPNVRPGMKTGCALVGAVLPPG----EDGKPFSIKKGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D + IM+LP DAPVG L DYL+L D I DV LTPN++DC+ Sbjct: 117 GVESNGMLCSFRELQLSEDHSGIMDLPEDAPVGASLRDYLQLEDAIFDVKLTPNKADCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 V G+A + VAA G +S P S + +P+++ + LC F+ +KG+ Sbjct: 177 VLGVARE-VAAVSGATLNRPVSAPARVTSGDKLPVKV----EAPDLCGRFSGRVIKGINA 231 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 N P WM+QRL+ G RSISALVDI+NYV L+ G P+H++D +I LTVR GEK Sbjct: 232 NAPTPEWMKQRLERSGQRSISALVDISNYVMLEGGQPNHIYDLDKIDKSLTVRWGKKGEK 291 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L++ D+ VIA D ++ + GI+GG +T ++ +EVA W P I Sbjct: 292 VKLLNDMTVDVDDWIGVIADDTAVEFLGGIMGGDRTSVSSDTRNIFIEVAFWWPDAIRGR 351 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG--GTASDICIARNITYKPRK- 403 + TD+ +RFERGVD G + L+ I +L+L +CG G + + I P + Sbjct: 352 ARRFNFSTDASHRFERGVDYNGTVAALERITALVLEICGVEGETTVGPVDDQILNLPERK 411 Query: 404 -IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 +V + + + GI V + I RLG + + D F V+ PS+R D+E + DL+EE Sbjct: 412 PVVLRREKAESVIGIPVKADQIADIFTRLGLAFVRNGDTFTVTPPSYRFDLEIEEDLIEE 471 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQS 521 I RIYG + I + P + V ++ + R+ + +++ +A EVVN+SF+ ++ Sbjct: 472 IARIYGFENIPALPPVASNV---MRINPENVRSLFSIRQQMADLDYQEVVNYSFVEEDWE 528 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDT 580 F G + +LNPI++ MS MR++++ L+ N++R + +FE+ V+ ND Sbjct: 529 KDFAGNDNPIRLLNPIASQMSVMRSTMIGNLVANVRYNLNRKFSRVRLFEIGAVFLRNDK 588 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERC----RFVDLFDAKADALSVIEPF 632 E A G E RL + EE+ R VD FD KAD ++ P Sbjct: 589 VEDGPLTVA-------GYEQPKRLAAIAYGLSEEEQWGLPERQVDFFDVKADLEALFAP- 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 LRF HPGR ++ + + G+ GE HP+ + L + FEV + Sbjct: 641 ---AKLRFVKATHPALHPGRCARLELDGQDI-GFIGELHPSWQHRYDLPHAPILFEVDVK 696 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVD-----RLIDD 746 ++ + + +S PV RD+A +VD + +++ + D R++ Sbjct: 697 AL-----QSVEVPVYTEISRFQPVTRDIALVVDISMSVQEIIDRFYREKDNNPFCRIMQA 751 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 V +FD ++GK LG +KS+A + +Q T +D+ Sbjct: 752 VVLFDDYRGKGLGANEKSLAFRFTLQDANGTLQDE 786 >gi|58582805|ref|YP_201821.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae KACC10331] gi|188577594|ref|YP_001914523.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzae PXO99A] gi|66773837|sp|Q5GXY5|SYFB_XANOR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|58427399|gb|AAW76436.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas oryzae pv. oryzae KACC10331] gi|188522046|gb|ACD59991.1| phenylalanyl-tRNA synthetase, beta subunit [Xanthomonas oryzae pv. oryzae PXO99A] Length = 792 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 252/789 (31%), Positives = 418/789 (52%), Gaps = 46/789 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELAATLTAIGLEVEEVIPLGESLGQVVVARIVEAMRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARPGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D+A + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDAAGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E+ D C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVELDAGKDAPRYCGR----VIEGIDPAAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+C+GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPIGVRRSCAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + IA GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDSFLTIADAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPQHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG + + +EV PS R D+ + DL+E++ RI+G D++ Sbjct: 415 VLGIQIDDVDVVRMLRALGMQLDAVAEGWEVMAPSRRFDIAIEEDLIEDLARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 + P +++ L + V+R L +R + E +N++F+ E+ L G Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTNG--- 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQ 584 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P+ Sbjct: 529 LVPLANPLSAELAIMRPCLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADAGAAPQES 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++AA + + ++ W E R VD D K D +++ S L F+ Sbjct: 589 QHVAAAVCGDALALQ-----WG----EAARKVDFHDVKGDLMALAA--ASGAQLEFQPST 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + +G+ G+ HP + + + FE+ L P+ Q+ Sbjct: 638 QPFGHPGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQLG--PLVQRTLPCA 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G K Sbjct: 695 GE---LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVAPGFK 751 Query: 764 SVAIQVLIQ 772 S+A+ +++Q Sbjct: 752 SLAMGLILQ 760 >gi|283785063|ref|YP_003364928.1| Phenylalanyl-tRNA synthetase beta chain [Citrobacter rodentium ICC168] gi|282948517|emb|CBG88106.1| Phenylalanyl-tRNA synthetase beta chain [Citrobacter rodentium ICC168] Length = 795 Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust. Identities = 263/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ VD A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALSNQITMAGLEVDGVDAVASAFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGVDIREYLKLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I+ P+++ +I + ++ + C + VKG+ P WM+++ Sbjct: 180 AVLNSAPLTEPEIA-PVAA-TINDVLPISVEATEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGINVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + ++ GI GG+H+G D T +VL+E A + P+ I + G+ TD+ Sbjct: 298 SADTLVIADHTKALAMGGIFGGEHSGVSDETQNVLLECAFFSPLLITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLMDICGGEAGPVIDVTNDATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V +++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGAGEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PVQAGLIMGAHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQLIHPGEEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQASLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ A Sbjct: 593 AGVICGNRYDEH----WNLAKES----VDFYDLKGDLEAVLDLTGKLGDVQFKAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA L K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADVLSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVANCVEALKERFQASLR 794 >gi|145634921|ref|ZP_01790628.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] gi|145267787|gb|EDK07784.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus influenzae PittAA] Length = 795 Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust. Identities = 260/819 (31%), Positives = 436/819 (53%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVEAVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAANCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDIEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 180 -----GVINKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGALAMAGIFGGAISGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG A +IC A + + P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEAGEICEASSEAHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETVSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLANLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LILPNPISVEMSAMRVSLISGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + + G++ E W+ K+E VD FD K D SV+ + +RF + Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVAKQFD 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I+ + + G+ G HP+I GL+ FE+ ++I + K Sbjct: 643 ALHPGQSAAIELDGQEI-GFIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK--- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS Sbjct: 699 --EISKFPANRRDLALVVADSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T D++I ++ ++ V ++ NA LR Sbjct: 756 LAISLTVQDNEKTLEDEEINAVISAVLAEVKQRFNAELR 794 >gi|192362137|ref|YP_001982985.1| phenylalanyl-tRNA synthetase subunit beta [Cellvibrio japonicus Ueda107] gi|190688302|gb|ACE85980.1| phenylalanyl-tRNA synthetase, beta subunit [Cellvibrio japonicus Ueda107] Length = 797 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 268/825 (32%), Positives = 434/825 (52%), Gaps = 50/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + SWL++ ++ + +++ LT GLEV+ V++ + + ++++ E++PD D Sbjct: 1 MKISESWLREWVNPSIGTDELVAQLTMAGLEVDAVESVAGDFTGVIVGEIIACEQHPDAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP-----ENNMIVNVRKIR 110 C + + G QVVCGA N RVG+ +A G+ +P E + K+R Sbjct: 61 KLRVCQVAGLPDGP---AQVVCGAANARVGIKIPFATIGAQLPGASQHEEKWQIKKAKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+C + EL DD + ELP DAPVG L +YL L D +I+V LTPNRSDC+ Sbjct: 118 GVESFGMLCGQTELKAGDDDTGLWELPADAPVGTNLREYLNLDDKLIEVDLTPNRSDCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVR 226 ++G+A ++ G L +S P + +P I L S C + ++ + Sbjct: 178 LKGLAREV-----GVLNRAVVSEP-TIHPVPAAIADTFPVALHAGSACSRYVGRVIRNID 231 Query: 227 -NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 +P W++ +L GLRSI A+VD+TNYV ++ G P H FD S++ + VR A GE Sbjct: 232 ITRPSPAWLQDKLVRSGLRSIDAVVDVTNYVLIELGQPMHAFDLSKLQGGVQVRLAEQGE 291 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD+QE L+ D +VIA +IAGI+GGK + T D+ +E A ++P+ IA Sbjct: 292 PLQLLDDQEIKLNADTLVIADSKGALAIAGIMGGKASAVSAETRDIFLESAFFNPLAIAG 351 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 ++ G+ TDS +RFERGVD Q + ++ L+L + GG A + N + V Sbjct: 352 RARSYGLHTDSSHRFERGVDYQLQVDAIERATQLLLDIVGGEAGPVVHVANDELPQERQV 411 Query: 406 FMNSEVKRLSGIDVPIEDS--LRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEE 462 + +V+ +SG+ + I DS + IL RLG ++ + + +VPS+R D+ +ADL+EE Sbjct: 412 SLR-KVRIVSGLSLDIADSEVVDILTRLGLKLLASSAEGWIFAVPSYRFDIAIEADLLEE 470 Query: 463 ILRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 + R+YG +++ + L PL Q+E + L ++R L +R E + +SFI + Sbjct: 471 LARVYGYNRLPTRSLAAPL-QIEARPEAKLGLP---LLRRQLIARDYQEAITYSFIEPKL 526 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-END 579 SVLF + + NPISADM+ MRTSL PGL+ N++R +FE + + Sbjct: 527 SVLFDPQVTPVGLRNPISADMAVMRTSLFPGLVNVLRHNLNRQQTRVRLFESGLRFVPGE 586 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 Q+ + AG+ GS E W++ +E VD FD K D +++ + Sbjct: 587 QGLQQEPVLAGLIYGSRAPEA----WANTAET----VDFFDIKGDLEALLAITGDQERFS 638 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 F+ S HPG++ I E+ LG G HP++ L + FEV+L + Sbjct: 639 FKPVKHSALHPGQTAGIYRDGEL-LGVVGALHPSLQQQLDLPLSVYLFEVHLGGL----- 692 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 + + LS V+RDLA +V + +PA L+ +K V L+ ++ +FDV+ GK + Sbjct: 693 LKGRIPAFSPLSRFPEVRRDLALLVARDLPADILLEAVKTVAGELLVNLKIFDVYMGKGI 752 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T +D+I +D +V+++ +A LR Sbjct: 753 DPQRKSIAVGLTFQHPSRTLNEDEINASIDAVVKHLEVTFSATLR 797 >gi|157962290|ref|YP_001502324.1| phenylalanyl-tRNA synthetase subunit beta [Shewanella pealeana ATCC 700345] gi|157847290|gb|ABV87789.1| phenylalanyl-tRNA synthetase, beta subunit [Shewanella pealeana ATCC 700345] Length = 795 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 264/817 (32%), Positives = 436/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ V+ E++ +T GLEV+ ++ A S + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPSVNREELAHQITMAGLEVDGIEPVAAEFSGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGA N R+GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGEELIDIVCGASNCRLGLKVAVAMVGAVLP-GDFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP+DAPVG + ++L+L+D IIDV LT NR+DC+G+ G+A ++ Sbjct: 120 CSFGELGVDIESDGIIELPLDAPVGQDVREFLDLNDAIIDVDLTANRADCLGMAGLAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P +I + D+ + C + +K V +P WM Sbjct: 180 -----GVLNRQSVTEPTWDAVEATIADAVTVDIQEPQECGRYLGRVIKNVNVKAESPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV ++ G P H FD +++ + VR+ EK+ LD E Sbjct: 235 QEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKLDGGIVVRKPNGEEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + ++IA + ++AG+ GG+H+G TTD+++E A + P+ I + +G+ T Sbjct: 295 ITIPEGMLIIADHAKPLALAGVFGGEHSGVTTETTDIVLECAYFAPLAILGKARKIGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVK 412 D+ +RFERGVD + V+ L+L +CGG A + A++ KP +IV S++ Sbjct: 355 DASHRFERGVDPELQQKVMDRASRLVLEICGGEAGPVVEAKSEENLPKPVQIVLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + + ILERLGF V+ + V+ ++R D+ + DL+EE+ RIYG + I Sbjct: 415 KTLGHHIDDAEVKEILERLGFIVVVSEGLWNVTTATYRFDMAIEEDLIEEVARIYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ + D + ++ R V+ +L +R E V +SF+ +Q L G + Sbjct: 475 PNIAPIAHLSMSDHKESNINIKR---VRSMLVARGFQEAVTYSFVDPKQQELIHPGAEAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE---GQKYM 587 + NPIS +MS MR S+ GLL A G N R +FE + N+T E Q+ M Sbjct: 532 ILPNPISVEMSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPNETAESGVSQQPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G+ E W+ +S + VD FD K D +VI V+ F Sbjct: 592 LAAVIAGNQNDEH----WTMES----KTVDFFDLKGDLEAVIGLTVADAEFSFRPATHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+ I + V+G G HP++ FGL+ FE+ LD++ + +T Sbjct: 644 LHPGQCAEILRD-DRVIGIIGTVHPSLEKPFGLNGKTIIFELELDALLHANLPLAQT--- 699 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +VD I A +V +I+ V + + + +FDV++GK + EGKKS+A Sbjct: 700 --VSKFPANRRDIAIVVDDAIAANDVVKMIRKVGENQLVGINLFDVYRGKGVEEGKKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +L+Q T + +I ++D +V + + NA LR Sbjct: 758 IALLLQDNARTLEEKEIAEMVDVVVSALKDEFNASLR 794 >gi|310767527|gb|ADP12477.1| phenylalanyl-tRNA synthetase subunit beta [Erwinia sp. Ejp617] Length = 795 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 267/816 (32%), Positives = 423/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + D +T GLEV+ VD A I +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSAALSDQITMAGLEVDGVDAVAGAFHGVVIGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S + I+ELP +A +G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISVEQDGIIELPQNATIGTDMREYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I+ P+++ ++P + +D C + VKGV P WM+++ Sbjct: 180 AVLNRLPLNEAVIA-PVAA-TLPDTLPIRVDAPQACPRYLGRVVKGVNVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD RI + VR+A GE + LD E L Sbjct: 238 LRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRQAEEGETLKLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGIIGG+++G T +VL E A + P++I + G+ TD+ Sbjct: 298 SSDTLVIADEQKALAMAGIIGGENSGVSPQTQNVLFECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L++CGG A + P++ I ++ RL Sbjct: 358 HRYERGVDPMLQYKAIERATRLLLNICGGAAGPVIDVTAEAALPQRSTITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + + IL RLG VI +++ PSWR D+ + DLVEE+ RI+G D I Sbjct: 418 GHVIADAEVSDILRRLGCDVIEGQGEWQAVAPSWRFDLSIEEDLVEEVARIFGYDNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + E + +SF+ + L G+ L Sbjct: 478 PVQAGLVMTRHREADLSLKR-----VKALLVDKGYQEAITYSFVDPKVQALLHPGEANLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL A N +R + +FE + DT Q M Sbjct: 533 LPSPISVEMSAMRLSLWSGLLAAVAYNQNRQQSRVRLFESGLRFVPDTQANLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G E W + VD +D K D SV+E LD +RF + A Sbjct: 593 AGVIAGHRNEEH----WDLARDA----VDFYDLKGDLESVLELTGKLDDIRFVAAANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + GL+ FE+ + ++ + V Sbjct: 645 HPGQSAGIYLHGEHI-GFIGVVHPELERKLGLNGRTVVFELLWNK--VADRVLPDASAV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA +V K V + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADIVTECKKVGANQVVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|54298701|ref|YP_125070.1| phenylalanyl-tRNA synthetase subunit beta [Legionella pneumophila str. Paris] gi|66773880|sp|Q5X1H8|SYFB_LEGPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|53752486|emb|CAH13918.1| Phenylalanyl-tRNA synthetase, beta subunit [Legionella pneumophila str. Paris] Length = 793 Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/822 (31%), Positives = 446/822 (54%), Gaps = 49/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK + WL++ ++ ++ +++ + LT GLEV+ V+ IV +VL+ + +PD D Sbjct: 1 MKVSKLWLREWVNFSLTEQELAEQLTMAGLEVDAVNPVAGQFTHVIVAEVLNTKPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ K + +++VCGA NVR GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLTLCEVNINKDKPLKIVCGAANVRPGLRVALAMIGAHLP-GGLQIKESKLRGELSQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L++ S IMEL +AP+G L +YL L D + D+ LTPNR+DC + G+A ++ Sbjct: 120 CSATELGLAEHSEGIMELSDEAPIGMDLREYLALDDHVFDIDLTPNRADCFSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVAPNWM 234 A L KL I + +I ++ +L S C + C + +RN P WM Sbjct: 180 --AVLNKLPLIEQPIVTVAPAIDDGLRVNLIHSEACPRY---CGRIIRNLNLEAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G+R++ +VD+ NYV L+ G P H FD ++I+ + VR + SGE++ LD QE Sbjct: 235 AERLRRGGIRTLHPVVDVMNYVMLELGQPMHAFDLAKINGEINVRYSASGEQLELLDGQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA + ++AGI+GG ++ + T V +E A ++P+ IA + G+ + Sbjct: 295 VVLNDNVLVIADKEKPLAMAGIMGGANSAVQELTQHVFLESAYFNPVTIAGVARKYGLFS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM--NSEVK 412 DS RFERGVD L+ LILS+ GG + + + + P + F+ ++VK Sbjct: 355 DSSQRFERGVDPCLQSKALERATELILSISGGEPGPVIESFDKKFLPGTVSFLFDTTKVK 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L+G+ +P+ + +LE LG + E + FEV++PS R D+++ ADLVEEI+R+YG D+ Sbjct: 415 KLTGLSIPLNEMKNLLEGLGVVITKETNHFFEVTIPSHRVDLQQDADLVEEIIRLYGYDK 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQRE 530 ++++P+ T V+ +S ++ +V +++ E +++SF+ E Q L+ Q+E Sbjct: 475 LQAQPMQ-TSVQAGL-ISAKEKIATHVSSWFSAKGYHETISYSFVDPELQEALY--PQKE 530 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMA 588 +E+LNPIS+++S MR + PGL+ + N R FE+ V++ D + ++ Sbjct: 531 FMELLNPISSELSQMRAGMWPGLIASMIYNSHRQQTAVKFFEIGVVFDLDGGQLKERSCI 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G G WS E R D +D K D S+ + L+ + F + Sbjct: 591 AGLLMGEQG----NLNWS----ESARLFDFYDLKGDLQSLFAS-LKLNDVEFIQSSHHAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I + + G+ G HP + D F L + FE+ L+S IP+ + Sbjct: 642 HPGQSAQIVINGKHS-GWIGVLHPRLSDAFDLDQDVVLFELNLESLINPTIPLYKP---- 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S ++RDL+F+VD+ I A + +I+N + + VFDV+ GK + E Sbjct: 697 ------ISKYPQIRRDLSFLVDRQISAMQIERVIRNTVKEDWLKSFDVFDVYMGKGIPED 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ + +Q T D +I + + I++ + + + +LR Sbjct: 751 KKSIAVAMTLQDDTRTLVDAEINLTISAIIKKLENEFSILLR 792 >gi|251789563|ref|YP_003004284.1| phenylalanyl-tRNA synthetase subunit beta [Dickeya zeae Ech1591] gi|247538184|gb|ACT06805.1| phenylalanyl-tRNA synthetase, beta subunit [Dickeya zeae Ech1591] Length = 795 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/822 (31%), Positives = 432/822 (52%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPSDAPLGTDIREYLKLDDNTIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L E+ ++ P + S +I +D + C + VKG+ V P WM Sbjct: 180 AV-----LNELVLTSPTTEPVSATITERFPIQVDATEACPRYLGRVVKGINVKAVTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD +R+ + VR A GE + LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLEGGIVVRMAKEGETLRLLDGTD 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++ GI GG+H+G + T DVL+E A ++P++I + G+ T Sbjct: 295 ATLSADTLVIADHQKALAMGGIFGGEHSGVNAETQDVLLECAYFNPLSITGRARRYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEV 411 D+ +R+ERGVD ++ L+L +CGG A D+ +++ + I ++ Sbjct: 355 DASHRYERGVDPALQYQAIERATRLLLDICGGDAGPVVDVTSEKDLPVRA-TITLRRDKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 RL G + E IL RLG V D ++ PSWR D+E + DLVEE+ R+YG + Sbjct: 414 DRLIGHVISDEKVSDILNRLGCQVTKTADGWQAVAPSWRFDMEIEEDLVEEVARVYGYNN 473 Query: 472 IKS----EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I + PL +TQ + +L+L++ VK +L R E + +SF+ + L Sbjct: 474 IPNIPTQAPLKMTQHREA-DLTLKR-----VKTLLVDRGFQEAITYSFVDPKIQSLIHPD 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 + L + +PIS +MS MR SL GLL A N +R + +FE + D Sbjct: 528 EDALMLPSPISVEMSAMRLSLWSGLLGAVVYNQNRQQSRLRVFESGLRFVPDQSADLGVR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ G+ + + + + VD +D K D +V+ L ++ F + Sbjct: 588 QETMLAGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSAVEFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I S E + GY G HP + L+ FEV D + Sbjct: 640 HHCALHPGQTAAIYLSGERI-GYAGVIHPELERKLDLNGRTVVFEVLWDKL-----SERV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 + +S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + EG Sbjct: 694 LPEAADISRFPANRRDIAVVVAENVPAGDVLAECKKVGANQLV-GVNLFDVYRGKGVAEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 753 YKSLAISLVLQDTARTLAEEEIAATVAQCVAALKQRFQASLR 794 >gi|326628012|gb|EGE34355.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 795 Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 429/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E + ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMVPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLV E+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVGEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|307254424|ref|ZP_07536262.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258883|ref|ZP_07540615.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306862723|gb|EFM94679.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306867234|gb|EFM99090.1| Phenylalanyl-tRNA synthetase beta chain [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 795 Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust. Identities = 270/821 (32%), Positives = 434/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELSIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + + P+ SE +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRAEVKAPVISEVPATIADKVAVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIDGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKGALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P++ + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +VI D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIEDETVTDILTRLGLNVIFANDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEVNRIRT---ALVDSDYQEVVTYSFVDPKKQALLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL LL N R IFE + D +GI Sbjct: 532 ILPNPISSEMSAMRLSLLTSLLDTIAYNQSRQQTRVRIFEGGLRFIPDA-----AAESGI 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQELVFGAAIVGDKRPVHWESKGEA----VDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ D+I P+ K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGDAIANRPVPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGK 762 +S RD+A +VD+++PAG +++ ++ + + V +FDV++G +L GK Sbjct: 699 -----EISKFPANNRDIAVVVDENVPAGDVLDACRHAGGVKLVAVNLFDVYRGANLAAGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T +++I ++ ++ + ++ A LR Sbjct: 754 KSLAISLTVQDTEKTLEEEEISTVIQAVLAELAQRFQAYLR 794 >gi|288934889|ref|YP_003438948.1| phenylalanyl-tRNA synthetase subunit beta [Klebsiella variicola At-22] gi|288889598|gb|ADC57916.1| phenylalanyl-tRNA synthetase, beta subunit [Klebsiella variicola At-22] Length = 795 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD L+ L++ LCGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTNEETLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL+RLG V D+++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 418 GHHIDDAQVTDILQRLGCEVTVGQDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDA 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKIQQLIHAGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS++MS MR SL GLL N +R + IFE + DT P G Q M Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTQAPLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG G+ E W+ E VD +D K D SV++ L + F A + Sbjct: 593 AGAICGNRYEEH----WTLAKET----VDFYDLKGDLESVLDLTGKLADIEFRGEAIAAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+AI Sbjct: 699 DISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + R VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVARCVEALKERFQASLR 794 >gi|254282817|ref|ZP_04957785.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR51-B] gi|219679020|gb|EED35369.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR51-B] Length = 790 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 260/821 (31%), Positives = 433/821 (52%), Gaps = 48/821 (5%) Query: 1 MKFTLSWLK-DHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL+ D +D + E + LT GLEV+ V + S + ++++ E++P+ Sbjct: 1 MIISEQWLRQDWVDPSIDTETLSHQLTMAGLEVDSVAPVAGSFSGVIVAEIVAAEQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +DTG + +Q+VCGAPN RVGL A G+ +P + + K+RG+ES GM Sbjct: 61 DKLRLCEVDTGDGR-VQIVCGAPNARVGLKAPLAQVGAVLP-GDFKIKKAKLRGVESRGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +C+E EL LS+++A +MEL DAPVG L DYL L D I++ LTPNR+DC+G+ G+A + Sbjct: 119 LCAEAELELSEENAGLMELASDAPVGADLRDYLSLDDNAIEIGLTPNRADCLGLAGVARE 178 Query: 178 LVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 + L + + PL + +I + ++ C + ++ + + +P + Sbjct: 179 VAV-----LNGLAVKNPLGGSIAATIDDDFPIRIEAPEQCPRYLGRVIRSIDLSRPSPRY 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +RL+ GLRSI +VD+TNYV L+ G P H FD +S + VR A S E+I LD Sbjct: 234 MVERLRRCGLRSIDPVVDVTNYVMLELGQPLHAFDLQSLSGGIVVREARSEERITLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + LSP ++IA + R ++AGI+GG+++G ++TTD+ +E A + P IA ++ G+ Sbjct: 294 DVALSPGTLLIADEERPLAMAGIMGGENSGVSESTTDLFLESAFFAPEPIAGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TD+ +R+ERGVD + ++ L+L + GG A + Y P ++ + + Sbjct: 354 TDASHRYERGVDPELQRVAIERATELLLEIVGGEAGPVSEKTAAEYLPTATPVLLRPARI 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R+ G ++ + IL LGFSV + + + + PSWR D+E++ DL+EE+ R+YG ++ Sbjct: 414 ARVLGFEMDAAEVESILTGLGFSVTSDTEGWHCAAPSWRFDIEQEVDLIEELARVYGYNR 473 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQ 528 LP++++ N + Q + + R+ LA+R E + +SF+ + F Sbjct: 474 -----LPVSRIHAALNFAPQPEARKPLTRLKHELAARGFTEAITYSFVPSDLQSAFDPEV 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + NPIS++M+ MRTSL+PGLLK N +R + FE + Q+ M Sbjct: 529 TPVGLRNPISSEMTVMRTSLIPGLLKVLSHNRNRQASRQRFFEAGLRFLPGESLDQQPMV 588 Query: 589 A----GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 A G+R S W+ +E VD +D KA A+ ++ L F Sbjct: 589 ALAMTGLRDSES--------WTSTTEP----VDFYDMKA-AIEMLFGHREHSPLSFVQIE 635 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ + + G G HP+I D L P F LD + + Sbjct: 636 RPGLHPGQTAEVHVDGQAA-GVLGAVHPSIADLLDL--PAATFVAELDQRLLMATSLPEA 692 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKK 763 ++V S V+RDLA +++ +PA L+ + ++ +DDV VFDV+ G +GE +K Sbjct: 693 QEVSRYPS---VRRDLALLMEHTVPASALMRVAAESAGAYLDDVVVFDVYSGAGVGEDQK 749 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+AI + + + T D +I M ++++++ +K N LRS Sbjct: 750 SLAIGLTFRHPERTLSDSEISEAMTQVIDSLGEKLNVKLRS 790 >gi|325919873|ref|ZP_08181863.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas gardneri ATCC 19865] gi|325549657|gb|EGD20521.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas gardneri ATCC 19865] Length = 792 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 256/806 (31%), Positives = 422/806 (52%), Gaps = 54/806 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ S +++ TLT+IGLEVE+V EAL + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQASRDELAATLTAIGLEVEEVTPLGEALGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GLL A G+ I + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLLAPLALVGAQI--GALTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC GVRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFGVRGIAFDV 178 Query: 179 VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +++ D C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAGEVAPVSTRTLAVQLDAGHDAPRYCG----RVIEGIDPAAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+ SGE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLQGPIGVRRSRSGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDNFLTITDAGRPVALAGLMGGLDTRVTETTRNVFLEAAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GG + A+ + +P I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGMPGPVVHAQLPQHLPQPANILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + + RIL LG + + ++V PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDAEVARILTALGMQLDAVAEGWQVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 + P +++ L + V+R L +R + E +N++F+ E+ L G Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDANLLERWQLTDG--- 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQ 584 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P+ Sbjct: 529 LVPLANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFTASAETGAAPQEA 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++AA + + ++ W E R VD D K D +++ S L F+ Sbjct: 589 QHVAAAVCGDALALQ-----WG----ESARKVDFHDLKGDLVALAA--ASGAVLDFQPST 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + +G+ G+ HP + + + FE+ L P+ Q+ + Sbjct: 638 QPFGHPGRSADIHRDG-VHIGWIGQVHPRLAKQLEIDVDVIAFELQL--APLVQRALPRA 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + LS V+RDLAF+V + + L ++ V L+ +V +FD + G+ + G K Sbjct: 695 GE---LSRFPSVRRDLAFLVPEEVSWAALSASVRTTVGPLLREVQLFDRYVGQGVEPGFK 751 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDR 789 S+A+ +++Q D+ R L DR Sbjct: 752 SLAMGLILQ--------DNSRTLTDR 769 >gi|104781111|ref|YP_607609.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas entomophila L48] gi|95110098|emb|CAK14803.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas entomophila L48] Length = 793 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 263/827 (31%), Positives = 434/827 (52%), Gaps = 59/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILTTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPN R G+ +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGA-ETFQVVCGAPNARPGIKIPFAMIGAELP-GDFKIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 119 CSASELQISEENDGLLELAADAPVGEDIRKYLNLDDASIEIGLTPNRGDCLSLAGLARDV 178 Query: 179 VAAGLGKLKEINISCPL-------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A L ++ ++ P+ E P+E+ + C + ++ V + Sbjct: 179 SA-----LYDVPVTRPVVPAVPAAHDEVRPVEVS----APAACPRYLGRVIRNVDLSKPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKN 349 D QE L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI++A ++ Sbjct: 290 DGQEVALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARS 349 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFM 407 G+ TD+ +R+ERGVD Q ++ +LIL + GG A + + + P I Sbjct: 350 YGLHTDASHRYERGVDSQLAREAMERATALILEIVGGEAGPVVETVSEQHLPNIAPITLR 409 Query: 408 NSEVKRLSGIDV---PIEDSLRILE-RLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++ G+++ +E L LE + S GE+ V+VPS R DV + DL+EE+ Sbjct: 410 AERITQMLGMEMDAAQVEQLLNALELKTSASGAGEWT---VTVPSHRFDVSLEVDLIEEL 466 Query: 464 LRIYGVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 R+YG + + ++ P + E + L ++R+L +R E + +SFI Sbjct: 467 ARLYGYNNLPVRYPQARLAPQARPETRGELP-------NLRRLLVARGYQEAITYSFIDP 519 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + LF G L + NPIS+DM+ MR SL PGL+KA N++R +FE + Sbjct: 520 KLFELFTPGVEPLLLANPISSDMAAMRASLWPGLVKAMQHNLNRQQDRVRLFESGLRFVG 579 Query: 579 DTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + Q+ M AG+ GS EG W++ + +D FD KAD +++ +L Sbjct: 580 QLGDLKQQPMIAGVVTGSRLPEG----WANGRDG----IDFFDVKADVEALLGYSGALSD 631 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 F +G HPG++ I+ + V GY G HP + GL P+ FE+ L + Sbjct: 632 FTFVAGKHPALHPGQTARIERDGKEV-GYLGAIHPELAKTLGLDRPVFVFELVLGDV--- 687 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + K LS +RDLA I + + + +++ +I+ N + D+ +FDV+QGK Sbjct: 688 --VEGRLPKFSELSKFPETRRDLALIAGRDVASSSVLEVIRDNAGEWLTDLRLFDVYQGK 745 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A+ + Q T DD++ + I+ ++ ++ N LR Sbjct: 746 GIDPDRKSLAVGLTWQHPSRTLNDDEVNETLQTILTSLEQRLNTTLR 792 >gi|166711593|ref|ZP_02242800.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas oryzae pv. oryzicola BLS256] Length = 792 Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust. Identities = 251/789 (31%), Positives = 419/789 (53%), Gaps = 46/789 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELAATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGRGELLQIVCGAPNARPGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D+A + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDAAGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E+ D C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVELDAGKDAPRYCG----RVIEGIDPAAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + ++VRR+ +GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGTISVRRSRAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + IA GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDSFLTIADAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPQHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG + + ++V PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIEDADVVRMLRALGMQLDAVAEGWDVMAPSRRFDIAIEEDLIEELARIHGYDRMP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 + P +++ L + V+R L +R + E +N++F+ E+ L G Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLLARELQETINYAFVDAALLERWQLTDG--- 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQ 584 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P+ Sbjct: 529 LVPLANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADAGAAPQES 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++AA + + ++ W E R VD D K D +++ S L F+ Sbjct: 589 QHVAAAVCGDALALQ-----WG----EAARKVDFHDVKGDLMALAA--ASGAQLEFQPSR 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + +G+ G+ HP + + + FE+ L P+ Q+ + Sbjct: 638 QPFGHPGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQLG--PLVQRTLPRA 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G K Sbjct: 695 GE---LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFK 751 Query: 764 SVAIQVLIQ 772 S+A+ +++Q Sbjct: 752 SLAMGLILQ 760 >gi|156934284|ref|YP_001438200.1| phenylalanyl-tRNA synthetase subunit beta [Cronobacter sakazakii ATCC BAA-894] gi|156532538|gb|ABU77364.1| hypothetical protein ESA_02115 [Cronobacter sakazakii ATCC BAA-894] Length = 795 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 269/817 (32%), Positives = 434/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSEALANQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGEHLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 L +I+ P+S+ +++P+++ D + C + VKG+ P WM Sbjct: 180 AVLNAEPLNVPDIA-PVSATINDTLPIQV----DAADACPRYLGRVVKGIDVTAPTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE + LD E Sbjct: 235 REKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGETLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA + ++ GI GG+H+G + T +VL+E A + P+ I + G+ T Sbjct: 295 ATLNADTLVIADHQKALAMGGIFGGEHSGVNGETRNVLLECAFFAPLAITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L +CGG A + + T+ P + I S++ Sbjct: 355 DASHRYERGVDPQLQFKAMERATRLLLDICGGEAGPVIDITSETHLPTRATITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G + IL+RLG V D+++ PSWR D+ + DLVEE+ R+YG D I Sbjct: 415 RLIGHHIADAQVTDILKRLGCEVTEGQDEWQAVAPSWRFDIAIEEDLVEEVARVYGYDNI 474 Query: 473 KSEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 +EP+ + V + R L R VK +L EV+ +SF+ + L G+ L Sbjct: 475 PNEPVQASLVMGNHREADLSLKR---VKTLLNDHGFQEVITYSFVDPKVQQLLHPGEEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + +PIS++MS MR SLL GLL N +R + IFE + P+ Q + GI Sbjct: 532 ILPSPISSEMSAMRLSLLSGLLTTVVYNQNRQQSRVRIFETGLRF---VPDTQADL--GI 586 Query: 592 RKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 R+ + +G L ++ EE VD +D K SV+E L + F + A Sbjct: 587 RQ---DLMLAGALCGNRYEEHWDLAKASVDFYDLKGTLESVLELTGKLSEIEFRAEANPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E + G+ G HP + L+ FE+ IS++ + ++V Sbjct: 644 LHPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELLWSK--ISERAIPQAQEV 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+A Sbjct: 701 ---SRFPANRRDIAVVVAENVPAADILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +D+I + + V + ++ A LR Sbjct: 758 ISLILQDTGRTLEEDEIAATVAKCVTALKERFQASLR 794 >gi|24112891|ref|NP_707401.1| phenylalanyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 301] gi|30063020|ref|NP_837191.1| phenylalanyl-tRNA synthetase subunit beta [Shigella flexneri 2a str. 2457T] gi|110805477|ref|YP_688997.1| phenylalanyl-tRNA synthetase subunit beta [Shigella flexneri 5 str. 8401] gi|41018334|sp|Q83L36|SYFB_SHIFL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|24051835|gb|AAN43108.1| phenylalanine tRNA synthetase, beta-subunit [Shigella flexneri 2a str. 301] gi|30041269|gb|AAP16998.1| phenylalanine tRNA synthetase, beta-subunit [Shigella flexneri 2a str. 2457T] gi|110615025|gb|ABF03692.1| phenylalanine tRNA synthetase, beta-subunit [Shigella flexneri 5 str. 8401] gi|281600922|gb|ADA73906.1| Phenylalanyl-tRNA synthetase beta chain [Shigella flexneri 2002017] gi|313649265|gb|EFS13699.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri 2a str. 2457T] gi|332758743|gb|EGJ89062.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri 2747-71] gi|332759233|gb|EGJ89542.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri K-671] gi|332762547|gb|EGJ92812.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri 4343-70] gi|332767224|gb|EGJ97419.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri 2930-71] gi|333018153|gb|EGK37455.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri K-304] Length = 795 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 432/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 +R+ERGVD PVL+H L++ +CGG A + N P++ I S+ Sbjct: 358 HRYERGVD-----PVLQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + Sbjct: 413 LDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYN 472 Query: 471 QIKSEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I EP+ + + + +LSL++ VK +L + EV+ +SF+ + + G Sbjct: 473 NIPDEPVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG-- 583 L + +PIS +MS MR SL GLL N +R IFE + DT P G Sbjct: 528 VEALLLASPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ G+ E W+ E VD +D K D SV++ L+ + F + Sbjct: 588 QDLMLAGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 640 ANPALHPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG Sbjct: 699 -----EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|307131172|ref|YP_003883188.1| phenylalanine tRNA synthetase, subunit beta [Dickeya dadantii 3937] gi|313104016|sp|P37984|SYFB_DICD3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|306528701|gb|ADM98631.1| phenylalanine tRNA synthetase, beta subunit [Dickeya dadantii 3937] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 260/821 (31%), Positives = 429/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E+ ++ P + + +I +D + C + VKG+ A P WM Sbjct: 180 AV-----LNELALTAPATEPVTATIADRFPIQVDATEACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD +R+ + VR A GE + LD + Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLEGGIVVRMAKEGETLRLLDGTD 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++ GI GG+H+G + T DVL+E A ++P++I + G+ T Sbjct: 295 ATLSADTLVIADHQKALAMGGIFGGEHSGVNGETQDVLLECAYFNPLSITGRARRYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD ++ L+L +CGG A + A + P + I ++ Sbjct: 355 DASHRYERGVDPALQHQAMERATRLLLDICGGEAGPVVEAVSEKDLPARATIALRRDKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G + E IL RLG V D ++ PSWR D+ + DLVEE+ R+YG + I Sbjct: 415 RLIGHVISDEKVSDILNRLGCQVTQTADGWQAVAPSWRFDMAIEEDLVEEVARVYGYNNI 474 Query: 473 KS----EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + PL +TQ + +L+L++ VK +L E + +SF+ + L G+ Sbjct: 475 PNIPTQAPLKMTQ-HREADLALKR-----VKTLLVDHGFQEAITYSFVDPKIQSLIHPGE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PIS +MS MR SL GLL A N +R + +FE + D Q Sbjct: 529 DALILPSPISVEMSAMRLSLWSGLLGAVVHNQNRQQSRLRLFESGLRFVPDQRADLGVRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + M AG+ G+ + + + + VD +D K D +V+ L L F + + Sbjct: 589 ETMLAGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSVLEFRAES 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ I + E + GY G HP + L+ FEV D + Sbjct: 641 HPALHPGQTAAIYLAGERI-GYIGVIHPELERKLDLNGRTVVFEVLWDKL-----AERVV 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A +V + +PAG ++ K V ++L+ V +FDV++GK + EG Sbjct: 695 PEAADISRFPANRRDIAVVVAESVPAGDVLAECKKVGANQLV-GVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 754 KSLAISLVLQDTARTLAEEEIAATVAQCVAALKQRFQASLR 794 >gi|269139157|ref|YP_003295858.1| phenylalanyl-tRNA synthetase beta subunit [Edwardsiella tarda EIB202] gi|267984818|gb|ACY84647.1| phenylalanyl-tRNA synthetase beta subunit [Edwardsiella tarda EIB202] gi|304559081|gb|ADM41745.1| Phenylalanyl-tRNA synthetase beta chain [Edwardsiella tarda FL6-60] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 431/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECHQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+EL DAP+G L +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGICEDHSGIIELAQDAPIGCDLREYLQLDDHAIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLK-EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 A L +L + + P+++ SI ++ C + V+G+ P WM + Sbjct: 180 --AVLNRLPLNMPQTAPVAA-SIDDRFPIAVEAPEACPRYLGRVVRGIDVTAKTPLWMSE 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+RSI +VD+TNYV ++ G P H FD SR+ D + VR A GE + LD + Sbjct: 237 KLRRCGIRSIDPVVDVTNYVLMELGQPMHAFDLSRLQDGIVVRMAREGETLTLLDGSQAT 296 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS D +VIA + ++ GI GG+H+G + T DVL+E A ++P+ I + G+ TD+ Sbjct: 297 LSSDTLVIADHQQALALGGIFGGEHSGVNAETRDVLLECAYFNPLAITGRARRYGLHTDA 356 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRL 414 +R+ERGVD Q ++ L+L+LCGG A + N Y +P I S++ RL Sbjct: 357 SHRYERGVDPQLQQRAMERATELLLALCGGQAGPVIDVTNDAYLPQPANITLQRSKLDRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + L IL+RLG V ++ PSWR D+ + DL+EE+ R+YG + I Sbjct: 417 IGHHIDDAQVLDILQRLGCQVTAVDGGWQAVAPSWRFDMAIEEDLIEEVARVYGYNNIPD 476 Query: 475 EPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 PL + + NL L++ VK +L R E + +SF+ + L L Sbjct: 477 VPLRADLVMTAHREANLPLKR-----VKTLLVDRGYQEAITYSFVDPKVQALLHPQTSPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS DMS MR SL GLL A N +R + +FE + D Q M Sbjct: 532 ILPNPISVDMSAMRLSLWTGLLGAVVYNQNRQQSRVRLFESGLRFVPDESANLGIRQDVM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G E G ER + VD +D K D +V+E LD+++F + A Sbjct: 592 LAGVIAGHREEEHWGI-------ER-QVVDFYDLKGDLEAVLELTGKLDAVQFRAEAHDA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E + G+ G HP + L+ FEV ++ ++++ + +++ Sbjct: 644 LHPGQSAALYLHGERI-GFIGVVHPELERKLDLNGRTVVFEVCWNA--LAERLIPQAREI 700 Query: 708 VHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 S +P +RD+A +V +++PA ++ K V + V +FDV+ GK + EG KS+ Sbjct: 701 ----SRYPANRRDIAVVVAENVPAEDVLAECKKVGANQVVGVNLFDVYCGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLVLQDTTRTLEEEEIAATVAKCVEALKQRFQASLR 794 >gi|332306905|ref|YP_004434756.1| phenylalanyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174234|gb|AEE23488.1| phenylalanyl-tRNA synthetase, beta subunit [Glaciecola agarilytica 4H-3-7+YE-5] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 441/821 (53%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ D+S E++ D +T GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPDISTEQLADQITMAGLEVDGVEPVAGEFSGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKINVGDEELIDIVCGAPNCRQGLKVAVAKVGAVLP-GNFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAPVG + +YL+L D I+V LTPNR+DC+G+RG+A ++ Sbjct: 120 CSFSELGISDDHDGIVELPADAPVGQDIREYLQLDDVTIEVDLTPNRADCLGMRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G L + N+ P+ E + EI L C + +K + N +P W Sbjct: 180 -----GVLNQSNVDMPVYPE-VATEITDKRGISLAAPQACPRYLGRVIKNINANARSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ G+RSI A+VD+TN+V L+ G+P H FD ++ + VR A E+++ LD Sbjct: 234 LQEKLRRSGVRSIDAVVDVTNFVLLELGHPMHAFDNDTLAGDIVVRMAEQDEELVLLDET 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L + +VIA + ++AGI GG +G + ++ +E A + P I + G+ Sbjct: 294 KIKLKDNTLVIADQEKALAMAGIFGGLASGVTSTSQNIFLESAFFAPDAIMGKARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEV 411 TD+ +R+ERGVD Q ++ +L+L + GG A I A + Y P + +V + + Sbjct: 354 TDASHRYERGVDPQMQRQAMERATALLLDIVGGEAGPIVEATDEQYIPPVKDVVLRAARL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R+ GI++ IL RLG + +++VSVP++R D+ + DL+EEI R+YG + Sbjct: 414 SRVLGIEIEASVVGDILTRLGLNASESDGQWQVSVPAYRFDISIEEDLIEEIARVYGYNN 473 Query: 472 IKSEPLPLTQVEDKRNLSLQQS-RTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQR 529 I P E K + +Q+ +K L +R E + +SF+ K QS L+ Sbjct: 474 I---PNVAPSAELKMSGCKEQALEVNDLKLALVNRDYQEAITYSFVDPKVQSQLY----P 526 Query: 530 ELEIL---NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 E++ + +PIS+DMS MR S GLL+A N R + +FE + P+ + Sbjct: 527 EIDAIVLPHPISSDMSAMRVSAWTGLLQAVSYNQKRQQSRVRLFESGLRF---IPDASEK 583 Query: 587 MAAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M G+R+ S SG+ +G L + + VD FDAKAD +++ +D+ RFE+ Sbjct: 584 M--GVRQESVFSGVI-AGNLHEANWDRTDKAVDFFDAKADVEALLSQVAPIDTFRFEAAQ 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S HPG+S I + +G G HP GL+ + FE+ + + + KK + Sbjct: 641 HSALHPGQSAAI-YRGDTFIGVLGAVHPKFEKLLGLNGRVFVFELEIAAFGV--KKLPEA 697 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGK 762 K++ S +RD+A +VD G +++ I+ ++L+ + +FD+++GK + G Sbjct: 698 KEI---SKFPANRRDIAIVVDDDKVVGEILDCIQKFGANQLV-GLNLFDIYRGKGIEPGF 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q + T + +I+ ++D I+ + +K A LR Sbjct: 754 KSLAISLTLQDMARTLEEAEIQAVVDGILTKLSEKFGATLR 794 >gi|300311299|ref|YP_003775391.1| phenylalanyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] gi|300074084|gb|ADJ63483.1| phenylalanyl-tRNA synthetase beta chain protein [Herbaspirillum seropedicae SmR1] Length = 808 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 271/830 (32%), Positives = 440/830 (53%), Gaps = 48/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F+ +WL+ ++ ++ +++ LT GLEVE+V+ PFT V +VL V ++PD Sbjct: 1 MQFSENWLRTMVNPTMTSDELSHLLTMSGLEVEEVE--PVAPPFTNVVVGEVLEVAKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMI-VNVRKI 109 D + R++ + +VCGAPNVR GL +G PPG P+ + V K+ Sbjct: 59 ADRLNVCRVNVHTGTILNIVCGAPNVRAGLKVPCAMVGAVLPPG---PDGKPFEIKVGKL 115 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 RG+ES GM+CS +EL LS+D ++ELP DAPVG DYL+L+D + LTPN++DC+ Sbjct: 116 RGVESQGMLCSARELKLSEDHGGLLELPDDAPVGQNFRDYLQLNDLKFTIKLTPNKADCL 175 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS--LCKGFAMCCVKGVRN 227 V G+A ++ A LK + S ++ L+ K + S+ LC FA ++G+ Sbjct: 176 SVLGVAREVSALTGTPLK----APTFQSAAVNLDEKLPVRISAPDLCGRFAGRVIRGLNA 231 Query: 228 NVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 A P WM+QRL+ G R ISALVDI+NYV L+ G PSHVFD +I L VR GE Sbjct: 232 KAATPQWMKQRLERSGQRPISALVDISNYVMLELGRPSHVFDLDKIHGSLDVRWGRKGES 291 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ ++ VI+ D ++S+AGI+GG +TT++ +E A W P I Sbjct: 292 LKLLNGNTVEVDEWVGVISDDKELESLAGIMGGDATAVSLDTTNIYLEAAFWFPQAIQGR 351 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKPRK-- 403 + TD+ +RFERGVD ++ ++ I +L+L +CG + + + I P++ Sbjct: 352 ARRYNFSTDAAHRFERGVDFATVVDHIERITALLLEICGTAETRVGPVDDQIVNLPKRAP 411 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + + ++ G+++ E I +RLG S + F V+ PS+R D+E + DL+EE+ Sbjct: 412 VQLRTARAAKVIGVEITDEMVSDIFKRLGLSFDYQPGLFSVTPPSYRFDIEIEEDLIEEV 471 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSV 522 R+YG + I + LP R ++ + +R+ + ++R+LA + EVVN+SF+ Sbjct: 472 ARVYGFENIPA--LPPVAAHAMR-IAPENTRSLFAIRRLLADQDYQEVVNFSFVESAWEA 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-- 580 F G +++LNPI++ MS MR+SL+ GL+ NV+R A +FEV V+ + Sbjct: 529 DFAGNTDPIKLLNPIASQMSVMRSSLIAGLVANARYNVNRKAARIRVFEVGAVFSKNAAV 588 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +G +A + G + ++ + R VD FD KAD +E + +LRF Sbjct: 589 ADGPLAVAGFDQPKRVAALAYGPVAEEQWGQASRNVDYFDVKAD----LEALFAPRTLRF 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ + E V+G GE HP + L FEV D++ Q++ Sbjct: 645 VKSEHPALHPGRTAQVLL-GEQVIGVIGELHPKWQQKYDLPLAPVVFEVDADAL---QQR 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII---KNVD---RLIDDVTVFDVFQ 754 T +S V RD+A +V Q + A L+++ K + +++ + +FD +Q Sbjct: 701 DLPT--YAEISKFPAVSRDIALVVKQSVGAQQLMDVFAAEKQANPACQILQALVLFDEYQ 758 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ L +KS+A + +Q ++T +DD + + M+ +V K A LR+ Sbjct: 759 GRGLESDEKSLAFRCTLQDTQNTLQDDKVDLAMNALVAAASAKLGARLRA 808 >gi|259908573|ref|YP_002648929.1| phenylalanyl-tRNA synthetase subunit beta [Erwinia pyrifoliae Ep1/96] gi|224964195|emb|CAX55702.1| Phenylalanyl-tRNA synthetase beta chain [Erwinia pyrifoliae Ep1/96] gi|283478542|emb|CAY74458.1| phenylalanyl-tRNA synthetase, beta subunit [Erwinia pyrifoliae DSM 12163] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + D +T GLEV+ VD A I +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSAALSDQITMAGLEVDGVDAVAGAFHGVVIGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S + I+ELP++A +G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISVEQDGIIELPLNATIGADMREYLQLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I+ P+++ ++P + +D C + VKGV P WM+++ Sbjct: 180 AVLNRLPLNEAVIA-PVAA-TLPDTLPIRVDAPQACPRYLGRVVKGVNVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD RI + VR+A GE + LD E L Sbjct: 238 LRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRQAEEGETLKLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGIIGG+++G T +VL E A + P++I + G+ TD+ Sbjct: 298 SSDTLVIADEQKALAMAGIIGGENSGVSPQTQNVLFECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + P++ I ++ RL Sbjct: 358 HRYERGVDPMLQYKAIERATRLLLDICGGAAGPVIDVTAEAALPQRSTITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + + IL RLG VI +++ PSWR D+ + DLVEE+ RI+G D I Sbjct: 418 GHVIADAEVSDILRRLGCDVIEGQGEWQAVAPSWRFDLSIEEDLVEEVARIFGYDNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + +LSL++ VK +L + E + +SF+ + G+ L Sbjct: 478 PVHAGLVMTRHREADLSLKR-----VKALLVDKGYQEAITYSFVDPKVQAQLHPGEANLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS +MS MR SL GLL A N +R + +FE + P+ Q + GIR Sbjct: 533 LPSPISVEMSAMRLSLWSGLLAAVAYNQNRQQSRVRLFESGLRF---VPDTQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G + ++EE VD +D K D SV+E LD +RF + A Sbjct: 588 Q---DVILAGVIAGHRNEEHWDLARDAVDFYDLKGDLESVLELTGKLDDIRFVAAANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + GL+ FE+ + ++ + V Sbjct: 645 HPGQSAGIYLHGEHI-GFIGVVHPELERKLGLNGRTVVFELLWNK--VADRVLPDASAV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA +V K V + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADIVTECKKVGANQVVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|237747672|ref|ZP_04578152.1| phenylalanyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] gi|229379034|gb|EEO29125.1| phenylalanyl-tRNA synthetase subunit beta [Oxalobacter formigenes OXCC13] Length = 809 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 258/829 (31%), Positives = 439/829 (52%), Gaps = 45/829 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F+ +WL+ ++ D++ +++ +T GLEVE + A PF+ + KVL V ++P+ Sbjct: 1 MQFSENWLRTLVNPDLTTDELSHLMTMSGLEVEGIT--PAARPFSKIVVAKVLEVAKHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D ++ ++D G + +VCGAPNVR G++ A G+ +P + K+RG+ Sbjct: 59 ADRLSVCQVDAGTGTILNIVCGAPNVRPGMMTGCALIGAELPTEEEGKAFTIKKGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + IM+LP +AP+G L DYL+L D I D+ LTPN++DC+ + Sbjct: 119 ESNGMLCSLRELQLSEDHSGIMDLPENAPLGMDLRDYLQLEDSIFDIKLTPNKADCLSLL 178 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A ++ A KL +S P S++ +P+++ + LC F+ +KG+ N Sbjct: 179 GVAREISALTGAKLNR-PVSEPAKVTSNDKLPVKV----EAPDLCGRFSGRVIKGINANA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM+QRL+ G RSISA+VDI+NYV L+ G P+H++D +I LT+R GEK+ Sbjct: 234 PTPEWMKQRLERSGQRSISAIVDISNYVMLEGGQPNHIYDLDKIDGGLTIRWGKKGEKVK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L++ ++ +IA + ++ + GI+GG +T ++ +EVA W P I + Sbjct: 294 LLNDMTVEVDEWVGIIADNTAVEFLGGIMGGDRTSVSSDTRNIYIEVAFWWPDAIRGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG--GTASDICIARNITYKPRK--I 404 TD+ +RFERGVD + L+ I +L+L +CG G + + I P++ + Sbjct: 354 RYNFSTDASHRFERGVDFNATVTALERITALVLEICGVEGETTVGPVDDQILSLPKRDPV 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 V + +++ GI + E I RLG S + + F V+ PS+R D+E + DL+EEI Sbjct: 414 VLRREKAEKVIGIPLSTEQIADIFTRLGLSFVQNGEDFTVTPPSYRFDIEIEEDLIEEIA 473 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVL 523 R+YG + I + P + V + + R+ + +++ +A EVVN+SF+ +E Sbjct: 474 RVYGFENIPALPPVASNV---MRIKPENMRSLFSIRQQMADLDYQEVVNYSFVEEEWEKD 530 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE 582 F + +LNPI++ MS MR++++ L+ N++R + +FE+ V+ ND E Sbjct: 531 FAANDNPIRLLNPIASQMSVMRSTMIGNLVANVRFNLNRKFSRIRLFEIGGVFLRNDKVE 590 Query: 583 GQKYMAAGIRKGSS-GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 AG + G + ++ + R VD FD KAD ++ P +RF Sbjct: 591 NGPLSVAGYEQPKRLAAIAYGLVDEEQWGQEDRQVDFFDVKADLEAMFAP----KEVRFS 646 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + +HPGR ++ + V G GE HP+ + L + FEV IS + Sbjct: 647 KASHPAFHPGRCAALEVDGQKV-GILGELHPSWQHKYDLPHAPVLFEV-----DISALQT 700 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVD-----RLIDDVTVFDVFQG 755 +S PV RD+A +VD +P +++ K D ++ + +FD ++G Sbjct: 701 VDVPVYTEISRFQPVIRDIALVVDSSMPVQEIIDRFYKEKDNNPLCNIMQAIVLFDDYRG 760 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K L +KS+A ++ +Q + T +D+ + ++ +V V K A LR+ Sbjct: 761 KGLDANEKSLAFRITLQDINGTLQDEVVETAVNALVSAVEKDLGARLRA 809 >gi|188533972|ref|YP_001907769.1| phenylalanyl-tRNA synthetase subunit beta [Erwinia tasmaniensis Et1/99] gi|188029014|emb|CAO96882.1| Phenylalanyl-tRNA synthetase beta chain [Erwinia tasmaniensis Et1/99] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 269/816 (32%), Positives = 425/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF WL++ ++ + + D +T GLEV+ VD A + +V+ ++P+ D Sbjct: 1 MKFNELWLREWVNPAIDSTALSDQITMAGLEVDGVDAVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGALLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S + I+ELP DA VG + +YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISVEQDGIIELPQDASVGTDIREYLQLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E++I P+++ ++P +D C + VKGV N P WM+++ Sbjct: 180 AVLNRLPLNEVDIQ-PVTA-TLPDTFPIRVDAPQACPRYLGRVVKGVNVNADTPLWMQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNYV L+ G P H FD RI + VR+A GE + LD E + Sbjct: 238 LRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRIDGGIVVRQAEEGETLKLLDGNEARM 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + ++AGI GG+ +G + T +VL+E A + P++I + G+ TD+ Sbjct: 298 SSDTLVIADSKKALAMAGIFGGEDSGVNPQTQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDSALQYKAIERATRLLLDICGGAAGPVIDVTDQAALPQRSTITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + D IL RLG V E K+ PSWR D+ + DLVEE+ RIYG D I Sbjct: 418 GHVIADADVSDILCRLGCEVTEEEGKWHAVAPSWRFDISIEEDLVEEVARIYGYDNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V K +LSL++ VK +L + E + +SF+ + L G+ L Sbjct: 478 PVQAGLVMTKHREADLSLKR-----VKALLVDKGYQEAITYSFVDPKIQALLHPGEENLI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS +MS MR SL GLL A N +R + +FE + P+ Q + GIR Sbjct: 533 LPSPISVEMSAMRLSLWSGLLGAVAYNQNRQQSRVRLFESGLRF---VPDTQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + SG + ++EE VD +D K D SV+E LD +RF + A Sbjct: 588 Q---EVMLSGVIAGHRNEEHWELARDAVDFYDLKGDLESVLELTGKLDDIRFVATANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S + E + G+ G HP + L+ FE+ + ++ + V Sbjct: 645 HPGQSAGVYLHDEHI-GFIGVVHPELERKLDLNGRTVVFELLWNK--VADRILPDANPV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA ++ K V I V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADIITECKKVGANQIVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|260597642|ref|YP_003210213.1| phenylalanyl-tRNA synthetase subunit beta [Cronobacter turicensis z3032] gi|260216819|emb|CBA30306.1| Phenylalanyl-tRNA synthetase beta chain [Cronobacter turicensis z3032] Length = 795 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 268/816 (32%), Positives = 430/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSEALANQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGADIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L +I+ ++ + L I+ D D+ C + VKG+ P WMR++ Sbjct: 180 AVLNAEPLNAPDIAPVAATINDTLPIQVDAADA--CPRYLGRVVKGIDVTAPTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGETLTLLDGNEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G + T +VL+E A + P+ I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNGETRNVLLECAFFAPLAITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD Q ++ L+L +CGG A + T+ P + I S++ RL Sbjct: 358 HRYERGVDPQLQYKAMERATRLLLDICGGEAGPVIDVTRETHLPTRETITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL RLG V D+++ PSWR D+ + DLVEE+ R+YG D I +E Sbjct: 418 GHHIADAQVTDILTRLGCDVTAGQDEWQAIAPSWRFDIAIEEDLVEEVARVYGYDNIPNE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + V + LSL++ VK +L EV+ +SF+ + L G+ L Sbjct: 478 PVQASLVMGTHREAELSLKR-----VKMLLNDHGFQEVITYSFVDPKVQQLLHPGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + +PIS++MS MR SLL GLL N +R + IFE + P+ Q + GIR Sbjct: 533 LPSPISSEMSAMRLSLLTGLLTTVVYNQNRQQSRVRIFEAGLRF---VPDTQADL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G L ++ EE VD +D K SV+E L + F + A Sbjct: 588 Q---DLMLAGALCGNRYEEHWDLAKGGVDFYDLKGTLESVLELTGKLSEIEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ +S++ + ++V Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELLWSK--VSERALPQAQEV- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVSENVPAADILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +D+I + + V + ++ A LR Sbjct: 759 SLILQDTGRTLEEDEIAATVAKCVTALKERFQASLR 794 >gi|260914042|ref|ZP_05920515.1| phenylalanyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] gi|260631675|gb|EEX49853.1| phenylalanyl-tRNA synthetase [Pasteurella dagmatis ATCC 43325] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 258/818 (31%), Positives = 438/818 (53%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSELWVREWVNPAISTEQLCDQITMLGLEVDSVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGAERLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S+ I+ELP DAP+G L +YL+L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVESSGIIELPQDAPIGTNLREYLKLDDNAIEISLTPNRADCLSMAGIAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + ++ + P +I +++ L C + + VK V N +P WM Sbjct: 180 -----GVVNKLAVKAPHFEPVKATIADKVEIQLQAPEACPRYLLRVVKNVNVNAQSPMWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNY+ L+ G P H FDA+++++ + VR A E+++ LD Sbjct: 235 QEKLRRCGIRSIDPVVDITNYILLELGQPMHAFDAAKVAEPIQVRMAKESEELVLLDGST 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + ++IA +IAGI GG+ +G + T DV++E A + P+ IA + G+ T Sbjct: 295 AKLKENTLLIADQNGPLAIAGIFGGEASGVNTETKDVILEAAFFAPLAIAGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 DS +RFERGVD + ++ +L++ +CGG A +IC ++ + P+ ++ ++ Sbjct: 355 DSSHRFERGVDFELQHKAMERATALLVEICGGEAGEICEVKSDKFLPKLNQVKLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E I +RLG V D + V+ SWR D+ + DL+EE+ RIYG + I Sbjct: 415 ALLGHHIETETVTEIFQRLGLDVSYANDIWTVTSASWRFDINIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 475 PNNAPLAHLRMREHKEADLDLAR---IKTALVDADYQEAITYSFVDPKVQGLLHPQQEAF 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 + NPIS +MS MR SLL GLL A N +R +FE + D+ Q+++ Sbjct: 532 VLPNPISVEMSAMRLSLLSGLLGAVQYNQNRQQTRVRLFETGLRFVPDSNAEFGVRQEFV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + + G+ E W+ KSE VD FD K D S++ + + ++F + + S Sbjct: 592 LSAVITGAKKSEH----WTGKSEN----VDFFDLKGDLESILSLTGTGNLVKFVAKSYSA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I + E + G+ G HP + GL+ FE+ + I+ + + K++ Sbjct: 644 LHPGQSAAILLNGEEI-GFIGTIHPKVAQQLGLNGKAIVFEILWSA--IANRNIVQAKEI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 S +RDLA +V + A +++ + V D+L V +FDV+QG + E KS+ Sbjct: 701 ---SRFPANRRDLAVVVANDVAASDIIDTCREVAGDKLT-QVNLFDVYQGNGVAENHKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI ++IQ + T +DDI ++ ++ + ++ NA LR Sbjct: 757 AISLVIQDTEKTLEEDDINAVVSVVLSELKQRFNAYLR 794 >gi|187924727|ref|YP_001896369.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia phytofirmans PsJN] gi|187715921|gb|ACD17145.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia phytofirmans PsJN] Length = 811 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 276/838 (32%), Positives = 433/838 (51%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ ++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTNELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENN--MIVNVRK 108 D + ++D G + +VCGAPNV V L+G PP E + + K Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D + ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + V G+A + A L+ + I P+ +E++P++I LC F+ ++GV Sbjct: 176 LSVFGVARETSAITGAPLRPLEIK-PVEVKLNETLPVKIS----APDLCGRFSGRVIRGV 230 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 + +P+WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR G Sbjct: 231 NAHAKSPHWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKG 290 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + L+ +L VIA + I+S+AGI+GG +TT++ +E A W P +I Sbjct: 291 ETLKLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIR 350 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + TD+ +RFERGVD + ++ I LIL +CGG A + + + R+ Sbjct: 351 GRSRKYNFSTDAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVD-DQIVNVPKREP 409 Query: 405 VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 V M S R+ GI + ++ +I RLG S D F V PS+R D+E + DL+EE+ Sbjct: 410 VKMRVSRANRIIGIKIDADEIAQIFTRLGLSFERSEDTFSVMPPSYRFDIEIEEDLIEEV 469 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E Sbjct: 470 ARIYGFEKIPARP-PVATSEMRATNETQRS-IHVIRHALAARDYAETVNFSFVDAEWEQD 527 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYENDT-- 580 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 528 FAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLHDPSI 587 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 G+ + + G G ++ R VD FD K D +V+ P V+ RF Sbjct: 588 KAGELTVEGFAQPKMIGALAYGPALEEQWGAATRTVDYFDVKGDLEAVLAPAVA----RF 643 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IP 695 HPGRS I+ + V G+ GE HP + + L FE+ ++ +P Sbjct: 644 VKAEHPALHPGRSARIELNGRAV-GWIGELHPRWMQKYDLPLAPILFEIEAEALMQRVLP 702 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RLIDDVTVF 750 I + +S PV+RD+A +VDQ I A L++ ++ + + V +F Sbjct: 703 IPSE----------VSKFQPVRRDIAVVVDQKIEAQALLDELQKAQSEPACKTVQKVVLF 752 Query: 751 DVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D F+ KS LG +KS+A +V +Q T +D+ + + + +VE + + A LR Sbjct: 753 DEFRPKSNTSGGLGAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVYGARLR 810 >gi|59711843|ref|YP_204619.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio fischeri ES114] gi|66773826|sp|Q5E5G5|SYFB_VIBF1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|59479944|gb|AAW85731.1| phenylalanine tRNA synthetase, beta subunit [Vibrio fischeri ES114] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 420/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDEV--APVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P N + K+RG+ S G Sbjct: 59 ADKLRVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GNFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + D LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESEGILELPEGTTLGADVRDILELNDVAIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E I+ +S +++ +E+K + C + +K V P W Sbjct: 178 EVGVLNRADVTEPTIAAVATSIEDAVSIEVKA----TEACPRYLGRVIKNVNAKAETPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI A+VDITNYV L++G P H FD ++I + VR A EK+ LD Sbjct: 234 MQEKLRRCGIRSIDAIVDITNYVMLEQGQPMHAFDLAKIDGGIVVRMAEQDEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L+ + +VIA + +IAGI GG+ +G TTD+++E A + P +I + G+ Sbjct: 294 EAKLNDNTLVIADQNKALAIAGIFGGQESGVTSETTDIMLECAFFAPDHIRGRARAYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ LCGG + + + P+ + S++ Sbjct: 354 TDSSLRFERGVDSTLQAAAMERATQLLVELCGGEVAPVVAVESEADLPKANTVELRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G +P D + IL RLG +V + S PSWR D+ + DL+EE+ RIYG + Sbjct: 414 DGLLGHHIPSTDVVEILTRLGCAVESTDTGWTASSPSWRFDIAIEQDLIEEVGRIYGYNN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P+ + D + + R V+ +L R E + +SF+ EQ L Sbjct: 474 IPNQAPVAALNMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLIVPEIEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + PISA+MS MR SL GL+ N R +FE + + E G Q+ Sbjct: 531 LILPFPISAEMSAMRLSLWTGLINTVVHNQKRQQPRVRLFESGLRFIPEESAENGMRQEM 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AGI G+ G E W + VD FD K D +V+E + + F++ Sbjct: 591 MLAGIIAGTRGEEH----WDIAT----NTVDFFDLKGDLEAVLELTANELAYEFKAAKHP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I + V G+ G HP + FGL+ FE+ D+I + Sbjct: 643 ALHPGQTAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIMFEIEWDAI-----NTRVIPE 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A + D+ I +G +V + + L+ +FDV++G+ + EGKKS+ Sbjct: 697 AASVSKFPANRRDIAIVADEAIASGDIVAECLASGGELLTSAKLFDVYRGQGVEEGKKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q ++ T + DI +D IV + +K +A LR Sbjct: 757 AIALTLQSVERTLEEADITSAVDAIVAAIGEKFSATLR 794 >gi|197335686|ref|YP_002156040.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] gi|197317176|gb|ACH66623.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio fischeri MJ11] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 266/818 (32%), Positives = 420/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDEV--APVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P N + K+RG+ S G Sbjct: 59 ADKLRVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GNFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + D LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESEGILELPEGTTLGADVRDILELNDVAIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E I+ +S +++ +E+K + C + +K V P W Sbjct: 178 EVGVLNRADVTEPTIAAVAASIEDAVSIEVKA----TEACPRYLGRVIKNVNAKAETPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI A+VDITNYV L++G P H FD ++I + VR A EK+ LD Sbjct: 234 MQEKLRRCGIRSIDAIVDITNYVMLEQGQPMHAFDLAKIDGGIVVRMAEQDEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L+ + +VIA + +IAGI GG+ +G TTD+++E A + P +I + G+ Sbjct: 294 EAKLNDNTLVIADQNKALAIAGIFGGQESGVTSETTDIMLECAFFAPDHIRGRARAYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ LCGG + + + P+ + S++ Sbjct: 354 TDSSLRFERGVDSTLQAAAMERATQLLVELCGGEVAPVVAVESEADLPKANTVELRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G +P D + IL RLG +V + S PSWR D+ + DL+EE+ RIYG + Sbjct: 414 DGLLGHHIPSTDVVEILTRLGCAVESTDTGWTASSPSWRFDIAIEQDLIEEVGRIYGYNN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P+ + D + + R V+ +L R E + +SF+ EQ L Sbjct: 474 IPNQAPVAALNMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLIVPEIEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + PISA+MS MR SL GL+ N R +FE + + E G Q+ Sbjct: 531 LILPFPISAEMSAMRLSLWTGLINTVVHNQKRQQPRVRLFESGLRFIPEESAENGMRQEM 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AGI G+ G E W + VD FD K D +V+E + + F++ Sbjct: 591 MLAGIIAGTRGEEH----WDIAT----NTVDFFDLKGDLEAVLELTANELAYEFKAAKHP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I + V G+ G HP + FGL+ FE+ D+I + Sbjct: 643 ALHPGQTAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIMFEIEWDAI-----NTRVIPE 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A + D+ I +G +V + + L+ +FDV++G+ + EGKKS+ Sbjct: 697 AASVSKFPANRRDIAIVADEAIASGDIVAECLASGGELLTSAKLFDVYRGQGVEEGKKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q ++ T + DI +D IV + +K +A LR Sbjct: 757 AIALTLQSVERTLEEADITSAVDAIVAAIGEKFSATLR 794 >gi|333004253|gb|EGK23784.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri K-218] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 431/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 +R+ERGVD PVL+H L++ +CGG A + N P++ I S+ Sbjct: 358 HRYERGVD-----PVLQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + Sbjct: 413 LDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYN 472 Query: 471 QIKSEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I EP+ + + + +LSL++ VK +L + EV+ +SF+ + + G Sbjct: 473 NIPDEPVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG-- 583 L + +PIS +MS MR SL GLL N R IFE + DT P G Sbjct: 528 VEALLLASPISVEMSAMRLSLWTGLLATVVYNQHRQQNRVRIFESGLRFVPDTQAPLGIR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ G+ E W+ E VD +D K D SV++ L+ + F + Sbjct: 588 QDLMLAGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 640 ANPALHPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG Sbjct: 699 -----EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|332534257|ref|ZP_08410102.1| phenylalanyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] gi|332036337|gb|EGI72808.1| phenylalanyl-tRNA synthetase beta chain [Pseudoalteromonas haloplanktis ANT/505] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 252/817 (30%), Positives = 438/817 (53%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + L+ GLEV+ V+ A + + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPAIDTQALSEQLSMAGLEVDGVEPAAAKFNGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL +S++ IMELP DAPVG L DYL L D IIDV LTPNR DC+G++G+A ++ Sbjct: 120 CAFVELGISEEGDGIMELPSDAPVGTDLRDYLGLDDNIIDVDLTPNRGDCLGIKGLAREV 179 Query: 179 VAAGLGKLKEINISC---PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L I+++ P + +I ++ +L + C + +KG+ + P WM Sbjct: 180 -----GVLNSIDVNVLDIPAVTPTIDDKVSIELVNEDACPRYLGRVIKGINLDAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VD+TNYV L+ G+P H FD + I + VR A +GE+++ LD Sbjct: 235 VEKLRRSGVRSIDPVVDVTNYVLLELGHPMHAFDLNAIEGGIKVRSANAGEELVLLDGNT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +VIA + +IAGI GG+ +G D T+D+L+E A ++P+ IA ++ G+ T Sbjct: 295 AKLNDTTLVIADHNKALAIAGIFGGEQSGVTDKTSDILLESAFFNPVAIAGQARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ +L+L + GG A + +A + K ++ + + Sbjct: 355 DASHRYERGVDFALQHDAMERATALLLEIVGGQAGPVVEAVAADKLPKVTEVRLRRARLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + IL RLG V E + + VPS+R D+ + DL+EE+ R+YG + I Sbjct: 415 RVIGHHIEDAKVTDILTRLGLDVKVENESWSADVPSYRFDIRIEEDLIEEVARVYGYNSI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P ++ ++ S+ R L +R E + +SF+ + + + + Sbjct: 475 PNVAPTAKLKMTTHNEATIALSKFR---NTLVTRGYQEAITYSFVDPKAQAILHPECKAM 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAG 590 + +PIS +MS MR SL+PGLL + N +R +FE + +D + E Y Sbjct: 532 VLPHPISIEMSAMRVSLMPGLLASVAYNQNRQQPRIRLFEHGLKFISDESAENGVYQVPV 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WY 648 I +G+ +G W E R VD +D K D +++ ++ D RFE A Sbjct: 592 IGGVITGLV-NGEHWV----EEKRNVDFYDLKGDVEALLA--ITNDITRFEIKAEQSDGL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S +I + V G+FG HP ++N FE+ + +I ++ + Sbjct: 645 HPGQSAVIYVDGKKV-GFFGALHPQAQKSLDINNATFVFEIEMSAI-----EKRNLPQAE 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V + +G ++++I+ V ++L+ D+ +FDV++GK + KS+A Sbjct: 699 GVSKFPSNRRDIAILVADSVKSGDILSVIEKVGGNQLV-DLNLFDVYKGKGIEPNYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I + +Q + T + DI +++D +V + ++ NA LR Sbjct: 758 IALTLQAVDRTLEEKDINLVVDNVVAELAEQFNASLR 794 >gi|238783380|ref|ZP_04627403.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia bercovieri ATCC 43970] gi|238715625|gb|EEQ07614.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia bercovieri ATCC 43970] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 420/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ V++ + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALAHQITMAGLEVDGVESVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAANCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISEDHDGIIELPADAPIGVDVREYLKLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L E ++S ++S +S P+ + D C + VKG+ A P WM Sbjct: 180 AVVNQLPLTEPDMSPVVASINDSFPIRV----DAPQACPRYLGRVVKGINVKAATPLWMC 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VD+TN+V L+ G P H FD RI + VR A GE++ LD + Sbjct: 236 EKLRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRIDGGIVVRLAAEGEELTLLDGTKA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD Sbjct: 296 KLNADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 + +R+ERGVD ++ L++ +CGG A + P++ I ++ R Sbjct: 356 ASHRYERGVDPALQHKAIERATRLLIDICGGEAGPVIDVTATEALPKRATITLRREKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G VP IL RLG V + PSWR D+E + DLVEE+ RIYG + I Sbjct: 416 LIGHQVPSAQVSDILRRLGCQVTELGTDWLAVAPSWRFDMEIEEDLVEEVARIYGYNNIP 475 Query: 474 SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V K R L R VK L R E + +SF+ + L Q L Sbjct: 476 DVPVKADLVMTKHREADLPLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS DMS MR SLL GLL A N +R + +FE + DT Q M Sbjct: 533 LPSPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDTKADLGVRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ +G + + + + +D +D K D +++E L ++F + + Sbjct: 593 AGVI--------AGHRYEEHWDLVRQPIDFYDLKGDLEAILELTGKLSDVQFRAESHPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I S E + G+ G HP + L+ FEV + + + Sbjct: 645 HPGQSAAIYLSGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKL-----ADRAVPQAS 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + R VE + ++ A LR Sbjct: 759 SLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 794 >gi|333003775|gb|EGK23311.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri VA-6] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 432/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRIAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 +R+ERGVD PVL+H L++ +CGG A + N P++ I S+ Sbjct: 358 HRYERGVD-----PVLQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + Sbjct: 413 LDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYN 472 Query: 471 QIKSEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I EP+ + + + +LSL++ VK +L + EV+ +SF+ + + G Sbjct: 473 NIPDEPVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG-- 583 L + +PIS +MS MR SL GLL N +R IFE + DT P G Sbjct: 528 VEALLLASPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ G+ E W+ E VD +D K D SV++ L+ + F + Sbjct: 588 QDLMLAGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 640 ANPALHPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG Sbjct: 699 -----EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|322514395|ref|ZP_08067441.1| phenylalanyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] gi|322119711|gb|EFX91761.1| phenylalanyl-tRNA synthetase beta subunit [Actinobacillus ureae ATCC 25976] Length = 795 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 269/822 (32%), Positives = 430/822 (52%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ VS E++CD +T +GLEV+ V+ A + + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAVSTEQLCDQITMLGLEVDAVELVAGAFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGALNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL+L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGKDFREYLDLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G + + + P+ S +I ++ +L C + VK V A P W+ Sbjct: 180 -----GVINRVEVKSPVISAVPATIADKVAIELQAPEACPRYLARIVKNVNVKAASPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDAS+I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDASKIEGAIQVRMAKEGEELVLLDGTT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P+ +VIA ++AGI GG+ +G ++NTTDV++E A + P+ I + G+ T Sbjct: 295 AKLQPNTLVIADSKAALAMAGIFGGEASGVNENTTDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD Q ++ +L+L +CGG A +I A + + P + + S++ Sbjct: 355 DASHRFERGVDPQLARDAMERATALLLEICGGEAGEIVEAVSEQHLPVRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + E IL RLG +V D + PSWR D+E + DL+EE+ RIYG + I Sbjct: 415 AVIGHHIENETVTDILTRLGLNVTFTNDSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ SR R L EVV +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEASRIRT---ALVDSDYQEVVTYSFVDPKKQSLLHPNQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D +G+ Sbjct: 532 ILPNPISSEMSAMRLSLLTGLLDTIVYNQSRQQTRVRIFEGGLRFIPDA-----TAESGV 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 R+ + I G R W K E VD FD K D V+ + L+F + Sbjct: 587 RQEFVFGAAIVGDKRPVHWESKDE----VVDFFDLKGDMERVLSLTSARHDLKFVAKQFP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTK 703 HPG+S I + + G+ G HP+I+ G+ FE+ ++I PI K Sbjct: 643 ALHPGQSAAIMLDGKEI-GFIGSVHPSIVQKLGIKGKPVVFEILGEAIANRPIPAAK--- 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEG 761 +S RD+A +VD+++ AG +++ +N +L+ V +FDV+ G +L G Sbjct: 699 -----EISKFPANNRDIAVVVDENVAAGDVLDACRNAGGSKLV-AVNLFDVYHGTNLEAG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI + +Q + T +++I + ++ + ++ A LR Sbjct: 753 KKSLAISLTVQDTEKTLEEEEISAVTQAVLAELAQRFQAYLR 794 >gi|209695217|ref|YP_002263146.1| phenylalanyl-tRNA synthetase subunit beta [Aliivibrio salmonicida LFI1238] gi|208009169|emb|CAQ79417.1| phenylalanyl-tRNA synthetase beta chain [Aliivibrio salmonicida LFI1238] Length = 795 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 269/821 (32%), Positives = 423/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDEV--APVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P + + K+RG+ S G Sbjct: 59 ADKLRVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GDFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP + +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGSTLGMDVRELLELNDVAIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI + D+ + C + +K V P Sbjct: 178 EV-----GVLNRADVTEPTIEAVATSIEDTVSIDIKATEACPRYLGRVIKNVNAKAETPI 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI A+VDITNYV L++G P H FD S+I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDAIVDITNYVMLEQGQPMHAFDLSKIDGGIVVRMAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ + +VIA + +IAGI GGK +G TTD+++E A + P +I + G+ Sbjct: 293 NEAKLNSNTLVIADQNKALAIAGIFGGKESGVTSETTDIMLECAFFAPDHIRGRARAYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS RFERGVD ++ L++ LCGG + I A + P++ + S+ Sbjct: 353 HTDSSLRFERGVDSTLQATAMERATQLLVELCGGEVAPISAAESEADLPKESTVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G +P D + IL RLG V + + PSWR D+ + DL+EE+ RIYG + Sbjct: 413 LDGLLGHHIPSTDVVEILTRLGCVVETTDTGWTATSPSWRFDIAIEQDLIEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L + + +KRV L R E + +SF+ EQ L Sbjct: 473 NIPNQA-PVAAL----NMNLHKEANQPLKRVRDLLVDRGYHEAITYSFVEPEQQKLIVPE 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG-- 583 L + PISADMS MR SL GL+ N R +FE + + E G Sbjct: 528 IEPLILPFPISADMSAMRLSLWTGLINTVVHNQKRQQPRVRLFESGLRFIPEESAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AGI G+ G E W + VD FD K D +V+E + + F++ Sbjct: 588 QEMMLAGIIAGTRGEEH----WDIAT----NTVDFFDLKGDLEAVLELTANELAYEFKAA 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I + V G+ G HP + FGL+ FE+ D+I Sbjct: 640 QHPALHPGQTAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIMFEIEWDAI-----NTRV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 + +S +RD+A + D+ I +G +V + + L+ +FDV++G+ + + K Sbjct: 694 IPEAAAVSKFPANRRDIAIVADEAIASGDIVAECLASGGELLTSAKLFDVYRGQGVEDDK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + DI +D IV + +K +A LR Sbjct: 754 KSLAIALTLQSVERTLEEADITSAVDAIVAAIGEKFSATLR 794 >gi|238895230|ref|YP_002919965.1| phenylalanyl-tRNA synthetase subunit beta [Klebsiella pneumoniae NTUH-K2044] gi|330009680|ref|ZP_08306554.1| phenylalanine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] gi|238547547|dbj|BAH63898.1| phenylalanyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] gi|328534768|gb|EGF61324.1| phenylalanine--tRNA ligase, beta subunit [Klebsiella sp. MS 92-3] Length = 795 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 263/817 (32%), Positives = 428/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKRL 414 +R+ERGVD L+ L++ LCGG A D+ N+ + I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTSKENLPTRA-TITLRRSKLDRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + IL+RLG V +++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 417 IGHHIADAQVTDILQRLGCEVTVGEGEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPD 476 Query: 475 EPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 EP+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 477 EPVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQLIHAGEEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYM 587 + +PIS++MS MR SL GLL N +R + IFE + V + + P G Q M Sbjct: 532 ILPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTNAPLGIRQDVM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG G+ E W+ E VD +D K D +V++ L + F + A + Sbjct: 592 LAGAICGNRYEEH----WTLAKET----VDFYDLKGDLEAVLDLTGKLADIEFRAEATTA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 644 LHPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR---- 698 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+A Sbjct: 699 -DISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +++I + R VE + ++ A LR Sbjct: 758 ISLILQDTSRTLEEEEIAATVARCVEALKERFQASLR 794 >gi|145589019|ref|YP_001155616.1| phenylalanyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047425|gb|ABP34052.1| phenylalanyl-tRNA synthetase beta subunit [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 818 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 283/847 (33%), Positives = 445/847 (52%), Gaps = 73/847 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ SWL+ +++ + + + +T GLEVE+ + A + I ++LS E++PD D Sbjct: 1 MQFSESWLRQYVNPSLDSDALGHAMTMAGLEVEEQHSFAPAFTKIVIAQILSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G QE+Q+VCGAPN R G ++G PP + MI V K+RG+ Sbjct: 61 RLRVCKVDAGTGQELQIVCGAPNARAGIKIPCAMVGAELPPAEAGGKPFMI-KVGKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL L DD I+ELP DAPVG + +YL+L D I + LTPN++DC+ + Sbjct: 120 ESQGMLCSGRELGLGDDHEGILELPQDAPVGKDIREYLDLDDQIFVIKLTPNKADCLSLL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 G+A ++ A L S P +++I ++K ++++ LC FA ++GV P Sbjct: 180 GMAREVSAITGADLCAPKWSVP--AKAIDEKLKVTVENTDLCGRFAGRVIRGVNPQAKTP 237 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+ +RL G RSISALVD++NYV L+ G P+HVFD +++ +TVR A GE + L+ Sbjct: 238 EWIVKRLSRAGQRSISALVDLSNYVMLEMGQPTHVFDIDKLNGDITVRWAKVGETLELLN 297 Query: 292 NQEYDLS-PDNV-------VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 Q L PD+ V+A ++AGI+GG H D+T ++ VE A W P I Sbjct: 298 GQTVTLQGPDSAGKLQDAGVVADQSGPVALAGIMGGNHCAVSDDTKNIYVEAAYWLPSAI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + TD+ +RFERGVD Q + L+++ SLI+ +CGG A I + + RK Sbjct: 358 QGRARRFNFSTDAAHRFERGVDPQNTVNCLEYLSSLIIEVCGGQAGPID-DQILNVPERK 416 Query: 404 IVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 V M + +++ GI + E + +RLGF E D F V+ PS+R D+E + DL+EE Sbjct: 417 PVRMRLTRAQKVIGIPLTNEIVADVFKRLGFEFKQEGDAFIVTPPSYRFDIEIEEDLIEE 476 Query: 463 ILRIYGVDQIKSEPLPL------TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 + R+YG + I +P P+ + E KR + L + R LA + E VN+ F Sbjct: 477 VARMYGFENIPDQP-PVASLKMSAKAEAKRGIHLLRQR-------LALQGYQEAVNFGFT 528 Query: 517 SKE-QSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 E + L G +++ + +LNPI+ MR++L GLL N++R +FE Sbjct: 529 DLESERRLMGVSEKDVIAVLNPIANQYGVMRSTLWGGLLTNLKANLNRGAGRVRLFETGR 588 Query: 575 VYENDT--PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP- 631 V+ D E +A + G G ++ R VD FD K D V++P Sbjct: 589 VFNRDANVQEEASKVAGYNQPQKIGGLAYGSFVPEQWANATRAVDFFDVKGDLERVLDPL 648 Query: 632 -FVSLDSLRFESGAPSWYHPGRSG-IIKTSAE--IVLGYFGEFHPNILDFFGLSNPICGF 687 FV+ E+ HPGRS I T+A+ + +G+ GE HP + + L F Sbjct: 649 HFVT------EAAQHPALHPGRSAKIFLTTAKNRVEVGFIGELHPGLQQAYELPQAPVLF 702 Query: 688 EVYLDSI-----PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD I P+ ++ LS V+RDLA +V Q++ A +L++ + Sbjct: 703 ELELDPIRELGLPVPEE----------LSKFPAVQRDLAVVVKQNVSAQSLLDAMSATKQ 752 Query: 742 RLIDDVTVFDVFQGK----SLGEGKKSVAIQV-LIQPLKDTFRDDDIRILMDRIVENVVK 796 + + + +FD F+ K S+ + +KS+A +V L+ P+ +T +D I +M ++ V K Sbjct: 753 QFVRGIELFDEFKPKAGSSSMADDEKSLAFRVTLLNPV-ETLQDPQIDAVMASLLGAVEK 811 Query: 797 KTNAVLR 803 K A LR Sbjct: 812 KCAARLR 818 >gi|331663193|ref|ZP_08364103.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA143] gi|284921634|emb|CBG34706.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli 042] gi|331058992|gb|EGI30969.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA143] Length = 795 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 430/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDISNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A + Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANAAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|333006575|gb|EGK26075.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri K-272] gi|333018794|gb|EGK38087.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella flexneri K-227] Length = 795 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LASPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|213160964|ref|ZP_03346674.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] Length = 789 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 262/812 (32%), Positives = 427/812 (52%), Gaps = 39/812 (4%) Query: 7 WLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAILR 64 WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D + + Sbjct: 1 WLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNADKLRVTK 60 Query: 65 IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL 124 ++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+CS EL Sbjct: 61 VNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGMLCSFSEL 119 Query: 125 MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 GISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNKA 179 Query: 185 KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGL 243 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++L+ G+ Sbjct: 180 PLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINVNAPTPLWMKEKLRRCGI 237 Query: 244 RSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVV 303 RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L+ D +V Sbjct: 238 RSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNADTLV 297 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 IA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ +R+ERG Sbjct: 298 IADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRYERG 357 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPI 421 VD ++ L+L +CGG A I N P++ I S++ RL G + Sbjct: 358 VDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLIGHHIAD 417 Query: 422 EDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP--- 478 E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I EP+ Sbjct: 418 EQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGL 477 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + +LSL++ VK +L + EV+ +SF+ + L G L + NPIS Sbjct: 478 IMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPIS 532 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAGIRKG 594 +MS MR SL GLL N +R IFE + DT Q M AG+ G Sbjct: 533 VEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICG 592 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 + E W+ E VD +D K D +V++ L ++F++ HPG+S Sbjct: 593 NRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSA 644 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKKVVHLSS 712 I E + G+ G HP + L+ FE+ + + I + R +S Sbjct: 645 AIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR-------EISR 696 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI +++ Sbjct: 697 FPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLIL 756 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q T +++I + + VE + ++ A LR Sbjct: 757 QDTNRTLEEEEIAATVAKCVEALKERFQASLR 788 >gi|167034472|ref|YP_001669703.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas putida GB-1] gi|166860960|gb|ABY99367.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudomonas putida GB-1] Length = 793 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 261/825 (31%), Positives = 432/825 (52%), Gaps = 55/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + T + QVVCGAPN R G+ +A G+ + + + K+RG+ES GM+C Sbjct: 61 KLRVCQVTNGQETFQVVCGAPNARPGIKIPFAMIGAEL-SGDFKIKKAKLRGVESFGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 120 SAAELEISEENDGLLELAADAPVGEDIRKYLSLDDASIEIGLTPNRGDCLSIAGLARDVS 179 Query: 180 AAGLGKLKEINISCPL-------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAP 231 A L + ++ P+ E P+E+ + C + ++ V + P Sbjct: 180 A-----LYDTPVTRPVVPAVAAAHDEVRPVEVSA----PAACPRYLGRVIRNVDLSKPTP 230 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Sbjct: 231 LWMVERLRRSDVRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLLD 290 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNL 350 QE L D +VIA R +IAG++GG+H+G + + T D+ +E A ++PI++A ++ Sbjct: 291 GQEVALRADTLVIADHTRALAIAGVMGGEHSGVNTEKTRDLFLESAFFEPISVAGKARSY 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A I A + + P+ + Sbjct: 351 GLHTDASHRYERGVDSQLAREAMERATQLLLDIVGGEAGPIVEAVSEQHLPQVAPVTLRA 410 Query: 409 SEVKRLSGIDV---PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + ++ G+++ +E L LE L + GE ++ V+VPS R D+ + DL+EE+ R Sbjct: 411 ERITQMLGMEMDPAQVEQLLNALE-LTTTRNGE-GQWTVNVPSHRFDISLEVDLIEELAR 468 Query: 466 IYGVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 +YG + + ++ P + E + +L ++R+L +R E + +SFI + Sbjct: 469 LYGYNNLPVRYPQARLAPQGKPETRGDLP-------TLRRLLVARGYQEAITYSFIDPKL 521 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 LF G L + NPIS+DM+ MR SL PGL+KA N++R +FE + Sbjct: 522 FELFSPGVEPLLLANPISSDMAAMRASLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQL 581 Query: 581 PE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 + Q+ M AG+ GS EG W++ + VD FD KAD +++ +L Sbjct: 582 GDLQQQPMIAGVITGSRLPEG----WANGRDG----VDFFDVKADVEALLGYSGALSDFT 633 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 F +G HPG++ I+ ++V GY G HP + L P+ FE+ L + Sbjct: 634 FSAGKHPALHPGQTAAIERDGKLV-GYLGAIHPELAKALDLDRPVFLFELVLGDV----- 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 + K LS +RDLA I + + + ++ +I+ N + D+ +FDV+QGK + Sbjct: 688 VEGRLPKFSELSKFPETRRDLALIAGRDVASSAVLELIRDNAGEWLTDLRLFDVYQGKGI 747 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ + I+ ++ ++ N LR Sbjct: 748 DPDRKSLAVGLTWQHPSRTLNDDEVNTTLQNILTSLEQRLNTTLR 792 >gi|290509031|ref|ZP_06548402.1| phenylalanyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] gi|289778425|gb|EFD86422.1| phenylalanyl-tRNA synthetase, beta subunit [Klebsiella sp. 1_1_55] Length = 795 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 264/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD L+ L++ LCGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTHEETLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL+RLG V D+++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 418 GHHIDDAQVTDILQRLGCEVTVGQDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDA 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKIQQLIHAGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS++MS MR SL GLL N +R + IFE + DT P G Q M Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTQAPLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG G+ E W+ E VD +D K D SV++ L + F A + Sbjct: 593 AGAICGNRYEEH----WTLAKET----VDFYDLKGDLESVLDLTGKLADIEFRGEAIAAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQARD---- 699 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+AI Sbjct: 700 -ISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + R VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVARCVEALKERFQASLR 794 >gi|257126906|ref|YP_003165020.1| phenylalanyl-tRNA synthetase subunit beta [Leptotrichia buccalis C-1013-b] gi|257050845|gb|ACV40029.1| phenylalanyl-tRNA synthetase, beta subunit [Leptotrichia buccalis C-1013-b] Length = 798 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 264/820 (32%), Positives = 447/820 (54%), Gaps = 38/820 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L+WLK ++D D + + ++ + LT IG EVEK++ E L ++ E +PD Sbjct: 1 MLISLNWLKQYIDLDGIEINEMENALTMIGQEVEKIEVLGENLENVVTAHIVEKEMHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D GK + +QVVCGA N + G V A G+ + E+ ++ KIRG+ES GM Sbjct: 61 DHLTICKVDNGK-EILQVVCGASNHKAGDKVVLAQVGAKLAED-FVIKKGKIRGVESNGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE+EL + DS IM LP D P G + +YL ++D + ++ +TPNR DC+ GIA + Sbjct: 119 LCSEEELNIGKDSDGIMILPQDTPAGIPMKEYLGINDTVFELEITPNRPDCLSHIGIARE 178 Query: 178 LVAAGLGKLKE----INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 L A ++K IN SSE I ++ DS+L K + +K V +P W Sbjct: 179 LGAYYGKEVKYPSFVINTE---SSEKTADNISVEISDSNLAKRYVARIIKNVTVKESPKW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 +++R++++G+RSI+ +VD +N+V ++ P+H FD +I + VR EK++ LD Sbjct: 236 LKERVESIGIRSINNIVDASNFVMMELNQPNHAFDLDKIEGGKIVVRAGLENEKLVTLDE 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D++VI+ + ++ G++GG+++ +NT ++L+EVA ++ N+ ++ + L + Sbjct: 296 HERELNSDDIVISDAVKAVALGGVMGGENSQITENTKNILLEVANFNSQNVRKTSRRLTL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +DS YRFER VD + I V+ + +LI + GG + +K +N E + Sbjct: 356 SSDSSYRFERRVDEENAINVINRLANLIQEVAGGEILAGAVDNYPVPYEKKSAELNFERL 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G +P E + IL RL VI + ++ PS+R D+E + D EEI+R+YG D Sbjct: 416 NRFVGKAIPRETVVGILTRLEIEVIDNGETLTLTAPSYRDDLENEQDYFEEIIRMYGFDN 475 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQR 529 I++ LP + ++ + + T+ VK + A+ + EV+N+SF+ K+ + + + Q Sbjct: 476 IEN-ILPKLDISEQPVIDTTKLSTQ-VKLIAANAGLKEVINYSFVPKDAMEKIKYTVAQE 533 Query: 530 EL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +L ++L PI+ D +R +LL L+K N++R +++ FEVS +E ++ + Sbjct: 534 KLIDVLKPITEDFVTLRPTLLYSLIKNAKDNINRNVSNIRFFEVSRTFEKAEELAKEEVK 593 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPS 646 GI E LW+ K D +D K V E F L ++ + S Sbjct: 594 LGIILAG---ENDKTLWNPKPVP----YDFYDLKG---IVEEIFTQLKFNNYMIKRSEQS 643 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF--GLSNPICGFEVYLDSIPISQKKRTKT 704 +HPGRS + E++ G FGE HP++L+ F G ++ + G E +D I K+ Sbjct: 644 QFHPGRSVDVFVGRELI-GSFGEIHPDVLENFDLGKTSVLVG-EFNIDLIQKYIGKKANY 701 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + +V + V RD AF++ + I G ++ I+ VD+ I+ V +FD++QG + G KS Sbjct: 702 QGIVKYPA---VPRDFAFVMKEEILVGDVLKTIQKVDKKIEKVELFDIYQGVGVLPGMKS 758 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VAI V+++ T + +I + ++IV V K AVLR Sbjct: 759 VAISVVLRDKSKTLEEKEIVDISNKIVAKVEKDYGAVLRQ 798 >gi|260868240|ref|YP_003234642.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|257764596|dbj|BAI36091.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O111:H- str. 11128] gi|323180492|gb|EFZ66037.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 1180] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 431/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 L E I P+ S +++P+ + + C + VKG+ P WM Sbjct: 180 AVLNQLPLVEPEI-VPVGATSDDTLPITV----EAPEACPRYLGRVVKGINVKAPTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E Sbjct: 235 KEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ T Sbjct: 295 AKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD ++ L++ +CGG A + N P++ I S++ Sbjct: 355 DASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 415 RLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNI 474 Query: 473 KSEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 EP+ + + + +LSL++ VK +L + EV+ +SF+ + + G Sbjct: 475 PDEPVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QK 585 L + +PIS +MS MR SL GLL N +R IFE + DT P G Q Sbjct: 530 ALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQD 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 590 LMLAGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEAN 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 642 PALHPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR-- 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS Sbjct: 699 ---EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI +++Q T +++I + + VE + ++ A LR Sbjct: 756 LAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|152970724|ref|YP_001335833.1| phenylalanyl-tRNA synthetase subunit beta [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150955573|gb|ABR77603.1| phenylalanyl-tRNA synthetase beta subunit [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/817 (32%), Positives = 428/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKRL 414 +R+ERGVD L+ L++ LCGG A D+ N+ + I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTSKENLPTRA-TITLRRSKLDRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + IL+RLG V +++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 417 IGHHIDDAQVTDILQRLGCEVTVGEGEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPD 476 Query: 475 EPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 EP+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 477 EPVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQLIHAGEEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYM 587 + +PIS++MS MR SL GLL N +R + IFE + V + + P G Q M Sbjct: 532 ILPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTNAPLGIRQDVM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG G+ E W+ E VD +D K D +V++ L + F + A + Sbjct: 592 LAGAICGNRYEEH----WTLAKET----VDFYDLKGDLEAVLDLTGKLADIEFRAEATTA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 644 LHPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR---- 698 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+A Sbjct: 699 -DISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +++I + R VE + ++ A LR Sbjct: 758 ISLILQDTSRTLEEEEIAATVARCVEALKERFQASLR 794 >gi|332183953|gb|AEE26207.1| Phenylalanyl-tRNA synthetase beta chain [Francisella cf. novicida 3523] Length = 790 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 266/817 (32%), Positives = 431/817 (52%), Gaps = 48/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P + + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GDFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP+DAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVDAPVGVDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A LK++ I P + + E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKAGLKDLEILEPKVTITDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMAE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVR 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDCDTLVIADDSKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + G + I A ++ K KI ++ R+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIQLITQIAAGDVAPIHGAEDLENLNKENKIALSIKKLNRV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D IE +L+ L +V +D EV+ PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTDFGIEYVTEVLKALHMNVATSFDSNCIEVTPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K ++S + + L R E +N+SFI + F ++ + Sbjct: 478 -PETMP-KYAATKIDISETKQSYDNLSSKLVDRGYHEAINYSFIDPKFDEFF-FEEKGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY-MAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ + + ++ AG+ Sbjct: 535 IKNPISQDLSVMRQSLIPGLINTFRANTSRQQNRIRIFEKGACFKLENSQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ + SL FE +W HP Sbjct: 595 AYG----ELLNTNWSNSKK-----VDFFDVKADVEALCN---GITSLSFEVCNNINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I + + + G G HP +L F + PI FE+ LD + + + Sbjct: 643 GQSAYILANGKEI-GVIGVIHPTVLKTFQIKAKAPIV-FELDLDVLI-----KKEIPNFE 695 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ IK +D ++ DV++FD+++ + +KS+A+ Sbjct: 696 KISKYPSVSRDISFLVDKSVFAGEIIKSIKVLDINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +L Q D+++ L D++V + K VL++ Sbjct: 754 SMLFQ--------DNLQTLDDKLVVESIDKVIEVLKT 782 >gi|291617252|ref|YP_003519994.1| PheT [Pantoea ananatis LMG 20103] gi|291152282|gb|ADD76866.1| PheT [Pantoea ananatis LMG 20103] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 431/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSAALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+TG + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINTGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + DYL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIRDYLQLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L + ++ P+ + +I + +++ ++ C + VKG+ + A P WM Sbjct: 180 AV-----LNSLPLNAPVIEPVAATIADTLPINVEATAACPRYLGRVVKGINVSAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV L+ G P H FD RI + VR A GE + LD E Sbjct: 235 KEKLRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRMAKDGEALTLLDGTE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++ GI GG+H+G + T ++L+E A ++P+ IA + G+ T Sbjct: 295 VKLSSDTLVIADHQKALAMGGIFGGEHSGVNGETQNILLECAWFEPLAIAGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ L+LS+CGG A + + + +P I ++ Sbjct: 355 DASHRYERGVDSALQHKAMERATQLLLSICGGEAGPVIDQTSADALPQPATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G V E IL RLG V +++ P+WR D+ + DLVEEI RIYG + I Sbjct: 415 RLIGHVVSDEQVTDILTRLGCQVSVNPGEWQAVAPAWRFDMAIEEDLVEEIARIYGYNNI 474 Query: 473 KSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P+ V K NLSL+++ K +L + E + +SF+ + L G+ Sbjct: 475 PDVPVQAGLVMTKHREANLSLKRA-----KMLLVDKGYQEAITYSFVDPKVQQLLHPGEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + +PIS+DMS MR SL GLL A N +R + +FE + DT Q Sbjct: 530 ALLLPSPISSDMSTMRLSLWTGLLSAVVYNQNRQQSRVRLFESGLRFVPDTQADLGIRQD 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ SG + + + + VD +D K D S+++ L+++ F + A Sbjct: 590 LMLAGVL--------SGNRYEEHWDLARQTVDFYDLKGDLESLLDLTGKLNAISFRAEAN 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I E + G+ G HP + L+ FE+ + ++ + + Sbjct: 642 PALHPGQSAAIYLQDERI-GFIGVVHPELERKLDLNGRTLVFELLWNK--VADRVLPDAQ 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 +V S +RD+A +V +++PA ++ K + V +FDV++GK + EG KS Sbjct: 699 EV---SRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVSEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI +++Q T +++I + + V + ++ A LR Sbjct: 756 LAISLILQDTSRTLEEEEIAATVAKCVAALKERFQATLR 794 >gi|156974378|ref|YP_001445285.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio harveyi ATCC BAA-1116] gi|156525972|gb|ABU71058.1| hypothetical protein VIBHAR_02093 [Vibrio harveyi ATCC BAA-1116] Length = 806 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 272/831 (32%), Positives = 422/831 (50%), Gaps = 54/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +I+ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADITEPSVEAVAASIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADQNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVI-----GEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + L G + D + ILERLG +V+ + + + P+WR D+ + DL+EE+ R Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVVTTALDNQERGWTATAPTWRFDIAIEQDLIEEVGR 472 Query: 466 IYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L Sbjct: 473 IYGYDNIPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLV 529 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 G L + PISADMS MR L+ GLL N R +FE + + Sbjct: 530 VPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAEN 589 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 Q+ M AG+ G+ S W ++ VD FD K D +V+E + + F Sbjct: 590 GMRQEPMLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANESAYSF 641 Query: 641 ------ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + A HPG+S I + V G G HP + F L+ FEV +I Sbjct: 642 AALSAEDKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFALNGRTIVFEVEWSAI 700 Query: 695 PISQKKRTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDV 752 TK + V LS +RD+A +VD+ + +G +V ++ + + D +FDV Sbjct: 701 ------NTKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGKFLKDAKLFDV 754 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + GK + EGKKS+AI + +Q ++ T D DI +D IV NV +K A LR Sbjct: 755 YVGKGVEEGKKSLAIALTLQSVERTLEDADIAGAVDAIVANVSEKFGASLR 805 >gi|107102270|ref|ZP_01366188.1| hypothetical protein PaerPA_01003327 [Pseudomonas aeruginosa PACS2] Length = 766 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 269/788 (34%), Positives = 421/788 (53%), Gaps = 36/788 (4%) Query: 28 IGLEVEK-VDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVG 85 +GLEV+ + A S + +VLS E++PD D + ++ G + QVVCGAPNVR G Sbjct: 2 VGLEVDADLPVAGAFSGVVVGEVLSTEQHPDADKLRVCQVSNGS-ETFQVVCGAPNVRAG 60 Query: 86 LLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGR 145 L +A G+ +P + + K+RG+ES GM+CS KEL +S+++A ++ELP DAPVG Sbjct: 61 LKIPFAMIGAELP-GDFKIKKAKLRGVESFGMLCSAKELQISEENAGLLELPADAPVGQD 119 Query: 146 LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS--ESIPLE 203 + YLEL D I+V LTPNR DC+ + G+A ++ A L + + + E+ P+E Sbjct: 120 VRTYLELDDYTIEVGLTPNRGDCLSLAGLAREVSAIYDVPLAPVAVDAVAAQHDETRPVE 179 Query: 204 IKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 L + C + ++ V + P WM +RL+ +RSI +VD+TNYV ++ G Sbjct: 180 ----LAAPAACPRYLGRVIRNVDLSRPTPLWMVERLRRSDIRSIDPVVDVTNYVMIELGQ 235 Query: 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA 322 P H FD + I+ + VR A GEK++ LD QE L D +VIA R +IAG++GG+H+ Sbjct: 236 PMHAFDLAEINGGVRVRMAEDGEKLVLLDGQEITLRADTLVIADHQRALAIAGVMGGEHS 295 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 G D+T D+ +E A +D I +A ++ G+ TDS +RFERGVD Q ++ LIL Sbjct: 296 GVSDSTRDLFLEAAFFDTIALAGKARSYGLHTDSSHRFERGVDSQLARKAMERATRLILD 355 Query: 383 LCGGTASDICIARNITYKPR--KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 + GG I + + P+ I V ++ G+ + + +R+L+ L +V+ + + Sbjct: 356 IVGGEPGPIVEQASEAHLPKVAPITLRAERVTQMLGMPLDAAEIVRLLQALELTVVADGE 415 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYV 498 ++ V VPS R D+ + DL+EE+ R+YG +++ P+ Q N ++ + Sbjct: 416 GQWSVGVPSHRFDISLEVDLIEELARLYGYNRL---PVRYPQARLAPNNKPEARAALPLL 472 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 +R+L +R E + +SFI LF G + L + NPISADM+ MR+SL PGL+KA Sbjct: 473 RRLLVARGYQEAITFSFIDPVLFELFDPGTQPLTLANPISADMAAMRSSLWPGLVKALQH 532 Query: 559 NVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 N++R + +FE + EG Q+ M AG G EG W++ + V Sbjct: 533 NLNRQQSRVRLFESGLRFVGQL-EGLKQEAMFAGAICGKRLPEG----WANGRDG----V 583 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 D FDAKAD +V+ +L F G HPG++ I+ +V GY G HP + Sbjct: 584 DFFDAKADVEAVLASAGALGDFSFVPGEHPALHPGQTARIERDGRLV-GYLGALHPELAK 642 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 L P+ FE+ L + K LS V+RDLA +VDQ +PA ++ Sbjct: 643 KLDLEQPVFLFELLLAEVVDGH-----LPKFRELSRFPEVRRDLALLVDQDVPAQDILTQ 697 Query: 737 IK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I+ + D+ +FDV+ GK + +KS+A+ + Q T DD++ IV ++ Sbjct: 698 IRAAAGEWLTDLRLFDVYHGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNSTTQNIVTSLE 757 Query: 796 KKTNAVLR 803 ++ NA LR Sbjct: 758 ERFNATLR 765 >gi|206576685|ref|YP_002237979.1| phenylalanyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] gi|206565743|gb|ACI07519.1| phenylalanyl-tRNA synthetase, beta subunit [Klebsiella pneumoniae 342] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 264/816 (32%), Positives = 425/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD L+ L++ LCGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTNEETLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL+RLG V +++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 418 GHHIDDAQVTDILQRLGCEVTVGQGEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDA 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 478 PVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKIQQLIHAGEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS++MS MR SL GLL N +R + IFE + DT P G Q M Sbjct: 533 LPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTQAPLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG G+ E W+ E VD +D K D SV++ L + F A + Sbjct: 593 AGAICGNRYEEH----WTLAKET----VDFYDLKGDLESVLDLTGKLADIEFRGEAIAAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+AI Sbjct: 699 DISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + R VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVARCVEALKERFQASLR 794 >gi|33152543|ref|NP_873896.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus ducreyi 35000HP] gi|41018303|sp|Q7VLG3|SYFB_HAEDU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33148767|gb|AAP96285.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus ducreyi 35000HP] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 273/824 (33%), Positives = 434/824 (52%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF SWL++ +D VS ++CD +T +GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVDPKVSTAQLCDQITMLGLEVDSVEPISGEFSGVVVAEVVECTQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGAERLLSIVCGAANCRQGLKVACAIEGAILP-GNFKIKKTKLRGQLSEGML 119 Query: 119 CSEKELMLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL + +D +S I+ELP DAP+G + +YL L+D I+VSLTPNR+DC+ + GIA + Sbjct: 120 CSFSELGIKEDQSSGIIELPADAPIGVDIREYLNLNDVAIEVSLTPNRADCLSIAGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQ 236 + ++K I ++ S P+EI D+ S C + +K V N +P W+++ Sbjct: 180 VAVINQMEVKSPVIKPVPATLSAPIEI--DIQAPSACPHYLARIIKNVNVNATSPLWLQE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SI +VDITN L+ G P H FDA ++ + VR A E+++ LD Sbjct: 238 KLRRCGILSIDPIVDITNLSLLELGQPMHAFDAEKVKAPIQVRLAKDQEQLVLLDGTTAK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L + +VIA + ++AGI+GG+ + + T D+++E A + P+ + + G+ TD+ Sbjct: 298 LQTNTLVIADQKNVLALAGIMGGEASKVNAETKDIILEAAFFAPLALTGRTRQYGLHTDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD ++ +LI+ +CGG +++C A N Y P++ + K S Sbjct: 358 SHRFERGVDPTLARQAMERATTLIIEICGGEVAEVCEAINTEYLPKQPIIRLRRTKLDSV 417 Query: 417 IDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 I IED L IL RLG +V E D + +VPSWR D+E + DL+EEI RIYG ++I + Sbjct: 418 IGHYIEDRLVTDILVRLGLNVTCENDGWIATVPSWRFDLEIEEDLIEEIARIYGYNRIPN 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 L +L+L+ S + +K VL EVV +SF+ + L Q Sbjct: 478 NAL-------LAHLTLKGSAEKVLEPNRIKTVLVDNDYQEVVTYSFVDPKIQQLLHPQQE 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPIS++MS MR SLL GLL+ N +R IFE + D Q+ Sbjct: 531 ALILPNPISSEMSAMRVSLLTGLLQTVLYNQNRQQNRIRIFEQGLRFIPDASAESAVRQE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + A + G I W KS + VD FD K D L I + L F + Sbjct: 591 AVFAAVIVGEKHIAN----WEGKS----KAVDFFDLKGD-LEQILALTANKELTFVAKQF 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-----SIPISQKK 700 HPG+S I + + V G+ G HP+I G+ FE+ D +IP++++ Sbjct: 642 PALHPGQSAAIMLNEQEV-GFIGTLHPSIGQKLGIKGTPIVFELLADVVSERAIPVAKE- 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLG 759 +S RD+A ++D+HIPA +++ + R + V +FDV+QG +L Sbjct: 700 ---------ISKFPANNRDIAIVIDEHIPAREVLSACYHAGREQLTAVNLFDVYQGANLV 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + IQ + T +++I ++ +++ + ++ A LR Sbjct: 751 VGKKSLAISLTIQNTEKTLTEEEISAVIQLVLDELAQRFQASLR 794 >gi|224584150|ref|YP_002637948.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468677|gb|ACN46507.1| phenylalanyl-tRNA synthetase beta subunit [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/818 (32%), Positives = 428/818 (52%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLPAGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDGGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + NPIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 593 AGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ + + I + R Sbjct: 645 HPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR----- 698 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+ Sbjct: 699 --EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + VE + ++ A LR Sbjct: 757 AISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|74311967|ref|YP_310386.1| phenylalanyl-tRNA synthetase subunit beta [Shigella sonnei Ss046] gi|157158594|ref|YP_001463010.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli E24377A] gi|218695275|ref|YP_002402942.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli 55989] gi|260855579|ref|YP_003229470.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|300818352|ref|ZP_07098562.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|300821413|ref|ZP_07101560.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|307310716|ref|ZP_07590362.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|331668399|ref|ZP_08369247.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA271] gi|91208138|sp|Q3Z261|SYFB_SHISS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|73855444|gb|AAZ88151.1| phenylalanine tRNA synthetase, beta subunit [Shigella sonnei Ss046] gi|157080624|gb|ABV20332.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli E24377A] gi|218352007|emb|CAU97739.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli 55989] gi|257754228|dbj|BAI25730.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O26:H11 str. 11368] gi|300525916|gb|EFK46985.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 119-7] gi|300528992|gb|EFK50054.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 107-1] gi|306908894|gb|EFN39390.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli W] gi|315061018|gb|ADT75345.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli W] gi|323153049|gb|EFZ39318.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli EPECa14] gi|323169348|gb|EFZ55024.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella sonnei 53G] gi|323175218|gb|EFZ60832.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli LT-68] gi|323186270|gb|EFZ71622.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 1357] gi|323378410|gb|ADX50678.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli KO11] gi|324119199|gb|EGC13087.1| phenylalanyl-tRNA synthetase [Escherichia coli E1167] gi|331063593|gb|EGI35504.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA271] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|188491937|ref|ZP_02999207.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli 53638] gi|188487136|gb|EDU62239.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli 53638] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDTLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|109898809|ref|YP_662064.1| phenylalanyl-tRNA synthetase subunit beta [Pseudoalteromonas atlantica T6c] gi|109701090|gb|ABG41010.1| phenylalanyl-tRNA synthetase beta subunit [Pseudoalteromonas atlantica T6c] Length = 795 Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/820 (32%), Positives = 442/820 (53%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ D+S +++ D +T GLEV+ V+ S + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPDISTQQLADQITMAGLEVDGVEPVAGEFSGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + I +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLQVTKINVGDDELIDIVCGAPNCRQGLKVAVAKVGAVLP-GNFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L+D I+V LTPNR+DC+G+RG+A ++ Sbjct: 120 CSFSELGISDDHDGIVELPADAPIGQDIREYLDLNDVTIEVDLTPNRADCLGMRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + N+ P+ E S+ L C + +KG+ N +P W+ Sbjct: 180 -----GVLNQSNVDMPVYPETAASVADTRGISLAAPQACPRYLGRVIKGIDVNAPSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A+VD+TN+V L+ G+P H FD +S + VR A E+++ LD + Sbjct: 235 QEKLRRSGVRSIDAVVDVTNFVLLELGHPMHAFDNDMLSGDIVVRMAKQDEELVLLDETK 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA + ++AGI GG +G N+ ++ +E A + P I + G+ T Sbjct: 295 VTLKDNTLVIADQDKALAMAGIFGGLDSGVTSNSKNIFLESAFFAPDAIMGKARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 D+ +R+ERGVD Q ++ +L+L + GG A I A + Y P + +V + + Sbjct: 355 DASHRYERGVDPQMQRQAMERATALLLEIVGGEAGPIVEAIDEQYIPPVKDVVLRAARLT 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ GI++ IL RLG +++V VP++R D+ + DL+EEI R+YG + I Sbjct: 415 RVLGIEIEASVVSDILMRLGLDADESNGQWQVKVPAYRFDIAIEEDLIEEIARVYGYNNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQRE 530 + P ++ ++ +L + +K L +R E + +SF+ K QS L+ E Sbjct: 475 PNVAPSAELRMSGRKEQALDVNE---LKLTLTNRDYQEAITYSFVDPKVQSKLY----PE 527 Query: 531 LEIL---NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ + +PISADMS MR S GLL+A N R A +FE + P+ + M Sbjct: 528 IDAIVLPHPISADMSAMRVSAWTGLLQAVSYNQKRQQARVRLFESGLRF---IPDASEKM 584 Query: 588 AAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 G+R+ + SG+ +G L + + VD FDAKAD +++ +D RFE+ Sbjct: 585 --GVRQETVFSGVI-AGNLHDANWDRADKAVDFFDAKADVEALLSLIAPIDVFRFEATEH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S HPG+S I ++ +G G HP GL+ + FE L+ +KK + K Sbjct: 642 SALHPGQSAAIYRD-DVFIGVMGAVHPKFEKLLGLNGRVFVFE--LEIAAFGEKKLPEAK 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKK 763 ++ S +RD+A +VD G +++ I+ ++L+ + +FD+++GK + G K Sbjct: 699 EI---SKFPANRRDIAIVVDDDKVVGEILDCIQKFGANQLV-GLNLFDIYRGKGIEPGFK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI + +Q + T + +I+ ++D I+ + ++ A LR Sbjct: 755 SLAISLTLQDMARTLEEAEIQAVVDGILTKLSEQFGATLR 794 >gi|218554281|ref|YP_002387194.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli IAI1] gi|218361049|emb|CAQ98626.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli IAI1] Length = 795 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLAGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|327393706|dbj|BAK11128.1| phenylalanyl-tRNA synthetase beta chain PheT [Pantoea ananatis AJ13355] Length = 795 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/824 (31%), Positives = 431/824 (52%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSAALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+TG + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINTGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + DYL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIRDYLQLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L + ++ P+ + +I + +++ ++ C + VKG+ + A P WM Sbjct: 180 AV-----LNSLPLNAPVIEPVAATIADTLPINVEATAACPRYLGRVVKGINVSAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV L+ G P H FD RI + VR A GE + LD E Sbjct: 235 KEKLRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRMAKDGEALTLLDGTE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS D +VIA + ++ GI GG+H+G + T ++L+E A ++P+ IA + G+ T Sbjct: 295 VKLSSDTLVIADHQKALAMGGIFGGEHSGVNGETQNILLECAWFEPLAIAGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ L+LS+CGG A + + + +P I ++ Sbjct: 355 DASHRYERGVDSALQHKAMERATQLLLSICGGEAGPVIDQTSADALPQPATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G V E IL RLG V +++ P+WR D+ + DLVEEI RIYG + I Sbjct: 415 RLIGHVVSDEQVTDILTRLGCQVSVTPGEWQAVAPAWRFDMAIEEDLVEEIARIYGYNNI 474 Query: 473 KSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P+ V K NLSL+++ K +L + E + +SF+ + L G+ Sbjct: 475 PDVPVQAGLVMTKHREANLSLKRA-----KMLLVDKGYQEAITYSFVDPKVQQLLHPGEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + +PIS+DMS MR SL GLL A N +R + +FE + DT Q Sbjct: 530 ALLLPSPISSDMSTMRLSLWTGLLSAVVYNQNRQQSRVRLFESGLRFVPDTQADLGIRQD 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ SG + + + + VD +D K D S+++ L+++ F + A Sbjct: 590 LMLAGVL--------SGNRYEEHWDLARQTVDFYDLKGDLESLLDLTGKLNAISFRAEAN 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-----PISQKK 700 HPG+S I E + G+ G HP + L+ FE+ + + P +Q+ Sbjct: 642 PALHPGQSAAIYLQDERI-GFIGVVHPELERKLDLNGRTLVFELLWNKVADRVLPDAQE- 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLG 759 +S +RD+A +V +++PA ++ K + V +FDV++GK + Sbjct: 700 ---------VSRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVS 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 751 EGYKSLAISLILQDTSRTLEEEEIAATVAKCVAALKERFQATLR 794 >gi|16129669|ref|NP_416228.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|89108553|ref|AP_002333.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. W3110] gi|157161174|ref|YP_001458492.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli HS] gi|170019937|ref|YP_001724891.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli ATCC 8739] gi|170081372|ref|YP_001730692.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194438497|ref|ZP_03070586.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli 101-1] gi|238900928|ref|YP_002926724.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|253773332|ref|YP_003036163.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254161773|ref|YP_003044881.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli B str. REL606] gi|256022623|ref|ZP_05436488.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia sp. 4_1_40B] gi|300917725|ref|ZP_07134374.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] gi|300930811|ref|ZP_07146183.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|300951313|ref|ZP_07165157.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|300958602|ref|ZP_07170727.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] gi|301025264|ref|ZP_07188829.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|301647904|ref|ZP_07247681.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|307138373|ref|ZP_07497729.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli H736] gi|312969742|ref|ZP_07783925.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 1827-70] gi|331642311|ref|ZP_08343446.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|2507430|sp|P07395|SYFB_ECOLI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|325053952|pdb|3PCO|B Chain B, Crystal Structure Of E. Coli Phenylalanine-Trna Synthetase Complexed With Phenylalanine And Amp gi|325053954|pdb|3PCO|D Chain D, Crystal Structure Of E. Coli Phenylalanine-Trna Synthetase Complexed With Phenylalanine And Amp gi|146346|gb|AAA51470.1| phenylalanyl-tRNA synthetase beta-subunit [Escherichia coli] gi|1742793|dbj|BAA15481.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K12 substr. W3110] gi|1788006|gb|AAC74783.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. MG1655] gi|157066854|gb|ABV06109.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli HS] gi|169754865|gb|ACA77564.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli ATCC 8739] gi|169889207|gb|ACB02914.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli str. K-12 substr. DH10B] gi|194422507|gb|EDX38505.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli 101-1] gi|238862020|gb|ACR64018.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli BW2952] gi|242377436|emb|CAQ32188.1| phenylalanyl-tRNA synthetase beta-chain, subunit of phenylalanyl-tRNA synthetase [Escherichia coli BL21(DE3)] gi|253324376|gb|ACT28978.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253973674|gb|ACT39345.1| phenylalanyl-tRNA synthetase beta subunit [Escherichia coli B str. REL606] gi|253977868|gb|ACT43538.1| phenylalanyl-tRNA synthetase beta subunit [Escherichia coli BL21(DE3)] gi|260449164|gb|ACX39586.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli DH1] gi|299880129|gb|EFI88340.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 196-1] gi|300314727|gb|EFJ64511.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 175-1] gi|300415126|gb|EFJ98436.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 115-1] gi|300449410|gb|EFK13030.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 116-1] gi|300461369|gb|EFK24862.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 187-1] gi|301073961|gb|EFK88767.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 146-1] gi|310338027|gb|EFQ03116.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 1827-70] gi|315136354|dbj|BAJ43513.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli DH1] gi|315618910|gb|EFU99493.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 3431] gi|323937316|gb|EGB33595.1| phenylalanyl-tRNA synthetase [Escherichia coli E1520] gi|323940620|gb|EGB36811.1| phenylalanyl-tRNA synthetase [Escherichia coli E482] gi|323962097|gb|EGB57693.1| phenylalanyl-tRNA synthetase [Escherichia coli H489] gi|323973906|gb|EGB69078.1| phenylalanyl-tRNA synthetase [Escherichia coli TA007] gi|331039109|gb|EGI11329.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H736] gi|332343432|gb|AEE56766.1| phenylalanyl-tRNA synthetase, beta subunit PheT [Escherichia coli UMNK88] Length = 795 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L +L + +I + ++ C + VKG+ P WM+++ Sbjct: 180 --AVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|262044126|ref|ZP_06017201.1| phenylalanyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038525|gb|EEW39721.1| phenylalanyl-tRNA synthetase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 795 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/817 (32%), Positives = 427/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSEALSDQITMAGLEVDGVEPVAGSFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ P+++ +I + +D C + VKG+ P WM+++ Sbjct: 180 AVLNKAPLNAPEIT-PVAA-TIDDVLPIQVDAPQACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDRDRIEGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DSDTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKRL 414 +R+ERGVD L+ L++ LCGG A D+ N+ + I S++ RL Sbjct: 358 HRYERGVDPALQYKALERATRLLIDLCGGEAGPVIDVTSKENLPTRA-TITLRRSKLDRL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + IL+RLG V +++ PSWR D+E + DLVEE+ R+YG + I Sbjct: 417 IGHHIADAQVTDILQRLGCEVTVAEGEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPD 476 Query: 475 EPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 EP+ + + +LSL++ VK +L + EV+ +SF+ + L G+ L Sbjct: 477 EPVQAGLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQLIHAGEEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYM 587 + +PIS++MS MR SL GLL N +R + IFE + V + + P G Q M Sbjct: 532 ILPSPISSEMSAMRLSLWTGLLGTVVYNQNRQQSRVRIFESGLRFVPDTNAPLGIRQDVM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG G+ E W+ E VD +D K D +V++ L + F + A + Sbjct: 592 LAGAICGNRYEEH----WTLAKET----VDFYDLKGDLEAVLDLTGKLADIEFRAEATTA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 644 LHPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR---- 698 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V +++ A L K + V +FDV++GK + EG KS+A Sbjct: 699 -DISRFPANRRDIAVLVAENVAAADVLAECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I +++Q T +++I + R VE + ++ LR Sbjct: 758 ISLILQDTSRTLEEEEIAATVARCVEALKERFQTSLR 794 >gi|254374294|ref|ZP_04989776.1| phenylalanyl-tRNA synthetase [Francisella novicida GA99-3548] gi|151572014|gb|EDN37668.1| phenylalanyl-tRNA synthetase [Francisella novicida GA99-3548] Length = 790 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 269/812 (33%), Positives = 424/812 (52%), Gaps = 40/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L+ + + + DTLT GLEV+ +++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLNDTQTSQDLADTLTLAGLEVDAIESVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP++APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVNAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKDLEILEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDSDTLVIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI +++ + Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQVKINLSINKLNHV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + L R E +N+SFI + F R + Sbjct: 478 -PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG+ Sbjct: 535 IQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ L SL FE +W HP Sbjct: 595 AYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNNINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I + + G G HP +L F + PI FE+ LD + + + Sbjct: 643 GQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLDVLT-----KRQIPNFT 695 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A+ Sbjct: 696 KISKYPSVSRDISFLVDKSVLAGDIIKAIKALNINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L Q T D I +D+++E + K N Sbjct: 754 NMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|197118377|ref|YP_002138804.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter bemidjiensis Bem] gi|197087737|gb|ACH39008.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter bemidjiensis Bem] Length = 801 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 277/822 (33%), Positives = 442/822 (53%), Gaps = 40/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D D+ ++ LT +GLEVE+++ + + +VL ++P+ D Sbjct: 1 MIVTYNWLKEFVDCDLPAAELSHLLTMLGLEVERMEELGGGMDDVVVAQVLEKNQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + + VVCGA N + G A G+ +P + + KIRG ES GM+ Sbjct: 61 KLSLCKVDNGK-EILNVVCGAQNFKAGDKVALAQIGATLP-GDFKIKRSKIRGEESCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL LS +SA IM LP +G L D L D + ++ LTPNR+DC+ V GIA + Sbjct: 119 CSEKELALSLESAGIMILPEAFKLGTPLFDALGTKDTVFEIGLTPNRADCLSVVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEI--KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +AA LGK K ++ P++ K ++ LC + + G +P W+ Sbjct: 178 IAAKLGK-KVHYPGLEVAETGAPIDTIAKVTIEAPELCPRYTARHITGCTLAPSPAWLAN 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEY 295 RL+A G+RSI+ +VD+TNYV L+ G+P H FD + ++ + V A GEK + LD QE Sbjct: 237 RLQAAGIRSINNVVDVTNYVLLEYGHPLHAFDFTLVAGGKIVVAAAGEGEKFVTLDGQER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ ++ I + ++AGI+GG ++ + TT+VL+E A ++P I ++ K LGI T+ Sbjct: 297 ILTASDLTIRDGEKGVALAGIMGGGNSEIGEGTTEVLLESAYFNPSAIRKTSKRLGIHTE 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRL 414 S +RFERG D+ G+ L LI L GG A I +PR I + + + Sbjct: 357 SSHRFERGTDVAGLTRALNRAAQLIAELSGGKIAKGIIDVYPHPVEPRVIKARLARINAV 416 Query: 415 SGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 SG+ + + ILERL F V E F+V VP +R D+E + DLVEE++R+ G +++ Sbjct: 417 SGLSLNAAEVQDILERLEFEVKQPEPGVFQVRVPLFRVDLEREIDLVEEVVRLNGFEKVP 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI---SKEQSVLFGGGQRE 530 + LP V Q+ R VK +L S+ + EV+N+SF+ S E+ +L R Sbjct: 477 AT-LPQASVFSDLPSDFQRLAAR-VKDLLVSQGLSEVINYSFVAPASCEKILLSADDVRS 534 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 + +LNPIS ++S MRT++LPGLL +N+ + IFE+ +Y + PE Sbjct: 535 NGMVLLNPISDELSVMRTTMLPGLLDTAVKNISFRTLNLRIFEMRRIYLPAPGKELPEEP 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESG 643 Y++A + GS +EG W+ + E +D FD K A +++ E + S ES Sbjct: 595 LYVSA-LLTGSRDLEG----WNQQKGE----IDFFDVKGIAENILGELSIPNVSFSAESL 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P +YHPG++ I + VLG GE HP + + +G+ P+ E+ +++ S+K Sbjct: 646 DP-YYHPGKACRILCGNK-VLGSLGELHPTVQENYGIGTPLYYLELNFEALLASRKG--- 700 Query: 704 TKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEG 761 K + S P RD+A ++ + +P ++ +K V ++ V VFDV+ G ++ Sbjct: 701 -KGAAQVPSRFPSTFRDIAMLLPKELPVADVLYCVKGVKAPELEGVEVFDVYTGGNISAA 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KSVAI+V + T DD++ L R+ + + KK N R Sbjct: 760 EKSVAIRVRYGSKERTLTDDEVTRLHQRVTDALTKKLNVSFR 801 >gi|193069010|ref|ZP_03049969.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli E110019] gi|192957805|gb|EDV88249.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli E110019] Length = 795 Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEAKLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D S+++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESILDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|331647205|ref|ZP_08348299.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli M605] gi|330911518|gb|EGH40028.1| phenylalanyl-tRNA synthetase beta chain [Escherichia coli AA86] gi|331043988|gb|EGI16124.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli M605] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 266/821 (32%), Positives = 430/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 +R+ERGVD PVL+H L++ +CGG A + N P++ I S+ Sbjct: 358 HRYERGVD-----PVLQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + Sbjct: 413 LDRLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYN 472 Query: 471 QIKSEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I EP+ + + + +LSL++ VK +L + EV+ +SF+ + + G Sbjct: 473 NIPDEPVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG-- 583 L + +PIS +MS MR SL GLL N +R IFE + DT P G Sbjct: 528 VEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ G+ E W+ E VD +D K D SV++ L+ + F + Sbjct: 588 QDLMLAGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 640 ANPALHPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG Sbjct: 699 -----EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|15802125|ref|NP_288147.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 EDL933] gi|15831674|ref|NP_310447.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. Sakai] gi|168749470|ref|ZP_02774492.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4113] gi|168756714|ref|ZP_02781721.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4401] gi|168762223|ref|ZP_02787230.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4501] gi|168770474|ref|ZP_02795481.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4486] gi|168774986|ref|ZP_02799993.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4196] gi|168782128|ref|ZP_02807135.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4076] gi|168788109|ref|ZP_02813116.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC869] gi|168800106|ref|ZP_02825113.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC508] gi|195937397|ref|ZP_03082779.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. EC4024] gi|208810725|ref|ZP_03252601.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4206] gi|208816514|ref|ZP_03257634.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4045] gi|208818689|ref|ZP_03259009.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4042] gi|209399911|ref|YP_002270783.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4115] gi|217328979|ref|ZP_03445060.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. TW14588] gi|254793330|ref|YP_003078167.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. TW14359] gi|261227794|ref|ZP_05942075.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK2000] gi|261258041|ref|ZP_05950574.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. FRIK966] gi|331653114|ref|ZP_08354119.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli M718] gi|30316253|sp|Q8XE32|SYFB_ECO57 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|12515724|gb|AAG56700.1|AE005394_9 phenylalanine tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EDL933] gi|13361887|dbj|BAB35843.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli O157:H7 str. Sakai] gi|187769368|gb|EDU33212.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4196] gi|188016222|gb|EDU54344.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4113] gi|189000347|gb|EDU69333.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4076] gi|189356209|gb|EDU74628.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4401] gi|189360628|gb|EDU79047.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4486] gi|189367519|gb|EDU85935.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4501] gi|189371944|gb|EDU90360.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC869] gi|189377559|gb|EDU95975.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC508] gi|208725241|gb|EDZ74948.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4206] gi|208730857|gb|EDZ79546.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4045] gi|208738812|gb|EDZ86494.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4042] gi|209161311|gb|ACI38744.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. EC4115] gi|209768888|gb|ACI82756.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli] gi|209768890|gb|ACI82757.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli] gi|209768892|gb|ACI82758.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli] gi|209768896|gb|ACI82760.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli] gi|217318326|gb|EEC26753.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli O157:H7 str. TW14588] gi|254592730|gb|ACT72091.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O157:H7 str. TW14359] gi|320188401|gb|EFW63063.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. EC1212] gi|320646921|gb|EFX15754.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. 493-89] gi|320652203|gb|EFX20501.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H- str. H 2687] gi|320657804|gb|EFX25566.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320668276|gb|EFX35103.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. LSU-61] gi|326342081|gb|EGD65862.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1044] gi|326343633|gb|EGD67395.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli O157:H7 str. 1125] gi|331049212|gb|EGI21284.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli M718] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|293415032|ref|ZP_06657675.1| phenylalanyl-tRNA synthetase [Escherichia coli B185] gi|291432680|gb|EFF05659.1| phenylalanyl-tRNA synthetase [Escherichia coli B185] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDTS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|313200509|ref|YP_004039167.1| phenylalanyl-tRNA synthetase subunit beta [Methylovorus sp. MP688] gi|312439825|gb|ADQ83931.1| phenylalanyl-tRNA synthetase, beta subunit [Methylovorus sp. MP688] Length = 784 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 274/824 (33%), Positives = 438/824 (53%), Gaps = 60/824 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ +++ +S E++ LT GLEVE +D A S + +VL+ E++PD D Sbjct: 1 MQFSEIWLRQYVNPAISSEQLGHALTMAGLEVEAMDAVAPAFSHVVVAEVLTAEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +D G +Q+VCGA N RVGL A G+ +P N + K+RG+ES GMM Sbjct: 61 RLQVLTVDVGSGTPLQIVCGASNARVGLKAPCAMVGAALPGFN--IKQAKVRGVESFGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L+++S+ ++ELP +A G + D+L+L D + + LTPNRSDC+ + GIA D+ Sbjct: 119 CSAKELGLAEESSGLLELPAEAVTGTDIRDFLQLDDQLFTLKLTPNRSDCLSIVGIARDV 178 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 A L+ I+ P +S + + ++ ++ C ++ ++GV VA P+WM+ Sbjct: 179 AAITGAALQVPAIDQISPAASTGVKIAVR----EAEACPYYSGRSIRGVNAAVATPDWMQ 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+RSISA+VDITNYV L+ G P H FDA ++ + VR A SGE + L+ Q+ Sbjct: 235 RRLERSGIRSISAIVDITNYVLLELGQPLHAFDAGKLQGDIEVRYANSGEALSLLNQQQA 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA ++AGI+GG + T D+ +E A + P IA + LG+ TD Sbjct: 295 NLQQDMLVIADAQGPLALAGIMGGLDSAVSLETRDIFLESAYFAPGVIAGKARRLGLSTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S YRFERGVD L+ +LIL +CGG D+ ++ RK V + E + LS Sbjct: 355 SSYRFERGVDFGSTRQALERATALILEICGGEPGDVVEVKS-ALPTRKPVTLRYE-RLLS 412 Query: 416 GIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + +P+E S I RLGF ++E++ PS+R D+E + DL+EE+ R++G + I Sbjct: 413 VLGIPLERSEVSAIFARLGFEARESDGRYEITPPSYRFDIEIEEDLIEEVARLHGYEHIP 472 Query: 474 S-------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + LP + E R +V+ L + E+V++SF+ G Sbjct: 473 AIAPQARLAMLPASGSELNRA---------WVRDALVAGGYQEIVSYSFVDASWERDLLG 523 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEGQK 585 + + NPI+++MS MR+ L GLL+ N++R +FE+ Y D+ + Sbjct: 524 NNDAIVLKNPIASNMSVMRSGLWGGLLQTLVYNLNRKQPRAKLFEIGSAYHKADSGYAET 583 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESG 643 +G+ G++ E W++ R VD +D KA DAL+ +++ Sbjct: 584 MRVSGLAYGAAHPEQ----WAEDE----RDVDFYDVKAQVDALTHGRAV-------YQAA 628 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I +I+ G+ G+ HP + L FE L + Q R + Sbjct: 629 THPALHPGQSAHILLDGKII-GWLGKLHPKWQQHYQLPRSTVVFECDLAPLLTVQLPRYQ 687 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII---KNVDRLIDDVTVFDVFQGKSLGE 760 ++ PV+RD+A +VD+ P L++ + KNV LI D+ +FD+++GK + E Sbjct: 688 -----EVAKFPPVRRDIAVVVDEATPVQALLDTMNDAKNV--LISDIALFDIYRGKGVPE 740 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KKS+A VL+Q + T D + +M ++ + K A LR+ Sbjct: 741 NKKSLAFLVLMQDTQKTLTDAEADAVMSNLLALLKTKHGAELRN 784 >gi|254372844|ref|ZP_04988333.1| phenylalanine tRNA synthetase [Francisella tularensis subsp. novicida GA99-3549] gi|151570571|gb|EDN36225.1| phenylalanine tRNA synthetase [Francisella novicida GA99-3549] Length = 790 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 272/812 (33%), Positives = 428/812 (52%), Gaps = 40/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L+ + + + DTLT GLEV+ +++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLNDTQTSQDLADTLTLAGLEVDAIESVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP++APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVNAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKDLEILEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDSDTLVIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI +++ + Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQVKINLSINKLNHV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + L R E +N+SFI + F R + Sbjct: 478 -PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG+ Sbjct: 535 IQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGTCFKLQDNQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ L SL FE +W HP Sbjct: 595 AYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I +A + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 643 GQSAYILANANKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK--- 696 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ I+ ++ ++ DV++FD+++ + +KS+A+ Sbjct: 697 -ISKYPSVSRDISFLVDKSVLAGDIIKAIRALNINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L Q T D I +D+++E + K N Sbjct: 754 NMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|57234859|ref|YP_181112.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides ethenogenes 195] gi|91208238|sp|Q3Z9I7|SYFB_DEHE1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|57225307|gb|AAW40364.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides ethenogenes 195] Length = 809 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 270/835 (32%), Positives = 448/835 (53%), Gaps = 57/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK L WLK++L TD+S ++ + +T G EV +++R+ P V +++ V R+P+ D Sbjct: 1 MKIPLKWLKEYLPTDMSPAELAERMTMAGTEVTVLNSRKDKWPNVYVGQIMEVNRHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIES 114 +L ++D G+ QE VV GAPN + G V+A G+ + + + M++ +RG+ES Sbjct: 61 RLVLVKVDWGQGQET-VVTGAPNCKAGDKVVFARTGAVLIDGHNGKEMVLKPAVLRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSE+EL LSD+ I+ LP DAPVG S+YL + I+D+ LTPNR D + V G+ Sbjct: 120 CGMVCSERELGLSDEHEGILILPADAPVGMLASEYL--GEIILDLELTPNRGDLMCVTGV 177 Query: 175 ALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 A +L A + +L +IS P + + I +I ++ ++ LC + ++G++ +P Sbjct: 178 AREL-GALIDRLP--SISTPDFKATGKDIKDKINIEIKNTKLCTRYTASLIEGIKIGESP 234 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 +W+++RL A G+R I+ +VD TNYV L+ G P H FD +I S + VR A GE + L Sbjct: 235 DWLKERLIACGMRPINNVVDATNYVMLEFGQPLHSFDYDQIKSKHIIVRPAAEGEVLTTL 294 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E LSPD ++I +I ++AG++GG++ + T VL+E A +D +I R+ K L Sbjct: 295 DGVERKLSPDMLLITEPDKIIALAGVMGGENTEVTEKTASVLLESATFDKHSIRRTAKAL 354 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-S 409 + +++ RFE+G+ + LK LIL + GG A+ + K R V ++ S Sbjct: 355 KLQSEASARFEKGLSFELAPVALKRATQLILEIAGGQAASGLMDVMPVKKDRNSVVLSLS 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEY-------------DKFEVSVPSWRQDVEEK 456 +V R+ G++ DS +I +RLGF+ + EY DK WR D+E Sbjct: 415 KVNRVLGLEGEKFDSCKIAKRLGFAWMPEYVPGMEEFGYGSVDDKMRFFPGYWRMDIESD 474 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D++EE+ RI G D I LPL + K R+++++L+ E++++SF Sbjct: 475 IDMIEEVARIAGYDTIPC--LPLDKAIPKIETPPLPGIKRFLRQILSGYGFQELISYSFT 532 Query: 517 SKEQ-SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 S+E S +F G + E L I NP+S++ MRTSL P L + N ++E+ Sbjct: 533 SREMLSRVFSGAEPECLAISNPMSSEQEVMRTSLRPALYASLAANRRFEKNGLRLYELGR 592 Query: 575 VY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 +Y + + + + M + GS+ S W + D FDAK ++E Sbjct: 593 IYLPKENNKQDEPEMLCALIAGSA----SEAWW----QRNTAGFDFFDAKG----IVESL 640 Query: 633 VSLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 VS + + S P ++GI+ ++ +G G+ P D FG++ P+ FE+ Sbjct: 641 VSRLGIAADFAVSDEPGLTPGYQAGIL--VGDMPVGVLGQLSPQTADKFGITEPVYMFEI 698 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV 749 L + + T +K ++ V+RDLA ++D+ I + +II D L+ +V + Sbjct: 699 NLSKL---ITRATVRRKFTQINRFPSVERDLALVLDRSITNRQVTDIISEFD-LVKNVEL 754 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD++QGK + E KKS+A +L Q T +D D+ +M++I++ + +T AVLRS Sbjct: 755 FDMYQGKQVAEDKKSLAYHLLFQSDTHTLKDADVDSVMNQILKRLNTETGAVLRS 809 >gi|293446088|ref|ZP_06662510.1| phenylalanyl-tRNA synthetase [Escherichia coli B088] gi|291322918|gb|EFE62346.1| phenylalanyl-tRNA synthetase [Escherichia coli B088] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTQVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|320194575|gb|EFW69206.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli WV_060327] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDGLANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGDDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ RIYG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|320641562|gb|EFX10950.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O157:H7 str. G5101] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERTTRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL+ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKS-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|281178784|dbj|BAI55114.1| phenylalanyl-tRNA synthetase beta subunit [Escherichia coli SE15] Length = 795 Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGIHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|306815033|ref|ZP_07449189.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli NC101] gi|305851681|gb|EFM52134.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli NC101] gi|324007098|gb|EGB76317.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 57-2] Length = 795 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 263/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ RIYG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARIYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|325917702|ref|ZP_08179893.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas vesicatoria ATCC 35937] gi|325536096|gb|EGD07901.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas vesicatoria ATCC 35937] Length = 792 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 252/789 (31%), Positives = 415/789 (52%), Gaps = 46/789 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ S E++ TLT+IGLEVE V EAL + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQASREELAATLTAIGLEVEDVTPLGEALGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGALLQIVCGAPNARAGLVAPLALVGAQIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L+DYL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALADYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E+ + C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVELNAGKEAPRYCG----RVIEGIDPLAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+ SGE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLQGPIGVRRSRSGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I R ++AG++GG D T +V +E A +DP I G+ G+ TD Sbjct: 295 TLDDSFLTITDADRPVALAGLMGGLDTRVTDTTRNVFLESAYFDPAAIMGRGRKFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + + +RIL LG + + ++V PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDVEVVRILSALGMQLDAVSEGWQVVAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 + P +++ L + V+R L +R + E +N++F+ E+ L G Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTDG--- 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQ 584 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ D P+ Sbjct: 529 LVPLANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAASTQAGDAPQES 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++A + + ++ W E R VD D K D +++ S L F+ + Sbjct: 589 QHVAVAVCGDALALQ-----WG----EPARKVDFHDVKGDLMALAA--ASGAVLEFQPSS 637 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + +G+ G+ HP + + + FE+ L P+ Q+ + Sbjct: 638 QPFGHPGRSADIYREG-VCIGWIGQVHPRLSKAMEIDVDVIAFELQL--APLVQRALPRA 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + LS V+RDLAF+V + + L ++ V L+ +V +FD + G+ + G K Sbjct: 695 GE---LSRFPSVRRDLAFLVPEDVSWAALSASVQTTVGPLLREVQLFDRYVGQGVEPGFK 751 Query: 764 SVAIQVLIQ 772 S+A+ +++Q Sbjct: 752 SLAMGLILQ 760 >gi|95930291|ref|ZP_01313029.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfuromonas acetoxidans DSM 684] gi|95133754|gb|EAT15415.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfuromonas acetoxidans DSM 684] Length = 804 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 272/824 (33%), Positives = 452/824 (54%), Gaps = 41/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M T WLK+ +D D+ +++ LT GLEV+ +++ A L + ++ VE +PD D Sbjct: 1 MNVTYKWLKEFVDFDLDGDQLSHQLTMAGLEVDYMEHLGAGLDSVIVAQLDRVEAHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++TG + I VVCGA N + G L A G+ +P + + KIRG S GM+ Sbjct: 61 KLTMCQVNTGT-EVIPVVCGAKNHKQGDLIALAQVGTILP-GDFKIKKSKIRGAVSQGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+++S I+ LP +G + D L L D ++ LTPNR+DC+ V G+A + Sbjct: 119 CSEKELGLAEESEGILILPQGLALGTPVFDALGLKDIRYEIGLTPNRADCLSVAGVARE- 177 Query: 179 VAAGLGKLKEINISCPL--SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 VAA +GK + P+ ++E I ++D+ C + ++GV+ +P W+ + Sbjct: 178 VAAMVGKTMTLPEVAPVDEAAEEIEKLTSVTIEDADGCPRYMARLIQGVKIGPSPGWLVR 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFD-ASRISDVLTVRRACSGEKILALDNQEY 295 RL++VG RSI+ +VD+TNY+ ++ G+P H FD S + V+RA GE + LD Q Sbjct: 238 RLESVGQRSINNVVDVTNYLLMELGHPLHAFDFGSLRGQRIIVKRAADGESFVTLDGQTR 297 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L ++VI ++AG++GG+++ +D+T DVL+E A +DPI+I R+ K LGI ++ Sbjct: 298 TLQGSDMVICDAEGSVALAGVMGGENSEVEDDTVDVLLESAYFDPISIRRTSKRLGIHSE 357 Query: 356 SRYRFERGVDLQGMIPV-LKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKR 413 + +RFERG D+ ++PV L+ +LI L GG A + T + R + ++ R Sbjct: 358 ASHRFERGADID-IVPVALERATALIQQLAGGRVAKGVIDTYPKTLEKRTVAITVNKTNR 416 Query: 414 LSGIDVP---IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L G+D+ I+ LR +E ++ G+ + +V +P R D+E + DL+EE+ R+ G D Sbjct: 417 LLGLDLTLQQIDTLLRSIELETTALAGDEEGLQVVIPMSRHDLEREVDLIEEVARLNGYD 476 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I +P ++V +R QQS ++ + ++ E++N+SF+S Q + Sbjct: 477 NIPV-TMPASRVVHRRK-ETQQSFVTQLRDAMVAQGAREIINYSFVSPTSWDKIQLKQDD 534 Query: 531 L-----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 L +LNP++ + S MRTSL+PG+L+ RN+ D +FE+ V+ + D P Sbjct: 535 LRRTNVRVLNPLTEEQSVMRTSLVPGMLEVVSRNLAYRSDDLRLFELRPVFNVVADQDQP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + A I G +EG WS + + VD FD K + V+ ++L SL+ E Sbjct: 595 CEVVNLCA-ILTGRRELEG----WSQQDDT----VDFFDLKG-LVEVVAQQLNLSSLQVE 644 Query: 642 SGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A S+ HPG+S I + +++ G GE HP + D + ++ P+ F V LD +P Sbjct: 645 ADACQSYLHPGKSCRIYSGKKLI-GVMGEVHPVVQDAYDINQPV--FLVELD-VPAMIAG 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLG 759 R + +S V RD A ++D + A ++ I +V + +DDV +FD++ GK + Sbjct: 701 RAQAATFQPISRFPDVYRDSAILIDDEVSADQVLKGIGSVKVKNLDDVVLFDLYSGKGIP 760 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+A +V + + T DD+I + +IV+++ K A LR Sbjct: 761 EGKKSLAFRVRYRSTEKTLTDDEINKMHAKIVKSLEKNLGAELR 804 >gi|311693967|gb|ADP96840.1| phenylalanyl-tRNA synthetase beta subunit [marine bacterium HP15] Length = 790 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 265/819 (32%), Positives = 432/819 (52%), Gaps = 44/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + +++ D +T GLEV+ + S + +V SV+ +PD D Sbjct: 1 MKFSEQWLREWVNPQIDTQELMDQITMAGLEVDGFEPVAGQFSGVIVGEVQSVQPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G E+QVVCGAPNVR G+ +A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVCQVSDGS-SEVQVVCGAPNVREGMKVPFAVVGAVLP-GDFKIKKAKLRGQPSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL LS++ +MELP DAPVG ++DYL+L+D IDV LTPNR+DC+ ++GIA ++ Sbjct: 119 CSESELGLSENHDGLMELPADAPVGKDVADYLKLNDVTIDVDLTPNRADCLSIKGIAREV 178 Query: 179 VAAGLGKLKEINISCPL--SSESIPLEIK-FDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L + + P ES+ E+ ++ + C + ++ V +P WM Sbjct: 179 -----GVLNSMLFNSPAIEPVESVHSEVPDIRVEAPAGCPRYLGRILRNVNLQAESPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A VD+TNYV L+ G P H FD I + VR A GEK++ LD QE Sbjct: 234 QEKLRRSGIRSIDAAVDVTNYVMLELGQPMHAFDRDEIHGGIVVRMARIGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ +VIA + +IAG++GG+H+G T D+++E A +DPI +A ++ G+ T Sbjct: 294 VELTQGTLVIADHEKPIAIAGVMGGEHSGVSPKTRDLVLESAYFDPITLAGKARHYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+ +RFERGVD + ++ SL++ + GG +I + PR V ++ RL Sbjct: 354 DASHRFERGVDYKLARDAMERATSLLMDIVGGEPGEIVEVASDEDMPRDRV-VDLRAGRL 412 Query: 415 S---GIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + G+++ IL RLG V + + VSVPS+R D+ + DL+EE+ RIYG + Sbjct: 413 NDVLGMEIDRTTVEEILTRLGLRVEKLLKNGWRVSVPSFRPDISIEEDLIEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFISKEQSVLFGGG 527 LP+T+ L ++ R V + E V +SF+ + L Sbjct: 473 N-----LPVTEPNGSLGLRPEEEAVRPVSAIRNFFVDHGYQEAVTYSFVDPKVQQLVDPD 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 ++ + + NPIS+D+S MRTSL GLLK N +R +FE + + Q+ Sbjct: 528 RQGIALANPISSDLSVMRTSLWSGLLKTVAYNQNRQQPRIRLFETGLRFLQEGERIDQQP 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G+ E W++ R D FD K D S+ + ++ +RF Sbjct: 588 MLAGVVVGNQFPEN----WANGR----RTADFFDVKGDLESLFR-LLGIE-IRFVGSQHP 637 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ + E V G+ G HP + L+ I FE++L+SI K Sbjct: 638 ALHPGQTAELMRDGEHV-GWLGTLHPQVQKNLELNGTILMFELFLNSIVTGYVPNFK--- 693 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S V+RDLA I+ + + + K+ + + FDV++G+SLGEG +S+ Sbjct: 694 --EISKFPEVRRDLAIIIGSEVAFADVERVARKHAGEQLTALRAFDVYEGESLGEGNRSL 751 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A+ + Q + T +D++ L + +++ + ++ A LRS Sbjct: 752 ALSLFWQHPERTLNEDEVHSLFNGVIDALKEELGATLRS 790 >gi|323968483|gb|EGB63889.1| phenylalanyl-tRNA synthetase [Escherichia coli M863] gi|327252830|gb|EGE64484.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli STEC_7v] Length = 795 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSNALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQANLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|331683220|ref|ZP_08383821.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H299] gi|331079435|gb|EGI50632.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H299] Length = 795 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAML 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|253989351|ref|YP_003040707.1| phenylalanyl-tRNA synthetase subunit beta [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780801|emb|CAQ83963.1| phenylalanyl-tRNA synthetase beta chain [Photorhabdus asymbiotica] Length = 795 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 270/820 (32%), Positives = 431/820 (52%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERNP 56 MKF+ WL++ ++ +S E++ D +T +GLEV D EA++ I +V+ ++P Sbjct: 1 MKFSELWLREWVNPAISSEELSDQMTMLGLEV---DGMEAVAGQFHGVVIGEVVECAQHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + D + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S Sbjct: 58 NADKLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSE 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL +S+D I+ELP DAP+G L +YL+L D +I++S+TP+R+DC+ + G+A Sbjct: 117 GMLCSFSELGISEDHDGIIELPNDAPLGIDLREYLKLDDSVIEISITPDRADCLSIIGVA 176 Query: 176 LDLVAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PN 232 D+ A L E I P + P+ ++ + C + ++ + A P Sbjct: 177 RDVAVANKIPLSEQQIEAVKPTTDTVFPIRVEV----TEACPRYLGRVIEKINVKAATPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WMR++L+ G+RSI +VD+TNYV L+ G P H FD R++ +TVR A EK++ LD Sbjct: 233 WMREKLRRGGIRSIDPIVDVTNYVLLELGQPLHAFDLERLNGSITVRMAKQDEKLVLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +LS D +VI+ + + ++AGI GG+H+G ++ T ++L+E A + P+ IA + G+ Sbjct: 293 TETNLSADTLVISDEKQAVAMAGIFGGEHSGVNEKTQNILLECAFFSPLAIAGRARRYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSE 410 TD+ +R+ERGVD Q ++ L++ +CGG A I + + KP I + Sbjct: 353 HTDASHRYERGVDPQLQHKAIERATQLLIDICGGEAGPIIDVTDESQLPKPATITLRREK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G VP E IL RLG V + + ++ VPSWR D+E + DLVEE+ RIYG + Sbjct: 413 LDRLIGHHVPDEQVGDILTRLGCKVTVQENCWQAVVPSWRFDMEIEEDLVEEVARIYGYN 472 Query: 471 QIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I P+ V K +LSL++ VK +L R E + +SF+ + L Sbjct: 473 NIPDVPMRADLVMKKHREADLSLKR-----VKTMLVDRGYQEAITYSFVDPKIQALLHPQ 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQ 584 Q+ L + NPISADMS MR SLL GLL N +R +FE + EN + + Sbjct: 528 QQALMLPNPISADMSAMRLSLLTGLLTTVVYNQNRQQNRVRLFETGLRFVPDENAEQDIR 587 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + G G+ R S E+ + VD FD K D +V+E L + F + Sbjct: 588 QELVLG------GVITGNRFEEHWSLEK-QSVDFFDMKGDLEAVLELTGKLSKISFRADV 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I E + GY G HP + L+ FEV + + K Sbjct: 641 NPALHPGQSAGIYLENEYI-GYIGVVHPELERKLDLNGRTVVFEVLWNKLADCVIPDAK- 698 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 +S +RD+A +V +++ A ++ K V I + +FDV+ GK + EG K Sbjct: 699 ----EVSRFPSNRRDIAIVVPENVAAEDVLVECKKVGVNHIVGINLFDVYCGKGVAEGHK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI ++Q T +++I +++ V + ++ A LR Sbjct: 755 SLAISFILQDTARTLEEEEIAATVNKCVAVLKQRFQASLR 794 >gi|268592572|ref|ZP_06126793.1| phenylalanyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] gi|291311986|gb|EFE52439.1| phenylalanyl-tRNA synthetase, beta subunit [Providencia rettgeri DSM 1131] Length = 795 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 432/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E + D +T GLEV+ VD + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEALSDQITMAGLEVDGVDAVAGQFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DA +G + +YL+L D I++S+TPNR+DC+ + G+A D+ Sbjct: 120 CSYSELGISDDHSGIIELPQDATIGTDIREYLKLDDNAIEISITPNRADCLSILGVARDV 179 Query: 179 VAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 L E IN + ++ P+ + + + C F +K + + P WM+ Sbjct: 180 AVINKLALNEPVINAVSATTKDTFPIRV----EAPNACPRFLGRVIKNIDVSAPTPMWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI A+VDITNYV L+ G P H +D R+ + R A GEK++ LD E Sbjct: 236 EKLRRGGVRSIDAVVDITNYVLLELGQPQHAYDLDRLDGAIVARMAKEGEKLVLLDGSEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + + IAGI GG+H+G + T ++L+E A +DP++I +N G+ TD Sbjct: 296 TLKSDTLVIADESKALGIAGIFGGEHSGVNTETKNILLECAFFDPLSITGRARNYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD Q ++ +LI+ +CGG +I + + P+ I +++ R Sbjct: 356 ASHRFERGVDPQLQFKAIERATALIVEICGGEVGEIIDVTSEQHLPKAANIKLTRNKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + E IL RLG V + ++V PSWR D++ + DLVEE+ R+YG + I Sbjct: 416 LIGHFIEDELVTDILTRLGCKVTVSANTWDVVAPSWRFDMQIEEDLVEEVARVYGYNSIP 475 Query: 474 SEPL--PLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 PL LT K NL L++ +K +L R E + +SF+ + L Q Sbjct: 476 DVPLRADLTMTNHKEANLPLKR-----IKAMLVDRGYQEAITYSFVDPKVQALLHPQQDA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + NPIS DMS MR SLL GLL N +R +FE + + +N G Q+ Sbjct: 531 LLLPNPISVDMSAMRLSLLTGLLGTVVYNQNRQQNRIRLFETGLRFIPDNQAEYGIRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWS-DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ E WS DK + VD FD K D +V E L+ + F+S A Sbjct: 591 MLAGVITGNRFEEH----WSLDK-----QVVDFFDLKGDLEAVFELTGKLNQITFKSEAH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I E + G+ G HP + L+ FEV D+ I+Q+ + K Sbjct: 642 PALHPGQSAGIYLENEHI-GFIGVVHPELERKLDLNGRTVVFEVRSDA--IAQRVIPEAK 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 + S +RD+A +V + + A ++ K V I + +FDV+ G+ + +G KS Sbjct: 699 AISRYPS---NRRDIAVVVPEDVAAAEVLAECKKVGINHIVGINLFDVYCGEGIADGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI ++ Q + T +++I +D + + ++ A LR Sbjct: 756 LAISLVFQDTQRTMEEEEITATVDLCIAALKQRFQASLR 794 >gi|323526731|ref|YP_004228884.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1001] gi|323383733|gb|ADX55824.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1001] Length = 811 Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust. Identities = 274/845 (32%), Positives = 435/845 (51%), Gaps = 77/845 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENN--MIVNVRK 108 D + +++ G + +VCGAPNV V L+G PP E + + K Sbjct: 59 ADKLNVCQVNAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + ++ LP D P+G + + L L D I ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLLILPDDTPIGQDIRETLNLDDTIFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCV 222 + V G+A + A L+ ++I P+++K D + LC F+ + Sbjct: 176 LSVFGVARETSAITGAPLRPLDIK--------PVQVKLDETLPVRISAPDLCGRFSGRVI 227 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 +GV +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR Sbjct: 228 RGVNARAKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGSMEVRWG 287 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + L+ +L VIA D I+S+AGI+GG +TT++ +E A W P Sbjct: 288 RKGETLKLLNGNTVELDETVGVIADDRHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPD 347 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +I + TD+ +RFERGVD + ++ I LIL +CGG A + + + Sbjct: 348 SIRGRSRKYNFSTDAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVD-DQIVNVPQ 406 Query: 402 RKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 R+ V M S R+ G+ + ++ +I RLG + D F V+ PS+R D+E + DL+ Sbjct: 407 RQAVKMRVSRANRIIGVAIGADEIAQIFTRLGLPFERDGDTFSVTPPSYRFDIEIEEDLI 466 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RIYG ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E Sbjct: 467 EEVARIYGFEKIPARP-PVAKSEMRATHETRRS-IHTLRHALAARDYAETVNFSFVDAEW 524 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYEND 579 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 525 EQDFAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRTADRVRVFEAGRVFLHD 584 Query: 580 TPEGQKYMAAGIRKGSSGIEG-------SGRLWSDKSEER----CRFVDLFDAKADALSV 628 I+ G +EG G + EE+ R VD FD KAD ++ Sbjct: 585 ---------PSIKAGELTVEGFAQPKMIGGLAYGPALEEQWGAPARTVDYFDVKADVEAL 635 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + P V+ RF HPGRS I+ + +G+ GE HP + + L + FE Sbjct: 636 LAPAVA----RFVKAEHPALHPGRSARIELNGR-AIGWIGELHPRWMQQYDLPHAPILFE 690 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RL 743 + D+ + Q+ +V S PV+RD+A +VDQ I L++ ++ + Sbjct: 691 LEADA--LMQRVLPTPSEV---SKFPPVRRDIAVVVDQKIEVQALLDELQKAQSEPACKT 745 Query: 744 IDDVTVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + V +FD F+ KS L +KS+A +V +Q T +D+ + + + +VE + + Sbjct: 746 VQRVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVY 805 Query: 799 NAVLR 803 A LR Sbjct: 806 GARLR 810 >gi|113867362|ref|YP_725851.1| phenylalanyl-tRNA synthetase subunit beta [Ralstonia eutropha H16] gi|113526138|emb|CAJ92483.1| Phenylalanyl-tRNA synthetase beta chain [Ralstonia eutropha H16] Length = 815 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 275/844 (32%), Positives = 443/844 (52%), Gaps = 71/844 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNP 56 M+F+ SWL+ + + +S + + TLT GLEVE+V + PF + +VLS ER+P Sbjct: 1 MQFSESWLRTFANPEKISTDALSHTLTMAGLEVEEVGS--VAPPFDRVVVARVLSTERHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIR 110 + D + ++D G + +Q+VCGAPNV+ G+L A G+ +P + + + K+R Sbjct: 59 NADRLNVCQVDAGTGETLQIVCGAPNVKPGILVPCALVGAVLPPSEDGGKPFEIKIGKLR 118 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS +EL LS+D +M LP DAPVG + YL+L D + + LTPN++DC+ Sbjct: 119 GVDSYGMLCSARELKLSEDHGGLMVLPEDAPVGQDIRQYLDLDDQVFVIKLTPNKADCLS 178 Query: 171 VRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + G+A ++ A L ++K + ++ + +P+++ LC F+ ++GV Sbjct: 179 IHGVAREVSALTGAALNLPEMKPVPVTI---QDKLPVKVS----APDLCGRFSGRVIRGV 231 Query: 226 RNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 A P WM QRL+ G RS+SALVDI+NYV L+ G PSHVFD S+I L VR G Sbjct: 232 NARAATPAWMVQRLERSGQRSVSALVDISNYVMLELGRPSHVFDLSKIHGGLDVRWGRKG 291 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E+I L+ ++ VIA D I+S+AGI+GG +TTD+ +E A W P I Sbjct: 292 EQIKLLNGNTIEVDEQVGVIADDKEIESLAGIMGGDSTAVTLDTTDIYLEAAFWWPAAIQ 351 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 G+ TD+ +RFERGVD + ++ I +LIL +CGG A + + RK Sbjct: 352 GRGRRYNFSTDAGHRFERGVDYATTVEHIERITALILEICGGQAGPVD-DHVVNLPQRKP 410 Query: 405 VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKADL 459 V + + +R+ GI++ + +RL E + FEV+ PS+R D+E + DL Sbjct: 411 VSLRVARAERVLGIELSSAAIADVFQRLQLPFTRTQGAEGEVFEVTPPSYRFDIEIEEDL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ RIYG ++I + P P+ + E + ++S + V+ +A+R EV+N++F+ ++ Sbjct: 471 IEEVARIYGFERIPARP-PIAESEMRPTNEARRS-SHVVRHAVAARDYQEVINFAFVEEK 528 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 F + +LNPI++ ++ MR++L+ GL+ N++R A +FEV V+ D Sbjct: 529 WERDFAANDNPIRLLNPIASQLAVMRSTLIGGLVDKVRYNLNRKAARVRLFEVGRVFHRD 588 Query: 580 --------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 T G Q MAAGI G + E W + R VD FD K D ++ Sbjct: 589 ASVKDGGLTVAGYDQPMMAAGIAYGPAFEE----QWGIPA----RNVDFFDIKGDVEALF 640 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P V RFE + HPGR+ + + V G GE HP L + L++ FE+ Sbjct: 641 HPRVP----RFEPVSHPALHPGRAARVLLDGKAV-GVVGELHPRWLQEYELTHAPVVFEL 695 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK------NVDRL 743 LD++ + T +S RDLA +V Q + L++ ++ R Sbjct: 696 ALDAL-----RDTGLPLYTEISKFPAAVRDLAVVVKQSVRVQDLLDAMRAALEKQGYGRY 750 Query: 744 IDDVTVFDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + VFD F+ K ++G +KS+A +V +Q T +D+ + + +V+ + + Sbjct: 751 CQSLVVFDEFRPKGASAAIGADEKSLAFRVTLQDTGSTLQDETVDSAVRCMVDALTEAFQ 810 Query: 800 AVLR 803 A LR Sbjct: 811 ARLR 814 >gi|227885865|ref|ZP_04003670.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli 83972] gi|300994424|ref|ZP_07180929.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|301050950|ref|ZP_07197799.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|30316194|sp|P59664|SYFB_ECOL6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|222033469|emb|CAP76210.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli LF82] gi|227837438|gb|EEJ47904.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli 83972] gi|300297404|gb|EFJ53789.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 185-1] gi|300406270|gb|EFJ89808.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 45-1] gi|307553735|gb|ADN46510.1| phenylalanine tRNA synthetase, beta-subunit [Escherichia coli ABU 83972] gi|312946314|gb|ADR27141.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O83:H1 str. NRG 857C] gi|315290474|gb|EFU49848.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 153-1] Length = 795 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|113461004|ref|YP_719071.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus somnus 129PT] gi|112823047|gb|ABI25136.1| phenylalanyl-tRNA synthetase beta subunit [Haemophilus somnus 129PT] Length = 795 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 264/822 (32%), Positives = 441/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++C+ +T +GLEV+ + A + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAISTEQLCEQITMLGLEVDDIAKVAADFTGVVVGEVVECAKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNIGGERLLDIVCGAPNCRKGLKVACAIDGAILP-GNFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +++DS+ I+ELP +AP+G L +YL L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFNELGINEDSSGIIELPQNAPIGVNLREYLTLNDNNIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + ++ ++ P SI ++ ++ C + + VK + V P W+ Sbjct: 180 -----GVVNKLELNSPHFEPVKASIKDKVTIEVLAPEACPRYLLRVVKNINVKVDTPMWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNY+ L+ G P H FD ++++ + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPVVDITNYILLELGQPMHAFDMAKVTQPVQVRMAKQGEELVLLDGST 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + ++IA ++AGI GG+ +G + T DV++E A + P+ IA + G+ T Sbjct: 295 AKLKENTLIIADQEGPLAMAGIFGGQASGVNAETKDVILEAAFFAPLAIAGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 DS +RFERGVD + ++ +L++ +CGG A +IC A + + P ++I +++ Sbjct: 355 DSSHRFERGVDFELAHKAMERATALLIQICGGDAGEICEALSEAHLPKVKQIQLRRTKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E I +RLGF+V D + V+ SWR D+E + DL+EE+ RIYG + I Sbjct: 415 TLLGHHIETETVTDIFQRLGFAVEYANDVWTVTSASWRFDIEIEEDLIEEVARIYGYNVI 474 Query: 473 -KSEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + PL Q+++ ++ L L + RT +V E++++SF+ + L Sbjct: 475 PNNAPLAHLQMKELPEKLLDLNRIRTAFV-----DSDYQEIISYSFVDPDIQKLLHPELD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPIS +MS MR SLLPGLL A N +R +FE + DT Q+ Sbjct: 530 ALVLPNPISKEMSAMRLSLLPGLLSAVAYNQNRQQNRIRLFEAGLRFVPDTTAECGIRQE 589 Query: 586 YMAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Y+ G+ I G R W K E VD FD K D ++ LRF + Sbjct: 590 YVIGGV------IVGDKRPVHWEQKGEH----VDFFDLKGDLEHILSLTHVGHRLRFVAK 639 Query: 644 APSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPG+S I+ + EI G+ G HP I+ LS F++ ++I Sbjct: 640 SYPALHPGQSAEILLDNKEI--GFIGTVHPKIVQKLDLSGKPIVFQIEWNAI-----SEC 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S KRDLA +VD + AG ++ + + V + + +V +FDV+QG +L Sbjct: 693 NVPTAQEISRFPANKRDLAIVVDADVVAGEVLEVCRAVGGKQLINVNLFDVYQGVNLPAD 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ ++IQ + T + DI ++ ++ + + NA LR Sbjct: 753 KKSLALSLMIQDTEKTLEEKDINAVISVVLSALQQNFNAYLR 794 >gi|163801053|ref|ZP_02194953.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio sp. AND4] gi|159175402|gb|EDP60199.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio sp. AND4] Length = 806 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 268/829 (32%), Positives = 422/829 (50%), Gaps = 50/829 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS +++ +T GLEV+ V + + + KV+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDVLPVAGSFTGVKVGKVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + SI ++ ++ + C + VK V P WM Sbjct: 180 -----GVLNRADVTEPSVEAVAASIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD E Sbjct: 235 QEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ T Sbjct: 295 AELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVK 412 DS RFERGVD + ++ L++ +CGG + + + KP K+ +++ Sbjct: 355 DSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVTLRRTKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSV-----IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 L G + D + ILERLG +V + + + P+WR D+ + DL+EE+ RIY Sbjct: 415 NLLGHHIVDTDVVEILERLGLTVETTALANQERGWTATAPTWRFDIAIEQDLIEEVGRIY 474 Query: 468 GVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L Sbjct: 475 GYDNIPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVP 531 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPE 582 G L + PISADMS MR L+ GLL N R +FE + + Sbjct: 532 GVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGM 591 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-- 640 Q+ M AG+ G+ S W ++ VD FD K D +V+E + + F Sbjct: 592 RQEPMLAGVIAGTR----SEEHWDIET----NTVDFFDLKGDLEAVLELTANEAAYSFAA 643 Query: 641 ----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 644 LSAEDKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI-- 700 Query: 697 SQKKRTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQ 754 TK + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ Sbjct: 701 ----NTKVIPEAVQLSKYPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYV 756 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK + EGKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 757 GKGVEEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 805 >gi|253700843|ref|YP_003022032.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter sp. M21] gi|251775693|gb|ACT18274.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sp. M21] Length = 801 Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust. Identities = 279/825 (33%), Positives = 440/825 (53%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D D+ ++ LT +GLEVE+++ + + +VL ++P+ D Sbjct: 1 MIVTYNWLKEFVDCDLPAAELSHLLTMLGLEVERMEELGGGMDDVVVAQVLEKNQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + + VVCGA N + G A G+ +P + + KIRG ES GM+ Sbjct: 61 KLSLCKVDNGK-EILNVVCGAQNFKAGDKVALAQIGATLP-GDFKIKRSKIRGEESCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL LS +SA IM LP +G L D L D I ++ LTPNR+DC+ V GIA + Sbjct: 119 CSEKELALSLESAGIMILPEAFKIGTPLFDALGTKDTIFEIGLTPNRADCLSVVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEI--KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +AA LGK K ++ P+E ++ LC + + G +P W+ Sbjct: 178 IAAKLGK-KVHYPGLEVAETGAPVETIASVTIEAPELCPRYTARHITGCTLAPSPAWLAN 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEY 295 RL+A G+RSI+ +VD+TNYV L+ G+P H FD ++ + V A GEK + LD QE Sbjct: 237 RLQAAGIRSINNVVDVTNYVLLEYGHPLHAFDFKLVAGGKIVVAAAGEGEKFVTLDGQER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ ++ I + ++AGI+GG ++ + TT+VL+E A + P I ++ K LGI T+ Sbjct: 297 ILTSSDLTIRDAEKAVALAGIMGGGNSEIGERTTEVLLESAYFTPSAIRKTSKRLGIHTE 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRL 414 S +RFERG DL G+ L LI L GG A + +PR I + + + Sbjct: 357 SSHRFERGTDLAGLTRALDRAAQLIAELSGGKIAKGVIDVYPHPVEPRVIKARLARINAV 416 Query: 415 SGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 SG+ + + ILERL F V E F+V VP +R D+E + DLVEE++R+ G +++ Sbjct: 417 SGLSLSAAEVQDILERLEFEVKQPEPGVFQVRVPLFRVDLEREIDLVEEVVRLNGFEKLP 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI---SKEQSVLFGGGQRE 530 + LP V Q+ R VK +L S+ + EV+N+SF+ S E+ +L R Sbjct: 477 AT-LPQASVFSDLPSDFQRLAAR-VKDLLVSQGLSEVINYSFVAPASCEKILLSADDVRS 534 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 + +LNPIS ++S MRT++LPGLL +N+ + IFE+ +Y + PE Sbjct: 535 NGMVLLNPISDELSVMRTTMLPGLLDTAVKNISFRTLNLRIFEMRRIYLPAPGKELPEEP 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE----PFVSLDSLRF 640 Y++A + GS +EG W+ + E +D FD K A +V+ P VS + Sbjct: 595 LYVSA-LLTGSRDLEG----WNQQKGE----IDFFDVKGIAENVLGDLSIPNVSFST--- 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ES P +YHPG++ I + VLG GE HP + + +G+ P+ E+ +++ S+K Sbjct: 643 ESLDP-YYHPGKACRILCGNK-VLGSLGELHPTVQENYGIGTPLYYLELNFEALLASRKG 700 Query: 701 RTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSL 758 K + S P RD+A ++ + +P ++ +K V ++ V VFD++ G ++ Sbjct: 701 ----KGAAQVPSRFPSTFRDIAMLLPKELPVADVLYCVKGVKAPELEGVEVFDLYTGGNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KSVAI+V + T DD++ L R+ + + KK N R Sbjct: 757 SAAEKSVAIRVRYGSKERTLTDDEVTRLHQRVTDALTKKLNVSFR 801 >gi|323186895|gb|EFZ72213.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli RN587/1] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHISDEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|170681705|ref|YP_001743535.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli SMS-3-5] gi|170519423|gb|ACB17601.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli SMS-3-5] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD++ +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDISVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|118497474|ref|YP_898524.1| phenylalanine tRNA synthetase, beta-subunit [Francisella tularensis subsp. novicida U112] gi|195536167|ref|ZP_03079174.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] gi|118423380|gb|ABK89770.1| phenylalanine tRNA synthetase, beta-subunit [Francisella novicida U112] gi|194372644|gb|EDX27355.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. novicida FTE] Length = 790 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 271/812 (33%), Positives = 428/812 (52%), Gaps = 40/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L+ + + + DTLT GLEV+ +++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLNDTQTSQDLADTLTLAGLEVDAIESVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP++APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVNAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKDLEILEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDSDTLVIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI +++ + Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQVKINLSINKLNHV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + L R E +N+SFI + F R + Sbjct: 478 -PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG+ Sbjct: 535 IQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ L SL FE +W HP Sbjct: 595 AYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I ++ + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 643 GQSAYILANSNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK--- 696 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ I+ ++ ++ DV++FD+++ + +KS+A+ Sbjct: 697 -ISKYPSVSRDISFLVDKSVLAGDIIKAIRALNINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L Q T D I +D+++E + K N Sbjct: 754 NMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|300924755|ref|ZP_07140697.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|301327443|ref|ZP_07220678.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] gi|300419043|gb|EFK02354.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 182-1] gi|300845955|gb|EFK73715.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 78-1] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRRKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|110641835|ref|YP_669565.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli 536] gi|191171674|ref|ZP_03033221.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli F11] gi|218689658|ref|YP_002397870.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli ED1a] gi|300987620|ref|ZP_07178292.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|110343427|gb|ABG69664.1| phenylalanyl-tRNA synthetase beta chain [Escherichia coli 536] gi|190908004|gb|EDV67596.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli F11] gi|218427222|emb|CAR08011.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli ED1a] gi|300306100|gb|EFJ60620.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 200-1] gi|324011507|gb|EGB80726.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 60-1] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|293410029|ref|ZP_06653605.1| phenylalanyl-tRNA synthetase [Escherichia coli B354] gi|291470497|gb|EFF12981.1| phenylalanyl-tRNA synthetase [Escherichia coli B354] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDISNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|82777061|ref|YP_403410.1| phenylalanyl-tRNA synthetase subunit beta [Shigella dysenteriae Sd197] gi|91208137|sp|Q32FI6|SYFB_SHIDS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|81241209|gb|ABB61919.1| phenylalanine tRNA synthetase, beta-subunit [Shigella dysenteriae Sd197] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACSRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATCLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA L K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAVDILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|215486932|ref|YP_002329363.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O127:H6 str. E2348/69] gi|312966916|ref|ZP_07781134.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 2362-75] gi|215265004|emb|CAS09390.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O127:H6 str. E2348/69] gi|312288380|gb|EFR16282.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli 2362-75] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSNALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|238919787|ref|YP_002933302.1| phenylalanyl-tRNA synthetase subunit beta [Edwardsiella ictaluri 93-146] gi|238869356|gb|ACR69067.1| phenylalanyl-tRNA synthetase, beta subunit, putative [Edwardsiella ictaluri 93-146] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 266/824 (32%), Positives = 432/824 (52%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECHQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVSVGGERLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G L +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGICEDHSGIIELPQDAPIGCDLREYLQLNDNAIEISVTPNRADCLGILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA---PN 232 L + ++ P ++ SI ++ C + V+G+ +VA P Sbjct: 180 AV-----LNRLPLNMPQAAPVAASIDERFPIAVEAPEACPRYLGRVVRGI--DVAAKTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM ++L+ G+RSI +VD+TNYV L+ G P H FD +R+ + VR A GE + LD Sbjct: 233 WMSEKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLNRLQGGIVVRMARDGETLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + L D +VIA + ++ GI GG+H+G + T DVL+E A ++P+ I + G+ Sbjct: 293 SQATLGSDTLVIADHQQALALGGIFGGEHSGVNAETRDVLLECAYFNPLAITGRARRYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSE 410 TD+ +R+ERGVD Q ++ L+L+LCGG A + N Y +P IV S+ Sbjct: 353 HTDASHRYERGVDPQLQQRAMERATELLLALCGGQAGPVMDVTNDAYLPQPANIVLQRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + L IL+RLG V ++ PSWR D+ + DL+EE+ R+YG + Sbjct: 413 LDRLIGHHIDDVQVLDILQRLGCQVTAVDGGWQAVAPSWRFDMAIEEDLIEEVARVYGYN 472 Query: 471 QIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I PL + + NL L++ VK +L R E + +SF+ + L Sbjct: 473 NIPDVPLRADLVMTAHREANLPLKR-----VKTLLVDRGYQEAITYSFVDPKVQALLHPQ 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 Q+ L + NPIS DMS MR SL GLL A N +R + +FE + D EG Sbjct: 528 QQALILPNPISVDMSAMRLSLWTGLLGAVVYNQNRQQSRVRLFESGLRFVPD--EGANLG 585 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q M AG+ G E G ER + VD +D K D +V+E LD+++F Sbjct: 586 IRQDVMLAGVIAGHRDEEHWGI-------ER-QAVDFYDLKGDLEAVLELTGKLDAVQFR 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + A HPG+S + E + G+ G HP + L+ FEV + ++++ Sbjct: 638 AEAHDALHPGQSAALYLHGERI-GFIGVVHPELERKLDLNGRTVVFEVCWSA--LAERLI 694 Query: 702 TKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLG 759 + +++ S +P +RD+A +V +++ A ++ K V + V +FDV+ GK + Sbjct: 695 PQAREI----SRYPANRRDIAVVVAENVSAEDVLAECKKVGANQVVGVNLFDVYCGKGVA 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+AI +++Q T + +I + + VE + ++ A LR Sbjct: 751 EGHKSLAISLVLQDTTRTLEEVEIAATVAKCVEALKQRFQASLR 794 >gi|170717572|ref|YP_001784658.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus somnus 2336] gi|168825701|gb|ACA31072.1| phenylalanyl-tRNA synthetase, beta subunit [Haemophilus somnus 2336] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 265/822 (32%), Positives = 440/822 (53%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++C+ +T +GLEV+ + A S + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAISTEQLCEQITMLGLEVDDIAKVAADFSGVVVGEVVECAKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNIGGERLLDIVCGAPNCRKGLKVACAIDGAILP-GNFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +++DS+ I+ELP +AP+G L +YL L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFNELGINEDSSGIIELPQNAPIGVNLREYLTLNDNNIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G + ++ ++ P SI ++ ++ C + + VK + V P W+ Sbjct: 180 -----GVVNKLELNSPHFEPVKASIKDKVTIEVLAPEACPRYLLRVVKNINVKVDTPMWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L G+RSI +VDITNY+ L+ G P H FD ++++ + VR A GE+++ LD Sbjct: 235 QEKLHRCGIRSIDPVVDITNYILLELGQPMHAFDMAKVTQPVQVRMAKQGEELVLLDGST 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + ++IA ++AGI GG+ +G + T DV++E A + P+ IA + G+ T Sbjct: 295 AKLKENTLIIADQEGPLAMAGIFGGQASGVNAETKDVILEAAFFAPLAIAGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 DS +RFERGVD + ++ +L++ +CGG A +IC A + + P ++I +++ Sbjct: 355 DSSHRFERGVDFELAHKAMERATALLIQICGGDAGEICEALSEAHLPKVKQIQLRRTKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + E I +RLGF+V D + V+ SWR D+E + DL+EE+ RIYG + I Sbjct: 415 TLLGHHIETETVTDIFQRLGFAVEYANDVWTVTSASWRFDIEIEEDLIEEVARIYGYNVI 474 Query: 473 -KSEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + PL Q+++ ++ L L + RT +V E++++SF+ + L Sbjct: 475 PNNAPLAHLQMKELPEKLLDLNRIRTAFV-----DSDYQEIISYSFVDPDIQKLLHPELD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QK 585 L + NPIS +MS MR SLLPGLL A N +R +FE + DT Q+ Sbjct: 530 ALVLPNPISKEMSAMRLSLLPGLLSAVAYNQNRQQNRIRLFEAGLRFIPDTTAECGIRQE 589 Query: 586 YMAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Y+ G+ I G R W K E VD FD K D ++ LRF + Sbjct: 590 YVIGGV------IVGDKRPVHWEQKGEH----VDFFDLKGDLEHILSLTHVGHRLRFVAK 639 Query: 644 APSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPG+S I+ + EI G+ G HP I+ LS F++ ++I Sbjct: 640 SYPALHPGQSAEILLDNKEI--GFIGTVHPKIVQKLDLSGKPIVFQIEWNAI-----SEC 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 +S KRDLA +VD + AG ++ + + V + + +V +FDV+QG +L Sbjct: 693 NVPTAQEISRFPANKRDLAIVVDADVVAGEVLEVCRAVGGKQLINVNLFDVYQGVNLPAD 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+ ++IQ + T + DI ++ ++ + + NA LR Sbjct: 753 KKSLALSLMIQDTEKTLEEKDINAVISVVLSALQQNFNAYLR 794 >gi|218699719|ref|YP_002407348.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli IAI39] gi|300938953|ref|ZP_07153654.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] gi|218369705|emb|CAR17474.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli IAI39] gi|300456152|gb|EFK19645.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 21-1] Length = 795 Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDISNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|323978103|gb|EGB73189.1| phenylalanyl-tRNA synthetase [Escherichia coli TW10509] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIANEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQANLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLADVEFRAQANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|307730397|ref|YP_003907621.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia sp. CCGE1003] gi|307584932|gb|ADN58330.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1003] Length = 811 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 275/845 (32%), Positives = 434/845 (51%), Gaps = 77/845 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVR--K 108 D + +++ G + +VCGAPNV V L+G PP E +R K Sbjct: 59 ADKLNVCQVNAGTGAALNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIRLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D I ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTIFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCV 222 + V G+A + A L+ + I P+E+K D + LC F+ + Sbjct: 176 LSVFGVARETSAITGAPLRPLEIK--------PVEVKLDETLPVKISAPDLCGRFSGRVI 227 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 +GV +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR Sbjct: 228 RGVNARAKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWG 287 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + L+ +L VIA + I+S+AGI+GG +TT++ +E A W P Sbjct: 288 RKGETLKLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPD 347 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +I + TD+ +RFERGVD + ++ I LIL +CGG A + + + Sbjct: 348 SIRGRSRKYNFSTDAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVD-DQVVNVPK 406 Query: 402 RKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 R+ V M S R+ G+ + ++ +I RLG + D F V PS+R D+E + DL+ Sbjct: 407 REPVKMRVSRANRIIGVAIGADEIAQIFTRLGLPFERDGDTFSVMPPSYRFDIEIEEDLI 466 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RIYG ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E Sbjct: 467 EEVARIYGFEKIPARP-PVAKSEMRATNETRRS-IHTIRHTLAARDYAETVNFSFVDAEW 524 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYEND 579 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 525 EQDFAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLHD 584 Query: 580 TPEGQKYMAAGIRKGSSGIEG-------SGRLWSDKSEER----CRFVDLFDAKADALSV 628 I+ G +EG G + EE+ R VD FD KAD ++ Sbjct: 585 ---------PSIKAGELTVEGFAQPKMIGGLAYGPALEEQWGAPARTVDYFDVKADVEAL 635 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + P V+ RF HPGRS I+ + +G+ GE HP + + L + FE Sbjct: 636 LAPAVA----RFVKAEHPALHPGRSARIELNGR-AIGWIGELHPRWMQKYDLPHAPILFE 690 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RL 743 + D++ ++ T + +S PV+RD+A +VDQ I L++ ++ + Sbjct: 691 LEADAL---MQRVLPTP--LEVSKFPPVRRDIAVVVDQKIEVQALLDELQAAQSEPACKT 745 Query: 744 IDDVTVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + V +FD F+ KS L +KS+A +V +Q T +D+ + + + +VE + + Sbjct: 746 VQKVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVY 805 Query: 799 NAVLR 803 A LR Sbjct: 806 GARLR 810 >gi|191167858|ref|ZP_03029663.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli B7A] gi|309793483|ref|ZP_07687910.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|190902117|gb|EDV61861.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli B7A] gi|308123070|gb|EFO60332.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 145-7] gi|320197897|gb|EFW72505.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli EC4100B] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVEAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|91210927|ref|YP_540913.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli UTI89] gi|117623889|ref|YP_852802.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli APEC O1] gi|218558583|ref|YP_002391496.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli S88] gi|237705661|ref|ZP_04536142.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|91072501|gb|ABE07382.1| phenylalanyl-tRNA synthetase beta chain [Escherichia coli UTI89] gi|115513013|gb|ABJ01088.1| phenylalanyl-tRNA synthetase beta chain [Escherichia coli APEC O1] gi|218365352|emb|CAR03073.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli S88] gi|226900418|gb|EEH86677.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia sp. 3_2_53FAA] gi|294490129|gb|ADE88885.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli IHE3034] gi|307626800|gb|ADN71104.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli UM146] gi|315286438|gb|EFU45873.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 110-3] gi|323952221|gb|EGB48094.1| phenylalanyl-tRNA synthetase [Escherichia coli H252] gi|323956615|gb|EGB52353.1| phenylalanyl-tRNA synthetase [Escherichia coli H263] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLRGWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 + L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVSNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 DADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|320181258|gb|EFW56177.1| Phenylalanyl-tRNA synthetase beta chain [Shigella boydii ATCC 9905] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHTFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|256018093|ref|ZP_05431958.1| phenylalanyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|300904569|ref|ZP_07122406.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|301306644|ref|ZP_07212703.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|332279136|ref|ZP_08391549.1| phenylalanyl-tRNA synthetase subunit beta [Shigella sp. D9] gi|300403482|gb|EFJ87020.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 84-1] gi|300838106|gb|EFK65866.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 124-1] gi|315257482|gb|EFU37450.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 85-1] gi|332101488|gb|EGJ04834.1| phenylalanyl-tRNA synthetase subunit beta [Shigella sp. D9] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|324113465|gb|EGC07440.1| phenylalanyl-tRNA synthetase [Escherichia fergusonii B253] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 261/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTNIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNDATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLADVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|208779271|ref|ZP_03246617.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella novicida FTG] gi|208745071|gb|EDZ91369.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella novicida FTG] Length = 790 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 271/812 (33%), Positives = 427/812 (52%), Gaps = 40/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L+ + + + DTLT GLEV+ +++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLNDTQTSQDLADTLTLAGLEVDAIESVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP++APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVNAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKDLEILEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDSDTLVIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI +++ + Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQVKINLSINKLNHV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + L R E +N+SFI + F R + Sbjct: 478 -PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG+ Sbjct: 535 IQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGTCFKLQDNQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ L SL FE +W HP Sbjct: 595 AYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 643 GQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK--- 696 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ I+ ++ ++ DV++FD+++ + +KS+A+ Sbjct: 697 -ISKYPSVSRDISFLVDKSVLAGDIIKAIRALNINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L Q T D I +D+++E + K N Sbjct: 754 NMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|84387106|ref|ZP_00990128.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] gi|84377967|gb|EAP94828.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio splendidus 12B01] Length = 795 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 268/819 (32%), Positives = 422/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV+ V+ + FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGV--FTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P + + K+RG+ S G Sbjct: 59 ADKLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GDFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI + ++ + C + VK V +P Sbjct: 178 EV-----GVLNRADVTEPAVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPI 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + +IAGI GG+ +G TTDVL+E A + P +I + G+ Sbjct: 293 NEAELNSNTLVIADQNKALAIAGIFGGQDSGVTTETTDVLLEAAFFAPDHIRGRARAYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + + + P+ + ++ Sbjct: 353 HTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRAK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G ++P D + IL RLG V + + PSWR D+ + DL+EE+ RIYG D Sbjct: 413 LDSLLGHEIPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ D + + R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQAPKAALKMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QK 585 L + PISADMS MR L+ GLL N R + +FE + + E G Q+ Sbjct: 530 PLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQSRVRLFEFGLRFIPEATAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W + VD FD K D +V+E + + F+S Sbjct: 590 MMLAGVISGTRGEEH----WDMAT----NTVDFFDLKGDLEAVLELSANEIAYSFKSAKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I + V G G HP + FGL+ FE+ +I Sbjct: 642 PALHPGQTAAIVVDGKEV-GIIGTVHPELERKFGLNGRTIVFEIEWAAI-----NTRVLP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + V +S +RD+A +VD+ + +G +V I + +FDV+ G+ + EGKKS Sbjct: 696 EAVAVSKFPANRRDIAVVVDEAVASGDIVEACIAAGGEFLTGAKLFDVYVGQGVEEGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q ++ T D DI +D IV ++ +K A LR Sbjct: 756 LAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALR 794 >gi|323493760|ref|ZP_08098879.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] gi|323311994|gb|EGA65139.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio brasiliensis LMG 20546] Length = 801 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 269/825 (32%), Positives = 417/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +N P + + +E+K ++ C + VK V P W Sbjct: 178 EVGVLNRADVTEPAVNPVAPAIDDQVSIEVKA----TAACPRYLGRIVKNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTIETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TDS RFERGVD + ++ L++ +CGG + + + P+ + +++ Sbjct: 354 TDSSMRFERGVDYALQVNAMERATELLVEICGGEVAPVVAVESQADLPKANTVALRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 414 DSLLGHHIADSDVVEILERLGLTVETTESGWTATAPTWRFDIAIEQDLIEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVPGVEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L + PISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 531 LILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ 640 M AG+ G+ S W ++ VD FD K D +V+E + + F Sbjct: 591 MLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANEQAYSFAALTAE 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 E A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 643 EKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 TK + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + Sbjct: 696 NTKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACVEQGGEFLKDARLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSDKFGASLR 800 >gi|325294827|ref|YP_004281341.1| phenylalanyl-tRNA synthetase beta chain [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065275|gb|ADY73282.1| Phenylalanyl-tRNA synthetase beta chain [Desulfurobacterium thermolithotrophum DSM 11699] Length = 794 Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust. Identities = 270/824 (32%), Positives = 448/824 (54%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M+ T +WLK+ ++ D+S ++I + LT +G+EV+ V E L K++ + ++P+ Sbjct: 1 MRITYNWLKEFINIEDLSAQEIANILTDVGIEVDSVRYAAENLEKVVTGKIVEITKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR----KIRGIE 113 D I ++D G ++ +Q+V GA NV G + A GS +P + VR K+RG+ Sbjct: 61 DKLKICQVDVG-NEVLQIVTGADNVFEGAVVPVALHGSKLP-----IGVRIKRSKLRGVV 114 Query: 114 STGMMCSEKELMLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CSE+EL L+D S+S IM LP + +G + + L L D II+ +T NR D + + Sbjct: 115 SNGMLCSEEELGLTDSSSSGIMILPDNVEIGKDVKEVLSLDDWIIEYEITTNRPDALSIL 174 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA +L A +K + E + DS C + +KG+ N +P Sbjct: 175 GIARELKAVLNRPVKLPQNDFKEGNFEAKEEASLSVLDSGACLRYDGFILKGIENKPSPL 234 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALD 291 +M+ RL VGLR I+A+VD+TNYV + G P H FD ++S + VRRA GE I+ LD Sbjct: 235 FMQIRLYLVGLRPINAVVDVTNYVMYELGQPLHAFDLEKLSGREIIVRRAKDGETIVTLD 294 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E L+ D++VIA + ++AG++GG+ +G +T ++ +E A ++P+ I ++ K L Sbjct: 295 GVERKLTQDDLVIADAEKAVAVAGVMGGEESGTSLSTKNIFLESAHFEPMTIRKTSKRLS 354 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYKPRKIVFMNSE 410 + TDS YRFERG D++ + + LI CGG + ++ Y P+ IVF + Sbjct: 355 LSTDSSYRFERGADIEITEFAARRALHLIQKFCGGKVAKGKLSFYPKPYTPKVIVFNPEK 414 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGV 469 ++ G+++P S IL LGF+V E + V VPSWR+ DV + DL+EEI+RIYG+ Sbjct: 415 STKILGVNIPPRKSFEILANLGFTVKKEQNYIVVKVPSWRKYDVAREIDLIEEIVRIYGM 474 Query: 470 DQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 I + PL T V N +L+ + VK L + ++ E +N+SFI ++ FG Sbjct: 475 KNVISTYPLMHTDV----NKNLEYDKLNEVKEFLTAFSLNEAINYSFIGEKLYRFFGLSV 530 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L +I NP+S + MR + P L++ N++R D +FE++ ++EN +G+K Sbjct: 531 ENLIKISNPLSEEWVYMRDKIFPSLVQNAVLNINRNEKDVFLFEIAKIFEN---KGEKLP 587 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSLDSLRFE 641 + GI +G++ ER VD +D K + L + F SLD++ Sbjct: 588 EEHLH---LGILLTGKIPEGILSERE--VDFYDLKGIVEGLLELLKLEGKFESLDNV--- 639 Query: 642 SGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + HPG+S +I EI G+ G+ HP++L+ + + E+ LD + K+ Sbjct: 640 ----EYLHPGQSAKVIVNEKEI--GFIGKLHPDVLERLDIKQDVFVGELSLDRLLEFSKE 693 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGE 760 R K + PV RD+A +VD +P G L +IK+ + ++ + +FD+++GK + E Sbjct: 694 REIFFK--QIPKFPPVTRDIAVLVDADMPVGKLEEVIKSSAKYLEKLKLFDLYKGKGIPE 751 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GKKSVA ++ + + T D+++ +++ I++ ++K A LR+ Sbjct: 752 GKKSVAFSLVFRSKEKTLSDEEVNKILNGIIK-ALEKFGATLRA 794 >gi|218709753|ref|YP_002417374.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio splendidus LGP32] gi|218322772|emb|CAV18949.1| Phenylalanyl-tRNA synthetase beta chain [Vibrio splendidus LGP32] Length = 795 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 267/819 (32%), Positives = 422/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV+ V+ FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVE--PVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P + + K+RG+ S G Sbjct: 59 ADKLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GDFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI + ++ + C + VK V +P Sbjct: 178 EV-----GVLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVNVKAESPI 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + +IAGI GG+ +G TTDVL+E A + P +I + G+ Sbjct: 293 NEAELNSNTLVIADQNKALAIAGIFGGQDSGVTTETTDVLLEAAFFAPDHIRGRARAYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + + + P+ + ++ Sbjct: 353 HTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRAK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G ++P D + IL RLG V + + PSWR D+ + DL+EE+ RIYG D Sbjct: 413 LDSLLGHEIPSTDVVEILTRLGCEVETTEAGWTATSPSWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ D + + R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQAPKAALKMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QK 585 L + PISADMS MR L+ GLL N R + +FE + + E G Q+ Sbjct: 530 PLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEATAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W + VD FD K D +V+E + + F++ Sbjct: 590 MMLAGVISGTRGEEH----WDIAT----NTVDFFDLKGDLEAVLELSANEIAYSFKAAKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I + V G G HP + FGL+ FE+ +I Sbjct: 642 PALHPGQTAAIVVDGKEV-GIIGTVHPELERKFGLNGRTIVFEIEWAAI-----NTRVLP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + V +S +RD+A +VD+ + +G +V+ I + +FDV+ G+ + EGKKS Sbjct: 696 EAVAVSKFPANRRDIAVVVDEAVASGDIVDACIAAGGEFLTGAKLFDVYVGQGVEEGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q ++ T D DI +D IV ++ +K A LR Sbjct: 756 LAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALR 794 >gi|331657694|ref|ZP_08358656.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA206] gi|315299754|gb|EFU58994.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 16-3] gi|331055942|gb|EGI27951.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli TA206] Length = 795 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/816 (32%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I ++ L I + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEIVPVGATIDDTLPIAVEAPDA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHLGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|260890858|ref|ZP_05902121.1| phenylalanyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] gi|260859411|gb|EEX73911.1| phenylalanyl-tRNA synthetase, beta subunit [Leptotrichia hofstadii F0254] Length = 798 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/820 (31%), Positives = 447/820 (54%), Gaps = 38/820 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L+WLK ++D D + + ++ + LT IG EVEK++ E L ++ E +PD Sbjct: 1 MLISLNWLKQYIDLDGIEINEMENALTMIGQEVEKIEVLGENLENVVTAHIVEKEMHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D GK + +QVVCGA N + G V A G+ + E+ ++ KIRG+ES GM Sbjct: 61 DHLTICKVDNGK-EILQVVCGASNHKAGDKVVLAQVGAKLAED-FVIKKGKIRGVESNGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE+EL + DS IM LP D P G + +YL ++D + ++ +TPNR DC+ GIA + Sbjct: 119 LCSEEELNIGKDSDGIMILPQDTPAGIPMKEYLGINDTVFELEITPNRPDCLSHIGIARE 178 Query: 178 LVAAGLGKLKEINISCPL----SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 L A GK E+ + SSE I ++ DS+L K + +K V +P W Sbjct: 179 L-GAYYGK--EVKYPSFMINTESSEKTADNISVEISDSNLAKRYVARIIKNVTVKESPKW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 +++R++++G+RSI+ +VD +N+V ++ P+H FD +I + VR EK++ LD Sbjct: 236 LKERVESIGIRSINNIVDASNFVMMELNQPNHAFDLDKIEGGKIVVRAGLENEKLVTLDE 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L+ D++VI+ + ++ G++GG+++ +NT ++L+EVA ++ N+ ++ + L + Sbjct: 296 QERELNSDDIVISDGVKAVALGGVMGGENSQITENTKNILLEVANFNSQNVRKTSRRLTL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +DS YRFER VD + + V+ + +LI + GG + +K +N E + Sbjct: 356 SSDSSYRFERRVDEENAVNVINRLANLIQEVAGGEILAGAVDNYPVPYEKKSAELNFERL 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G +P E + IL RL V+ + ++ PS+R D+E + D EEI+R+YG D Sbjct: 416 NRFVGKVIPRETVVGILTRLEIEVVDNGETLTLTAPSYRDDLENEQDYFEEIIRMYGFDN 475 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQR 529 I++ LP + ++ + + T+ VK + ++ + EV+N+SF+ K+ + + + Q Sbjct: 476 IEN-ILPKLDISEQPVIDTTKLSTQ-VKLIASNAGLKEVINYSFVPKDAMEKIKYTVAQE 533 Query: 530 EL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +L ++L PI+ D +R +LL L+K N++R +A+ FEVS +E ++ + Sbjct: 534 KLIDVLKPITEDFVTLRPTLLYSLIKNAKDNINRNVANIRFFEVSRTFEKAEELAKEEVK 593 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPS 646 GI E LW+ K D +D K V E F L ++ + S Sbjct: 594 LGIILAG---ENDKTLWNPKPVP----YDFYDLKG---IVEEIFTQLKFNNYMIKRSEQS 643 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF--GLSNPICGFEVYLDSIPISQKKRTKT 704 HPGRS + E++ G FGE HP++L+ F G ++ + G E +D I K+ Sbjct: 644 QLHPGRSVDVFVGRELI-GSFGEIHPDVLENFDLGKTSVLVG-EFNIDLIQKYIGKKVNY 701 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + +V + V RD AF++ + I G ++ I+ VD+ I+ V +FD++QG + G KS Sbjct: 702 QGIVKYPA---VPRDFAFVMKEEILVGDVLKTIQKVDKKIEKVELFDIYQGVGVLPGMKS 758 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VAI V+++ T + +I + ++IV + K AVLR Sbjct: 759 VAISVVLRDKSKTLEEKEIVDISNKIVAKIEKDYGAVLRQ 798 >gi|323948096|gb|EGB44087.1| phenylalanyl-tRNA synthetase [Escherichia coli H120] Length = 795 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + + TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHSLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|218705213|ref|YP_002412732.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli UMN026] gi|293405212|ref|ZP_06649204.1| pheT [Escherichia coli FVEC1412] gi|298380855|ref|ZP_06990454.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli FVEC1302] gi|300898499|ref|ZP_07116836.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] gi|218432310|emb|CAR13200.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli UMN026] gi|291427420|gb|EFF00447.1| pheT [Escherichia coli FVEC1412] gi|298278297|gb|EFI19811.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli FVEC1302] gi|300357851|gb|EFJ73721.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 198-1] Length = 795 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|261252653|ref|ZP_05945226.1| phenylalanyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] gi|260936044|gb|EEX92033.1| phenylalanyl-tRNA synthetase beta chain [Vibrio orientalis CIP 102891] Length = 801 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 268/825 (32%), Positives = 418/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAAIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +N P +++ +E+K ++ C + VK V P W Sbjct: 178 EVGVLNRADVTEPAVNAVAPAIDDTVSIEVKA----TAACPRYLGRVVKNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + P+ + +++ Sbjct: 354 TDSSMRFERGVDFALQTSAMERATELLVEICGGEVAPVVAVESEADLPKANTVSLRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 414 DSLLGHHIADSDVVEILERLGLTVETTDAGWTATAPTWRFDIAIEQDLIEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLIVPGVEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L + PISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 531 LILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ 640 M AG+ G+ S W ++ VD FD K D +V+E + + F Sbjct: 591 MLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANEAAYSFAALSAE 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 643 DKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 TK + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + Sbjct: 696 NTKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|308049412|ref|YP_003912978.1| phenylalanyl-tRNA synthetase beta subunit [Ferrimonas balearica DSM 9799] gi|307631602|gb|ADN75904.1| phenylalanyl-tRNA synthetase beta subunit [Ferrimonas balearica DSM 9799] Length = 795 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 264/821 (32%), Positives = 427/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S E++ + ++ GLEV+ VD A + +V+ ++PD D Sbjct: 1 MKFSESWLREWVNPAISTEELSEQISMAGLEVDGVDPVAADFHGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R+GL A G+ +P + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGEELLDIVCGASNCRLGLKVAVATVGAELP-GGFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP DAP+G + +YL L+D I+V LTPNR+DC+G+ G+A ++ Sbjct: 120 CSFTELGIDVEADGIIELPADAPIGTDIREYLALNDNAIEVDLTPNRADCLGLAGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKGVRNNV-AP 231 G L I ++ P E +E D +D C + VK + P Sbjct: 180 -----GVLNRIAVNEP---EVAAVEASIDAVHGIRVDAPEHCPRYLGRVVKNINVKAETP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+++L+ G+RSI A+VDITN++ L+ G P H FD ++++ + VR A +G+K+ LD Sbjct: 232 LWMQEKLRRGGIRSIDAVVDITNFLLLEYGQPMHAFDLAKLNGDIQVRLAAAGDKLTLLD 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E + D ++IA D ++AGI GG+H+G TTDVL+E A ++P++I ++ G Sbjct: 292 GNEVEPRADTLLIADDNGPLALAGIFGGEHSGVTTETTDVLLECAFFNPLSIIGKARSYG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNS 409 + TDS +RFERGVD Q V++ +L+LS+CGG A + ++ + +P I + Sbjct: 352 LHTDSSHRFERGVDPQLQAKVMERATALLLSICGGEAGPVVEVKSDAHLPQPATITLRRA 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ L G + ED IL RLG V ++ PSWR D+ + DL+EE+ RIYG Sbjct: 412 KLDALLGHVISDEDVSEILTRLGCEVTVVDGGWQAKAPSWRFDMAIEQDLIEEVARIYGY 471 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + I + P+ + D L R V+ +L R E + +SF+ +Q V G Sbjct: 472 NNIPNLAPVAELTMTDHTEAKLPLKR---VRSLLVDRGYQEAITYSFVDPKQQVRLHPGI 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 + + NPIS++MS MR SL GLL A N R +FE + D E Q Sbjct: 529 EPMVLPNPISSEMSAMRLSLWTGLLGAVAHNQARQQNRVRLFESGLRFIPDANEAMGVRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + A + G+ S W + + VD FD K D +V+ + F + Sbjct: 589 EPVLAAVIAGTQ----SDEHW----DMAAKTVDFFDLKGDLEAVLALTNTPYEFSFRAAQ 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+ I E+V G G HP GL+ FE+ +I Q K Sbjct: 641 HPALHPGQCAEILKGDEVV-GLIGAIHPQHEKKLGLNGRTIVFEIAQSAILERQLPEAKP 699 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +VD+ + G + +I+ V ++L+ V +FDV++GK + EG+ Sbjct: 700 -----VSRFPANRRDIAIVVDESVGGGDVEKVIRKVGGNQLV-AVNLFDVYRGKGVNEGQ 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q ++ T + +I ++ IV + + NA LR Sbjct: 754 KSLAIALTLQDVERTLEEKEIAQAVENIVATLKSEFNAQLR 794 >gi|332090638|gb|EGI95733.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella boydii 5216-82] Length = 795 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 262/819 (31%), Positives = 430/819 (52%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVVGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLYIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV---YLDSIPISQKKRTKTK 705 HPG+S I E + G+ G HP + L+ FE+ L + + Q + Sbjct: 645 HPGQSAAIYLKGECI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADLVVPQAR----- 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS Sbjct: 699 ---EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI +++Q T +++I + + VE + ++ A LR Sbjct: 756 LAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|296163122|ref|ZP_06845893.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] gi|295886624|gb|EFG66471.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. Ch1-1] Length = 811 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 279/841 (33%), Positives = 434/841 (51%), Gaps = 69/841 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVR--K 108 D + ++D G + +VCGAPNV V L+G PP E +R K Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIRLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + ++ LP D P+G + + L L D + ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLLILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + V G+A + A L+ + I P+ +E++P++I LC F+ ++GV Sbjct: 176 LSVFGVARETSAITGAPLRPLEIK-PVEVKLNETLPVKIS----APDLCGRFSGRVIRGV 230 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR G Sbjct: 231 NARAKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKG 290 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + L+ +L VIA + I+S+AGI+GG +T ++ +E A W P +I Sbjct: 291 ETLKLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTANIYLEAAFWWPDSIR 350 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + TD+ +RFERGVD + ++ I LIL +CGG A + + + R+ Sbjct: 351 GRSRKYNFSTDAGHRFERGVDYATTVEHIERITQLILDICGGEAGPVD-DQIVNVPKREP 409 Query: 405 VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 V M S R+ GI++ ++ +I RLG S D F V PS+R D+E + DL+EE+ Sbjct: 410 VKMRVSRANRIIGIEIGADEIAQIFTRLGLSFERGDDTFSVMPPSYRFDIEIEEDLIEEV 469 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E Sbjct: 470 ARIYGFEKIPARP-PVATSEMRATNETQRS-IHVIRHALAARDYAETVNFSFVDAEWEQD 527 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYEND--- 579 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 528 FAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLHDPSI 587 Query: 580 -----TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 T EG Q M G+ G + E G R VD FD K D S++ P Sbjct: 588 KAGELTVEGFAQPKMIGGLAYGPALDEQWG--------AATRTVDYFDVKGDLESILAPA 639 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 V+ RF HPGRS I+ + V G+ GE HP + + L + FE+ + Sbjct: 640 VA----RFVKAEHPALHPGRSARIELNGRAV-GWIGELHPRWMQKYDLPHAPILFEIEAE 694 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RLIDDV 747 + + Q+ +V S PV+RD+A +VDQ I L++ ++ + + V Sbjct: 695 A--LMQRVLPTPAEV---SKFPPVRRDIAVVVDQKIEVQALLDELQKAQSEPACKTVQKV 749 Query: 748 TVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +FD F+ KS L +KS+A +V +Q T +D+ + + + +VE + + A L Sbjct: 750 ALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVELAIQTLVERLARVYGARL 809 Query: 803 R 803 R Sbjct: 810 R 810 >gi|254506317|ref|ZP_05118460.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] gi|219550797|gb|EED27779.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus 16] Length = 801 Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust. Identities = 268/825 (32%), Positives = 419/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAAIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +N P +++ +E+K ++ C + VK V P W Sbjct: 178 EVGVLNRADVTEPAVNAVAPAIDDTVSIEVKA----TAACPRYLGRVVKNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + P+ + +++ Sbjct: 354 TDSSMRFERGVDFALQTSAMERATELLVEICGGEVAPVVAVESEADLPKANTVSLRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 414 DSLLGHHIADSDVVEILERLGLTVETTDAGWTATAPTWRFDIAIEQDLIEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVPGVEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L + PISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 531 LILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ 640 M AG+ G+ S W ++ VD FD K D +V+E + ++ F Sbjct: 591 MLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANENAYSFAALSAE 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 643 DKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 TK + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + Sbjct: 696 NTKVIPEAVALSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|134299477|ref|YP_001112973.1| phenylalanyl-tRNA synthetase subunit beta [Desulfotomaculum reducens MI-1] gi|134052177|gb|ABO50148.1| phenylalanyl-tRNA synthetase beta subunit [Desulfotomaculum reducens MI-1] Length = 806 Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust. Identities = 265/824 (32%), Positives = 440/824 (53%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ + WLKD++D ++ +++ D LT GL V+ VD + +++ +E++P+ D Sbjct: 1 MRVSYQWLKDYVDIQITPQELADRLTLSGLAVDTVDELGTEIENVVTGRIVKIEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+V GA NVR G + A G+ + E + + K+RG+ES GM+ Sbjct: 61 KLVVCQVDVGQEELLQIVTGATNVREGHVIPVALEGAKLAEG-LQIKRSKLRGVESRGML 119 Query: 119 CSEKEL-----MLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL +LS D A+ I+ LP D PVG + L L+D ++++ LTPNR D + + Sbjct: 120 CSGQELGMETRLLSPDMANGILILPEDVPVGLDAKEILGLNDAVLELDLTPNRGDALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A D VAA L E+ I P ++E I K D++D LC+ + +KG++ Sbjct: 180 GVARD-VAALLNT--ELKIPVPQFQENNEKIDKLAKIDIEDIDLCRRYVGRVIKGIKIGP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 +P W++ RL+A G+R IS +VD+TNYV L+ G P H FD +I++ + VRRA EKI+ Sbjct: 237 SPIWLQNRLRAAGIRPISNVVDVTNYVMLEMGQPLHAFDYDKIANHHIIVRRAQEDEKII 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 +LD E L+P+ + I + ++AG++GG + D T ++LVE A + PIN+ R+ K Sbjct: 297 SLDGVERTLNPEMLAITDEAGPVAVAGVMGGLESEVTDATINILVESAYFHPINVRRTSK 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR---NITYKPRKIV 405 LG+ ++S RFE+G+D+ G + + L+ L GG I + IT K I+ Sbjct: 357 ALGLRSESSMRFEKGIDINGCLRAADRALQLMQQLAGGMVVSGTIDKFPNPITEK--TIL 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 V + G+D+P ++ +RI+E L F V + V+VP++R D+ + DLVEE++R Sbjct: 415 LRPKRVNWVLGVDIPKQEIMRIMESLQFRVQEQEGDILVTVPTFRPDISGEWDLVEEVVR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG +QI E LP + QQ ++R++ S EVV + F+ L Sbjct: 475 LYGFNQI-PETLPFGATSQGVRTAEQQMNWD-MRRIMTSCGFYEVVTYGFVHPRIFDLMN 532 Query: 526 GGQREL-----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + + ++ NP+S + S MRT L+P LL+ +N +R AIFE++ V+ Sbjct: 533 LPKDSIFRNCVKLQNPLSEEQSIMRTVLVPSLLEVLQKNSNRRAQSGAIFEIARVFYPQ- 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 EGQ + + + W+ + R +D + K ++E + + Sbjct: 592 -EGQPLPEEVPVLAAVAYGNTQKTWNQPA----RPMDYYFMKGVVEQLMEGLGAASTAFS 646 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 PS +HPGR I+ + + LG GE HPN+++ + L P V LD +++ Sbjct: 647 RHQDPS-FHPGRCAKIEVAGRM-LGVVGELHPNVVENYEL--PSRAVAVKLDLKVLAEVN 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 R K+ L ++RDLA +V +PA +++II+ L+ + +FDV+QG + Sbjct: 703 RP-VKQYQGLPKFPTMERDLAVLVKLEVPAAEMLSIIQRAAGELLKETDIFDVYQGSQVP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KSVA + Q T D++I M RI +++ +T A LR Sbjct: 762 EGYKSVAFSMKFQAKDRTLTDEEINEKMQRITKSLFAQTGAELR 805 >gi|218548715|ref|YP_002382506.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia fergusonii ATCC 35469] gi|218356256|emb|CAQ88873.1| phenylalanine tRNA synthetase, beta subunit [Escherichia fergusonii ATCC 35469] Length = 795 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGSDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D S+++ L + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESILDLTGKLADVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|91787980|ref|YP_548932.1| phenylalanyl-tRNA synthetase subunit beta [Polaromonas sp. JS666] gi|91697205|gb|ABE44034.1| phenylalanyl-tRNA synthetase beta subunit [Polaromonas sp. JS666] Length = 808 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 257/836 (30%), Positives = 421/836 (50%), Gaps = 60/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ +++ +TLT GLEVE++ + PFT + ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLNTQQLAETLTMAGLEVEEL--KPVAPPFTKIVVGEIREAAQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D I ++D G+ + +VCGAPN RVG L+G PPG ++ V +R Sbjct: 59 ADRLRICQVDVGQGSLLTIVCGAPNARVGIKVPCALVGAELPPGE--DGKPFLIKVGTLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL DAP+G + ++L+L D + + LTPN + C+ Sbjct: 117 GVESQGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLQLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A ++ A LK +++ L +K D LC F+ V+ V A Sbjct: 177 VYGVAREVAALTGAPLKAPAFPAVPVADATQLPVKISAPD--LCGRFSGRVVRNVNTQAA 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P+WM RL G RS++ALVDI+NYV + G PSH+FD +I L VR +GE + Sbjct: 235 TPSWMVDRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKAGETLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA D +++S+AGI+GG D+T V VE A W P IA + Sbjct: 295 LNGNTVTVDEKVGVIADDVQVESLAGIMGGDATAVSDDTKHVYVEAAFWWPKAIAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KPRKIV 405 TD+ +RFERGVD + ++ I LI+ +C GT +C N +P + Sbjct: 355 YNFSTDAGHRFERGVDPGCTVEHIERISQLIIDIC-GTPETVCGPMNDAQVNLPQPTPVT 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + ++ G+ + L +L+RLG V V+ PS+R D++ + DL+EE++R Sbjct: 414 MRVARAAKVIGMPLTQAQCLDVLQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 + G +++ P PL + + + + R+ + V+R LAS E +N+SF+ + Sbjct: 474 MVGYNELPETP-PLAPITAR--IRPEAERSPFAVRRALASLGYQETINFSFVEERWEHEL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 G +++LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 531 AGNPNPIKLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVNVFELGRVFLRDAQSLN 590 Query: 583 --------GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 Q AG+ G G+ DK+ D FD K D +++ P + Sbjct: 591 TDTTVAGFHQPMRVAGLAYGPRAALHWGQ--PDKA------ADFFDVKGDVEALLAPLQA 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + F HPGR + + + G+ GE HP + ++ FE+ LD++ Sbjct: 643 V----FVPATHPAMHPGRCASVSVAGRHI-GFVGELHPQWRQGYEVAQAPLLFELELDTV 697 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVFDV 752 + Q +S L PV+RD+A IV + + L+ + D L+ T+FDV Sbjct: 698 LLRQ-----VPSFTPVSKLQPVERDIAVIVQESVTHAALMAAVHGADTRGLLKGATLFDV 752 Query: 753 F--QGKSLGE--GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + Q S G G+KS+A+++++ T DDDI + ++ N+ ++ A LR+ Sbjct: 753 YRPQQASAGMLLGEKSLAVRLVLSSDAATLTDDDIEAAVQAVLANLQQQLQARLRA 808 >gi|308186651|ref|YP_003930782.1| phenylalanyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] gi|308057161|gb|ADO09333.1| phenylalanyl-tRNA synthetase, beta subunit [Pantoea vagans C9-1] Length = 795 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 268/821 (32%), Positives = 425/821 (51%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ VD + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSAALSEQITMAGLEVDGVDAVAGVFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAPVG + YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHNGIIELPSDAPVGTDIRAYLQLDDNTIEISVTPNRADCLGLIGIARDV 179 Query: 179 -VAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 V GL K+ E+ +++ P+++ D C + VKG+ A P WM+ Sbjct: 180 AVLNGLPLKVPEMQPVAATLNDTFPIQV----DAPEACPRYLGRVVKGINVKAATPLWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITNYV L+ G P H FD RI + VR A GEK+ LD E Sbjct: 236 EKLRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGEKLTLLDGTEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + ++AGI GG+H+G + T ++L E A +DP++I + G+ TD Sbjct: 296 TLQSDTLVIADHQKALAMAGIFGGEHSGVNGETQNILFECAYFDPLSITGRARRHGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-----PRKIVFMNSE 410 + +R+ERGVD L+ L+LS+CGG A I + T++ P I + Sbjct: 356 ASHRYERGVDPALQHTALERATQLLLSICGGEAGPII---DQTHQAALPVPATITLRREK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG V +++ PSWR D+ + DLVEE+ RIYG + Sbjct: 413 LDRLIGHVIADEQITDILTRLGCDVTAGEGQWQAVAPSWRFDMAIEEDLVEEVARIYGYN 472 Query: 471 QIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 I P+ V + NLSL+++ K +L + E + +SF+ + L G Sbjct: 473 NIPDVPVQAGLVMTRHREANLSLKRA-----KNLLVDKGYQEAITYSFVDPKIQQLLHPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 + L + +PIS+DMS MR SL GLL A N +R + +FE + DT Sbjct: 528 EEALLLPSPISSDMSTMRLSLWTGLLNAVVYNQNRQQSRVRLFESGLRFVPDTQADLGIR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q M AG+ G+ E W + VD +D K D S+++ LD + F + Sbjct: 588 QDLMLAGVISGNRVEEH----WDLARQT----VDFYDLKGDLESLLDLTGKLDEISFRAE 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 A HPG+S I E + G+ G HP + L+ FE+ + ++ + Sbjct: 640 ANPALHPGQSAAIYLHDEHI-GFIGVVHPELERKLDLNGRTLVFELLWNK--VADRVLPD 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 +++ S +RD+A +V +++PA ++ K + V +FDV++GK + EG Sbjct: 697 AREI---SRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVSEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVGKCVAALKERFQATLR 794 >gi|323497531|ref|ZP_08102549.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] gi|323317614|gb|EGA70607.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio sinaloensis DSM 21326] Length = 801 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 268/825 (32%), Positives = 418/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAAIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +N P +++ +E+K ++ C + VK V P W Sbjct: 178 EVGVLNRSDVTEPAVNAVAPAIDDTVSIEVKA----TAACPRYLGRVVKNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + P+ + +++ Sbjct: 354 TDSSMRFERGVDFALQTSAMERATELLVEICGGEVAPVVAVESEADLPKANTVSLRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 414 DSLLGHHIADSDVVEILERLGLTVETTDAGWTATAPTWRFDIAIEQDLIEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVPGVEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L + PISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 531 LILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ 640 M AG+ G+ S W ++ VD FD K D +V+E + + F Sbjct: 591 MLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANEAAYSFAALSVE 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 643 DKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 TK + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + Sbjct: 696 NTKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|304415443|ref|ZP_07396092.1| phenylalanine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] gi|304282707|gb|EFL91221.1| phenylalanine tRNA synthetase beta subunit [Candidatus Regiella insecticola LSR1] Length = 808 Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust. Identities = 276/833 (33%), Positives = 435/833 (52%), Gaps = 56/833 (6%) Query: 1 MKFTLSWLKDHLDTD------VSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVE 53 MKF+ WL++ ++ D +S E++ D +T GLEVE ++ I V+ Sbjct: 1 MKFSELWLREWVNPDNTSGEPLSSEQLADQITMAGLEVESINKVAGDFHGVVIGHVVECA 60 Query: 54 RNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 ++P+ D + +ID G + +VCGAPN R GL A G+ +P I K+RG+ Sbjct: 61 QHPNADKLRVTKIDIGAAHFLDIVCGAPNCRQGLKVAVATVGAVLPMGYEI-KTAKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CS EL L ++ I+ELP+ AP+G L D+L+L+D II++++TPNR+DC+ + Sbjct: 120 LSAGMLCSSSELALCEEQEGIIELPVTAPIGMNLRDFLQLNDNIIEINVTPNRADCLSII 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NN 228 GIA DL A L E +I P+++ E +P+ + ++ C + VKG+ + Sbjct: 180 GIARDLAAIHQLPLTEPDI-IPVTATLKEKLPITVL----AAAACPRYLGRIVKGINLSA 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 V P WM +L+ G+RSI+ +VDITNYV L+ G P H FD RI +TVR A GE ++ Sbjct: 235 VIPQWMSNKLRHCGIRSINPVVDITNYVMLELGQPMHAFDLDRIDSEITVRFAVEGENLV 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L+ + +VIA ++ ++AGI GG ++G + T+ VL+E A ++P+ IA + Sbjct: 295 LLDGSEAILNTETLVIADRQKVLAMAGIFGGAYSGVSEQTSSVLLECAFFNPLAIAGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIV 405 + G+ T + +R+ERGVD L+ L++ +CGG A D+ + KP I Sbjct: 355 HYGLHTQASHRYERGVDPALQYKALERATRLLIDICGGEAGSIIDVTTGEELP-KPAIIT 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ L G +P E IL RLG V+ + + ++ PSWR D++ + DL+EEI R Sbjct: 414 LRYKKLCHLLGHVIPRERVNAILHRLGCQVMEQENSCQIVAPSWRFDMQIEEDLIEEIAR 473 Query: 466 IYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 I G + I ++P+ L ++ +LSL++ VK +L R E + +SF+ E Sbjct: 474 IDGYNNIPNKPINAALLMTAHNEGDLSLKR-----VKTLLVDRGYQEAITYSFVDPEIQT 528 Query: 523 LFGGGQ----RELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 L Q +E IL NPI+ +MS MR SLL GLL N +R +FE + Sbjct: 529 LLHPKQLHPKQEALILRNPIATNMSAMRLSLLTGLLTTVLYNQNRQQTRLRMFESGLRFI 588 Query: 578 NDTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 D Q M AG+ G S G W + R + VD FD K D S++E Sbjct: 589 PDNSAELNVRQDLMLAGVITGDS----CGEHW----DIRPQAVDFFDLKGDLESILELTG 640 Query: 634 SLDSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 L ++F ES HP +S I S E + G+ G HP + GL++ FE+ Sbjct: 641 RLSDVQFCAESTPHPALHPWQSATIYLSGESI-GFIGVIHPALEAKLGLNSRTIVFELQW 699 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + + +S +RD+A +V +++PA ++ K V I V +F Sbjct: 700 NKL-----ANCVIPDACEVSRFPANRRDIAVVVAENVPAADILAECKKVSVNQIVGVNLF 754 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK + EG KS+AI +++Q T +++I +++ V + +K A LR Sbjct: 755 DVYRGKGVAEGHKSLAISLILQDTVRTLAEEEIAATVEKCVVVLKEKFQASLR 807 >gi|82543884|ref|YP_407831.1| phenylalanyl-tRNA synthetase subunit beta [Shigella boydii Sb227] gi|187730770|ref|YP_001880503.1| phenylalanyl-tRNA synthetase subunit beta [Shigella boydii CDC 3083-94] gi|91208136|sp|Q321K5|SYFB_SHIBS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|81245295|gb|ABB66003.1| phenylalanine tRNA synthetase, beta-subunit [Shigella boydii Sb227] gi|187427762|gb|ACD07036.1| phenylalanyl-tRNA synthetase, beta-subunit [Shigella boydii CDC 3083-94] gi|320185863|gb|EFW60614.1| Phenylalanyl-tRNA synthetase beta chain [Shigella flexneri CDC 796-83] gi|332096350|gb|EGJ01351.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella boydii 3594-74] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ L Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDCLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|331677587|ref|ZP_08378262.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H591] gi|331074047|gb|EGI45367.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli H591] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 H G+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HSGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|317047873|ref|YP_004115521.1| phenylalanyl-tRNA synthetase subunit beta [Pantoea sp. At-9b] gi|316949490|gb|ADU68965.1| phenylalanyl-tRNA synthetase, beta subunit [Pantoea sp. At-9b] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 263/823 (31%), Positives = 429/823 (52%), Gaps = 49/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ VD A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSAALSEQITMAGLEVDGVDAVAGAFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGIARDV 179 Query: 179 VAAGLGKLKEINISCPLS-------SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA- 230 L + ++ P+ S++ P+ + D ++ C + VKGV A Sbjct: 180 AV-----LNGLPLTAPVIEPVKATISDTFPIRV----DATAACPRYLGRVVKGVNVKAAT 230 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WMR++L+ G+RSI +VDITNYV L+ G P H FD RI + VR A GE + L Sbjct: 231 PLWMREKLRRCGIRSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGESLTLL 290 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E LS D +VIA + ++ GI GG+H+G +D T ++L E A +DP+ I + Sbjct: 291 DGSEAKLSSDTLVIADHHKALAMGGIFGGEHSGVNDATQNILFECAYFDPLAITGRARRQ 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVFMNS 409 G+ TD+ +R+ERGVD ++ L+L +CGG A + + PR + + Sbjct: 351 GLHTDASHRYERGVDPALQYKAIERATQLLLDICGGAAGPVIDQTDAAALPPRATIRLRR 410 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 E + RL G + + IL RLG V ++ PSWR D+ + DLVEE+ RIYG Sbjct: 411 EKLDRLIGHVIADDQVTDILTRLGCEVTVSAGEWTAIAPSWRFDMAIEEDLVEEVARIYG 470 Query: 469 VDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + I P+ + V + +LSL++++T +L + E + +SF+ + L Sbjct: 471 YNNIPDVPVKASLVMTQHREADLSLKRAKT-----LLVDKGYQEAITYSFVDPKVQQLLH 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 G+ L + +PIS+DMS MR SL GLL A N +R + +FE + DT Sbjct: 526 PGEEALILPSPISSDMSAMRLSLWTGLLGAVVYNQNRQQSRVRLFESGLRFVPDTQADLG 585 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q M AG+ G+ E W + VD +D K D S+++ LD++ F Sbjct: 586 IRQDLMLAGVLSGNRNEEH----WDLARQT----VDFYDLKGDLESLLDLTGKLDAISFR 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + A HPG+S I E + G+ G HP + L+ FE+ + ++ + Sbjct: 638 AEANPALHPGQSAAIYLHDERI-GFIGVVHPELERKLDLNGRTLVFELLWNK--VADRVL 694 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGE 760 +++ S +RD+A +V +++PA ++ K + V +FDV++GK + E Sbjct: 695 PDAREI---SRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVNE 751 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 752 GEKSLAISLILQDTSRTLEEEEIAATVAKCVAALKERFQATLR 794 >gi|315126232|ref|YP_004068235.1| phenylalanyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] gi|315014746|gb|ADT68084.1| phenylalanyl-tRNA synthetase subunit beta [Pseudoalteromonas sp. SM9913] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 254/817 (31%), Positives = 431/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + L+ GLEV+ V+ A + + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPAIDTQALSEQLSMAGLEVDGVEPAAAKFNGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCRQGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL +S++ IMELP+DAP+G L +YL L D IIDV LTPNR DC+G++G+A ++ Sbjct: 120 CAFDELGISEEGDGIMELPLDAPIGADLREYLALDDNIIDVDLTPNRGDCLGIKGLAREV 179 Query: 179 VAAGLGKLKEINI---SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L I++ S P + +I ++ +L + C + +KG+ + P WM Sbjct: 180 -----GVLNSIDVNTLSIPAVTPTIEDKVSIELVNDDACPRYLGRVIKGINLDAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VD+TN+V L+ G+P H FD + I + VR A GE+++ LD Sbjct: 235 VEKLRRSGVRSIDPVVDVTNFVLLELGHPMHAFDLNAIEGGIKVRSATPGEELVLLDGNT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +VIA + +IAGI GG+ +G + T D+L+E A ++P+ IA ++ G+ T Sbjct: 295 AKLNESTLVIADHHKALAIAGIFGGEQSGVTEKTADILLESAFFNPVAIAGQARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 D+ +R+ERGVD ++ +L+L + GG A I +A + K ++ S + Sbjct: 355 DASHRYERGVDFALQHDAMERATALLLEIVGGNAGPIVEAVAADKLPKVTEVRLRRSRLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G + IL RLG V + D + VPS+R D+ + DL+EE+ R+YG + I Sbjct: 415 RVIGHHIDDAKVTDILTRLGLDVKFDNDSWSADVPSYRFDIRIEEDLIEEVARVYGYNSI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P ++ ++ SR R L +R E + +SF+ + + L Sbjct: 475 PNVAPTAKLKMTTHDESTVALSRFR---NALVTRGYQEAITYSFVDPKAQAILHPECNAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAG 590 + +PIS +MS MR SL+PGLL + N +R +FE + +D + E Y Sbjct: 532 VLPHPISIEMSAMRVSLMPGLLASVAYNQNRQQPRIRLFEHGLKFISDESAENGVYQVPV 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WY 648 I +G+ G W E R VD +D K D +++ ++ D RFE A Sbjct: 592 IGGVITGLV-HGEHWV----EEKRNVDFYDLKGDVEALLA--ITNDVSRFEIKAEQSDGL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S +I + V G+FG HP ++N FE+ + ++ ++ V Sbjct: 645 HPGQSAVIYVDGKKV-GFFGALHPQAQKSLDINNATFVFEIEMSAL-----EKRNLPLAV 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S +RD+A +V + G ++N+I V ++L+ D+ +FDV++GK + KS+A Sbjct: 699 GVSKFPSNRRDIAILVQDSVKIGDILNVIGKVGGNQLV-DLNLFDVYKGKGIEPNYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I + +Q + T + DI ++D +V + ++ NA LR Sbjct: 758 IALTLQAVDRTLEEKDINQVVDNVVAALAEQFNASLR 794 >gi|289661756|ref|ZP_06483337.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 792 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 248/786 (31%), Positives = 416/786 (52%), Gaps = 40/786 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQAARDELAATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARPGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E LD + ++G+ + P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVE----LDAGKQAPRYCGRVIEGIDPSAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPIGVRRSRAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDGFLTITDAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPQHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG + + +EV PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDADVVRMLRALGMQLDAVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P +++ L + V+R L +R + E +N++F+ + + Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAGLLERWQVTDGLVP 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----QKYM 587 + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ G +++ Sbjct: 532 LANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAAEPGAAPLESQHV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D +++ S L F++ A + Sbjct: 592 AAAVCGDALALQ-----WG----EAARKVDFHDLKGDLMALAA--ASGAQLEFQASAQPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + G+ G+ HP + + + FE+ L P+ Q+ + + Sbjct: 641 GHPGRSADIYRDGACI-GWIGQVHPRLAKALDIDVDVVAFELQL--APLVQRALPRAGE- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF+V + + A ++ V L+ +V +FD + G+ + G KS+A Sbjct: 697 --LSRFPSVRRDLAFLVPEEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVESGFKSLA 754 Query: 767 IQVLIQ 772 + +++Q Sbjct: 755 MGLILQ 760 >gi|90410620|ref|ZP_01218636.1| phenylalanyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] gi|90328861|gb|EAS45145.1| phenylalanyl-tRNA synthetase beta subunit [Photobacterium profundum 3TCK] Length = 801 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 272/825 (32%), Positives = 426/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDEV--APVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P N + K+RG+ S G Sbjct: 59 ADKLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GNFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGTALGMDVRELLELNDVAIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E I+ P +++ +EIK + C + VK V +P W Sbjct: 178 EVGVLNRADVTEPVIDAVAPSIDDTVSVEIKA----TDACPRYLGRVVKNVNVKAESPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN+V L++G P H FD S+I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNFVMLEQGQPMHAFDLSKIDGGIVVRLAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ +VIA + +IAGI GGK +G TTDVL+E A + P +I + G+ Sbjct: 294 EAELNSKTLVIADHTKALAIAGIFGGKDSGVTTETTDVLLEAAFFAPDHIRGRARAYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + + P+ + +++ Sbjct: 354 TDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLG--FSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILR 465 L G ++P ED + IL RLG SV+ + + + + P+WR D+ + DL+EE+ R Sbjct: 414 DSLLGHEIPSEDVVEILTRLGCNVSVVEDSETTDAGWTATSPAWRFDIAIEQDLIEEVGR 473 Query: 466 IYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D I ++ P+ ++ D + + R V+ +L R E + +SF+ EQ L Sbjct: 474 IYGYDNIPNQAPVAALKMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLV 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPE 582 G L + PISADMS MR L+ GLL N R + +FE + + E Sbjct: 531 VPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEASAEN 590 Query: 583 G--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 G Q+ M AG+ G+ G E W + VD FD K D +++E + + F Sbjct: 591 GMRQEMMLAGVIAGTRGEEH----WDIDT----NTVDFFDLKGDLEAILELTANEKAYSF 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ++ HPG++ I + V G G HP + FGL+ FE+ +I Sbjct: 643 KAAKHPALHPGQTAAIVVDGKEV-GIIGTVHPELERKFGLNGRTVVFEIEWAAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 T+ + V +S +RD+A +VD +G +V I + D +FDV+ GK + Sbjct: 696 NTRVLPEAVAVSKFPANRRDIAVVVDDAAASGDIVKACIAAGGEFLTDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV + ++ A LR Sbjct: 756 EEGKKSLAIALSLQSVERTLEDADISGAVDSIVAVLAERFGASLR 800 >gi|238027726|ref|YP_002911957.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia glumae BGR1] gi|237876920|gb|ACR29253.1| Phenylalanyl-tRNA synthetase, beta subunit [Burkholderia glumae BGR1] Length = 809 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 272/830 (32%), Positives = 424/830 (51%), Gaps = 56/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTSRIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G + +VCGAPNV V L+G PP E I + K+R Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGEPFRI-RLSKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LSDD + +M LP D P+G + + L L D I ++ LTPN++DC+ Sbjct: 118 GVESQGMLCSARELKLSDDHSGLMILPEDTPIGRDIREVLNLDDTIFEIKLTPNKADCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 V GIA + A LK + + P+++E ++P+ I LC F+ ++GV Sbjct: 178 VYGIARETAAITGAPLKAVAFA-PVATELDETLPVRIS----APDLCGRFSGRVIRGVNA 232 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE Sbjct: 233 RAKTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGAIDVRWGRRGET 292 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ +L VIA +G+++S+AGI+GG +TT++ +E A W P +I Sbjct: 293 LKLLNGNTVELDETVGVIADEGQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGR 352 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + TD+ +RFERGVD + L+ I LIL +CGG A + + + R V Sbjct: 353 SRKYNFSTDAGHRFERGVDYSTTVEHLERITQLILEICGGQAGPVD-DQAVNLPTRAPVA 411 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 M + R+ G+ + ++ I RLG S + D F V+ P R D+E + DL+EE+ R Sbjct: 412 MRVARANRIIGVAIGADEIAAIFTRLGLSFERDGDTFLVTPPPHRFDIEIEEDLIEEVAR 471 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 I+G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ + F Sbjct: 472 IHGFEKIPARP-PVATSEMRATNETQRS-IHTIRHALAARDYAETVNFSFVDADWERDFA 529 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEG 583 G R + +LNPI++ +S MRT+L L+ N++R FE V+ D G Sbjct: 530 GNTRPVRLLNPIASQLSVMRTTLFGSLVNVLRHNLNRRADRVRAFETGRVFLADPTVAAG 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + + G G L ++ R VD FD K D +++ P V+ RF Sbjct: 590 ELTVEGYAQPKRVGALAYGPLLEEQWGAPTRQVDFFDVKGDLEALLAPAVA----RFVKA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ Sbjct: 646 EHPALHPGRSARIELDGRAV-GWIGELHPRLMQQYELPHAPVMFEIDADAL-IARALPVP 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS- 757 T +S PV+RD+A +VDQ + A TL + ++ + + + +FD F+ KS Sbjct: 704 TD----VSKFPPVRRDIAVVVDQGVEAQTLFDAMQGALADEACKFVQKIVLFDEFRAKSN 759 Query: 758 ----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V++Q DD L D +VE ++ LR Sbjct: 760 TSGGLAMHEKSLAFRVVLQ--------DDAGTLQDEVVERAIRALVDSLR 801 >gi|320173203|gb|EFW48414.1| Phenylalanyl-tRNA synthetase beta chain [Shigella dysenteriae CDC 74-1112] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ L Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDCLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKALLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|301026994|ref|ZP_07190381.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] gi|300395234|gb|EFJ78772.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 69-1] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/816 (31%), Positives = 429/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDISNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|325497125|gb|EGC94984.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia fergusonii ECD227] Length = 795 Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 TVLNQLPLVEPEI-VPVGA-TIDDTLPIAVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G ++ T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNEETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLADVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|291282893|ref|YP_003499711.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli O55:H7 str. CB9615] gi|209768894|gb|ACI82759.1| phenylalanine tRNA synthetase beta-subunit [Escherichia coli] gi|290762766|gb|ADD56727.1| Phenylalanyl-tRNA synthetase beta chain [Escherichia coli O55:H7 str. CB9615] gi|320658379|gb|EFX26073.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli O55:H7 str. USDA 5905] Length = 795 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 427/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + + L+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIRESLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|76875752|emb|CAI86973.1| phenylalanine tRNA synthetase, beta-subunit [Pseudoalteromonas haloplanktis TAC125] Length = 769 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 248/788 (31%), Positives = 419/788 (53%), Gaps = 35/788 (4%) Query: 29 GLEVEKVDNREA-LSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 GLEV+ V A + + +V+ ++PD D + +I+ G + + +VCGAPN R+G+ Sbjct: 3 GLEVDGVTPAAAKFNGVLVGEVVECGQHPDADKLRVTKINVGGDELLDIVCGAPNCRLGI 62 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 A G+ +P + + K+RG S GM+C+ EL +S++ IMELP DAPVG L Sbjct: 63 KVAVATVGAVLP-GDFKIKKAKLRGQPSNGMLCAFVELGISEEGDGIMELPSDAPVGTDL 121 Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISC---PLSSESIPLE 203 +YL L D IIDV LTPNR DC+G++G+A ++ G L I+++ P + ++ + Sbjct: 122 REYLGLDDNIIDVDLTPNRGDCLGIKGLAREV-----GVLNSIDVNVLQIPAVTATVDDK 176 Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 + +L + C + +KG+ + A P WM ++L+ G+RSI +VD+TNYV L+ G+ Sbjct: 177 VSIELVNEDACPRYLGRVIKGINLDTATPLWMVEKLRRSGVRSIDPVVDVTNYVLLELGH 236 Query: 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA 322 P H FD + I + VR A +GE+++ LD L+ +VIA + +IAGI GG+ + Sbjct: 237 PMHAFDLNAIEGGIKVRSANAGEELVLLDGNSVKLNESTLVIADHNKALAIAGIFGGEQS 296 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 G + T+D+L+E A ++P+ IA ++ G+ TD+ +R+ERGVD ++ +L+L Sbjct: 297 GVTNKTSDILLESAFFNPVAIAGQARSYGLHTDASHRYERGVDFALQHDAIERATALLLE 356 Query: 383 LCGGTASDI--CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 + GG A + +A + K ++ S + R+ G + E IL RLGF+V E D Sbjct: 357 IVGGEAGPVVEAVAADKLPKVTEVRLRRSRLDRVIGHHIEDEKVTDILTRLGFNVKVEND 416 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVK 499 + VPS+R DV + DL+EE+ R+YG + I + P ++ ++ S+ R Sbjct: 417 SWSADVPSYRFDVRIEEDLIEEVARVYGYNSIPNVAPTAKLKMTTHNEATIALSKFR--- 473 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 L +R E + +SF+ + + + L + +PIS +MS MR SL+PGLL + N Sbjct: 474 NTLVARGYQEAITYSFVDPKAQAILHPESQPLVLPHPISIEMSAMRVSLMPGLLASLAYN 533 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 +R +FE + +D + G G W E R VD + Sbjct: 534 QNRQQPRIRLFEHGLKFLSDENAENGVNQVPVIGGVITGLAHGEHWV----EEKRNVDFY 589 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPS--WYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 D K D +++ ++ D RFE A HPG+S +I + + V G+FG HP Sbjct: 590 DVKGDVEALLA--ITNDMSRFEIKAEQSDGLHPGQSAVIYVAGKKV-GFFGALHPQAQKS 646 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 ++N FE+ + +I ++ +V +S +RD+A +V + + G ++ I Sbjct: 647 LDINNATFVFEIEMSAI-----EKRNLPQVAGVSKFPSNRRDIAILVQESVNIGDILTAI 701 Query: 738 KNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + V ++L+ D+ +FDV++GK + KS+AI + +Q + T + DI +++D +V + Sbjct: 702 EKVGGNQLV-DLNLFDVYKGKGIEPNYKSLAIALTLQSVDRTLEEKDINLVVDNVVATLA 760 Query: 796 KKTNAVLR 803 ++ NA LR Sbjct: 761 EQFNASLR 768 >gi|289668708|ref|ZP_06489783.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 792 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 248/786 (31%), Positives = 416/786 (52%), Gaps = 40/786 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQAARDELAATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARPGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + P+S+ ++ +E LD + ++G+ + P W+ Sbjct: 179 AAACASEVVAFDAGAVAPVSTRTLAVE----LDAGKQAPRYCGRVIEGIDPSAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPIGVRRSRAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDGFLTITDAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I+ + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPQHLPQPARILLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG + + +EV PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDADVVRMLRALGMQLDAVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P +++ L + V+R L +R + E +N++F+ + + Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAGLLERWQVTDGLVP 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----QKYM 587 + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ G +++ Sbjct: 532 LANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAAEPGAAPLESQHV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D +++ S L F++ A + Sbjct: 592 AAAVCGDALALQ-----WG----EAARKVDFHDLKGDLMALAA--ASGAQLEFQASAQPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + G+ G+ HP + + + FE+ L P+ Q+ + + Sbjct: 641 GHPGRSADIYRDGACI-GWIGQVHPRLAKSLDIDVDVVAFELQL--APLVQRALPRAGE- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF+V + + A ++ V L+ +V +FD + G+ + G KS+A Sbjct: 697 --LSRFPSVRRDLAFLVPEEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKSLA 754 Query: 767 IQVLIQ 772 + +++Q Sbjct: 755 MGLILQ 760 >gi|193065241|ref|ZP_03046313.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli E22] gi|194428509|ref|ZP_03061048.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli B171] gi|260844065|ref|YP_003221843.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|192927035|gb|EDV81657.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli E22] gi|194413387|gb|EDX29670.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia coli B171] gi|195182903|dbj|BAG66473.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O111:H-] gi|257759212|dbj|BAI30709.1| phenylalanine tRNA synthetase, beta subunit [Escherichia coli O103:H2 str. 12009] gi|323158489|gb|EFZ44505.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli E128010] Length = 795 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + + TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHSLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGKRI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|261344011|ref|ZP_05971656.1| phenylalanyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] gi|282568402|gb|EFB73937.1| phenylalanyl-tRNA synthetase, beta subunit [Providencia rustigianii DSM 4541] Length = 795 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 273/815 (33%), Positives = 432/815 (53%), Gaps = 33/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ VS E++ D +T GLEV+ VD + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVSSEELSDQITMAGLEVDGVDAVAGQFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATVGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP+DA +G + +YL+L D I++S+TPNR+DC+ + G+A D+ Sbjct: 120 CSYSELGISDDHSGIIELPLDAQIGTDIREYLKLDDNAIEISITPNRADCLSILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I+ P++S +I ++ + C F +K + P WM+++ Sbjct: 180 AVVNKLDLTEPTIT-PVAS-TIKDIFPIRVEAPAACPRFLGRVIKNIDVTAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VDITN+V L+ G P H +D R+ + VR A EK++ LD E L Sbjct: 238 LRRGGVRSIDAVVDITNFVLLELGQPQHAYDLDRLDGSIIVRMAKDEEKLVLLDGTEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + + IAGI GG+H+G + T +VL+E A ++P+ I +N G+ TD+ Sbjct: 298 KSDTLVIADESKALGIAGIFGGEHSGVNSETKNVLLECAFFEPLAITGRARNYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLS 415 +RFERGVD Q ++ +LI+ +CGG DI + + P+ I ++ RL Sbjct: 358 HRFERGVDPQLQFKAIERATALIVEICGGEVGDIIDVTSEEHLPKAATIKLTRKKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + + IL+RLG V ++V PSWR D++ + DLVEE+ R+YG + I Sbjct: 418 GHVIADDIVTDILKRLGCQVQVSVGCWDVVAPSWRFDMQIEEDLVEEVARVYGYNNIPDV 477 Query: 476 PLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PL V D + +L R +K +L R E + +SF+ + L Q L + Sbjct: 478 PLRADLVMTDHKEANLPLKR---IKAMLVDRGFQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG--QKYMAAG 590 NPISADMS MR SLL GLL N +R +FE + +N G Q+ M AG Sbjct: 535 NPISADMSAMRLSLLTGLLGTVVYNQNRQQNRIRLFETGLRFTPDNQAEYGIRQENMLAG 594 Query: 591 IRKGSSGIEGSGRLWS-DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + G+ E WS DK + VD FD K D +V E L+ + F+S A H Sbjct: 595 VITGNKFDEH----WSIDK-----QVVDFFDLKGDLEAVFELTGKLNQITFKSEAHPALH 645 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG+S I E + G+ G HP + L+ FEV D+ I++++ + K + Sbjct: 646 PGQSAGIYLENEHI-GFIGVVHPELERKLDLNGRTVVFEVRTDA--ITEREIPEAKAISR 702 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +RD+A +V +++ A ++ K V I + +FDV+ G+ + EG KS+AI Sbjct: 703 YPS---NRRDIAVVVPENVAAAEVLAECKKVGINHIVGINLFDVYCGEGIAEGYKSLAIS 759 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q + T +++I +D V + ++ A LR Sbjct: 760 LVFQDTQRTMEEEEITATVDLCVAALKQRFQASLR 794 >gi|167587358|ref|ZP_02379746.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia ubonensis Bu] Length = 809 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 267/821 (32%), Positives = 417/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP DAPVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDAPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVDIR-PVHVELDETLPVRIA----APDLCGRFSGRVIRGVNARA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +T ++ +E A W P +I + Sbjct: 295 LLNGNSVELDETVGVIADDAQVESLAGIMGGDSTAVTLDTANIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILDICGGKAGPVD-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG S + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIANIFTRLGLSFERDEDVFSVAPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHAIRHALAARDYAETVNFSFVDAEWERDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D+ G+ Sbjct: 532 DNPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFETGRVFLADSSVTSGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +A + G G ++ R VD FD K D +E ++ S RF Sbjct: 592 AVAGYAQPKRVGALAYGPALDEQWGAPTRAVDFFDVKGD----LEALLAPTSARFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVLFEIDADAL-IARALPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALADDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMAR 802 >gi|91784423|ref|YP_559629.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia xenovorans LB400] gi|91688377|gb|ABE31577.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia xenovorans LB400] Length = 811 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 276/845 (32%), Positives = 429/845 (50%), Gaps = 77/845 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVR--K 108 D + ++D G + +VCGAPNV V L+G PP E +R K Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIRLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D + ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCV 222 + V G+A + A L+ + I P+E+K + + LC F+ + Sbjct: 176 LSVFGVARETSAITGAPLRPLEIK--------PVEVKLNETLPVRISAPDLCGRFSGRVI 227 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 +GV +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR Sbjct: 228 RGVNARAKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWG 287 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + L+ +L VIA + I+S+AGI+GG +T ++ +E A W P Sbjct: 288 RKGETLKLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTANIYLEAAFWWPD 347 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +I + TD+ +RFERGVD + ++ I LIL +CGG A + I P Sbjct: 348 SIRGRSRKYNFSTDAGHRFERGVDYATTVEHIERITQLILDICGGEAGP--VDDQIVNVP 405 Query: 402 RK--IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 ++ + S R+ GI++ ++ +I RLG S D F V PS+R D+E + DL Sbjct: 406 KREPVTMRVSRANRIIGIEIGADEIAQIFTRLGLSFERGDDTFSVMPPSYRFDIEIEEDL 465 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ RIYG ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E Sbjct: 466 IEEVARIYGFEKIPARP-PVATSEMRATNETQRS-IHVIRHALAARDYAETVNFSFVDAE 523 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYEN 578 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ + Sbjct: 524 WEQDFAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLH 583 Query: 579 D--------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 D T EG Q M G+ G + E G R VD FD K D +V Sbjct: 584 DPSIKAGELTVEGFAQPKMIGGLAYGPALDEQWG--------AATRTVDYFDVKGDLEAV 635 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + P V+ RF HPGRS I+ + V G+ GE HP + + L + FE Sbjct: 636 LAPAVA----RFVKAEHPALHPGRSARIELNGRAV-GWIGELHPRWMQKYDLPHAPILFE 690 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RL 743 + +++ ++ T +S PV+RD+A +VDQ I L++ ++ + Sbjct: 691 IEAEAL---MQRVLPTP--AEVSKFPPVRRDIAVVVDQKIEVQALLDELQKAQSEPACKA 745 Query: 744 IDDVTVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + V +FD F+ KS L +KS+A +V +Q T +D+ + + + +V + + Sbjct: 746 VQKVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVELAIQTLVARLARVY 805 Query: 799 NAVLR 803 A LR Sbjct: 806 GARLR 810 >gi|315634293|ref|ZP_07889580.1| phenylalanyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] gi|315476883|gb|EFU67628.1| phenylalanyl-tRNA synthetase beta subunit [Aggregatibacter segnis ATCC 33393] Length = 796 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 256/820 (31%), Positives = 431/820 (52%), Gaps = 42/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ +S E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAISTEQLCEQITMLGLEVDGVEKVAGDFTGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAELP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP DAP+G L DYL L D I++SLTPNR+DC+ + G+A +L Sbjct: 120 CSFSELGIESDANGIIELPQDAPIGTNLRDYLTLDDSAIEISLTPNRADCLSIAGVAREL 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + KL E + +I +++ D+ + C + + +K V +P W++++ Sbjct: 180 --AVVNKLHENPPHFEVVKPTISDKVQIDVQAAEACPRYLLRVIKNVNVKAQSPMWLQEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ +RSI +VD+TNY+ L+ G P H FD ++++ + VR A E+++ LD L Sbjct: 238 LRRCDIRSIDPIVDVTNYILLELGQPMHAFDMAKVAQPVQVRMAKENEELVLLDGTTAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKNLGIITDS 356 P+ +VIA ++AGI GG+ +G + +NT DV++E A + P+ I + G+ TDS Sbjct: 298 QPNTLVIADQNGALAMAGIFGGEASGVNVENTKDVILEAAFFAPLAITGRARQYGLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRL 414 +RFERGVD + ++ +L+L +CGG A +IC + + P++ + ++ L Sbjct: 358 SHRFERGVDFELPRKAMERATALLLEICGGEAGEICEVTHEAHLPKRQQVTLQRHKLDAL 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-K 473 G + E IL+RLG V + + PSWR D+E + DL+EE+ RIYG + I Sbjct: 418 LGHHIETETVTDILQRLGLQVSYANNSWTAVAPSWRFDIEIEEDLIEEVARIYGYNSIPN 477 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + PL ++ + ++ SR +K L S E + +SF+ + L + + Sbjct: 478 NAPLAHLRMREHSEADIELSR---IKAALVSCDFYEAITYSFVDPKIQSLLHPEIKPFIL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAA 589 NPIS +MS MR SLL GLL A N +R +FE + D Q+ + A Sbjct: 535 PNPISVEMSAMRVSLLTGLLGAVSYNQNRQQNRVRLFEFGLRFVPDEKAEFGVRQEQVFA 594 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS----LRFESGAP 645 + GS E WS+K+ D +D K IE +SL S +F + + Sbjct: 595 AVMTGSKANEQ----WSEKAAP----ADFYDLKG----YIENLLSLSSAGNRAKFVAKSY 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + HPG+S I E + G+ G+ HP I G++ + ++ I I+ R Sbjct: 643 TALHPGQSAAIMLDGEEI-GFIGQLHPTIAQKIGING-----KAFVCEISIAHISRRDIA 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI--IKNVDRLIDDVTVFDVFQGKSLGEGKK 763 K +S +RDLA +V + A +++ + D+L V +FDV+QG + EG K Sbjct: 697 KAKEISRFPANRRDLALVVADSVAADDVLDACRVAGGDKLT-QVNLFDVYQGSGVAEGHK 755 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI ++IQ + T +D+I ++ ++ + ++ NA LR Sbjct: 756 SLAISLVIQDNEKTLEEDEINAVISAVLSELKQRFNAYLR 795 >gi|260779020|ref|ZP_05887912.1| phenylalanyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] gi|260605184|gb|EEX31479.1| phenylalanyl-tRNA synthetase beta chain [Vibrio coralliilyticus ATCC BAA-450] Length = 801 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 267/825 (32%), Positives = 417/825 (50%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ VS +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGIMELAEDAAIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E +N P +++ +E+K + C + VK V P W Sbjct: 178 EVGVLNRADVTEPAVNPVAPAIDDTVSIEVKA----PAACPRYLGRVVKNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITN++ L++G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDPVVDITNFILLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 294 EAELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + P+ + +++ Sbjct: 354 TDSSMRFERGVDFALQTSAMERATELLVEICGGEVAPVVAEESEADLPKANTVSLRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 414 DSLLGHHIADSDVVEILERLGLTVSTTDTGWTATAPTWRFDIAIEQDLIEEVGRIYGYDN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G Sbjct: 474 IPNQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVPGVEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L + PISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 531 LILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ 640 M AG+ G+ S W ++ VD FD K D +V+E + ++ F Sbjct: 591 MLAGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANENAYSFAALSAE 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPG+S I + V G G HP + FGL+ FEV +I Sbjct: 643 DKAANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------ 695 Query: 701 RTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSL 758 TK + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + Sbjct: 696 NTKVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGEFLKDAKLFDVYVGKGV 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T D DI +D IV +V K A LR Sbjct: 756 EEGKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSDKFGASLR 800 >gi|209919073|ref|YP_002293157.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli SE11] gi|209912332|dbj|BAG77406.1| phenylalanyl-tRNA synthase beta subunit [Escherichia coli SE11] gi|324016466|gb|EGB85685.1| phenylalanyl-tRNA synthetase, beta subunit [Escherichia coli MS 117-3] Length = 795 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVEAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G + T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNGETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|146311385|ref|YP_001176459.1| phenylalanyl-tRNA synthetase subunit beta [Enterobacter sp. 638] gi|145318261|gb|ABP60408.1| phenylalanyl-tRNA synthetase beta subunit [Enterobacter sp. 638] Length = 795 Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 432/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++T + E + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNTTLDSEALSNQITMAGLEVDGVEPVSGAFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DAP+G + ++L+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPVDAPIGTDIREFLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L I+ ++ + L I+ + D+ C + VKG+ P WM+++ Sbjct: 180 AVLNQTDLNAPEIAPVAATITDTLPIQVEAADA--CPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TN+V L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNFVLLELGQPMHAFDKDRIDGGIVVRMAKEGETLVLLDGSEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLLDICGGEAGPVIDVTNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHISDAQVSDILHRLGCEVTEGQDQWQAIAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + L G L Sbjct: 478 PVQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFVDPKLQQLVHPGHEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPIS++MS MR SLL GLL N +R + IFE + P+ Q + GIR Sbjct: 533 LPNPISSEMSAMRLSLLTGLLGTIVYNQNRQQSRVRIFETGLRF---VPDTQANL--GIR 587 Query: 593 KGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + +G + ++ EE VD +D K D SV++ L + F + A Sbjct: 588 Q---DLMLAGAICGNRYEEHWDLTKNSVDFYDVKGDLESVLDLTGKLSEIEFRAEACQGL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRTK 703 HPG+S I E + G+ G HP + L+ FE+ + IP +Q Sbjct: 645 HPGQSAAIYLHDERI-GFIGVVHPELERKLDLNGRTMVFELEWNKVADRVIPQAQD---- 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PA L K + V +FDV++GK + EG Sbjct: 700 ------VSRFPANRRDIAVVVAENVPAADILAECKKVGVNQVVGVNLFDVYRGKGVAEGF 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 754 KSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|328676978|gb|AEB27848.1| Phenylalanyl-tRNA synthetase beta chain [Francisella cf. novicida Fx1] Length = 790 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 267/812 (32%), Positives = 422/812 (51%), Gaps = 40/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L+ + + + TLT GLEV+ +++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLNDTQTSQDLAGTLTLAGLEVDAIESVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L+D + +M+LP++APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLADKADGLMDLPVNAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKDLEILEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD +++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLAGGINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDSDTLVIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI +++ + Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQVKINLSINKLNHV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG ++ Sbjct: 418 LGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + L R E +N+SFI + F R + Sbjct: 478 -PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGI 591 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG+ Sbjct: 535 IQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHP 650 G E WS+ + VD FD KAD ++ L L FE +W HP Sbjct: 595 AYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTRLSFEVCNDINWLHP 642 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKVV 708 G+S I + + G G HP +L F + PI FE+ LD + + + Sbjct: 643 GQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLDVLT-----KRQIPNFT 695 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S V RD++F+VD+ + AG ++ I+ ++ ++ DV++FD+++ + +KS+A+ Sbjct: 696 KISKYPSVSRDISFLVDKSVLAGDIIKAIRALNINILKDVSIFDIYESQD--SDRKSIAL 753 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L Q T D I MD+++E + K N Sbjct: 754 NMLFQDNLQTLDDKVIVESMDKVLEALKTKFN 785 >gi|295677043|ref|YP_003605567.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] gi|295436886|gb|ADG16056.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. CCGE1002] Length = 811 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 270/838 (32%), Positives = 433/838 (51%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPRLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENN--MIVNVRK 108 D + +++ G + +VCGAPNV V L+G PP E ++ + K Sbjct: 59 ADKLNVCQVNAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFVIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D + ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + V G+A + A L+ ++I S P+ +E++P++I LC F+ ++GV Sbjct: 176 LSVFGVARETSAITGAPLRPLDIKSAPVKLNETLPVKIS----APDLCGRFSGRVIRGVN 231 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR GE Sbjct: 232 ARAKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKGE 291 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + L+ +L VIA + I+S+AGI+GG +TT++ +E A W P +I Sbjct: 292 TLKLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRG 351 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-- 403 + TD+ +RFERGVD + ++ I LIL +CGG A + I P++ Sbjct: 352 RSRKYNFSTDAGHRFERGVDYATTVDHIERITQLILDICGGEAGP--VDDQIVNVPKRAP 409 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + S R+ G+ + ++ +I RLG S + D F V PS+R D+E + DL+EE+ Sbjct: 410 VKMRVSRANRIIGVAIGADEIAQIFTRLGLSFERDGDTFSVMPPSYRFDIEIEEDLIEEV 469 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E Sbjct: 470 ARIYGFEKIPARP-PIATSEMRATNETQRS-IHAIRHALAARDYAETVNFSFVDAEWEQD 527 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYENDTP- 581 F G + ++NPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 528 FAGNSNPVRLINPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLHDPSI 587 Query: 582 -EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 G+ + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 588 KAGELTVEGFAQPKMIGALAYGPALDEQWGAPTRAVDFFDVKGDIEALVAPAVA----RF 643 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IP 695 HPGRS I+ + V G+ GE HP + + L + FE+ ++ +P Sbjct: 644 AKAEHPALHPGRSARIELNGRAV-GWIGELHPRWMQKYDLPHAPILFEIEAEALMHRVLP 702 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVF 750 I + +S PV+RD+A +VDQ I L++ ++ + + V +F Sbjct: 703 IPSE----------VSKFPPVRRDIAVVVDQKIEVQALLDELQKALSEPACKAVQKVALF 752 Query: 751 DVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D F+ KS L +KS+A +V +Q T +D+ + + + +VE + + A LR Sbjct: 753 DEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVYGARLR 810 >gi|54309335|ref|YP_130355.1| phenylalanyl-tRNA synthetase subunit beta [Photobacterium profundum SS9] gi|66773912|sp|Q6LQ73|SYFB_PHOPR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|46913771|emb|CAG20553.1| Putative phenylalanyl-tRNA synthetase, beta chain [Photobacterium profundum SS9] Length = 812 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 274/835 (32%), Positives = 431/835 (51%), Gaps = 56/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV++V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDEV--APVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + +VCGA N R+GL A G+ +P N + K+RG+ S G Sbjct: 59 ADKLQVTKIDIGEEALLDIVCGASNCRLGLTVAVATVGAVLP-GNFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGTALGMDVRELLELNDVAIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ + E I+ P +++ +EIK + C + VK + +P W Sbjct: 178 EVGVLNRADVTEPVIDAVAPSIDDTVSVEIKA----TDACPRYLGRVVKNINVKAESPIW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI A+VDITNYV L++G P H FD S+I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGIRSIDAVVDITNYVMLEQGQPMHAFDLSKIDGGIVVRLAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ + +VI+ + +IAGI GGK +G TTDVL+E A + P +I + G+ Sbjct: 294 ETELNSNTLVISDHTKALAIAGIFGGKDSGVTTETTDVLLEAAFFAPDHIRGRARAYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD ++ L++ +CGG + + + + P+ + +++ Sbjct: 354 TDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLG--FSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILR 465 L G ++P ED + IL RLG SV+ + + + + P+WR D+ + DL+EE+ R Sbjct: 414 DSLLGHEIPSEDVVEILTRLGCNVSVVDDSETTDAGWTATSPAWRFDIAIEQDLIEEVGR 473 Query: 466 IYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D I ++ P+ ++ D + + R V+ +L R E + +SF+ EQ L Sbjct: 474 IYGYDNIPNQAPVAALKMNDHKEANQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLV 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPE 582 G L + PISADMS MR L+ GLL N R + +FE + + E Sbjct: 531 VPGVEPLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEASAEN 590 Query: 583 G--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 G Q+ M AG+ G+ G E W + VD FD K D +++E + + F Sbjct: 591 GMRQEMMLAGVIAGTRGEEH----WDIDT----NTVDFFDLKGDLEAILELTANEKAYSF 642 Query: 641 ESGAPS------WYHPGRSGIIKTSA----EIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 ++ + HPG+S +I A E +G G HP + FGL+ FE+ Sbjct: 643 KALSSENKKQNPVLHPGQSAVIVVDAGLETEKEVGVIGTVHPELERKFGLNGRTIVFEIE 702 Query: 691 LDSIPISQKKRTKT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVT 748 +I T+ + V +S +RD+A +VD+ +G +V I + D Sbjct: 703 WAAI------NTRVLPEAVAVSKFPANRRDIAVVVDEAAASGDIVKACIAAGGEFLTDAK 756 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+ GK + EGKKS+AI + +Q ++ T D DI +D IV + ++ A LR Sbjct: 757 LFDVYVGKGVEEGKKSLAIALSLQSVERTLEDADISGAVDSIVAVLAERFGASLR 811 >gi|325982720|ref|YP_004295122.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] gi|325532239|gb|ADZ26960.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosomonas sp. AL212] Length = 790 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 266/820 (32%), Positives = 431/820 (52%), Gaps = 46/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ S +++ LT G+EVE ++ + + +V+SVER+P D Sbjct: 1 MKFSEIWLRSFVNPACSGDQLAHALTMAGIEVESIEPVASDFDNVIVAEVVSVERHPTAD 60 Query: 60 -CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 + + TGK +Q+VCGAPNV G+ A G+ +P N+++ K+RGI+S+G Sbjct: 61 RLYVCNVKTGKSDNDLLQIVCGAPNVSAGVRVPCALIGANLP--NLMIRKTKLRGIDSSG 118 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS KEL +S+ + ++ LP DAPVG Y +L D + +SLTPNR+DC+ V+G+A Sbjct: 119 MLCSGKELGISEVAEGLLLLPNDAPVGMDFRSYYQLEDRVFTLSLTPNRADCLSVQGVAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK-GFAMCCVKGVRN---NVA-P 231 ++ A + + +I P + E++ EI L+ + + C + +RN NV+ P Sbjct: 179 EVSA-----ITDTDIQLPFAIENVSDEINDTLNVYVIAPDACPLYCGRLLRNINLNVSTP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W+ QRL+ G+RSI+ +VDITNYV L+ G P H FD ++I+ + VR A S EKI L Sbjct: 234 LWLTQRLERSGIRSINPVVDITNYVMLEIGQPMHAFDLTKITGGSIQVRYAFSHEKIQLL 293 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + + DL+P+ ++I + + ++AGI+GG +G TTD+ +E A ++P I+ +L Sbjct: 294 NGDQVDLTPEMLLITDEHKPLALAGIMGGLESGVTYGTTDIFLESAFFNPTVISGKSFHL 353 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G +DS YRFERGVD + L+ LI S+CGG + +N + + Sbjct: 354 GFSSDSAYRFERGVDFETTRNALERASYLIHSICGGQTGTVIEIKNELPQRSSVDVRMER 413 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGV 469 +KR+ GID+ E RLGF E DK F V P++R D+ + D VEE+ RIYG Sbjct: 414 IKRILGIDLNREQIGNYFRRLGFK-FSEKDKCFSVIPPTYRFDLMIEEDFVEELARIYGY 472 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D I + P + Q + T +K+ L + EV+N+SF+ + Sbjct: 473 DHIPTY-YPYASMAMVPAPETQHTTTE-IKQTLINLDYQEVINYSFVDAGWEADLVDNHK 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + +LNPIS M+ MR++L+ GL+ N++R +FEV G ++ Sbjct: 531 PITLLNPISNQMNVMRSTLIGGLIANLQFNLNRKQVRVRLFEV----------GCCFLRE 580 Query: 590 GIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + SG + D S E+ R VD +D KAD +E S+ F+ + Sbjct: 581 DVSDCKQIEKISGLSYGDFSSEQWGIAARNVDFYDVKAD----VEVLCRGKSVEFKRFSH 636 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I I+ G+ GE HP + L FE+ L S+ K Sbjct: 637 PALHPGKSAEIYFEDRII-GWIGELHPRWQTKYSLQKNTILFELDLHSL-----KPRPLP 690 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 + +S PV+RD+A IVD I A +L++ ++ V +I D+++FD+++G + KKS Sbjct: 691 LIKEISKFPPVRRDIAIIVDNDISAYSLLSSMQAVKSTIISDISLFDIYRGNGMESNKKS 750 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +A +VL+Q + T D+ + + ++ + + A LR+ Sbjct: 751 LAFRVLLQDTEKTLTDEQVESAVTSLISILKNQFGAELRN 790 >gi|52425145|ref|YP_088282.1| phenylalanyl-tRNA synthetase subunit beta [Mannheimia succiniciproducens MBEL55E] gi|66773893|sp|Q65TL3|SYFB_MANSM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|52307197|gb|AAU37697.1| PheT protein [Mannheimia succiniciproducens MBEL55E] Length = 795 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 268/821 (32%), Positives = 438/821 (53%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ V+ E++CD +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVNTEQLCDQITMLGLEVDGVEAVAGEFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAIEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL +S+D + I+ELP DAPVG +YL L D I++SLTPNR+DC+ + G+A ++ Sbjct: 120 CSYRELGMSEDHSGIIELPADAPVGKDFREYLILDDKEIEISLTPNRADCLSIAGVAREI 179 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + E I+ P++S+ ++ ++ C + + VK V N P WM++ Sbjct: 180 GVVNQLAVTEPAINPVPVTSDE---KVAINVLAPEACPRYLLRSVKNVNVNAETPVWMKE 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+RSI +VDITN+V L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 237 KLRRCGIRSIDPIVDITNFVLLELGQPMHAFDAAKLAQPVQVRFAADGEELVLLDGTTAK 296 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L + +VIA ++AGI GG+ +G + T DV++E A + P+ I + G+ TDS Sbjct: 297 LQSNTLVIADQTGPLAMAGIFGGQASGVNAQTKDVILEAAFFAPLAITGRARQYGLHTDS 356 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRL 414 +RFERGVD + ++ SL++ +CGG +IC + T+ P+ K+ S++ L Sbjct: 357 SHRFERGVDFELQHKAMERATSLLVEICGGEVGEICEVVSETHLPKLNKVQLRRSKLDAL 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-K 473 G + E I RLG V E + + V+ SWR D+E + DL+EEI RIYG + I Sbjct: 417 LGHHIETETVTEIFHRLGLPVSYENEVWTVTSASWRFDIEIEEDLIEEIARIYGYNSIPN 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQRELE 532 + PL + + L+ SR +K L E + +SF+ K QS+L ++ + Sbjct: 477 NAPLAHLSMREHHESDLELSR---IKLALVGNDFHEAITYSFVDPKLQSILH--PEQAVW 531 Query: 533 IL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYM 587 IL NPIS++MS MR SLL GLL A N +R +FE + D Q+ + Sbjct: 532 ILPNPISSEMSAMRVSLLTGLLGAVVYNQNRQQNRVRLFETGLRFIPDESAEFGIRQELV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS----LRFESG 643 A + GS E W+ K+E D FD K IE +SL ++F + Sbjct: 592 FAAVMTGSRLSEH----WASKAEP----ADFFDLKG----YIENLLSLTKAGPYIKFVAK 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +HPG+S I E + GY G+ HP G++ E+ +D ++++ Sbjct: 640 EFPAFHPGQSAAIVLDGEEI-GYIGQLHPMAAQKLGINGKAFACELIVDK--VAERNVAN 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 K++ S KRDLA +V ++I A +++ + V + V +FDV+QG+ + EG Sbjct: 697 AKEI---SKFPANKRDLALVVAENIAASDILDACREVAGSKLTQVNLFDVYQGQGVPEGH 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + IQ + T +DDI ++ ++ + + NA LR Sbjct: 754 KSLAISLTIQDTEKTLEEDDINAVISVVLSELKDRFNAYLR 794 >gi|312884526|ref|ZP_07744230.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] gi|309367838|gb|EFP95386.1| phenylalanyl-tRNA synthetase subunit beta [Vibrio caribbenthicus ATCC BAA-2122] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 262/818 (32%), Positives = 416/818 (50%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ ++ VS +++ +T GLEV+ V S + V+ ++PD D Sbjct: 1 MKFSETWLREWVNPSVSTDELTHQITMAGLEVDDVLPVAGTFSGVKVGHVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDIGGDELLDIVCGAPNCRQGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL DA +G ++L L D IDV LT NR+DC +RG+A ++ Sbjct: 120 CSFTELGIDVESDGIMELSQDAEIGTDFREFLGLDDVTIDVDLTANRADCFSIRGMAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + P ++ + + C + +K V P WM Sbjct: 180 -----GVLNRADVTEPTVNPVAPAIDDQVSIQVQAPAACPRYLGRVIKNVDVKANTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ GLRSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD E Sbjct: 235 QEKLRRCGLRSIDPVVDITNYVLLEQGQPMHAFDLNKIDGGILVRMAEQGEKLTLLDGTE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ T Sbjct: 295 AELNADTLVVADHNKALAIAGIFGGEGSGVTSETKDVLLECAFFSPDHIRGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVK 412 DS RFERGVD + ++ L++S+CGG + + + + P ++ +++ Sbjct: 355 DSSMRFERGVDYALQMSAMERATELLVSICGGEVAPVVAVESESDLPSQNQVSLRRTKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + D + ILERLG +V + ++ P+WR D+ + DL+EE+ RIYG D I Sbjct: 415 SLLGHSIADSDVVEILERLGLTVETTQEGWKAVSPTWRFDIAIEQDLIEEVGRIYGYDNI 474 Query: 473 KSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 ++ P ++ D + ++ R V+ +L R E + +SF+ EQ L L Sbjct: 475 PNQSPAAALKMHDHKEANIPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLIVPDVEPL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYM 587 + PIS +MS MR L+ GLL N R +FE + + Q+ M Sbjct: 532 VLPFPISVEMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEHGLRFIPCESAENGMRQEAM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ GS E W ++ VD +D K D +++E + + F Sbjct: 592 LAGVISGSRNEEH----WDMETNT----VDFYDLKGDLEAILELSANEKAYSFAPAKHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT-KK 706 HPG+S I + V G G HP + FGL+ FE+ +I TK + Sbjct: 644 LHPGQSAAIVLDGKEV-GVIGTVHPELERKFGLNGRTIVFEIEWAAI------DTKVIPE 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 V LS +RD+A +VD+ I +G +V + ++ + D +FDV+ GK + EGKKS+ Sbjct: 697 AVQLSKFPSNRRDIALVVDESIASGDIVTSCLEQGGEFLKDARLFDVYVGKGVEEGKKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 757 AIALTLQSVERTLEDADISGAVDAIVSHVSEKFGASLR 794 >gi|119945140|ref|YP_942820.1| phenylalanyl-tRNA synthetase, beta subunit [Psychromonas ingrahamii 37] gi|119863744|gb|ABM03221.1| phenylalanyl-tRNA synthetase beta subunit [Psychromonas ingrahamii 37] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 265/820 (32%), Positives = 438/820 (53%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MKF+ +WL++ ++ +++ + + +T GLEV++V FT V +V+ +P+ Sbjct: 1 MKFSEAWLREWVNPEITRDALIHQITMAGLEVDEV--IPVAGKFTKVIVGEVVECGPHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +I+ G Q I +VCGA N R+GL A G+ +P + + ++RG S+G Sbjct: 59 ADKLQVTKINVGYDQLIDIVCGAKNCRLGLKVAVAVVGAVLP-GDFEIKEAELRGQPSSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CSE EL +S++S I+ELP APVG + L L D IIDV LT NR+DC+G+ G+A Sbjct: 118 MLCSESELGMSENSDGILELPQAAPVGTCVHKLLHLDDIIIDVDLTANRADCLGIAGLAR 177 Query: 177 DLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L ++++ P ++ ++ ++ ++ C + ++G+ P Sbjct: 178 EV-----GVLNSVSVTEPTWENAAVTLSEQVALNVQAPDACPRYLGRVIRGINQQAKTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM ++L+ G+RS+ A+VDIT YV L+ G+P H FD ++ + VR A EK+ LD Sbjct: 233 WMVEKLRRCGVRSVDAVVDITQYVLLEFGHPMHAFDLDKLEGGIEVRLAQVDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 ++ +L+ D +VIA + +IAGI GG +G TT++ +E A + P+ IA ++ G+ Sbjct: 293 KKVNLNSDTLVIADSQKALAIAGIFGGLDSGVSKGTTNIFLESAFFAPLAIAGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TD+ +R+ERGVD ++ L++S+CGG I A + + P + I S+ Sbjct: 353 HTDASHRYERGVDPVLQTKAMERATQLLVSICGGEVGPITEAYSDQHIPTQATITLRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL GI + + IL +LG V + +++ PS+R D+E + DL+EE+ R+YG D Sbjct: 413 LDRLIGISIDSDRVTTILTQLGCDVNLTTEGWDIIAPSYRFDMEIEEDLIEEVARVYGYD 472 Query: 471 QIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I + PL + L+ S+ V+ VL R E + +SF+ ++ + Sbjct: 473 NIPNVAPLASLIMASHNEARLKLSK---VRDVLVGREYQEAITYSFVDPDKQLKLHPEAD 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 L + NPIS DMS MR SL GLL++ +N R +FE + D + Sbjct: 530 ALILPNPISKDMSAMRVSLWTGLLESVSKNQKRQQNRVRLFETGLRFTKD-----ENAEN 584 Query: 590 GIRKG---SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 GIR+ S+ I G L + + R VD FD KAD ++++ S F++ S Sbjct: 585 GIRQEEMLSAVIVGD--LNDEHWDIATRPVDFFDLKADLQALLDLCADASSFEFKAEQHS 642 Query: 647 WYHPGRS-GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S GI + I GY G HP++ F L+ + FE+ L IS +K Sbjct: 643 ALHPGQSAGIYRDGKNI--GYIGTLHPSLSKPFALNGSVIVFEIELAH--ISTRKLPSAG 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKK 763 + + H RDLAF+VD+ + AG ++ I+ + +L+ + +FDV+QG+ + +GKK Sbjct: 699 DISKYPANH---RDLAFVVDEQLNAGNILKFIEEIGGTQLV-GINLFDVYQGQGVEKGKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI +++Q T + +I + +IVE V K NA LR Sbjct: 755 SLAIGLILQDTTRTLEEQEIADNVTKIVEAVSNKFNASLR 794 >gi|86146234|ref|ZP_01064559.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio sp. MED222] gi|85835945|gb|EAQ54078.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio sp. MED222] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 267/819 (32%), Positives = 420/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ + ++ E++ +T GLEV+ V+ FT VKV V ++PD Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVE--PVAGEFTGVKVGKVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +ID G+ + + +VCGA N R+GL A G+ +P + + K+RG+ S G Sbjct: 59 ADKLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GDFKIKKAKLRGVPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI + ++ + C + VK V +P Sbjct: 178 EV-----GVLNRADVTEPTVEAVATSIEDTVSVEIKATDACPRYLGRVVKNVDVKAESPI 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + +IAGI GG+ +G TTDVL+E A + P +I + G+ Sbjct: 293 NEAELNSNTLVIADHNKALAIAGIFGGQDSGVTTETTDVLLEAAFFAPDHIRGRARAYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + + + P+ + ++ Sbjct: 353 HTDSSLRFERGVDSTLQAAAMERATQLLVEICGGEVAPVNGSESEADLPKANVVALRRAK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G ++P D + IL RLG V + + PSWR D+ + DL+EE+ RIYG D Sbjct: 413 LDSLLGHEIPSTDVVEILTRLGCEVESTDAGWTATSPSWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ D + R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQAPKAALKMNDHKEAHQPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QK 585 L + PISADMS MR L+ GLL N R + +FE + + E G Q+ Sbjct: 530 PLILPFPISADMSAMRLGLIQGLLNTVVHNQKRQQSRVRLFESGLRFIPEATAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ G E W + VD FD K D +V+E + + F++ Sbjct: 590 MMLAGVISGTRGEEH----WDIAT----NTVDFFDLKGDLEAVLELSANEIAYSFKAAKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG++ I + V G G HP + FGL+ FE+ +I Sbjct: 642 PALHPGQTAAIIVDGKEV-GIIGTVHPELERKFGLNGRTIVFEIEWAAI-----NTRVLP 695 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + V +S +RD+A +VD+ + +G +V I + +FDV+ G+ + EGKKS Sbjct: 696 EAVAVSKFPANRRDIAVVVDEAVASGDIVEACIAAGGEFLTGAKLFDVYVGQGVEEGKKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q ++ T D DI +D IV ++ +K A LR Sbjct: 756 LAIALSLQSVERTLEDADIAGSVDAIVASISEKFGAALR 794 >gi|212711443|ref|ZP_03319571.1| hypothetical protein PROVALCAL_02516 [Providencia alcalifaciens DSM 30120] gi|212685899|gb|EEB45427.1| hypothetical protein PROVALCAL_02516 [Providencia alcalifaciens DSM 30120] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 271/817 (33%), Positives = 432/817 (52%), Gaps = 37/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ VS E++ D +T GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVSSEELSDQITMAGLEVDGVETVAGQFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DA +G + +YL+L D I++S+TPNR+DC+ + G+A D+ Sbjct: 120 CSYSELGISDDHSGIIELPQDAAIGTDIREYLKLDDHAIEISITPNRADCLSILGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 L E I+ S+ E+ P+ + + + C F +K + + P WM+ Sbjct: 180 AVINKLDLVEPAITSVASTIKETFPIRV----EAPAACPRFLGRVIKNIDVSAPTPMWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI A+VDITNYV L+ G P H +D R++ + VR A EK++ LD E Sbjct: 236 EKLRRGGVRSIDAVVDITNYVLLELGQPQHAYDLDRLNGSIIVRMAKDEEKLVLLDGTEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + + IAGI GG+H+G + T ++L+E A ++P+ I +N G+ TD Sbjct: 296 TLKSDTLVIADESQALGIAGIFGGEHSGVNAETKNILLECAFFEPLAITGRARNYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD Q ++ +LI+ +CGG +I + + P+ I ++ R Sbjct: 356 ASHRFERGVDSQLQFKAMERATALIVEICGGEVGEIIDVSSEAHLPKAANIKLTRKKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + + IL+RLG V D ++V PSWR D++ + DLVEE+ R+YG + I Sbjct: 416 LIGHVIADDIVTDILKRLGCQVQVSADCWDVVAPSWRFDMQIEEDLVEEVARVYGYNNIP 475 Query: 474 SEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 PL + D + L R +K +L R E + +SF+ + L + L Sbjct: 476 DVPLRADLIMTDHKEADLPLKR---IKAMLVDRGYQEAITYSFVDPKVQSLLHPQEEVLS 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG--QKYMA 588 + NPISADMS MR SLL GLL N +R +FE + +N G Q+ M Sbjct: 533 LPNPISADMSAMRLSLLTGLLGTVVYNQNRQQNRIRLFETGLRFTPDNQAEYGIRQENML 592 Query: 589 AGIRKGSSGIEGSGRLWS-DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G+ E WS DK + VD FD K D +V E L+ + F+S A Sbjct: 593 AGVITGNKFDEH----WSLDK-----QVVDFFDLKGDLEAVFELTGKLNQITFKSEAHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I E + G+ G HP + L+ FEV D+ I+Q+ + K + Sbjct: 644 LHPGQSAGIYLENEHI-GFIGVVHPELERKLDLNGRTVVFEVRTDA--IAQRVIPEAKAI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 S +RD+A +V +++ A ++ K V I + +FDV+ G+ + EG KS+A Sbjct: 701 SRYPS---NRRDIAVVVPENVAAAEVLAECKKVGINHIVGINLFDVYCGEGIAEGYKSLA 757 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I ++ Q + T +++I +D V + ++ A LR Sbjct: 758 ISLVFQDTQRTMEEEEITATVDLCVAALKQRFQASLR 794 >gi|327483917|gb|AEA78324.1| Phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae LMA3894-4] Length = 746 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 252/765 (32%), Positives = 394/765 (51%), Gaps = 40/765 (5%) Query: 54 RNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 ++PD D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG Sbjct: 6 QHPDADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQ 64 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +R Sbjct: 65 PSHGMLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIR 124 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A ++ G L +++ P + +I I D+ + C + VK V Sbjct: 125 GLAREV-----GVLNRADVTAPAVNAIAATINDTIAIDVKAPAACPRYLGRIVKNVNVQA 179 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ Sbjct: 180 QTPLWMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLT 239 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I + Sbjct: 240 LLDGSEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRAR 299 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVF 406 + G+ TDS RFERGVD ++ L++ +CGG + + A + KP ++ Sbjct: 300 SYGLHTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVAL 359 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S++ +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RI Sbjct: 360 RRSKLDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRI 419 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVL 523 YG + I ++ P+ + N++L +KRV L R E + +SF+ EQ L Sbjct: 420 YGYNNIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKL 474 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 475 VVPGVDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAE 534 Query: 584 ----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E + Sbjct: 535 NGMRQEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLELTAKGKAYS 586 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 F + HPG++ I + +G G HP + FGL+ FE+ ++I Sbjct: 587 FAATKHPALHPGQAAAIMVDGK-AIGVIGTVHPELERKFGLNGRTIVFEIEWNAI----- 640 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 + +S +RD+A +VD +I +G +V + L+ D +FDV+ GK + Sbjct: 641 NTRVIPEAAAISKFPANRRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGV 700 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+AI + +Q ++ T + DI ++ IV+ V + A LR Sbjct: 701 EEGKKSLAIALTLQSVERTLEETDIAAAVEAIVQAVSAQFGAALR 745 >gi|78222628|ref|YP_384375.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter metallireducens GS-15] gi|91208242|sp|Q39VS4|SYFB_GEOMG RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78193883|gb|ABB31650.1| phenylalanyl-tRNA synthetase beta subunit [Geobacter metallireducens GS-15] Length = 801 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 265/820 (32%), Positives = 436/820 (53%), Gaps = 36/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D D+S +++ D LT +GLEVE V + L + V ++P+ D Sbjct: 1 MIVTYNWLKEFVDFDLSPQELSDLLTMLGLEVEGVRHVGGGLDEVVVAVVEERSQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R++ GK + + +VCGA N + G A G+ +P + + KIRG ES GM+ Sbjct: 61 KLSLCRVNNGK-ETLAIVCGAQNFKAGDKVALAQIGAVLP-GDFKIKRSKIRGEESCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+ +S I+ LP D P+G + D L L D I ++ LTPNR+DC+ V GIA + Sbjct: 119 CSEKELGLAAESEGIIILPTDLPLGVPVFDALGLKDTIFEIGLTPNRADCLSVVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSESI-PLEIKFDL--DDSSLCKGFAMCCVKGVRNNVAPNWMR 235 +AA LG + + P ES+ P+ + + +DS LC + + G +P W+ Sbjct: 178 IAAKLGT--TVKYARPSVKESVVPISERAQVIVEDSDLCPRYTARYIAGCSIGPSPAWLV 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQE 294 +RL+AVG+RSI+ +VD+TNYV ++ G+P H FDA ++ + VRRA +GE+ LD QE Sbjct: 236 RRLEAVGMRSINNVVDVTNYVLMEYGHPLHAFDADLLAGGKIVVRRAAAGERFTTLDGQE 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ ++ I + ++AGI+GG+++ T+++L+E A ++P I R+ K LG+ T Sbjct: 296 RVLTESDLTIRDGEKGVALAGIMGGENSEIRQETSNILLESAYFNPSAIRRTSKRLGLHT 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVKR 413 +S +RFERG D+ ++ L SLI L GG + I PR+ V F + R Sbjct: 356 ESSHRFERGADVDILVTALDRAASLIAELAGGRVATGTIDVYPRPLPRRTVRFRVDQCNR 415 Query: 414 LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L GI + ++ I RL F V + E + F++ VPS R D+E + DLVEE+ R+ G + I Sbjct: 416 LLGIQLTADEMAAIFNRLEFKVNVVEPELFDIDVPSCRVDIEREIDLVEEVARLNGYNNI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQR 529 +P +V R + Q + ++ V+ + EV+ +SF++ ++ +L R Sbjct: 476 PVT-MPKARVFSDRP-TRHQRLEKQLRNVMVGQGFSEVITFSFMAPGILDKLLLAHDDPR 533 Query: 530 E--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQ 584 + + NP+ + S MRT+LLPGLL RN++ + +FE+ VY E + Sbjct: 534 RSVVRLRNPLVEEQSVMRTTLLPGLLDVAARNINYRMLTLRLFELRRVYLPAEGQELPRE 593 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 AGI G EG W+ + + VD +D K +++ F + + Sbjct: 594 PLHLAGIMTGVRYREG----WNQERHQ----VDFYDVKGVIEHILDEFAIGSVVFVQDRL 645 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 ++HPG++ I E+ LG FGE HP+I D FG+ + ++ + + + Sbjct: 646 DPYFHPGKACSILCGNEL-LGSFGELHPDIHDNFGIDQSVYYLDLDFEKLAMVSSDNVAI 704 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 K S RD+A ++ PA T+V I + R ++ +FD ++G + EG K Sbjct: 705 KPP---SRFPDTFRDIAMLIKDETPASTIVECISGLRIREVECAEIFDHYKGSHVPEGFK 761 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A+++ + + T D+++ L RIV+ +VKK +R Sbjct: 762 SIAVRIRYRSHERTLVDNEVTPLHQRIVDTLVKKLAVTIR 801 >gi|194435145|ref|ZP_03067379.1| phenylalanyl-tRNA synthetase, beta-subunit [Shigella dysenteriae 1012] gi|194416609|gb|EDX32744.1| phenylalanyl-tRNA synthetase, beta-subunit [Shigella dysenteriae 1012] gi|332093911|gb|EGI98964.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella dysenteriae 155-74] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/816 (31%), Positives = 428/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITSEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGALESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|297516678|ref|ZP_06935064.1| phenylalanyl-tRNA synthetase subunit beta [Escherichia coli OP50] Length = 795 Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust. Identities = 258/816 (31%), Positives = 426/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L +L + +I + ++ C + VKG+ P WM+++ Sbjct: 180 --AVLNQLPLVQPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+V +TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVGVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A R Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASSR 794 >gi|170695989|ref|ZP_02887127.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] gi|170139069|gb|EDT07259.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia graminis C4D1M] Length = 811 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 274/844 (32%), Positives = 433/844 (51%), Gaps = 75/844 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENN--MIVNVRK 108 D + +++ G + +VCGAPNV V L+G PP E + + K Sbjct: 59 ADKLNVCQVNAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D I ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTIFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCV 222 + V G+A + A L+ + I P+E+K + + LC F+ + Sbjct: 176 LSVFGVARETSAITGAPLRPLEIK--------PVEVKLNETLPVRISAPDLCGRFSGRVI 227 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 +GV +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR Sbjct: 228 RGVNARAKSPQWMIERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWG 287 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + L+ ++ VIA + I+S+AGI+GG +TT++ +E A W P Sbjct: 288 RKGETLKLLNGNTVEVDETVGVIADERHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPD 347 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +I + TD+ +RFERGVD + ++ I LIL +CGG A + + + Sbjct: 348 SIRGRSRKYNFSTDAGHRFERGVDYASTVEHIERITQLILDICGGEAGPVD-DQIVNVPQ 406 Query: 402 RKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 R+ V M S R+ G+ + ++ +I RLG + + D F V PS+R D+E + DL+ Sbjct: 407 REPVKMRVSRANRIIGVAIGADEIAQIFTRLGLTFERDGDTFSVMPPSYRFDIEIEEDLI 466 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RIYG ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E Sbjct: 467 EEVARIYGFEKIPARP-PVAKSEMRATHETRRS-IHTIRHALAARDYAETVNFSFVDAEW 524 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYEND 579 F G + + +LNPI++ +S MRT+L L+ N++R AD +FE V+ +D Sbjct: 525 EQDFAGNDKPVRLLNPIASQLSVMRTTLFGSLIHVLRTNLNRRAADRVRVFEAGRVFLHD 584 Query: 580 --------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 T EG Q M G+ G++ E G R VD FD KAD +++ Sbjct: 585 PSIKAGELTVEGFAQPKMIGGLAYGAALDEQWG--------APARTVDYFDVKADVETLL 636 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P + RF HPGRS I+ +G+ GE HP + + L + FE+ Sbjct: 637 APAAA----RFVKAEHPALHPGRSARIELDGR-AIGWIGELHPRWMQKYDLPHAPILFEL 691 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RLI 744 D+ + Q+ +V S PV+RD+A +VDQ I L++ ++ + + Sbjct: 692 EADA--LMQRVLPTPSEV---SKFPPVRRDIAVVVDQKIEVQALLDELQKAQSEPACKTV 746 Query: 745 DDVTVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 V +FD F+ KS L +KS+A +V +Q T +D+ + + + +VE + + Sbjct: 747 QKVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVYG 806 Query: 800 AVLR 803 A LR Sbjct: 807 ARLR 810 >gi|253582590|ref|ZP_04859811.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] gi|251835460|gb|EES64000.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium varium ATCC 27725] Length = 799 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 251/817 (30%), Positives = 439/817 (53%), Gaps = 35/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D + ++ + LT IG EVE +D + + L I +++ ++P+ D Sbjct: 5 MLISLDWLKQYVDIKEDINQLENALTMIGQEVEAIDVQGKDLDNVVIGQIVEYGKHPNSD 64 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ +++Q++CGAPN ++G V A G+ +P N + KIR +ES GM+ Sbjct: 65 KLTLLKVDIGEEEKLQIICGAPNHKLGDKVVVAKIGAVLP-GNFKIKKSKIRDVESCGML 123 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + +D I+ LP DAP+G Y + D I ++ +TPNR DC+ GIA ++ Sbjct: 124 CSQVELGIGEDKDGIIILPEDAPIGEEYRKYAGIDDVIFELEITPNRPDCLSHIGIAREV 183 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K + + ES K ++D CK + +K V +P W+++R+ Sbjct: 184 AAYYGRKVKYPSYALNEVIESTNNYAKVRVEDKERCKRYMGRVIKNVTVEESPEWLKKRI 243 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKILALDNQEYDL 297 +A+GL+ I+ +VDITN+V + P H FD ++ + V RA GEKI LD + +L Sbjct: 244 RAMGLKPINNIVDITNFVMFEYNQPMHAFDLDKLENKTVVVRAAEIGEKITTLDGVDREL 303 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA + + +IAGIIGGK + T ++ +EVA + P NI +S K LGI+TDS Sbjct: 304 NNGELVIADEVKPIAIAGIIGGKATQIEPETKNIFLEVAYFTPENIRKSAKKLGIVTDSG 363 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-VFMN-SEVKRLS 415 YR ERG+D++ + V+ +L+ + G D I + I KP+K + +N +++ Sbjct: 364 YRNERGIDIENISEVIDRAAALMAEVASGEVLDEVIDKYIE-KPQKFEIPLNINKLNNFI 422 Query: 416 GIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + + +IL LG + D V+ P++RQD+ DL EE++R+YG + I++ Sbjct: 423 GKKLEFDQVGKILTNLGLGIKTLSQDTLIVTPPAYRQDLTRSEDLYEEVIRMYGFENIEA 482 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 +P+ +E ++ S +K +L + EV+N++FI KE + + +EI Sbjct: 483 -IMPVEDIESGLK-DVKISVADNLKEILKEIGLHEVINYTFIPKEALDILKIKDKVIEIS 540 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+S DMS +R +L+ LL N++R + +EVS V+ P + +A + Sbjct: 541 NPLSEDMSIVRPTLVYSLLANIRDNINRNQFNLRFYEVSKVF---APAEE--LANEDLRI 595 Query: 595 SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 I G LW+ K E + + K ++E + + + E +HPGR Sbjct: 596 CIAISGKPERTLWNPKPES----YNFYTIKGYVEKLLE-YTGISRYKLERSTKEIFHPGR 650 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ-----KKRTKTKKV 707 S I+ +I+ G FGE HP++ + + VY+ I +++ K K ++V Sbjct: 651 SADIRIGNDII-GTFGEIHPDVQEAMDIKRE----RVYVADIDLTRALKYMKDAVKYERV 705 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 V V RDLA ++D+++ G +++ +K V LI+++ +FD+++G+ + KKSVAI Sbjct: 706 VKYPE---VTRDLAIVLDKNVLVGNMIDDLKKVSPLIENIDIFDIYEGEKIDADKKSVAI 762 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ K T + DI ++++++ + K N +R Sbjct: 763 SIVLRDKKKTLTEKDINNVIEKVLNTISKNYNGEIRQ 799 >gi|221134661|ref|ZP_03560964.1| phenylalanyl-tRNA synthetase subunit beta [Glaciecola sp. HTCC2999] Length = 794 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 259/828 (31%), Positives = 434/828 (52%), Gaps = 60/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M F+ +WL+++++ + + + + ++ GLEV+ ++ S + +V+ ++PD D Sbjct: 1 MIFSEAWLREYVNPALDTDALAEQISMAGLEVDGLEPVAGEFSGVVVGQVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R G+ A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKIDVGSEELLDIVCGAPNCRTGIKVAVACVGAVLP-GNFKIKKAKLRGQPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D IMEL APVG + +YL L D I+V LTPNR+DC+G+RG+A ++ Sbjct: 120 CSFSELGMGDSHDGIMELAESAPVGQDIREYLHLDDTAIEVDLTPNRADCLGIRGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKGVRNNV-AP 231 G L +++S P E +P ++ D LD C + + V +V +P Sbjct: 180 -----GVLNSLSVSYP---EIVPAKVTCDVSKQVHLDAPEACPRYLARVINNVDLSVPSP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+ ++L+ G+RSI +VD+TNYV L+ G+P H F+A +S + VR A E + LD Sbjct: 232 LWLVEKLRRSGIRSIDPVVDVTNYVLLELGHPMHAFNADSVSGDIHVRMAQPDEALTLLD 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E ++ + +VIA + + ++AGI GG H+G +T ++++E A + P I + G Sbjct: 292 ESEIKVNSNTLVIADENKALALAGIFGGLHSGVTADTKNIVLEAAFFAPDAILGKARQYG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNS 409 + TD+ +R+ERGVD Q ++ L+ + GG I A + ++ P+ ++ + Sbjct: 352 LHTDASHRYERGVDPQLQRDAMERATQLLTDIVGGEVGPIIEAVSESHVPQAAQVTLREA 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ GI +P E IL RLGF+V + +++ VSVP++R D+ + DL+EE+ R+YG Sbjct: 412 RLAKVIGISIPTETVTEILSRLGFAVEYKDNEWSVSVPAYRFDISIEEDLIEEVARVYGY 471 Query: 470 DQIKS-------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQS 521 + I + LP D+ L L Q +K VL + E + +SF+ K+QS Sbjct: 472 NNIPNVAPRASLSMLP----SDEATLHLNQ-----LKSVLLQQGYDEAITYSFVDPKKQS 522 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----E 577 LF G L + +PISADMS MR SL+ GLL+A G N R +FE + E Sbjct: 523 ALF-GDTPSLTLPHPISADMSVMRVSLVTGLLQAVGYNQKRQQPRVRLFETGLKFIAGDE 581 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + Q M AG+ SG + D S E R VD F K D +I+ ++ Sbjct: 582 SGNDVQQIPMIAGV--------CSGNVLKD-SYEAARSVDFFTIKGDVERLIKQTGQPEA 632 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 F HPG+ I E+V G+ G HP G+S + FE+ + S +S Sbjct: 633 FSFVPSTQGHLHPGQGADIVKDGEVV-GFIGALHPQFAKIMGVSGKVYMFEI-MQSALVS 690 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQG 755 + K +S KRD+A +V++++ +++ I + + +L+ D+T+FD++ G Sbjct: 691 R----VLPKAQPISKFPTNKRDIAIVVNENVSYAQIMSCISSLGIHQLV-DLTLFDIYTG 745 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+KS+AI + + + T + +I+ +++IV +V + A LR Sbjct: 746 DGIACGEKSLAISMTLSDPEKTLEEVEIQSCVEKIVAGLVSQLAATLR 793 >gi|289208102|ref|YP_003460168.1| phenylalanyl-tRNA synthetase subunit beta [Thioalkalivibrio sp. K90mix] gi|288943733|gb|ADC71432.1| phenylalanyl-tRNA synthetase, beta subunit [Thioalkalivibrio sp. K90mix] Length = 786 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 265/816 (32%), Positives = 434/816 (53%), Gaps = 42/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+ ++ WL++ L D + E++ LT GLE++ ++ A S + +V VE +PD D Sbjct: 1 MRISIQWLREWLQVDETPEELGHRLTMAGLELDAIEAAAPAFSGVRVGRVTKVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGAPNV G++ A G+ +P +N + K+RG+ S GM+ Sbjct: 61 RLRVCQVEAGEAEPLTIVCGAPNVHEGMVAPVAVVGAVLP-DNFKIKKSKLRGVASAGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L++D+ ++ LP D +G L L L D I++V LTPNR+DC+G+RGIA + Sbjct: 120 CSARELGLAEDAEGLLALPADLEIGADLRAALGLDDTILEVDLTPNRADCLGMRGIAREC 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L E ++ P+++E + + ++D+ C +A + G+ P WM +R Sbjct: 180 SALLDRPLAE-PMADPVAAE-LDERVAVRVEDAEACPLYAARVLDGLDARAPTPLWMTER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN-QEYD 296 L+ G+R +SA+VD+TNYV L+ G P H FDA R+ D + VR A SGE + L Q+ + Sbjct: 238 LRRAGVRPLSAIVDVTNYVMLELGQPLHAFDAGRVGDTIEVRWARSGESLTLLGGEQKVE 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ ++VIAS ++AGI+GG + DD+TT V++E A + P+ +A + G+ TD+ Sbjct: 298 LAEQDLVIASTTAPVALAGIMGGADSAVDDDTTRVVLECAHFAPLALAGRARAHGLHTDA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI--TYKPRKIVFMNSEVKRL 414 +RFERGVD + ++ L+L +CGG + A + ++ + I ++RL Sbjct: 358 SHRFERGVDPTLVEQAMERATRLLLEICGGQCGPVERAGELPSSHFDQPIRLRRPRIERL 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + RIL L V ++V P R D+E + DL+EE+ R++G D++ Sbjct: 418 LGTTFEDAEVERILGALACRVESVEGGWQVRAPRARFDLEREEDLIEELARVHGYDRLPQ 477 Query: 475 E-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P P+ E R+ SL R ++ LA + EV+++SFI E S F L + Sbjct: 478 RLPSPVAPAE--RSPSL-----RGLRDQLARQGFHEVISFSFIDAEASRAFYPAVEPLAL 530 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPIS+D++ MR L PGL+ N R D + E + D A+G+R+ Sbjct: 531 ANPISSDLAVMRPGLWPGLVATAAYNQARQQPDLRLCEHGLRFVPD--------ASGLRQ 582 Query: 594 GS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS-LRFESGAPSWYH 649 +G+ G GR + E R VD FDAK V+E SLD L F S H Sbjct: 583 EPRLAGLLG-GRAHPEHWEAPSRRVDFFDAK----GVVEGLCASLDGPLGFRSEKHPALH 637 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 G+S I + + +G+ G HP + F + VYL + T + Sbjct: 638 DGQSARI-LAGDRPIGWVGRLHPALCKQFDVEP------VYLFDLDARAILHTPVVQFAP 690 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS ++RDLA +V + +PAG +++ I+ + L+ DV +FDV+QGK L +KS+A+ Sbjct: 691 LSPYPSIRRDLALVVKETVPAGDVLSAIEELALGLVQDVRLFDVYQGKGLNPDEKSLALG 750 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ T + D+ + D++VE++ + A LR Sbjct: 751 LILRAFDRTLGEQDVASVTDKVVEHLHARFQATLRQ 786 >gi|167582113|ref|ZP_02374987.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia thailandensis TXDOH] Length = 810 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 261/827 (31%), Positives = 425/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ ++D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTYVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D +M LP D PVG + D L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I + + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVRAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PRWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTVELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIDEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVARSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFIADPAVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P V+ RF S Sbjct: 593 VEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA----RFVKAEHS 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSSTSS 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|320353541|ref|YP_004194880.1| phenylalanyl-tRNA synthetase subunit beta [Desulfobulbus propionicus DSM 2032] gi|320122043|gb|ADW17589.1| phenylalanyl-tRNA synthetase beta subunit [Desulfobulbus propionicus DSM 2032] Length = 815 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 273/830 (32%), Positives = 433/830 (52%), Gaps = 45/830 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 MKFTLSWL + T ++ +I D LT +GLEV+ V+ A L+P T+ +V V ++PD Sbjct: 1 MKFTLSWLNQFISTAGMTSAQIADQLTMLGLEVDSVEELSAHLAPITVARVTEVSQHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +DTG+ + +QVVCGAPNVR G+ A PG +P+ I K+RG+ S GM Sbjct: 61 DKLTVCVVDTGE-EIVQVVCGAPNVRPGMFTAIAKPGVKLPDGTKIKK-SKVRGVVSAGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL L+DD + I++L G L + L+L D +I+V LTPNR DC VRGIA + Sbjct: 119 LCSARELGLNDDHSGILDLQGPFAPGLPLVEALDLRDTVIEVDLTPNRPDCASVRGIARE 178 Query: 178 LVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + + G LK + PL+ ++I E+ +DD +LC + + V +P WM+Q Sbjct: 179 VGSFTGGVLKPLVAQVTPLTGKNIDFEVI--IDDPTLCPRYTARKLINVTIGPSPRWMQQ 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGE-KILALDNQE 294 RL AVG+R I+ +VDITNYV L+ G P H FD + + D + VRR E I LD + Sbjct: 237 RLSAVGMRPINNIVDITNYVMLESGQPMHAFDFATLRDSKIIVRRPTVQETSITTLDGSQ 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD ++I ++AG++GG D TT +L+E A ++P++I R+ + LGI + Sbjct: 297 RQLDPDMLLICDGQGPIAVAGVMGGLDTEITDRTTTILLESACFNPVSIRRTARKLGIPS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 +S YRFERGVD L+ V L++ G A I KP ++ + V R+ Sbjct: 357 ESSYRFERGVDPNLADIALERAVELMVEYAGAQADPDGIDVYPGKKP--LLTLQLRVNRV 414 Query: 415 SGI------DVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 G+ + D LR +E F+V + EV VPS+R D+E + DL+EE+ R+ Sbjct: 415 CGLLGMELNRDQVADYLRSIE---FAVTALDEATLEVVVPSFRIDIEREVDLIEEVARLV 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----SVL 523 G + I + LPL +++ + L+ R + + R+L ++ E +N+SF+S+ + Sbjct: 472 GYNSIPTA-LPLIRMDYPKRDDLRALR-QDIARILTAQGFFEAINYSFVSEHHLDICRLA 529 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 +R++ +LNP+S + + MR+ LLPGLL+ RN++ D +FE ++ N Sbjct: 530 ENDARRQVTRLLNPLSEEQAVMRSMLLPGLLENVRRNINFQCPDIRLFETGKIFLQQQPN 589 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 PE + Y+ A + SG + + F D+ A A+ L V+ + + Sbjct: 590 ALPEERLYLCAVM----SGQRYPKAEPFYHANQEIDFFDVKGAAANLLQVLRMTGNDQAP 645 Query: 639 RFESGA---PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 F A + PG S I +IV+G G HP L F + P+ E+ L + Sbjct: 646 LFRQVAELTQPYSDPGCSVAI-MDGDIVIGSVGRVHPETLKGFAIKQPVYFLEIDLQHL- 703 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ 754 K+ L VKRD + +V H+PAG L+ I+ + ++ +FDV++ Sbjct: 704 --MNLNRVPKQFKTLPKFPSVKRDASLVVPDHVPAGELLVAIRTQRQKYLESAEIFDVYR 761 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GK + G KSV++ + T D + + D++++ ++ NA R Sbjct: 762 GKPIQAGYKSVSLSFTYRSETATLDDQSVDKIHDKLMKLLMADFNACYRQ 811 >gi|262369832|ref|ZP_06063159.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter johnsonii SH046] gi|262314871|gb|EEY95911.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter johnsonii SH046] Length = 793 Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust. Identities = 259/818 (31%), Positives = 417/818 (50%), Gaps = 38/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ V + D LT +GLEV+ D A PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAVDSNTLSDQLTMLGLEVD--DLSPAAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVRVG+ A G+ +P + + K+RGIES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRVGMKAPVATIGAVLP-GDFKIKKGKLRGIESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++EL +DAPVG + +YL L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELAVDAPVGADIREYLNLDDHVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PN 232 ++ G + ++ ++ P + SI E K + C + +K V A P Sbjct: 178 EI-----GVINQLTVTAPEINAVAASIADEKKVVVSTEG-CPRYLGRVIKNVNTKAATPE 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM + L G+R S LVDITNYV ++ G P H FDA++I + VR+A EK++ L+ Sbjct: 232 WMERALVRSGIRQHSILVDITNYVLMELGQPLHAFDAAKIQGSVQVRQANMAEKLVLLNE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L+ +VIA DG+ +IAGI+GG + D T D+ +E A + P+ IA ++ G+ Sbjct: 292 QEVELNEKVMVIADDGKALAIAGIMGGLSSSVTDETQDIFLESAFFAPLAIAGRARSFGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TD+ R+ERGVD + + + LI L GG I A P++ I + Sbjct: 352 HTDASQRYERGVDFELPMLAMHRASQLIAELAGGEFGPITTAEQAAVLPKREAIELEQVQ 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G V L RLG +V + ++ V PS R D+ DL+EE+ RI+G Sbjct: 412 VDQLLGYRVDAAFIADALTRLGCAVTVKAEGQWSVVPPSHRYDMVIYQDLIEEVARIHGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D I+ + L ++E K Q +++ L + E +++SF + Sbjct: 472 DNIQ---ISLPKIEAKLAQYQDQFEMAQLRQTLVTLGYQEAISFSFADLKLEKQLNAAVN 528 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 L + NPIS+D++ MR++LL L+ NV+R + FE+ ++ E + Sbjct: 529 PLALANPISSDLAVMRSTLLSSLIPCVQYNVNRQQSRVRFFELGLRFDYQDAESIHDLK- 587 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWY 648 + + + +G S+ + + +D FD K + V+ V ++ +R E SW Sbjct: 588 --QIPTLAVIATGAKTSETWHAKPQAMDFFDFKGEIEEVLAAGRVQVEYVRSER---SWL 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S + + + GYFG HP++ D LS ++ + S +T Sbjct: 643 HPGQSAEVLVDGQSI-GYFGRLHPSLEDALDLST------TWVAELDQSAVLQTYVSNFT 695 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 LS V+RD+A ++ I + +I+ L+D +FDV+ G+ + +GK+S+A Sbjct: 696 ELSRFPSVRRDIALLISDKINVSEIQQLIEKTGVELLDSTWLFDVYTGQGVEDGKRSLAF 755 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +L Q T D +I+ MD I++ + A LR+S Sbjct: 756 ALLWQHPSRTLEDAEIKSGMDHILQVLENTYQATLRAS 793 >gi|253577244|ref|ZP_04854563.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] gi|251843358|gb|EES71387.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus sp. oral taxon 786 str. D14] Length = 813 Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust. Identities = 261/836 (31%), Positives = 441/836 (52%), Gaps = 57/836 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 MK + WL D++ D V++E++ + +T G+E++ ++NR + +S + V S E++PD Sbjct: 1 MKVSTEWLSDYISLDGVNVEELAEQITRSGIEIDSIENRNQGVSNVVVGFVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNICVVDAGQGEDLQIVCGAKNVAAGQKVPVALVGAKLP-GGLEIKKAKLRGVLSQGM 119 Query: 118 MCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL L+D I+ LP + +G ++ L L D ++D LTPNRSDC+ + Sbjct: 120 ICSAKELGLNDKLLPKEQQEGILVLPEEVEIGTPITQLLGLDDKVLDFDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCP-LSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 G A + V A L + E+ + P L+S + + I+ +D LC +A+ + V+ Sbjct: 180 IGAAYE-VGAILNR--EVKLPQPELASSGVLAKERIQVKIDAPELCSRYAVRYIADVKVG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P WM+ RL A G+R IS +VDITNYV L+ G P H FDA +I+ +L VR+A +GEK+ Sbjct: 237 PSPLWMQNRLMAAGIRPISNIVDITNYVMLEYGQPLHAFDADKIAGGMLGVRQAKAGEKL 296 Query: 288 LALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD QE +L ++I + R ++AG++GG D T ++++E A + ++ R+ Sbjct: 297 VTLDGQERELEAGALLIVDGEDRPVALAGVMGGLDTEVTDQTVNLVLESAKFAGASVRRT 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + LG+ +++ RFE+ VD +IP L SL+ + GG ++ + + K++ Sbjct: 357 SRTLGLRSEASQRFEKEVDPASVIPALNRAASLMAAYAGGQVAEGIVEIVHQEQEEKVIA 416 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ ++ G ++ ++ IL RL F G + EV VP+ R D+ DL+EE+ R Sbjct: 417 LSLQKLNDYLGTNISSLEAKTILGRLRFECAGSEEVIEVRVPTRRGDITRDVDLIEEVAR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF- 524 +YG D I E + V + Q+ R ++++L EV+ +SFI + S F Sbjct: 477 LYGYDNI--EATMIEGVTTVGGYTKPQALRRTIRQLLTHGGWQEVMGYSFIREGASAKFP 534 Query: 525 --GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 G G RE+ + P+S D S +R SLLPG++ N +R + A+FE+ V+ + Sbjct: 535 QLGEGDREIRLAMPMSEDRSVLRGSLLPGMIDIAVYNRNRKQDNLALFEIGSVFRTKEEK 594 Query: 583 GQK---------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 K + AG R + + W+ +E+ VD FD K S+ E Sbjct: 595 LTKQPSELPVLSLLLAGER--------AEKRWNAPAEK----VDFFDLKGALESLFEYLG 642 Query: 634 SLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + + +E+ P +HPGRS I TS + +G G+ HP + L + Y Sbjct: 643 VAERMTYEADGPQGFHPGRSASIFLNGTSGKERIGTLGQLHPELQRELDLDD------TY 696 Query: 691 LDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDV 747 + + + R + V+ L ++RD+A +V+ + AG L+ +I+ L++ V Sbjct: 697 VAELLLEPLYRYAGEAYVYQELPRYPAMQRDIAVVVNSDVEAGALIGVIREKAGELLESV 756 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VFDVF G LGEGKKSVA+ ++ + ++ T D+++ + DR+VE + + A LR Sbjct: 757 EVFDVFTGAKLGEGKKSVALSLVYRHMERTLTDEEVAAVHDRVVEGLSQTFAAELR 812 >gi|153833688|ref|ZP_01986355.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] gi|148869967|gb|EDL68927.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio harveyi HY01] Length = 801 Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust. Identities = 264/823 (32%), Positives = 415/823 (50%), Gaps = 43/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ VS +++ +T GLEV+ V + + + KV+ ++PD D Sbjct: 1 MKFSESWLREWVNPAVSTDELTHQITMAGLEVDDVLPVAGSFTGVKVGKVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGA N R+G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGAEELLDIVCGASNCRLGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGMAREV 179 Query: 179 VAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 + E +N P + + +E+K + C + VK V P WM+ Sbjct: 180 GVLNRADVTEPAVNAVAPAIDDQVSIEVKA----PAACPRYLGRVVKNVNVQAETPLWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN+V L+ G P H FD ++I + VR A GEK+ LD E Sbjct: 236 EKLRRCGIRSIDPVVDITNFVLLELGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGNEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ TD Sbjct: 296 ELNADTLVVADHNKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S RFERGVD ++ L++ +CGG + + + P+ + +++ Sbjct: 356 SSMRFERGVDFALQTSAMERATELLVEICGGEVAPVVAVESEADLPKANTVSLRRTKLDS 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D I Sbjct: 416 LLGHHIADSDVVEILERLGLTVETTEAGWTATAPTWRFDIAIEQDLIEEVGRIYGYDNIP 475 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 ++ P ++ D ++ R V+ +L R E + +SF+ EQ L G L Sbjct: 476 NQNPAAALKMHDHVEANIPLKR---VRNLLVDRGYQEAITYSFVEPEQQKLVVPGVEPLI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMA 588 + PISADMS MR L+ GLL N R +FE + + Q+ M Sbjct: 533 LPFPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQEPML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF------ES 642 AG+ G+ S W ++ VD FD K D +V+E + + F + Sbjct: 593 AGVIAGTR----SEEHWDIETNT----VDFFDLKGDLEAVLELTANEAAYSFAALSAEDK 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 A HPG+S I + V G G HP + FGL+ FEV +I T Sbjct: 645 AANPALHPGQSAAIIVDGKQV-GVIGTVHPELERKFGLNGRTIVFEVEWSAI------NT 697 Query: 703 KT-KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGE 760 K + V LS +RD+A +VD+ + +G +V ++ + D +FDV+ GK + E Sbjct: 698 KVIPEAVQLSKFPSNRRDIAVVVDEAVASGDIVAACLEQGGEFLKDAKLFDVYVGKGVEE 757 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+AI + +Q ++ T D DI +D IV +V +K A LR Sbjct: 758 GKKSLAIALTLQSVERTLEDADIAGAVDAIVAHVSEKFGASLR 800 >gi|254252553|ref|ZP_04945871.1| Phenylalanyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] gi|124895162|gb|EAY69042.1| Phenylalanyl-tRNA synthetase beta subunit [Burkholderia dolosa AUO158] Length = 809 Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust. Identities = 268/822 (32%), Positives = 419/822 (50%), Gaps = 48/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LSDD ++ LP D PVG + + L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSDDHRGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E ++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDDTLPVRIA----APDLCGRFSGRVIRGVNARA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR A GE + Sbjct: 235 KTPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWAKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILDICGGKAGPVD-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIASIFTRLGLPFEQDGDVFSVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DAPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRAERVRVFETGRVFLADPSAKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 TVEGYAQPKRVGALAYGPAVEEQWGVATRAVDFFDVKGDLEALLAPAVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARALPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALADDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 LG +KS+A +V +Q T +D+ ++DR ++ +V++ Sbjct: 762 GGLGAHEKSLAFRVTLQDTAGTLQDE----VVDRAIQTLVER 799 >gi|167562962|ref|ZP_02355878.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia oklahomensis EO147] Length = 810 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 421/818 (51%), Gaps = 46/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +V+ V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVIEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G +Q+VCGAPNV V L+G PP E + + K+R Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGAEP-FAIKLSKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LSDD + +M LP D PVG + D L L D + ++ LTPN++DC+ Sbjct: 118 GVESQGMLCSARELRLSDDHSGLMILPEDTPVGEDIRDTLSLDDTVFEIKLTPNKADCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 178 VFGIARETAAITGAPLTAPDIRPVLTELTETLPVKISAPD--LCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMIERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGRRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGSTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + R R V M Sbjct: 356 YNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVD-DRIANLPQRAPVAMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RI+G Sbjct: 415 SRANRIIGVEIGEDEVAQIFTRLGLAFERDGDVFSVTPPPHRFDIEIEEDLIEEVARIHG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATDETRRS-IHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRADRVRVFETGRVFIADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P V+ RF + Sbjct: 593 VEGYAQPKRFGALAYGPVIEEQWGAATRQVDYFDVKGDLEALLAPVVA----RFVKAEHA 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-VARTLSVPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSS 762 Query: 758 -LGEGKKSVAIQVLIQ----PLKDTFRDDDIRILMDRI 790 L +KS+A +V +Q L+D D I+ L+DR+ Sbjct: 763 GLSAHEKSLAFRVTLQDPAGTLQDEMVDQAIQTLVDRM 800 >gi|300114469|ref|YP_003761044.1| phenylalanyl-tRNA synthetase subunit beta [Nitrosococcus watsonii C-113] gi|299540406|gb|ADJ28723.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosococcus watsonii C-113] Length = 792 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 258/817 (31%), Positives = 423/817 (51%), Gaps = 40/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ +D D+S E + + LT GLEVE + A K+++V+ +P Sbjct: 1 MKFSEAWLRTWVDPDISRENLVERLTLAGLEVESTEPVAATFKGVKAAKIVAVKPHPSAH 60 Query: 60 C-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP---PGSCIPENNMIVNVRKIRGIEST 115 C I ++D G + VVCGAPN RVGL WAP G+ +P I V ++G++S Sbjct: 61 CLQICQVDIGSDSLLTVVCGAPNARVGL---WAPLAIVGAQLPAGIRIEPV-TLQGVKSF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L++ SA ++ELP A G L ++L+L D I++ LTPNRSDC+ V GIA Sbjct: 117 GMLCSAAELGLAEQSAGLLELPEGASPGTDLHEFLQLDDISIEIDLTPNRSDCLSVAGIA 176 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNV-A 230 ++ G L + ++ P + E + +I+ + + C + ++GV Sbjct: 177 REV-----GVLTQSPVTEP-AIEPVTAQIEDIFPVTVAAPAACPRYLGRVLRGVNPQTQT 230 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W+R+RL+ GLRS+ +VD+TNYV L+ G P H FD R+ + VR + E + L Sbjct: 231 PWWLRERLRRSGLRSLGLVVDVTNYVMLELGQPMHAFDLERLKGGIQVRYGQADEALTLL 290 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D L + +VIA R ++AGI+GG+ +G ++ T + +E A ++P IA + Sbjct: 291 DGTPLRLDEETLVIADQQRALALAGIMGGEESGINNQTRHLFLESAFFNPSVIAGRARFY 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 G+ TDS +RFERGVD + ++ +L+L + GG A + + + P + I+ Sbjct: 351 GLHTDSSHRFERGVDSELPRRAMERATALLLEIAGGQAGPVIEVVDSSQLPPQATIILRK 410 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + R+ G+++ L RLG V + +E VPS+R D+ + DL+EE+ R+YG Sbjct: 411 ARIHRVLGVEIAESRITEQLTRLGLEVERIEEGWEAKVPSFRFDLALEVDLIEELGRLYG 470 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ S P+ Q++ R +++VL R E + +SF+ + L + Sbjct: 471 YDRLPST-RPVGQIQPVLKTEAGVFIDR-IRQVLVDRDYQEAITYSFVDQGLQQLLDPDE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYM 587 L + NPIS DM+ MRT+L PGL++A N R FE + T Q+ Sbjct: 529 SPLALNNPISTDMAVMRTTLWPGLIQALQYNSYRQQERIRFFEHGLTFNGQLTDLKQERT 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G+S E W S R D FD K D +++ + F + + Sbjct: 589 VAGLISGASYPEQ----WGLAS----RPADFFDLKGDVEAILALGGQRNCFEFVAASHPA 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I ++V G+ G HP + LS+ YL S+ + +R Sbjct: 641 LHPGQSAQILREGQVV-GWLGALHPLLESKLDLSS-----RAYLFSLRLEAVERGSLPVF 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 LS ++RD+AF+VD +IP + + +K + ++ ++ +FDV+ GK + KKS+A Sbjct: 695 QSLSKFPAIRRDIAFLVDTNIPVQAVFDCLKGCESDILKELQLFDVYTGKGIDPDKKSLA 754 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ ++Q T DD + I ++R+V +V + A++R Sbjct: 755 LKFILQHPSYTLTDDKVNIFIERVVALLVAELGAIMR 791 >gi|183598821|ref|ZP_02960314.1| hypothetical protein PROSTU_02253 [Providencia stuartii ATCC 25827] gi|188021029|gb|EDU59069.1| hypothetical protein PROSTU_02253 [Providencia stuartii ATCC 25827] Length = 795 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 269/819 (32%), Positives = 425/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 MKF+ WL++ ++ +S E + + +T GLEV+ V+ FT V V V ++P+ Sbjct: 1 MKFSELWLREWVNPAISSEALSEQITMAGLEVDGVE--PVAGQFTGVVVGEVVECGQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL +SDD + I+ELP+DAP+G L DYL+ D II++S+TPNR+DC+ + G+A Sbjct: 118 MLCSFSELGISDDHSGIIELPLDAPIGTDLRDYLKFDDSIIEISITPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 D+ L I ++ + I+ + ++ C F +K + + P WM+ Sbjct: 178 DVAVINKQALTAPKIEAVKATTTDTFPIRVEAPEA--CPRFLGRVIKNIDVSAPTPMWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI A+VDITNYV L+ G P H +D R++ + VR A EK++ LD E Sbjct: 236 EKLRRGGVRSIDAVVDITNYVLLELGQPQHAYDLDRLNGAIVVRMAKQDEKLVLLDGSEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D +VIA + IAGI GG+H+G + T ++L+E A ++P+ I +N G+ TD Sbjct: 296 TLNADTLVIADEKNPLGIAGIFGGEHSGVNSETKNILLECAFFNPLAITGRARNYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD + ++ LIL +CGG DI + + P+ I +++ R Sbjct: 356 ASHRFERGVDPELQFKAIERATQLILDICGGEVGDIIDVTSSAHLPKVAHITLTRNKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + + IL RLG V +++V PSWR D++ + DLVEE+ R+YG + I Sbjct: 416 LIGYAIADDVVTDILTRLGCQVKASEGRWDVVAPSWRFDMQIEEDLVEEVARVYGYNNIP 475 Query: 474 SEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 PL V K NL L++ +K +L + E + +SF+ + L Q Sbjct: 476 DVPLRADLVMTKHKEANLPLKR-----IKAMLVDKGYQEAITYSFVDPKVQALLHPEQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPISADMS MR SLL GLL N +R +FE + D Q+ Sbjct: 531 LVLPNPISADMSAMRLSLLTGLLTTVVYNQNRQQNRIRLFETGLRFIPDNQAEYQIRQET 590 Query: 587 MAAGIRKGSSGIEGSGRLWS-DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ E WS DK + VD FD K D +V+E L+ + F+ Sbjct: 591 MLAGVIAGNRFDEH----WSLDK-----QVVDFFDLKGDLEAVLELTGKLNQITFKPEVH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I E + G G HP + L+ FEV D+ I+ + K Sbjct: 642 PALHPGQSAGIYLENEHI-GIIGVVHPELERKLDLNGRTVVFEVRCDA--IAHRAIPDAK 698 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 + S +RD+A +V +++ A ++ K V I + +FDV+ G+ + +G KS Sbjct: 699 AISRYPS---NRRDIAIVVPENVAAADVLAECKKVGINHIVGINLFDVYCGEGIADGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI ++ Q T +++I +D + + ++ A LR Sbjct: 756 LAISLVFQDTTRTMEEEEITATVDLCIAALKQRFQASLR 794 >gi|167570151|ref|ZP_02363025.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia oklahomensis C6786] Length = 810 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 421/818 (51%), Gaps = 46/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +V+ V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVIEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G +Q+VCGAPNV V L+G PP E + + K+R Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGAEP-FAIKLSKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LSDD + +M LP D PVG + D L L D + ++ LTPN++DC+ Sbjct: 118 GVESQGMLCSARELRLSDDHSGLMILPEDTPVGEDIRDTLSLDDTVFEIKLTPNKADCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 178 VFGIARETAAITGAPLTAPDIRPVLTELTETLPVKISAPD--LCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMIERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGRRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGSTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + R R V M Sbjct: 356 YNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVD-DRIANLPQRAPVAMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RI+G Sbjct: 415 SRANRIIGVEIGEDEVAQIFTRLGLAFERDGDVFSVTPPPHRFDIEIEEDLIEEVARIHG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATDETRRS-IHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRADRVRVFETGRVFIADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P V+ RF + Sbjct: 593 VEGYAQPKRFGALAYGPVIEEQWGAATRQVDYFDVKGDLEALLAPVVA----RFVKAEHA 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-VARTLPVPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSS 762 Query: 758 -LGEGKKSVAIQVLIQ----PLKDTFRDDDIRILMDRI 790 L +KS+A +V +Q L+D D I+ L+DR+ Sbjct: 763 GLSAHEKSLAFRVTLQDPAGTLQDEMVDQAIQTLVDRM 800 >gi|300716464|ref|YP_003741267.1| Phenylalanyl-tRNA synthetase beta chain [Erwinia billingiae Eb661] gi|299062300|emb|CAX59417.1| Phenylalanyl-tRNA synthetase beta chain [Erwinia billingiae Eb661] Length = 795 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 260/816 (31%), Positives = 420/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSAALSEQITMAGLEVDGVEAVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DA VG + ++L+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPLDAAVGTDIREFLKLDDSTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +IS +++ I+ D ++ C + VKG+ A P WM+++ Sbjct: 180 AVLNKMTLTEPDISPVVATVQDTFPIRVDAKEA--CPRYLGRVVKGINVKAATPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITN+V L+ G P H FD R+ + VR A E + LD E L Sbjct: 238 LRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRLEGGIVVRLAEESELLTLLDGTETKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++ GI GG+H+G ++ T +VL E A ++P++I ++ G+ TD+ Sbjct: 298 KADTLVIADHQKALAMGGIFGGEHSGVNEETRNVLFECAFFNPLSITGRARSYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD Q ++ L+L +CGG A + N P++ I ++ RL Sbjct: 358 HRYERGVDPQLQFKAMERATRLLLDICGGEAGPVIDVTNEETLPKRATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G V + IL RLG V ++ P WR D+E + DLVEE+ R+YG + I Sbjct: 418 GHVVSDDQVSDILRRLGCEVTEGEGFWQAVAPGWRFDMEIEEDLVEEVARVYGYNNIPDV 477 Query: 476 PLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + K NLSL++ VK +L + E + +SF+ + L G+ L Sbjct: 478 PVQAGLIMTKHREANLSLKR-----VKSMLVDKGYQEAITYSFVDPKIQALLHPGEENLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL A N +R + +FE + DT Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLSAVVYNQNRQQSRVRLFESGLRFVPDTQANLGIRQDVML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W + VD +D K D SV+E L ++F + A Sbjct: 593 AGVISGTRNEEH----WDLARQA----VDFYDLKGDLESVLELTGKLSEIQFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + + G+ G HP + L+ FE+ D +S + + Sbjct: 645 HPGQSAAIYLRGDRI-GFIGVVHPELERKLDLNGRTVVFELEWDK--VSDRVLPDASGI- 700 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++PA ++ K + V +FDV++GK + EG KS+AI Sbjct: 701 --SRFPANRRDIAVVVAENVPAADIITECKKVGVNQVVGVNLFDVYRGKGVNEGFKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +D+I + + VE + ++ A LR Sbjct: 759 SLILQDTARTLEEDEIAATVAKCVEALKERFQASLR 794 >gi|329907562|ref|ZP_08274685.1| Phenylalanyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] gi|327546939|gb|EGF31845.1| Phenylalanyl-tRNA synthetase beta chain [Oxalobacteraceae bacterium IMCC9480] Length = 809 Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust. Identities = 267/836 (31%), Positives = 438/836 (52%), Gaps = 59/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F+ SWL+ ++ ++ + + LT GLEVE+V+ PF+ V KVL + R+P+ Sbjct: 1 MQFSESWLRSMVNPTMTSDALSHLLTMSGLEVEEVN--PVAPPFSHVVVGKVLELVRHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + ++D G + +VCGAPNVR G+ V A G+ +P + + V ++RG+ Sbjct: 59 ADRLNVCQVDVGTGTLLNIVCGAPNVRAGMKVVCAIVGAVLPPGDDGKPFEIKVGQLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS KEL LSD+++ +++LP DAPVG DY +L+D + LTPN++DC+ + Sbjct: 119 ESQGMLCSAKELKLSDENSGLIDLPDDAPVGQNFRDYFQLNDLKFTIKLTPNKADCLSIL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-P 231 G+A ++ A LK+ + + L +K D LC F+ ++G+ A P Sbjct: 179 GVAREVSALTGCALKKPTYQPVAVTMADILPVKISAPD--LCGRFSGRIIRGLNAKAATP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+QRL+ G RSI+ALVDI+NYV L+ G P+HVFD S+I L VR GE + L+ Sbjct: 237 EWMKQRLERSGQRSIAALVDISNYVMLELGQPTHVFDLSKIHGGLDVRWGRVGEALKLLN 296 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + VIA + I+S+AGI+GG +T D+ +E A W P I + Sbjct: 297 GNTVTVDDWVGVIADEQEIESLAGIMGGDATAVTLDTQDIYLEAAFWFPQAIQGRARRYN 356 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRK--IVFM 407 T++ +RFERGVD + ++ I +LI+ +CG T + I P + + Sbjct: 357 FSTEAAHRFERGVDFATTVDSIERITALIVEICGQTGITMVGPIDDQTANLPSRLPVSLR 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S ++ G+ E I RLGF + +FEV+ PS+R D+E + DL+EEI R++ Sbjct: 417 TSRASKIIGVPFTDEQIAEIFSRLGFEFKQKSGEFEVTPPSFRFDMEIEEDLIEEIARVF 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G + I + P P+ + + ++ R+ + V+R +A R EV+N+SF+ + F G Sbjct: 477 GFENIPAVP-PVA--ANAIRVRPEEVRSLFTVRRQIAGRDYQEVINFSFVEESWEHDFAG 533 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 +++ NPI++ +S MR++L+ GL+ N++R + +FE VY D+ Sbjct: 534 NDAPIKLRNPIASQLSVMRSTLIGGLIANVRYNLNRKASRIRVFEFGTVYRRDS------ 587 Query: 587 MAAGIRKGS---SGIEGSGRL----WSDKSEER----CRFVDLFDAKADALSVIEPFVSL 635 G++ G+ +G + RL + ++E+ R +D FD KAD +++ P V+ Sbjct: 588 ---GVKDGALTVAGYSQTKRLAALAYGPAADEQWGLGARNIDYFDIKADIEALLAPAVA- 643 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 RF S HPGRS I + V G+ GE HP + + L P+ +D+ Sbjct: 644 ---RFVSIRHPALHPGRSATILVEGKDV-GFIGELHPRLQQSYEL--PLAPVLFEIDATV 697 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-------IDDVT 748 + + +++ S V RDLA +VDQ + L++ NV++ + + Sbjct: 698 LQSRSLPAFQEI---SKFPAVTRDLAVVVDQAVRVQDLIDTF-NVEKTQNIACKSMQAIV 753 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD ++G L G+KS+A + +Q + T +DD + M V +V KK A LR+ Sbjct: 754 LFDEYRGAGLSSGEKSLAFRFTLQDTQSTLQDDKVDAAMSAFVSSVNKKHGAKLRT 809 >gi|254523858|ref|ZP_05135913.1| phenylalanyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] gi|219721449|gb|EED39974.1| phenylalanyl-tRNA synthetase, beta subunit [Stenotrophomonas sp. SKA14] Length = 807 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 262/824 (31%), Positives = 428/824 (51%), Gaps = 48/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ T S +++ LT+IGLEVE+V E L + +++ R+P+ D Sbjct: 10 MKFSENWLRSHVPTSASRDELSAVLTAIGLEVEEVTALGEGLDHVVVARIVEAVRHPEAD 69 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ES GM+ Sbjct: 70 RLQVCRVDAGQGELLQIVCGAPNARPGLVAPLAMVGAQIGE--LKIKPAKLRGVESNGML 127 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +D++ ++ELP DAPVG L +YL L D I++ LTPNR+DC +RGIA D+ Sbjct: 128 CSAKELGLDNDASGLLELPDDAPVGQALVEYLGLPDASIEIKLTPNRADCFSLRGIAFDV 187 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA--PNWMRQ 236 AA ++ + + S L I+ LD + + ++GV N A P WM + Sbjct: 188 AAATRSEVLDFAADAIAAVGSRELSIQ--LDAGAEAPRYLGRVIEGV-NAAAKTPLWMAE 244 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+R +S LVDIT YV L+ G P H +D + + VRR+ + E + LD ++ Sbjct: 245 RLRRSGVRPVSLLVDITQYVMLELGQPMHAYDLGTLQGSIAVRRSRADETLKLLDGRDAA 304 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L +V+ R +AG++GG D TT V +E A + P I G+ LG+ TD+ Sbjct: 305 LDDSFLVVTDADRAVGLAGLMGGFDTRVTDATTAVFLEAAHFAPAAIMGRGRKLGLHTDA 364 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKRL 414 +RFERGVD +++ L+L L GG + + + +P I + + R+ Sbjct: 365 GHRFERGVDPALPRTAIEYATRLVLDLAGGIPAPVTEAVREADLPQPATIALRRARITRV 424 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI + + RIL LG V + ++V+ PS R D+ + DL+EE+ RI+G +QI Sbjct: 425 LGITIEDAEVERILRALGMDVSATAEGWQVAAPSRRFDIAIEEDLIEELARIHGYEQI-- 482 Query: 475 EPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--L 531 P L + + S Q V+R L +R E VN++F+ + ++L R+ + Sbjct: 483 -PTTLPGGASRVAMPSETQLDALSVRRQLIARDQQETVNFAFV--DDALLTQWQLRDGLV 539 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---DTPEGQK--- 585 + NP+SA+++ MR SLLPGL+ GRN R + +FE+ V+ D G++ Sbjct: 540 PLANPLSAELAVMRPSLLPGLVATLGRNAARQLGRVRLFELGRVFAQQAGDASPGERRPA 599 Query: 586 -----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +AA + + ++ W S R VD D K D S+ S L F Sbjct: 600 PLETPRVAAAVCGDAQAVQ-----WGLPS----RKVDFHDLKGDLESLAA--ASGAQLEF 648 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A ++ HP RS + + +G+ G+ HP + + + FE LD P++ ++ Sbjct: 649 RPSARAYGHPVRSAEVLRDG-VAIGWIGQIHPRLAKAMEIEADVYAFE--LDLEPLTARR 705 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 + + LS V+RDLAF+V + + L ++ L+ D+ +FD + G+ + Sbjct: 706 LPRAGE---LSRYPAVRRDLAFLVPEQVAWADLAATVRQAAGPLLRDLNLFDRYVGQGVE 762 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A+ +++Q T D D+ ++ V + ++ +A +R Sbjct: 763 PGFKSLAMGLILQDKSRTLTDRDVDAVVAEAVTAIEREHHARIR 806 >gi|304397621|ref|ZP_07379498.1| phenylalanyl-tRNA synthetase, beta subunit [Pantoea sp. aB] gi|304354793|gb|EFM19163.1| phenylalanyl-tRNA synthetase, beta subunit [Pantoea sp. aB] Length = 795 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 266/822 (32%), Positives = 433/822 (52%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPALDSAALSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIRTYLQLDDNTIEISVTPNRADCLGLIGIARDV 179 Query: 179 VAAG---LGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA---PN 232 L K + ++ L+ E+ P+++ D + C + VKG+ NVA P Sbjct: 180 AVLNGLPLNKPQMQPVTATLN-ETFPIQV----DATEACPRYLGRVVKGI--NVAAATPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L+ G P H FD RI + VR A GEK+ LD Sbjct: 233 WMKEKLRRCGIRSIDPVVDITNYVLLELGQPMHAFDLERIDGGIVVRMAKEGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L D +VIA + ++AGI GG+H+G + T ++L E A +DP++I + G+ Sbjct: 293 TEASLQSDTLVIADHQKALAMAGIFGGEHSGVNGETQNILFECAYFDPLSITGRARRHGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSE 410 TD+ +R+ERGVD L+ L+LS+CGG A + + T P I + Sbjct: 353 HTDASHRYERGVDPALQHTALERATELLLSICGGEAGPVIDQTHQTALPVPATITLRREK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + + IL RLG V +++ PSWR D+ + DLVEE+ RIYG + Sbjct: 413 LDRLIGHVIADDQVTDILTRLGCEVTVGEGQWQAVAPSWRFDMAIEEDLVEEVARIYGYN 472 Query: 471 QIKSEP----LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 I P L +TQ + NLSL+++ K +L + E + +SF+ + L Sbjct: 473 NIPDVPVQAGLVMTQHREA-NLSLKRA-----KNMLVDKGYQEAITYSFVDPKIQQLLHP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G+ L + +PIS+DMS MR SL GLL A N +R + +FE + P+ Q Sbjct: 527 GEEALLLPSPISSDMSTMRLSLWTGLLSAVVYNQNRQQSRVRLFESGLRF---VPDSQAD 583 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFES 642 + GIR+ + +G + ++ EE + VD +D K D S+++ LD++ F + Sbjct: 584 L--GIRQ---DLMLAGVISGNRVEEHWDLARQTVDFYDLKGDLESLLDLTGKLDNISFRA 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPG+S I E + G+ G HP + L+ FE+ + ++ + Sbjct: 639 EVNPALHPGQSAAIYLHDEHI-GFIGVVHPELERKLDLNGRTLVFELLWNK--VADRVLP 695 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEG 761 +++ S +RD+A +V +++PA ++ K + V +FDV++GK + EG Sbjct: 696 DAREI---SRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVSEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI +++Q T +++I + + V + ++ A LR Sbjct: 753 YKSLAISLILQDTSRTLEEEEIAATVGKCVAALKERFQATLR 794 >gi|209516670|ref|ZP_03265523.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] gi|209502945|gb|EEA02948.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia sp. H160] Length = 811 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 271/845 (32%), Positives = 429/845 (50%), Gaps = 77/845 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVE--DLRPAAPPTSKIVVGQVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGS--CIPENNMIVNVRK 108 D + ++D G + +VCGAPNV V L+G PP P + + K Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAEEGAAP---FAIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+CS +EL LS+D + +M LP D P+G + + L L D + ++ LTPN++DC Sbjct: 116 LRGVESQGMLCSARELKLSEDHSGLMILPEDTPIGQDIRETLNLDDTVFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + V G+A + A L+ + I L + L +K D LC F+ ++GV Sbjct: 176 LSVFGVARETSAITGAPLRPLEIKPALVKLNETLPVKISAPD--LCGRFSGRVIRGVNAR 233 Query: 229 V-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR GE + Sbjct: 234 AKSPQWMVERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGMDVRWGRKGETL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +L VIA + I+S+AGI+GG +TT++ +E A W P +I Sbjct: 294 KLLNGNTVELDETVGVIADEQHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IV 405 + TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 354 RKYNFSTDAGHRFERGVDYATTVDHIERITQLILDICGGEAGP--VDDQIVNVPKRAPVK 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S R+ G+ + ++ +I RLG S + D F V PS+R D+E + DL+EE+ R Sbjct: 412 MRVSRANRIIGVAISGDEIAQIFTRLGLSFERDGDTFSVIPPSYRFDIEIEEDLIEEVAR 471 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F Sbjct: 472 IYGFEKIPARP-PVATSEMRATNETQRS-IHAIRHALAARDYAETVNFSFVDAEWEQDFA 529 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYENDTPEGQ 584 G + ++NPI++ +S MRT+L L++ N++R AD +FE V+ +D Sbjct: 530 GNSNPVRLINPIASQLSVMRTTLFGSLIQVLRTNLNRRAADRVRVFEAGRVFLHDP---- 585 Query: 585 KYMAAGIRKGSSGIEGSGR-------LWSDKSEER----CRFVDLFDAKADALSVIEPFV 633 I+ G +EG + + + EE+ R VD FD K D +++ P V Sbjct: 586 -----SIKAGELTVEGFAQPKMIGALAYGPELEEQWGAAARAVDFFDVKGDLEALVAPAV 640 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + F HPGR I+ + V G+ GE HP + + L + FE+ ++ Sbjct: 641 A----HFVKAEHPALHPGRCARIELNGRAV-GWIGELHPRWMQKYDLPHAPILFEIEAEA 695 Query: 694 -----IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-----RL 743 +PI + +S PV+RD+A +VDQ I L++ ++ + Sbjct: 696 LMQRVLPIPSE----------VSKFPPVRRDIAVVVDQKIEVQALLDELQKAQSEPACKA 745 Query: 744 IDDVTVFDVFQGKS-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + V +FD F+ KS L +KS+A +V +Q T +D+ + + + +VE + + Sbjct: 746 VQKVALFDEFRPKSNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTLVERLARVY 805 Query: 799 NAVLR 803 A LR Sbjct: 806 GARLR 810 >gi|43071|emb|CAA23565.1| unnamed protein product [Escherichia coli] Length = 795 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 258/816 (31%), Positives = 423/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVTTIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP D +G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADVRIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A L +L N +I + ++ C + VKG+ P WM+++ Sbjct: 180 --AVLNQLAAGNPEIVPVGATIDDTLPITVEAPEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQRSLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT P G Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L+ + F + A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + Sbjct: 645 HPGQSAAIYLKGERI-GFVGVVHPELERKLDLNGRTLVFELEWNKL-----ADRVVPQAG 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|285017869|ref|YP_003375580.1| phenylalanyl-tRNA synthetase beta chain protein [Xanthomonas albilineans GPE PC73] gi|283473087|emb|CBA15592.1| putative phenylalanyl-trna synthetase beta chain protein [Xanthomonas albilineans] Length = 792 Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust. Identities = 258/817 (31%), Positives = 423/817 (51%), Gaps = 40/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ T + E++ TLT+IGLEVE+V EAL + ++++ +P+ D Sbjct: 1 MKFSENWLRSHVPTQATREQLAATLTAIGLEVEEVVPLGEALQQVVVARIVATSPHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ +Q+VCGAPN R GL+ A G+ + + + +RGI S GM+ Sbjct: 61 RLQVCRVDAGQGDALQIVCGAPNARPGLVAPLALVGAQV--GGIAIKPATLRGIASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L +D++ + ELP DAPVG L+DYL L D I++ LTPNR+DC GVRGIA D+ Sbjct: 119 CSAKELGLDNDASGLFELPDDAPVGQPLADYLGLPDASIEIKLTPNRADCFGVRGIAYDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 AA ++ + ++ P++ S+ ++ LD + + V+ + + P WM +R Sbjct: 179 AAACGSEVLPLALA-PVAQASV-RALEVCLDAGAAAPRYCGRVVEDLDSTAKTPLWMAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R +S LVDIT YV L+ G P H FD + + VR A +GE + LD +E L Sbjct: 237 LRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPIGVRHARAGETLPLLDGREATL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P +V+ R ++AG++GG + T V +E A + P I G+ LG+ TD+ Sbjct: 297 DPSFLVVTDADRAVALAGLMGGHATRVTETTRHVFLEAAHFAPAAIMGRGRKLGLHTDAG 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLS 415 +RFERGVD L+ L+L L GG A + + P I + + R+ Sbjct: 357 HRFERGVDPGLPRQALELATRLVLELAGGRAGPVVEVERSEFLPTPAPITLRRARIFRVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI++ + RIL+ LG V+ ++V+ PS R D+ + DL+EE+ RI+G D+ Sbjct: 417 GIEIADAEVQRILQALGMEVMASAHGWQVTAPSRRFDIALEEDLIEELARIHGYDR---- 472 Query: 476 PLPLTQVEDKRNLSLQQSRT---RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 LP T +++ R V+ L +R ++E +N++F+ +G + Sbjct: 473 -LPTTLPSGAARIAMGSETCVDERSVRAQLVARDLLETINYAFVDATLLDQWGLRDGRVA 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYM 587 + NP+S +++ MR SLLPG++ A GRNV R +FE+ V+ T P + + Sbjct: 532 LANPLSTELAVMRPSLLPGVVAALGRNVARQAGRVRLFEMGKVFAVATSVDAAPGETQRV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W + R VD D K D ++ S L + A + Sbjct: 592 AAAVCGDADALQ-----WGLPA----RKVDFHDLKGDLEALAA--ASGALLEYRPSALPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HP RS + + G+ G+ HP +L + + GFE LD P+ + + Sbjct: 641 AHPTRSADVYRDGTRI-GWIGQLHPRLLQAMQVDVEVIGFE--LDLAPLVAR---PLPRA 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLA +V + + + ++ V L+ +V +FD + G + G KS+A Sbjct: 695 AELSRFPSVRRDLAIVVPEAVRWMAVAQSVRAAVGPLLREVVLFDRYVGPGVEVGCKSLA 754 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +++Q T D D+ ++ +V + ++ +A LR Sbjct: 755 MGLILQDNSRTLTDRDVEAVVADVVAALAREHDARLR 791 >gi|269468322|gb|EEZ79998.1| phenylalanyl-tRNA synthetase beta subunit [uncultured SUP05 cluster bacterium] Length = 787 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 248/812 (30%), Positives = 430/812 (52%), Gaps = 34/812 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + SWL++ ++ +V+ E + + LT GLEV+ +++ A + V+S E++PD D Sbjct: 1 MNISTSWLREWINPNVTDEMLAEQLTMAGLEVDGIESVAPAFDNVVVGHVVSCEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ +Q++CGA NVR L + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNLCQVDIGESDNLQIICGASNVRADLKVIVATVGAKLP-GGLKIKKAKLRGVESFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL +SD S I EL DAP+G + +YL+L D II++ +TPNR DC V G+A + Sbjct: 120 CSESELGMSDSSEGISELDSDAPIGQDIREYLDLDDNIIELDITPNRGDCFSVLGVARE- 178 Query: 179 VAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 V+A K E+ S I + ++ C + +K + N + P WM Sbjct: 179 VSANYNKAFEMPKFEVDAQGAS---SISTSVSNAQACPKYLTRVIKDIDNTIKTPKWMAD 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L G + S +VDITNYV L+ G P H FD S+I+ + VR A +GE I L+ + Sbjct: 236 KLTRSGQQVHSPVVDITNYVLLELGQPMHAFDFSKINGAIEVRNAKAGEVIELLNETTVE 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ D ++IA D +IAG++GG + D++T +L+E A ++P++IA +N G+ T+S Sbjct: 296 LNNDTLIIADDSVPLAIAGVMGGMGSSTQDDSTQILLESAFFEPVSIAGKARNYGLHTES 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKRL 414 RFERGVD + LI+ +CGG AS+I C+ + + I +++++ Sbjct: 356 SLRFERGVDFNITEVAMDRATQLIVDICGGEASNINTCVDESALPELAPITITQEKIQKI 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++ L F + + D + + PS+R D+ ADL+EE+ R+YG D++ Sbjct: 416 LGFELEANWIEEKFTNLDFEISSKTDHSWTIIPPSFRFDIRIPADLIEELARLYGYDKLP 475 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + L L + N + +Y + + L SR EV+ +SF+S++ L +++ Sbjct: 476 VQKLSL---DANINAVSESMVDKYDIAQGLVSRGYQEVITYSFVSEQYQDLIDPDAKKIT 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPISADMS MR+SL GLL+ N R A+ FE+ + + Q AG+ Sbjct: 533 LSNPISADMSTMRSSLWAGLLQTVESNQRRGHANARFFEIGLCFNGVKADEQSQKIAGVI 592 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G+ + WS +++ +D +D K+D S++ ++ + F++ G+ Sbjct: 593 TGNRHDDQ----WSSEAQA----LDFYDIKSDVESLL--LLTTNVFTFKAAEHPALQKGQ 642 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + I + + V G+ G P++ LS + YL + ++ +++ K S Sbjct: 643 TAQILFNDQSV-GWVGTLAPHVQKQLSLS------KCYLFELDLASIQQSHVAKYQAFSV 695 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 RD+A +VD+ IP L++ I+++++ + DV +FDV+ G+++ +GKKSVA+ + Sbjct: 696 YQKATRDIALVVDETIPVNDLIDSIQDLNQAYLVDVHLFDVYVGENIEQGKKSVALNLSY 755 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 Q +++T DD + + ++ + K AV R Sbjct: 756 QSVEETLSDDQVNTQVSEVLALMQSKFFAVQR 787 >gi|197284917|ref|YP_002150789.1| phenylalanyl-tRNA synthetase subunit beta [Proteus mirabilis HI4320] gi|194682404|emb|CAR42263.1| phenylalanyl-tRNA synthetase beta chain [Proteus mirabilis HI4320] Length = 795 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 269/816 (32%), Positives = 424/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E++ + LT GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEELSEQLTMAGLEVDGVEPVAGDFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GNFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S++ I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISENHEGIIELPADAPIGTDIREYLKLNDNAIEISITPNRADCLGIMGVARDI 179 Query: 179 VAAG--LGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 +L +++ SS + P+ ++ L + F VK P WM+ Sbjct: 180 AVINKMTCQLPDMSPIAATSSATFPVRVEAPQACPRYLGRVFTNVNVKAN----TPLWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN+V L+ G P H FD + + VR GEK+ LD E Sbjct: 236 EKLRRGGIRSIDPIVDITNFVLLEMGQPLHAFDLDHVDGAVVVRMGKEGEKLTLLDGNEI 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + + +AGI GG+ +G ++ T +V +E A + P+ I + G+ TD Sbjct: 296 TLKDDVLVIADEKQALGMAGIFGGESSGVNEETKNVFLECAFFSPLAITGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD + ++ L+L +CGG +I N +Y P I +++ R Sbjct: 356 ASHRFERGVDSELQYQAIERATKLLLEICGGEVGEIIDVTNDSYLPHVAPIKLTRAKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + E + L RLGF V E D + +VPSWR DVE + DL+EE+ RIYG + I Sbjct: 416 LLGHVIDDEQVVDSLTRLGFGVTVENDGWLATVPSWRFDVEIEEDLIEEVARIYGYNNIP 475 Query: 474 SEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 PL + D R L R VK +L E + +SF+ + L + L Sbjct: 476 DVPLRADLIMTDHREADLPLKR---VKTMLVDNGFQEAITYSFVDPKIQSLLHPNEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMA 588 + NPISADMS MR SLL GLL N +R A +FE + V +N G Q+ M Sbjct: 533 LPNPISADMSAMRLSLLTGLLTTVVYNQNRQQARVRLFEAGLRFVPDNQAEYGIRQELML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ + + VD FD K + S++E LD + F+ S Sbjct: 593 AGVIAGNRYEEH----WTLEKQT----VDFFDLKGNIESILELTGQLDEITFKPANHSAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G G HP + L+ FE+ D+ I+ + + K V Sbjct: 645 HPGQSAEIYLRNEYI-GCIGVVHPELERKLDLNGRTVVFEIRWDA--IANRNLPQAKAVS 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V + A ++ K V I + +FDV+ GK + EG KS+AI Sbjct: 702 RFPS---NRRDIAVVVPNDVAAEDILAECKKVGGNQIVGINLFDVYCGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q ++ T +D+I ++ V + ++ A LR Sbjct: 759 SLILQDIEHTLEEDEIAATVNTCVAALKQRFQASLR 794 >gi|170768911|ref|ZP_02903364.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia albertii TW07627] gi|170122459|gb|EDS91390.1| phenylalanyl-tRNA synthetase, beta-subunit [Escherichia albertii TW07627] Length = 795 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 257/816 (31%), Positives = 423/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGASNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHNGIIELPADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L E I P+ + +I + ++ C + VKG+ P WM+++ Sbjct: 180 AVLNQLPLVEPEI-VPVGA-TIDDTLPITVEAQEACPRYLGRVVKGINVKAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RS+ A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSVDAVVDVTNYVLLELGQPMHAFDKDRIEGGIVVRMAKEGEMLVLLDGTEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++ GI GG+H+G +D T +VL+E A + P++I + G+ TD+ Sbjct: 298 NADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + N P++ I S++ RL Sbjct: 358 HRYERGVDPALQHKAMERATRLLIDICGGEAGPVIDITNEAMLPKRATITLRRSKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V D+++ PSWR D+E + DLVEE+ R+YG + I E Sbjct: 418 GHHIADEQVTDILRRLGCEVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDE 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + + +LSL++ VK +L + EV+ +SF+ + + G L Sbjct: 478 PVQASLIMGTHREADLSLKR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALL 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMA 588 + +PIS +MS MR SL GLL N +R IFE + DT Q M Sbjct: 533 LPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIFESGLRFVPDTQAQLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ E VD +D K D SV++ L + F A Sbjct: 593 AGVICGNRYEEH----WNLAKET----VDFYDLKGDLESVLDLTGKLADVEFRVEANPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G+ G HP + L+ FE+ + + + + Sbjct: 645 HPGQSAAIYLKGERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR----- 698 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI Sbjct: 699 EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 759 SLILQDTSRTLEEEEIAATVAKCVEALKERFQASLR 794 >gi|167836847|ref|ZP_02463730.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia thailandensis MSMB43] Length = 810 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 263/828 (31%), Positives = 427/828 (51%), Gaps = 44/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP D PVG + D L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLS--SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L +I L+ +E++P+ I LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLVAPDIRPVLAELTETLPVRISA----PDLCGRFSGRVIRGVNARA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 AP WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KAPRWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VI+ D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 QYNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGPVD-DQVVNLPQRAAVTMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RI+ Sbjct: 414 VSRANRIIGVEIGEDEVAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIH 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVAKSEMRATDETRRS-IHAIRHALAARDYAETVNFSFVDAEWERDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DNPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRADRVRVFETGRVFIADPAVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 AVEGYAQPKRVGALAYGPAVDEQWAAATRQVDYFDVKGDLEALLAPVVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 648 PALHPGRSAQIEVDGRAV-GWIGELHPRLMQQYELPHAPVMFEIDADAL-VARALPAPSE 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 762 GGLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|227111540|ref|ZP_03825196.1| phenylalanyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 795 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 264/824 (32%), Positives = 429/824 (52%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ V E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVDSETLSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVAMVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGTDIREYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E I P+++ ++ P+++ D C + VKG+ A P WM Sbjct: 180 AVLNQLALNEPTIE-PVAATIQDTFPIQV----DAPQACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD R++ + VR A GE + LD E Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLNGGIIVRMATEGETLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA ++ GI GG+H+G ++ T +VL+E A ++P++I + G+ T Sbjct: 295 AKLNADTLVIADQQSALAMGGIFGGEHSGVNEETQNVLLECAYFNPLSITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFM 407 D+ +R+ERGVD P L+H L++ +CGG A + + P + I Sbjct: 355 DASHRYERGVD-----PALQHKAIERATRLLIDICGGEAGPVVDVTSEADLPTRATITLR 409 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++ RL G + E IL+RLG +V ++ + PSWR D+E + DLVEE+ RIY Sbjct: 410 REKLDRLIGHVIADEQVSDILQRLGCNVAKTDAGWQATAPSWRFDMEIEEDLVEEVARIY 469 Query: 468 GVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G + I + P PL + R SL R VK +L E + +SF+ + L Sbjct: 470 GYNNIPNIPTQAPLI-MTSHREASLSLKR---VKTLLVDHGFQEAITYSFVDPKIQGLIH 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 + L + +PISA+MS MR SL GLL A N +R + +FE + DT Sbjct: 526 PNEASLSLPSPISAEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFVPDTSADLG 585 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q M AG+ G+ + + + + VD +D K D +V+ L + F+ Sbjct: 586 IRQDLMLAGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSEVEFK 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPG+S I E + G+ G HP + L+ FE+ D ++ + Sbjct: 638 AENNPALHPGQSAAIYLCGERI-GFIGVIHPELERKLDLNGRTVVFELLWDK--VADRVL 694 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 + +V S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + Sbjct: 695 PEANEV---SRFPANRRDIAVVVAENVPAGDILAECKKVGANQLV-GVNLFDVYRGKGVA 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+AI + +Q T +++I + V + ++ A LR Sbjct: 751 EGYKSLAISLTLQDTTRTLAEEEIAATVAECVAALKQRFQASLR 794 >gi|325528722|gb|EGD05792.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia sp. TJI49] Length = 809 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 270/828 (32%), Positives = 422/828 (50%), Gaps = 45/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESHGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDETLPVRIA----APDLCGRFSGRVIRGVNARA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + +++ R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQSVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIASIFTRLGLPFERDDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEQDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ N + + + Sbjct: 532 DTPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFETGRVFLANPSAKAGEL 591 Query: 587 MAAGIRKGSS-GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 G + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 TVEGYAQPKRVGALAYGPALDEQWGAATRAVDFFDVKGDIEALLAPAVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T+ Sbjct: 648 PALHPGRSARIELDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARTLPAPTE 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + IK + R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEIKKALAEDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +VE + +T A LR Sbjct: 762 GGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMA-RTGARLR 808 >gi|39996620|ref|NP_952571.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter sulfurreducens PCA] gi|66773924|sp|Q74CZ9|SYFB_GEOSL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|39983501|gb|AAR34894.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens PCA] gi|298505633|gb|ADI84356.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sulfurreducens KN400] Length = 801 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 267/824 (32%), Positives = 441/824 (53%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE---ALSPFTIVKVLSVERNPD 57 M T +WLK+ ++ D+S +++ D LT +GLEVE V RE L + V ++P+ Sbjct: 1 MIVTYNWLKEFVECDLSTQELGDLLTMLGLEVEGV--REVGGGLDQVVVAVVEERRKHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D ++ +++ G+ + + +VCGA N G A G+ +P + + KIRG ES G Sbjct: 59 ADKLSLCKVNNGR-EILDIVCGAQNFTAGDKVALAQIGAVLP-GDFKIKRSKIRGEESCG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CSE+EL LS +S IM LP D P+G L D L L D I ++ LTPNR+DC+ V G+A Sbjct: 117 MLCSERELGLSAESEGIMILPSDLPLGVPLFDALGLKDTIFEIGLTPNRADCLSVIGVAR 176 Query: 177 DLVAAGLGKLKEINISCP-----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 + +AA LGK I+ P S E + + ++D LC + + G +P Sbjct: 177 E-IAAKLGK----RITYPGHAVVESGEPVTQKATVIVEDPELCPRYTARFISGCSIGPSP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W+ +RL+AVG+RSI+ +VD+TNYV ++ G+P H FDA + + + VRRA GE L Sbjct: 232 AWLVRRLEAVGMRSINNVVDVTNYVLMEYGHPLHAFDADLLENSTIVVRRATDGEVFTTL 291 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D Q+ L+ ++ I R ++AGI+GG+++ D TT++L+E A ++P I R+ K L Sbjct: 292 DGQQRTLTAGDLTIRDGARSVALAGIMGGENSEIRDTTTNILLESAYFNPSAIRRTAKRL 351 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNS 409 G+ T+S +RFERG D+ + L +L+ L GGT A+ I R I F Sbjct: 352 GLHTESSHRFERGADVAIVTRALDRAAALLAELAGGTVAAGIIDVYPTPVSHRTIRFRVD 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 L G+++ + + L F+ + E +V+VP++R D+E + DLVEE+ R+ G Sbjct: 412 RCNALLGVELSANEMKALFHHLEFTTVTVEPGIIDVTVPTFRVDLEREIDLVEEVARLNG 471 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFG- 525 D+I++ +P +V R + Q R + ++ + EV+ +SF++ ++ G Sbjct: 472 YDRIETT-MPRARVFSDRP-TKHQRMERRCRDLMVGQGFNEVITFSFMAPGALDRMMLGP 529 Query: 526 -GGQRELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 G+R + L NP+ + + MRT+LLPGLL+A RN++ D +FE+ VY E + Sbjct: 530 EDGRRSVVALRNPLVDEQAVMRTTLLPGLLEAASRNLNYRSLDLRLFELRRVYLRVEGEQ 589 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + + AG+ G EG W+ + +D +D K +V++ F + Sbjct: 590 LPNEPLVLAGLMTGRRYPEG----WNQEKHP----LDFYDVKGVVEAVLDAFSVSGASYS 641 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +YHPG+S +K +++LG GE HP++ D FG+ P+ FE+ + + + + Sbjct: 642 SDDTDVFYHPGKSCTVK-CGDLILGSLGELHPDVQDNFGIDQPVFYFELNFERLLSAARA 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLG 759 + S RD+A +V PA +V I + R I+ VFD+++G + Sbjct: 701 ASAVVPP---SRFPDTFRDIAILVADETPAADIVRCIDGLRIREIESAAVFDLYKGVHVP 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKS+A++V + + T DD++ L ++V+++V K A +R Sbjct: 758 EGKKSIAVRVRYRSTEKTLSDDEVSPLHQKVVDSLVAKLGATIR 801 >gi|56708092|ref|YP_169988.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. tularensis SCHU S4] gi|110670563|ref|YP_667120.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. tularensis FSC198] gi|224457184|ref|ZP_03665657.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. tularensis MA00-2987] gi|254370577|ref|ZP_04986582.1| phenylalanyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254874894|ref|ZP_05247604.1| phenylalanyl-tRNA synthetase beta chain [Francisella tularensis subsp. tularensis MA00-2987] gi|66773852|sp|Q5NG54|SYFB_FRATT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56604584|emb|CAG45635.1| Phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis SCHU S4] gi|110320896|emb|CAL09018.1| Phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis FSC198] gi|151568820|gb|EDN34474.1| phenylalanyl-tRNA synthetase [Francisella tularensis subsp. tularensis FSC033] gi|254840893|gb|EET19329.1| phenylalanyl-tRNA synthetase beta chain [Francisella tularensis subsp. tularensis MA00-2987] gi|282159293|gb|ADA78684.1| Phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis NE061598] Length = 790 Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust. Identities = 272/813 (33%), Positives = 424/813 (52%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKALNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|292493202|ref|YP_003528641.1| phenylalanyl-tRNA synthetase subunit beta [Nitrosococcus halophilus Nc4] gi|291581797|gb|ADE16254.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosococcus halophilus Nc4] Length = 792 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 257/816 (31%), Positives = 420/816 (51%), Gaps = 38/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 MKF+ +WL+ ++ D+S E + + LT GLEV+ V++ A PF + KVLSVE +P Sbjct: 1 MKFSEAWLRQWVNPDLSTEALVERLTLAGLEVDSVES--AAPPFDGVRVAKVLSVEPHPK 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + VVCGAPNVR GLL A G+ +P I K++G+ES G Sbjct: 59 ADRLQVCQVDVGDGSPLTVVCGAPNVREGLLAPLAMVGARLPAGAKIERA-KLQGVESFG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL L++ S ++EL +A G L ++L+L D I++ LTPNRSDC+ V GIA Sbjct: 118 MLCSAAELELAEQSVGLLELSEEASPGDDLHEFLQLDDVSIEIDLTPNRSDCLSVAGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL----CKGFAMCCVKGVRNNV-AP 231 ++ G L + ++ P E +P +I+ + + C + ++GV P Sbjct: 178 EV-----GVLTQSAVTKP-DLEPVPAKIEDTFPITVMAPEACPRYLGRVLRGVNPQAQTP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+R+RL+ G+RS+ +VDITNYV L+ G P H FD ++ + VR GE + LD Sbjct: 232 WWLRERLRRSGIRSLGLVVDITNYVMLELGQPMHAFDLEQLEGGIQVRYGRPGESLTLLD 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 L+ + +VIA R ++AGI+GG+ +G D T + +E A ++P IA + G Sbjct: 292 GTHLQLAAETLVIADQQRALALAGIMGGEESGISDQTQHLFLESAFFNPTVIAGRARLYG 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKPR-KIVFMNS 409 + TDS +RFERGVD + ++ +L++ + GG A I + + PR I+ + Sbjct: 352 LHTDSSHRFERGVDPELPRRAMERATALLIEIAGGQAGPIIEVVDSSQLPPRPTIILREA 411 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++R+ G+++ L RLG V + + VPS+R D+ + DL+EE+ R++G Sbjct: 412 RIRRVLGVEIAESQITEQLTRLGLEVERIAEGWRAKVPSFRFDLALEIDLIEELGRLHGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D + S P+ Q+ S +R ++ VL R E + +SF+ + Sbjct: 472 DGLPST-RPVGQIRPMLKTEAGVSVSR-IREVLVDRGYQEAITYSFVDPKLQQWLDPEGT 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMA 588 + + NPIS DM+ MRT+L GL++A NV R +FE + T Q+ Sbjct: 530 PVALNNPISTDMAVMRTTLWSGLIQALRYNVHRQQERIRLFEYGLTFNGQLTYLKQERTI 589 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ SG + ++ R VD FD K D +++ D F + Sbjct: 590 AGLV--------SGACYPEQWGVAARPVDFFDLKGDVEALLGLGGQRDCFEFVAEQHPAL 641 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I V G+ G HP + L G VYL ++ + + Sbjct: 642 HPGQSARIVREGRPV-GWVGALHPALEGKLDL-----GGHVYLFALQVEAVECGGLPAFQ 695 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 LS ++RD+AF+V ++IPA + + +K ++ ++ + +FDV+ GK + KKS+A+ Sbjct: 696 SLSKFPAIRRDIAFLVSKNIPAQAVFDCLKGLESDILKEFQLFDVYTGKGVDPDKKSLAL 755 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++++Q T DD + M+R+V + + A++R Sbjct: 756 RLILQHPSYTLTDDKVNAFMERVVTGLTTELGAIIR 791 >gi|237653681|ref|YP_002889995.1| phenylalanyl-tRNA synthetase subunit beta [Thauera sp. MZ1T] gi|237624928|gb|ACR01618.1| phenylalanyl-tRNA synthetase, beta subunit [Thauera sp. MZ1T] Length = 796 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 254/814 (31%), Positives = 423/814 (51%), Gaps = 29/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F+ WL+ +D + + LT GLEVE+ + A + K++ E++P+ D Sbjct: 1 MQFSEQWLRTFVDPQLDSAGLGHLLTMAGLEVEEAEPAAPAFRGVVVAKIVEAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN G+ A G+ +P + K+RG+ES GM+ Sbjct: 61 KLKLCKVDAGTGELLQIVCGAPNAAAGMKVPCAVVGAVLP-GEFEIKKAKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL S+D + + LP DAPVG + YL L D + + LTPNR+DC+ + G+A ++ Sbjct: 120 CSARELGFSEDHSGLYALPEDAPVGTDIRAYLGLDDTLFTIKLTPNRADCLSLTGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFD--LDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 A G+ + + I P++ +E + D LD C + ++GV A P+WM Sbjct: 180 AAITGGEFRPLAID-PVAPA---IEARRDIVLDAPQACPRYCGRILRGVDARAATPDWMV 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL G+RSISALVDITNYV L+ G P H FD +++ + VR +GE++L L+ Q Sbjct: 236 RRLVRSGIRSISALVDITNYVMLELGQPLHAFDNAKLQGAIHVRLPRAGEQVLLLNEQTV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 + D ++IA + R ++AGI+GG+ +G +TT+V +E A + P IA + G +D Sbjct: 296 TPAADTLLIADEARALALAGIMGGEDSGITLDTTEVFLESAFFAPDAIAGRARAYGFGSD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 + +RFERGVD + L+ L++ LCGG A + A P + + + +R Sbjct: 356 ASHRFERGVDPELARGALERATRLVIELCGGEAGPVVEAVATDALPARAPVRLRPARARR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D L +L R+ V D V+ PSWR D+E + DL+EEI R++G D I Sbjct: 416 VLGIVLADADMLALLRRVHLQVERTGDDILVTPPSWRFDIEIEEDLIEEIARLHGYDNI- 474 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P Q S + R + ++ +LA+R EVVN++F+ + F + + Sbjct: 475 --PAIAPQGSLMMLPSSENGRPVWALRHLLAARGYQEVVNFAFVEEAWERDFCANENPIR 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NPI++ +S MR+SL+PGL+ N R I +FEV+ V+E +G Sbjct: 533 LANPIASHLSVMRSSLIPGLVGTLAANRKRQIDRVRVFEVARVFERKA-DGDPVRGFHQV 591 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 + + +G++ ++ ER R VD +D K D +E + L+F + HPGR Sbjct: 592 MNIAAL-AAGQVVPEQWGERARSVDFYDVKGD----LEALFAPRELQFAPLSHPALHPGR 646 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + ++ ++ G GE HP + + L FEV LD+ + +S Sbjct: 647 AAAVRLDGHMI-GVLGELHPVWVQRYELGTAPVVFEVALDA-----ALAARVPAYAEISR 700 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 + V+RDLA +V +P ++ +++ L+ ++ +FD++QGK + KKS+A +V + Sbjct: 701 MQAVRRDLALVVGNEVPVERVLEVLREAAPALVREIALFDLYQGKGIDHDKKSLAFKVSM 760 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 Q + T D ++ + +V + A LR + Sbjct: 761 QDTRRTLEDAEVDAAIALLVTHAETVLGARLRGA 794 >gi|319943682|ref|ZP_08017963.1| phenylalanyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] gi|319742915|gb|EFV95321.1| phenylalanyl-tRNA synthetase beta subunit [Lautropia mirabilis ATCC 51599] Length = 816 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 263/837 (31%), Positives = 431/837 (51%), Gaps = 54/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ WL+ + + V + LT G+EVE + A S + +++S ++PD D Sbjct: 1 MRIPEKWLRHYCNPPVDGAALEHLLTMGGMEVESREPVAAAFSGVVVARIVSAAKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A PG+ +P + + K+RG ES GM+ Sbjct: 61 RLQVCMVDVGQAEPVQIVCGAPNARAGLVTACALPGAVLP-GDFRIKKTKMRGQESGGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL + DD I+EL D G L L+L + ++++ LTPN + C+ V G+A DL Sbjct: 120 CSGRELGMGDDHGGILELSADLKPGTDLRQALDLDEDVLELKLTPNLAHCMSVLGVARDL 179 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 A ++E + ++S+++ + +++ +LC FA ++GV + + P+WM+Q Sbjct: 180 GALANHPVQEPAFAPVAVTSDAV---LPVRIEEPALCGRFAGRVIRGVNASASTPDWMKQ 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL G R ISALVDI+NYV L+ G P+H+FD +R+ L VR +GEK+ L++Q Sbjct: 237 RLARAGQRPISALVDISNYVLLELGRPTHIFDLARLKGGLHVRWGRAGEKLALLNDQTVT 296 Query: 297 LSPD------NVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVALWDPINIARSGKN 349 + PD VV DG + S+AGI+GG+ + D + TTDV +E A W P I + Sbjct: 297 VEPDAQGLPVGVVCDDDGPV-SLAGIMGGQGSAVDAEKTTDVYLEAAFWWPSAIMGRPRR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMN 408 TD+ RFERGVD + ++ L+++ L+L +CGG A ++ +T P RK V M Sbjct: 356 YNFTTDAAQRFERGVDAETVVEHLEYLSRLVLEICGGQAGP--VSDEVTGLPERKPVAMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGF--------SVIGEYDK-FEVSVPSWRQDVEEKAD 458 S + R+SG+ + +D RLGF + G D F+V+ PS R D+ + D Sbjct: 414 LSRLARVSGLSLSADDCADAFRRLGFVFEQKTVDAGNGASDTVFQVTPPSRRFDIAIEED 473 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L+EE++R++G + I + P P ++ R + T +KR A+R EV+N+SF+ Sbjct: 474 LIEEVIRLHGYEHIPTRP-PQARIA-MRPAPEARLGTLALKRRWAARDYQEVINFSFVDS 531 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 F + + NPI+ + MRTSL GLL N++R +FEV VY Sbjct: 532 ADDRRFRPAGDAIRVQNPIAEHLDVMRTSLWSGLLANLRHNLNRKAERVRLFEVGRVYWP 591 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 P G +A + G+ G + R VD +D K D L P Sbjct: 592 APGQPAGPLALADIAQPVQLGVLVHGSALDPQWGAATRSVDFYDLKGD-LEAAHPEA--- 647 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-- 694 +L+F + + HPG+S I+ +G+ G HP ++D L P+ E+ ++ Sbjct: 648 NLQFVAASHPGLHPGQSARIQLPDGTPVGWIGALHPQLIDELDLPGPVFLAELDWSAVQT 707 Query: 695 -PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDV 747 P++ +R S P RDLA ++D+ +PA ++ I+ V R + V Sbjct: 708 RPVASYQRD--------SRFPPAIRDLAVVLDEQVPAAEVLAEIRAVVRDEPAAASVRHV 759 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD ++GK L +KS+A ++ +Q T D+++ ++ I+ + + +A LR+ Sbjct: 760 RLFDQYRGKGLENKEKSLAFRLWMQHTDRTMSDEEVEAVVALILGRLTARFSARLRA 816 >gi|90579643|ref|ZP_01235452.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio angustum S14] gi|90439217|gb|EAS64399.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio angustum S14] Length = 795 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 424/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSV---ERNP 56 MKF+ SWL++ ++ V+ E++ +T GLEV D EA++ FT VKV V ++P Sbjct: 1 MKFSESWLREWVNPAVNSEELAHQITMAGLEV---DGIEAVAGEFTGVKVGQVVECAQHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D D + ++D G + + +VCGA N R G+ A G+ +P + + K+RG S Sbjct: 58 DADKLRVTKVDVGAEELLDIVCGASNCRQGIKVAVATVGAVLP-GDFKIKKAKLRGQPSH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL + +S IMEL DA +G ++L L D IDV LT NR+DC+ + G+A Sbjct: 117 GMLCSFTELGIDVESDGIMELAEDAVLGTDFREFLGLDDVTIDVDLTANRADCLSIAGLA 176 Query: 176 LDLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ ++ E I P ++++I +++K + C + V+ V P Sbjct: 177 REVGVLNRAEVTEPQFEIVAPTAADTIAIDVKA----PAACPRYLGRIVRNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G RSI +VDITNYV L+ G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGTRSIDPIVDITNYVLLEMGQPMHAFDLAKIDGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + + +IAGI GG+ +G + T DVL+E A + P I ++ G+ Sbjct: 293 NEAELNDNTLVIADNKQALAIAGIFGGEFSGVNTETKDVLLECAFFAPDAIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS +RFERGVD + ++ +LI+ +CGG + I A + P+ I ++ Sbjct: 353 HTDSSHRFERGVDATLQMKAMERATALIVEICGGEVAPIVEAESEADLPKAATIELRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E+ + IL RLG V ++ + P+WR D+ + DLVEE+ RI+G + Sbjct: 413 LDRLLGHSIASEEVVEILTRLGCDVETTDAGWKATAPAWRFDMAIEEDLVEEVGRIFGYN 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P+ + + +L R V+ +L R E + +SF+ EQ L Sbjct: 473 NIPNQSPVAALSMNLHKEANLPLKR---VRDLLVDRGYQEAITYSFVEPEQQKLIVPEIE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QK 585 L + PISADMS MR SL GLL N R +FE V E G Q+ Sbjct: 530 PLILPFPISADMSAMRLSLWTGLLNTVVFNQKRQQPRVRLFEAGLRFVPEQSAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ S W + VD FD K D +V+E + + F++ Sbjct: 590 MMLAGVIAGNR----SDEHWDIATNT----VDFFDLKGDLEAVLELTANEAAFSFKAAKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I + V G+ G HP + FGL+ FE+ +I R + Sbjct: 642 PALHPGQSAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIMFEIEWAAI----NSRMLPE 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 VV +S +RD+A +V++ + AG +V + N L+ DV +FDV+ GK + EG KS Sbjct: 697 AVV-VSKFPANRRDIAVVVNEDVLAGDVVAACRENGGELLTDVNLFDVYTGKGVEEGNKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T + DI ++ IV + +K A LR Sbjct: 756 LAIALTLQSAERTLEEADIASAVEAIVAALAEKFGASLR 794 >gi|89074400|ref|ZP_01160882.1| phenylalanyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] gi|89049887|gb|EAR55428.1| phenylalanyl-tRNA synthetase beta subunit [Photobacterium sp. SKA34] Length = 795 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 272/819 (33%), Positives = 424/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSV---ERNP 56 MKF+ SWL++ ++ V+ E++ +T GLEV D EA++ FT VKV V ++P Sbjct: 1 MKFSESWLREWVNPAVNSEELAHQITMAGLEV---DGIEAVAGEFTGVKVGQVVECAQHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D D + ++D G + + +VCGA N R G+ A G+ +P + + K+RG S Sbjct: 58 DADKLRVTKVDVGAEELLDIVCGASNCRQGIKVAVATVGAVLP-GDFKIKKAKLRGQPSH 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL + +S IMEL DA +G ++L L D IDV LT NR+DC+ + G+A Sbjct: 117 GMLCSFTELGIDVESDGIMELAEDAVLGTDFREFLGLDDVTIDVDLTANRADCLSIAGLA 176 Query: 176 LDLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ ++ E I P ++++I +++K + C + V+ V P Sbjct: 177 REVGVLNRAEVTEPKFEIVAPTAADTISIDVKAPV----ACPRYLGRIVRNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G RSI +VDITNYV L+ G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGTRSIDPIVDITNYVLLEMGQPMHAFDLAKIDGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + + +IAGI GG+ +G + T DVL+E A + P I ++ G+ Sbjct: 293 NEAELNDNTLVIADNKQALAIAGIFGGEFSGVNTETKDVLLECAFFAPDAIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS +RFERGVD + ++ +LI+ +CGG + I A + P+ I ++ Sbjct: 353 HTDSSHRFERGVDATLQMKAMERATALIVEICGGEVAPIVEAESEADLPKAATIELRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E+ + IL RLG V ++ + P+WR D+ + DLVEE+ RI+G + Sbjct: 413 LDRLLGHSIASEEVIEILTRLGCDVETTDAGWKATAPAWRFDMAIEEDLVEEVGRIFGYN 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P+ + + +L R V+ +L R E + +SF+ EQ L Sbjct: 473 NIPNQSPVAALSMNLHKEANLPLKR---VRDLLVDRGYQEAITYSFVEPEQQKLIVPEIE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QK 585 L + PISADMS MR SL GLL N R +FE V E G Q+ Sbjct: 530 PLILPFPISADMSAMRLSLWTGLLNTVVFNQKRQQPRVRLFEAGLRFVPEQSAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 M AG+ G+ S W + VD FD K D +V+E + + F++ Sbjct: 590 MMLAGVIAGNR----SDEHWDIATNT----VDFFDLKGDLEAVLELTAIVAAFSFKAAKH 641 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPG+S I + V G+ G HP + FGL+ FE+ +I R + Sbjct: 642 PALHPGQSAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIMFEIEWAAI----NTRMLPE 696 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 VV +S +RD+A +V++ + AG +V + N L+ DV +FDV+ GK + EG KS Sbjct: 697 AVV-VSKFPANRRDIAVVVNEDVLAGEVVAACRENGGELLTDVNLFDVYTGKGVEEGNKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q + T + DI ++ IV + +K A LR Sbjct: 756 LAIALTLQSAERTLEEADIASAVEAIVAALAEKFGASLR 794 >gi|254515024|ref|ZP_05127085.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] gi|219677267|gb|EED33632.1| phenylalanyl-tRNA synthetase, beta subunit [gamma proteobacterium NOR5-3] Length = 792 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 250/818 (30%), Positives = 423/818 (51%), Gaps = 40/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + +T GLEV+ ++ A + + ++ ++PD D Sbjct: 1 MKFSEQWLREWVNPALGSEALGHQITMAGLEVDAIEPVAGAFTGVIVAEITEAVQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +Q+VCGAPN R GL A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCTVDAGGGNTLQIVCGAPNARAGLKTPLAVVGAVLP-GDFAIKAAKLRGVESQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL LS++ I+ELP DAPVG L DYL+L D I++ LTPNRSDC+G+ GIA ++ Sbjct: 120 CAASELGLSEEKDGILELPADAPVGTDLRDYLKLDDVSIEIGLTPNRSDCLGLAGIAREV 179 Query: 179 VAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G L ++ + P + + + ++ +L ++ C + + GV + P WM Sbjct: 180 -----GLLNDLPVCAPPENVQAVTTDEAVEVELRATARCPRYLCRVIDGVDLSRPTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A VDITNY+ L+ G P H FD +I + VR A + E L++QE Sbjct: 235 QEKLRRCGVRSIDAAVDITNYLLLELGQPMHAFDLDKIKGGIIVREASAEESFTLLNDQE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L N+VIA R + AGI+GG + T +L+E A + P ++ ++ G+ T Sbjct: 295 ITLGEGNLVIADHERPLAFAGIMGGADSAVGQGTNRLLLESAFFAPEPLSGQARSFGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVK 412 DS +RFERGVD ++ L+L + GG A I ++ + P I + ++ Sbjct: 355 DSSHRFERGVDFCLQRRAMERATELLLEIVGGAAGPITEAVSEHNLPSPAPIHLRRARIE 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G+ + E RIL +G V +E +VPSWR D+ +ADL+EE+ R+YG + Sbjct: 415 RLLGVAIDDETVERILRGVGLEVAAVDGGWECAVPSWRFDLRIEADLLEELARVYGYNN- 473 Query: 473 KSEPLPLTQVEDKRNLSL---QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 LP+T++ L ++ R + ++R L +R E + +SF+ + Sbjct: 474 ----LPVTRIRADVVLPAIPEEKIRLKQLRRALVARDYYEAICYSFVDADIQKRLDPDVA 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYM 587 + + NPIS + + MR+SLL GLL++ NV R +FE + P+G Q+ Sbjct: 530 PVVLNNPISPEHAVMRSSLLAGLLRSAQHNVKRQQPRVRMFETGLRF-VPGPDGLSQRPG 588 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + GS EG W++ S R D +D K D +++E S FE+G S Sbjct: 589 LAMLITGSLAAEG----WAEPS----RNADFYDLKGDVEALLELTGDAASFHFEAGERSA 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG++ +K V G+ G HP + P+ E+ L+ + + Sbjct: 641 LHPGQTAWLKRGDSTV-GFIGALHPTLQKDLDFDLPVMVAELDLELLSAA-----VIPAF 694 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S ++RD+A +V++ + A L+ N+ + + D+ +FDV++GK + +KSVA Sbjct: 695 APVSRYPALRRDVAVVVNKSVTAAELLANVRASAGAYLRDLRLFDVYEGKGIDPARKSVA 754 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + Q T D+++ + ++++++ + A LR+ Sbjct: 755 LGLTFQDHSRTLDDNEVNKCIQQVIDSLKENYQAELRN 792 >gi|71066549|ref|YP_265276.1| phenylalanyl-tRNA synthetase subunit beta [Psychrobacter arcticus 273-4] gi|91208132|sp|Q4FQ66|SYFB_PSYA2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71039534|gb|AAZ19842.1| phenylalanyl-tRNA synthetase beta subunit [Psychrobacter arcticus 273-4] Length = 801 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 260/823 (31%), Positives = 430/823 (52%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 MK + WL+ ++ + S E++ D LT GLE++ + A S + +V+SVE++PD D Sbjct: 1 MKISEQWLRQWVNPNNSSEQLADQLTMAGLEIDDRFAVARAFSGVVVGEVISVEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 + +++ G + +Q+VCGAPNV VG+ A G+ +P ++ + +RG++S Sbjct: 61 KLRVTQVNIGAVEPLQIVCGAPNVTVGMKVPVATVGAVLPSDDGTGFKIKNGNLRGVDSN 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C E+ L+D+ ++ELP DAP+G + +YL L + I+D+S+TPNR DC VRGIA Sbjct: 121 GMLCGASEIDLTDNIDGLLELPTDAPIGTDIREYLGLDNQILDISITPNRGDCFSVRGIA 180 Query: 176 LDLVAAGLGKLKEINI---SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 ++ L+ NI + + +E++P + C + + + + + P Sbjct: 181 REISVINDLPLQMPNIPDNNQVIHNEAMP---AVTVSAVEACPRYFLQSISNIDRTIDTP 237 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+ L GLRS + LVD+TNYV ++ G P H FDA I + VR A E I L+ Sbjct: 238 KWMQDALVQSGLRSHNFLVDVTNYVLMELGQPLHAFDADTIVGDIVVRLAQPEETITLLN 297 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L+ D +VIA D ++AGI+GG+ + D+TT++++E A ++P+ IA + G Sbjct: 298 EQTISLTGDELVIADDKGALALAGIMGGQRSSVTDSTTNIVLESAFFNPLAIAARARRFG 357 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNS 409 + TD+ RFERGVD + L V LI S+ G A I N + P + I + Sbjct: 358 LHTDASQRFERGVDFELPALALARAVDLITSVTGSQAGQIVAMENSDHLPARAPITLPIT 417 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V+ + GI++ +RIL +LGF V + D + PS+R D+ K DL+EEI RIYG Sbjct: 418 KVRDVIGIEIEPVVMVRILTQLGFKVEQQADSLICTPPSYRFDMSIKEDLIEEIARIYGY 477 Query: 470 DQIKSEPLPLTQV----EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI-SKEQSVLF 524 D I S LP QV +D +L T +K L ME +++SF +K +++L Sbjct: 478 DNIPS-ILPHLQVSMDYDDTADL------THEMKLALVDNGYMEAISFSFSDAKLEALLD 530 Query: 525 GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 E L + NPIS+D++ MR +LL LL N++R + FE + + Sbjct: 531 DKALGEVLALANPISSDLAVMRRTLLSSLLPCVQYNLNRQQSRVRFFETGLSFVGHS--- 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 ++ ++ S I G +W D+ + R +D +D K D ++ + +R+E Sbjct: 588 ---VSDLVQTPSIAIVAVGDVW-DEQAYQNRALDFYDLKHDIEQLLPAKIDNARIRYERS 643 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 ++ HPG+S + + V G+ G+ HPN L+ + L P+ R + Sbjct: 644 QLAFLHPGQSAKLYIDDQYV-GWLGQLHPNTAKQLDLT---TTWVAQLSLAPLLTLAREQ 699 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGK 762 + S V+RD+A +VD I TL + I+ L+ D+ +FDV+QG+ + G+ Sbjct: 700 -HAITTPSKFPQVRRDIAILVDSDISLQTLESTIRKASGTLLTDLWLFDVYQGEKVPAGQ 758 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +S+A ++ Q T DD ++ D++V+ + + +A LR S Sbjct: 759 RSLAFALIWQDKTQTLSDDAVKTATDKVVQALTVEHSAQLRDS 801 >gi|300722784|ref|YP_003712075.1| phenylalanine tRNA synthetase subunit beta [Xenorhabdus nematophila ATCC 19061] gi|297629292|emb|CBJ89891.1| phenylalanine tRNA synthetase, beta-subunit [Xenorhabdus nematophila ATCC 19061] Length = 795 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 266/816 (32%), Positives = 424/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL++ + +S E + D +T GLEV+ V+ V +V+ ++P+ D Sbjct: 1 MKFSELWLREWANPAISREALFDQITMAGLEVDGVEKVAGQFHGVFVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLRVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++DD I+ELP DAP+G L +Y++L D I++S+TPNR+DC+ + G+A ++ Sbjct: 120 CSFSELDIADDQDGIIELPADAPIGTALREYMKLDDSAIEISITPNRADCLSIMGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQR 237 A + KL + + +I +D S C + +K V V P WMR++ Sbjct: 180 --AVINKLSMVEPKIEVVKPTIDATFPIRVDASEACPRYLGRVIKNVNVKAVTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VDITNYV L+ G P H FD R+ + VR A GEK+ LD E +L Sbjct: 238 LRRGGIRSIDPVVDITNYVLLELGQPLHAFDLDRLHGSIIVRLAEQGEKLTLLDGSEVEL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S + +VI+ + + ++AGI GG+++G + T ++L+E A + P+ I + G+ TD+ Sbjct: 298 SAETLVISDEKQSIAMAGIFGGEYSGVNAETQNILLECAFFAPLAITGRARRYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLS 415 +RFERGVD Q +++ L++ +CGG A ++ N ++ KP I ++ RL Sbjct: 358 HRFERGVDPQLQHKAMEYATQLLVEICGGEAGEVIDVTNESHLPKPAMITLNRQKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E IL RLG V + D ++V PSWR D++ + DLVEE+ RIYG + I Sbjct: 418 GHHITDEQVTDILTRLGCQVTVQKDNWQVVAPSWRFDMQIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V + NL L++ VK +L + E + +SF+ + Q L Sbjct: 478 PVRADLVMTSHREANLPLKR-----VKTMLVDKGYQEAITYSFVDPKIQQYLHPQQEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH---VYEN-DTPEGQKYMA 588 + NPISADMS MR SLL GLL N +R +FE YEN + Q+ M Sbjct: 533 LPNPISADMSAMRLSLLTGLLTTVVYNQNRQQNRVRLFETGLRFVPYENAEYGIRQELML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E WS + + VD FD K D SV+E L + F + Sbjct: 593 AGVIAGNRFDEH----WSIEKQA----VDFFDLKGDLESVLELTGKLSKISFRAEEHPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S + + GY G HP + L+ FE+ + + + K+V Sbjct: 645 HPGQSAGVYLENSYI-GYIGVIHPELERKLDLNGRTVVFELLWSG--LVDRVIPEMKEVS 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++ A ++ K V I + +FDV+ GK + EG KS+AI Sbjct: 702 RFPS---NRRDIAIVVPENVAAEDILAECKKVGVNHIVGINLFDVYCGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I +++ V + ++ A LR Sbjct: 759 SLILQDTTRTLEEEEIAATVNKCVAALEQRFQASLR 794 >gi|134301905|ref|YP_001121874.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. tularensis WY96-3418] gi|134049682|gb|ABO46753.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. tularensis WY96-3418] Length = 790 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 272/813 (33%), Positives = 423/813 (52%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKALNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|254369489|ref|ZP_04985501.1| phenylalanyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] gi|157122439|gb|EDO66579.1| phenylalanyl-tRNA synthetase [Francisella tularensis subsp. holarctica FSC022] Length = 790 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 271/813 (33%), Positives = 423/813 (52%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPKPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKTLNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|167627956|ref|YP_001678456.1| phenylalanyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597957|gb|ABZ87955.1| Phenylalanine--tRNA ligase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 790 Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust. Identities = 271/816 (33%), Positives = 430/816 (52%), Gaps = 53/816 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQNSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I +D + + + +VCGA N+ G+ A G+ +P + + K+RG ES GM Sbjct: 61 DKLNICTVDVAEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GDFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LP APVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPTVAPVGVDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P + + ++ D+ C + C +K V NNV P WM + Sbjct: 180 VSALTKTELKDLEILEPKVTITDTKDVNITATDA--CYAYYGCIIKNVNNNVQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD E Sbjct: 238 KLRRSGIGSISFFVDVTNYVLLLTGQPMHAFDLDKLDGSINVRYADNNEQLTLLDETEVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT + +E A + P IA + + TDS Sbjct: 298 LQSDTLVIADDSKALAIAGVMGGLDSSMTDSTTSIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI ++ R+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIKLINEIAGGEVAPIHGAEDLQKLNKQNKITLSIKKLNRV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D IE +L+ L V +D EV PS+R D+E DL+EE+ R+YG ++ Sbjct: 418 LGTDFDIEYVTEVLKALHMDVETSFDSNCIEVLPPSYRFDMEIPEDLIEEVARVYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + + L R E +N+SFI + F Q+ + Sbjct: 478 -PETMP-KYAATKINISETKQSYDVLNSRLVDRGYHEAINYSFIDPKFDYFF-FEQKGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA-AGI 591 I NPIS D+S MR SL+PGL+ + N R IFE ++ + + ++ AG+ Sbjct: 535 IRNPISQDLSVMRQSLMPGLINSFKANTSRQQNRIRIFEKGACFKLENNQRVQFNKIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFE-SGAPSWYH 649 G E WS + VD FD KAD IE + + L FE +W H Sbjct: 595 AYG----ELLNPNWS-----STKKVDFFDVKAD----IEALCADIADLNFEVCDDVNWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 PG+S I + +G G HP++L F + PI FE+ LD I +++K + K Sbjct: 642 PGQSAYI-LAGNNKIGVIGVIHPSVLKTFQIKAKAPIV-FELDLD-ILVNKKIPSFEK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ I +++ ++ DV +FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAINDLNISILKDVNIFDIYESEE--NVRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 + +L Q D+I+ L D+ +V+ TN +L Sbjct: 753 LSMLFQ--------DNIQTLEDK---TIVESTNQIL 777 >gi|83718629|ref|YP_443106.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|257139335|ref|ZP_05587597.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia thailandensis E264] gi|93140698|sp|Q2SVE3|SYFB_BURTA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83652454|gb|ABC36517.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia thailandensis E264] Length = 810 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 260/827 (31%), Positives = 423/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D +M LP D PVG + D L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I + + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVRAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PRWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTVELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVARSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFIADPAVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P V+ RF S Sbjct: 593 VEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA----RFVKAEHS 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRGARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSNTSS 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|77919024|ref|YP_356839.1| phenylalanyl-tRNA synthetase subunit beta [Pelobacter carbinolicus DSM 2380] gi|91208124|sp|Q3A4N8|SYFB_PELCD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|77545107|gb|ABA88669.1| phenylalanyl-tRNA synthetase beta subunit [Pelobacter carbinolicus DSM 2380] Length = 804 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 264/829 (31%), Positives = 448/829 (54%), Gaps = 51/829 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +WLK+ +D ++S +++ LT GLEV+ +D E L +++SV+++PD D Sbjct: 1 MIVTYNWLKEFVDFEMSPDELAHRLTMAGLEVDSMDFIGEGLDSVVTARLVSVDKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ +QVVCGA N + G + A G+ +P + + KIRG+ES GM+ Sbjct: 61 KLTVCQVDYGQ-DTVQVVCGATNHKAGDVVALATVGTVLP-GDFKIKKSKIRGMESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L+ DS IM L D G + + L L D ++ LTPNR DC+ V G+A + Sbjct: 119 CSEKELGLAQDSDGIMILSPDCEPGQPVFEVLGLKDVRYELGLTPNRPDCLSVLGVARE- 177 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 V+A G+ +N+ PLS ES ++D+ C +A ++GV+ +P+W+ + Sbjct: 178 VSAMCGRSLNVNLP-PLSEGDESTRALTSVTIEDAEYCPRYAARLIRGVKVGPSPDWLVR 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEY 295 +L++VG RS++ +VD+TN++ ++ G+P H FD R+++ + V+RA S E+ LD+ Sbjct: 237 KLESVGQRSVNNVVDVTNFILMELGHPLHAFDYQRLAEGRIVVKRAASKEQFTTLDSVSR 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L ++VI ++AG++GG+++ T D+L+E A ++P+ I R+ K L + ++ Sbjct: 297 SLEKSDLVICDGQGAVALAGVMGGENSEVVAETVDILLESAYFNPLAIRRTSKRLSLRSE 356 Query: 356 SRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITY-KP---RKIVFMNSE 410 + +RFERG D+ M+PV L +LI+ + GG +C + +P RK+ Sbjct: 357 ASHRFERGADI-AMVPVALDKAAALIVQVAGGV---VCKGMIDEFPRPLAERKVTLAVQR 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V + G+ + ++D L +G V + D+ V++PS+R D+E DLVEE+ R+ Sbjct: 413 VNEILGLKLGMDDIQAHLLSIGLEVQPVEEKDIDRLVVTIPSFRPDLERDIDLVEEVARL 472 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR---VLASRAMMEVVNWSFISKEQ--- 520 G D I P+T + L R VKR V+ + E VN+SF++ E Sbjct: 473 NGYDNI-----PVTMPAGRMLCHLPPQHLREVKRLRDVMVAAGFNETVNYSFVAPEAWDR 527 Query: 521 -SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + +RE ++ILNP++ D S MRTSL+P LL+ RNV +D +FE+ V+ Sbjct: 528 LELSDDDPRREPVKILNPLTEDQSVMRTSLVPSLLECVTRNVAYQNSDLHLFELRPVFLT 587 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 +D +K+ + G EG W E+ VD +D K +++ F Sbjct: 588 HTDDVLPIEKWRLCAVLCGRREQEG----WRQNDEK----VDFYDLKGVVEQILDSFNVA 639 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 S + ++ HPG+S +K + VLG GE HP +L F + P+ ++ + + Sbjct: 640 KVTWDGSSSENFLHPGKSCTLKQK-KTVLGTLGEVHPKVLAAFDIDQPVYLLDLDFEQLL 698 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQ 754 ++ LS V RD AF+VD+ IP + ++ ++ +L++D+ +FDV++ Sbjct: 699 MAAGGHGGFSA---LSRFPQVARDSAFLVDEDIPFSEISEVLNRSTGKLVEDIVLFDVYR 755 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK + EGKKS+AI+V + T +D++I+ D+IV+ ++ K A +R Sbjct: 756 GKGIPEGKKSLAIRVRYRSDDRTLKDEEIQKAHDKIVKALIAKLGAEIR 804 >gi|121605742|ref|YP_983071.1| phenylalanyl-tRNA synthetase subunit beta [Polaromonas naphthalenivorans CJ2] gi|120594711|gb|ABM38150.1| phenylalanyl-tRNA synthetase beta subunit [Polaromonas naphthalenivorans CJ2] Length = 808 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 260/838 (31%), Positives = 428/838 (51%), Gaps = 64/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 M+F SWL++ + +S E++ +TLT GLEVE++ + PF + +++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLSTEQLAETLTMAGLEVEEL--KPVAPPFINIVVGEIVEAVQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + VVCGAPN RVG L+G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQASMLTVVCGAPNARVGIRVPCALVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL IDAP+G + ++L+L D + + LTPN + C+ Sbjct: 117 GVESQGMLCSARELKLSEDHGGLLELAIDAPLGQDIREHLQLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A ++ A LK I P ++ I ++ + LC F+ V+ V + Sbjct: 177 VYGVAREVAALTGAPLKTPFI--PEAAVGISDKLAVKVSAPELCGRFSGRIVRNVNPQAS 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P+WM RL G RS++ALVDI+NYV + G PSH+FD +I L VR GE + Sbjct: 235 TPSWMVDRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKPGEMLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + +++S+AGI+GG D T V VE A W P IA + Sbjct: 295 LNGNTVTVDEKVGVIADENQVESLAGIMGGDATAVSDETKHVYVEAAFWWPKAIAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-----IARNITYKPRKI 404 TD+ +RFERGVD + ++ I LI+++C GT +C + N+ K + Sbjct: 355 YNFSTDAGHRFERGVDAGQTVEHIERITQLIMAIC-GTPDMVCGPIDDLQVNLP-KAAPV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + ++ G+ + L L+RLG V+ V+ PS+R D++ + DL+EE++ Sbjct: 413 TLRVARAAKVIGMPLTQAQCLDALQRLGLDVVIGDGTLTVTPPSYRFDLQIEEDLIEEVV 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVL 523 R+ G +Q+ P PL + + + + R+ + V+R LAS E +N+SF+ + Sbjct: 473 RMVGYNQLPETP-PLAPITAR--IRPEAERSPFAVRRALASLGYQETINFSFVEERWEHE 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G +++LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D P+ Sbjct: 530 LAGNPNPIKLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVNVFELGRVFLRD-PQS 588 Query: 584 QK-----------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 Q AG+ GS S WS + D FD K D +++ P Sbjct: 589 QNTDTTVAGFNQPMRVAGLSYGSR----SPLHWSQSD----KAADFFDIKGDVEALLAPL 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ F HPGR + + + + G+ GE HP + L+ FE+ LD Sbjct: 641 KAV----FAPATHPAMHPGRCASVSVAGQSI-GFVGELHPQWRQGYELAQAPLLFELELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVF 750 + + Q++ K V S L PV+RD+A IV + + L+ I N L+ T+F Sbjct: 696 A--VLQRQVPIFKPV---SKLQPVERDIAVIVQESVTHAALMAAIYGANTQGLLKGATLF 750 Query: 751 DVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV++ + S+ G+KS+AI++++ T D+ I + ++ ++ ++ LR+ Sbjct: 751 DVYRPQQANASMQLGEKSLAIRLVLSSDLATLTDEAIEAAVQAVLASLQRQLQVRLRA 808 >gi|332993561|gb|AEF03616.1| phenylalanyl-tRNA synthetase subunit beta [Alteromonas sp. SN2] Length = 795 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 264/829 (31%), Positives = 427/829 (51%), Gaps = 61/829 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S ++ + L+ GLEV+ V+ S + +V+ ++P+ D Sbjct: 1 MKFSEKWLREWVNPALSANELSEQLSMAGLEVDGVEPVAGEFSGVLVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +VCGAPN R G+ A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGDGEFRDIVCGAPNCREGIKVAVAVVGAVLP-GNFKIKKAKLRGEPSMGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAPVG + +YL+L D I+V LTPNR+DC+G+RGIA ++ Sbjct: 120 CSFSELGISDDHDGIIELPADAPVGTNIREYLDLDDTSIEVDLTPNRADCLGIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA---PN 232 G L +++ P S +I I +L C + ++ V NVA P Sbjct: 180 -----GVLNNLDVCEPAISPVAATIDDSIAINLSAPEACPRYVGRVLRNV--NVAAATPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W+ ++L+ G+RSI +VD+TN++ L+ G P H F+ + I + VR A GE + LD Sbjct: 233 WLSEKLRRCGIRSIDPIVDVTNFILLELGQPMHAFNLASIEGSVNVRMANKGETLTLLDE 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA D + ++AGI GG H+G + T D+L+E A + I + G+ Sbjct: 293 TEAKLNDDTLVIADDNKALAMAGIFGGLHSGVNTETKDILLESAFFSRDAIMGRARQYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TD+ +R+ERGVD Q ++ +LIL +CGG A + A P++ ++ Sbjct: 353 HTDASHRYERGVDSQLQRNAMERATALILDICGGEAGPVVEACEEDKLPKQASVLLRRDR 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R+ GI + L +LERLG V+ + +E PS+R D+ + DL+EE+ R+YG + Sbjct: 413 LARVLGITIDDAQVLEMLERLGLDVVQTNEGWEAKAPSYRFDIAIEEDLIEEVARVYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFIS-KEQSVLF 524 I V LS+ S+ +K +L SR E + +SF+ K QS LF Sbjct: 473 NIP-------HVAPTAALSMLPSQEAVLPINTMKSLLLSRGYNEAITYSFVDPKIQSALF 525 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPE 582 + + + +PIS+DMS MR SL PGLL AT N R +FE + + DTP Sbjct: 526 PDA-KSMVLPHPISSDMSVMRVSLWPGLLGATAYNQKRQQGRVRLFETGLRFIPQQDTPN 584 Query: 583 G--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLD 636 G Q+ + G+ G ++EE VD FDAKAD +++ Sbjct: 585 GVLQQQVIGGVVAGR------------RNEEHWDLGDNPVDFFDAKADVEALLALTGKTG 632 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 F S S HPG + I + E V GY G HP G++ + FE+ ++++ Sbjct: 633 EFSFVSAQHSALHPGMTAKILLNDEEV-GYIGAIHPQFTKLLGVNGRVFVFELEVEAV-- 689 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQ 754 K +S +RD+A V + G +++ I+ V++L+ + +FDV++ Sbjct: 690 ---VARKLPSAAPVSRFPSNRRDIAITVKDEVSVGNILSYIEKIGVNQLV-GLNLFDVYK 745 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK + G KS+A+ + +Q + T + +I+ +D +V+ + + A LR Sbjct: 746 GKGIEPGYKSLALSLHLQDPEKTLEEAEIQQAVDTVVKGLESEFEAALR 794 >gi|257466638|ref|ZP_05630949.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium gonidiaformans ATCC 25563] gi|315917792|ref|ZP_07914032.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] gi|313691667|gb|EFS28502.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium gonidiaformans ATCC 25563] Length = 795 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 263/821 (32%), Positives = 439/821 (53%), Gaps = 43/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D + ++ LT IG EVE ++ + + L I K++ +++P+ D Sbjct: 1 MLISLNWLKQYVDLKEDVLELEKALTMIGQEVENIEEQGKHLHHVVIGKIVDYQKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ + +Q+VCGAPN ++G V A G+ +P + + +IR +ES GM+ Sbjct: 61 KLTLLQVDTGE-ETLQIVCGAPNHKLGDKVVVAKIGAILP-GDFKIKKSEIRKVESYGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + + I+ LP DAP+G Y +L D + ++ +TPNR DC+ GIA ++ Sbjct: 119 CSEVELGIGTSADGIIILPEDAPIGEEYRKYAKLDDVVFELEITPNRPDCLSYIGIAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + + + K ++D C + +K V+ +P W++QR+ Sbjct: 179 GAYFERKIKYPMIVMDEIIDQVSTQAKITIEDKERCHRYMGRLIKNVKVGESPEWLKQRI 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 +++GL+ I+ +VDITN+V + P H FD ++S + + VR A GE+I+ LD E L Sbjct: 239 QSMGLKPINNIVDITNFVMFECNQPMHAFDFDKLSGNEIFVRAAKEGEEIVTLDGVERKL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + +VIA + +IAG+IGG+ D+NT ++ +EVA + P NI ++ + LGI TDS Sbjct: 299 NGE-LVIADGEKPIAIAGVIGGEATQIDENTKNIFLEVAYFTPENIRKTSRTLGIFTDSA 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSG 416 YR ERG+D +G+ + SLI + GG + + + + + +N E V + G Sbjct: 358 YRNERGMDPEGIPYAMDRAASLIQQVAGGEILSKPLDKYLVRRELTEIPINLEKVNKFVG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + ++ IL L +I Y + V+ PS R D+ AD+ EEI+R+YG D I++ Sbjct: 418 KALDLDTVGNILTNLEI-LIKPYGPNALLVTPPSHRADLTRPADIYEEIIRMYGFDNIEA 476 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + +P K ++S ++ RY +K++L + EV+N+SFI ++ +F Q Sbjct: 477 K-MP------KEDISAGKTAERYEIQENLKKLLTEMGLHEVINYSFIPQKARNIFHYSQP 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 LEI NP+S DM+ M+ +L LL N +R D EVS + EG+ Sbjct: 530 VLEIQNPLSEDMAIMKPNLQYSLLANVRDNFNRNQYDLKFGEVSKTFVK--VEGEDLAQE 587 Query: 590 GIRKGSSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 I GI +G LW+ E D +D KA +V+ + + + Sbjct: 588 DIH---LGIVLAGHKDKTLWNTGKES----YDFYDIKAYVETVLAE-MGIQNYNLIRSMD 639 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S +HPGRS I+ E + G FGE HP+I + + VYL + I+ K+ K Sbjct: 640 SNFHPGRSADIQIGRECI-GTFGEVHPDIAEAMEIKKE----RVYLAELNITTMKKYSKK 694 Query: 706 KVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 K+ + +S V RDLA ++DQ + G +V +I+ LI+ + +FDV+ G++LGEGKK Sbjct: 695 KLGYDRVSKYPAVLRDLAIVLDQDVLVGEMVKMIQKKHSLIEHIDIFDVYYGENLGEGKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+AI ++ + K T D +I + I++ + +K +R Sbjct: 755 SIAISIIFRDKKKTLSDTEIEENIQSILKLIREKYQGEIRQ 795 >gi|254796787|ref|YP_003081624.1| phenylalanyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] gi|254590023|gb|ACT69385.1| phenylalanyl-tRNA synthetase, beta subunit [Neorickettsia risticii str. Illinois] Length = 876 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 281/913 (30%), Positives = 433/913 (47%), Gaps = 146/913 (15%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MKFT WL +HLDT +SLE+I + L S+G EVE F + +V ++P D Sbjct: 1 MKFTFGWLLEHLDTTLSLEQIVEALISLGFEVENC--HSIGRGFVVAQVTECRKHPGADR 58 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 L QE+Q+VCGAPNVR GL V A G+ +P N M + KIRG ES GM+CS Sbjct: 59 LTLCKVFDGTQELQIVCGAPNVRGGLKVVLAQVGAVLPSNMMKIKKSKIRGCESLGMLCS 118 Query: 121 EKELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL L D+ I+EL D VG + DP+I++++TPNR D + V G+A +L Sbjct: 119 IEELGLPGGDNGGIIELSDDYRVGDTFT-----VDPLIEIAVTPNRGDVLSVHGVARELA 173 Query: 180 AAGLGKL------------KEINIS--CPLSSESIPL----------------------- 202 A G G L E N C S E+I + Sbjct: 174 AGGYGVLIDTCKASFDGLYAECNYKNRCRDSGEAINITANHDGNVFHSHITGSQGSAVID 233 Query: 203 -----------------EIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRS 245 I F++ D++ C+ F+ ++ V+N ++P+W+R +L+ VG++S Sbjct: 234 ELAGNLLKKDTSVEGDANILFNICDTTACRKFSGLVIRNVKNCISPDWLRSKLERVGVKS 293 Query: 246 ISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVI 304 ISALVDI NYV G P H++D +I+ + L V + + AL+++EY + P +++I Sbjct: 294 ISALVDIANYVMFSYGSPLHIYDLDKIAGETLQVSVSNEESYLAALNDKEYRVPPGSIII 353 Query: 305 AS-DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 D ++Q++AGIIG K + C +T ++ VE A++DP+ +A + + + I T+S YRFERG Sbjct: 354 RDRDMQLQAVAGIIGSKLSACTLSTRNIFVEAAVFDPVMVASTKRAMKINTESAYRFERG 413 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVKRLSGIDVPIE 422 VD L LI +C G I T RK + F S L+GI++ Sbjct: 414 VDPDFTEKALGLAAQLISDVCAGKKEKI--ESFFTKNERKFIDFSLSFFTELTGIEIDSG 471 Query: 423 DSLRILERLGFSV-----------IGEYDK------------------------------ 441 +++IL+ LGF V G Y Sbjct: 472 RAIQILKGLGFEVHEIRTPHDCTYSGSYSDNTNIGNRKNLATEDSIGDTHVSTAEFGVGS 531 Query: 442 ------FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 F V PSWR DV +A +VEE+LR+YG Q++S PL + K + + S+ Sbjct: 532 KKDLQIFRVVPPSWRNDVTTQACIVEELLRVYGYAQLRSTPL-----KSKIPVIFETSKE 586 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 ++ +L +R EVV W F+S+++ + L I NP+ A+ + MR S++P LL+ Sbjct: 587 DRIRELLLNRGFSEVVTWPFMSEKKC---SANRNVLHIKNPLGAEFNVMRPSIVPNLLEV 643 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 RN+ + IFE+ +Y E M AG+ G S + E+ Sbjct: 644 AQRNIKNGLHIIKIFEIGKIYSTICEE---KMLAGLMCGDS--------FPRNMHEKAHK 692 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFES-GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 +D FDAKAD +++ FE PS YHPG+ +K V G+ GE HP I Sbjct: 693 MDFFDAKADVEALLTSLDLGGRYSFEKCDGPSIYHPGKVANVKVEGREV-GFIGELHPRI 751 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD-QHIPA-GT 732 + I FE++L + S K + T V+RD +F+ D +P G Sbjct: 752 AS----NRQIIVFELFLAKLACSLKLKENT-----FGKFPIVERDFSFVFDLDKVPLWGD 802 Query: 733 LVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + + + I +VT+FD ++G G+ S+A V ++ ++I+ L D+I+ Sbjct: 803 IERGLYLISDFIKNVTLFDKYEGDFKGKRMLSLAFLVSMENQIQGLSQEEIKSLSDQIIC 862 Query: 793 NVVKKTNAVLRSS 805 + +K + LR S Sbjct: 863 FIEEKFSGTLRLS 875 >gi|254362043|ref|ZP_04978169.1| phenylalanine--tRNA ligase [Mannheimia haemolytica PHL213] gi|153093597|gb|EDN74565.1| phenylalanine--tRNA ligase [Mannheimia haemolytica PHL213] Length = 795 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 266/826 (32%), Positives = 434/826 (52%), Gaps = 55/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ +S E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + +++ P ++ +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDA++I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGIQVRMAKEGEELVLLDGTN 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA ++AGI GG+ +G +NT DV++E A + P+ I + G+ T Sbjct: 295 AKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLESAFFAPLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD + ++ +L+L +CGG A +I A + P++ + S++ Sbjct: 355 DASHRFERGVDPELTRQAMERATALLLEICGGEAGEIVEAVSQENLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + IL RLG +V + + PSWR D+E + DL+EEI RIYG + I Sbjct: 415 SVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPSWRFDIEIEEDLIEEIARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EV+ +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEANRIRM---ALVDSDYQEVITYSFVDPKKQSLLHPQQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D+ +G+ Sbjct: 532 ILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNRVRIFEAGLRFIPDS-----NAESGV 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR----FES 642 R+ + I G R W +KSE D FD K D IE +SL S+R F + Sbjct: 587 RQEFVFGAAIVGDKRPVHWENKSEA----ADFFDLKGD----IERILSLTSIRHDLQFVA 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQK 699 HPG+S I + + G+ G HP+I+ FG+ E+ +I P++Q Sbjct: 639 KQFPALHPGQSAAIMLDGKEI-GFIGTVHPSIVQKFGIKGKPIVCEILASAIAERPVTQA 697 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKS 757 +S RD+A +VD+ +PAG ++ + ++L+ V +FDV++G + Sbjct: 698 G--------EISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLV-AVNLFDVYRGSN 748 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS+AI + +Q + T +++I ++ ++ + + NAVLR Sbjct: 749 LESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLR 794 >gi|325927164|ref|ZP_08188427.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas perforans 91-118] gi|325542477|gb|EGD13956.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas perforans 91-118] Length = 792 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 248/786 (31%), Positives = 414/786 (52%), Gaps = 40/786 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELAATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEIN--ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + + P+S+ ++ +E+ D C ++G+ + P W+ Sbjct: 179 AAACASEVVAFDAGMVAPVSTRTLAVELDAGKDAPRYCG----RVIEGIDPSAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VR + SGE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLQGPIGVRHSRSGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I GR ++AG++GG D T +V +E A + P I G+ LG+ TD Sbjct: 295 TLDESFLTITDAGRPVALAGLMGGLDTRVTDTTRNVFLESAYFAPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPQPARIRLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG V + +EV PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDADVVRMLRALGMHVEAVAESWEVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P +++ L + V+R L +R + E +N++F+ + + + Sbjct: 475 TTLPGGASRIAMPSETQLDE---LSVRRQLVARELQETINYAFVDAALLERWQLTEGLVP 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKYM 587 + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P +++ Sbjct: 532 LANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADAGAAPGESQHV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D +++ S L F+ + Sbjct: 592 AAAVCGDALALQ-----WG----EPARKVDFHDLKGDLMALAA--ASGAQLEFQPSTQPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + +G+ G+ HP + + + FE+ L +P+ Q+ + + Sbjct: 641 GHPGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQL--MPLVQRALPRAGE- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G KS+A Sbjct: 697 --LSRFPSVRRDLAFLVSDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKSLA 754 Query: 767 IQVLIQ 772 + +++Q Sbjct: 755 MGLILQ 760 >gi|115314951|ref|YP_763674.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. holarctica OSU18] gi|115129850|gb|ABI83037.1| phenylalanine--tRNA ligase [Francisella tularensis subsp. holarctica OSU18] Length = 790 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 271/813 (33%), Positives = 423/813 (52%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDHIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIKLINEIAGGEVAPIHGAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINIFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKTLNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|294670487|ref|ZP_06735367.1| hypothetical protein NEIELOOT_02205 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307766|gb|EFE49009.1| hypothetical protein NEIELOOT_02205 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 719 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 241/718 (33%), Positives = 388/718 (54%), Gaps = 45/718 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPQDAPVGANIREYLDLDDTVFTLKITPNRADCLSIKGIARE 179 Query: 178 LVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A K+ I + P++ S P++I D + C F ++ V A P+WM Sbjct: 180 VSALTGCAFKQPAIHAAPITGSRKQPVQI----DAPADCGRFISRVIENVNARAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKT 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +V+A + S+AG++GG + D+T ++++E A + P IA + G + Sbjct: 296 VSLSENTLVVADEKGALSLAGLMGGAASAVSDDTQNIVLEAAWFAPEIIAGKSRQYGFGS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD + ++ L+L +CGG A ++ A + +++ +K + Sbjct: 356 DSSFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEALGRLPENKQVELRLGRLKTV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 416 LGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENI-- 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P T K + R R+ V +A+R EVV+++F+ ++ F + + Sbjct: 474 -PDDYTSGRLKMLALPETRRPRFAVYNEMAARGYREVVSYAFVDEQWEHDFAANANPIRL 532 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP++A + MR++L+ GL++ N++R +FE++ V+ K Sbjct: 533 QNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFS---------------K 577 Query: 594 GSSGI----EGSGRLW-----SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GS G E G LW ++ E+ R D +D KAD +E + + F Sbjct: 578 GSDGRFVQNERIGGLWYGAVMPEQWGEKTRNADFYDIKAD----VENLLKNKWVEFVKTE 633 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ + +KKR Sbjct: 634 HPALHPGRAANIVSDGQ-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV-LERKKRA 689 >gi|206559852|ref|YP_002230616.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia cenocepacia J2315] gi|198035893|emb|CAR51785.1| phenylalanyl-tRNA synthetase beta chain [Burkholderia cenocepacia J2315] Length = 809 Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 417/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + + L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P++ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVNVELDETLPVRIA----APDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG E D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATHETRRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DNPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFESGRVFVADPSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 AVEGHAQPKRVGALAYGPALDEQWGVTTRAVDFFDVKGDLEALLAPAVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L +P FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEIDGRAV-GWIGELHPRLMQKYELPHPPVMFEIDADAL-IARALPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMAR 802 >gi|253688280|ref|YP_003017470.1| phenylalanyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754858|gb|ACT12934.1| phenylalanyl-tRNA synthetase, beta subunit [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 795 Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust. Identities = 262/824 (31%), Positives = 427/824 (51%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ V E + + +T GLEV+ V+ A + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVDSETLSEQITMAGLEVDGVEPVAGAFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGTDIRDYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L ++ ++ P + +I +D C + VKG+ A P WM Sbjct: 180 AV-----LNQLALNAPAIEPVAATIQDTFPIQVDAPQACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD R++ + VR A GE + LD E Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLNGGIIVRMAKEGETLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA ++ GI GG+H+G ++ T +VL+E A ++P++I + G+ T Sbjct: 295 AKLNADTLVIADQQSALAMGGIFGGEHSGVNEATQNVLLECAYFNPLSITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFM 407 D+ +R+ERGVD P L+H L++ +CGG A + + P + I Sbjct: 355 DASHRYERGVD-----PALQHNAIERATRLLIDICGGEAGPVVDVTSTADLPTRATITLR 409 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++ RL G + E IL+RLG +V ++ + PSWR D+E + DLVEE+ RIY Sbjct: 410 REKLDRLIGHVIADEQVSDILQRLGCNVTRTDAGWQATAPSWRFDMEIEEDLVEEVARIY 469 Query: 468 GVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G + I + P PL + R SL R VK +L E + +SF+ + L Sbjct: 470 GYNNIPNIPTQAPLI-MTSHREASLSLKR---VKTLLVDHGYQEAITYSFVDPKIQGLIH 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 + L + +PISA+MS MR SL GLL A N +R + +FE + D+ Sbjct: 526 PDEASLSLPSPISAEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFVPDSSADLG 585 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q M AG+ G+ + + + + VD +D K D +V+ L + F+ Sbjct: 586 IRQDLMLAGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSEIEFK 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPG+S I E + G+ G HP + L+ FE+ D ++ + Sbjct: 638 AENNPALHPGQSAAIYLGEERI-GFIGVIHPELERKLDLNGRTVVFELLWDK--VADRVL 694 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 + +V S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + Sbjct: 695 PEANEV---SRFPANRRDIAVVVAENVPAGDILAECKKVGANQLV-GVNLFDVYRGKGVA 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+AI + +Q T +++I + V + ++ A LR Sbjct: 751 EGYKSLAISLTLQDTTRTLAEEEIAATVAECVAALKQRFQASLR 794 >gi|89256519|ref|YP_513881.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. holarctica LVS] gi|156502632|ref|YP_001428697.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010639|ref|ZP_02275570.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FSC200] gi|254367848|ref|ZP_04983868.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|290954083|ref|ZP_06558704.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|295312531|ref|ZP_06803294.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. holarctica URFT1] gi|89144350|emb|CAJ79637.1| Phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica LVS] gi|134253658|gb|EBA52752.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica 257] gi|156253235|gb|ABU61741.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. holarctica FTNF002-00] Length = 790 Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust. Identities = 271/813 (33%), Positives = 423/813 (52%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESVFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RIYG + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDMEIPEDLIEEVARIYGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINIFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKTLNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|107022553|ref|YP_620880.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia cenocepacia AU 1054] gi|116689502|ref|YP_835125.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia cenocepacia HI2424] gi|170732807|ref|YP_001764754.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia cenocepacia MC0-3] gi|105892742|gb|ABF75907.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia cenocepacia AU 1054] gi|116647591|gb|ABK08232.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia cenocepacia HI2424] gi|169816049|gb|ACA90632.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia MC0-3] Length = 809 Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 417/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + + L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P++ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVNVELDETLPVRIA----APDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG E D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATHETRRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DNPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFESGRVFVADPSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 AVEGHAQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L +P FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEIDGRAV-GWIGELHPRLMQKYELPHPPVMFEIDADAL-IARTLPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMAR 802 >gi|227327040|ref|ZP_03831064.1| phenylalanyl-tRNA synthetase subunit beta [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 795 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 259/819 (31%), Positives = 424/819 (51%), Gaps = 41/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ V E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVDSETLSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP+DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPVDAPIGTDIREYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E I P+++ ++ P+++ D C + VKG+ A P WM Sbjct: 180 AVLNQLTLNEPTIE-PVTATIQDTFPIQV----DAPQACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD R++ + VR A E + LD E Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLNGGIIVRMAKEDETLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA ++ GI GG+H+G ++ T +VL+E A ++P++I + G+ T Sbjct: 295 AKLNADTLVIADQQSALAMGGIFGGEHSGVNEETQNVLLECAYFNPLSITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD ++ L++ +CGG A + + P + I ++ Sbjct: 355 DASHRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTSEADLPTRATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G + E IL+RLG +V ++ + PSWR D+E + DLVEE+ RIYG + I Sbjct: 415 RLIGHVIADEQVSDILQRLGCNVAKTDAGWQATAPSWRFDMEIEEDLVEEVARIYGYNNI 474 Query: 473 KSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + P PL + R SL R VK +L E + +SF+ + L + Sbjct: 475 PNIPTQAPLI-MTSHREASLSLKR---VKTLLVDHGYQEAITYSFVDPKIQGLIHPNEAS 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + +PISA+MS MR SL GLL A N +R + +FE + DT Q Sbjct: 531 LSLPSPISAEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFVPDTSADLGIRQDL 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G+ + + + + VD +D K D +V+ L + F++ Sbjct: 591 MLAGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSEVEFKAENNP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I E + G+ G HP + L+ FE+ D + + Sbjct: 643 ALHPGQSAAIYLCGERI-GFIGVIHPELERKLDLNGRTVVFELLWDKV-----ADRVLPE 696 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKS 764 +S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + EG KS Sbjct: 697 ANEISRFPANRRDIAVVVAENVPAGDILAECKKVGANQLV-GVNLFDVYRGKGVAEGYKS 755 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q T +++I + V + ++ A LR Sbjct: 756 LAISLTLQDTTRTLAEEEIAATVAECVAALKQRFQASLR 794 >gi|241668518|ref|ZP_04756096.1| phenylalanyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877052|ref|ZP_05249762.1| phenylalanyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843073|gb|EET21487.1| phenylalanyl-tRNA synthetase subunit beta [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 790 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 270/817 (33%), Positives = 431/817 (52%), Gaps = 50/817 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQNSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I +D + + + +VCGA N+ G+ A G+ +P + + K+RG ES GM Sbjct: 61 DKLNICTVDVAEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GDFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L++ + +M+LP DAPVG ++ YL L+D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLAEKADGLMDLPTDAPVGVDINKYLNLNDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK++ I P + ++ D+ C + C +K V NNV P WM + Sbjct: 180 VSALTKTELKDLEILEPKVIITDTKDVNITATDA--CYAYYGCIIKNVNNNVQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVLLLTGQPMHAFDLDKLDGSINVRYADNNEQLTLLDETQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +VIA D + +IAG++GG + D+TT + +E A + P IA + + TDS Sbjct: 298 LQSDTLVIADDSKALAIAGVMGGLDSSITDSTTSIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRL 414 +RFERGVD Q +K + LI + GG + I A ++ K KI ++ R+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIKLINEIAGGEVAPIHGAEDLQKLNKQNKITLSIKKLNRV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D IE +L+ L V +D EV PS+R D+E DL+EE+ R+YG ++ Sbjct: 418 LGTDFDIEYVTEVLKALHMDVETSFDSNCIEVLPPSYRFDMEIPEDLIEEVARVYGYSKL 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 E +P K N+S + + L R E +N+SFI + F Q+ + Sbjct: 478 -PETMP-KYAATKINISETKQSYDVLNSRLVDRGYHEAINYSFIDPKFDDFF-FEQKGIA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY-MAAGI 591 I NPIS D+S MR SL+PGL+ + N R IFE ++ + + ++ AG+ Sbjct: 535 IRNPISQDLSVMRQSLIPGLINSFKANTSRQQNRIRIFEKGACFKLENNQRVQFDKIAGL 594 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFE-SGAPSWYH 649 G E WS + VD FD KAD IE + + L FE +W H Sbjct: 595 AYG----ELLNPNWS-----STKKVDFFDVKAD----IEALCADIADLNFEVCDDVNWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 PG+S I + +G G HP++L F + PI FE+ LD I +++K + K Sbjct: 642 PGQSAYI-LAGNNKIGVIGVIHPSVLKTFQIKAKAPIV-FELDLD-ILVNKKIPSFEK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ I +++ ++ D+ +FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAISDLNISILKDLNIFDIYESEE--NARKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +L F+D+D + L D I+ V ++LR Sbjct: 753 LTML-------FQDND-KTLDDIIINQAVDSALSILR 781 >gi|167620271|ref|ZP_02388902.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia thailandensis Bt4] Length = 810 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 261/830 (31%), Positives = 426/830 (51%), Gaps = 48/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D +M LP D PVG + D L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHGGLMILPEDTPVGQDIRDALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 GIA + A L +I P+ +E++P+ I LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIR-PVRAELTETLPVTISA----PDLCGRFSGRVIRGVNAR 233 Query: 229 V-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 234 AKTPRWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +L VI+ D +++S+AGI+GG +TT++ +E A W P +I Sbjct: 294 KLLNGNTVELDETVGVISDDAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRA 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IV 405 + TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 354 RKYNFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVS 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ R Sbjct: 412 MRASRANRIIGVEIDKDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVAR 471 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F Sbjct: 472 IYGFEKIPARP-PVARSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFA 529 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEG 583 G + +LNPI++ +S MRT+L L+ N++R +FE V+ D G Sbjct: 530 GNDNPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFIADPAVKAG 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + + G G + ++ R VD FD K D +++ P V+ RF Sbjct: 590 ELAVEGYAQPKRIGALAYGPVVDEQWGATTRQVDYFDVKGDLEALLAPVVA----RFVKA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 S HPGR I+ V G+ GE HP ++ + L + FE+ D++ +++ Sbjct: 646 EHSALHPGRGARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-VARALPAP 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS- 757 ++ +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 704 SE----VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALAEDACKFVQKVALFDEFRAKSN 759 Query: 758 ----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 760 TSSGMSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|257452982|ref|ZP_05618281.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium sp. 3_1_5R] gi|317059522|ref|ZP_07924007.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] gi|313685198|gb|EFS22033.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. 3_1_5R] Length = 795 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 262/821 (31%), Positives = 439/821 (53%), Gaps = 43/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D + ++ LT IG EVE ++ + + L I K++ +++P+ D Sbjct: 1 MLISLNWLKQYVDLKEDVLELEKALTMIGQEVENIEEQGKHLHHVVIGKIVDYQKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ + +Q+VCGAPN ++G V A G+ +P + + +IR +ES GM+ Sbjct: 61 KLTLLQVDTGE-ETLQIVCGAPNHKLGDKVVVAKIGAILP-GDFKIKKSEIRKVESYGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + + I+ LP DAP+G Y +L D + ++ +TPNR DC+ GIA ++ Sbjct: 119 CSEVELGIGTSADGIIILPEDAPIGEEYRKYAKLDDVVFELEITPNRPDCLSYIGIAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K I + + + K ++D C + +K V+ +P W++QR+ Sbjct: 179 GAYFERKIKYPMIVMDEIIDQVSTQAKITIEDKERCHRYMGRLIKNVKVEESPEWLKQRI 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 +++GL+ I+ +VDITN+V + P H FD +++ + + VR A GE+I+ LD E L Sbjct: 239 QSMGLKPINNIVDITNFVMFECNQPMHAFDFDKLAGNEIFVRAAKEGEEIITLDGVERKL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + +VIA + +IAG+IGG+ D+NT ++ +EVA + P NI ++ + LGI TDS Sbjct: 299 NGE-LVIADGEKPIAIAGVIGGEATQIDENTKNIFLEVAYFTPENIRKTSRTLGIFTDSA 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSG 416 YR ERG+D +G+ + SLI + GG + + + + + +N E V + G Sbjct: 358 YRNERGMDPEGIPYAMDRAASLIQQVAGGEILSKPLDKYLVRRELTEIPINLEKVNKFVG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + ++ IL L +I Y + V+ PS R D+ AD+ EEI+R+YG D I++ Sbjct: 418 KALDLDTVGNILTNLEI-LIKPYGPNALLVTPPSHRADLTRPADIYEEIIRMYGFDNIEA 476 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + +P K ++S ++ RY +K++L + EV+N+SFI ++ +F Q Sbjct: 477 K-MP------KEDISAGKTAERYEIQENLKKLLTEMGLHEVINYSFIPQKARNIFHYSQP 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 LEI NP+S DM+ M+ +L LL N +R D EVS + EG+ Sbjct: 530 VLEIQNPLSEDMAIMKPNLQYSLLANVRDNFNRNQYDLKFGEVSKTFVK--VEGEDLAQE 587 Query: 590 GIRKGSSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 I GI +G LW+ E D +D KA +V+ + + + Sbjct: 588 DIH---LGIVLAGHKDKTLWNTGKES----YDFYDIKAYVETVLAE-MGIQNYNLIRSMD 639 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S +HPGRS I+ E + G FGE HP+I + + VYL + I+ K+ K Sbjct: 640 SNFHPGRSADIQIGRECI-GTFGEVHPDIAEAMEIKKE----RVYLAELNITTMKKYSKK 694 Query: 706 KVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 K+ + +S V RDLA ++DQ + G +V +I+ LI+ + +FDV+ G++LGEGKK Sbjct: 695 KLGYDRVSKYPAVLRDLAIVLDQDVLVGEMVKMIQKKHSLIEHIDIFDVYYGENLGEGKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+AI ++ + K T D +I + I++ + +K +R Sbjct: 755 SIAISIIFRDKKKTLSDTEIEENIQSILKLIREKYQGEIRQ 795 >gi|227355320|ref|ZP_03839721.1| phenylalanyl-tRNA synthetase beta chain [Proteus mirabilis ATCC 29906] gi|227164544|gb|EEI49415.1| phenylalanyl-tRNA synthetase beta chain [Proteus mirabilis ATCC 29906] Length = 795 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 267/816 (32%), Positives = 422/816 (51%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E++ + LT GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEELSEQLTMAGLEVDGVEPVAGDFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P N + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GNFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S++ I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISENHEGIIELPADAPIGTDIREYLKLNDNAIEISITPNRADCLGIMGVARDI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS---LCKGFAMCCVKGVRNNVAPNWMR 235 + ++S ++ S ++ + + L + F VK P WM+ Sbjct: 180 AVINKMTCQIPDMSPIAATSSATFPVRVEAPQACPRYLGRVFTNVNVKAN----TPLWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN+V L+ G P H FD + + VR GEK+ LD E Sbjct: 236 EKLRRGGIRSIDPIVDITNFVLLEMGQPLHAFDLDHVDGAVVVRMGKEGEKLTLLDGNEI 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + + +AGI GG+ +G ++ T +V +E A + P+ I + G+ TD Sbjct: 296 TLKDDVLVIADEKQALGMAGIFGGESSGVNEATKNVFLECAFFSPLAITGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD ++ L+L +CGG +I N +Y P I +++ R Sbjct: 356 ASHRFERGVDSALQYQAIERATKLLLEICGGEVGEIIDVTNDSYLPHVAPIKLTRAKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + E + L RLGF V E D + +VPSWR DVE + DL+EE+ RIYG + I Sbjct: 416 LLGHVIDDEQVVDSLTRLGFGVTVENDGWLATVPSWRFDVEIEEDLIEEVARIYGYNNIP 475 Query: 474 SEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 PL + D R L R VK +L E + +SF+ + L + L Sbjct: 476 DVPLRADLIMTDHREADLPLKR---VKTMLVDNGFQEAITYSFVDPKIQSLLHPNEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMA 588 + NPISADMS MR SLL GLL N +R A +FE + V +N G Q+ M Sbjct: 533 LPNPISADMSAMRLSLLTGLLTTVVYNQNRQQARVRLFEAGLRFVPDNQAEYGIRQELML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G+ E W+ + + VD FD K + S++E LD + F+ S Sbjct: 593 AGVIAGNRYEEH----WTLEKQT----VDFFDLKGNIESILELTGQLDEITFKPANHSAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I E + G G HP + L+ FE+ D+ I+ + + K V Sbjct: 645 HPGQSAEIYLRNEYI-GCIGVVHPELERKLDLNGRTVVFEIRWDA--IANRNLPQAKAVS 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V + A ++ K V I + +FDV+ GK + EG KS+AI Sbjct: 702 RFPS---NRRDIAVVVPNDVAAEDILAECKKVGGNQIVGINLFDVYCGKGVAEGYKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q ++ T +D+I ++ V + ++ A LR Sbjct: 759 SLILQDIEHTLEEDEIAATVNTCVAALKQRFQASLR 794 >gi|254245605|ref|ZP_04938926.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] gi|124870381|gb|EAY62097.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia cenocepacia PC184] Length = 809 Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust. Identities = 265/821 (32%), Positives = 417/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + + L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P++ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVNVELDETLPVRIA----APDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG E D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRAIRIIGVKIDADEIADIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATHETRRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DNPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFESGRVFVADPSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 592 AVEGHAQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA----RFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L +P FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHPPVMFEIDADAL-IARTLPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAANEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMAR 802 >gi|207724056|ref|YP_002254454.1| phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) (phers) protein [Ralstonia solanacearum MolK2] gi|206589265|emb|CAQ36227.1| phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) (phers) protein [Ralstonia solanacearum MolK2] Length = 809 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 272/831 (32%), Positives = 427/831 (51%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE VD S + V+ V R+PD D Sbjct: 1 MQFPESWLRSFVNPPITTAELSHRLTMAGLEVEDVDPVAPPFSQIVVGHVVEVNRHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + V K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCALVGAELPPGD--DGKPFKIKVGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS++ A ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEEHAGLLILPEDTPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ S+ +P+++ D LC F+ ++GV Sbjct: 179 GVARE-VSALTGAPVTLPSMAPVAVTLSDKLPVKV----DAPDLCGRFSGRVIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVARIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VIA + I+S+AGI+GG A +T ++ VE A W P I + Sbjct: 294 LLNGDTIAVDEKVGVIADEQAIESLAGIMGGDKAAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVF 406 TD+ +RFERGVD + ++ I +LIL +CGG A I I T P ++ Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISTLILEICGGQAGPIDDHIVNLPTRAPVRMRV 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + R+ GI + + RLG + E D F V PS+R D+E + DL+EE+ RI Sbjct: 414 --ARAARVLGIALTNATVSDVFTRLGLAFRVEGDDFIVDPPSYRFDLEIEEDLIEEVARI 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG +QI ++P P+ E + + RT + V+ +A+R EVVN++F+ E F Sbjct: 472 YGFEQIPAKP-PVA--ESAMRPTDEARRTMHDVRHAVAARDYSEVVNFAFVETEWEADFA 528 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG 583 G + + +LNPI++ S MR++LL GLL N++R + +FEV V+ + D +G Sbjct: 529 GNTQPIALLNPIASQYSVMRSTLLGGLLDKVRYNLNRKASRVRLFEVGRVFRRDADVADG 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +A + +G G ++ + R VD FD K D S++ P + RFE Sbjct: 589 GLSVAGYAQPMRAGGIAYGPATEEQWGVQTRAVDFFDVKGDVESLLWPLQA----RFERA 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGRS + +G+ GE HP L + L + +E+ LD+ I+ Sbjct: 645 EHPALHPGRSARVVLDGR-AIGWIGELHPRWLQKYDLPSAPVAWELDLDA--ITAVGLPA 701 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVFDVFQGK- 756 ++V + + V RD+A +V Q + LV+ R + V +FD F+ K Sbjct: 702 YREVPRVPA---VTRDIALVVRQDVAVQDLVDAFGKAALGMPWQRYLQGVVLFDEFRPKA 758 Query: 757 ---SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 759 ATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLRA 809 >gi|161524947|ref|YP_001579959.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|189350305|ref|YP_001945933.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia multivorans ATCC 17616] gi|160342376|gb|ABX15462.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans ATCC 17616] gi|189334327|dbj|BAG43397.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia multivorans ATCC 17616] Length = 809 Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust. Identities = 268/827 (32%), Positives = 418/827 (50%), Gaps = 43/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQMTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDALNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 GIA + A L + I P+ E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVEIRPAPVELDETLPVRIS----APDLCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRTPVKMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVQIDADEIANIFTRLGLPFERDGDVFSVTPPSHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATNETRRS-IHDIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFETGRVFIADPSVKAGELT 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +E ++ S RF Sbjct: 593 VEGYAQPKRVGALAYGPAFDEQWGIATRAVDFFDVKGD----LEALLAPASARFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 649 ALHPGRSARIEVEGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARALPAPTD- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + TL + +K + R + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQAVEVQTLFDEMKQALADDACRFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +VE + + A LR Sbjct: 763 GLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVE-CMARAGARLR 808 >gi|330445804|ref|ZP_08309456.1| phenylalanyl-tRNA synthetase, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489995|dbj|GAA03953.1| phenylalanyl-tRNA synthetase, beta subunit [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 795 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 267/818 (32%), Positives = 420/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ E++ +T GLEV+ V+ FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVNSEELAHQITMAGLEVDGVE--AVAGEFTGVKVGQVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + + +VCGA N R G+ A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGAEELLDIVCGASNCRQGIKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D IDV LT NR+DC+ + G+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVLGTDFREFLGLDDVTIDVDLTANRADCLSIAGLAR 177 Query: 177 DLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ ++ E I P ++++I +++K + C + ++ V P W Sbjct: 178 EVGVLNRAEVTEPQFEIVAPTAADTIAIDVKA----PAACPRYLGRIIRNVNVQAETPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G RSI +VDITNYV L+ G P H FD ++I + VR A GEK+ LD Sbjct: 234 MQEKLRRCGTRSIDPIVDITNYVLLEMGQPMHAFDLAKIDGGIVVRMAEQGEKLTLLDGN 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ + +VIA + + +IAGI GG+ +G + T DVL+E A + P I ++ G+ Sbjct: 294 EAELNDNTLVIADNKQALAIAGIFGGEFSGVNTETKDVLLECAFFAPDAIRGRARSYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS +RFERGVD ++ +LI+ +CGG + I A + P+ I +++ Sbjct: 354 TDSSHRFERGVDATLQTKAMERATALIIEICGGEVAPIVEAESEADLPKAATIELRRTKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 RL G + E+ + IL RLG V ++ P+WR D+ + DLVEE+ RIYG + Sbjct: 414 DRLLGHSIASEEVVEILTRLGCDVETTDAGWKAVAPAWRFDMAIEEDLVEEVGRIYGYNN 473 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I ++ P+ + + +L R V+ +L R E + +SF+ EQ L Sbjct: 474 IPNQSPVAALSMNLHKEANLPLKR---VRDLLVDRGYQEAITYSFVEPEQQKLIVPEIEP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QKY 586 L + PISA+MS MR SL GLL N R +FE + E G Q+ Sbjct: 531 LILPFPISAEMSAMRLSLWTGLLNTVVFNQKRQQPRVRLFEAGLRFIPEESAENGMRQEM 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G+ S W + VD FD K D +++E + + F++ Sbjct: 591 MLAGVIAGNR----SDEHWDIATNT----VDFFDLKGDLEAILELTANEAAFSFKAAKHP 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I + V G+ G HP + FGL+ FE+ +I R + Sbjct: 643 ALHPGQSAAIVVDGKEV-GFIGTVHPELERKFGLNGRTIVFEIEWAAI----NTRMLPEA 697 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 VV +S +RD+A +V + + AG +V+ + N L+ DV +FDV+ GK + EG KS+ Sbjct: 698 VV-VSKFPANRRDIAVVVSEDVAAGDVVDACRANGGELLTDVNLFDVYTGKGVEEGNKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q + T + DI ++ IV + +K A LR Sbjct: 757 AIALTLQSAERTLEEADIASAVEAIVAALAEKFGASLR 794 >gi|258544543|ref|ZP_05704777.1| phenylalanyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] gi|258520174|gb|EEV89033.1| phenylalanyl-tRNA synthetase, beta subunit [Cardiobacterium hominis ATCC 15826] Length = 798 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 258/826 (31%), Positives = 418/826 (50%), Gaps = 51/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ + E + + LT GLEV+ ++ S + +VL++ +PD D Sbjct: 1 MLLSTDWLKEAYGIALPPELLAERLTMAGLEVDSMERAAPEFSGVVVAQVLTLNPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D+G + +Q+VCGAPNV VG+ A G+ +P ++ + K+RG+ES GM+ Sbjct: 61 KLRVASVDSGHGEPLQIVCGAPNVAVGVKVPLATIGAVLP-GDLRIKKSKLRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LSD+ A ++ LP DAPVG + DYL L+D IID+ LTPNR+DC + G+A ++ Sbjct: 120 CSARELGLSDEHAGLLILPEDAPVGADIRDYLRLNDAIIDIDLTPNRADCFSMLGLAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL---------CKGFAMCCVKGVR-NN 228 +L PL + + + D++L C + ++G+ Sbjct: 180 AQLCRAELGADYRLPPLETAGVAIS-----SDATLTIENRAPQDCPRYLGRIIRGIDIGR 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P + +RL+ G+R+ +VDITNYV L G P H FDA ++ + +R+A +GE + Sbjct: 235 ATPPHIAERLRRAGIRTHDPVVDITNYVMLTLGTPLHAFDADKVQGGIIIRQANAGETLR 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L++ E + D ++IA + +IAG++GG + C D T ++++E A ++P IA + Sbjct: 295 LLNDSEATFTGDELLIADTEKALAIAGVMGGVDSACSDTTQNIILEAAWFNPPRIAGKAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVF 406 + +DS RFERGVD + LI +CGG A +I + + T P++ I Sbjct: 355 RFSLSSDSAQRFERGVDYTLQETAINLAARLITEICGGEAEEIAASVSATDLPQRSAITL 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G + ILE LG V + + PSWR D+ ADL+EEI RI Sbjct: 415 QRAAIAQRVGREYDDAIVTHILEGLGGDVQYRDGIWTIIPPSWRFDLAIPADLIEEIARI 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G + P L VE + ++ RY VL ++ E V +SFI + F Sbjct: 475 DGYAHV---PDRLPAVEYQHGAG-EKRALRYYGDVLVAQGFQEAVTYSFIDRASHQAFFP 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE---- 582 + + NPISA+++ MR SLLPGL+ A N +R D +FE+ V+ T + Sbjct: 531 EATTINLQNPISANLAEMRLSLLPGLVNAVIYNRNRQQQDVRLFEIGRVFLPQTDKTIAD 590 Query: 583 -GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRF 640 Q AG+ G + E W+ ++ R +D FD KA V+E + + + + Sbjct: 591 CAQPTRLAGVMSGLAAPEQ----WAAEA----RKIDFFDVKA----VVETLLLQIPGISY 638 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF-GLSNPICGFEV-YLDSIPISQ 698 ++ HPG+ I S LG G HP +L I FE+ L +P + Sbjct: 639 HPSQQTYLHPGKGADIYDSEGRYLGCVGALHPQLLQTLDSRGGEIYAFELDDLAWLPAAH 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 R +T + V+RDLA +VD++I A ++ I+ + L+ D FD++QG S Sbjct: 699 LPRYRT-----IGKFPAVRRDLALVVDKNIAAADILACIRTQIGALLADTWCFDLYQGVS 753 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG K+S+A+ +L+Q + T +D+++ ++D V + NA LR Sbjct: 754 LGN-KQSLAVAILLQDSEKTLQDEEVASIIDATVTQLKNTFNAELR 798 >gi|317064638|ref|ZP_07929123.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] gi|313690314|gb|EFS27149.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium ulcerans ATCC 49185] Length = 799 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 248/819 (30%), Positives = 441/819 (53%), Gaps = 39/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D + ++ + LT IG EVE +D + + L+ I +++ ++P+ D Sbjct: 5 MLISLDWLKQYVDIKEDINQLENALTMIGQEVEAIDVQGKDLNNVVIGQIIEYGKHPNSD 64 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ +++Q++CGAPN ++G V A G+ +P + + KIR +ES GM+ Sbjct: 65 KLTLLKVDIGEEEKLQIICGAPNHKLGDKVVVAKIGAVLP-GDFKIKKSKIRDVESCGML 123 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + +D I+ LP DAP+G Y + D I ++ +TPNR DC+ GIA ++ Sbjct: 124 CSQVELGIGEDKDGIIILPEDAPIGEEYRKYAGMDDVIFELEITPNRPDCLSHIGIAREV 183 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K + + ES K ++D CK + +K V + +P W+++R+ Sbjct: 184 AAYYGRKVKYPSYALNEVIESTNNYAKVRVEDKERCKRYMGRVIKNVTISESPEWLKKRI 243 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDL 297 +A+GL+ I+ +VD+TN+V + P H FD ++ + + +R A +GE+I LD E +L Sbjct: 244 RAMGLKPINNIVDVTNFVMFEYNQPMHAFDLDKLENQTVVIRAAETGERITTLDGVEREL 303 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA + + +IAGIIGG+ + T ++ +EVA + P NI +S K LGI+TDS Sbjct: 304 NNGELVIADEVKPIAIAGIIGGQATQIEQETKNIFLEVAYFTPENIRKSAKRLGIVTDSG 363 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-VFMN-SEVKRLS 415 YR ERG+D++ + V+ +L+ + G D I + I KP+K + +N +++ Sbjct: 364 YRNERGLDIENISEVIDRAAALMAEVASGEVLDEVIDKYIE-KPQKFEIPLNINKLNNFI 422 Query: 416 GIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + + RI LG + D V+ P++RQD+ DL EE++R+YG + I++ Sbjct: 423 GKKLEFDQVGRIFTNLGLGIKTLSQDTLVVTPPAYRQDLTRPEDLYEEVIRMYGFENIEA 482 Query: 475 EPLPLTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + VED + ++ S +K +L + EV+N++FI KE + ++ +E Sbjct: 483 ----IMPVEDIGSGLKDVKISVADNLKEILKEIGLHEVINYTFIPKEALDILHIKEKAIE 538 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 I NP+S DMS +R +L+ LL N++R + +EVS V+ P + +A Sbjct: 539 ISNPLSEDMSIVRPTLIYSLLANIRDNLNRNQFNLRFYEVSKVF---APAEE--LAKEDL 593 Query: 593 KGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + I G LW+ K E + + K ++E + + + E +HP Sbjct: 594 RICIAIAGKPERTLWNPKPES----YNFYTIKGYVEKLLE-YTGISRYKLERSTKDIFHP 648 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ-----KKRTKTK 705 GRS I+ +I+ G FGE HP++ + + VY+ I +++ K K + Sbjct: 649 GRSADIRIGNDII-GTFGEIHPDVQEAMDIKRE----RVYVADIDLTRALKYMKNAVKYE 703 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +VV V RDLA ++D+ + G +++ +K V LI+ + +FDV++G+ + KKSV Sbjct: 704 RVVKYPE---VTRDLAIVLDKTVLVGNMIDDLKKVSPLIEKIDIFDVYEGEKIDGDKKSV 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 AI ++++ K T + +I ++++++ + K N +R Sbjct: 761 AISIILRDKKKTLTEKEINNVIEKVLNTISKNYNGEIRQ 799 >gi|145298938|ref|YP_001141779.1| phenylalanyl-tRNA synthetase subunit beta [Aeromonas salmonicida subsp. salmonicida A449] gi|142851710|gb|ABO90031.1| phenylalanyl-tRNA synthetase, beta subunit [Aeromonas salmonicida subsp. salmonicida A449] Length = 799 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 262/823 (31%), Positives = 424/823 (51%), Gaps = 45/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SW+ + + T++S + + +T GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSKSWVMEWVRTELSDNALAEQITMAGLEVDAVEAVAGQFNNVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGEAELLDIVCGAPNCRAGLKVCVAKVGATLP-GDFTIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP DAP+G + DYL L+D IDV LTPNR+DC+G+ G+A ++ Sbjct: 120 CSFSELGIDVEADGIIELPADAPIGTDIRDYLNLNDVSIDVDLTPNRADCLGIVGLAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + ++ ++ + C + +KG+ +P WM Sbjct: 180 -----GVLNSVDVVEPTWAPAVATCDATFSIRVEAPADCPRYLGRVIKGLNLQAKSPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI A+VDITN++ L+ G P H FD ++++ L VRRA + E + LD E Sbjct: 235 QEKLRRGGIRSIDAIVDITNFLLLEYGQPMHAFDLAKLAGELVVRRAHADEPMTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA +AGI GG G + TTD+L+E A + P++I + G+ T Sbjct: 295 VKLKESTLVIADAKGPACMAGIFGGDRTGVSETTTDILLECAFFAPLSITGRARAYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD----ICIARNITYKPRK--IVFMN 408 DS +RFERGVD + V+ L+L +CGG + ++ + P+ I Sbjct: 355 DSSHRFERGVDPELQAKVMDRATRLLLDICGGECGGEAGPVIEVKSDAHLPKAAPIKLRR 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +++ ++ GI V + IL RLG V + D + PSWR D+ + DL+EE+ RIYG Sbjct: 415 TKLDKVIGISVADAQVVEILTRLGMQVTIDADGWTALAPSWRFDIAIEEDLIEEVARIYG 474 Query: 469 VDQIKS-EPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + I + +P L VE Q + V+ +L R E + +SF+ + L Sbjct: 475 YNNIPNLKPAASLAMVEQAEG----QVTLKRVRDLLVDRGFQEAITYSFVDPKAQQLLYP 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--- 583 + + NPIS +MS MR SL PGL++A N +R +FE + D Sbjct: 531 QSDAIVLPNPISVEMSAMRVSLFPGLVQAVVYNQNRQQPRVRLFEQGLRFIKDASAENGI 590 Query: 584 -QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ M AGI G+ S W K+ R D FD K D +V++ + FE Sbjct: 591 RQEPMLAGIITGNQ----SDEHWDIKT----RAADFFDLKGDLEAVLDLTAEGATFSFER 642 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-IPISQKKR 701 S HPG+S I + E V G+ G HP++ GL FE+ L+ IP Sbjct: 643 AEHSALHPGQSAAILRNGE-VFGHIGVIHPSLEKKLGLKTRAIMFELELNKLIP------ 695 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 K +S +RD+A +VD+ + AG ++ +IK V + + +FDV+QG + E Sbjct: 696 AKVPLAAEVSRFPANRRDIAVVVDRQVLAGDVLAVIKKVGGNQVVGINLFDVYQGAGMAE 755 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI +++Q + T + +I +D +V + ++ NA LR Sbjct: 756 DKKSLAISLVLQDTQRTLEEKEIAETVDNVVRALGEELNASLR 798 >gi|296133373|ref|YP_003640620.1| phenylalanyl-tRNA synthetase, beta subunit [Thermincola sp. JR] gi|296031951|gb|ADG82719.1| phenylalanyl-tRNA synthetase, beta subunit [Thermincola potens JR] Length = 807 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 437/827 (52%), Gaps = 43/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ + WL++++D VS E++ + LT G+ VE ++ + + KV +ER+P+ D Sbjct: 1 MRVSYKWLQEYVDIPVSPEELAERLTFSGVAVENIEYLGKDIEKVVTAKVEKIERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + +Q+V GAPNV G + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLVVCSVNCGQAENLQIVTGAPNVAEGQIVALALVGAKLP-GGIKIGKSKLRGVESAGMV 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L D I+ LP P+G + L L D I+++ LTPNR+DC+ + Sbjct: 120 CSAQELGLDPKGFPPDQQEGIIVLPEGTPLGEDIKKVLGLDDVILELELTPNRADCLSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A ++ A + IS P +SE I +K ++ LC + V+ ++ +P Sbjct: 180 GVAREVSAVLGTDFRPPRISVPETSEKIDGLVKVVIEAPELCNRYIGRLVRNIKVAPSPE 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALD 291 WM+QRL+A G+R IS +VD+TNYV ++ G P H FD +I + ++ VRRA GEKI+ LD Sbjct: 240 WMQQRLRAAGVRPISNIVDVTNYVMMELGQPLHAFDFDKIQEQIIIVRRAGEGEKIVTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 NQE L+ D +VIA ++AG++GG + +NT +VL+E A ++ ++ R+ + LG Sbjct: 300 NQERALNSDMLVIADGCVPVAVAGVMGGLDSEITENTVNVLLESACFNGPSVRRTSRALG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA------SDICIARNITYKPRKIV 405 + +++ RFE+GVD G + + LI + G + C N+ +I Sbjct: 360 LRSEASLRFEKGVDPNGCLRAIDRAAQLIAEMGAGEIVAGVVDNYPCPVENL-----QIT 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + R+ G D+P E + IL RL V + + V+VP++R D+ + DL+EE++R Sbjct: 415 LRPARLNRVMGTDIPTETMVDILNRLQLPVEAKDEVLLVTVPTFRGDIAREVDLMEEVVR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLF 524 +YG ++I +E LPL + + + +Q V+ +L + E++ +SFI+ K +L Sbjct: 475 LYGYNRIPTE-LPLGRSTQGKK-TFEQGMQDKVRSILTGFGLNEIITYSFINPKAFDMLN 532 Query: 525 GGGQRELE----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + EL + NPIS + MRT+LL G+L+ RN+ R D A+FE+ +++ Sbjct: 533 LPAESELRNAVVVQNPISEEQGVMRTTLLHGMLEVVARNLARKNKDLALFEMGNIF---I 589 Query: 581 P-EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 P G+K + G+ W+ K+E +D F K +++E V S Sbjct: 590 PVAGEKLPREELTLGAVVTGNRPENWNQKAEP----MDFFYLKGILETLLEELGVKETSF 645 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 G P+ HPGR+ + + V G+ GE HP +++ + LS E+ L+ I Sbjct: 646 VPFPGHPAL-HPGRTAQVLLAGRPV-GFIGEVHPEVMENYRLSGRAYVMELALEEIIAVS 703 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 KTK L V+RD+A +V + + A L+ I+ L+ +V +FDV+QG+ Sbjct: 704 ---VKTKMYRSLPKYPGVERDMAVVVKEEVLAADLLAEIRQQGGPLLKNVRLFDVYQGEQ 760 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +G KS+A L Q T D+++ L ++I + K A LR+ Sbjct: 761 IQKGYKSLAYAFLFQSSDRTLTDEEVNDLYEKIQNALQTKFGAQLRA 807 >gi|257470430|ref|ZP_05634521.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium ulcerans ATCC 49185] Length = 795 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 248/819 (30%), Positives = 441/819 (53%), Gaps = 39/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D + ++ + LT IG EVE +D + + L+ I +++ ++P+ D Sbjct: 1 MLISLDWLKQYVDIKEDINQLENALTMIGQEVEAIDVQGKDLNNVVIGQIIEYGKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++D G+ +++Q++CGAPN ++G V A G+ +P + + KIR +ES GM+ Sbjct: 61 KLTLLKVDIGEEEKLQIICGAPNHKLGDKVVVAKIGAVLP-GDFKIKKSKIRDVESCGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + +D I+ LP DAP+G Y + D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSQVELGIGEDKDGIIILPEDAPIGEEYRKYAGMDDVIFELEITPNRPDCLSHIGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K + + ES K ++D CK + +K V + +P W+++R+ Sbjct: 180 AAYYGRKVKYPSYALNEVIESTNNYAKVRVEDKERCKRYMGRVIKNVTISESPEWLKKRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDL 297 +A+GL+ I+ +VD+TN+V + P H FD ++ + + +R A +GE+I LD E +L Sbjct: 240 RAMGLKPINNIVDVTNFVMFEYNQPMHAFDLDKLENQTVVIRAAETGERITTLDGVEREL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA + + +IAGIIGG+ + T ++ +EVA + P NI +S K LGI+TDS Sbjct: 300 NNGELVIADEVKPIAIAGIIGGQATQIEQETKNIFLEVAYFTPENIRKSAKRLGIVTDSG 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-VFMN-SEVKRLS 415 YR ERG+D++ + V+ +L+ + G D I + I KP+K + +N +++ Sbjct: 360 YRNERGLDIENISEVIDRAAALMAEVASGEVLDEVIDKYIE-KPQKFEIPLNINKLNNFI 418 Query: 416 GIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + + RI LG + D V+ P++RQD+ DL EE++R+YG + I++ Sbjct: 419 GKKLEFDQVGRIFTNLGLGIKTLSQDTLVVTPPAYRQDLTRPEDLYEEVIRMYGFENIEA 478 Query: 475 EPLPLTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + VED + ++ S +K +L + EV+N++FI KE + ++ +E Sbjct: 479 ----IMPVEDIGSGLKDVKISVADNLKEILKEIGLHEVINYTFIPKEALDILHIKEKAIE 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 I NP+S DMS +R +L+ LL N++R + +EVS V+ P + +A Sbjct: 535 ISNPLSEDMSIVRPTLIYSLLANIRDNLNRNQFNLRFYEVSKVF---APAEE--LAKEDL 589 Query: 593 KGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + I G LW+ K E + + K ++E + + + E +HP Sbjct: 590 RICIAIAGKPERTLWNPKPES----YNFYTIKGYVEKLLE-YTGISRYKLERSTKDIFHP 644 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ-----KKRTKTK 705 GRS I+ +I+ G FGE HP++ + + VY+ I +++ K K + Sbjct: 645 GRSADIRIGNDII-GTFGEIHPDVQEAMDIKRE----RVYVADIDLTRALKYMKNAVKYE 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +VV V RDLA ++D+ + G +++ +K V LI+ + +FDV++G+ + KKSV Sbjct: 700 RVVKYPE---VTRDLAIVLDKTVLVGNMIDDLKKVSPLIEKIDIFDVYEGEKIDGDKKSV 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 AI ++++ K T + +I ++++++ + K N +R Sbjct: 757 AISIILRDKKKTLTEKEINNVIEKVLNTISKNYNGEIRQ 795 >gi|186476311|ref|YP_001857781.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia phymatum STM815] gi|184192770|gb|ACC70735.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia phymatum STM815] Length = 810 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 267/832 (32%), Positives = 427/832 (51%), Gaps = 52/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL+ +D ++ ++ LT GLEVE D R A P + + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTAELSHALTMAGLEVE--DLRPAAPPTSKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENN--MIVNVRK 108 D + ++D G + +VCGAPNV V L+G PP E + + K Sbjct: 59 ADKLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAQLPPAE---EGGAPFAIKLSK 115 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG++S GM+CS +EL LS+D + ++ LP D P+G + + L L D I ++ LTPN++DC Sbjct: 116 LRGVQSEGMLCSARELKLSEDHSGLLILPEDTPIGQDIRETLNLDDTIFEIKLTPNKADC 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + V G+A + A L+ + I P+ +E++P++I LC F+ ++GV Sbjct: 176 LSVFGVARETAAITGAPLRPLEIK-PVEVKLNETLPVKIS----APDLCGRFSGRVIRGV 230 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 +P WM +RL+ G RSISALVDI+NYV L+ G PSHVFD +I + VR G Sbjct: 231 NARAKSPAWMIERLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGSMDVRWGKRG 290 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + L+ ++ VIA D I+S+AGI+GG +TT++ +E A W P +I Sbjct: 291 ESLKLLNGNTVEVDETVGVIADDRHIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIR 350 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + TD+ +RFERGVD + ++ I LIL +CGG A + + + R+ Sbjct: 351 GRSRRYNFSTDAGHRFERGVDYSTTVEHIERITQLILDICGGEAGPVD-DQVVNVPKREP 409 Query: 405 VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 V M + R+ G+ + ++ +I RLG D F V+ P +R D+E + DL+EE+ Sbjct: 410 VKMRVARANRIIGVAIGGDEIAQIFARLGLPFERAGDDFLVTPPPYRFDIEIEEDLIEEV 469 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG ++I + P P+ + E +R Q+S ++ LA+R E VN+SF+ E Sbjct: 470 ARIYGFERIPARP-PIARSEMRRTNETQRS-IHMLRHALAARDYAETVNFSFVDAEWEQD 527 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TP 581 F G R + +LNPI++ +S MRT+L L+ N++R +FE V+ +D Sbjct: 528 FAGNDRPVRLLNPIASQLSVMRTTLFGSLINVLRHNLNRRADRIRVFEAGRVFLHDPSVK 587 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 G+ + + G G + ++ R VD FD K D +E + RF Sbjct: 588 AGELAVEGLAQPKMIGALAYGPVIEEQWGAATRAVDFFDVKGD----LEALFAPSDARFV 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGRS I+ +G+ GE HP + + L + FEV +++ + + Sbjct: 644 KAEHPALHPGRSARIELDGR-AIGWIGELHPRWMQKYDLPHAPILFEVEAEAL-MQRALP 701 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-----IIKNVDRLIDDVTVFDVFQGK 756 T T+ +S PV+RD+A +VDQ I L + + + + I V +FD F+ K Sbjct: 702 TPTE----VSKFPPVRRDIAIVVDQKIEVQALFDEMQKALSEEACKTIQRVALFDEFRAK 757 Query: 757 S-----LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S L +KS+A +V +Q T +D+ + + + +V+ + + A LR Sbjct: 758 SNTSGGLAAHEKSLAFRVTLQDTGGTLQDETVDLAIQTVVDRLARVYGARLR 809 >gi|30248956|ref|NP_841026.1| pheT; phenylalanyl-tRNA synthetase beta chain protein [Nitrosomonas europaea ATCC 19718] gi|41018326|sp|Q82VV6|SYFB_NITEU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|30138573|emb|CAD84864.1| pheT; phenylalanyl-tRNA synthetase beta chain protein [Nitrosomonas europaea ATCC 19718] Length = 788 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 261/817 (31%), Positives = 423/817 (51%), Gaps = 42/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF----TIVKVLSVERNP 56 MKF+ +WL+ +D S E++ LT GLEVE V ++PF + +V+SV+++ Sbjct: 1 MKFSGNWLRKLVDLQYSDEELAHKLTMAGLEVESV---APVAPFFDKVVVAQVVSVQKHA 57 Query: 57 DLD-CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + D + ++D G + +Q+VCGA NV+ G+ V A G+ +PE + + KIRG+E Sbjct: 58 NADRLNVCKVDVGTQSDGFLQIVCGAQNVKEGMKTVCALVGARLPE--LDIRQGKIRGVE 115 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS KEL L+ D+ ++ELP D PVG Y L D I + LTPNR+DC+G+ G Sbjct: 116 SLGMLCSAKELGLASDADGLLELPGDTPVGVDFRKYYSLDDCIFTLKLTPNRADCLGMFG 175 Query: 174 IALDLVA--AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA- 230 IA ++ A A L EI P+ + + + + ++ C + +KGV + A Sbjct: 176 IAREVAAITASELDLPEIVFVNPVIEDVLQIRV----EEPESCPLYCGRVIKGVATDTAI 231 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM QRL+ GLR I+ +VDI NY L+ G P H FD ++I+ + VR A E +L L Sbjct: 232 PLWMSQRLERAGLRMINPVVDIINYAMLETGQPMHAFDLNQINQEICVRFAGENEHLLLL 291 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + + L D +VIA + ++AGI+GG +G + T DV +E A + P+ I+ L Sbjct: 292 NGERLTLQKDMLVIADSSKPLALAGIMGGSESGVTNTTIDVFLESAFFSPVVISGKSFKL 351 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G +DS +RFERGVD VL+ +LIL +CGG A + N + + Sbjct: 352 GFTSDSAHRFERGVDFSMTRSVLERATALILEICGGKAGPVTEIGNDLPRREAVRVRQKR 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + ++ G+D +E +RL FS + F V P+ R D+ + D +EEI R++G D Sbjct: 412 IAKILGVDFSVELISEYFQRLQFSYTIAGEMFYVVPPAARFDLVIEEDFIEEIARVHGYD 471 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + LP V S + ++++L ++ EV+N++F+ + F G Sbjct: 472 LIPAR-LPKAPVHMLAEPETGVSPVKRLRQILTAKDYQEVINYTFVDTQWEADFSGNDIP 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMA 588 + + NPI++ M MR+SL GL+ N++R + IFE+ + E D + + +A Sbjct: 531 IRLKNPIASHMDVMRSSLFGGLIDNLQFNLNRKQSRVRIFELGSCFSKEGDEEKEVENLA 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 A SG + ++ R +D +D K D S+ P S+ FE Sbjct: 591 ALC---------SGSAYPEQWGVPDRDIDFYDVKMDIESLFWP----RSVYFELALHPAL 637 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + V G+ GE HP + LS FE+ +++ + Sbjct: 638 HPGKSARILIDKKPV-GWIGELHPRWQSKYHLSQSAILFELRTEALAAEL-----LPAMY 691 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 LS PV+RD+A +V+ + +L+ + DR I ++++FD++ G+ L +GKKS+A Sbjct: 692 PLSKFPPVRRDIAVVVESDVSVASLLETMHLEKDRSISEISLFDLYSGEKLVQGKKSLAF 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++L+Q + T D +I + ++V + +K A LRS Sbjct: 752 RILLQDSEKTLTDQEIDRAVSQLVGILERKFGATLRS 788 >gi|21243320|ref|NP_642902.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas axonopodis pv. citri str. 306] gi|30316245|sp|Q8PJE5|SYFB_XANAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21108862|gb|AAM37438.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas axonopodis pv. citri str. 306] Length = 792 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 252/803 (31%), Positives = 417/803 (51%), Gaps = 48/803 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELSATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELMQIVCGAPNARAGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISCPL--SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + S+ S+ +E+ D C ++G+ P W+ Sbjct: 179 AAACASEVVAFDAVAVAPVSTRSLAVELDAGKDAPRYCG----RVIEGIDPAAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLETLHGPIGVRRSRAGEQLALLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD Sbjct: 295 TLDDSFLTITDAGRAVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI--VFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + P+ + + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPQPVHIRLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG V + +EV PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDADVVRMLRALGMHVEAVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P +++ L + V+R L +R + E +N++F+ + + + Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTEGLVP 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKYM 587 + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P +++ Sbjct: 532 LANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADTGAAPGESQHV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D +++ S L F+ + Sbjct: 592 AAAVCGDALALQ-----WG----EPARKVDFHDLKGDLMALAA--ASGAQLEFQPSTQPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + +G+ G+ HP + + + FE+ L +P+ Q+ + + Sbjct: 641 GHPGRSADIYREG-VCIGWIGQVHPRLAKALDIDVDVIAFELQL--MPLVQRTLPRAGE- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G KS+A Sbjct: 697 --LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKSLA 754 Query: 767 IQVLIQPLKDTFRDDDIRILMDR 789 + +++Q D+ R L DR Sbjct: 755 MGLILQ--------DNSRTLTDR 769 >gi|150020701|ref|YP_001306055.1| phenylalanyl-tRNA synthetase subunit beta [Thermosipho melanesiensis BI429] gi|149793222|gb|ABR30670.1| phenylalanyl-tRNA synthetase, beta subunit [Thermosipho melanesiensis BI429] Length = 778 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 267/823 (32%), Positives = 446/823 (54%), Gaps = 69/823 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF------TIVKVLSVER 54 MK + WLKD ++ D + E++ + L+ G VE E ++PF + KVL +E+ Sbjct: 1 MKLSFEWLKDFVNIDKTAEEVAEKLSLTGTNVE-----EIINPFDVDGKIVVGKVLEIEK 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P+ D I+ ++D G +V G +V L A + + +I+ RK+RGI Sbjct: 56 HPNADRLIVCKVDIGNEVR-TIVTGDLSVSKDDLVPLALENTRL--GKLIIKPRKMRGIL 112 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S+ + + D PVG + +Y +L D ++D+ +TPNRSDC+ V G Sbjct: 113 SEGMLCSLQELGLEEKSSGVYKFKDDVPVGTDVIEYFKLRDKVLDIEITPNRSDCLSVLG 172 Query: 174 IALDLVA---AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 IA ++ A L K KEIN S + +EI+ + D C + +KGV+ Sbjct: 173 IAREVSAIYDVDLNLKEKEIN-----SKDEHNIEIRIESDG---CYRYTSRIIKGVKIKE 224 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+++RL A G+R I+ +VDITNYV L+ G+P H FD R + + V+ A GE+IL Sbjct: 225 SPMWLQKRLIASGIRPINNIVDITNYVMLEMGHPVHAFDL-RNTPKIVVKDAKGGEEILL 283 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + Y L + V+I +I ++ GI+GG+ +G ++TT++L+EVA++DP+ I ++ K Sbjct: 284 LDGKTYKLMGNEVLITDGEKILALGGIMGGEESGVKEDTTEILLEVAMFDPVRIRKASKY 343 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 GIITDS YRFERG+D + V+ + L+L L GG S+I N + I F S Sbjct: 344 HGIITDSSYRFERGMDPNDSLRVINRLTELVLELAGGIPSEIKDVVNKKIESTIIDFDFS 403 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYG 468 K++ GI++P E ++IL RLGF V ++ +V VP++R D+ DLVEEI RIYG Sbjct: 404 MTKKIIGIEIPKERQIKILNRLGFEV----NENKVKVPTFRYFDITRSIDLVEEISRIYG 459 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ I EP +T + R+ ++ + RY +K L + +E +N SF+S++ S+ G Sbjct: 460 MENINGEPFKITTNSNSRS---KEQKLRYMLKDALKNEGFLEAMNLSFVSRKWSI---NG 513 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKY 586 Q+ ++I NPI+ ++S MR SLL GLL++ N R I D +FEV V+ E D Sbjct: 514 QK-VKISNPINEELSVMRPSLLNGLLESLAYNYKRQIRDIKLFEVGKVFMEKDGKPFDVE 572 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 A + +G+L + + R +D + K +V+ F S F Sbjct: 573 KVAAV--------ATGKLNKNDYTD-PRKIDFYTFKGMVENVLNEFNI--SASFIPHNLE 621 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILD-FFGLSNPICGFE-----VYLDSIPISQKK 700 + P R I + E V G G F P+ +D +F + + + FE VY + + I + K Sbjct: 622 GFVPTRLAKIIVNNEEV-GIIGMFDPDFMDKYFDVKDEVYAFELSTDFVYENFVEIPEYK 680 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGE 760 + + V+RD++ +V + G ++N + + +++V + D+++GK + + Sbjct: 681 ES--------AQFPSVRRDVSILVPDNFLLGDVINSLFKY-QYVEEVGISDIYKGKGIEK 731 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+ I + + T +++++ + ++I +++V K LR Sbjct: 732 GYKSITIYCVFRAKDRTLKEEEVNKIWEKIKKDLVYKYPLKLR 774 >gi|194289388|ref|YP_002005295.1| phenylalanyl-tRNA synthetase subunit beta [Cupriavidus taiwanensis LMG 19424] gi|193223223|emb|CAQ69228.1| phenylalanine tRNA synthetase, beta-subunit [Cupriavidus taiwanensis LMG 19424] Length = 815 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 275/844 (32%), Positives = 434/844 (51%), Gaps = 71/844 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNP 56 M+F+ SWL+ + + +S + + +LT GLEVE+V PF + VLS ER+P Sbjct: 1 MQFSESWLRTFANPEKISTDALSHSLTMAGLEVEEVG--PVAPPFDKVVVAHVLSTERHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIR 110 + D + ++D G + +Q+VCGAPNVR G+ A G+ +P + V K+R Sbjct: 59 NADRLNVCQVDAGTGETLQIVCGAPNVRPGIKVPCALVGAVLPPAEDGGKPFEIKVGKLR 118 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS +EL LS+D +M LP DAPVG + YL+L D + + LTPN++DC+ Sbjct: 119 GVDSYGMLCSARELKLSEDHGGLMVLPDDAPVGQNIRQYLDLDDQVFVIKLTPNKADCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGVR 226 + G+A ++ A L ++ P + +P+ I+ L LC F+ ++GV Sbjct: 179 IHGVAREVSA-----LTGAALNLP-DMQPVPVTIQDKLPVKVSAPDLCGRFSGRIIRGVN 232 Query: 227 NNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 A P WM QRL+ G RS+SALVDI+NYV L+ G PSHVFD +I L VR GE Sbjct: 233 ARAATPLWMVQRLERSGQRSVSALVDISNYVMLELGRPSHVFDLHKIHGGLDVRWGRKGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I L+ ++ VIA + I+S+AGI+GG +TTD+ +E A W P I Sbjct: 293 QIKLLNGNTIEVDEQVGVIADEKEIESLAGIMGGDSTAVTLDTTDIYLEAAFWWPAAIQG 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS--DICIARNITYKPRK 403 + TD+ +RFERGVD + ++ I +LIL++CGG A D + KP Sbjct: 353 RSRRYNFSTDAGHRFERGVDYATTVEHIERITALILAICGGQAGPVDDHVVNLPVRKPVS 412 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKADL 459 + +E R+ GI++ + +RL E + FEV+ PS+R D+E + DL Sbjct: 413 LRVARAE--RVLGIELSPAAIADVFQRLQLPFTRTQGAEGELFEVTPPSYRFDIEIEEDL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ RIYG ++I + P P+ + E R + T V+ +A+R EV+N++F+ ++ Sbjct: 471 IEEVARIYGFERIPARP-PVAESE-MRPTNEGSRSTHVVRHAVAARDYQEVINFAFVEEK 528 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 F + + +LNPI++ ++ MR++L+ GL+ N++R A +FEV V+ D Sbjct: 529 WERDFAANDQPIRLLNPIASQLAVMRSTLIGGLVDKVRYNLNRKAARVRLFEVGRVFHRD 588 Query: 580 --------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 T G Q MAAGI G + E W + R VD FD K D ++ Sbjct: 589 AGVKDGGLTVAGYDQPMMAAGIAYGPAFEE----QWGIAT----RNVDFFDVKGDVEALF 640 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P V RFE + HPGR+ + + V G GE HP L + L++ FE+ Sbjct: 641 HPRVP----RFEPVSHPALHPGRAARVLLDGKPV-GVVGELHPRWLQEYELAHAPVLFEL 695 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK------NVDRL 743 LD++ + T +S RDLA +V Q + L++ ++ R Sbjct: 696 RLDAL-----RATGLPAYTEISKFPAAVRDLAVVVKQSVRVQDLLDAMRAALEKQGYGRF 750 Query: 744 IDDVTVFDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +FD F+ K ++G +KS+A +V +Q T +D+ + + +V+ + + Sbjct: 751 CQGLVLFDEFRPKGASTAIGADEKSLAFRVTLQDTGSTLQDETVDSAVRCMVDALTEAFQ 810 Query: 800 AVLR 803 A LR Sbjct: 811 ARLR 814 >gi|261821456|ref|YP_003259562.1| phenylalanyl-tRNA synthetase subunit beta [Pectobacterium wasabiae WPP163] gi|261605469|gb|ACX87955.1| phenylalanyl-tRNA synthetase, beta subunit [Pectobacterium wasabiae WPP163] Length = 795 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 264/821 (32%), Positives = 418/821 (50%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ V E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVDSETLSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRHGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGTDIRDYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E I P+++ +I +D C + VKG+ A P WMR++ Sbjct: 180 AVLNQLTLNEPTIE-PVAA-TIQDTFPIRVDAPQACPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNYV L+ G P H FD R++ + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLNGGIIVRMAEEGETLTLLDGNEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA ++ GI GG+H+G +D T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADQQNALAMGGIFGGEHSGVNDETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 +R+ERGVD P L+H L++ +CGG A + + P + I + Sbjct: 358 HRYERGVD-----PALQHNAIERATRLLIDICGGDAGPVVDVTSKADLPTRATITLRREK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + RL G + E IL RLG +V ++ + PSWR D+E + DLVEE+ RIYG + Sbjct: 413 LDRLIGHVIADEQVSDILRRLGCNVAKIDAGWQATAPSWRFDMEIEEDLVEEVARIYGYN 472 Query: 471 QIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 I + P PL R SL R VK +L E + +SF+ + L + Sbjct: 473 NIPNIPTQAPLIMTA-HREASLSLKR---VKTLLVDHGYQEAITYSFVDPKIQGLIHPDE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PISA+MS MR SL GLL A N +R + +FE + DT Q Sbjct: 529 ASLSLPSPISAEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFVPDTSADLGIRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M AG+ G+ + + + + VD +D K D +V+ + F + Sbjct: 589 DLMLAGVMTGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKFSEVEFRAEN 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I E + G+ G HP + L+ FE+ D + Sbjct: 641 NPALHPGQSAAIYLCGERI-GFIGVIHPELERKLDLNGRTVVFELLWDKV-----ADRVL 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGK 762 +S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + EG Sbjct: 695 PDANEISRFPANRRDIAVVVAENVPAGDILAECKKVGANQLV-GVNLFDVYRGKGVAEGY 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI + +Q T +++I + V + ++ A LR Sbjct: 754 KSLAISLTLQDTTRTLAEEEIAATVAECVAALKQRFQASLR 794 >gi|50086054|ref|YP_047564.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter sp. ADP1] gi|66773906|sp|Q6F873|SYFB_ACIAD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49532030|emb|CAG69742.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter sp. ADP1] Length = 793 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 265/824 (32%), Positives = 420/824 (50%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + SWL+ ++ + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISESWLRTWVNPAIDSTTLADQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPN+RVG+ A G+ +P + K+RGIES G Sbjct: 59 ADRLRVTTVNIGNGEPLQIVCGAPNLRVGMKAPVATIGAVLP-GEFKIKKGKLRGIESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D IID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPEDAPVGLNIREYLKLDDNIIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNW 233 DL L ++ ++ P + E+ E K ++ + +K V P W Sbjct: 178 DLAV-----LNQLEVTPPDIQAVEATLNEQKQVHLETEGAPRYLGRIIKNVNVKATTPEW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M Q L A G+R+ S LVD+TNYV ++ G P H FD ++++ + VR+A + EK+ L++Q Sbjct: 233 MAQALAASGIRTHSILVDVTNYVLMELGQPMHAFDLAKLNGAIHVRQASAQEKLTLLNDQ 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +L+ D +VIA D ++ +IAGI+GG + D+T D+ +E A + P+ IA + G+ Sbjct: 293 NVELNEDIMVIADDAKVLAIAGIMGGLESSVTDDTQDIFLESAFFAPLAIAGRARRFGLH 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEV 411 TDS RFERGVD + + + LI GG I +A N P++ I +V Sbjct: 353 TDSSQRFERGVDFELPLLAMNRASQLIQQFAGGEFGPITVAENTALLPKREAIELNQQQV 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +L G +V + L RLG V + ++ V PS R D+ DL+EE+ RI+G D Sbjct: 413 SQLLGYEVETDFIADALTRLGCQVAVKAQGEWVVVAPSHRFDITIYQDLIEEVARIHGYD 472 Query: 471 --QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 QI+ + + + + +L L Q R + +A+ E +++SF + Sbjct: 473 NIQIRLPKIDVKLAKYQDHLELGQLR-----QTIATLGYQEAISFSFADLKLEKQLNPDV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 L + NPIS+D++ MR++LL L+ N++R FE+ ++ Sbjct: 528 NPLALANPISSDLAVMRSTLLSSLIPCVQHNLNRQQNRVRFFELGLRFDYQNAASIHDLQ 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 Q A I GSS E W K++ +D FD K D ++ V ++ +R E Sbjct: 588 QTPTLALIAVGSSVPEQ----WHGKTQP----MDFFDLKHDIEQILAAGRVKVEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +W HPG+S I + + + GY G HP++ + L + LD I Q + Sbjct: 640 ---AWLHPGQSAEILIAGQSI-GYLGRLHPSLENDLDLG---VTWVAELDQQAILQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 LS V+RD+A ++ I + +IK L+D +FDV+ G+ + EG Sbjct: 690 YVSNFTELSRFPSVRRDIALLISDKINVSDIQQLIKQTGGDLLDSTWLFDVYTGQGVEEG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I+E + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIEVLENTYQATLRAS 793 >gi|300703883|ref|YP_003745485.1| phenylalanine tRNA synthetase, beta-subunit [Ralstonia solanacearum CFBP2957] gi|299071546|emb|CBJ42870.1| phenylalanine tRNA synthetase, beta-subunit [Ralstonia solanacearum CFBP2957] Length = 809 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 273/839 (32%), Positives = 426/839 (50%), Gaps = 65/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE+VD S + V+ + R+PD D Sbjct: 1 MQFPESWLRSFVNPPITTAELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVELNRHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + V K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCALVGAELPPGD--DGKPFKIKVGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS++ A ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEEHAGLLILPEDTPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIY 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ S+ +P+++ + LC F+ ++GV Sbjct: 179 GVARE-VSALTGAPITLPSMAPVAVTLSDKLPVKV----EAPDLCGRFSGRIIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVARIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGQPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VIA + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTIAVDEKVGVIADEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVF 406 TD+ +RFERGVD + ++ I +LIL +CGG A I I T P ++ Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISALILEICGGQAGPIDDHIVNLPTRAPVRMRV 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + R+ GI + + RLG + E D F V PS+R D+E + DL+EE+ RI Sbjct: 414 --ARAARVLGIALTNATVSDVFTRLGLAFRVEGDNFIVDPPSYRFDLEIEEDLIEEVARI 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG +QI ++P P+ E + + RT + V+ +A+R EVVN++F+ E F Sbjct: 472 YGFEQIPAKP-PVA--ESAMRPTDEARRTMHDVRHAVAARDYNEVVNFAFVETEWEADFA 528 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP---- 581 G + + +LNPI++ S MR++LL GLL N++R + +FEV V+ D Sbjct: 529 GNTQPIALLNPIASQYSVMRSTLLGGLLDKVRYNLNRKASRVRLFEVGRVFRRDAEVADG 588 Query: 582 ------EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 Q A GI GS+ E G + R VD FD K D S++ P + Sbjct: 589 GLSVAGYAQPMRAGGIAYGSATEEQWG--------VQARAVDFFDVKGDVESLLWPLQA- 639 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 RFE HPGRS + +G+ GE HP L + L + +E+ LD+ Sbjct: 640 ---RFERAEHPALHPGRSARVVLDGR-AIGWIGELHPRWLQKYDLPSAPVAWELDLDA-- 693 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTV 749 I+ ++V + + V RD+A +V Q + LV++ R + V + Sbjct: 694 ITAVGLPAYREVPRVPA---VTRDIALVVRQDVAVQDLVDVFGKAALGMPWQRYLQGVVL 750 Query: 750 FDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD F+ K ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 751 FDEFRPKAATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLRA 809 >gi|258515607|ref|YP_003191829.1| phenylalanyl-tRNA synthetase subunit beta [Desulfotomaculum acetoxidans DSM 771] gi|257779312|gb|ACV63206.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfotomaculum acetoxidans DSM 771] Length = 804 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 434/827 (52%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLK+++D D+ +++ D LT G+ VEKV+ E + K+L ++++P+ D Sbjct: 1 MLVSYNWLKEYVDIDIPPQELADRLTLAGVAVEKVEYLGEGIEKVYTGKILKIDKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ T + +Q+V GA NVR G + + G+ + + + K+RG+ES GM+C Sbjct: 61 KLVVCSITTGSETLQIVTGATNVREGHIVPVSVVGASLA-GGLKIKKSKLRGVESYGMLC 119 Query: 120 SEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL + + +M LP D P+G + L L+D I+++ LTPNR DC+ + G Sbjct: 120 SGQELGMDAKFLPPEQQTGVMILPEDTPIGVDAKEVLGLNDTILELDLTPNRGDCLSMIG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA LG + + P+ E +I + + D+ SLC+ +A + V+ + Sbjct: 180 VARE-VAAMLGY--TLRVPQPVVQELPDAIAGKARVDIAAPSLCRRYAARVLVNVKIGSS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P WM+QRL+A G+R IS +VD+TNYV L+ G P H FD + + + VRRA +GE I+ Sbjct: 237 PGWMQQRLRAAGVRPISNIVDVTNYVMLELGQPMHAFDYDTLENHHIIVRRAAAGESIMT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + L D +VIA ++AG++GG NT VL+E A ++PI++ R+ K Sbjct: 297 LDGSQRKLEQDMLVIADTTGAIAVAGVMGGLRTEVTGNTVAVLLESAQFNPISVRRTSKE 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-----RKI 404 LG+ ++S RFE+G+DL G + L+ + A+D+ +A ++ P + + Sbjct: 357 LGLRSESSLRFEKGIDLDGCLRAADRACQLMQEM---GAADV-LAGSVDNYPEVLLEKTV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + V R+ G++VP E + +L L F+V D+ V+VPS R DV +ADL+EE+ Sbjct: 413 LLRTGRVSRILGVEVPKEQIVAVLSSLDFNVRDNGDELLVTVPSHRNDVSIEADLIEEVA 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 R+YG ++I P L Q ++ R +Q TR +K LA+ + EV+ +SF++ Sbjct: 473 RMYGYNRI---PATLMQGDNTRGAKTPVQLIETR-LKDTLAACGLTEVITYSFVNPHVFD 528 Query: 523 LFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 G + R +++ NP+S D S MRT+LLP LL+ RN +R + + A+FE + Sbjct: 529 ALGLAEDNDLRRAVKVKNPLSEDQSVMRTTLLPNLLEVLQRNYNRRVQNGAVFETGRCF- 587 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 P ++ G++ + W+ + +D + K L + + L Sbjct: 588 --LPTDRQLPDEIPVLGAAAMGNQASAWNKPAVP----MDFYYLKG-VLEAMFDTIGLSG 640 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + F + YHPGR+ +I+ + G GE HP++L+ + L + E+ L + + Sbjct: 641 IAFVTSEAPGYHPGRTAVIQLDGRQI-GVLGEVHPDVLENYDLPERVTACEINLTEVFML 699 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 K KK L V RDLA +V Q + L ++I N +L+ V +FDV++G Sbjct: 700 AG---KIKKYQALPRYPGVDRDLAVVVKQSLAVEALFHVIHNTGGKLLRSVKLFDVYRGG 756 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EG +S+A + +Q T D +I M+ I + K+ A LR Sbjct: 757 QVKEGYQSLAFALNLQAEDHTLTDAEINETMENIRGALEKELGAELR 803 >gi|117617875|ref|YP_856845.1| phenylalanyl-tRNA synthetase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559282|gb|ABK36230.1| phenylalanyl-tRNA synthetase, beta subunit [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 798 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 268/828 (32%), Positives = 431/828 (52%), Gaps = 56/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SW+ + + T++S + + +T GLEV+ V+ + + +V+ ++ D D Sbjct: 1 MKFSKSWVMEWVRTELSDNALAEQITMAGLEVDAVEAVAGQFNNVVVGEVVECAQHLDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGD-ELLDIVCGAPNCRAGLKVCVAKVGATLP-GDFTIKKAKLRGQPSHGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + D+ I+ELP+DAP+G + +YL L+D IDV LTPNR+DC+G+ G+A ++ Sbjct: 119 CSFSELGIDVDADGIIELPLDAPIGTDIREYLALNDVSIDVDLTPNRADCLGIAGLAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESI-------PLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 G L +++ P + ++ P+ ++ D C + +KG+ + + Sbjct: 179 -----GVLNSVDVVEPTWAPAVATIDATFPIRVEAPAD----CPRYLGRVIKGLNLHAQS 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+++L+ G+RSI A+VDITNY+ L+ G P H FD + + L VRRA + E + L Sbjct: 230 PLWMQEKLRRGGIRSIDAIVDITNYLLLEYGQPMHAFDLATLEGELVVRRAKADEPMTLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E L +VIA +AGI GG G + TTD+L+E A + P++I + Sbjct: 290 DGNEVKLKETTLVIADAKGPACMAGIFGGDRTGVSETTTDILLECAFFAPLSITGRARAY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD----ICIARNITYKPRK--I 404 G+ TDS +RFERGVD + V+ L+L +CGG + ++ + P+ I Sbjct: 350 GLHTDSSHRFERGVDPELQAKVMDRATRLLLDICGGECGGEAGPVIEVKSDAHLPKAAPI 409 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +++ ++ GI V + IL RLG V E D + PSWR D+ + DL+EE+ Sbjct: 410 KLRRAKLDKVIGISVADAQVVEILTRLGMQVTVEADGWTALAPSWRFDIAIEEDLIEEVA 469 Query: 465 RIYGVDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQS 521 RIYG + I + L VE Q + V+ +L R E + +SF+ K Q Sbjct: 470 RIYGYNNIPNLKPAASLAMVEQAEG----QVTLKRVRDLLVDRGFQEAITYSFVDPKAQQ 525 Query: 522 VLFGGGQRELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYEN 578 LF Q + +L NPIS +MS MR SL PGL++A N +R +FE + + + Sbjct: 526 TLF--PQSDAIVLPNPISVEMSAMRVSLFPGLVQAVVYNQNRQQPRVRLFEQGLRFIKDE 583 Query: 579 DTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + G Q+ M AGI G+ S W KS R D FD K D +V++ Sbjct: 584 NAENGIRQEPMLAGIITGNQ----SDEHWDIKS----RAADFFDLKGDLEAVLDLTAEGA 635 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + FE S HPG+S I + +V+G+ G HP++ GL + FE+ LD++ Sbjct: 636 TFTFERAEHSALHPGQSAAILRNG-VVIGHIGVIHPSLEKKLGLKSRAVMFELELDNL-- 692 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 K +S +RD+A +VD+ + AG ++ +IK V + + +FDV+QG Sbjct: 693 ---TPAKVPVAAEVSKFPANRRDIAVVVDRQVLAGDVLAVIKKVGGNQVVGINLFDVYQG 749 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + E KKS+AI +++Q + T + +I +D +V + ++ NA LR Sbjct: 750 AGMAEDKKSLAISLVLQDTQRTLEEKEIAETVDNVVRALGEELNASLR 797 >gi|149926882|ref|ZP_01915141.1| phenylalanyl-tRNA synthetase beta subunit [Limnobacter sp. MED105] gi|149824434|gb|EDM83652.1| phenylalanyl-tRNA synthetase beta subunit [Limnobacter sp. MED105] Length = 810 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 266/837 (31%), Positives = 437/837 (52%), Gaps = 61/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERNP 56 M+FT SWLK ++T ++ +++ D LT GLEVE++ E L+P + V+ +++P Sbjct: 1 MQFTESWLKSLVNTPLNTQELGDKLTMAGLEVEEL---EPLAPEFSGVVVGLVVKKDKHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D D ++ ++ G+ Q+VCGAPNV GL A PG+ +P + K+RG+ES Sbjct: 58 DADRLSVCQVQVGEGDVRQIVCGAPNVAEGLKVPCALPGAELP-GGFKIKPTKMRGVESG 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS KEL + D + L D PVGG + + L L++ + +TPNR+DC+ V G+A Sbjct: 117 GMLCSGKELGVPSDVDGLHILNTDFPVGGNVRELLGLNEMKFTLKMTPNRADCLSVWGVA 176 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 + VAA G P+++ +I +K +++++ LC FA ++GV NN P WM Sbjct: 177 RE-VAALTGATLNAPSFAPVAA-TIGDTLKVNVENTDLCGRFAGRVIRGVNNNAKTPQWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 RL+ G RS++ALVDI+NYV L+ G PSHVFD ++ LTVR A GEK+ L++ E Sbjct: 235 VDRLEGAGQRSLNALVDISNYVMLELGRPSHVFDLDKVQGDLTVRWAREGEKLKLLNDME 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P VI +++AGI+GG H ++ TT++ VE A W P I + + Sbjct: 295 VALKPHMGVICDANGPEALAGIMGGDHTAVNEGTTNIFVEAAFWHPDAIVGRAREFNFSS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVKR 413 D+ +RFERGVD Q + ++ I +LIL +CGG A + + + ++ RK V ++ + Sbjct: 355 DASHRFERGVDFQTIPEHIERITALILEICGGQAGPV-LDQVLSLPARKPVKLRHARAEM 413 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G+ +E + +LGF E + V+ PS+R D+ + DL+EE++R+ G Sbjct: 414 VIGMPFTVEQVKGVFSKLGFQFSAEGQGTDTCYVVNPPSYRFDINIEEDLIEEVIRVVGY 473 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + PL + + K + + R+ ++R +A+ EVV++SF ++ F Sbjct: 474 DSL---PLRAPRGKLKMLPAAEGKIGRHAIRRQVAALGYQEVVSYSFTPEQWEADFNANT 530 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + +LNPI++ +S MR++L+ L N+ + +FEV+ V+E D Sbjct: 531 NPVRLLNPIASHLSVMRSTLIGSLTGVLKHNLGHRVDRLRVFEVARVFEKDDK------- 583 Query: 589 AGIRKGSSGIEGSGRLW---------SDK---SEERCRFVDLFDAKADALSVIEPFVSLD 636 ++ G+ + G + W +D+ + R +D FD K D ++ +D Sbjct: 584 --VQDGAQTVAGFKQTWKVGGLAYGLADQLQWAAGNNRALDFFDVKGDVEQLLHG-RKVD 640 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 F++ P HPGRS + + + + G+ GE HP + + L FE+ LD Sbjct: 641 FEAFDAANPLPALHPGRSARVLVNKQPI-GFIGELHPKLAQEYDLPQAPIVFELLLDG-- 697 Query: 696 ISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV--DRL--IDDVTVF 750 ++ +K K V S P V RDLAF+V+Q I A L V D L + V +F Sbjct: 698 LNTRKLPAFKDV----SKQPVVVRDLAFVVEQSIAAAQLKKAFTEVKDDNLAWLKSVILF 753 Query: 751 DVF----QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D F +GK L +KS+A ++ +Q + D DI L+ ++++ ++ A LR Sbjct: 754 DEFVPKEEGKGLNLNEKSLAFRLTLQASDRSLTDADIEPLLKKMIDQAGQRCAARLR 810 >gi|78048346|ref|YP_364521.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|91208147|sp|Q3BRU2|SYFB_XANC5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78036776|emb|CAJ24469.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 792 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 247/786 (31%), Positives = 415/786 (52%), Gaps = 40/786 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELAATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEIN--ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 AA ++ + + P+S+ ++ +E+ D C ++G+ + P W+ Sbjct: 179 AAACASEVVAFDAGMVAPVSTRTLAVELDAGKDAPRYCG----RVIEGIDPSAKTPVWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+R +S LVDIT YV L+ G P H FD + + VR + GE+++ LD ++ Sbjct: 235 ERLRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLQGPIGVRHSRVGEQLVLLDGRQV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L + I GR ++AG++GG D T +V +E A + P I G+ LG+ TD Sbjct: 295 TLDESFLTITDAGRPVALAGLMGGLDTRVTDTTRNVFLESAYFAPEAIMGRGRKLGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKR 413 + +RFERGVD ++ L+L L GGT + A+ + +P +I + + R Sbjct: 355 AGHRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPQPARIRLRRARIAR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + GI + D +R+L LG V + +EV PS R D+ + DL+EE+ RI+G D++ Sbjct: 415 VLGIQIDDADVVRMLRALGMHVEAVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDRVP 474 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P +++ L + V+R L +R + E +N++F+ + + + Sbjct: 475 TTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTEGLVP 531 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKYM 587 + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P +++ Sbjct: 532 LANPLSAELAIMRLRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAADAGAAPGESQHV 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D +++ S L F+ + Sbjct: 592 AAAVCGDALALQ-----WG----EPARKVDFHDLKGDLMALAA--ASGAQLEFQPSTQPF 640 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + + +G+ G+ HP + + + FE+ L +P+ Q+ + + Sbjct: 641 GHPGRSADIYRNG-VCIGWIGQVHPRLAKALDIDVDVIAFELQL--MPLVQRALPRAGE- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G KS+A Sbjct: 697 --LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKSLA 754 Query: 767 IQVLIQ 772 + +++Q Sbjct: 755 MGLILQ 760 >gi|261492545|ref|ZP_05989098.1| phenylalanine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261311704|gb|EEY12854.1| phenylalanine--tRNA ligase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 795 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 265/826 (32%), Positives = 434/826 (52%), Gaps = 55/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF SWL++ ++ +S E++CD +T +GLEV+ V+ A S + +V+ ++PD D Sbjct: 1 MKFNESWLREWVNPAISTEQLCDQITMLGLEVDDVEPVAGAFSGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVACAVEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D + I+ELP DAP+G +YL L+D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSYSELGIKEDHSGIIELPADAPIGQDFREYLNLNDVAIEISLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 G + +++ P ++ +I ++ +L C + VK V +P W+ Sbjct: 180 -----GVINRVDVKAPTITDVKATISDKVSVELQAPEACPRYLARVVKNVNVKATSPLWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITN L+ G P H FDA++I + VR A GE+++ LD Sbjct: 235 QEKLRRCGIRSIDPIVDITNLSLLELGQPMHAFDAAKIEGGIQVRMAKEGEELVLLDGTN 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + +VIA ++AGI GG+ +G +NT DV++E A + + I + G+ T Sbjct: 295 AKLQSNTLVIADSKGALAMAGIFGGEASGVSENTKDVVLESAFFASLAITGRARQYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +RFERGVD + ++ +L+L +CGG AS+I A + P++ + S++ Sbjct: 355 DASHRFERGVDPELTRQAMERATALLLEICGGEASEIVEAVSQENLPKRNTVTLRRSKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + IL RLG +V + + PSWR D+E + DL+EEI RIYG + I Sbjct: 415 SVIGHHIDDATVTDILTRLGLNVTFADNSWTAIAPSWRFDIEIEEDLIEEIARIYGYNSI 474 Query: 473 -KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + PL ++ L+ +R R L EV+ +SF+ ++ L Q L Sbjct: 475 PNNSPLAHLTMKGTPEKLLEANRIRM---ALVDSDYQEVITYSFVDPKKQSLLHPQQEAL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NPIS++MS MR SLL GLL N R IFE + D+ +G+ Sbjct: 532 ILPNPISSEMSAMRVSLLTGLLDTIVYNQSRQQNRVRIFEAGLRFIPDS-----NAESGV 586 Query: 592 RKG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR----FES 642 R+ + I G R W +KSE D FD K D IE +SL ++R F + Sbjct: 587 RQEFVFGAAIVGDKRPVHWENKSEA----ADFFDLKGD----IERILSLTAIRHDLQFVA 638 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQK 699 HPG+S I + + G+ G HP+I+ FG+ E+ +I P++Q Sbjct: 639 KQFPALHPGQSAAIMLDGKEI-GFIGTVHPSIVQKFGIKGKPIVCEILASAIAERPVTQA 697 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKS 757 +S RD+A +VD+ +PAG ++ + ++L+ V +FDV++G + Sbjct: 698 G--------EISKFPANNRDIAVVVDESVPAGEVLEACRKAGGNKLV-AVNLFDVYRGSN 748 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS+AI + +Q + T +++I ++ ++ + + NAVLR Sbjct: 749 LESGKKSLAISLTVQDNEKTLEENEINAVIQAVLAELATRFNAVLR 794 >gi|241663238|ref|YP_002981598.1| phenylalanyl-tRNA synthetase subunit beta [Ralstonia pickettii 12D] gi|240865265|gb|ACS62926.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12D] Length = 809 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 269/838 (32%), Positives = 434/838 (51%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ +++ LT GLEVE+VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPSITTDELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCALVGADLPPGE--DGKPFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEDHGGLLILPEDTPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ ++ +P+++ + LC F+ ++GV + Sbjct: 179 GVARE-VSALTGAPITVPSMAPVAVTLADKLPVKV----EAPDLCGRFSGRIIRGVNAHA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR +GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKAGEQMK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTITVDEKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPEAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I +LIL +CGG A I + + R+ V M Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISALILEICGGQAGPID-DQIVNLPKREPVRMR 412 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ GI + + + +RLG + + D F V PS+R D+E + DL+EE+ RIY Sbjct: 413 VARAARVLGIPLSHDVVEDVFKRLGLTFSVDGDVFIVEPPSYRFDLEIEEDLIEEVARIY 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I ++P P+ E+ + + RT + V+ +A+R EVVN++F+ E F G Sbjct: 473 GFERIPAKP-PVA--ENAMRPTDEAHRTMHDVRHAVAARDYHEVVNFAFVETEWEADFAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP----- 581 + +LNPI++ S MR++L+ GLL N++R + +FEV V+ D Sbjct: 530 NTNPIPLLNPIASQYSVMRSTLIGGLLDKVRYNLNRKASRVRMFEVGRVFHRDATVADGG 589 Query: 582 -----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 Q MA GI G + E G + R VD FD K D S++ P + Sbjct: 590 LSIAGYAQPMMAGGIAYGPAKEEQWG--------VQTRPVDFFDVKGDVESLLWPLQA-- 639 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 RFE HPGRS + + +G+ GE HP L + L +E+ LD+ I Sbjct: 640 --RFERAEHPALHPGRSARVVLNGR-AIGWIGELHPRWLQKYDLPTAPVVWELELDA--I 694 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVF 750 + K ++V + + V RD+A +V Q + LV+I + +R + V +F Sbjct: 695 TAVGLPKYREVPRVPA---VTRDIALVVRQDVAVQDLVDIFEKTAVGTPWERYLQGVVLF 751 Query: 751 DVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D F+ K ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 752 DEFRPKAATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLRA 809 >gi|94310110|ref|YP_583320.1| phenylalanyl-tRNA synthetase subunit beta [Cupriavidus metallidurans CH34] gi|93353962|gb|ABF08051.1| phenylalanine tRNA synthetase, beta subunit [Cupriavidus metallidurans CH34] Length = 815 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 269/843 (31%), Positives = 442/843 (52%), Gaps = 67/843 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNP 56 M+F+ SWL+ + + +S + + +LT GLEVE+V PFT + +VL+ ER+P Sbjct: 1 MQFSESWLRTFANPEKISTDALSHSLTMAGLEVEEVG--PVAPPFTKIVVARVLATERHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIR 110 + D + ++D G + +Q+VCGAPNV G++ A G+ +P + V K+R Sbjct: 59 NADRLNVCQVDAGTGETLQIVCGAPNVTPGIVVPCALVGAVLPPGEEGGKPFEIKVGKLR 118 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS +EL LS+D ++ LP DAPVG + YL+L D + + LTPN++DC+ Sbjct: 119 GVDSFGMLCSARELKLSEDHGGLLVLPDDAPVGQDIRQYLDLDDQVFTIKLTPNKADCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSS--LCKGFAMCCVKGVRN 227 + G+A ++ A L ++ P +S ++ ++ K + SS LC F+ ++GV Sbjct: 179 IHGVAREVSA-----LTGAALTLPDMSPVAVTIQDKLPVKISSPDLCGRFSGRIIRGVNA 233 Query: 228 NVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 A P WM QRL+ G RSISALVDI+NYV L+ G PSHVFD +I L VR GE+ Sbjct: 234 RAATPAWMVQRLERSGQRSISALVDISNYVMLELGRPSHVFDLDKIHGGLDVRWGRKGEQ 293 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ ++ VI+ D I+S+AGI+GG +TT++ +E A W P I Sbjct: 294 LKLLNGNTVEVDEQVGVISDDKEIESLAGIMGGDSTAVSLDTTNIYLEAAFWWPNAIQGR 353 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + TD+ +RFERGVD + ++ I +LIL +CGG A + + + R+ V Sbjct: 354 ARRYNFSTDAAHRFERGVDYATTVEHIERITALILDICGGQAGPVD-DQTVNVPQRQPVK 412 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKADLVE 461 + + +R+ GI++ + + +RL S E + FEV+ PS+R D+E + DL+E Sbjct: 413 LRVARAERVLGIELSSAEIADVFQRLNLSFTRSQGDEGEVFEVTPPSYRFDIEIEEDLIE 472 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+ RIYG ++I + P P+ + E + ++S+ V+ LA+R EV+N++F+ ++ Sbjct: 473 EVARIYGFERIPARP-PVAESEMRPTNEGRRSQ-HVVRHALAARDFNEVINFAFVEEQWE 530 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-- 579 F + +LNPI++ ++ MR++++ GLL N++R + +FEV V+ D Sbjct: 531 QDFADNNNPIRLLNPIASQLAVMRSTMIGGLLDKVRYNLNRKASRVRLFEVGRVFHRDPK 590 Query: 580 ------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 T G Q MAAGI G + E G R VD FD K D ++ P Sbjct: 591 VVDGGLTVAGYHQPMMAAGIAYGPAFDEQWGVA--------TRPVDFFDIKGDVEALFHP 642 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 V RFE A HPGR+ + + V G GE HP L + L+ FE+ L Sbjct: 643 RVP----RFEPVAHPALHPGRAARVIVDGKAV-GVVGELHPRWLQKYELTQAPVLFELEL 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK------NVDRLID 745 D++ + +S RDLA +V Q + A +++ ++ + Sbjct: 698 DAL-----RGVGLPVYTEISKFPAAVRDLAVVVKQSLRAQDMLDAMRAALDKGGFGHFVQ 752 Query: 746 DVTVFDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + +FD F+ K ++G +KS+A +V +Q T +D+ + + +++ + +A Sbjct: 753 SLVLFDEFRPKAASAAIGADEKSLAFRVTLQDTGSTLQDETVDSAVRCMIDALTAGFDAR 812 Query: 802 LRS 804 LR+ Sbjct: 813 LRA 815 >gi|309782532|ref|ZP_07677255.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] gi|308918623|gb|EFP64297.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia sp. 5_7_47FAA] Length = 809 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 268/838 (31%), Positives = 434/838 (51%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ +++ LT GLEVE+VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPSITTDELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCALVGADLPPGE--DGKPFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEDHGGLLILPEDTPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ ++ +P+++ + LC F+ ++GV + Sbjct: 179 GVARE-VSALTGAPITVPSMAPVAVTLADKLPVKV----EAPDLCGRFSGRIIRGVNAHA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR +GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKAGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTITVDEKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPEAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I +LIL +CGG A I + + R+ V M Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISALILEICGGQAGPID-DQIVNLPKREPVRMR 412 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ GI + + + +RLG + + D F V PS+R D+E + DL+EE+ RIY Sbjct: 413 VARAARVLGIPLSHDVVADVFKRLGLTFSVDGDVFIVEPPSYRFDLEIEEDLIEEVARIY 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I ++P P+ E+ + + RT + V+ +A+R EVVN++F+ E F G Sbjct: 473 GFERIPAKP-PVA--ENAMRPTDEAHRTMHDVRHAVAARDYHEVVNFAFVEAEWEADFAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP----- 581 + +LNPI++ S MR++L+ GLL N++R + +FEV V+ D Sbjct: 530 NTNPIPLLNPIASQYSVMRSTLIGGLLDKVRYNLNRKASRVRMFEVGRVFHRDATVADGG 589 Query: 582 -----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 Q MA GI G + E G + R VD FD K D S++ P + Sbjct: 590 LSIAGYAQPMMAGGISYGPAKEEQWG--------VQTRPVDFFDVKGDVESLLWPLQA-- 639 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 RFE HPGRS + + +G+ GE HP L + + +E+ LD+ I Sbjct: 640 --RFERAEHPALHPGRSARVVLNGR-AIGWIGELHPRWLQKYDVPTAPVVWELELDA--I 694 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVF 750 + K ++V + + V RD+A +V Q + LV+I + +R + V +F Sbjct: 695 TAVGLPKYREVPRVPA---VTRDIALVVRQDVAVQDLVDIFEKTAVGTPWERYLQGVVLF 751 Query: 751 DVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D F+ K ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 752 DEFRPKAATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLRA 809 >gi|152996605|ref|YP_001341440.1| phenylalanyl-tRNA synthetase subunit beta [Marinomonas sp. MWYL1] gi|150837529|gb|ABR71505.1| phenylalanyl-tRNA synthetase, beta subunit [Marinomonas sp. MWYL1] Length = 794 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 266/820 (32%), Positives = 428/820 (52%), Gaps = 44/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WL++ ++ D+S + + +T GLEV++V S + ++L E +P+ D Sbjct: 1 MKISENWLREWVNPDISSDDLVAQITLAGLEVDEVLPVASEFSGVVVGEILGAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPN R G+ +A G+ + + I K+R +ES GM+ Sbjct: 61 KLQVCQVSDGV-ETFQVVCGAPNARPGIKIPFAKIGAVLGADFKIKKA-KLRQVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LSDD IMELP + G +L L D IIDV LTPNRSDC+ + G+A ++ Sbjct: 119 CSASELGLSDDHDGIMELPANVKTGEDFRAFLGLDDQIIDVDLTPNRSDCLSIAGLAREV 178 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDL--DDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++++ +++ ++ ++ F + D + C + V+GV P WM Sbjct: 179 -----GVLNKVDVTPVEVTAANVAIDDVFPVRVDAADACPRYLGRVVRGVDVTAQTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++L+ G+RSI +VDITNYV L+ G P H FD + +S + VR A GEKI+ LD QE Sbjct: 234 VEKLRRSGVRSIDPIVDITNYVMLELGQPMHAFDLANLSGSIVVRMASQGEKIVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA + +IAG++GG+ +G +D T D+ +E A + P+++A ++ G+ T Sbjct: 294 ITLRDDTLVIADEKAPLAIAGVMGGEGSGVNDKTQDIFLESAFFTPLSLAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS +RFERGVD ++ +L++ + GG I A N + K Sbjct: 354 DSSHRFERGVDATLQERAIERATALVVEIAGGQVGPITHAVNEASLSEAALVTLRRKKLD 413 Query: 415 SGIDVPIEDSL--RILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + + I+ L IL RLG ++ D+ + PS R D+ +ADL+EE+ RIYG D Sbjct: 414 QYLAMSIDKDLVTDILTRLGLEMVEVTDEAWMTKAPSHRFDIAIEADLIEEVARIYGYDN 473 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + S +P V + LS +++ + ++ +L S+ E V +SFI S F + Sbjct: 474 LPSS-MPQAAV-NFTPLSESKTQIQVLRSILVSQGYQEAVTYSFIDPVLSKQFLPNIEPV 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYM 587 + NPISADM MR SL+PGL+KA N +R + +FE + E Q+ Sbjct: 532 PLANPISADMGVMRPSLVPGLVKAYLYNQNRQQSRVRLFETGRRFIGSVEALAELDQQQQ 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD---SLRFESGA 644 AG+ GS E W SE+ VD +D KA +E +L+ +E + Sbjct: 592 IAGLIAGSRHPEA----WYHGSEK----VDFYDLKAH----VEALFALNDGGKPTYERSS 639 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGRS I + V G GE HP + G++ PI F++ L+++ Sbjct: 640 CEFLHPGRSADIFLDGQFV-GLIGELHPQLSKTLGVNQPIYVFDIALNAV-----LNATL 693 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 + +S V+RDLA +VD+ +P L +I + +V VFDV+QG+ + + KK Sbjct: 694 PEYEAVSRFPEVRRDLALLVDRSVPVSELERVISAAAGDALKNVLVFDVYQGQGIDDTKK 753 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SVA+ + Q T D+++ +++ V + ++ AV+R Sbjct: 754 SVALGLTWQHPSHTLSDEEVNNSVEQTVAALSEQLGAVVR 793 >gi|93007122|ref|YP_581559.1| phenylalanyl-tRNA synthetase, beta subunit [Psychrobacter cryohalolentis K5] gi|92394800|gb|ABE76075.1| phenylalanyl-tRNA synthetase beta subunit [Psychrobacter cryohalolentis K5] Length = 801 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 261/831 (31%), Positives = 429/831 (51%), Gaps = 56/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 MK + WL+ ++ + S E++ + LT GLE++ + A S + +V+SVE++PD D Sbjct: 1 MKISEQWLRQWVNPNNSSEQLAEQLTMAGLEIDDRFAVARAFSGVVVGEVISVEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 + +++ G + +Q+VCGAPNV +G+ A G+ +P ++ + +RG++S Sbjct: 61 KLRVTQVNIGAAEPLQIVCGAPNVTIGMKVPVATVGAVLPSDDKKGFTIKNGNLRGVDSN 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C E+ L+D ++ELP DAP+G + +YL L + I+D+S+TPNR DC VRGIA Sbjct: 121 GMLCGASEIDLTDSIDGLLELPADAPIGMDIREYLGLDNQILDISITPNRGDCFSVRGIA 180 Query: 176 LDLVAAGLGKLKEINI--SCPLSSESIPLEIKFDLDDS---------SLCKGFAMCCVKG 224 +EI++ PL +IP I F ++ C + + + Sbjct: 181 -----------REISVINDLPLQMPNIPDNIDFTQNEVMPAVTVSAVEACPRYLLQSISN 229 Query: 225 VRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + ++ P WM+ L GLRS + LVD+TNYV ++ G P H FDA I + VR A S Sbjct: 230 IDRSIDTPKWMQDALVQSGLRSHNFLVDVTNYVLMELGQPLHAFDADTIKGDIVVRLAQS 289 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 E I L+ Q L+ D +VIA D ++AGI+GG+ + D+TT++++E A ++P+ I Sbjct: 290 EETITLLNEQTITLTGDELVIADDKGALALAGIMGGQRSSVTDSTTNIVLESAFFNPLAI 349 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 A + G+ TD+ RFERGVD + L V LI S+ A I + + P + Sbjct: 350 AARARRFGLHTDASQRFERGVDFELPALALARAVDLITSVTNSQAGQIITVESSKHLPAR 409 Query: 404 --IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 I ++V+ + GI++ +RIL +LGF V + D PS+R D+ K DL+E Sbjct: 410 APITLPITKVRDVIGIEIEPAVMVRILTQLGFKVEQQADSLICMPPSYRFDMSIKEDLIE 469 Query: 462 EILRIYGVDQIKSEPLPLTQV----EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI- 516 EI RIYG D I S LP QV +D +L T +K L ME +++SF Sbjct: 470 EIARIYGYDNIPSV-LPHLQVSMDYDDTADL------THEMKLSLVDNGYMEAISFSFSD 522 Query: 517 SKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +K +++L E L + NPIS+D++ MR +LL LL N++R FE Sbjct: 523 AKIEALLDDEALGEVLALANPISSDLAVMRRTLLSSLLPCVQYNLNRQQPRVRFFETGLS 582 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + GQ ++ ++ S + G +W D+ + R +D +D K D ++ + Sbjct: 583 F-----VGQS-ISELVQTPSIALVAVGDIW-DEQAYQNRALDFYDLKHDIEQLLPAQMDS 635 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 +R+E ++ HPG+S + + V G+ G+ HPN L + L P Sbjct: 636 ARIRYERSELAFLHPGQSAKLYIDDQYV-GWLGQLHPNTAKQLDLP---ATWVAQLSLAP 691 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 + R + + S V+RD+A +VD I TL + I+ L+ D+ +FDV+Q Sbjct: 692 LLTLAREQ-HAITTPSKFPQVRRDIAILVDSDISLQTLESTIRKASGALLTDLWLFDVYQ 750 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 G+ + G++S+A ++ Q T DD ++ + D++V+ + + +A LR S Sbjct: 751 GEKVPAGQRSLAFALIWQDKMQTLSDDAVKTVTDKVVQALTVEHSAQLRDS 801 >gi|50121345|ref|YP_050512.1| phenylalanyl-tRNA synthetase subunit beta [Pectobacterium atrosepticum SCRI1043] gi|66773904|sp|Q6D4H3|SYFB_ERWCT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49611871|emb|CAG75320.1| phenylalanyl-tRNA synthetase beta chain [Pectobacterium atrosepticum SCRI1043] Length = 795 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 261/824 (31%), Positives = 425/824 (51%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ V E + + +T GLEV+ V+ A + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAVDSETLSEQITMAGLEVDGVEPVAGAFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGTDIRDYLKLDDNAIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 L E I P+++ ++ P+++ + C + VKG+ A P WM Sbjct: 180 AVLNQLALNEPTIE-PVAATIQDTFPIQV----EAPQACPRYLGRVVKGINVKAATPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+RSI +VD+TNYV L+ G P H FD R++ + VR A GE + LD E Sbjct: 235 REKLRRCGIRSIDPVVDVTNYVLLELGQPMHAFDLDRLNGSIIVRMAEEGETLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D +VIA ++ GI GG+H+G ++ T +VL+E A ++P++I + G+ T Sbjct: 295 VKLNADTLVIADQQNALAMGGIFGGEHSGVNEETQNVLLECAYFNPLSITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDIC-IARNITYKPRKIVFMN 408 D+ +R+ERGVD P L+H L++ +CGG A + I + R + + Sbjct: 355 DASHRYERGVD-----PALQHKAIERATRLLIDICGGEAGPVVDITSDADLPTRATITLR 409 Query: 409 SE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 E + RL G + E IL+RLG +V+ ++ + PSWR D+E + DLVEE+ RIY Sbjct: 410 REKLDRLIGHVIADEQVSDILQRLGCNVVKTDAGWQATAPSWRFDMEIEEDLVEEVARIY 469 Query: 468 GVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G + I + P PL + R SL R VK +L E + +SF+ + L Sbjct: 470 GYNNIPNIPTQAPLI-MTSHREASLALKR---VKTLLVDHGYQEAITYSFVDPKIQGLIH 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-- 583 + L + +PIS +MS MR SL GLL A N +R + +FE + D Sbjct: 526 PNEASLSLPSPISVEMSVMRLSLWSGLLSAAVYNQNRQQSRLRLFESGLRFVPDASADLG 585 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q M +G+ G+ + + + + VD +D K D +V+ L + F+ Sbjct: 586 IRQDLMLSGVITGTR--------YEEHWDLARQAVDFYDLKGDLEAVLALTGKLSEVEFK 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPG+S I E + G+ G HP + L+ FE+ D + Sbjct: 638 AENNPALHPGQSAAIYLCGERI-GFIGVIHPELERKLDLNGRTVVFELLWDKV-----AD 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 +S +RD+A +V +++PAG ++ K V ++L+ V +FDV++GK + Sbjct: 692 RVLPDANEISRFPANRRDIAVVVAENVPAGDILAECKKVGANQLV-GVNLFDVYRGKGVA 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+AI + +Q T +++I + V + ++ A LR Sbjct: 751 EGYKSLAISLTLQDTTRTLAEEEIAATVAECVAALKQRFQASLR 794 >gi|187931672|ref|YP_001891656.1| phenylalanyl-tRNA synthetase subunit beta [Francisella tularensis subsp. mediasiatica FSC147] gi|187712581|gb|ACD30878.1| phenylalanyl-tRNA synthetase, beta subunit [Francisella tularensis subsp. mediasiatica FSC147] Length = 790 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 271/813 (33%), Positives = 422/813 (51%), Gaps = 42/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNPDL 58 MKF+ +WL ++L + + DTLT GLEV+ ++ E +S + ++ ++ ++PD Sbjct: 1 MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGA N+ G+ A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLP-GNFKIKKSKLRGQESFGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCSE+EL L + + +M+LPIDAPVG ++ YL L D II+V LTPNR+DC+ V GIA + Sbjct: 120 MCSEEELGLVEKADGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A +LK + I P E+ D+ C + C +K V N + P WM + Sbjct: 180 VSALTKTELKNLEIPEPKVVIDDTKEVNITATDA--CHAYYGCIIKNVNNKIQTPLWMVE 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L+ G+ SIS VD+TNYV L G P H FD ++ + VR A + E++ LD + Sbjct: 238 KLRRSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVK 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D ++IA D + +IAG++GG + D+TT++ +E A + P IA + + TDS Sbjct: 298 LDCDTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS- 415 +RFERGVD Q +K + LI + GG + I A ++ ++I +N +K+L+ Sbjct: 358 SHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHGAEDLANLNKQIK-INLSIKKLNH 416 Query: 416 --GIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + IE +L+ L V +D EV PS+R D+E DL+EE+ RI G + Sbjct: 417 VLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDIEIPEDLIEEVARICGYSK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + E +P K N+S + L R E +N+SFI + F R + Sbjct: 477 L-PETMP-KYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFF-FADRGI 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAG 590 I NPIS D+S MR SL+PGL+ N R IFE ++ D Q AG Sbjct: 534 AIQNPISQDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAG 593 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYH 649 + G E WS+ + VD FD KAD ++ L SL FE +W H Sbjct: 594 LAYG----ELLNINWSNSKK-----VDFFDVKADVEALCN---DLTSLSFEVCNDINWLH 641 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGL--SNPICGFEVYLDSIPISQKKRTKTKKV 707 G+S I + + G G HP +L F + PI FE+ LD + I ++ TK Sbjct: 642 LGQSAYILANGNKI-GVIGVIHPTVLKNFQIKAKAPIV-FELDLD-VLIKRQIPNFTK-- 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V RD++F+VD+ + AG ++ IK ++ ++ DV++FD+++ + +KS+A Sbjct: 697 --ISKYPSVSRDISFLVDKSVLAGDIIKAIKALNINILKDVSIFDIYESQD--SDRKSIA 752 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +L Q T D I +D+++E + K N Sbjct: 753 LNMLFQDNLQTLDDKVIVESIDKVLEALKTKFN 785 >gi|71280393|ref|YP_269694.1| phenylalanyl-tRNA synthetase subunit beta [Colwellia psychrerythraea 34H] gi|91208235|sp|Q47ZS5|SYFB_COLP3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71146133|gb|AAZ26606.1| phenylalanyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea 34H] Length = 807 Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust. Identities = 269/837 (32%), Positives = 431/837 (51%), Gaps = 65/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ ++ +S + + +T GLEV+ VD S I +V+ +PD D Sbjct: 1 MKFSESWLREWVNPALSSDDLAHQITMAGLEVDGVDPVAGEFSGVVIGEVVECGPHPDAD 60 Query: 60 -CAILRIDTG--------KHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + +I G K + + +VCGA N R+GL A G+ +P + + K+R Sbjct: 61 KLQVTKISLGDYSSTTVEKGELVTIVCGAKNCRLGLKVAVATVGAVLP-GDFKIKKAKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ S GM+CSE E+ L+DDS IMEL DAP+G + +YL+L+D IDV LT NR DC+G Sbjct: 120 GVPSFGMLCSESEIGLADDSDGIMELASDAPLGQCVREYLDLNDVTIDVDLTANRGDCLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGVR- 226 ++G+A ++ G L + +S P + P I +++ + C + +KG+ Sbjct: 180 LKGLAREV-----GVLNSLEVSEPTITAVAPTIDDVITINIEANEACPRYLGRVIKGINP 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 N P WM ++L+ G RSI +VD+TNY+ L+ G+P H FD +++ + VR A EK Sbjct: 235 NATTPLWMVEKLRRCGTRSIDPVVDVTNYILLELGHPMHAFDLAKLDGGINVRFANKDEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E L +VIA + + ++AGI GG +G +NTTD+ +E A + P+ I Sbjct: 295 LTLLDENEVTLKEGTLVIADENKALAMAGIFGGLESGVTNNTTDLFLESAFFAPLAILGK 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKH-----IVSLILSLCGGTASDICIARNITYKP 401 + G+ TDS +R+ERG+D P L+H L+LS+ GG A + A++ P Sbjct: 355 ARQYGLHTDSSHRYERGID-----PTLQHDAIERATELLLSIVGGQAGPVVEAKSDADIP 409 Query: 402 RKIVFMNSEVKRL-SGIDVPIEDSL--RILERLGFSVI----GEYDKFEVSVPSWRQDVE 454 + +N K L S I IED+ IL RLGF+V GE ++V VP++R D++ Sbjct: 410 -QTKDVNLRRKMLDSRIGHHIEDAQVSEILTRLGFTVTTTGEGEAKVWQVIVPAYRFDIK 468 Query: 455 EKADLVEEILRIYGVDQIK--SEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVV 511 + DL+EE+ RI+G + I + L E K NLSL +K+ L +R E + Sbjct: 469 IEVDLIEEVARIFGYNNIPNIAPKATLKMCEQKEANLSLSN-----LKQTLVNRDYQEAI 523 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 +SF+ + L GQ + + +PIS++MS MR SL GLL++ N +R +FE Sbjct: 524 TYSFVDPKVQALLHPGQEVMTLPHPISSEMSVMRLSLWTGLLQSMVYNQNRQQGRIRLFE 583 Query: 572 VS--HVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 V + G Q+ M AG+ G R+ S E+ D +D K D + Sbjct: 584 TGLRFVPDESAENGVRQQNMIAGVISGL-------RVDEHWSMEKAA-TDFYDIKGDVEA 635 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 ++ F HPG++ I T + +G G HP + GL+ F Sbjct: 636 LLALTCDAQGYEFSKAEVDALHPGQTAQI-TKNGVFVGCVGTLHPELERKLGLNGRTLIF 694 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 E+ L + + K + +S +RDLA +V + + A ++ +I+ V + D Sbjct: 695 ELLLSEVLVQ-----KIPEATDISRFPANRRDLAIVVKEDVDAKNVLQLIEKVGGNYLID 749 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +FDV++G+ + +G KS+AI +++Q T + DI ++DR+V + + NA LR Sbjct: 750 LNLFDVYKGQGIDDGFKSLAIALVLQDTSKTLEEKDITDVIDRVVATLKTELNASLR 806 >gi|229916370|ref|YP_002885016.1| phenylalanyl-tRNA synthetase, subunit beta [Exiguobacterium sp. AT1b] gi|229467799|gb|ACQ69571.1| phenylalanyl-tRNA synthetase, beta subunit [Exiguobacterium sp. AT1b] Length = 791 Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust. Identities = 267/821 (32%), Positives = 437/821 (53%), Gaps = 47/821 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL ++D +D+S E + D +T G+EVE V NR E LS + +VLS E++P+ Sbjct: 1 MLLSKKWLNQYIDVSDLSGEALGDLITKNGIEVESVTNRGEGLSGIVVGRVLSCEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ +Q+VCGAPNVR G + A G+ +P + + K+RG+ES GM Sbjct: 61 DKLNVTKVDIGECDPVQIVCGAPNVREGQHVIVAKVGARLP--GLKIKKAKLRGVESQGM 118 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EK+ + D+ I VG + D L+L+D +I++ LTPNRSDC+ + Sbjct: 119 ICSLEELGFEKKQIREDEQDGIHTFRESVQVGADVLDLLDLNDEVIELGLTPNRSDCLSL 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLS--SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GI ++ A + E + P + + S P E+ +L + C +A VKGV Sbjct: 179 YGIIHEVAA-----ILERPYTLPTADVTSSSPSEVSIELATPN-CSYYAAREVKGVTIAE 232 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ L A G+R I+ +VD+TNYV L+ G P H FDA ++ + + VR+A +GE+++ Sbjct: 233 SPQWLKNILIAEGVRPINNIVDVTNYVMLEIGQPLHAFDAKKLGNSIVVRQAENGEEMVT 292 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ L +VI +IAG++GG + D +TTD+++E A +DP ++ ++ + Sbjct: 293 LDDVTRTLDSSMMVITDGQAPVAIAGVMGGANTEVDLSTTDIILESAYFDPASVRKTSRT 352 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 LG+ +DS RFE+GVD + ++ L LI+ L GG D + + R+I Sbjct: 353 LGLRSDSSARFEKGVDPERVMLALDRAAQLIVDLGGGAIHDAVRSGEAESRAREIQVSID 412 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G+ + + + ILERLG + G+ D V +PS R D+E AD+ EE+ R+YG Sbjct: 413 YINKRLGMTLDRQTIVHILERLGLATEGD-DVLTVHIPSRRPDLELPADITEEVARLYGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D + S LP +Q+ K L R +R+L + + + +S S+ + FGG Sbjct: 472 DSLPS-TLPASQM--KGYLPAINVLRRQTRRLLQGVGLSQAITYSLTSEAHATRFGGETD 528 Query: 530 EL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 +L + P+S + S +RTSL+PGLL+A N R ++ A++E VY +T +K Sbjct: 529 QLVRLAMPMSEERSVLRTSLVPGLLEAARYNTARQQSNVALYETGRVYTEHGETLPREKE 588 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 AG+ G LW D + R VD F AK ++++ LD + +E+ + Sbjct: 589 RVAGVVTG---------LWMDHRSQGTRIPVDYFVAKGIVDTLVQTL-RLD-VTYEAVSM 637 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTKT 704 HPGR+ I E V+GY G+ HP G S + G EVY+ + + + +T Sbjct: 638 PDMHPGRTANILMDGE-VIGYVGQVHP------GTSKDVYGMKEVYVFELDLLALRGDET 690 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 + + RDLA ++ + IPAGT+ I+ L+ D+ +FDV+ G+++G +K Sbjct: 691 LLYQDVPRYPSISRDLALVLSREIPAGTVEQTIRQAAGPLLIDLVLFDVYTGENVGADEK 750 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A + Q T +D+++ + IVE V A LR+ Sbjct: 751 SIAFSLKFQDPSRTLQDEEVTAAYETIVEAVRATHGAELRA 791 >gi|126667905|ref|ZP_01738870.1| phenylalanyl-tRNA synthetase beta subunit [Marinobacter sp. ELB17] gi|126627565|gb|EAZ98197.1| phenylalanyl-tRNA synthetase beta subunit [Marinobacter sp. ELB17] Length = 798 Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust. Identities = 266/840 (31%), Positives = 432/840 (51%), Gaps = 78/840 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + +++ D +T GLEV+ + + + +VLSVE +PD D Sbjct: 1 MKFSEQWLREWVNPALDSQQLMDQITMAGLEVDGFEPVAGKFTGIIVGEVLSVEAHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G Q +QVVCGAPNVR G+ +A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVCQVSNGSTQ-VQVVCGAPNVRAGIKVPFAELGAVLP-GDFKIKKAKLRGQPSVGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I+ELP DAPVG +DYL+L+D IDV LTPNR+DC+ ++G+A Sbjct: 119 CSGAELGLSEDHDGILELPADAPVGQSFADYLQLNDIAIDVDLTPNRADCLSIKGLA--- 175 Query: 179 VAAGLGKLKEINI--SCPLSSESI-PLEIKFDLDDSSLCKGFAMC--CVKGVRNNV---- 229 +E+ + S PL++ +I P+ + + A C + + NV Sbjct: 176 --------REVGVLNSLPLNTPAINPVAAVHNEVPDVRVEAPAGCPRYLGRILRNVDLTA 227 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P W++++L+ G RSI A VD+TNY+ L+ G P H FD + I + VR A EK++ Sbjct: 228 QSPLWLQEKLRRSGTRSIDAAVDVTNYILLELGQPMHAFDRAEIDGGIVVRMAKPEEKLV 287 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+ +VIA + +IAG++GG+H+G T D+++E A +DPI +A + Sbjct: 288 LLDGQEVTLTEQTLVIADHSKPIAIAGVMGGEHSGVRPKTRDLVLESAYFDPITLAGKAR 347 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 + G+ TD+ +RFERGVD ++ L++S+ GG A D+ + + P+ + + Sbjct: 348 HYGLHTDASHRFERGVDYNLARSAMERATELLISIVGGEAGDVVDVTSAEHLPKPVSIVL 407 Query: 409 SEVKRLSGI------DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVE 461 E KRL+ + + +ED IL RLG +V D ++VS PS+R D+ + DL+E Sbjct: 408 RE-KRLADVLGLAIANAKVED---ILTRLGLAVEERLDNGWKVSAPSFRPDITIEEDLIE 463 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR---YVKRVLASRAMMEVVNWSFISK 518 E+ RIYG + LP+T+ L + TR ++ + E + +SF+ Sbjct: 464 EVGRIYGYNN-----LPVTEPTGSLGLRPKAEDTRPLSAIRNYFVANGYQEAITYSFVDP 518 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + + + NPISAD+S MRT+L GLLK N +R +FE + Sbjct: 519 KVQEQLDPQNEGIALANPISADLSVMRTTLWSGLLKTVVHNQNRQQPRIRLFESGLRF-- 576 Query: 579 DTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 EG Q+ M AG+ G+ E W + R D FD K + S+ + Sbjct: 577 -MKEGERILQQPMLAGVVTGNQNPEN----WVNGR----RNADFFDVKGELESLFRLLGI 627 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 ++D F +G HPG++ + + V G+ G HP + L+ + FE++L+ Sbjct: 628 TVD---FRAGKHPALHPGQTAELLRDGQPV-GWLGTLHPQVQKNMELNGTVIMFELFLN- 682 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDV 752 PI K V S V+RDLA I+ + + + + ++ + FDV Sbjct: 683 -PIVTGYVPNFKDV---SKFPEVRRDLAIIIGSDVKFADVERVATHHAGEHLNALRAFDV 738 Query: 753 FQGKSLG--------EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QG+SLG EG +S+A+ + Q + T +D++ L + ++E + + A LRS Sbjct: 739 YQGESLGKGEVESESEGNRSLALSLFWQHPQRTLTEDEVHGLFNGVIEALKAELGATLRS 798 >gi|317052587|ref|YP_004113703.1| phenylalanyl-tRNA synthetase subunit beta [Desulfurispirillum indicum S5] gi|316947671|gb|ADU67147.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfurispirillum indicum S5] Length = 793 Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust. Identities = 246/814 (30%), Positives = 425/814 (52%), Gaps = 32/814 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M+ + SWLK++ D + ++ D LT GLEV+ + + + ++ S+E +P+ D Sbjct: 1 MRVSYSWLKEYTDIPLEPRELADRLTLQGLEVDAIIEYGNFTHVVVGQIESIEGHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ ++ G+ + + +VCGA N++ G A PG+ +P + V K+RG++S GM+C Sbjct: 61 LSLCVVNVGQERSLSIVCGATNMKSGDRVPVALPGAVLP-GGFAIKVSKLRGVQSEGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL L + S+ + LP DAP+G ++ YLEL D I++ LTPNRSDC+ G+A ++ Sbjct: 120 SRSELGLEEHSSGLFILPADAPIGTEVARYLELRDTAIEIGLTPNRSDCLSHVGVAREVS 179 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 +++ + + + ++ D DS C + V GVR +P W++ RL Sbjct: 180 VMTNSQVRLAKLDLREAGKPASEYVQVDTSDSGDCPRYMARIVTGVRIQPSPQWLQNRLV 239 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKILALDNQEYDL 297 A G+R I+ +VDITNY+ L G+P H FD ++ +VL VRRA +GE ++ LD +L Sbjct: 240 ACGIRPINNIVDITNYIMLGLGHPLHAFDYDKLERKEVL-VRRARAGETMVTLDEVTREL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + ++VI + ++AG++GG H+ D+ TT VL+E A +D + ++ K L + ++S Sbjct: 299 TEQDMVITDGQKPIALAGVMGGLHSSIDNGTTTVLIEAATFDGSVVRKTAKRLALHSESS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD G + L+ L GGT + + PR ++ ++++ G Sbjct: 359 HRFERGVDPNGCQYAIDLAAHLMAELGGGTIAPGAVDCYKAVSMPRTLLLRLPRIRQILG 418 Query: 417 IDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + +E+ ++IL+RLG +V+ D +V VP++ D+ + DL+EEI RIYG I + Sbjct: 419 ATIGVEEVVQILQRLGMTVLSSQDDVLQVQVPTYTGDIHREVDLIEEIARIYGYANI-AP 477 Query: 476 PLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQ-SVLFGGGQREL 531 LP + L Q++R +K+ LA R E +N+SF S + G G+R + Sbjct: 478 ALPAVEA-----LPPQKTREEALLDIKQTLAGRGYFEAINYSFTSASNLEKVLGAGKR-V 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPEGQKYMAAG 590 +LN IS +++ MRTSL+P LL N+ + E+S+ V E G+ + Sbjct: 532 HLLNAISEELAVMRTSLIPSLLMNIKGNLHLGQDSLRLQEISYAVCEGHDGTGEIPPSRL 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G+ E + W+D + + +F K D L + + L +L + W HP Sbjct: 592 LLSGAVCGEMPKQWWTDSPQP----LGIFHVKGD-LEFLWNHLGL-ALEVRPASRPWLHP 645 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G S I + +GY GE HP + L + FE+ ++ P+ ++ + Sbjct: 646 GISADIVLDG-VTIGYLGEIHPQVRQALDLEARVTVFEIEME--PVLNSSLARSWGFSEI 702 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQV 769 S RDLAF+V+Q + +++ ++ L ++++ +FDV+Q L +KS+A + Sbjct: 703 SRFPSTWRDLAFVVNQAVTTQQVIDAMRGSGALYLENIRLFDVYQ---LDGERKSLAFHL 759 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + T D + + IVE+V +KT LR Sbjct: 760 VFRDASQTLTDVIVDQQIKAIVESVSRKTGGTLR 793 >gi|309788458|ref|ZP_07683062.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1617] gi|308923840|gb|EFP69343.1| phenylalanyl-tRNA synthetase, beta subunit [Shigella dysenteriae 1617] Length = 784 Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust. Identities = 257/798 (32%), Positives = 415/798 (52%), Gaps = 35/798 (4%) Query: 19 EKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + + + +T GLEV+ V+ + + +V+ ++P+ D + +++ G + + +V Sbjct: 8 DALANQITMAGLEVDGVEPVAGSFHGVVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIV 67 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 CGAPN R GL A G+ +P + + K+RG S GM+CS EL +SDD I+EL Sbjct: 68 CGAPNCRQGLRVAVATIGAVLP-GDFKIKAAKLRGEPSEGMLCSFSELGISDDHNGIIEL 126 Query: 137 PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLS 196 P DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ L E I P+ Sbjct: 127 PADAPIGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDVAVLNQLPLVEPEI-VPVG 185 Query: 197 SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNY 255 + +I + ++ C + VKG+ P WM+++L+ G+RSI A+VD+TNY Sbjct: 186 A-TIDDTLPITVEAPEACSRYLGRVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNY 244 Query: 256 VSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAG 315 V L+ G P H FD RI + VR A GE ++ LD E L+ D +VIA + ++ G Sbjct: 245 VLLELGQPMHAFDKDRIEGGIVVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGG 304 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 I GG+H+G +D T +VL+E A + P++I + G+ TD+ +R+ERGVD ++ Sbjct: 305 IFGGEHSGVNDETQNVLLECAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMER 364 Query: 376 IVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLGF 433 L++ +CGG A + N P++ I S++ RL G + E IL RLG Sbjct: 365 ATCLLIDICGGEAGPVIDITNEATLPKRATITLRRSKLDRLIGHHIADEQVTDILRRLGC 424 Query: 434 SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV---EDKRNLSL 490 V D+++ PSWR D+E + DLVEE+ R+YG + I EP+ + + + +LSL Sbjct: 425 EVTEGKDEWQAVAPSWRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSL 484 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLP 550 ++ VK +L + EV+ +SF+ + + G L + +PIS +MS MR SL Sbjct: 485 KR-----VKTLLNDKGYQEVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWT 539 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG--QKYMAAGIRKGSSGIEGSGRLWS 606 GLL N +R IFE + DT P G Q M AG+ G+ E W+ Sbjct: 540 GLLATVVYNQNRQQNRVRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEH----WN 595 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 E VD +D K D SV++ L+ + F + A HPG+S I E + G+ Sbjct: 596 LAKET----VDFYDLKGDLESVLDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERI-GF 650 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G HP + L+ FE+ + + + + +S +RD+A +V + Sbjct: 651 VGVVHPELERKLDLNGRTLVFELEWNKLADRVVPQAR-----EISRFPANRRDIAVVVAE 705 Query: 727 HIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 ++PA L K + V +FDV++GK + EG KS+AI +++Q T +++I Sbjct: 706 NVPAVDILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAA 765 Query: 786 LMDRIVENVVKKTNAVLR 803 + + VE + ++ A LR Sbjct: 766 TVAKCVEALKERFQASLR 783 >gi|290475542|ref|YP_003468430.1| phenylalanine tRNA synthetase subunit beta [Xenorhabdus bovienii SS-2004] gi|289174863|emb|CBJ81664.1| phenylalanine tRNA synthetase, beta-subunit [Xenorhabdus bovienii SS-2004] Length = 795 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 264/816 (32%), Positives = 425/816 (52%), Gaps = 35/816 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ + +S E + D +T GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWTNPAISSEALSDQITMAGLEVDGVEKVAGQFHGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++DD I+ELP DAP+G L DY++L+D I++S+TPNR+DC+ + G+A D+ Sbjct: 120 CSFSELGIADDHDGIIELPADAPIGIDLRDYIKLNDSAIEISITPNRADCLSIMGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQR 237 + E I + I+ D ++ C + +K V P WMR++ Sbjct: 180 AVINKLSMTEPQIEAVKLTTEATFPIRVDAPEA--CPRYLGRVIKNVNVKATTPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TNYV L+ G P H FD R+S + VR A GEK+ LD E +L Sbjct: 238 LRRGGIRSIDPIVDVTNYVLLELGQPLHAFDLERLSGSIIVRLAEQGEKLTLLDGNEIEL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D +VIA + + ++AGI GG+++G + T +L+E A + P+ I + G+ TD+ Sbjct: 298 SADTLVIADEKQALAMAGIFGGQYSGVNSETQHILLECAFFAPLAITGRARCYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +RFERGVD Q +++ L++++CGG A +I + +Y P+ I ++ RL Sbjct: 358 HRFERGVDPQLQHKAMEYATQLLIAICGGEAGEIIDVTSGSYLPKSATITLNRKKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + ++ IL RLG V + + ++ VPSWR D++ + DLVEEI RIYG + I Sbjct: 418 GHHIVDDEVTDILTRLGCQVTVQSNSWQAVVPSWRFDMQIEEDLVEEIARIYGYNNIPDV 477 Query: 476 PLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ + + NL L++ VK +L + E + +SF+ + + L Sbjct: 478 PVRADLVMTAHREANLPLKR-----VKTMLVDKGYQEAITYSFVDPKIQQYLHPQEEALI 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMA 588 + NPISADMS MR SLL GLL N +R +FE + V + + G Q+ M Sbjct: 533 LPNPISADMSAMRLSLLTGLLTTVVYNQNRQQNRIRLFETGLRFVPDENAEHGIRQELML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G+ G+ E W + + VD FD K D SV+E L S+ F + Sbjct: 593 GGVIAGNRFEEH----WMLEKQA----VDFFDLKGDLESVLELTGMLSSISFRAEEHPAL 644 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + GY G HP + F L+ FE+ S + + + K+V Sbjct: 645 HPGQSAGIYLENNYI-GYIGVVHPELERKFDLNGRTVIFELLWAS--LVDRVIPEMKEVS 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 S +RD+A +V +++ A ++ K V I + +FDV+ GK + EG KS+AI Sbjct: 702 RFPS---NRRDIAIVVPENVAAEDVLAECKKVGVNHIVGINLFDVYCGKGVAEGHKSLAI 758 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T + +I +++ V + ++ A LR Sbjct: 759 SLILQDTVRTLEEKEIAATVNKCVAALEQRFKASLR 794 >gi|134295552|ref|YP_001119287.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia vietnamiensis G4] gi|134138709|gb|ABO54452.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia vietnamiensis G4] Length = 809 Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust. Identities = 262/820 (31%), Positives = 413/820 (50%), Gaps = 42/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 GIA + A L I+I E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPIDIKPAHVELDETLPVRIA----APDLCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRAPVKMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVKIDADEIANIFTRLGLPFERDDDAFLVTPPSHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLTDPSAKAGELT 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G ++ R VD FD K D +++ P V+ RF Sbjct: 593 VEGYSQPKRVGALAYGPALDEQWGVATRAVDFFDVKGDLEALLAPAVA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ +G+ GE HP ++ + L + FE+ +++ +++ T Sbjct: 649 ALHPGRSARIEIDG-CAVGWIGELHPRLMQKYELPHAPVMFEIDTEAL-MARALPAPTD- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEDACRFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 763 GLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIHTLVERMAR 802 >gi|294626193|ref|ZP_06704799.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599545|gb|EFF43676.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 792 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 250/801 (31%), Positives = 416/801 (51%), Gaps = 44/801 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELSATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 AA ++ + + L ++ D + + ++G+ P W+ +R Sbjct: 179 AAACASEVVAFDAVAVAPVSTRTLAVQLDAGQDA--PRYCGRVIEGIDPAAKTPVWLAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD ++ L Sbjct: 237 LRRSGVRPVSLLVDITQYVMLELGQPMHAFDLETLHGPIGVRRSRAGEQLALLDGRQVTL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD+ Sbjct: 297 DDSFLTITDAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTDAG 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLS 415 +RFERGVD ++ L+L L GGT + A+ + +P +I + + R+ Sbjct: 357 HRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPQPARIRLRRARIARVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI + D +R+L LG V + +EV PS R D+ + DL+EE+ RI+G D++ + Sbjct: 417 GIQIDDADVVRMLRALGMHVETVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDRVPTT 476 Query: 476 -PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P +++ L + V+R L +R + E +N++F+ + + + + Sbjct: 477 LPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTEGLVPLA 533 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKYMAA 589 NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P +++AA Sbjct: 534 NPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAAETGAAPGESQHVAA 593 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + + ++ W E R VD D K D +++ S L F+ + H Sbjct: 594 AVCGDALALQ-----WG----EPARKVDFHDLKGDLMALAA--ASGAQLEFQPSTQPFGH 642 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGRS I + +G+ G+ HP + + + FE+ L +P+ Q+ + + Sbjct: 643 PGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQL--MPLVQRTLPRAGE--- 696 Query: 710 LSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G KS+A+ Sbjct: 697 LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKSLAMG 756 Query: 769 VLIQPLKDTFRDDDIRILMDR 789 +++Q D+ R L DR Sbjct: 757 LILQ--------DNSRTLTDR 769 >gi|163856952|ref|YP_001631250.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella petrii DSM 12804] gi|163260680|emb|CAP42982.1| phenylalanyl-tRNA synthetase beta chain [Bordetella petrii] Length = 805 Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust. Identities = 258/811 (31%), Positives = 423/811 (52%), Gaps = 53/811 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL+ ++ ++ +++ LT GLEVE + PFT + ++ ++ +PD Sbjct: 1 MQFPESWLRALVNPPIATDELAHRLTMAGLEVE--ETAPVAPPFTGVVVARITAIAPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + +Q+VCGAPN GL A G+ +P M + V K+RG++S G Sbjct: 59 ADKLRVCQVDDGSGEPLQIVCGAPNAAQGLTVPLARVGAELP-GGMKIGVAKMRGVQSAG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++ELP G L + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELPGTLTPGQSLREALDLDDTLFTLKLTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L +S P +++++P+ I + LC FA ++GV A P Sbjct: 178 EVAA-----LTGAPLSVP-TAKAVPVTLDDRIPVAIQAPELCGRFAGRVIRGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM RL+ G RS+SALVDI+NYV L+ G PSHVFD +I + VR A GE + L+ Sbjct: 232 AWMTARLERAGQRSVSALVDISNYVMLELGRPSHVFDLDKIRGNIEVRWAREGESLELLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q +L+ V+A+ +++S+AGI+GG+ +TT++ VE A W P IA + Sbjct: 292 GQTVELNSKVGVVAAGDQVESLAGIMGGEATAVTLDTTNIYVEAAFWWPEAIAGRARRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SE 410 +++ +RFERGVD + L+ I LI+ +CGG A + + + R+ V M S Sbjct: 352 FSSEASHRFERGVDYASIPEHLEFITGLIIDICGGQAGPVD-DQAVNLPSREPVRMRLSR 410 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 R+ G+ VP + +I RLG + D F V PS+R D+ + DL+EE+ RI+G + Sbjct: 411 CHRVLGVPVPQAEVAQIFTRLGLPYQVQGDDFIVEPPSYRFDLSIEEDLIEEVARIHGFE 470 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 ++ P P+ + + + +++ ++R+ A++ EVVN+SF+ + + G Sbjct: 471 RLPDVP-PMARAQMFSHPEVRRG-PHALRRLAAAQDYQEVVNYSFVEADWERDYAGNDNP 528 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM-AA 589 + +LNPI++ +S MR+SL+ GL+ N +R A +FE+ V+ D + A Sbjct: 529 VRLLNPIASHLSVMRSSLIAGLVANIRYNANRKQARVRVFELGRVFLRDAAHQDGPLEVA 588 Query: 590 GIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 G+R+ + +G W EE+ R VD +D K D ++ + LRFE A Sbjct: 589 GVRQ---PLRLAGAAWGPAVEEQWGVPTRQVDFYDVKMDVQALFGARAA--QLRFEPAAH 643 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I + V G+ GE HP L + FEV + ++ + Sbjct: 644 PALHPGRSARIDLDGQPV-GWIGELHPRWAQQADLPHAPVVFEVDVQAL-----SQASLP 697 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD------RLIDDVTVFDVFQ----- 754 +V LS V RDLA VD + A +++ + ++ DV +FDV++ Sbjct: 698 QVGELSRQPVVVRDLALWVDLSVNAQAMLDTVAATIAADPQLAVVQDVRLFDVWRDRPQD 757 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 G+ + E KS+A + +Q + T D++R+ Sbjct: 758 GRPVTE--KSLAFRFWLQDTEVTL--DEVRV 784 >gi|330816674|ref|YP_004360379.1| Phenylalanyl-tRNA synthetase, beta subunit [Burkholderia gladioli BSR3] gi|327369067|gb|AEA60423.1| Phenylalanyl-tRNA synthetase, beta subunit [Burkholderia gladioli BSR3] Length = 809 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 264/818 (32%), Positives = 417/818 (50%), Gaps = 42/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RAAAPPTSRIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G + +VCGAPNV V L+G PP ++ + K+R Sbjct: 59 ADKLNVCQVDAGTGTTLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFLIKLSKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D + ++ LP D P+G + D L L+D I ++ LTPN++DC+ Sbjct: 118 GVESQGMLCSARELKLSEDHSGLLVLPEDTPIGQDIRDTLNLNDTIFEIKLTPNKADCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V GIA + A LK + + P + + + + LC F+ ++GV Sbjct: 178 VYGIARETAAITGAPLKPV--AFPPAKVELDETLPVRISAPDLCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPLWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGETLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDEQVGVIADQSQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYSTTVEHIERITQLILDICGGQAGPVD-DQAVNLPSRAPVTMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ V E+ I RLG S + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVAVAAEEIASIFTRLGLSFTQDGDSFAVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + Q+S ++ LA+R E VN+SF+ + F G Sbjct: 475 FERIPARP-PVATSEMRATNETQRS-IHTIRHALAARDYAETVNFSFVDADWERDFAGNT 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP--EGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE VY D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVSVLRHNLNRRADRVRVFETGRVYLADAEVVAGELS 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G L ++ R VD FD K D +++ P V+ RF Sbjct: 593 VEGYRQPKRVGALAYGPLLDEQWGAPTRQVDFFDVKGDLEALLAPAVA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ +++ I++ T+ Sbjct: 649 ALHPGRSARIELDGRAV-GWIGELHPRLMQQYELPHAPVMFEIDAEAL-IARALPVPTE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + IK + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQQVEVQALFDAIKGALSGEACKFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 L +KS+A +V +Q T +D+ + + + +VE++ Sbjct: 763 GLAAHEKSLAFRVTLQDPAGTLQDETVDLAIQALVESM 800 >gi|303257526|ref|ZP_07343538.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] gi|302859496|gb|EFL82575.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderiales bacterium 1_1_47] Length = 803 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/797 (32%), Positives = 420/797 (52%), Gaps = 50/797 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M F+ WL+ +++ +S +++C+TLT GLEVE + A + + +VL+ +++P+ D Sbjct: 1 MLFSEEWLRHYINPALSSDELCETLTMGGLEVEGAEPIAPAFTGVIVAQVLTCDQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D GK + +Q+VCGAPNV+ G+ A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLHVCTVDIGKGEPVQIVCGAPNVKAGVKVPCATIGAVLP-GDFKIKKAKLRGVESNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL +S+D + + LP DAPVG + Y L D I+V TPNR D + V G+ DL Sbjct: 120 CSSRELGISEDHSGLWILPEDAPVGEDIRVYERLDDKKIEVKATPNRGDALSVIGVGRDL 179 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 A +L + S P + + + E++ + D LC FA V GV P WM+ Sbjct: 180 RALTGAELSLPDFSPVPATCDRV-HEVRNEAPD--LCGRFAGRVVCGVNAKAPTPQWMKD 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G RSISALVDI+NYV L+ G P+H+FD ++ LTVR GEK L+ Q D Sbjct: 237 RLERSGQRSISALVDISNYVMLELGRPTHIFDLDKLDGPLTVRWGKEGEKGELLNGQTVD 296 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 + P VI+ + I++IAGI+GG HA T +V +E A W P I + L TD+ Sbjct: 297 IDPYFGVISDNNGIEAIAGIMGGDHAAVSLETKNVFIEAAFWWPKAIQGRCRKLNFSTDA 356 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKP-RKIVFMNSE-VKR 413 YRFERGVD Q + +++I LIL +CG + + + + I P R+ V M ++ ++ Sbjct: 357 AYRFERGVDFQSNVDHMEYITRLILEICGTSETKVGPVVDEIEELPVREPVRMRADRCRK 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + G D+ + RLGFS E D F V PS+R D+E + DL+EE+ R+YG + Sbjct: 417 VIGADISDDKMAECFTRLGFSFKKEGDTFVVDAPSYRFDIEIEEDLIEEVARLYGYQNLT 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P PL +V + R K+ +A E++N+SFIS++ F + +++ Sbjct: 477 EIP-PLARVAMLERSEAKLDRHELRKK-MAGLGFQELINYSFISEDAEADFAEVKDPIKV 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAGIR 592 LNPI++ M+ MRT L+ GL+ N++R A+FE+ ++ D + +G G+ Sbjct: 535 LNPIASQMAVMRTQLISGLVDRLKYNLNRKADRAALFELGRIFRRDPSVKGSDSAVEGVY 594 Query: 593 KG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + ++ + GS R W +K+ R D FD K +E + +LRFE Sbjct: 595 QPLHLAALVYGSARPAQWGEKA----RNFDFFDLKG----AVEMLLPGRNLRFEKSNHPA 646 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRT 702 HPGR+ E + G+ GE HP + + L + FE+ ++ +P+++ Sbjct: 647 LHPGRAATAYLDGEEI-GFIGELHPELAHKYELPHSPIVFELKEEALLDIGVPVNRS--- 702 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL------IDDVTVFDVFQGK 756 LS P+ RD+A +D +P L++ ++ + + +FD+++ + Sbjct: 703 -------LSKFQPMSRDIAVFIDDAVPVQKLMDAVRKAAKKDPRLLSLSSFKLFDLYKPQ 755 Query: 757 SLGE-GKKSVAIQVLIQ 772 GKKS+A +L+Q Sbjct: 756 DGANVGKKSLAFNMLLQ 772 >gi|83748302|ref|ZP_00945327.1| Phenylalanyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|207742951|ref|YP_002259343.1| phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) (phers) protein [Ralstonia solanacearum IPO1609] gi|83725034|gb|EAP72187.1| Phenylalanyl-tRNA synthetase beta chain [Ralstonia solanacearum UW551] gi|206594346|emb|CAQ61273.1| phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) (phers) protein [Ralstonia solanacearum IPO1609] Length = 809 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 271/831 (32%), Positives = 426/831 (51%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE VD S + V+ V R+PD D Sbjct: 1 MQFPESWLRSFVNPPITTAELSHRLTMAGLEVEDVDPVAPPFSQIVVGHVVEVGRHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + V K+RG+ Sbjct: 61 RLNVCKVDVGTGELLQIVCGAPNVSVGIKVPCALVGAELPPGD--DGKPFKIKVGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS++ A ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEEHAGLLILPEDTPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ S+ +P+++ D LC F+ ++GV Sbjct: 179 GVARE-VSALTGAPVTLPSMAPVAVTLSDKLPVKV----DAPDLCGRFSGRVIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVARIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VIA + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTIAIDEKVGVIADEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVF 406 TD+ +RFERGVD + ++ I +LIL +CGG A I I T P ++ Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISTLILEICGGQAGPIDDHIVNLPTRAPVRMRV 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + R+ GI + + RLG + E D F V PS+R D+E + DL+EE+ RI Sbjct: 414 --ARAARVLGIALTNATVSDVFTRLGLAFRVEGDDFIVDPPSYRFDLEIEEDLIEEVARI 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG +QI ++P P+ E + + RT + V+ +A+R EVVN++F+ E F Sbjct: 472 YGFEQIPAKP-PVA--ESAMRPTDEARRTMHDVRHAVAARDYSEVVNFAFVETEWEADFA 528 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG 583 G + + +LNPI++ S MR++LL GLL N++R + +FEV V+ + D +G Sbjct: 529 GNTQPIALLNPIASQYSVMRSTLLGGLLDKVRYNLNRKASRVRLFEVGRVFRRDADVADG 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +A + +G G ++ + R VD FD K D S++ P + RFE Sbjct: 589 GLSVAGYAQPMRAGGIAYGPATEEQWGVQTRAVDFFDVKGDVESLLWPLQA----RFERA 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGRS + +G+ GE HP L + L + +E+ LD+ I+ Sbjct: 645 EHPALHPGRSARVVLDGR-AIGWIGELHPRWLQKYDLPSAPVVWELDLDA--ITAVGLPA 701 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVFDVFQGK- 756 ++V + + V RD+A +V Q + LV+ R + V +FD F+ K Sbjct: 702 YREVPRVPA---VTRDIALVVRQDVAVQDLVDAFGRAALGMPWQRYLQGVVLFDEFRPKA 758 Query: 757 ---SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 759 ATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLRA 809 >gi|76809813|ref|YP_333296.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1710b] gi|167824440|ref|ZP_02455911.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 9] gi|167894551|ref|ZP_02481953.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 7894] gi|167911191|ref|ZP_02498282.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 112] gi|167919214|ref|ZP_02506305.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei BCC215] gi|226199683|ref|ZP_03795236.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|254188587|ref|ZP_04895098.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|254198208|ref|ZP_04904630.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|254258910|ref|ZP_04949964.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] gi|254297834|ref|ZP_04965287.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|91208230|sp|Q3JT07|SYFB_BURP1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|76579266|gb|ABA48741.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710b] gi|157807897|gb|EDO85067.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 406e] gi|157936266|gb|EDO91936.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pasteur 52237] gi|169654949|gb|EDS87642.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei S13] gi|225928269|gb|EEH24303.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei Pakistan 9] gi|254217599|gb|EET06983.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1710a] Length = 810 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 423/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P+WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PHWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|53719553|ref|YP_108539.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei K96243] gi|53725301|ref|YP_102782.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia mallei ATCC 23344] gi|121598911|ref|YP_992861.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia mallei SAVP1] gi|124384513|ref|YP_001026201.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10229] gi|126449738|ref|YP_001080529.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia mallei NCTC 10247] gi|126453391|ref|YP_001066010.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 1106a] gi|167003085|ref|ZP_02268875.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] gi|167738845|ref|ZP_02411619.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 14] gi|167816065|ref|ZP_02447745.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 91] gi|167845973|ref|ZP_02471481.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei B7210] gi|217423746|ref|ZP_03455247.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] gi|238562600|ref|ZP_00440143.2| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242317281|ref|ZP_04816297.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] gi|254178314|ref|ZP_04884969.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|254179999|ref|ZP_04886598.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|254199734|ref|ZP_04906100.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|254206056|ref|ZP_04912408.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|254358427|ref|ZP_04974700.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|66773888|sp|Q62KI7|SYFB_BURMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|66773890|sp|Q63TM7|SYFB_BURPS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|52209967|emb|CAH35939.1| phenylalanyl-tRNA synthetase beta chain [Burkholderia pseudomallei K96243] gi|52428724|gb|AAU49317.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 23344] gi|121227721|gb|ABM50239.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei SAVP1] gi|124292533|gb|ABN01802.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10229] gi|126227033|gb|ABN90573.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106a] gi|126242608|gb|ABO05701.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei NCTC 10247] gi|147749330|gb|EDK56404.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei FMH] gi|147753499|gb|EDK60564.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei JHU] gi|148027554|gb|EDK85575.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei 2002721280] gi|160699353|gb|EDP89323.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei ATCC 10399] gi|184210539|gb|EDU07582.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1655] gi|217393604|gb|EEC33625.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 576] gi|238522285|gb|EEP85730.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei GB8 horse 4] gi|242140520|gb|EES26922.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 1106b] gi|243061336|gb|EES43522.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia mallei PRL-20] Length = 810 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 423/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P+WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PHWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVSLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|326576525|gb|EGE26433.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis CO72] Length = 798 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 261/822 (31%), Positives = 425/822 (51%), Gaps = 44/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD------DSSLCKGFAMCCVKGV-R 226 +A ++ A + +I ++ P+ P ++ D D+ C + + + R Sbjct: 179 LAREIAA-----INQIPLNRPVIQ---PTKVVTDTAPSVQVLDAKACPRYLAQRIDDIDR 230 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 P WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE Sbjct: 231 TWPTPQWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGET 290 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ Sbjct: 291 LELLNEQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGR 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKI 404 + G+ TD+ RFERGVD + V LI+S+ GG S + A N+ P KI Sbjct: 351 ARRFGLHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKI 410 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI Sbjct: 411 IVPVGKVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIA 470 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 471 RMYGYANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALF 527 Query: 525 GGGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 528 DDQSLGAVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVE 587 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ S + +G L +++S R +D +D K D S++ + + +E Sbjct: 588 HV------VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKAKVTYER 640 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 ++ HPG+S + E LG+FG+ HP+I L + ++ LD + + Sbjct: 641 TTLTFLHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLIALNR--- 695 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEG 761 K+ ++ S V+RDLA +VDQ + TL +I K + + D+ +FD++ G++L +G Sbjct: 696 KSNPIIAPSKFPSVRRDLAVLVDQDVAWQTLEKDIRKAAGKYLQDIWLFDIYVGETLPKG 755 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 756 KKSLAFAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|221214898|ref|ZP_03587866.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] gi|221165125|gb|EED97603.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD1] Length = 809 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 264/821 (32%), Positives = 418/821 (50%), Gaps = 46/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQMTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDALNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 GIA + A L + I P+ E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVEIRPAPVELDETLPVRIS----APDLCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRTPVKMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVQIDADEIANIFTRLGLPFERDGDVFSVTPPSHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATNETRRS-IHDIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFETGRVFIADPSVKAGELT 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D ++ ++ + RF Sbjct: 593 VEGYAQPKRVGALAYGPAFDEQWGIATRAVDFFDVKGDLEAL----LAPAAARFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARALPAPTD- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + TL + +K + R + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQAVEVQTLFDEMKQALADDACRFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L +KS+A +V +Q T +D+ ++D+ +E +V++ Sbjct: 763 GLAAHEKSLAFRVTLQDPAGTLQDE----VVDQAIETLVER 799 >gi|146329265|ref|YP_001209943.1| phenylalanyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] gi|146232735|gb|ABQ13713.1| phenylalanyl-tRNA synthetase, beta subunit [Dichelobacter nodosus VCS1703A] Length = 789 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 255/825 (30%), Positives = 427/825 (51%), Gaps = 58/825 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKV-----LSVERN 55 MK + +WLK+ V+ ++ LT GLEV+ + A F+ V V L+ N Sbjct: 1 MKLSTAWLKNEFKLTVASAELSQRLTMAGLEVDGI--LPAAPDFSGVIVGEVIALTAHEN 58 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D I ++ G + +Q+VCGA NV G+ A G+ +P +N+ + K+RG+ S Sbjct: 59 AD-KLKIATVNIGTDEMLQIVCGAANVAQGIRVPVALIGAVLP-DNIHIKKSKLRGVASF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS +EL +SDD + +M LP DAP+G L YL+L DPI+++ LTPNR+DC +RG+A Sbjct: 117 GMLCSARELGMSDDHSGLMILPQDAPIGSDLRHYLQLDDPILEIDLTPNRADCFSMRGLA 176 Query: 176 LDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSL--CKGFAMCCVKGVRNN 228 + VA L K PL+ +P + +F +D+ + C + ++G+ N+ Sbjct: 177 RE-VALLLQK--------PLTFTPVPEYPATADARFHIDNRAPKDCPLYLARRIEGINNH 227 Query: 229 V-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 P W+R+RL+ G+R+ +VD TNYV + G P H FDA++++ + +RRA E + Sbjct: 228 QETPFWLRERLRRAGIRTHDPIVDCTNYVMMLLGTPLHAFDAAKVAGDIVIRRAQKAESL 287 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + L++ + L D ++IA + +IAG++GGK C +NT V++E A + P+ I+ Sbjct: 288 VLLNDHQAALDEDVLLIADQEKALAIAGVMGGKETACTENTQAVILESAWFQPVTISGKA 347 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IV 405 + + +DS RFERGVD L + LI+ +CGG+AS I + P++ I Sbjct: 348 RRFALSSDSAQRFERGVDFTLQRQALDLVTQLIIEICGGSASAIVEHHAPEFLPQRLPIT 407 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +E+ RL G P E+ I LG ++ D + ++ P+WR D+ AD +EEI R Sbjct: 408 LPFTEIPRLLGYSYPDENIKNIFVSLGCTIEKTTDSWLITPPAWRFDLAIAADCIEEIAR 467 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + G D I E LP QV K + + ++R + + E + SFI + F Sbjct: 468 VEGYDHI-PEQLP-AQVYQKDHQA--PPSDAVLRREMVAMGFQETITLSFIDRATHAAFF 523 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + + NPISA++S MR SL+P L++ N R D +FE+ V+ P+G Sbjct: 524 ADAPTVNLFNPISAELSEMRLSLVPSLVQKLIYNRHRQQNDVRLFEIGSVF---IPQGNS 580 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + +G+ SG ++ R VD FD K V+E V+ + ++ Sbjct: 581 AADCQQIEHIAGVM-SGHAQPEQWGFNSRTVDFFDVKG----VVERLVAGLDVSYQRSNV 635 Query: 646 SWYHPGRSGIIKTSAEIV-----LGYFGEFHPNILDFFGLS-NPICGFEVYLDSIPISQK 699 ++ HP + SAEI+ +G FG HP++L+ I FE+ S P+ Sbjct: 636 AYLHPHQ------SAEIIYRDQSIGRFGMLHPSMLETLNTKGGAIAVFEI--TSAPLLFH 687 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSL 758 + + + S V+RD+A ++D+ I A +++N++ K+ ++ FDVF G L Sbjct: 688 HTPQFQTIAKFPS---VRRDIALVLDRSIDAESVLNLLKKHGGNVLKHCFCFDVFTGAPL 744 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + KKS+A+ +++Q + T +D+ + ++ ++E + + A LR Sbjct: 745 TDDKKSMAVALILQDNEKTLQDEYVERIIAPLIELLHQNFGAELR 789 >gi|294667577|ref|ZP_06732792.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602697|gb|EFF46133.1| phenylalanyl-tRNA synthetase beta subunit [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 796 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 250/805 (31%), Positives = 414/805 (51%), Gaps = 48/805 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ + +++ TLT+IGLEVE+V E+L + +++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQATRDELSATLTAIGLEVEEVTPLGESLGQVVVARIVEAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAKIGE--LTITAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 AA ++ + + L ++ D + + ++G+ P W+ +R Sbjct: 179 AAACASEVVAFDAVAVAPVSTRTLAVQLDAGQDA--PRYCGRVIEGIDPAAKTPVWLAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD ++ L Sbjct: 237 LRRSGVRPVSLLVDITQYVMLELGQPMHAFDLETLHGPIGVRRSRAGEQLALLDGRQVTL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + I GR ++AG++GG + T +V +E A +DP I G+ LG+ TD+ Sbjct: 297 DDSFLTITDAGRPVALAGLMGGLDTRVTETTRNVFLESAYFDPAAIMGRGRKLGLHTDAG 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI------VFMNSEV 411 +RFERGVD ++ L+L L GGT + A+ + P + + + Sbjct: 357 HRFERGVDPALPPQAIEVATRLVLELAGGTPGPVVHAQLPEHLPEHLPQPARIRLRRARI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R+ GI + D LR+L LG V + +EV PS R D+ + DL+EE+ RI+G D+ Sbjct: 417 ARVLGIQIDDADVLRMLRALGMHVETVAEGWEVMAPSRRFDIAIEEDLIEELARIHGYDR 476 Query: 472 IKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + + P +++ L + V+R L +R + E +N++F+ + + Sbjct: 477 VPTTLPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTEGL 533 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQK 585 + + NP+SA+++ MR LLPGL+ GRN R +FE+ V+ P + Sbjct: 534 VPLANPLSAELAIMRPRLLPGLVATLGRNAARQAGRVRLFELGKVFAAAAETGAAPGESQ 593 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 ++AA + + ++ W E R VD D K D +++ S L F+ Sbjct: 594 HVAAAVCGDALALQ-----WG----EPARKVDFHDLKGDLMALAA--ASGAQLEFQPSTQ 642 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + HPGRS I + +G+ G+ HP + + + FE+ L +P+ Q+ + Sbjct: 643 PFGHPGRSADIYRDG-VCIGWIGQVHPRLAKALDIDVDVIAFELQL--MPLVQRTLPRAG 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + LS V+RDLAF+V + A ++ V L+ +V +FD + G+ + G KS Sbjct: 700 E---LSRFPSVRRDLAFLVPDEVSWAAVSASVRTTVGPLLREVQLFDRYVGQGVEPGFKS 756 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDR 789 +A+ +++Q D+ R L DR Sbjct: 757 LAMGLILQ--------DNSRTLTDR 773 >gi|329296188|ref|ZP_08253524.1| phenylalanyl-tRNA synthetase subunit beta [Plautia stali symbiont] Length = 795 Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust. Identities = 262/820 (31%), Positives = 426/820 (51%), Gaps = 43/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ L++ ++ + + + +T GLEV+ VD A + +V+ ++P+ D Sbjct: 1 MKFSELGLREWVNPALDSAALSEQITMAGLEVDGVDPVAGAFYGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R GL V A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDRLLDIVCGAPNCRQGLKVVVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S D I+ELP DAPVG + YL+L D I++S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGISVDHNGIIELPADAPVGTDIRQYLQLDDNTIEISVTPNRADCLGIIGIARDM 179 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 L+ + I P+S S++ P+ + D + C + VKGV P WM Sbjct: 180 AVINGLPLQALVIE-PVSATISDTFPIRV----DATDACPRYLGRVVKGVNVKAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+ G+ SI +VDITNYV L+ G P H FD RI + VR A GE + LD E Sbjct: 235 REKLRRCGICSIDPVVDITNYVLLELGQPMHAFDLDRIDGGIVVRMAKEGETLTLLDGSE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA + ++ GI GG+H+G ++ T +VL E A +DP+ I + G+ T Sbjct: 295 ATLHSDTLVIADHHKALAMGGIFGGEHSGVNEATQNVLFECAFFDPLAITGRARRHGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ +R+ERGVD ++ L+L++CGG A + + + P + I ++ Sbjct: 355 DASHRYERGVDPALQHKAMERATQLLLAICGGEAGPVIDQTDASKLPARATITLRREKLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G + E IL RLG V +++ PSWR D+ + DLVEE+ R+YG + I Sbjct: 415 RLIGHVIADEQVTDILTRLGCDVTVGNGEWQTVAPSWRFDMAIEEDLVEEVARVYGYNNI 474 Query: 473 KSEP----LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 P L +TQ + +LSL+++ K +L + E + +SF+ + L G+ Sbjct: 475 PDVPVKASLLMTQ-HREADLSLKRA-----KNLLVDKGYQEAITYSFVDPKVQQLLHPGE 528 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----Q 584 L + +PIS+DMS MR SL GLL A N +R + +FE + DT Q Sbjct: 529 EALILPSPISSDMSAMRLSLWTGLLGAVVYNQNRQQSRVRLFESGLRFVPDTQADLGIRQ 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 M AG+ SG + + + + VD +D K D S+++ LD++ F + A Sbjct: 589 DLMLAGVL--------SGNCYEEHWDLARQTVDFYDLKGDLESLLDLTGKLDAISFRAEA 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG+S I + E + G+ G HP + L+ FE+ + ++ + Sbjct: 641 NPALHPGQSAGIYLAGERI-GFIGVVHPELERKLDLNGRTLVFELLWNK--VADRVLPDA 697 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 +++ S +RD+A +V +++PA ++ K + V +FDV++GK + EG+K Sbjct: 698 REI---SRFPANRRDIAVVVAENVPAADIIAECKKVGVNQVVGVNLFDVYRGKGVNEGEK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI +++Q T +++I + + V + ++ A LR Sbjct: 755 SLAISLILQDTSRTLEEEEIAATVAKCVAALKERFQATLR 794 >gi|73540974|ref|YP_295494.1| phenylalanyl-tRNA synthetase subunit beta [Ralstonia eutropha JMP134] gi|91208133|sp|Q472N3|SYFB_RALEJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|72118387|gb|AAZ60650.1| phenylalanyl-tRNA synthetase beta subunit [Ralstonia eutropha JMP134] Length = 815 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 273/844 (32%), Positives = 433/844 (51%), Gaps = 71/844 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNP 56 M+F+ SWL+ + + +S + + +LT GLEVE+V PF + VLS ER+P Sbjct: 1 MQFSESWLRTFANPEKISTDALSHSLTMAGLEVEEVG--PVAPPFDKIVVAHVLSTERHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 + D + ++D G + +Q+VCGAPNV+ G L+G PP + V K+ Sbjct: 59 NADRLNVCQVDAGTGETLQIVCGAPNVKPGIKVPCALVGAVLPPAEA-EGKPFEIKVGKL 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 RG+ES GM+CS +EL LS+D ++ LP DAPVG + +YL+L D + + LTPN++DC+ Sbjct: 118 RGVESYGMLCSARELKLSEDHGGLLVLPEDAPVGQNIREYLDLDDQVFIIKLTPNKADCL 177 Query: 170 GVRGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSS--LCKGFAMCCVKGVR 226 + G+A ++ A L ++ P + ++ ++ K + S+ LC F+ ++GV Sbjct: 178 SIHGVAREVSA-----LTGATLTLPDMKPVAVTIDDKLPVKVSAPDLCGRFSGRVIRGVN 232 Query: 227 NNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 A P WM QRL+ G RSISA+VDI+NYV L+ G PSHVFD +I L VR GE Sbjct: 233 ARAATPAWMVQRLERSGQRSISAMVDISNYVMLELGRPSHVFDLDKIHGGLDVRWGRKGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I L+ ++ VIA D I+S+AGI+GG +TT++ +E A W P I Sbjct: 293 QIKLLNGNTIEVDEQVGVIADDKEIESLAGIMGGDSTAVTLDTTNIYLEAAFWWPSAIQG 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RK 403 + TD+ +RFERGVD + ++ I +LIL +CGG A + +I P R Sbjct: 353 RARRYNFSTDAAHRFERGVDYATTVEHIERITALILEICGGQAGP--VDDHIVNLPQRRP 410 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEKADL 459 + + +R+ GI++ + +RL + + FEV+ PS+R D+E + DL Sbjct: 411 VSLRLARAERVLGIELSSAVVADVFQRLQLPFTRSQGADGEVFEVTPPSYRFDIEIEEDL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ RIYG ++I + P P+ + E R + + T V+ LA+R EV+N++F+ ++ Sbjct: 471 IEEVARIYGFERIAARP-PVAESE-MRPTNEGRRSTHVVRHALAARDYQEVINFAFVEEK 528 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 F + +LNPI++ ++ MR+SL+ GLL N++R A +FEV V+ D Sbjct: 529 WERDFAANDNPIRLLNPIASQLAVMRSSLIGGLLDKVRYNLNRKAARVRLFEVGRVFHRD 588 Query: 580 --------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 T G Q MAAGI G + E G R VD FD K D ++ Sbjct: 589 ADVKDGGLTVAGYHQPMMAAGIAYGPAFEEQWGIT--------TRNVDFFDVKGDVETLF 640 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P V+ RFE HPGR+ + + V G GE HP L + L+ FE+ Sbjct: 641 YPRVA----RFEPVEHPALHPGRAARMLIDGKPV-GVVGEMHPRWLQEYELTQAPVLFEL 695 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK------NVDRL 743 LD++ + +S RDLA +V Q + +++ ++ R Sbjct: 696 ELDAL-----REAGLPTYAEISKFPAAVRDLAVVVKQSVRVQDMLDSMRAALDKQGCGRF 750 Query: 744 IDDVTVFDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + +FD F+ K ++G +KS+A +V +Q T +D+ + + +V+ + + Sbjct: 751 CQSLVLFDEFRPKAASAAIGADEKSLAFRVTLQDTGSTLQDETVDSAVRCMVDALGEAFQ 810 Query: 800 AVLR 803 A LR Sbjct: 811 ARLR 814 >gi|322419726|ref|YP_004198949.1| phenylalanyl-tRNA synthetase subunit beta [Geobacter sp. M18] gi|320126113|gb|ADW13673.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacter sp. M18] Length = 801 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 268/826 (32%), Positives = 434/826 (52%), Gaps = 48/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M T +W+K+ +D D+ ++ LT +GLEVE+++ + + +V+ ++P+ D Sbjct: 1 MIVTYNWIKEFVDCDLPAAELSHLLTMLGLEVERMEEVGGGMDDVVVARVVEKNQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + + +VCGA N + G A G+ +P + + KIRG ES GM+ Sbjct: 61 KLSLCKVDNGK-ELLTIVCGAQNFKAGDTVALAQIGATLP-GDFKIKRSKIRGEESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+S+ IM LP + +G L D L D + ++ LTPNR+DC+ V GIA + Sbjct: 119 CSERELALSDESSGIMILPENLKLGTPLFDALGTKDVVFEIGLTPNRADCLSVVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 VAA LG+ K ++ P+E ++ LC + + G +P W+ Sbjct: 178 VAAKLGR-KVHYPGLEVNETGAPVENIAGVEILAPELCPRYTARHITGCTLAPSPAWLAN 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEY 295 RL A G+RSI+ +VD+TNYV L+ G+P H FD ++ + V A GEK LD QE Sbjct: 237 RLLAAGIRSINNIVDVTNYVLLEYGHPLHAFDFKLVAGGKIVVAAAGEGEKFTTLDGQER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ ++ I + ++AGI+GG ++ + TT+VL+E A ++P I ++ K LGI T+ Sbjct: 297 VLTSSDLTIRDGEKAVALAGIMGGGNSEIGEGTTEVLLESAYFNPSAIRKTSKRLGIHTE 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRL 414 S +RFERG D+ G+ L LI L GG A + +PR I S + + Sbjct: 357 SSHRFERGADIAGLTRALDRAAQLIAELSGGKVAKGVIDVYPKQVEPRVITARLSRINAV 416 Query: 415 SGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 SG+ + E+ I +RL F V E F+V VP +R D+E + DLVEE++R+ G D+I Sbjct: 417 SGLQLTAEEVQDIFQRLEFEVTRTEPGVFQVQVPLFRVDLEREVDLVEEVVRLNGFDKIT 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE- 532 + LP V Q+ R VK +L S+ + EV+N+SF++ Q + Sbjct: 477 AT-LPTASVFSDLPSDAQRLAGR-VKDLLVSQGLSEVINYSFVAPSSCDKILLPQDDFRS 534 Query: 533 ----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 +LNPIS ++S MRT++LPGLL +N+ + IFE+ +Y + PE Sbjct: 535 NGMVLLNPISDELSVMRTTMLPGLLDTAVKNISFRTLNLRIFEMRRIYLPVEGEELPEEP 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSLDSL 638 Y++A + G EG W+ +E +D FD K D L+V S D L Sbjct: 595 LYLSA-LLTGKREPEG----WNQGKDE----IDFFDVKGIVENLLDDLNVGGVNYSADEL 645 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 +YHPG++ I S + VLG GE HP + + +G+S P+ E+ +++ S+ Sbjct: 646 ------DPYYHPGKACRI-LSGKKVLGSMGELHPTVQENYGISTPLYYLELNFEALLASR 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKS 757 KK+ + S RD+A ++ + +P +++ + V ++ V +FD++ G + Sbjct: 699 KKQGGAQVPSRFPSTF---RDIAMLLPRELPVAEVISCVNGVKAPELEGVEIFDLYLGGN 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +KSVAI+V + T DD++ L R+++ + KK N R Sbjct: 756 IAAHEKSVAIRVRYGSKERTLTDDEVTRLHQRVIDALQKKLNVSFR 801 >gi|326563311|gb|EGE13578.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis 46P47B1] Length = 798 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GTVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLITLNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKTAVDKVIQNLADKHAAHLR 797 >gi|239996232|ref|ZP_04716756.1| phenylalanyl-tRNA synthetase subunit beta [Alteromonas macleodii ATCC 27126] Length = 795 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 261/824 (31%), Positives = 420/824 (50%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S ++ + L+ GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSEKWLREWVNPSLSAHELSEQLSMAGLEVDGVEPVAGDFKGVLVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCRQGIKVAVAVVGAVLP-GDFKIKKAKLRGEPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL L D I+V LTPNR+DC+G+RGIA ++ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGTDIRDYLGLDDNAIEVDLTPNRADCLGIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 + E ++ ++ L I DD+ C + VKGV A P W+ ++ Sbjct: 180 GVLNNLDVCEPEVAAVNATIEDKLSITLSADDA--CPRYLGRVVKGVNVKAASPLWLVEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H F+ + I + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDPIVDVTNFVLLELGQPMHAFNLASIEGNINVRMANEGETLTLLDETEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA D + ++AGI GG H+G T D+L+E A + I + G+ TD+ Sbjct: 298 QSNTLVIADDNKALAMAGIFGGLHSGVTTETQDILLESAFFSRDAIMGRARQYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKRLS 415 +R+ERGVD Q ++ +L+L +CGG A + +A + K + + R+ Sbjct: 358 HRYERGVDPQLQRKAMERATALVLEICGGEAGPVVETVAEDKLPKQATVTLRRERLSRVL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI + +L RLG V +E PS+R D+ + DL+EEI R+YG + I + Sbjct: 418 GISIDDAKVTEMLNRLGLDVTQTEAGWEAVAPSYRFDISIEEDLIEEIARVYGYNNIPN- 476 Query: 476 PLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQR 529 V K L++ S+ +K +L SR E + +SF+ K Q+ LF + Sbjct: 477 ------VAPKATLAMLPSQEAKLPLNTMKSLLLSRGYNEAITYSFVDPKIQNALF-PDVK 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QK 585 + + +PIS+DMS MR SL PGLL AT N R +FE + + D P G Q+ Sbjct: 530 GMVLPHPISSDMSVMRVSLWPGLLGATAYNQKRQQQRVRMFETGLRFIPQQDAPNGVLQQ 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFE 641 + G+ G ++EE VD FDAKAD +++ +F Sbjct: 590 QVIGGVVAGR------------RNEEHWDLGDSPVDFFDAKADVEALLALTGRTGEFQFV 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 +G S HPG + I + E V GY G HP G++ + FE+ +D+I Sbjct: 638 TGQHSALHPGMTAKILLNDEEV-GYIGAIHPQFTKLLGVNGRVFVFELVVDAI-----TD 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLG 759 K V +S +RD+A V + G +++ I+N V++L+ + +FD ++GK + Sbjct: 692 RKLPSAVPVSRFPSNRRDIAITVKDEVRVGNVLSYIENIGVNQLV-ALNLFDEYKGKGIE 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A+ + +Q T + +I+ +D +V+ + + A LR Sbjct: 751 PGYKSLALSLHLQDPDKTLEEAEIQQAVDTVVKGLESEFGAALR 794 >gi|326565965|gb|EGE16126.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis 103P14B1] gi|326575386|gb|EGE25311.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis 101P30B1] Length = 798 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDTLIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GTVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLITLNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|326577996|gb|EGE27860.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis O35E] Length = 798 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWTNPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GTVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLITLNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|326561876|gb|EGE12211.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis 7169] gi|326568901|gb|EGE18970.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC1] gi|326569201|gb|EGE19262.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC7] Length = 798 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GTVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLITLNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|326571874|gb|EGE21879.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis BC8] Length = 798 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPGINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GTVLPLTNPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLITLNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|126438817|ref|YP_001058757.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei 668] gi|126218310|gb|ABN81816.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 668] Length = 810 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 421/827 (50%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PRWMIERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ ++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VAHALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|221197739|ref|ZP_03570785.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] gi|221204703|ref|ZP_03577720.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221175560|gb|EEE07990.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2] gi|221181671|gb|EEE14072.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia multivorans CGD2M] Length = 809 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 263/820 (32%), Positives = 415/820 (50%), Gaps = 42/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQMTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDALNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINI-SCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 GIA + A L + I P+ E++P+ I LC F+ ++GV Sbjct: 180 GIARETAAITGAPLTPVEIRPAPVELDETLPVRIS----APDLCGRFSGRVIRGVNARAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDETVGVIADDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL +CGG A + + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQAVNLPQRTPVKMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVQIDADEIANIFTRLGLPFERDGDVFSVTPPSHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATNETRRS-IHDIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPIRLLNPIASQLSVMRTTLFGSLIAVLRHNLNRRADRVRVFETGRVFIADPSVKAGELT 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D ++ ++ + RF Sbjct: 593 VEGYAQPKRVGALAYGPAFDEQWGIATRAVDFFDVKGDLEAL----LAPAAARFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARALPAPTD- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + TL + +K + R + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQAVEVQTLFDEMKQALADDACRFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 763 GLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVERMAR 802 >gi|188991105|ref|YP_001903115.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. B100] gi|167732865|emb|CAP51059.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris] Length = 791 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 255/803 (31%), Positives = 420/803 (52%), Gaps = 49/803 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ S E++ TLT+IGLEVE V +AL + ++++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQASREELAATLTAIGLEVEAVTPLGDALGQVVVARIIAAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAQIGE--LTIKAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMRQR 237 AA ++ + + + L + +L+ S + ++G+ P WM +R Sbjct: 179 AAACASEVVAFDAAAVAPVSTRTLAV--ELNAGSEAPRYCGRVIEGIDPAATTPVWMAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD +E L Sbjct: 237 LRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPVGVRRSRAGEQLALLDGREVTL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + I R ++AG++GG + T +V +E A ++P I G+ LG+ TD+ Sbjct: 297 DDSFLTITDADRPVALAGLMGGLDTRVTNTTRNVFLESAYFEPAAIMGRGRKLGLHTDAG 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLS 415 +RFERGVD ++ L+L L GG + A + +P I+ + + R+ Sbjct: 357 HRFERGVDPALAPQAIEVATRLVLELAGGVPGPVVDAALPQHLPQPASILLRRARIARVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI + D RIL LG V ++++V+ PS R D+ + DL+EE+ RI+G D++ + Sbjct: 417 GIQIDDADVARILTALGMHVEAVAERWQVTAPSRRFDIAIEEDLIEELARIHGYDRVPTT 476 Query: 476 -PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQREL 531 P +++ L + V+R L +R + E +N++F+ E+ L G + Sbjct: 477 LPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTDG---VV 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE----NDTPEGQKYM 587 + NP+SA+++ MR LLPGL+ GRNV R + +FE+ V+ D P + + Sbjct: 531 PLANPLSAELAVMRPRLLPGLVATLGRNVARQVGRVRLFELGKVFSAAGPGDAPVESQQV 590 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D L++ S L F+ + Sbjct: 591 AAAVCGDALALQ-----WG----EPARKVDFHDLKGDLLALAA--ASGAVLEFQPSTQPF 639 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + +G+ G+ HP + + + FE+ L P+ ++ + ++ Sbjct: 640 GHPGRSADIYRDG-VCIGWIGQVHPRLAKSLDIDVDVIAFELQL--APLVKRALPRAGEL 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 S+ +RDLAF+V + L ++ +V L+ +V +FD + G+ + G KS+A Sbjct: 697 SRYPSM---RRDLAFLVPDAVSWAALSASVRTSVGPLLREVQLFDRYVGQGVEPGFKSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDR 789 + +++Q D+ R L DR Sbjct: 754 MGLILQ--------DNSRTLTDR 768 >gi|296112368|ref|YP_003626306.1| phenylalanyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] gi|295920062|gb|ADG60413.1| phenylalanyl-tRNA synthetase beta subunit [Moraxella catarrhalis RH4] Length = 798 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 260/817 (31%), Positives = 421/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAP 231 +A ++ A L I + +++ P + D+ C + + + R P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDRTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GAVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E LG+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-LGFFGQLHPSICKALDLPT-VWVAQMDLDKLIALNR---KSSPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + L +I K + + DV +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQALEKDIRKAAGKYLQDVWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAHLR 797 >gi|17546301|ref|NP_519703.1| phenylalanyl-tRNA synthetase subunit beta [Ralstonia solanacearum GMI1000] gi|30316255|sp|Q8XZ24|SYFB_RALSO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|17428598|emb|CAD15284.1| probable phenylalanyl-trna synthetase beta chain (phenylalanine--trna ligase beta chain) (phers) protein [Ralstonia solanacearum GMI1000] Length = 809 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 266/832 (31%), Positives = 431/832 (51%), Gaps = 51/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE+VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPPIATAELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG L+G PPG + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCALVGAELPPGD--DGKPFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS++ ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEEHGGLLILPEDTPVGADIRKVLDLDDQIFIIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ S+ +P+++ + LC FA ++GV Sbjct: 179 GVARE-VSALTGAPITLPTMAPVAVTLSDKLPVKV----EAPDLCGRFAGRIIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTVTVDDKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD ++ ++ I +LIL +CGG A I + + R+ V M Sbjct: 354 RYNFSTDAGHRFERGVDYATIVEHIERISALILDICGGQAGPID-DQIVNCPKREPVRMR 412 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ GI + E + +RLG + + D F V PS+R D+E + DL+EE+ RIY Sbjct: 413 VARAARVLGIPLSHEVVSDVFKRLGLTFSVDGDVFVVEPPSYRFDIEIEEDLIEEVARIY 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G +QI ++P P+ E+ + + RT + V+ +A+R EVVN++F+ E F G Sbjct: 473 GFEQIPAKP-PVA--ENAMRPTNEARRTMHDVRHAVAARDYHEVVNFAFVETEWEADFAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + +LNPI++ S MR++L+ GLL N++R + +FEV V+ D Sbjct: 530 NTQPIPLLNPIASQYSVMRSTLIGGLLDKVRYNLNRKASRVRLFEVGRVFRRDAEVADGG 589 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + + + G + +EE+ R VD FD K D S++ P + RFE Sbjct: 590 LS--VAGYAQPMRVGGIAYGPAAEEQWGVPARAVDFFDVKGDVESLLWPLQA----RFER 643 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 S HPGR+ + V G+ GE HP L + L +E+ LD+ I+ Sbjct: 644 AEHSALHPGRAARVVLDGRAV-GWIGELHPRWLQKYELPTAPVVWELDLDA--ITAVGLP 700 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVFDVFQGK 756 ++V + + V RD+A +V Q + LV+ + R + V +FD F+ K Sbjct: 701 AYREVPRVPA---VTRDIALVVRQDVGVQDLVDAFEKAAAGMPWQRYLQGVVLFDEFRPK 757 Query: 757 ----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 758 AATAAIGAQEKSLAFRITLQDTDSTLQDDLVEAATQQLIRAAGDAFGARLRA 809 >gi|6900405|emb|CAB72016.1| phenylalanine-tRNA-synthetase beta chain [Neisseria meningitidis] Length = 694 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 238/716 (33%), Positives = 390/716 (54%), Gaps = 36/716 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTRVDVGTGELVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ V+GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSVKGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQ 236 + A ++ I S +K +D + C F ++ V A P+WM+Q Sbjct: 180 VSALTGCAFRQPEIRKMPSEGGKTRAVK--IDAPADCGRFISRVIENVNAKAATPDWMKQ 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G+RSIS LVDI NYV L+ G P HVFDA ++S L +RRA GE + L+ + Sbjct: 238 RLERSGIRSISVLVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRAREGETLECLNEKTVS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 LS + +V+A + S+AG++GG + D T ++++E A + P IA + G +DS Sbjct: 298 LSENTLVVADEKGALSLAGLMGGAASAVSDGTQNIVLEAAWFAPEIIAGKSRQYGFGSDS 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ L+L +CGG A ++ A+ + +++ +K + G Sbjct: 358 SFRFERGVDYRLQADAIERATELVLQICGGAAGEMVEAQGELPEVKQVGLRLGRLKTVLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI---- 472 +D+P E IL+ LG + F V+ PS+R D+E +ADL+EEI R+YG + I Sbjct: 418 VDIPSEQVETILQHLGLQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDY 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 S L + ++ + R R R+ V +A+R EVV+++F++++ F + Sbjct: 478 TSGRLKMLELPETR-------RPRFAVYNEMAARGYREVVSYAFVNEQWEQDFAANADPI 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAA 589 + NP++A + MR++L+ GL++ N++R +FE++ V+ +D Q Sbjct: 531 RLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNERIG 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWY 648 G+ G++ E W K+ R D +D KAD +E + ++ F ++G P+ Sbjct: 591 GLWYGAAMPE----QWGGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGYPA-L 637 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I + + V+G+ GE HP L + L FE+ + ++ K R + Sbjct: 638 HPGRAANIVSDGK-VIGFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA 692 >gi|237812021|ref|YP_002896472.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] gi|237506299|gb|ACQ98617.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei MSHR346] Length = 810 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 423/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RLAAPPTEKIVVGRVLEVIKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P+WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PHWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVSLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|281492543|ref|YP_003354523.1| phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. lactis KF147] gi|281376207|gb|ADA65698.1| Phenylalanyl-tRNA synthetase, beta chain [Lactococcus lactis subsp. lactis KF147] Length = 797 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 251/827 (30%), Positives = 442/827 (53%), Gaps = 54/827 (6%) Query: 1 MKFTLSWLKDHLD----TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERN 55 M+ + WLK+ + T LE+ +++ G+EVE V + E LS + ++LS E Sbjct: 1 MQVSYKWLKELVPNLRATSAELEQ---KMSTSGIEVEGVTSPMEGLSKLVVGEILSSEDI 57 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 PD I +++ G + +Q+VCGAPNVRVG+ + A G+ I +N I KIRG+ES Sbjct: 58 PDTHLHITQVNVGAEESLQIVCGAPNVRVGMKVIVALMGARIADNYKIKK-GKIRGVESL 116 Query: 116 GMMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+C+ E+ + + I E+P DA VG + YL++ D II++S+TPNR+D + Sbjct: 117 GMLCALDEIGIDEKINPMKHEDGIFEMPADAKVGDSIFSYLDMDDEIIELSITPNRADAL 176 Query: 170 GVRGIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A ++ A GL +L++ ++ S + + +K + D + + ++GV+ Sbjct: 177 SMHGAAWEVGAIYGLPVQLEKKDLVEASESAASKIAVKVETDK---VPTYKIRLIEGVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ RL G++ I+ +VD+TNYV + G P H FD S+ SD + VR+A +GEK Sbjct: 234 AKSPQWLQNRLMNAGVKPINNVVDVTNYVLMAFGQPLHSFDFSKFGSDEILVRQAKAGEK 293 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+ E +L ++V+ ++G ++ G++GG + D TT V +E AL+D +I ++ Sbjct: 294 MTTLDHVERELDDSDIVVTANGLPVALGGVMGGADSEITDETTSVALEAALFDGTSIRKT 353 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKI 404 + + +++ RFE+G++ + L ++I+ L GG + N Y+P K+ Sbjct: 354 SQKFALRSEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGVVESN-DYQPILPKV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S V G D+ +E +I +LGF V E +KF +PS R D+ +ADLVEE+ Sbjct: 413 SITLSRVNSALGTDLSLETVEKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVA 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D + S LP +Q + L+ Q R V+ L S + EV+ +S ++ E++ F Sbjct: 473 RIYGYDNLPS-TLPSSQ--NAGELTQMQKFRRTVRTGLESSGLNEVIGYSLVTPEKTTEF 529 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 G ++ P++ D +R +++PGLL N +R AD AI+E+ +++ ++ Sbjct: 530 VGQLETTTLMMPMTEDRQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIFLPNPDDIR 589 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +A I SG + + VD + AK +++E + ++ + Sbjct: 590 PIEVPNLAFAI---------SGNVVDKSYNGQAVPVDFYYAKGIVENLLEAYKEVEFI-- 638 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEVYLDSIPIS 697 S + HPGR+ +IK + V G+ G+ HP + ++ +V L+ +P + Sbjct: 639 PSNNQAAMHPGRTAVIKINGR-VAGFVGQIHPATAKKYDIAETYVAGLDMQVMLEELP-A 696 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 Q T KV V RD+A ++D + +V++IK+ + + V +FD++QGK Sbjct: 697 QTIFTDIPKV------QAVHRDIALLIDAEVTHAQIVSVIKSSRVKTLSQVELFDIYQGK 750 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +L GKKS+A + QP+++T D++I +++I +N+V+K + +R Sbjct: 751 NLPAGKKSMAYSLTFQPVENTMTDEEITAAVNKITKNLVEKLDIEIR 797 >gi|119505268|ref|ZP_01627343.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] gi|119458959|gb|EAW40059.1| phenylalanyl-tRNA synthetase beta subunit [marine gamma proteobacterium HTCC2080] Length = 787 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 237/815 (29%), Positives = 428/815 (52%), Gaps = 39/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M F+ WL++ ++ +S E + + LT GLEV+ + + + +++S E++PD D Sbjct: 1 MIFSEQWLREWVNPSLSSEMLAEQLTMAGLEVDAITPVAGSFEGVVVAEIVSAEQHPDAD 60 Query: 60 CAILRIDT--GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 LR+ T + +Q+VCGAPN RVGL A G+ +P N + K+RG++S GM Sbjct: 61 K--LRVCTVNAGDKTVQIVCGAPNARVGLKAPLARLGAVLP-GNFKIKKAKLRGLDSQGM 117 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +C+ EL LS++ ++EL DAPVG L DYL L+D +++ LTPNR+DC+G+ GIA D Sbjct: 118 LCAAAELSLSEEKDGLLELAPDAPVGQDLRDYLALNDVTLELGLTPNRADCLGIAGIARD 177 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQ 236 + A L +L + +I ++ S+ C + ++ V P +M + Sbjct: 178 V--AVLNQLMACEPAVEPIQPTIDTTFSIEVTASAQCPRYLGRVIENVDLTATTPLYMVE 235 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ GLR+I +VD+TNYV L+ G P H FD +S + VR + E + LD E Sbjct: 236 RLRRSGLRTIDPVVDVTNYVMLEMGQPLHAFDLDTLSGGILVRESMPDESMTLLDGSEIA 295 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +VIA R ++AGI+GG ++G T + +E A + P IA + G+ TD+ Sbjct: 296 LTEGALVIADHQRPLALAGIMGGANSGVTAETRSIFLESAFFTPALIAGRARGYGLHTDA 355 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRL 414 +R+ERGVD Q ++ L+L++ GG+A + + P + +V ++R+ Sbjct: 356 SHRYERGVDWQLQRRAIERATELLLTVTGGSAGAVTEVVSPEDLPSQSTLVLRAERIERV 415 Query: 415 SGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G+ +P ++ RIL+ LGF+V + + PSWR D+ ++ DL+EE+ R++G ++ Sbjct: 416 LGLAMPEDEVTRILQGLGFTVTFDGSSSWSCVAPSWRFDMSQEVDLIEELARVHGYNR-- 473 Query: 474 SEPLPLTQVEDKRNLS-LQQSRT--RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 LP + +E K ++ + ++R R +++ L +R E + +SF++ EQ +F Sbjct: 474 ---LPSSHIEAKLQITPVSEARRSLRTLRQGLVARGFQEAITFSFVAPEQQAVFWPETAA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +++ NPIS++MS MR LL GL A NV R + +FE + + P ++ M Sbjct: 531 VKVKNPISSEMSEMRLGLLTGLAGAVAHNVKRQNSRVRLFETGNRFTQGQPYSEQVMLGI 590 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 G+ E W+D S VD FD K + IE ++ + F + + H Sbjct: 591 AMSGAKASEN----WADDSSR----VDFFDMKGE----IEQILTGTEVTFTTSCHAGLHD 638 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G++ I+ + ++ GY G HP + E+ L+++ ++ + + Sbjct: 639 GQTADIRLNGSMI-GYLGTVHPQAAKLLDIPANTVFAELDLNAV-----RQGRVPSYEDI 692 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +RD+A +V + + G ++ +++V + D+ +FD++ G + + +KSVA+ + Sbjct: 693 SRFPETRRDIAVVVRRELEVGEVLRAVRDVAGPGLADLNLFDIYTGSGVSDDQKSVALGL 752 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D+++ +++++++ + + +A LR+ Sbjct: 753 TFRDRSRTLDDEEVSAIVNQVIDFLKENFDAELRA 787 >gi|115351417|ref|YP_773256.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia ambifaria AMMD] gi|115281405|gb|ABI86922.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia ambifaria AMMD] Length = 809 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 264/821 (32%), Positives = 416/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDETLPVRIAA----PDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D ++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRHVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A I + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPID-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG + + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIADIFTRLGLPFVRDDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D+ G+ Sbjct: 532 DTPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLADSSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D ++ ++ + RF Sbjct: 592 TVEGYTQPKRVGALAYGPAVDEQWGVATRAVDFFDVKGDLEAL----LAPAAARFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-IARALPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVERMAR 802 >gi|85059401|ref|YP_455103.1| phenylalanyl-tRNA synthetase subunit beta [Sodalis glossinidius str. 'morsitans'] gi|93140710|sp|Q2NT27|SYFB_SODGM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|84779921|dbj|BAE74698.1| phenylalanyl-tRNA synthase beta subunit [Sodalis glossinidius str. 'morsitans'] Length = 795 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 262/818 (32%), Positives = 421/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + D +T GLEV+ V+ + + +V+ ++ + D Sbjct: 1 MKFSELWLREWVNPAIDSEALVDQITMSGLEVDGVEPVAGRFTGVVVGRVVECRQHSNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGAPN R GL A G+ +P + + V K+RG S GM+ Sbjct: 61 KLRVTKVDVGGERLLDIVCGAPNCRAGLRVAVAMLGAVLP-GDFKIKVAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++ D I+ELP +AP+G + DYL+L D ID+S+TPNR+DC+G+ GIA D+ Sbjct: 120 CSFSELGITGDHDGIIELPAEAPIGQDIRDYLQLDDNTIDISVTPNRADCLGLLGIARDV 179 Query: 179 VAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 L I P S+++P+ + D C + VK + + A P WM+ Sbjct: 180 AVRNRLPLHMPAIETVTPEISDTLPIRV----DAVEACPRYLGRVVKNINVSAATPLWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ GLRS+ A+VDITNYV L+ G P H FD +RI + VR A E + LD + Sbjct: 236 EKLRRCGLRSVDAVVDITNYVLLELGQPMHAFDRARIEGGIVVRHARQDETLTLLDGSDV 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 LS D +VIA G+ ++AGI GG T DV++E A ++P+ I + G+ TD Sbjct: 296 TLSLDTLVIADHGQALAMAGIFGGGAYCISPTTRDVVLECAFFNPLAITGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD ++ +L++++CGG + + + +P+ I + R Sbjct: 356 ASHRYERGVDPALQPRAMERATALLVAICGGQPGPVIDVTSASAQPQPATITLRRKTLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G +P ED IL RLG V + ++ PSWR D+ + DL+EE+ R+YG D I Sbjct: 416 LIGHVIPDEDVSDILTRLGCQVSRTAEGWQAVAPSWRFDMAIEEDLIEEVARVYGYDAIP 475 Query: 474 SEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P+ V R +L +R VK +L R E + +SF+ + VL Q L Sbjct: 476 NVPVRANLVMPHHREAALPLAR---VKTLLVDRGYQEAITYSFVDPKTQVLLHPQQAPLV 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMA 588 + +PIS DMS MR SL GLL A N +R +FE + V +N G Q M Sbjct: 533 LPSPISQDMSAMRLSLWTGLLGAVVYNQNRQQQRVRLFESGLRFVPDNAADLGIRQDLML 592 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+ G SD+ ++ R VD +DAK D +++E LD + F + Sbjct: 593 AGVIAGPR---------SDEHWDQLRQPVDFYDAKGDLEAILELTGKLDDIEFRAQRHPA 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I + E +G+ G HP + L+ FE+ + + K + Sbjct: 644 LHPGQSAAIYLNNE-AIGFIGVIHPELEAKLNLNGCTLVFELLWEKV-----AERKVPEA 697 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V + ++ K V ++L+ V +FDV++G+ + EG KS+ Sbjct: 698 NDISRFPANRRDIAVVVADDVAVADIIAECKKVGANQLV-GVNLFDVYRGRGVAEGFKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + + V + ++ A LR Sbjct: 757 AISLILQDTARTLEEEEIAATVAKCVAALKQRFQASLR 794 >gi|15673910|ref|NP_268085.1| phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. lactis Il1403] gi|30316290|sp|Q9CEB5|SYFB_LACLA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|12724967|gb|AAK06026.1|AE006423_5 phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis Il1403] Length = 797 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 251/827 (30%), Positives = 442/827 (53%), Gaps = 54/827 (6%) Query: 1 MKFTLSWLKDHLD----TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERN 55 M+ + WLK+ + T LE+ +++ G+EVE V + E LS + ++LS E Sbjct: 1 MQVSYKWLKELVPNLRATSAELEQ---KMSTSGIEVEGVTSPMEGLSKLVVGEILSSEDI 57 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 PD I +++ G + +Q+VCGAPNVRVG+ + A G+ I +N I KIRG+ES Sbjct: 58 PDTHLHITQVNVGAEESLQIVCGAPNVRVGMKVIVALVGARIADNYKIKK-GKIRGVESL 116 Query: 116 GMMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+C+ E+ + + I E+P DA VG + YL++ D II++S+TPNR+D + Sbjct: 117 GMLCALDEIGIDEKINPMKHEDGIFEMPADAKVGDSIFSYLDMDDEIIELSITPNRADAL 176 Query: 170 GVRGIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A ++ A GL +L++ ++ S + + +K + D + + ++GV+ Sbjct: 177 SMHGAAWEVGAIYGLPVQLEKKDLVEASESAASKIAVKVETDK---VPTYKIRLIEGVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ RL G++ I+ +VD+TNYV + G P H FD S+ SD + VR+A +GEK Sbjct: 234 AKSPQWLQNRLMNAGVKPINNVVDVTNYVLMAFGQPLHSFDFSKFGSDEILVRQAKAGEK 293 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+ E +L ++V+ ++G ++ G++GG + D TT V +E AL+D +I ++ Sbjct: 294 MTTLDHVERELDDSDIVVTANGLPVALGGVMGGADSEITDETTSVALEAALFDGTSIRKT 353 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKI 404 + + +++ RFE+G++ + L ++I+ L GG + N Y+P K+ Sbjct: 354 SQKFALRSEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGVVESN-DYQPILPKV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S V G D+ +E +I +LGF V E +KF +PS R D+ +ADLVEE+ Sbjct: 413 SITLSRVNSALGTDLSLETVEKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVA 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D + S LP +Q + L+ Q R V+ L S + EV+ +S ++ E++ F Sbjct: 473 RIYGYDNLPS-TLPSSQ--NAGELTQMQKFRRTVRTGLESSGLNEVIGYSLVTPEKATEF 529 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 G ++ P++ D +R +++PGLL N +R AD AI+E+ +++ ++ Sbjct: 530 VGQLETTTLMMPMTEDRQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIFLPNPDDIR 589 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +A I SG + + VD + AK +++E + ++ + Sbjct: 590 PIEVPNLAFAI---------SGNVVDKSYNGQAVPVDFYYAKGIVENLLEAYKEVEFI-- 638 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEVYLDSIPIS 697 S + HPGR+ +IK + V G+ G+ HP + ++ +V L+ +P + Sbjct: 639 PSNNQAAMHPGRTAVIKINGR-VAGFVGQIHPATAKKYDIAETYVAGLDMQVMLEELP-A 696 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 Q T KV V RD+A ++D + +V++IK+ + + V +FD++QGK Sbjct: 697 QTIFTDIPKV------QAVHRDIALLIDAEVTHAQIVSVIKSSRIKTLSQVELFDIYQGK 750 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +L GKKS+A + QP+++T D++I +++I +N+V+K + +R Sbjct: 751 NLPAGKKSMAYSLTFQPVENTMTDEEITAAVNKITKNLVEKLDIEIR 797 >gi|134282365|ref|ZP_01769070.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] gi|134246403|gb|EBA46492.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia pseudomallei 305] Length = 810 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 421/827 (50%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PRWMVERLDRAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPVPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|116512864|ref|YP_811771.1| phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris SK11] gi|116108518|gb|ABJ73658.1| phenylalanyl-tRNA synthetase beta subunit [Lactococcus lactis subsp. cremoris SK11] Length = 797 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 246/820 (30%), Positives = 439/820 (53%), Gaps = 40/820 (4%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WLK+ + + + +++ +++ G+EVE V + +E LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVPNLTATPDELEQKMSTSGIEVEGVTSPQEGLSKLVVGEVLSSEDIPET 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G + +Q+VCGAPNVRVG+ + A G+ I +N I KIRG+ES GM+ Sbjct: 61 HLHITQVNVGADEALQIVCGAPNVRVGMKVIVALVGARIADNYKIKK-GKIRGVESLGML 119 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ E+ + + I E+P DA VG + YL++ D II++S+TPNR+D + + Sbjct: 120 CALDEIGIDEKINPMKHEDGIFEMPADAKVGDSIFPYLDMDDEIIELSITPNRADALSMN 179 Query: 173 GIALDLVAAG--LGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G A ++ A KL+E ++ S + + +K + D + + ++GV+ + Sbjct: 180 GAAWEVGAIYDLPVKLEEKSLVEASESAASKITVKVETDK---VPTYKIRLIEGVKIAKS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ RL G++ I+ +VD+TNYV + G P H FD ++ SD + VR+A SGEKI Sbjct: 237 PQWLQNRLMNAGVKPINNVVDVTNYVLMTFGQPLHSFDFAKFGSDEILVRQAKSGEKITT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++V+ ++G ++ G++GG + D TT+V +E AL+D +I ++ + Sbjct: 297 LDHVERELDDSDIVVTANGLPVALGGVMGGADSEITDETTNVALEAALFDGASIRKTSQK 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFM 407 + +++ RFE+G++ + L ++I+ L GG + N Y+P K+ Sbjct: 357 FALRSEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGLVESN-DYQPLLPKVSIT 415 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S V G D+ +E +I +LGF V E +KF +PS R D+ +ADLVEE+ RIY Sbjct: 416 LSRVNGALGTDLSLETVKKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVARIY 475 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LPL+Q + L+ Q R V+ L S + EV+ +S ++ E++ F G Sbjct: 476 GYDNLPS-TLPLSQ--NAGELTDMQKFRRTVRTGLESSGLNEVIGYSLVTPEKATEFVGE 532 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ P++ D +R +++PGLL N +R AD AI+E+ +++ P Sbjct: 533 LETTSLMMPMTEDRQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIF---LPNADDIR 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + + I SG + + VD + AK +++E + ++ + + A Sbjct: 590 PTEVPNLAFAI--SGNVVDKSYNGQAVPVDFYYAKGIVENLLETYEEVEFVSTNNQAA-- 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEVYLDSIPISQKKRTKT 704 HPGR+ +I + + G+ G+ HP + ++ EV L+ +P +T Sbjct: 646 MHPGRTAVININGRLA-GFVGQIHPATAKKYDVAETYVASLDMEVMLEELP----AQTIF 700 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 + + ++H RD+A ++D + +V++IK+ + + V +FD++QGK+L KK Sbjct: 701 NDIPKVQAVH---RDIALLIDAEVTHAQIVSVIKSSRVKTLKQVELFDIYQGKNLPAAKK 757 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A + QP ++T DD+I +++I +N+V+K N +R Sbjct: 758 SMAYSLTFQPTENTMTDDEITAAVNKITKNLVEKLNVEIR 797 >gi|331000209|ref|ZP_08323893.1| phenylalanine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] gi|329572375|gb|EGG54028.1| phenylalanine--tRNA ligase, beta subunit [Parasutterella excrementihominis YIT 11859] Length = 803 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 259/797 (32%), Positives = 419/797 (52%), Gaps = 50/797 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M F+ WL+ +++ +S +++C+TLT GLEVE + A + + +VL+ +++P+ D Sbjct: 1 MLFSEEWLRHYINPALSSDELCETLTMGGLEVEGAEPIAPAFTGVIVAQVLTCDQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D GK + +Q+VCGAPNV+ G+ A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLHVCTVDIGKGEPVQIVCGAPNVKAGVKVPCATIGAVLP-GDFKIKKAKLRGVESNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL +S+D + + LP DAPVG + Y L D I+V TPNR D + V G+ DL Sbjct: 120 CSSRELGISEDHSGLWILPEDAPVGEDIRVYERLDDKKIEVKATPNRGDALSVIGVGRDL 179 Query: 179 VAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 A +L + S P + + + E++ + D LC FA V GV P WM+ Sbjct: 180 RALTGAELSLPDFSPVPATCDRV-HEVRNEAPD--LCGRFAGRVVCGVNAKAPTPQWMKD 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+ G RSISALVDI+NYV L+ G P+H+FD ++ LTVR GEK L+ Q D Sbjct: 237 RLERSGQRSISALVDISNYVMLELGRPTHIFDLDKLDGPLTVRWGKEGEKGELLNGQTVD 296 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 + P VI+ + I++IAGI+GG HA T +V +E A W P I + L TD+ Sbjct: 297 IDPYFGVISDNNGIEAIAGIMGGDHAAVSLETKNVFIEAAFWWPKAIQGRCRKLNFSTDA 356 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKP-RKIVFMNSE-VKR 413 YRFERGVD Q + +++I LIL +CG + + + + I P R+ V M ++ ++ Sbjct: 357 AYRFERGVDFQSNVDHMEYITRLILEICGTSETKVGPVVDEIEELPVREPVRMRADRCRK 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + G D+ + RLGFS E D F V PS+R D+E + DL+EE+ R+YG + Sbjct: 417 VIGADISDDKMAECFTRLGFSFKKEGDTFVVDAPSYRFDIEIEEDLIEEVARLYGYQNLT 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 P PL +V + R K+ +A E++N+SFIS++ F + +++ Sbjct: 477 EIP-PLARVAMLERSEAKLDRHELRKK-MAGLGFQELINYSFISEDAEADFAEVKDPIKV 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAGIR 592 LNPI++ M+ MRT L+ GL+ N++R A+FE+ ++ D + +G G+ Sbjct: 535 LNPIASQMAVMRTQLISGLVDRLKYNLNRKADRAALFELGRIFRRDPSVKGSDSAVEGVY 594 Query: 593 KG---SSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + ++ + G R W +K+ R D FD K +E + +LRFE Sbjct: 595 QPLHLAALVYGFARPAQWGEKA----RNFDFFDLKG----AVEMLLPGRNLRFEKSNHPA 646 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKKRT 702 HPGR+ E + G+ GE HP + + L + FE+ ++ +P+++ Sbjct: 647 LHPGRAATAYLDGEEI-GFIGELHPELAHKYELPHSPIVFELKEEALLDIGVPVNRS--- 702 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL------IDDVTVFDVFQGK 756 LS P+ RD+A +D +P L++ ++ + + +FD+++ + Sbjct: 703 -------LSKFQPMSRDIAVFIDDAVPVQKLMDAVRKAAKKDPRLLSLSSFKLFDLYKPQ 755 Query: 757 SLGE-GKKSVAIQVLIQ 772 GKKS+A +L+Q Sbjct: 756 DGANVGKKSLAFNMLLQ 772 >gi|187929052|ref|YP_001899539.1| phenylalanyl-tRNA synthetase subunit beta [Ralstonia pickettii 12J] gi|187725942|gb|ACD27107.1| phenylalanyl-tRNA synthetase, beta subunit [Ralstonia pickettii 12J] Length = 809 Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust. Identities = 269/837 (32%), Positives = 429/837 (51%), Gaps = 63/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ +++ LT GLEVE+VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPSITTDELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG ++G PPG + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCAMVGAELPPGE--DGKPFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ LP D PVG + L+L D + + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEDHGGLLILPEDTPVGEDIRKVLDLDDQVFIIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ ++ +P+++ LC F+ ++GV + Sbjct: 179 GVARE-VSALTGAPITMPSMAPVAVTLADRLPVKVV----APDLCGRFSGRIIRGVNAHA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR +GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKAGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTITVDEKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPEAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I +LIL +CGG A I + + R+ V M Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISALILEICGGQAGPID-DQIVNLPKREPVRMR 412 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ GI + + + +RLG + + D F V PS+R D+E + DL+EE+ RIY Sbjct: 413 VARAARVLGIPLSHDVVADVFKRLGLTFSVDGDVFIVEPPSYRFDLEIEEDLIEEVARIY 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I ++P P+ E + + RT + V+ +A+R EVVN++F+ E F G Sbjct: 473 GFERIPAKP-PVA--ESAMRPTDEARRTMHDVRHAVAARDYHEVVNFAFVEAEWEADFAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP----- 581 + +LNPI++ S +R++L+ GLL NV+R + +FEV V+ D Sbjct: 530 NTNPIPLLNPIASQYSVLRSTLIGGLLDKVRYNVNRKASRVRLFEVGRVFHRDADVADGG 589 Query: 582 -----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 Q MA GI G S E G + R VD FD K D S++ P + Sbjct: 590 LSIAGYAQPMMAGGIAYGPSKEEQWG--------VQTRPVDFFDVKGDVESLLWPLKA-- 639 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 RFE HPGRS + + V G+ GE HP L + L +EV LD+ I Sbjct: 640 --RFERAEHPALHPGRSARVVLNGRAV-GWIGELHPRWLQKYDLPTAPVVWEVELDA--I 694 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVF 750 + K ++V + + V RD+A +V Q + LV+ + R + V +F Sbjct: 695 TAVGLPKYREVPRVPA---VTRDIALVVRQDVAVQDLVDTFEKAAVGAPWQRYLQGVVLF 751 Query: 751 DVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D F+ K ++G +KS+A ++ +Q T +DD + +++ A LR Sbjct: 752 DEFRPKAATAAIGAQEKSLAFRITLQDTDSTLQDDIVEAATQQLIRAAGDAFGARLR 808 >gi|257462464|ref|ZP_05626876.1| phenylalanyl-tRNA synthetase beta chain [Fusobacterium sp. D12] gi|317060121|ref|ZP_07924606.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] gi|313685797|gb|EFS22632.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium sp. D12] Length = 795 Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust. Identities = 262/828 (31%), Positives = 442/828 (53%), Gaps = 57/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLK ++D ++ ++ LT IG EVE ++ + + L I K++ +R+P+ + Sbjct: 1 MLISLNWLKQYVDLKENVLELEKALTMIGQEVENIEEQGKYLEHVVIGKIIDYQRHPNSE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ + +Q++CGA N ++G V A G+ +P + + +IR ++S GM+ Sbjct: 61 KLTLLQVDTGE-ETLQIICGAQNHKLGDKVVVAKIGAVLP-GDFQIKKSEIRKVDSYGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL + ++ I+ LP DAP+G Y +L D + ++ +TPNR DC+ GIA ++ Sbjct: 119 CSEVELGIGTNAEGIIILPEDAPIGTEYKKYAKLDDVVFELEITPNRPDCLSYLGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 G E I P++ + + K ++D C + ++ V+ +P W Sbjct: 179 -----GAYFERKIKYPMTVMDEIIDQVSTHAKITVEDKERCHRYMGRLIRNVKVGESPEW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 ++QR++++GL+SI+ +VDITN+V + P H FD ++S + + VR A GE I+ LD Sbjct: 234 LKQRIQSMGLKSINNIVDITNFVMFECNQPMHAFDFDKLSGNEVFVRAAKEGESIVTLDG 293 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ + +VIA + +IAG+IGGK D+NT ++ +EVA + P NI ++ + LGI Sbjct: 294 VERELNGE-LVIADAEKPIAIAGVIGGKATQIDENTKNIFLEVAYFTPENIRKTSRTLGI 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-----ASDICIARNITYKPRKIVFM 407 TDS YR ERG+D +G+ + SLI + GG + R I P + + Sbjct: 353 FTDSSYRNERGMDPEGIPYAMDRAASLIQQVAGGEILSKPLDKYLVKREIVEIPVNMEKV 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEY--DKFEVSVPSWRQDVEEKADLVEEILR 465 N V + +D + + L LE L I Y + VS PS R D+ AD+ EEI+R Sbjct: 413 NKFVGKTLDLDT-VGNILTNLEIL----IKPYGPNALLVSPPSHRADLTRPADIYEEIIR 467 Query: 466 IYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +YG D I+++ +P ++ E +LQ++ +++++ + EV+N+SFI + Sbjct: 468 MYGFDNIEAK-MPREDISSGEIDEIYALQET----LRKIVTEMGLHEVINYSFIPLKAKQ 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 +F Q LEI NP+S DM+ MR +L LL N++R D EV+ + E Sbjct: 523 IFHYDQPVLEIQNPLSEDMAMMRPNLQYSLLSNVRDNLNRNQYDLKFGEVAKTFSK--IE 580 Query: 583 GQKYMAAGIRKGSSGIEGSGR----LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 G+ I GI +G LW+ E D +D KA +V++ + + + Sbjct: 581 GEDLAREDIH---LGIVLAGHKDKTLWTTGKES----YDFYDIKAYVETVLKS-IGIQNY 632 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 +HPGRS I+ + V G FGE HP++ + S I VYL + IS+ Sbjct: 633 SLARSVDPNFHPGRSADIQIGKDCV-GSFGEIHPDVAE----SMDIKKERVYLAELNISR 687 Query: 699 KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGK 756 K+ KK+ + +S V RDLA ++DQ + G ++ +I+ LI+ + +FDV+ G+ Sbjct: 688 MKKYAKKKIGYERVSKYPAVLRDLAIVLDQDVLVGDMIKMIQKRHPLIEHIDIFDVYYGE 747 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +LGEGKKSVA+ ++ + K T D +I + I++ + +K +R Sbjct: 748 NLGEGKKSVAMSIVFRDKKKTLSDIEIEENIQSILKMIREKYQGEIRQ 795 >gi|289432260|ref|YP_003462133.1| phenylalanyl-tRNA synthetase subunit beta [Dehalococcoides sp. GT] gi|288945980|gb|ADC73677.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides sp. GT] Length = 809 Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust. Identities = 262/834 (31%), Positives = 438/834 (52%), Gaps = 55/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK L WLK++L TD+ ++ + +T G EV +++ + P V +++ V R+P+ D Sbjct: 1 MKIPLKWLKEYLPTDIQPAELAERMTMAGTEVTVLNSHKDKWPNVYVGQIMGVNRHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIES 114 +L ++D G+ QE VV GAPN +VG V+A G+ + + + +++ +RG+ES Sbjct: 61 RLVLVKVDWGQGQET-VVTGAPNCKVGDKVVFARTGAVLIDGHNGKEIVLKPAVLRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSE+EL LSD+ I+ LP DAPVG S+YL + I D+ LTPNR D + V G+ Sbjct: 120 CGMVCSERELGLSDEHEGILVLPADAPVGMLASEYL--GEIIFDLELTPNRGDLMCVTGV 177 Query: 175 ALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A +L A + +L I + + I +I+ ++++S LC + ++G++ +P+W Sbjct: 178 AREL-GALIDRLPAISDPDFKATGPDIKEKIEIEINNSKLCTRYTASLIEGIKLGESPDW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 +++RL A G+R I+ +VD TNYV L+ G P H FD +I S + VR A GE + LD Sbjct: 237 LKERLIACGMRPINNVVDATNYVMLEFGQPLHAFDYDQIKSRHIIVRPAAEGEVLTTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E LSPD ++I RI ++AG++GG++ + T+ +L+E A +D +I ++ ++L + Sbjct: 297 VERKLSPDMLLITEPDRIIALAGVMGGENTEVTEKTSRILLESATFDKQSIRKTARDLKL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-IVFMNSEV 411 +++ RFE+G+ + LK LIL + GG A+ I K R IV ++V Sbjct: 357 QSEASARFEKGLSYELAPIALKRATQLILEIAGGQAASGLIDVLPNKKERNGIVLSLAKV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEY-------------DKFEVSVPSWRQDVEEKAD 458 ++ G + D+ +I +RLGF + EY D + WR D+E D Sbjct: 417 NQILGYEKEPPDACKIAKRLGFIWLPEYVPGMEEFGYGATEDMVRIYPGYWRMDIETDID 476 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++EE+ RI G I LPL + K R+++++L+ E++++SF S+ Sbjct: 477 MIEEVARIAGYHTIPC--LPLDKAIPKIETPPLPGMKRFLRQILSGYGFQELISYSFTSR 534 Query: 519 EQ-SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S + G + E L I NP+S++ MRTSL P L + N ++E+ VY Sbjct: 535 EMLSRVSSGAEPEFLAISNPMSSEQEVMRTSLRPSLYASLAANRRFEKDGLRLYELGRVY 594 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN E + + A I GSS + + D FD K ++E V Sbjct: 595 LPKENKKQEEPEMLCAVIAGGSS---------QSRWQRNTAGFDFFDVKG----IVESMV 641 Query: 634 SLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 S L + S H ++GI+ ++ +G G+ P D F ++ P+ FE+ Sbjct: 642 SRLGLSADFVVSDEHGLSHGYQAGIL--VGDMPVGILGQVSPQTADKFDITEPVYMFEIN 699 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF 750 L + R K + + V+RDLA ++D+HI +++I+ D L+ + +F Sbjct: 700 LSKLITRAMVRRKFNPINRFPA---VERDLALVIDRHITNRQVIDILSEYD-LVKNAELF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D++QGK + E KKS+A +L Q T +D+++ +M +I+ + +T AVLRS Sbjct: 756 DMYQGKQIAENKKSLAYHLLFQSDTHTLKDEEVDGVMSQILGRLNTETGAVLRS 809 >gi|167719843|ref|ZP_02403079.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei DM98] Length = 810 Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust. Identities = 257/827 (31%), Positives = 422/827 (51%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RPAAPPTEKIVVGRVLEVVKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P+WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PHWMVERLERAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P ++ + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSVRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERGGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|78045124|ref|YP_360399.1| phenylalanyl-tRNA synthetase subunit beta [Carboxydothermus hydrogenoformans Z-2901] gi|91208232|sp|Q3ABT5|SYFB_CARHZ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|77997239|gb|ABB16138.1| phenylalanyl-tRNA synthetase, beta subunit [Carboxydothermus hydrogenoformans Z-2901] Length = 798 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 269/830 (32%), Positives = 437/830 (52%), Gaps = 59/830 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M + +WL++ + + +++ + LTS+G+ VEKV + +VL VE P + Sbjct: 1 MNISYNWLQEFCEIPYTAQELGEKLTSVGIAVEKVTYIGNYEKVVVGEVLEVENLPGTEL 60 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 ++ TGK + +VV GA NV G +A PG+ +P N + + R+IRG+ S GM+ S Sbjct: 61 FKTKVSTGK-EIFEVVTGAKNVFAGFKYPFALPGAKLP-NGITIEERRIRGVVSQGMLLS 118 Query: 121 EKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +EL L + + +M LP +APVG ++ LEL D ++++ LTPNR DC+ V G+A + Sbjct: 119 AEELGLLERKGAEPGLMLLPPEAPVGEKIEKVLELDDYLLELDLTPNRGDCLSVLGVARE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A +LK PL + S P+ I ++ + LC + +K V+ +P W+ QR Sbjct: 179 VAALTGHRLKLAEPELPLDNGSCPVSI--EIQNPELCGRYMGIVIKNVKVGPSPLWLEQR 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYD 296 L+ G+R I+ +VD+TNY+ L+ G P H FD ++ S + VR A +GEKI LD E + Sbjct: 237 LRKAGIRPINNIVDVTNYILLEYGQPLHAFDLDKLASPEIIVRNARAGEKITTLDGVERE 296 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ + +VIA + ++AGI+GG++ DD+T V +E A ++P+++ ++ + LG+ TD+ Sbjct: 297 LTSEMLVIADREKPIAVAGIMGGQNTEVDDDTKTVFIEAAWFNPVSVRKTARKLGLRTDA 356 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK 412 RFE+ VD++G+ L +I L GGT D+ + + P+ I S + Sbjct: 357 SQRFEKNVDIEGIKRALIKAALMICELAGGTIQGRYGDVYPKK---FTPKVIAVSLSRAE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 GI + + + ILE LGF V IGE F V VPS+R DV +AD+ EEI R G + Sbjct: 414 EFLGISLDAKRVVEILESLGFRVTIGEKKIF-VEVPSYRPDVSLEADIYEEIARYLGYNN 472 Query: 472 IK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG--- 527 + P+ +T S + + VK +L + M E++ +SFI+ + G Sbjct: 473 FPDTMPIGITTT----GFSPEYNFEYKVKNLLTALGMQEIITYSFINPDSYNKLGLSVDE 528 Query: 528 --QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---DTPE 582 + + +LNP+S + S MRT+LLPGLL RN +R + +FE+ +V+E D P+ Sbjct: 529 VLTKSVVLLNPLSIEQSVMRTTLLPGLLDIAKRNENRQQENLLLFEMGNVFEKNGEDLPK 588 Query: 583 GQKY---MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 K +A G R G W +K R D + K S+ F SL Sbjct: 589 ETKLIGGIALGYRYGD---------WYNKP----RKYDFYYVKGILESL---FTSLGINN 632 Query: 640 FESGAPS---WYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 F A + HPG++ + + EI GY GE HP + + N FE+ D Sbjct: 633 FSFSAAKDLPFLHPGKAARVYLENTEI--GYLGELHPLVQKKYEFKNTPLVFELNYD--- 687 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 + + KK LS VKRD+A +V++ IPA T + +IK + + ++ +FDV++ Sbjct: 688 LLKTLIPAEKKYTPLSPYPEVKRDIALLVEREIPAATFIEVIKGLAINTLKNIEIFDVYE 747 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ LG KKS+AI + + T +++I M ++++ + KT A LR+ Sbjct: 748 GEKLGPNKKSIAISLTFSSTEKTLSEEEINNFMAQVLKALEAKTGAKLRT 797 >gi|171463687|ref|YP_001797800.1| phenylalanyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193225|gb|ACB44186.1| phenylalanyl-tRNA synthetase, beta subunit [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 818 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 275/846 (32%), Positives = 430/846 (50%), Gaps = 71/846 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F+ SWL+ +++ + + + +T GLEVE+ + A + I ++LS E++PD D Sbjct: 1 MQFSESWLRQYVNPSLDSDGLGHVMTMAGLEVEEQHSVAPAFTKIVIAQILSAEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G QE+Q+VCGAPN R G ++G PP + ++ V K+RG+ Sbjct: 61 RLRVCKVDAGTGQELQIVCGAPNARAGIKIPCAMVGAELPPAE-VGGKPFMIKVGKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL L DD I+ELP DAPVG + +YL L D I + LTPN++DC+ + Sbjct: 120 ESQGMLCSGRELGLGDDHEGILELPTDAPVGKDIREYLNLDDQIFVIKLTPNKADCLSLM 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 G+A ++ A L + P + +I +++ ++ LC FA ++GV P Sbjct: 180 GMAREVSAITGAALCGPEWTQP--AVTIQDKLRVAIESKELCGRFAGRVIRGVNLQAKTP 237 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+ QRL G RSIS LVD++NY L+ G P+HVFD +++ +TVR A SGE + L Sbjct: 238 EWIVQRLNRAGQRSISVLVDLSNYAMLEMGQPTHVFDIDKLNGDITVRWAKSGETLELLS 297 Query: 292 NQEYDLS-PDNV-------VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 Q L PD+ V+A ++AGI+GG H D+T +V VE A W P I Sbjct: 298 GQTVTLQGPDSAGRMQEAGVVADQNGPAALAGIMGGNHCAVTDDTKNVYVEAAYWLPSAI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + TD+ +RFERGVD Q + L+++ +LI+ +CGG A + + + RK Sbjct: 358 QGRARRFNFSTDAAHRFERGVDPQNTVNCLEYLSALIIEVCGGQAGPVD-DQVLNIPERK 416 Query: 404 IVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 V M + +++ GI + E + +RLGF E D F V+ PS+R D+E + DL+EE Sbjct: 417 SVKMRLARAEKVIGIPLTNEIVADVFKRLGFEFKQEADVFIVTPPSYRFDIEIEEDLIEE 476 Query: 463 ILRIYGVDQIKSEPLPL------TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 + R+YG + I +P P+ + E KR + L + R A + E VN+ F Sbjct: 477 VARMYGFENIPDQP-PVASLKMSAKAEAKRGIHLLRQR-------FALQGYQEAVNFGFT 528 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 E G Q + +++LNPI+ MR++L GLL N++R +FE Sbjct: 529 DLENEQRLAGAQEQDLIKVLNPIANRYGVMRSTLWGGLLGNLRANLNRGAGRVRLFEAGR 588 Query: 575 VYENDTP--EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP- 631 V++ D E +A + G G ++ R VD FD K D V++P Sbjct: 589 VFKRDASALEEAGKVAGFHQPQKIGGLAYGSFVPEQWANATRAVDFFDVKGDLERVLDPL 648 Query: 632 -FVSLDSLRFESGAPSWYHPGRSGIIKTSA---EIVLGYFGEFHPNILDFFGLSNPICGF 687 FV+ E+ HPGRS + A IV+G+ GE HP + + L F Sbjct: 649 QFVT------EAAQHPALHPGRSAQVIMRAGKSNIVIGWIGELHPGLQQTYELPQAPVLF 702 Query: 688 EVYLDSI-----PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVD 741 E+ LD I P+ ++ LS V+RDLA +V Q + +L++ + + Sbjct: 703 ELDLDPIRELGLPVPEE----------LSKFPAVQRDLALVVKQVVSVQSLLDAMAASKQ 752 Query: 742 RLIDDVTVFDVFQGK----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + + FD F+ K S+ E +KS+A +V + ++T +D I +M ++ V KK Sbjct: 753 NFVRKIEFFDEFKPKTGSSSMAEDEKSLAFRVTLLNAQETLQDPQIDAVMAALLAAVEKK 812 Query: 798 TNAVLR 803 A LR Sbjct: 813 CAARLR 818 >gi|78066091|ref|YP_368860.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia sp. 383] gi|91208231|sp|Q39H50|SYFB_BURS3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|77966836|gb|ABB08216.1| phenylalanyl-tRNA synthetase beta subunit [Burkholderia sp. 383] Length = 809 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 264/822 (32%), Positives = 418/822 (50%), Gaps = 46/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + + L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDETLPVRIA----APDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLARSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +L + V + SDGR ++S+AGI+GG +TT++ +E A W P +I Sbjct: 295 LLNGNTVELD-ETVGVISDGRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRA 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + TD+ +RFERGVD + ++ I LIL +CGG A + +++ R V M Sbjct: 354 RKYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVD-DQSVNLPQRAPVKM 412 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S R+ G+ + ++ I RLG E D F V+ PS R D+E + DL+EE+ RI Sbjct: 413 RVSRANRIIGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARI 472 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG ++I + P P+ E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 473 YGFEKIPARP-PVATSEMRATNETRRS-IHDIRHALAARDYAETVNFSFVDAEWEQDFAG 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQ 584 + +LNPI++ +S MRT+L L+ N++R +FE V+ D + G+ Sbjct: 531 NDHPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRLFEAGRVFLTDAASKAGE 590 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + ++ G G ++ R VD FD K D ++ ++ + RF Sbjct: 591 LTVEGYVQPKRVGALAYGPALDEQWGAETRPVDFFDVKGDLEAL----LAPAAARFVKAE 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGRS I+ V G+ GE HP ++ + L + FEV D++ I++ T Sbjct: 647 HPALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEVDADAL-IARALPAPT 704 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-----VDRLIDDVTVFDVFQGKS-- 757 +S PV+RD+A +VDQ + L + +K R + V +FD F+ KS Sbjct: 705 D----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNT 760 Query: 758 ---LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 761 SGGLAAHEKSLAFRVTLQDAAGTLQDEVVDQAIQTLVERMAR 802 >gi|326563426|gb|EGE13691.1| phenylalanyl-tRNA synthetase subunit beta [Moraxella catarrhalis 12P80B1] Length = 798 Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust. Identities = 258/817 (31%), Positives = 420/817 (51%), Gaps = 34/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ + ++ E + + LT GLE++ V+ PF I V +++PD Sbjct: 1 MKISENWLRQWANPSINSELLGEQLTMAGLELDGVET--VAPPFNGVVIGVVTECQQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 D + ++D G + +Q+VCGAPNV VGL A G+ +P ++ + K+RG+E Sbjct: 59 ADRLRVTKVDIGSGEHLQIVCGAPNVCVGLKVAVATIGAVLPSDDNKGFKIKKGKLRGVE 118 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C EL L D+ +MELP DAP+G + DYL L I ++++TPNR DC+ V G Sbjct: 119 SQGMLCGASELGLEDEIDGLMELPKDAPIGMDVRDYLNLDAKIFEIAITPNRGDCLSVLG 178 Query: 174 IALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAP 231 +A ++ A L I + +++ P + D+ C + + + P Sbjct: 179 LAREIAAINQMPLNRPVIQPTKVVTDTAP---SVQVLDAKACPRYLAQRIDDIDCTWPTP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM L A G+RS + LVD+TN+V L+ G P H FDA +I + VR A SGE + L+ Sbjct: 236 QWMTDALIASGVRSHNFLVDVTNFVLLELGQPLHAFDADKIQGDIIVRMAHSGETLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q LS D +VIA D + ++AGI+GG + D TT +++E A +D + I+ + G Sbjct: 296 EQIITLSGDELVIADDAGVLALAGIMGGARSAVSDETTSIILESAHFDRLTISGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + TD+ RFERGVD + V LI+S+ GG S + A N+ P KI+ Sbjct: 356 LHTDASQRFERGVDFALPKLAIDRAVGLIVSVAGGKVSQMTTAENLDALPVRHKIIVPVG 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V +L G+D+P + + +L RL + D VPS R D+ D+VEEI R+YG Sbjct: 416 KVSQLLGVDIPSDQMVDMLNRLEIVTTMQQDSLVCQVPSHRFDLTIYQDIVEEIARMYGY 475 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ- 528 I + LP V+ + + + + VKR LAS E V++SF + LF Sbjct: 476 ANICAT-LPELSVDMRYDDT--ADLVQLVKRSLASSGYYEAVSFSFSDAKIEALFDDQSL 532 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NPIS+D++ MR +L+ LL N++R +FE + E Sbjct: 533 GAVLPLANPISSDLAVMRRTLMSSLLPIVSYNLNRQQPRVRLFETGLSFVGGDVEHV--- 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 ++ S + +G L +++S R +D +D K D S++ + + +E ++ Sbjct: 590 ---VQTPSLAMIATGELTTEQSHG-TRKMDFYDLKRDIESLLPNTLDKSKVTYERTTLTF 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + E G+FG+ HP+I L + ++ LD + + K+ + Sbjct: 646 LHPGQSAHLMIDGED-FGFFGQLHPSICKALDLPT-VWVAQMDLDKLIALNR---KSNPI 700 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 + S V+RDLA +VDQ + TL +I K + + D+ +FD++ G++L +GKKS+A Sbjct: 701 IAPSKFPSVRRDLAVLVDQDVAWQTLEKDIRKAAGKYLQDIWLFDIYVGETLPKGKKSLA 760 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ Q T D+ I+ +D++++N+ K A LR Sbjct: 761 FAMVFQDQNATLEDEQIKAAVDKVIQNLADKHAAYLR 797 >gi|21231893|ref|NP_637810.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767979|ref|YP_242741.1| phenylalanyl-tRNA synthetase subunit beta [Xanthomonas campestris pv. campestris str. 8004] gi|30316244|sp|Q8P7Z6|SYFB_XANCP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|81306044|sp|Q4UW52|SYFB_XANC8 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21113617|gb|AAM41734.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573311|gb|AAY48721.1| phenylalanyl-tRNA synthetase beta chain [Xanthomonas campestris pv. campestris str. 8004] Length = 791 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 257/803 (32%), Positives = 419/803 (52%), Gaps = 49/803 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL+ H+ S E++ TLT+IGLEVE V +AL + ++++ R+P+ D Sbjct: 1 MKFSENWLRSHVPIQASREELAATLTAIGLEVEAVTPLGDALGQVVVARIIAAVRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPN R GL+ A G+ I E + + K+RG+ S GM+ Sbjct: 61 RLQVCSVDAGQGELLQIVCGAPNARAGLVAPLALVGAQIGE--LTIKAAKLRGVASNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L D++ + ELP DAPVG L++YL L D I++ LTPNR+DC VRGIA D+ Sbjct: 119 CSAKELGLDSDASGLFELPDDAPVGQALAEYLGLPDASIEIKLTPNRADCFSVRGIAFDV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMRQR 237 AA ++ + + + L + +L+ S + ++G+ P WM +R Sbjct: 179 AAACASEVAAFDAAAVAPVSTRTLAV--ELNAGSEAPRYCGRVIEGIDPAATTPVWMAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R +S LVDIT YV L+ G P H FD + + VRR+ +GE++ LD +E L Sbjct: 237 LRRSGVRPVSLLVDITQYVMLELGQPMHAFDLDTLHGPVGVRRSRAGEQLALLDGREVTL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + I R ++AG++GG + T +V +E A +DP I G+ LG+ TD+ Sbjct: 297 DDSFLTITDADRPVALAGLMGGLDTRVTNTTRNVFLESAYFDPAAIMGRGRKLGLHTDAG 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEVKRLS 415 +RFERGVD ++ L+L L GG + A + +P I+ + + R+ Sbjct: 357 HRFERGVDPALAPQAIEVATRLVLELAGGMPGPVVDAALPHHLPQPASILLRRARIARVL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI + D RIL LG V D ++V+ PS R D+ + DL+EE+ RI+G D++ + Sbjct: 417 GIQIDDADVARILTALGMHVEAAADGWQVTAPSRRFDIAIEEDLIEELARIHGYDRVPTT 476 Query: 476 -PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQREL 531 P +++ L + V+R L +R + E +N++F+ E+ L G + Sbjct: 477 LPGGASRIAMPSETQLDEL---SVRRQLVARELQETINYAFVDAALLERWQLTDG---VV 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE----NDTPEGQKYM 587 + NP+SA+++ MR LLPGL+ GRNV R + +FE+ V+ D P + + Sbjct: 531 PLANPLSAELAVMRPRLLPGLVATLGRNVARQVGRVRLFELGKVFSAAGPGDAPVESQQV 590 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AA + + ++ W E R VD D K D L++ S L F+ + Sbjct: 591 AAAVCGDALALQ-----WG----EPARKVDFHDLKGDLLALAA--ASGAVLEFQPSTQPF 639 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I + +G+ G+ HP + + + FE+ L P+ ++ + ++ Sbjct: 640 GHPGRSADIYRDG-VCIGWIGQVHPRLAKSLDIDVDVIAFELQL--APLVKRALPRAGEL 696 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 S+ +RDLAF+V + L ++ +V L+ +V +FD + G+ + G KS+A Sbjct: 697 SRYPSM---RRDLAFLVPDAVSWAALSASVRTSVGPLLREVQLFDRYVGQGVEPGFKSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDR 789 + +++Q D+ R L DR Sbjct: 754 MGLILQ--------DNSRTLTDR 768 >gi|171318447|ref|ZP_02907602.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] gi|171096361|gb|EDT41263.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MEX-5] Length = 809 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 263/821 (32%), Positives = 411/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + N S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSNAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHGGLLILPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDETLPVRIAA----PDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D ++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRHVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A I + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPID-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIADIFTRLGLPFERDDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D+ G+ Sbjct: 532 DNPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLADSSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D ++ ++ + RF Sbjct: 592 TVEGYTQPKRVGALAYGPAVDEQWGVATRAVDFFDVKGDLEAL----LAPAAARFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-----TARALP 701 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 702 APTDVSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVERMAR 802 >gi|319794586|ref|YP_004156226.1| phenylalanyL-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] gi|315597049|gb|ADU38115.1| phenylalanyl-tRNA synthetase, beta subunit [Variovorax paradoxus EPS] Length = 813 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 248/837 (29%), Positives = 414/837 (49%), Gaps = 59/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL++ + + + +TLT G EVE + R PFT + ++ E++P+ Sbjct: 1 MQFPESWLREFCNPPLDSATLAETLTMGGFEVE--ERRPVAPPFTRIVVGEIKEAEQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + +VCGAPN RVG L+G PPG ++ + K+R Sbjct: 59 ADRLRVCQVDVGQGALLNIVCGAPNARVGIKVPCALVGAELPPGE--DGKPFLIKLGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL DAP+G + D L+L D ++ + LTPN + + Sbjct: 117 GVESQGMLCSARELKLSEDHGGLLELDADAPIGADVRDVLKLDDALLTLKLTPNLAHGLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A +L A LK I+ +S + L +K + + LC F+ V+GV VA Sbjct: 177 VYGVARELAALTGAPLKTPAIAPVATSFNDVLPVKVEAPE--LCGRFSGRIVRGVNTTVA 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL G RS++ LVDI+NYV + G PSH+FD +I LTVR +GE++ Sbjct: 235 TPAWMVERLARCGQRSVTPLVDISNYVMFEYGQPSHIFDLDKIHGGLTVRWGKAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA D ++S+AGI+GG D+T ++ VE A W P + + Sbjct: 295 LNGTTITVDDKVGVIADDREVESLAGIMGGDATSVSDDTRNIYVEAAFWWPEAVQGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 TD+ +R+ERGVD + +++ I LI+ +CGG A + + + Sbjct: 355 FNFSTDAGHRYERGVDPSRSVEIIERITQLIIEICGGEAGKMDDQTLNVPAAVPVTLRVA 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 R+ G+ + L RLGF++ V+ P +R D+ + DL+EE+ R+ G Sbjct: 415 RAARVIGMPLTQAQCADALNRLGFAITEGEGTLTVTPPPYRFDLLIEEDLIEEVARLIGF 474 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + + PL + + Q+SR V+R +A+ E +N+SF+ G Sbjct: 475 NNLPTT-APLAPITARVRPEAQRSRF-AVRRSIAALGFQETINFSFVEAYWEQDLAGNAN 532 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 +++LNPI++ MS MR+SL+ LL+ N+DR +FE+ V+ D + + Sbjct: 533 PVKLLNPIASQMSVMRSSLMGSLLQVLKFNLDRKAPRVRVFELGRVFMRD--DSVVTTDS 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +R + + +G W D E R + +D +D K D +++ P V FE Sbjct: 591 TVRGVNQPMRVAGLAWGDADESRWDGKPQRIDFYDVKGDVEALLAPLVPT----FEPAEH 646 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-----IPISQKK 700 HPGRS + + +G+ GE HP + + FE+ LD+ +P++Q Sbjct: 647 PALHPGRSARVSIDGK-AIGFVGELHPRWRQKWDFAQAPVLFELDLDAVTARPVPVAQP- 704 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR---LIDDVTVFDVFQGK- 756 + V+RD+A +V + + L+ I+ L+ D T+FD+++ + Sbjct: 705 ---------VPKHQAVERDIAVVVAEAVTHDALMQAIRTTTAAQGLLRDATLFDIYRPQP 755 Query: 757 ----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +L +G+KS+A+++ Q T D+ + + IVE + K LR Sbjct: 756 LHGGAVAAPGALAQGEKSMAVRLSFQSDSATLTDEQVEPAVRAIVEQLGAKVGGRLR 812 >gi|167902954|ref|ZP_02490159.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia pseudomallei NCTC 13177] Length = 810 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 258/827 (31%), Positives = 421/827 (50%), Gaps = 42/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 M+F SWL+ +D ++ +++ LT GLEVE + R A P + +VL V ++PD Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESL--RLAAPPTEKIVVGRVLEVIKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRG 111 D + ++D G +Q+VCGAPNV G+ A G+ +P + + K+RG Sbjct: 59 ADKLNVCQVDAGTGATLQIVCGAPNVAPGIKVPVALVGAKLPPAEEGGAPFAIKLSKLRG 118 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL LS+D + +M LP PVG + + L L D + ++ LTPN++DC+ V Sbjct: 119 VESQGMLCSARELKLSEDHSGLMILPEGTPVGQDIREALNLDDTVFEIKLTPNKADCLSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 GIA + A L +I L+ + L +K D LC F+ ++GV Sbjct: 179 FGIARETAAITGAPLAAPDIRPVLAELTETLPVKISAPD--LCGRFSGRVIRGVNARAKT 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL G RS+SALVDI+NYV + G PSHVFD +I + VR GE + L Sbjct: 237 PRWMVERLDRAGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIDVRWGKRGESLKLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +L VI+ +++S+AGI+GG +TT++ +E A W P +I + Sbjct: 297 NGNTIELDETVGVISDGAQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKY 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A + I P++ + Sbjct: 357 NFSTDAAHRFERGVDYSTTVEHVERITQLILDICGGQAGP--VDDQIVNLPQRAPVSMRA 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+++ ++ +I RLG + + D F V+ P R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVEIGEDEIAQIFTRLGLAFERDGDVFRVTPPPHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ + E + ++S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVAKSEMRATDETRRS-VHAIRHALAARDYAETVNFSFVDAEWERDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 533 NPVRLLNPIASQLSVMRTTLFGSLVGVLRHNLNRRAERVRVFEAGRVFVADPSVKAGELA 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G + ++ R VD FD K D +++ P + RF Sbjct: 593 VEGYAQPKRIGALAYGPVVEEQWGTATRQVDYFDVKGDLEALLAPVPA----RFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ +++ ++ Sbjct: 649 ALHPGRSARIEVDGHAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-VARALPAPSE- 705 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + + + V +FD F+ KS Sbjct: 706 ---VSKFPPVRRDIAVVVDQKVEVQALFDEMKKALADDACKFVQRVALFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +KS+A +V +Q T +D+ + + +V+ + + A LR Sbjct: 763 GLSAHEKSLAFRVTLQDAAGTLQDETVDQAIQTLVDRMARVYGARLR 809 >gi|262281020|ref|ZP_06058803.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter calcoaceticus RUH2202] gi|262257920|gb|EEY76655.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter calcoaceticus RUH2202] Length = 793 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 259/824 (31%), Positives = 422/824 (51%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ + PFT I +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDELAS--VAKPFTGVVIGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVRVG+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRVGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ + KL+ I + +I E K + + + VK V A P WM+ Sbjct: 178 EISV--INKLEMIEPVINTVAATIADEKKVVISTEGAPR-YLGRVVKNVNVKAATPEWMQ 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD S+I + VR+A EK+ L++QE Sbjct: 235 QALSRSGIRTHSILVDVTNYVLMELGQPMHAFDLSKIEGTVHVRQATQQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDIMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI +L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQALAGGEFGPITVAEKTDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYQVAGEFIADALTRLGCKVTVKAEGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + + +D+ L+ +++ + + E +++SF + Sbjct: 475 QISLPSMDVKFAKYQDRFELA-------ELRQTIVTLGYQEAISFSFADAKLEKQLNPEV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 + L + NPIS+D++ MR++LL L+ N++R + FE ++ + Sbjct: 528 KPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFEFGLRFDYQNAKSIEDLQ 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 Q A + GS E W K + +D FD K + ++ VS++ +R E Sbjct: 588 QTPTLALVAVGSQAPES----WHAKPQP----MDFFDFKGEVEEILAAGRVSVEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +W HPG+S I + + GY G HP++ + LS + LD + Q + Sbjct: 640 ---AWLHPGQSANILVDGKSI-GYLGRLHPSLENELDLS---TTWVAELDQTAVLQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 LS V+RD+A ++ +I + +I+ L+D +FDV+ G+ + +G Sbjct: 690 YVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEQTGGELLDSTWLFDVYTGQGVEDG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|238898891|ref|YP_002924573.1| phenylalanine tRNA synthetase, beta-subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466651|gb|ACQ68425.1| phenylalanine tRNA synthetase, beta-subunit [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 799 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 255/827 (30%), Positives = 422/827 (51%), Gaps = 52/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MKF+ WL++ + +++ E + + LT GLEVE V+ A PF+ I VL +P+ Sbjct: 1 MKFSEFWLREWVQPEITTEILSEQLTMAGLEVETVE--PAAPPFSGVLIGHVLECHPHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +I G+ + VVCGA N R GL A G+ +P + + K+RG+ S G Sbjct: 59 ADKLKVTKIHLGQDRLCDVVCGAQNCRQGLKVAIATIGAVLP-GSFKIKKTKLRGVLSEG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C+ EL + D I+ELP +AP+G ++L L D I +++TPNR+DC+ + G+A Sbjct: 118 MLCAFDELGIPSDETGIIELPENAPIGMNFREWLHLDDNIFQINVTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 ++ A + +L + + +E I + ++ C + +KG+ P WM+ Sbjct: 178 EI--ATINRLPLLGPNINKVTEKIQEKRWIRVEAPEACPRYLGRVIKGICVKAKTPFWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ GLRSI +VD+TNYV L+ G P H FD +I + VR A GE++ LD + Sbjct: 236 KKLERSGLRSIDPVVDVTNYVLLELGQPLHAFDLEKIKHEIIVRWAKEGEELTLLDGRAL 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+P +VIA ++ ++AGI GG+++G T + +E A + P I + G+ T+ Sbjct: 296 HLNPKTLVIADHTKVLALAGIFGGQNSGITQKTEHLFLESAFFRPTAIVAQARQYGLQTE 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKR 413 + +R+ERGVD Q ++ L++ +CGG I + + K + I + ++ R Sbjct: 356 AAHRYERGVDPQLQYKAIERATQLLIEICGGEVGPIIDVSSPAMLSKTQHITLRSKKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSV------IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 L G + + +L IL+ LGF + G Y + ++ PSWR D+ + D++EEI RIY Sbjct: 416 LLGYQIEFDQALDILQHLGFQIQEKEHTQGAY-RLQLRPPSWRFDIALEEDVIEEIARIY 474 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSR------TRYVKRVLASRAMMEVVNWSFISKEQS 521 G +I P+ K LS+ S TR+ K +L R E + +SF+ + Sbjct: 475 GYHRIPETPI-------KSELSIGSSSQNECALTRF-KTLLTYRGYQEAITYSFVDPKIQ 526 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYEND 579 L + L + NPISADMS MR SLL GLL A N +R +FE + + ++ Sbjct: 527 SLLHPDEDALFLPNPISADMSVMRLSLLTGLLCAVVYNQNRQQTTVRLFESGLRFIPDSS 586 Query: 580 TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 P G Q+++ +G+ G E W S+ +D +D K D ++++ L Sbjct: 587 QPLGVKQEHVLSGMITGQRFPEH----WDFSSQP----LDFYDMKGDLEALLDLSGKLPV 638 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 ++F++ HPG+S + + E + G+ G HP L FE+ + S Sbjct: 639 IQFKTEPHCALHPGQSAALYLNEEKI-GWMGLIHPKCAQALTLKESPLVFEIQWRKLTDS 697 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 T V +S +RD+A IVD+ IPA ++ + V I D+ +FD++QG+ Sbjct: 698 -----VTPCVKKISRFPSNRRDIAIIVDEKIPAEEILKECRKVSVNQIVDINLFDLYQGE 752 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +G KS+AI +++Q + T +D+I + V + KK A LR Sbjct: 753 GVSKGYKSLAISLVLQDSERTLEEDEIAATVSTCVSALKKKFQASLR 799 >gi|125624962|ref|YP_001033445.1| phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris MG1363] gi|124493770|emb|CAL98762.1| phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300071762|gb|ADJ61162.1| phenylalanyl-tRNA synthetase subunit beta [Lactococcus lactis subsp. cremoris NZ9000] Length = 797 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 245/818 (29%), Positives = 438/818 (53%), Gaps = 36/818 (4%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WLK+ + + + ++ +++ G+EVE V + +E LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVPNLTATPAELEQKMSTSGIEVEGVTSPQEGLSKLVVGEVLSSEDIPET 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G + +Q+VCGAPNVRVG+ + A G+ I +N I KIRG+ES GM+ Sbjct: 61 HLHITQVNVGADEALQIVCGAPNVRVGMKVIVALVGARIADNYKIKK-GKIRGVESLGML 119 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ E+ + I E+P DA VG + YL++ D II++S+TPNR+D + + Sbjct: 120 CALDEIGFDEKINPMKHEDGIFEMPADAKVGDSIFPYLDMDDEIIELSITPNRADALSMN 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A +K S +SES+ +I ++ + + + ++GV+ +P Sbjct: 180 GAAWEVGAIYDLPVKLEEKSLVEASESVASKITVKVETDKVPT-YKIRLIEGVKIAKSPQ 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 W++ RL G++ I+ +VD+TNYV + G P H FD ++ SD + VR+A SGEKI LD Sbjct: 239 WLQNRLMNAGVKPINNVVDVTNYVLMAFGQPLHSFDFAKFGSDEILVRQAKSGEKIATLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++V+ ++G ++ G++GG + D TT+V +E AL+D +I ++ + Sbjct: 299 HVERELDDSDIVVTANGLPVALGGVMGGADSEITDETTNVALEAALFDGTSIRKTSQKFA 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + +++ RFE+G++ + L ++I+ L GG + N Y+P K+ S Sbjct: 359 LRSEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGLVESN-DYQPLLPKVSITLS 417 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V G D+ +E +I +LGF V E +KF +PS R D+ +ADLVEE+ RIYG Sbjct: 418 RVNGALGTDLSLETVKKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVARIYGY 477 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D + S LPL+Q + L+ Q R V+ L S + EV+ +S ++ E++ F G Sbjct: 478 DNLPS-TLPLSQ--NAGELTDMQKFRRTVRTGLESSGLNEVIGYSLVTPEKATEFVGELE 534 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 ++ P++ + +R +++PGLL N +R AD AI+E+ +++ P Sbjct: 535 TTSLMMPMTEERQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIF---LPNADDIRPT 591 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + + I SG + + VD + AK +++E + ++ + + A H Sbjct: 592 EVPNLAFAI--SGNVVDKSYNGQAVPVDFYYAKGIVENLLETYEEVEFVPTNNQAA--MH 647 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEVYLDSIPISQKKRTKTKK 706 PGR+ +I + + G+ G+ HP + ++ +V L+ +P +T Sbjct: 648 PGRTAVININGRLA-GFVGQIHPATAKKYDVAETYVASLDMKVMLEELP----AQTIFND 702 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 + + ++H RD+A ++D + +V++IK+ + + V +FD++QGK+L GKKS+ Sbjct: 703 IPKVQAVH---RDIALLIDAEVTHAQIVSVIKSSRVKTLKQVELFDIYQGKNLPAGKKSM 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A + QP ++T DD+I +++I +N+V+K N +R Sbjct: 760 AYSLTFQPAENTMTDDEITAAVNKITKNLVEKLNVEIR 797 >gi|310821385|ref|YP_003953743.1| phenylalanyl-tRNA synthetase subunit beta [Stigmatella aurantiaca DW4/3-1] gi|309394457|gb|ADO71916.1| Phenylalanyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 802 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 261/820 (31%), Positives = 428/820 (52%), Gaps = 34/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK ++ WL D++ ++E++ LT+ GLE+E ++ EAL + ++ ++P+ D Sbjct: 1 MKISVKWLGDYVALP-AVEELARKLTAAGLEIEGMERPGEALQGVVVAQIRESVQHPNAD 59 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G Q +QVVCGA N +VG A G+ +P N + + +RG++S GM+ Sbjct: 60 KLSVTQVDAGGPQLLQVVCGAKNFKVGDKVPLATVGTKLP-NGVEIKQAALRGVDSHGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL LS++S+ ++ LP G ++ L L D +++V++TPNR D + G+A ++ Sbjct: 119 CSSKELGLSEESSGLLILPAGLKPGLPIASALGLDDVVLEVNVTPNRPDALSHLGVAREV 178 Query: 179 -VAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 V G+ + E +S + + ++K ++D C +A V+ V +P W++ Sbjct: 179 GVVTGVAFRPPEPKLS--EAGGATADKVKVRIEDPVRCPRYAARVVENVTIQPSPQWLQD 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEY 295 RLKA G+R+I+ +VD+TNYV+L+ G P H FD +++ + +R A GEKI LD +E Sbjct: 237 RLKACGVRAINNVVDVTNYVNLEYGQPLHAFDLDKVAGQEIVIRCARPGEKIRTLDGKER 296 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D++ I R Q+IAG++GG + T +++E A + ++ RS K G+ T+ Sbjct: 297 TLDADDLAICDRDRAQAIAGVMGGADSEVTGGTKRIVLESANFLASSVRRSSKRHGLHTE 356 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMNSEVKRL 414 + +RFERG DL + P + LI L GGT + + KP R++ + V+++ Sbjct: 357 ASHRFERGADLDAVGPAIDRAAQLIAELSGGTVASGRVDVYPGQKPARRVTLRFARVEKV 416 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G VP + RIL LGF + + + VP R DVE + DL+EEI R++G D I Sbjct: 417 LGTAVPEGECRRILGALGFRGVEDGSAQATFEVPRARVDVEREEDLLEEIARVFGYDNIP 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + LP V + Q R +++ L+ + EVVN+SF++ + GG + + Sbjct: 477 AR-LP-RGVAELAPEPPQAEAERRLRQALSGAGLNEVVNYSFVAPRNLEVLGGKDAPVVL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 +NP+S + S MRTSLLPGLL+ R+V + AI E Y D PEG + R+ Sbjct: 535 VNPLSVEQSVMRTSLLPGLLENLSRSVRHQVERVAIHETGRAYVRD-PEGGQGQRPATRE 593 Query: 594 GSSGIEG------SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG-APS 646 S + G SGR W+ K +D +DAK +V+ + + RFE AP+ Sbjct: 594 VSR-VAGLVWGLRSGRTWTQKDAR----MDFYDAKGAVEAVLHGLRVVGA-RFEPAEAPA 647 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 W HP + + VLG+ GE HP + L + FE LD+ P+ + Sbjct: 648 W-HPRACAQVLLADGTVLGHVGELHPRVTKALELPQGVFAFE--LDTEPLYAA--AQLAP 702 Query: 707 VVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 H L V RDLA +V + + +I V L++D +FDV+ GK + EGKK+ Sbjct: 703 AYHALPRFPAVLRDLAVVVPVELRNDEVRRVILEVGGTLVEDALIFDVYTGKPIPEGKKN 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +A + + + T D ++ RI+ V ++ LR+ Sbjct: 763 LAYAIRYRSQERTLTDGEVGEAHQRIISEVNQRLGGALRA 802 >gi|270307739|ref|YP_003329797.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides sp. VS] gi|270153631|gb|ACZ61469.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides sp. VS] Length = 809 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 269/837 (32%), Positives = 439/837 (52%), Gaps = 61/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD 59 MK L WLK++L D+ ++ + +T G EV +++ + P V +L V R+P+ D Sbjct: 1 MKIPLKWLKEYLPADMPPAELAERMTMAGTEVTVLNSHKDKWPNVYVGLILEVNRHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIES 114 +L ++D G+ QE VV GAPN + G V+A G+ + + + M++ +RG+ES Sbjct: 61 RLVLVKVDWGQGQET-VVTGAPNCKAGDKVVFARIGAVLIDGHNGKEMVLKPAVLRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSE+EL LSD+ I+ LP DAPVG S+YL I+D+ LTPNR D + V G+ Sbjct: 120 CGMVCSERELGLSDEHEGILILPADAPVGMLASEYL--GAIILDLELTPNRGDLMCVTGV 177 Query: 175 ALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 A +L A + +L +IS P + + I +I ++ ++ LC + ++G++ +P Sbjct: 178 AREL-GALIDRLP--SISTPDFKATGKDIKDKINIEIKNTKLCTRYTASLIEGIKIGESP 234 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 +W+++RL A G+R I+ +VD TNYV L+ G P H FD +I S + VR A GE + L Sbjct: 235 DWLKERLIACGMRPINNVVDATNYVMLEFGQPLHSFDYDQIKSKRIIVRPAAEGEVLTTL 294 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E LSPD ++I +I ++AG++GG++ + TT VL+E A +D +I R+ + L Sbjct: 295 DGVERKLSPDMLLITEPDKIIALAGVMGGENTEVTEKTTSVLLESATFDKQSIRRTARVL 354 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + +++ RFE+G+ + LK LIL + GG A+ I + + + IV S Sbjct: 355 KLQSEASARFEKGLSFELAPIALKRATQLILEIAGGQAASGFIDVMPVNKEKKSIVLSLS 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEY-------------DKFEVSVPSWRQDVEEK 456 +V ++ G D D+ +I +RLGF I EY DK + WR D+E Sbjct: 415 KVNQVLGYDREQPDTHKIAKRLGFVWIPEYIPGMEEFGYGSTDDKVRIYPGYWRMDIETD 474 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D++EE+ RI G D I S L L + K + R+++++L+ E++++SF Sbjct: 475 IDMIEEVARIAGYDTIPS--LSLDKAIPKIEIPPLPGMKRFLRQILSGYGFQELISYSFT 532 Query: 517 SKEQ-SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 S+E S + + E L I NP+S++ MRTSL P L + N ++E+ Sbjct: 533 SREMLSRVSSEAESECLAISNPMSSEQEVMRTSLRPSLYASLAANRRFEKDGLRLYELGR 592 Query: 575 VY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD---LFDAKADALSV 628 VY EN+ E + M + GS S W ++ F D + +A L + Sbjct: 593 VYLPKENNKQE-EPEMLCAVLAGS-----SSESWWQRNTSNFDFFDVKGILEAIISRLGL 646 Query: 629 IEPFVSLDSLRFESGAPSWYHPG-RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 FV D E G Y R G ++ +G G+ +P I D F L+ P+ F Sbjct: 647 SADFVISD----EPGLTRGYQASVRVG------DMPVGVLGQVNPQITDKFDLTEPVYMF 696 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDV 747 E+ L + + T +K ++ V+RDLA ++D+ I ++N+I D L+ +V Sbjct: 697 EINLSKL---VTRATARRKFSPINRFPAVERDLALVIDRSITNLQVINMISEYD-LVKNV 752 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD++QGK + E KKS+A ++ Q T +D ++ +M +I+ + +T AVLRS Sbjct: 753 ELFDMYQGKQVAENKKSLAYHLVFQSDTHTLKDAEVDGVMSQILRRLNTETGAVLRS 809 >gi|257792101|ref|YP_003182707.1| phenylalanyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] gi|257475998|gb|ACV56318.1| phenylalanyl-tRNA synthetase, beta subunit [Eggerthella lenta DSM 2243] Length = 812 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 249/831 (29%), Positives = 437/831 (52%), Gaps = 48/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +L WL +++D ++ CD L G VE V+ +A + V + E++PD D Sbjct: 1 MKVSLKWLSEYVDVPSDVKAFCDRLDLTGTGVEAVEKTGDAFDGVVVGYVETCEQHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +Q+VCGAPN+ G+ A G+ +P + + K+RGI S GM Sbjct: 61 HMHVVTVDVGAGEPVQIVCGAPNIAQGIKVPVATIGAVLP-GDFKIKKSKLRGITSCGMC 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS++EL + + I LP DAPVG ++DYL+LSD ++D+ +TPNR DC+ + G+A ++ Sbjct: 120 CSQRELGMGSNHEGIWILPEDAPVGMPIADYLKLSDTVLDLEVTPNRPDCLSMAGMAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A +K I +++ P ++ ++ D+S C + +KGV+ +P+W+ + Sbjct: 180 GAMYRTDVKRPQIDLVEDADATPASDQVSVEIADASRCCRYTARVIKGVQVGPSPDWLAE 239 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-----LTVRRACSGEKILALD 291 R+ A G RSI+ +VD+TNY+ G P H FD +++ + VR A GE+ LD Sbjct: 240 RVAAAGARSINNIVDVTNYILFLLGQPLHAFDFDKLAGADGKAHIVVRPAAEGERFTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++ L PD VIA+ R ++AG++GG + TT VL+E A +D + +R+ +NLG Sbjct: 300 GEDRQLVPDMTVIATPERAVALAGVMGGLETEVTEATTTVLLEAAAFDRAHTSRTSRNLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFM 407 +I++S R+ERGVD + +LI + GG+ D+ + + P + F Sbjct: 360 LISESSMRYERGVDDNPVALNADMAAALIAEVSGGSVCPGMVDVWLEKT---DPIDLEFR 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + G ++P E+ + IL RLG V + D V+ P++R D+E + DL EE++R Sbjct: 417 VPRFCAMMGAEIPREEVVDILSRLGCEVSDADDADVLSVTAPTFRPDLEREIDLYEEVVR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----S 521 ++G+D+I + LP + L+ + + R + + + E + +SF Sbjct: 477 LWGMDRIPAT-LPGGRGRYGTRSQLEHV-SDIIHRTMCASGLNETMTYSFAEPGDLDRLR 534 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---EN 578 + G R +E++NP++AD S MR S++PGL+++ N R + + ++E+ V+ E Sbjct: 535 MSHEGLGRPVELINPLNADQSVMRQSIVPGLMRSVAYNQSRGVKNVQLYEMGAVFFAHEG 594 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + ++ AG+ G+ G G W+ D FD K A+ + ++L L Sbjct: 595 KSQPKERRRLAGVMAGAMGDAG----WNSAPAA----FDFFDGKG-AIENLARELALPKL 645 Query: 639 RFES----GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 RF++ AP PGR+ + S LG+ GE HP +D F + P+ FE+ +D++ Sbjct: 646 RFKALSADEAPH-LQPGRAAAV-LSGGTELGWVGELHPLAVDAFDATAPVVAFELDVDAL 703 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 S + + V + + V D+AF+VD+ + LV + + +L++DV +FDV+ Sbjct: 704 AKSAR---PARDYVDVPTFPAVSMDVAFVVDEGVTHERLVQCMTSAGGKLLEDVRLFDVY 760 Query: 754 QGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + ++ +G GKKS+A + + T +++ +R+V+ V T A +R Sbjct: 761 RDEARVGAGKKSMAYALTYRAADRTLTSEEVDKAHERLVKKVSSATGAEVR 811 >gi|312795977|ref|YP_004028899.1| phenylalanyl-tRNA synthetase beta chain [Burkholderia rhizoxinica HKI 454] gi|312167752|emb|CBW74755.1| Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20) [Burkholderia rhizoxinica HKI 454] Length = 822 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 269/844 (31%), Positives = 425/844 (50%), Gaps = 64/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D +S E + LT GLEVE+ S + KVL V ++P+ D Sbjct: 1 MQFAESWLRSFVDPQLSTEALSHALTMAGLEVEEWAPVAPPTSKIVVGKVLEVVKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRKIRGIE 113 + ++D G Q + +VCGAPNV G+ A G+ +P + + K+RG+E Sbjct: 61 KLNVCQVDAGTGQTLTIVCGAPNVVPGIKVPTALVGATLPPAQAGGAPFEIKLSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL LSDD + ++ LP D +G + D L+L D I ++ LTPN++DC+ V G Sbjct: 121 SQGMLCSARELKLSDDHSGLLVLPDDTLIGRDIRDVLQLDDIIFEIKLTPNKADCLSVFG 180 Query: 174 IALDLVAAGLGKLKEINISCPLSSESI-PLEIKFD------LDDSSLCKGFAMCCVKGVR 226 IA + A PL++ S P+ + D ++ LC F+ ++ V Sbjct: 181 IARETAAI---------TGAPLNAPSYHPVPVTCDARLPVRIEAPQLCGRFSGRVIRNVD 231 Query: 227 NNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 + P WM QRL+ G RSISALVDI+NYV L+ G PSH+FD +I+ L VR GE Sbjct: 232 ARASTPAWMVQRLERAGQRSISALVDISNYVMLELGRPSHIFDLDKINGGLHVRWGKRGE 291 Query: 286 KILALDNQEYDLSPDNVVIASD-GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 + L+ +L VIA D GR++S+AGI+GG +T + +E A W P +I Sbjct: 292 TLKLLNGNTIELDETVGVIADDQGRVESLAGIMGGDSTAVTLDTRHIYLEAAFWWPDSIR 351 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RK 403 + TD+ +RFERGVD + ++++ LI ++CGG A + +I P RK Sbjct: 352 GRARQYNFSTDAAHRFERGVDYATTVEHIEYLTHLITTICGGDAGP--VDDHIVNLPQRK 409 Query: 404 IVFMN-SEVKRLSGIDVPIEDSLRILERLG--FSVIGEYDKFEVSVPSWRQDVEEKADLV 460 V M S R+ G+ + + I RL F + D F V+ P++R D+E + DL+ Sbjct: 410 PVSMRVSRANRIIGVPIEANEIASIFTRLNLSFERAADGDTFIVTPPTYRFDIEIEEDLI 469 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RI+G ++I + P+ E ++S ++R LA+R E VN+SF+ E Sbjct: 470 EEVARIHGFEKIPAR-APIATNEMHATNEARRS-VHALRRALAARDYAETVNFSFVDAEW 527 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND- 579 F G +R + +LNPI++ +S MR++L L+ N++R +FE V+ D Sbjct: 528 ERDFAGNERPVALLNPIASQLSVMRSTLFGSLIGVLQHNLNRRAERVRVFEAGRVFRADP 587 Query: 580 -TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 +G+ + + G G + ++ R VD FD K D ++ P V Sbjct: 588 TVKDGELTVEGFAQPKMIGALAYGPVVDEQWGVSVRHVDFFDVKGDVQALFAPTVP---- 643 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 RF + HPGRS I+ + IV G+ GE HP L + L + FEV D++ Sbjct: 644 RFTRASHPALHPGRSAQIEINGRIV-GWIGELHPRWLQKYDLPHAPVLFEVEADAV---- 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN------IIKNVDRLIDDVTVFDV 752 V +S PV+RD+A +V QH+ ++++ I + R + + +FD Sbjct: 699 -AGRALPVVTEISKFPPVRRDIALVVPQHVEVQSILDEFAQARIGNDALRFVQKMVLFDE 757 Query: 753 FQ----GKSLGEG---------KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 F+ K +G G +KS+A +V +Q T +D+ + + + +VE + + Sbjct: 758 FRPKFDAKQIGSGAVSGGLSADEKSLAFRVTLQDTGGTLQDETVDLAVKTLVERLARVFG 817 Query: 800 AVLR 803 A LR Sbjct: 818 ARLR 821 >gi|170701127|ref|ZP_02892101.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] gi|170133949|gb|EDT02303.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia ambifaria IOP40-10] Length = 809 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 264/821 (32%), Positives = 414/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNV------RVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVLPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + A L ++I P+ E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIR-PVRVELDETLPVRIAA----PDLCGRFSGRVIRGVNAHA 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 235 KTPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLK 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +L VIA D ++S+AGI+GG +TT++ +E A W P +I + Sbjct: 295 LLNGNTVELDETVGVIADDRHVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRAR 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD + ++ I LIL +CGG A I + + R V M Sbjct: 355 KYNFSTDAAHRFERGVDYATTVEHVERITQLILEICGGKAGPID-DQAVNLPQRAPVKMR 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIY Sbjct: 414 VSRANRIIGVKIDADEIADIFTRLGLPFERDDDAFLVTPPSHRFDIEIEEDLIEEVARIY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 474 GFEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 + +LNPI++ +S MRT+L L+ N++R +FE V+ D G+ Sbjct: 532 DTPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLADPSVKAGEL 591 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + G G ++ R VD FD K D ++ ++ + RF Sbjct: 592 TVEGYTQPKRVGALAYGPAVDEQWGVATRAVDFFDVKGDLEAL----LAPAAARFVKAEH 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ I++ T Sbjct: 648 PALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDADAL-IARALPAPTD 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS--- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 706 ----VSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEDACRFVQKVVLFDEFRAKSNTS 761 Query: 758 --LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 762 GGLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVERMAR 802 >gi|147668993|ref|YP_001213811.1| phenylalanyl-tRNA synthetase beta subunit [Dehalococcoides sp. BAV1] gi|146269941|gb|ABQ16933.1| phenylalanyl-tRNA synthetase beta subunit [Dehalococcoides sp. BAV1] Length = 809 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 262/834 (31%), Positives = 437/834 (52%), Gaps = 55/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK L WLK++L TD+ ++ + +T G EV +++ + P V +++ V R+P+ D Sbjct: 1 MKIPLKWLKEYLPTDIQPAELAERMTMAGTEVTVLNSHKDKWPNVYVGQIMEVNRHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIES 114 +L ++D G+ QE VV GAPN +VG V+A G+ + + + +++ +RG+ES Sbjct: 61 RLVLVKVDWGQGQET-VVTGAPNCKVGDKVVFARTGAVLIDGHNGKEIVLKPAVLRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSE+EL LSD+ I+ LP DA VG S+YL + I+D+ LTPNR D + V G+ Sbjct: 120 CGMVCSERELGLSDEHEGILVLPADALVGMLASEYL--GEVILDLELTPNRGDLMCVTGV 177 Query: 175 ALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A +L A + +L I + + I +I+ ++++S LC + ++G++ +P+W Sbjct: 178 AREL-GALIDRLPAISDPDFKATGPDIKEKIEIEINNSKLCTRYTASLIEGIKLGESPDW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 +++RL A G+R I+ +VD TNYV L+ G P H FD +I S + VR A GE + LD Sbjct: 237 LKERLIACGMRPINNVVDATNYVMLEFGQPLHAFDYDQIKSRHIIVRPAAEGEVLTTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E LSPD ++I RI ++AG++GG++ + T+ +L+E A +D +I ++ + L + Sbjct: 297 VERKLSPDMLLITEPDRIIALAGVMGGENTEVTEKTSRILLESATFDKQSIRKTARGLKL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-IVFMNSEV 411 +++ RFE+G+ + LK LIL + GG A+ I K R IV ++V Sbjct: 357 QSEASARFEKGLSYELAPIALKRATQLILEIAGGQAASGLIDVLPNKKERNGIVLSLAKV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEY-------------DKFEVSVPSWRQDVEEKAD 458 ++ G + D+ +I +RLGF + EY D + WR D+E D Sbjct: 417 NQILGYEKEPPDACKIAKRLGFIWLPEYVPGMEEFGYGATEDMVRIYPGYWRMDIETDID 476 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++EE+ RI G I LPL + K R+++++L+ E++++SF S+ Sbjct: 477 MIEEVARIAGYHTIPC--LPLDKAIPKIETPPLPGMKRFLRQILSGYGFQELISYSFTSR 534 Query: 519 EQ-SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S + G + E L I NP+S++ MRTSL P L + N ++E+ VY Sbjct: 535 EMLSRVSSGAEPEFLAISNPMSSEQEVMRTSLRPSLYASLAANRRFEKDGLRLYELGRVY 594 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN E + + A I GSS + + D FD K ++E V Sbjct: 595 LPKENKKQEEPEMLCAVIAGGSS---------QSRWQRNTAGFDFFDVKG----IVESMV 641 Query: 634 SLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 S L + S H ++GI+ ++ +G G+ P I D F ++ P+ FE+ Sbjct: 642 SRLGLSADFVVSHEHGLSHGYQAGIL--VGDMPVGILGQVSPQIADIFDITEPVYMFEIN 699 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF 750 L + R K + + V+RDLA ++D+HI +++I+ D L+ + +F Sbjct: 700 LSKLITRAMVRRKFNPINRFPA---VERDLALVIDRHITNRQVIDILSEYD-LVKNAELF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D++QGK + E KKS+A +L Q T +D ++ +M +I+ + +T AVLRS Sbjct: 756 DMYQGKQIAENKKSLAYHLLFQSDTHTLKDAEVDGVMSQILGRLNTETGAVLRS 809 >gi|326407481|gb|ADZ64552.1| phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. lactis CV56] Length = 797 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 250/827 (30%), Positives = 442/827 (53%), Gaps = 54/827 (6%) Query: 1 MKFTLSWLKDHLD----TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERN 55 M+ + WLK+ + T LE+ +++ G+EVE V + E LS + ++LS E Sbjct: 1 MQVSYKWLKELVPNLRATSAELEQ---KMSTSGIEVEGVTSPMEGLSKLVVGEILSSEDI 57 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 PD I +++ G + +Q+VCGAPNVRVG+ + A G+ I +N I KIRG+ES Sbjct: 58 PDTHLHITQVNVGAEESLQIVCGAPNVRVGMKVIVALVGARIADNYKIKK-GKIRGVESL 116 Query: 116 GMMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+C+ E+ + + I E+P DA VG + YL++ D II++S+TPNR+D + Sbjct: 117 GMLCALDEIGIDEKINPMKHEDGIFEMPADAKVGDSIFSYLDMDDEIIELSITPNRADAL 176 Query: 170 GVRGIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A ++ A GL +L++ ++ S + + +K + D + + ++GV+ Sbjct: 177 SMHGAAWEVGAIYGLPVQLEKKDLVEASESAASKIAVKVETDK---VPTYKIRLIEGVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ RL G++ I+ +VD+TNYV + G P + FD S+ SD + VR+A +GEK Sbjct: 234 AKSPQWLQNRLMNAGVKPINNVVDVTNYVLMAFGQPLYSFDFSKFGSDEILVRQAKAGEK 293 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+ E +L ++V+ ++G ++ G++GG + D TT V +E AL+D +I ++ Sbjct: 294 MTTLDHVERELDDSDIVVTANGLPVALGGVMGGADSEITDETTSVALEAALFDGTSIRKT 353 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKI 404 + + +++ RFE+G++ + L ++I+ L GG + N Y+P K+ Sbjct: 354 SQKFALRSEASSRFEKGINEGTVREALDFAAAMIVELAGGKVLSGVVESN-DYQPILPKV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S V G D+ +E +I +LGF V E +KF +PS R D+ +ADLVEE+ Sbjct: 413 SITLSRVNSALGTDLSLETVEKIFVQLGFGVEVEGEKFTCEIPSRRWDIHIEADLVEEVA 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D + S LP +Q + L+ Q R V+ L S + EV+ +S ++ E++ F Sbjct: 473 RIYGYDNLPS-TLPSSQ--NAGELTQMQKFRRTVRTGLESSGLNEVIGYSLVTPEKATEF 529 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 G ++ P++ D +R +++PGLL N +R AD AI+E+ +++ ++ Sbjct: 530 VGQLETTTLMMPMTEDRQTLRANMIPGLLDIVNYNQNRKNADVAIYEIGNIFLPNPDDIR 589 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +A I SG + + VD + AK +++E + ++ + Sbjct: 590 PIEVPNLAFAI---------SGNVVDKSYNGQAVPVDFYYAKGIVENLLEAYKEVEFI-- 638 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEVYLDSIPIS 697 S + HPGR+ +IK + V G+ G+ HP + ++ +V L+ +P + Sbjct: 639 PSNNQAAMHPGRTAVIKINGR-VAGFVGQIHPATAKKYDIAETYVAGLDMQVMLEELP-A 696 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 Q T KV V RD+A ++D + +V++IK+ + + V +FD++QGK Sbjct: 697 QTIFTDIPKV------QAVHRDIALLIDAEVTHAQIVSVIKSSRVKTLSQVELFDIYQGK 750 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +L GKKS+A + QP+++T D++I +++I +N+V+K + +R Sbjct: 751 NLPAGKKSMAYSLTFQPVENTMTDEEITAAVNKITKNLVEKLDIEIR 797 >gi|226954297|ref|ZP_03824761.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter sp. ATCC 27244] gi|226834968|gb|EEH67351.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter sp. ATCC 27244] Length = 793 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 257/823 (31%), Positives = 423/823 (51%), Gaps = 48/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSNTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVRVG+ A G+ +P + + K+RGIES G Sbjct: 59 ADRLRVTTVNVGSGEPLQIVCGAPNVRVGMKAPVATIGAVLP-GDFKIKKGKLRGIESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGMNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN-NV---APN 232 ++ K+ E +I + +P I + +G + ++N NV P Sbjct: 178 EIAVINQLKMNEPDI------QPVPATITDEKAVIITTEGTPRYLGRIIKNVNVKAPTPE 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM Q L G+R+ S LVDITNYV L+ G P H FD ++I + VR+A EK++ L++ Sbjct: 232 WMEQALAHSGIRTHSILVDITNYVLLELGQPMHAFDLTKIKGSIQVRQAQPKEKLMLLND 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L D +VIA D + +IAGI+GG + D T D+ +E A + P+ IA + G+ Sbjct: 292 QEVELQDDIMVIADDQKALAIAGIMGGLDSSVTDETQDIFLESAFFAPLAIAGRARRFGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS R+ERGVD + I + LI + GG I +A + P + I ++ Sbjct: 352 HTDSSQRYERGVDFELPIIAMHRACELIQTFAGGEFGPITVAEQVALLPTREAIQLKQAQ 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G +V + L RLG V ++ V PS R D+ DLVEE+ RI+G Sbjct: 412 VDQLLGYEVAGDFIADALMRLGCVVETTAQGEWNVIPPSHRYDIAIYQDLVEEVARIHGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRY----VKRVLASRAMMEVVNWSFISKEQSVLFG 525 D I+ LP K ++ L++ + R+ +++ +A+ E +++SF + Sbjct: 472 DNIQIS-LP------KIDVKLEKYQDRFEIAQLRQTVATLGYQEAISFSFADAKLEKQLN 524 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + L + NPIS+D++ MR++LL L+ N++R FE+ ++ +G K Sbjct: 525 PAVQPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQHRVRFFELGLRFDY---QGAK 581 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FESG 643 + + + + G L + + + +D FD K + IE ++ ++ F Sbjct: 582 DIHDLKQIPTLALIAVGSLAPESWHVKPQAMDFFDFKGE----IEEILAAGRVKAEFART 637 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +W HPG+S I + + + GY G HP++ + L + LD + Q + Sbjct: 638 QRAWLHPGQSAEILVNGQSI-GYLGRLHPSLENDLDLG---TTWVAELDQQAVLQ---SY 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 LS V+RD+A ++ +I + +I+ L+D +FDV+ G+ + +GK Sbjct: 691 VSNFTELSRFPSVRRDIALLISDNIEVKDIQRMIEQTGGELLDSTWLFDVYTGQGVEQGK 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 751 RSLAFALLWQHPARTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|56475893|ref|YP_157482.1| phenylalanyl-tRNA synthetase subunit beta [Aromatoleum aromaticum EbN1] gi|66773854|sp|Q5P7Y0|SYFB_AZOSE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56311936|emb|CAI06581.1| phenylalanyl-tRNA synthetase beta chain [Aromatoleum aromaticum EbN1] Length = 792 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 266/820 (32%), Positives = 436/820 (53%), Gaps = 52/820 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F+ WL+ ++ + E + LT GLEVE+ A S + +++ E++P+ D Sbjct: 1 MQFSEHWLRSLVNPPLDSESLGHLLTMAGLEVEEAVPAAAAFSGVVVGRIIEAEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPN GL A G+ +P + K+RG+ES GM+ Sbjct: 61 KLKLCKVDVGQDELLQIVCGAPNAAAGLRVPCAMVGAKLP--GFDIKAAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LSDD ++ELP +AP+G + ++L L D + + LTPNRSDC+ + G+A + Sbjct: 119 CSARELGLSDDHGGLLELPDNAPIGQDIRNFLALDDTLFTIKLTPNRSDCLSLAGVARE- 177 Query: 179 VAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 VAA G+ L +I P + P+ LD C + V+GV P+WM Sbjct: 178 VAALTGQPFALPQIEAVVPAIDDRRPVV----LDAPDGCPRYCSRIVRGVDAKAPTPDWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +QRL+ G+RSISALVD+TNYV L+ G P H FD +++ + VR +GEK+L L+ Q Sbjct: 234 KQRLQRSGVRSISALVDVTNYVMLELGQPLHAFDNAKLVGAIHVRYPHAGEKVLLLNEQT 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + D ++IA + R ++AGI+GG+ +G +T DV +E A + P IA ++ G ++ Sbjct: 294 VVPAADTLLIADEARALALAGIMGGEDSGITLDTVDVFLESAFFAPAAIAGRARSYGFVS 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITYKPRKIVFMNSEVK 412 D+ +RFERGVD + ++ LIL +CGGTA +D +A++ + + + + Sbjct: 354 DASHRFERGVDFELPARAIERATRLILDICGGTAGPADETVAKDHLPERPAVRLRPARAR 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL GID+ + +R+LE + SV E D V+ PS+R D+E + DL+EE+ R++G D I Sbjct: 414 RLLGIDLGDDAIVRLLEGVHLSVEREGDALLVTPPSFRFDIEIEEDLIEEVARLHGYDAI 473 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + P + D+ + R+ + V+ +LA+R EVVN++F+ + F Sbjct: 474 PACAPQGSLMMLDRS----ESGRSAWDVRHLLAARDFQEVVNYAFVEEAWERDFCANAEP 529 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG------- 583 + + NPI++ MS MR+SL+PGL N R A +FE+ +E +G Sbjct: 530 IRLANPIASQMSVMRSSLIPGLAANLVANRKRQQARVRVFEIGRCFERKA-DGEPVAGFQ 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q AG+ G + E W S R VD +D K+D +E + +L FE Sbjct: 589 QPLRVAGLAAGLALPEQ----WGAAS----RQVDFYDVKSD----VEALFAPRALGFERL 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ I + G GE HP + + + FE+ LD+ ++ + Sbjct: 637 SDPALHPGRAASILLDGRRI-GLLGEIHPVWVQRYEMGTAPVVFEIELDAALLADLPAYR 695 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 +S V RD+A +V+Q + A ++ +++ ++ + +FD++ GK + GK Sbjct: 696 -----EISRQPAVTRDVALVVEQALTAARVIEVMQEAAPTIVMGMELFDIYHGKGIDPGK 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 KS+A +VL+Q + T D ++ D VE +V+ T L Sbjct: 751 KSLAFRVLMQDTQRTLEDAEV----DAAVEAIVRHTETSL 786 >gi|172060456|ref|YP_001808108.1| phenylalanyl-tRNA synthetase subunit beta [Burkholderia ambifaria MC40-6] gi|171992973|gb|ACB63892.1| phenylalanyl-tRNA synthetase, beta subunit [Burkholderia ambifaria MC40-6] Length = 809 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 261/820 (31%), Positives = 410/820 (50%), Gaps = 42/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+F SWL+ +D ++ +++ LT GLEVE + S + +VL V ++PD D Sbjct: 1 MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +VCGAPNV V L+G PP + + K+RG+ Sbjct: 61 KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEE-GGKPFAIKLSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ++ LP D PVG + D L L D I ++ LTPN++DC+ V Sbjct: 120 ESQGMLCSARELKLSEDHSGLLILPEDTPVGQDIRDTLNLDDTIFEIKLTPNKADCLSVF 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 GIA + A L ++I E++P+ I LC F+ ++GV + Sbjct: 180 GIARETAAITGAPLTPVDIRTVRVELDETLPVRIAA----PDLCGRFSGRVIRGVNAHAK 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL+ G RS+SALVDI+NYV + G PSHVFD +I + VR GE + Sbjct: 236 TPQWMVERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ +L VIA D ++S+AGI+GG +TT++ +E A W P +I + Sbjct: 296 LNGNTVELDETVGVIADDRHVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARK 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 TD+ +RFERGVD + ++ I LIL++CGG A I + + R V M Sbjct: 356 YNFSTDAAHRFERGVDYATTVEHVERITQLILAICGGKAGPID-DQAVNLPQRAPVKMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S R+ G+ + ++ I RLG + D F V+ PS R D+E + DL+EE+ RIYG Sbjct: 415 SRANRIIGVKIDADEIADIFTRLGLPFERDDDAFLVTPPSHRFDIEIEEDLIEEVARIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I + P P+ E + Q+S ++ LA+R E VN+SF+ E F G Sbjct: 475 FEKIPARP-PVATSEMRATNETQRS-IHDIRHALAARDYAETVNFSFVDAEWEHDFAGND 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP--EGQKY 586 + +LNPI++ +S MRT+L L+ N++R +FE V+ D+ G+ Sbjct: 533 NPIRLLNPIASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLADSSVKAGELT 592 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + G G ++ R VD FD K D ++ ++ + RF Sbjct: 593 VEGYTQPKRVGALAYGPAVDEQWGVATRAVDFFDVKGDLEAL----LAPAAARFVKAEHP 648 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I+ V G+ GE HP ++ + L + FE+ D++ Sbjct: 649 ALHPGRSARIEVDGRAV-GWIGELHPRLMQKYELPHAPVMFEIDTDAL-----TARALPA 702 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGKS---- 757 +S PV+RD+A +VDQ + L + +K + R + V +FD F+ KS Sbjct: 703 PTDVSKFPPVRRDIAVVVDQAVEVQALFDEMKKALAEDACRFVQKVVLFDEFRAKSNTSG 762 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 L +KS+A +V +Q T +D+ + + +VE + + Sbjct: 763 GLAAHEKSLAFRVTLQDPAGTLQDEVVDQAIQTLVERMAR 802 >gi|332529090|ref|ZP_08405054.1| phenylalanyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] gi|332041313|gb|EGI77675.1| phenylalanyl-tRNA synthetase subunit beta [Hylemonella gracilis ATCC 19624] Length = 819 Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 255/840 (30%), Positives = 425/840 (50%), Gaps = 57/840 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL++ + +S +++ DTLT GLEVE++ PFT V V ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLSTQQLADTLTMAGLEVEELT--PVAPPFTKVVVAEIKEAVQHPN 58 Query: 58 LD-CAILRIDTGKHQE---IQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVR 107 D I ++D G + + +VCGAPN R G L+G PP + + Sbjct: 59 ADRLRICQVDIGSAGQGTLLNIVCGAPNARAGIKIPCALVGAELPPADDGDGKPFQIKLG 118 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 K+RG+ES GM+CS +EL LS D ++ELP DAP+G + +YL+L D + + LTPN + Sbjct: 119 KLRGVESQGMLCSARELKLSQDHGGLLELPADAPLGQDIREYLKLDDMLFTLKLTPNLAH 178 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 C+ V G+A ++ A LK I+ + +K D LC F+ V+ V Sbjct: 179 CLSVYGVAREVAALTGAPLKTPVIAAVVPKIQDVQPVKVSAPD--LCGRFSGRIVRNVNT 236 Query: 228 NVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 A P WM RL G RS++ALVDI+NYV + G PSH+FD +I + VR GE+ Sbjct: 237 KAATPQWMVDRLARCGQRSVTALVDISNYVMFEYGRPSHIFDLDKIHGAMDVRWGRPGEQ 296 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ + + VIA D ++S+AGI+GG D+T +V VE A W P IA Sbjct: 297 LKLLNGNTVTVDGEVGVIADDQALESLAGIMGGDATAVSDDTKNVYVEAAFWWPKAIAGR 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + TD+ +RFERGVD + + ++ I LI+ +C GT +C + +PR V Sbjct: 357 SRRYNFATDAGHRFERGVDPELTVAHIERITQLIVEIC-GTPETVCGPID-DQQPRMPVA 414 Query: 407 MNSEVK-----RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 ++ ++ G+ + + L+RLG S++ V+ P +R D++ + DL+E Sbjct: 415 QPVRLRVARAAKVIGMPLTQAQCVDALKRLGLSLVEGEGVITVTPPLYRFDLQLEEDLIE 474 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+ R+ G + + P P V ++ Q+S V+R+LA E +N+SF+ + Sbjct: 475 EVARLIGYEHLPHTP-PQAPVTPQQRPEAQRS-PHAVRRLLAVLGYQETINYSFVEERWE 532 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 G + +++LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 533 RELAGNSQPIKLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVRVFELGRVFMRDAS 592 Query: 582 EGQKYMA-AGIRK-----GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 +++ AG + G + G WS + R VD +D K + +++ P ++ Sbjct: 593 VQDSHVSVAGFDQPMRLAGLAAGPVDGLQWSGAT----RPVDFYDVKGEVEALLAPRQAV 648 Query: 636 DSLRFESGAPSWYHPGRSG--IIKTSAEI-VLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 FE HPGRS ++K++ + +G+ GE HP + LS FE+ LD Sbjct: 649 ----FEPAEHPALHPGRSARVLLKSARGLEPIGFVGELHPRWKQAYELSMTPVLFELALD 704 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVF 750 ++ + + +S V+RDLA IV Q + L+ I+ L+ D +F Sbjct: 705 AV-----QARDVPALRPMSKFQAVERDLAIIVAQDVTHAALMRAIQAAPTAGLLRDAVLF 759 Query: 751 DVFQGK------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D+++ K L + +KS+A+++ + T D+ + + ++ ++ ++ +A LR+ Sbjct: 760 DIYRAKPGQMSAGLADNEKSLAVRLTFSDTEATLTDEQVDTAVQAVLASLQQQLSARLRA 819 >gi|226330392|ref|ZP_03805910.1| hypothetical protein PROPEN_04310 [Proteus penneri ATCC 35198] gi|225201187|gb|EEG83541.1| hypothetical protein PROPEN_04310 [Proteus penneri ATCC 35198] Length = 795 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 260/818 (31%), Positives = 424/818 (51%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S E++ + LT GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSEELSEQLTMAGLEVDGVEAVAGDFHGVFVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S++ I+ELP DAP+G + +YL+L+D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISENHEGIIELPADAPIGMDIREYLKLNDNAIEISVTPNRADCLGILGVARDI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS---LCKGFAMCCVKGVRNNVAPNWMR 235 + + ++S +++ S ++ + ++ L + F VK P W++ Sbjct: 180 AVINKMECQVPDMSPVVATSSATFPVRVEAPEACPRYLGRVFTNINVKAK----TPLWIQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITN + L+ G P H FD R+ + VR EK+ LD E Sbjct: 236 EKLRRGGIRSIDPIVDITNLILLEMGQPLHAFDLDRVEGAVVVRMGKEDEKLTLLDGNEI 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L D +VIA + + +AGI GG+ +G ++ T +V +E A + P++I + G+ TD Sbjct: 296 TLKEDVLVIADEKQALGMAGIFGGESSGVNEETKNVFLECAFFSPLSITGRARRYGLHTD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +RFERGVD + ++ L+L +CGG ++ N + P + ++ R Sbjct: 356 ASHRFERGVDSELQYKAIERATKLLLEICGGEVGEVIDVTNKAHLPNIAPVKLTRKKLDR 415 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G + L L RLGF V E D + VPSWR DV+ + DL+EE+ RIYG + I Sbjct: 416 LLGHVIDDAQVLDSLTRLGFKVSVESDGWLAIVPSWRFDVQIEEDLIEEVARIYGYNNIP 475 Query: 474 SEPLPLTQV---EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 PL V + NLSL++ VK +L E + +SF+ + L + Sbjct: 476 DVPLRADLVMTNHREANLSLKR-----VKTMLVDNGFQEAITYSFVDPKIQSLLHPNEEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + NPISADMS MR SLL GLL T N +R + +FE + V +N G Q+ Sbjct: 531 LILPNPISADMSAMRLSLLTGLLTTTVYNQNRQQSRVRLFEAGLRFVPDNQAEYGIRQEL 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M AG+ G+ E WS + + VD FD K + S++E LD + F+ S Sbjct: 591 MLAGVIAGNRYEEH----WSLEKQT----VDFFDLKGNIESILELTGQLDEITFKPANHS 642 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I E + G G HP + L+ FE+ ++I + K Sbjct: 643 ALHPGQSAGIYLRNEYI-GCIGVVHPELERKLDLNGRTVVFEIRWNAIANRSLPQAKA-- 699 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V ++ A ++ K V I + +FDV+ GK + EG KS+ Sbjct: 700 ---ISRYPSNRRDIAVVVPNNVAAEDILAECKKVGGNQIVGINLFDVYCGKGVAEGYKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q ++ T +D+I + V + ++ A LR Sbjct: 757 AISIILQDIEHTLEEDEIAATVSNCVAALKQRFQASLR 794 >gi|315649013|ref|ZP_07902107.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus vortex V453] gi|315275694|gb|EFU39048.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus vortex V453] Length = 816 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 256/832 (30%), Positives = 434/832 (52%), Gaps = 46/832 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M+ + WL D++ + V+ E + +TS G+E++ ++ R + ++ + V S E++PD Sbjct: 1 MRVSTDWLSDYISLEGVTSEDLASRITSAGIEIDVIEKRNQGINKVVVGYVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ ++IQ+VCGA NV G A G+ +P M + K+RG+ S GM Sbjct: 61 DKLNVCIVDAGQEEDIQIVCGAKNVDAGQKVPVALVGAKLP-GGMDIKKAKLRGVLSQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP + +G + D L L+D I+++ LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKELQEGILVLPAETEIGKPIVDVLGLNDEILELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G A + V+A LG+ E+++ P ++ I + + C +A + GVR Sbjct: 180 LGAAYE-VSAILGR--ELSLPNPEKEVMEVHDTAADHISVTIGAAEQCSHYAARYITGVR 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM+ RL A G+R I+ +VDITNYV L+ G P H FDA + D + VR A +GE Sbjct: 237 IAPSPLWMQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADHLKDGAVHVRMAEAGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD E L P +VI + G+ ++AG++GG + D T ++L+E A +D + + Sbjct: 297 TMVTLDGAERRLEPHMLVITAGGKPVALAGVMGGLDSEVTDGTVNILLESAKFDGGTVRK 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKI 404 + + LG+ +++ RFE+ VD +IP L +L+ G I A + +P I Sbjct: 357 TSRQLGLRSEASSRFEKEVDPAAVIPALNRAAALMAKYADGAVHQGIVEAGSAHAEPTVI 416 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEE 462 ++ R G ++ + + I RL F G+ + +V VPS R D+ DL+EE Sbjct: 417 TLSLEKLNRYLGTELSLLEVKTIFSRLHFPS-GDAGQGLVDVQVPSRRGDIVLDVDLIEE 475 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 + R+YG D I P T +E +L+ Q+ R ++R+L EV+ +SFI + Sbjct: 476 VARLYGYDNI-----PTTAIEGPTTPGSLTKAQAIRRSLRRLLTHSGFQEVLGYSFIHPQ 530 Query: 520 QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 Q+ +F E +++ P+S D S +RTSLLP LL N +R D A+FE+ +++ Sbjct: 531 QAEMFTSLASEGTAVKLAMPMSEDRSVLRTSLLPQLLDIAVYNHNRKQPDLALFEIGNLF 590 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSL 635 T E + + + G+ +GR + + + VD FD K +V++ + + Sbjct: 591 H--TLE-ETLTKQPLERPVLGLLMTGRKGNKQWNVQPAKVDFFDLKGALETVLDYLGIRV 647 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSA---EIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + + + +P +HPGRS + T + +LG G+ HP L + E+ L+ Sbjct: 648 EDITYVANSPEGFHPGRSASVYTGQGENQQLLGVLGQIHPKTQQELDLEDTYAA-EILLE 706 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 + R + + + +RDLA +VD+ + AG+L+ +IK N L+ + VFD Sbjct: 707 PLYDLTNARVAYRDLPRFPGM---ERDLAIVVDEQVEAGSLIQVIKENAGELLQQIQVFD 763 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VF G LGEGKKSVAI + + + T D+++ + ++ V + + A LR Sbjct: 764 VFTGSKLGEGKKSVAISLTYRHQERTLTDEEVAEVTEKAVSALQQTFGAELR 815 >gi|77164654|ref|YP_343179.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosococcus oceani ATCC 19707] gi|254434820|ref|ZP_05048328.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] gi|91208122|sp|Q3JBZ7|SYFB_NITOC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|76882968|gb|ABA57649.1| phenylalanyl-tRNA synthetase beta subunit [Nitrosococcus oceani ATCC 19707] gi|207091153|gb|EDZ68424.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosococcus oceani AFC27] Length = 793 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 256/824 (31%), Positives = 424/824 (51%), Gaps = 53/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK---VLSVERNPD 57 MKF+ +WL+ +D D+S E + + LT GLEVE + A PF VK +++VE +P Sbjct: 1 MKFSEAWLRTWVDPDISRETLVERLTLAGLEVESTEPVAA--PFKGVKAARIVAVEPHPS 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPP---GSCIPENNMIVNVRKIRGIE 113 + ++D G + VVCGAPN R GL WAP G+ +P + + + K++G+E Sbjct: 59 APRLQVCQVDIGSGSLLTVVCGAPNARAGL---WAPLAIIGAQLP-AGIRIELAKLQGVE 114 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS EL L++ SA ++ELP G L ++L+ D I+V LTPNRSDC+ V G Sbjct: 115 SFGMLCSAAELGLAEQSAGLLELPEGDFPGVDLHEFLQFDDISIEVDLTPNRSDCLSVAG 174 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEI----KFDLDDSSLCKGFAMCCVKGVRNNV 229 IA ++ G L + ++ P + E + +I + + C + ++GV Sbjct: 175 IAREV-----GVLTQSPVTEP-AIEPVTAQIGDIFPVTVTAPAACPRYLGRVLRGVNPQT 228 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P W+R+RL+ G+RS+ +VD+TNYV L+ G P H FD R+ + VR + E + Sbjct: 229 QTPWWLRERLRRSGIRSLGLVVDVTNYVMLELGQPMHAFDLERLKGGIQVRYGQADEALT 288 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD L + ++IA R ++AGI+GG+ +G ++ T + +E A ++P IA + Sbjct: 289 LLDGTHLRLDEETLIIADQQRALALAGIMGGEESGINNQTRHLFLESAFFNPSVIAGRAR 348 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVF 406 G+ TDS +RFERGVD + ++ +L+L + GG A + + + P + I+ Sbjct: 349 FYGLHTDSSHRFERGVDPELPRRAMERATALLLEIAGGQAGPVIEVADSSQLPPQATIIL 408 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + R+ G+++ L RLG V + +EV VPS+R D+ + DL+EE+ R+ Sbjct: 409 RKARIHRVLGVEIAESRITEQLTRLGLKVERIEEGWEVKVPSFRFDLALEVDLIEELGRL 468 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D++ S P+ Q++ R +++VL R E + +SF+ +E L Sbjct: 469 YGYDRLPST-RPVGQIQPVLKTEAGAFIDR-IRQVLVDRDYQEAITYSFVDQELQQLLDP 526 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQK 585 L + NPIS DM+ MRT+L GL++A N R FE + + Q+ Sbjct: 527 EGSPLVLNNPISTDMAVMRTTLWTGLVQALQYNSYRQQERIRFFEYGLTFNGQLADLKQE 586 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL-----DSLRF 640 AG+ G+S E G + R D FD K D +E +SL + F Sbjct: 587 RTIAGLISGASYPEQWGLV--------GRPADFFDLKGD----VEAILSLVGEQRNCFEF 634 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + + HPG+S I + V G+ G HP + LS+ YL S+ + + Sbjct: 635 MAASHPALHPGQSAQILREGQAV-GWLGALHPWLESKLDLSS-----RAYLFSLQLEAVE 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLG 759 R LS ++RD+AF+V+ +IP + + +K + ++ + +FDV+ GK + Sbjct: 689 RGSLPVFQSLSKFPAIRRDIAFLVNANIPVQVVFDCLKGCESDILKEFQLFDVYTGKGID 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A+++++Q T DD + I ++R++ +V + A++R Sbjct: 749 PDKKSLALKLILQHPSYTLTDDRVNIFIERVMALLVTELGAIIR 792 >gi|262374318|ref|ZP_06067594.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter junii SH205] gi|262310876|gb|EEY91964.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter junii SH205] Length = 793 Score = 369 bits (946), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 263/827 (31%), Positives = 423/827 (51%), Gaps = 56/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ ++ + E + D LT +GLEV+++ PFT I +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSETLSDQLTMLGLEVDEL--APVAKPFTGVVIGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G +Q+VCGAPNV VG+ A G+ +P + + K+RGIES G Sbjct: 59 ADRLRVTTVNIGSGDPLQIVCGAPNVSVGMKAPVATIGAVLP-GDFKIKKGKLRGIESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGMNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN-NV---APN 232 ++ + ++N++ P +SI I + + +G + V+N NV P Sbjct: 178 EIAV-----INQLNVNEP-KIQSIAATIADEKIVNITTEGTPRYLGRIVKNVNVKAKTPE 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM Q L G+R+ S LVD+TNYV L+ G P H FD ++I + VR+A EK+L L++ Sbjct: 232 WMEQALARSGIRTHSILVDVTNYVLLELGQPMHAFDLAKIEGSIQVRQAQPQEKLLLLND 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L D +VIA ++ +IAGI+GG + D+T D+ +E A + P+ IA + G+ Sbjct: 292 QEVELQEDIMVIADQQKVLAIAGIMGGLDSSVTDDTQDIFLESAFFAPLAIAGRARRFGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS R+ERGVD + + + LI + GG I +A P++ I S+ Sbjct: 352 HTDSSQRYERGVDFELPMIAMHRASELIQAFAGGEFGPITVAEQAELLPKREAIPLKQSQ 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G +V E L RLG V ++ V PS R D+ DL+EE+ RI+G Sbjct: 412 VDQLLGYEVAGEFIADALARLGCMVETKAQGEWSVVPPSHRYDMAIYQDLIEEVARIHGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRY----VKRVLASRAMMEVVNWSFISKEQSVLFG 525 D I+ LP K ++ L++ + R+ +++ +A+ E +++SF + Sbjct: 472 DNIQIS-LP------KIDVKLEKYQDRFEVAQLRQTVATLGYQEAISFSFADAKLEKQLN 524 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE--- 582 + L + NPIS+D++ MR++LL L+ N++R FE+ ++ + Sbjct: 525 PNVQPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQQRVRFFELGLRFDYQNAKDIH 584 Query: 583 --GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLR 639 Q A I GS E W K + +D FD K + ++ V++D +R Sbjct: 585 DLKQIPTLALIAVGSRTPES----WHIKPQA----MDFFDFKGEVEEILAAGRVNVDYIR 636 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 E W HPG+S I + + GY G HP++ + L + LD + Q Sbjct: 637 TER---EWLHPGQSAEILVDGKSI-GYLGRLHPSLENVLDLG---ITWVAELDQQAVLQ- 688 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 + LS V+RD+A ++ I + +IK L+D +FDV+ G+ + Sbjct: 689 --SYVSNFTELSRFPSVRRDIALLISDKIEVRDIQQLIKQTGGELLDSTWLFDVYTGQGV 746 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +GK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 747 EQGKRSLAFALLWQHPTRTLEDAEIKSGMDNIIQVLEDTYQATLRAS 793 >gi|269217105|ref|ZP_06160959.1| phenylalanyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] gi|269129242|gb|EEZ60327.1| phenylalanyl-tRNA synthetase, beta subunit [Slackia exigua ATCC 700122] Length = 818 Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 252/846 (29%), Positives = 442/846 (52%), Gaps = 71/846 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +L WL ++++ ++ CD L G VE V+ +A +V+S + +PD D Sbjct: 1 MKISLKWLSEYVEVPSDVQAFCDRLDLTGTGVEGVERLGDAFDHIVTGRVISKDAHPDSD 60 Query: 60 CA-ILRIDTGKH--------QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + ++D G+ + +Q+VCGA N G V A G+ +P + + ++R Sbjct: 61 HMWVCQVDVGEANLGADGAPEPLQIVCGAQNFNAGDHIVVALVGAELP-GGIKIKKSRLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ S GM CS +EL D IM LP DAPVG ++Y ++D ++D+ +TPNR D + Sbjct: 120 GVASCGMNCSARELGFGSDHTGIMILPEDAPVGVPFAEYQGVTDTVLDLEITPNRPDSLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPL-----SSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 V G A ++ G + +++ P S E I ++ ++ D++L + ++GV Sbjct: 180 VVGFAREV-----GAMYDVDFRMPERALQESDERIDGQVSVEVTDAALSPRYTARLIRGV 234 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD---------ASRISDVL 276 + +P+W+ +RL A+G RSI+ +VD+TNYV + G P H FD A+RI Sbjct: 235 KVGPSPDWLAERLAAIGQRSINNVVDVTNYVLFELGQPLHTFDFDALDLEDGAARI---- 290 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VR A +GEK+ LD +E L+PD VIA+ R ++AG++GG + ++T ++L+E A Sbjct: 291 IVRAAHAGEKLTTLDGEERVLTPDMTVIATPKRAVALAGVMGGLDSEVTEDTVNILLEAA 350 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR- 395 + P + +R+ +NLG+++DS R+ER VD G+ + +LI + GGT +C R Sbjct: 351 TFSPAHTSRTSRNLGLMSDSSIRYERRVDDAGIDERSDYAAALIAEVAGGT---VCAGRV 407 Query: 396 ----NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK-FEVSVPSW 449 + + + F +++ G +P++ R L RLG +V G+ + V+VP++ Sbjct: 408 DVWAHADAQALVLPFRVERFQKMMGAAIPVDFITRSLTRLGCTVSAGDAEGVLRVTVPTF 467 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 R D+E + DL EE+LR+YG+D+I+S LP + Q+ R V R + + + E Sbjct: 468 RPDLEREIDLYEEVLRLYGMDRIEST-LPAGRGRVGVRTRRQECE-RIVHRAMTASGLNE 525 Query: 510 VVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + +SF + L G E++NP++AD + MR S++PGLL++ N +A Sbjct: 526 TMTYSFAGGDDLELLRMREEGMGEAAELINPMNADHAFMRRSIVPGLLRSVAYNQSHGVA 585 Query: 566 DFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 D ++EV V+ E +K AG+ G+ G + W + E F D FD K Sbjct: 586 DIQLYEVGTVFFAHEGSKKPREKRRVAGVLAGAMGP----KAW---NAEPAAF-DFFDGK 637 Query: 623 ADALSVIEPFVSLDSLRFES-GAPSWYH--PGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 L + ++L ++F++ GA H PGR+ ++ + + V+G+ GE HP ++ +G Sbjct: 638 G-VLENVARELALPKVKFKALGADEATHLQPGRAAVMMSGGD-VIGWVGEIHPLAVEAYG 695 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 P+ FE+ D++ ++ + V + V+RD+AF+VD+ + L+ +K+ Sbjct: 696 AKAPVVAFELDADAL---ERDMRPARDYVDVPQFPGVQRDIAFVVDEGVSDEKLMQCMKS 752 Query: 740 V-DRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L++ +FDV++ + +G GKKS+A + + T D++ +++ V + Sbjct: 753 AGGALLEGARLFDVYRDDEHVGPGKKSMAYALTYRAADRTLTSDEVDKAHEKLRAKVCRA 812 Query: 798 TNAVLR 803 T A +R Sbjct: 813 TGAEVR 818 >gi|187478559|ref|YP_786583.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella avium 197N] gi|115423145|emb|CAJ49676.1| phenylalanyl-tRNA synthetase beta chain [Bordetella avium 197N] Length = 804 Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 262/826 (31%), Positives = 437/826 (52%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F+ SWL+ ++ + E++ LT GLEVE + + A PF+ + +++ +PD Sbjct: 1 MQFSESWLRTLVNPAIGTEELAHQLTMAGLEVE--ETQTAAPPFSGVVVARIVEAAAHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + +Q+VCGAPN GLL A G+ +P N+ + V K+RG+ S+G Sbjct: 59 ADKLRVCKVDDGSGELLQIVCGAPNAAAGLLVPLARVGAQLP-GNIKIGVAKMRGVASSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D ++ELP G + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHGGLLELPDRFTPGTDIRQALDLDDTLFVLKLTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L ++ P ++++P++I L + LC FA ++GV A P Sbjct: 178 EVAA-----LTGAPLNAP-QAQAVPVQIDARLPVRIEAPELCGRFAGRVIRGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM+ RL+ G RS+SALVDI+NYV L+ G PSHVFD +I LTVR A GEK+ L Sbjct: 232 DWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIDGDLTVRWARKGEKLELLS 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +L VI + ++S+AGI+GG+ +T ++ +E A W P IA + Sbjct: 292 GTHIELDEKVGVITAGDVVESLAGIMGGEATSVTLDTQNIYLEAAFWWPGAIAGRARRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SE 410 +++ +RFERGVD + ++ I +LIL +CGG A I + + R V M + Sbjct: 352 FSSEASHRFERGVDFGNIPEHIELITALILDICGGQAGPID-DQIVNLPARPPVRMRLAR 410 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 R+ G+ V ++ +I RLG E D F V+ PS+R D+E + DL+EE+ RIYG + Sbjct: 411 CHRVLGVPVSHDEVAQIFTRLGLVFTTEGDDFIVTPPSYRFDIEIEEDLIEEVARIYGFE 470 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I SEP P+ + +++ ++R +A+R EVVN+SF+ + + G Q Sbjct: 471 RIPSEP-PVARASMHAQAEVRRG-PHALRRAVAARDYQEVVNYSFVEADWERDYAGNQHP 528 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM-AA 589 + +LNPI++ +S MR+SL+ GL+ N +R + +FE+ V+ D + A Sbjct: 529 VRLLNPIASHLSVMRSSLIAGLVAIIRHNANRKQSRVRLFELGRVFMRDAQLADGPLEVA 588 Query: 590 GIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 G+R+ ++ +G W +EE+ R VD +D K D S+ + LRF + Sbjct: 589 GVRQ---PLKLAGAAWGPANEEQWGEPTRAVDFYDVKMDVESLFG--IRASELRFVADRH 643 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I+ + + V G+ GE HP L+ FE+ D+ +S+ + + Sbjct: 644 PALHPGRAARIELAGQTV-GWVGELHPQWARQADLAQAPVVFEI--DAGVLSEGQLPVVR 700 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKSLG 759 + LS V+RDLA VD+ + +++ + ++ + ++ DV +FDV++ K Sbjct: 701 E---LSRQPLVQRDLALWVDESVSLQAMLDTVASLIKADPQLAVVQDVRLFDVWRDKPQQ 757 Query: 760 --EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A + +Q T + + + RI + ++ A R Sbjct: 758 GVAAEKSLAFRFWLQDSAVTLDEARVSDCISRIRDALISAHGARQR 803 >gi|329927102|ref|ZP_08281458.1| phenylalanine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] gi|328938679|gb|EGG35058.1| phenylalanine--tRNA ligase, beta subunit [Paenibacillus sp. HGF5] Length = 816 Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 258/844 (30%), Positives = 441/844 (52%), Gaps = 70/844 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M+ + WL D++ + V+ E + +TS G+E++ ++ R + ++ + V S E++PD Sbjct: 1 MRVSTDWLSDYISLEGVTSEDLASRITSAGIEIDVIEKRNQGINNVVVGYVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNVCVVDAGQEEDLQIVCGAKNVDAGQKVPVALVGAKLP-GGLDIKKAKLRGVLSQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP D +G + D L L+D I+++ LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKELQEGILVLPADTEIGKPIVDVLGLNDEILELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCP---------LSSESIPLEIKFDLDDSSLCKGFAMCCV 222 G A + V+A LG+ E+++ P +++ I + I D C +A + Sbjct: 180 LGTAYE-VSAILGR--ELSLPNPEKEMLEVHDAAADHISVTIGAD----EQCSHYAARYI 232 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 GV +P WM+ RL A G+R I+ +VDITNYV L+ G P H FDA ++ D + VR A Sbjct: 233 TGVTIAPSPLWMQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADQLKDGAVHVRMA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GE I+ LD E +L +VI + G+ ++AG++GG + D T ++ +E A +D Sbjct: 293 EAGETIVTLDGAERNLESHMLVITAGGKPVALAGVMGGLDSEVTDGTVNIFLESAKFDGG 352 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYK 400 + ++ + LG+ +++ RFE+ VD +IP L +L+ GG+ I A + + Sbjct: 353 TVRKTSRQLGLRSEASSRFEKEVDPAAVIPALNRAAALMAKYAGGSVHQGIVEAGSAQTE 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKAD 458 P I ++ R G ++ + + I RL F G+ + ++ VPS R D+ D Sbjct: 413 PSVITLSLEKLNRYLGTELSLLEVKTIFSRLHFPS-GDAGQGLVDIQVPSRRGDITLDVD 471 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 L+EE+ R+YG D I P T +E +L+ Q+ R ++R+L EV+ +SF Sbjct: 472 LIEEVARLYGYDNI-----PTTAIEGPTTPGSLTEAQAIRRSLRRLLTHSGFQEVLGYSF 526 Query: 516 ISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 I +Q+ +F G + +++ P+S D S +RTSLLP LL N +R D A+FE+ Sbjct: 527 IHPQQAEVFTSLSEGGKAVKLAMPMSEDRSVLRTSLLPQLLDIAVYNHNRKQPDLALFEI 586 Query: 573 SHVY----ENDTPEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +++ E T + Q+ G+ RKGS + W+ + + VD FD K Sbjct: 587 GNLFHTQEETLTKQPQERPVLGLLLSGRKGS-------KQWNVQPAK----VDFFDLKGA 635 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGL 680 +V++ + D + +E+ P+ +HPGRS + + + +LG G+ HP L Sbjct: 636 LETVLDYLGIRADDIAYEANGPAGFHPGRSASVYVGQGENKHLLGVLGQIHPKTQQELDL 695 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-N 739 + E+ L+ + R + + + +RDLA +V++ + AG+L+ +I+ N Sbjct: 696 EDTYAA-EILLEPLYDLTNARVAYRDLPRFPGM---ERDLAIVVNEEVEAGSLIQVIREN 751 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 L+ + VFDVF G LGEGKKSVAI + + + T D+++ + ++ V + + Sbjct: 752 AGELLQQIQVFDVFTGSKLGEGKKSVAISLTYRHQERTLTDEEVAGVTEKAVAALQQTFG 811 Query: 800 AVLR 803 A LR Sbjct: 812 AELR 815 >gi|294649377|ref|ZP_06726808.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter haemolyticus ATCC 19194] gi|292824747|gb|EFF83519.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter haemolyticus ATCC 19194] Length = 793 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 257/823 (31%), Positives = 425/823 (51%), Gaps = 48/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVRVG+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRVGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGINIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN-NV---APN 232 ++ K+ E +I + +P I + + +G + V+N NV P Sbjct: 178 EIAVINQLKMNEPDI------QPVPATITDEKTVTIATEGTPRYLGRIVKNVNVKAPTPE 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM Q L G+R+ S LVDITNYV L+ G P H FD ++I + VR+A EK++ L++ Sbjct: 232 WMEQALAHSGIRTHSILVDITNYVLLELGQPMHAFDLAKIDGSIQVRQAQPKEKLILLND 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE +L D +VIA D + +IAGI+GG + D T D+ +E A + P+ IA + G+ Sbjct: 292 QEVELQDDIMVIADDQKALAIAGIMGGLDSSVTDETQDIFLESAFFAPLAIAGRARRFGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TDS R+ERGVD + I + LI + GG I +A P + I ++ Sbjct: 352 HTDSSQRYERGVDFELPIIAMHRACELIQTFAGGEFGPITVAEQAALLPTREAIQLKQAQ 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G +V + L RLG V + ++ V PS R D+ DLVEE+ RI+G Sbjct: 412 VDQLLGYEVAGDFIADALMRLGCVVETTAEGEWNVIPPSHRYDMAIYQDLVEEVARIHGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRY----VKRVLASRAMMEVVNWSFISKEQSVLFG 525 D I+ LP K ++ L++ + R+ +++ +A+ E +++SF + Sbjct: 472 DNIQIS-LP------KIDVKLEKYQDRFEIAQLRQTVATLGYQEAISFSFADAKLEKQLN 524 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + L + NPIS+D++ MR++LL L+ N++R FE+ ++ +G K Sbjct: 525 PAVQPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQHRVRFFELGLRFDY---QGAK 581 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FESG 643 + + + + G L + + + +D FD K + IE ++ ++ F Sbjct: 582 DIHDLKQIPTLALIAVGSLVPESWHVKPQAMDFFDFKGE----IEEILAAGRVKAEFART 637 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +W HPG+S I + + + GY G HP++ + L + LD + Q + Sbjct: 638 QRAWLHPGQSAEILVNGQSI-GYLGRLHPSLENDLDLGTT---WVAELDQQAVLQ---SY 690 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 LS V+RD+A ++ +I + +I+ L+D +FDV+ G+ + +GK Sbjct: 691 VSNFTELSRFPSVRRDIALLISDNIEVKDIQRMIEQTGGELLDSTWLFDVYTGQGVEQGK 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 751 RSLAFALLWQHPARTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|94264270|ref|ZP_01288064.1| phenylalanyl-tRNA synthetase, beta subunit [delta proteobacterium MLMS-1] gi|94266796|ref|ZP_01290461.1| phenylalanyl-tRNA synthetase, beta subunit [delta proteobacterium MLMS-1] gi|93452539|gb|EAT03125.1| phenylalanyl-tRNA synthetase, beta subunit [delta proteobacterium MLMS-1] gi|93455315|gb|EAT05522.1| phenylalanyl-tRNA synthetase, beta subunit [delta proteobacterium MLMS-1] Length = 812 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 259/839 (30%), Positives = 438/839 (52%), Gaps = 61/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK T +WLK+++ T++ I LT +GLEV+ V+ L + KVL VER+P+ D Sbjct: 1 MKCTENWLKEYVTTELDTAGIASRLTMLGLEVDTVEPLYRDLEGVVVGKVLEVERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +VVCGA NVR G+ A PG +P N + KIRG +S GM+ Sbjct: 61 RLSLCTVDDGSGTSRRVVCGAANVRAGMFSPLARPGVVLP-GNFKIKASKIRGEKSEGML 119 Query: 119 CSEKELMLSD---DSASIMEL-PIDAP---VGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 C+++EL L D +S IM+L P + P G LS + L D +I+V LTPNR DC GV Sbjct: 120 CADRELGLDDGRGESGGIMDLDPAEFPDLAPGVELSTVMGLRDTMIEVDLTPNRPDCAGV 179 Query: 172 RGIALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A + VA G+ + E+ ++E +P +++ + ++ C+ +A ++GVR Sbjct: 180 IGLARE-VAGVTGQPLRPPITELPADWTAAAEPLPFKVEVE---AAACQRYAARLLRGVR 235 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W+RQRL AVGLR I+ +VD+TNYV L+ G P H FD +++ ++ VR+A +GE Sbjct: 236 VGPSPWWLRQRLLAVGLRPINNVVDVTNYVMLEYGQPLHAFDHDKLAGGLIRVRQAAAGE 295 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + L+ + +VIA + ++AGI+GG + ++ ++L+E A + ++ + Sbjct: 296 QLTTLDGVQRQLTGEMLVIADAAKPVAVAGIMGGADSEVGGDSVNILLESACFAAKSVRK 355 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + L + TDS YRFERGVD + L V LI+++ GG A + R +P + Sbjct: 356 TAAALKLATDSSYRFERGVDPEAAPRALARAVELIVAIAGGEAVPGGVDYREGVVEPPLL 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE---YDKFEVSVPSWRQDVEEKADLVE 461 + L G ++ + ++L G + GE + V PS+R D+E + DL+E Sbjct: 416 TLRLRRINELLGTELALSTVQKLLA--GIEIYGEPAGEEALRVQPPSFRVDLEREIDLIE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+ R+ G +QI P T + +K +L++R E +N+SFI+ + Sbjct: 474 EVARLVGYEQI-----PTTMPQVAMAAPAVGDEAAGLKALLSARGCYEAINYSFINPAAA 528 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 G +R L +LNP+S + S MR+SLLPGLL+ N++ D +FE VY Sbjct: 529 DWLNWPAADGRRRWLPLLNPLSEEQSVMRSSLLPGLLENARHNINHQCGDLRLFEWGRVY 588 Query: 577 ENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + P+ + A + G E LW ++E D++D K ++E ++ Sbjct: 589 QRPDPDAAPREMERLAAVLSGRRYPEAP-LLWEGEAE-----ADIYDIKGLLEEMLE-YL 641 Query: 634 SLDSLRFESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 L P+ PG G+ T LG G+F P +L FG+ + ++ + Sbjct: 642 QRPGLELTVAVETPAGTVPGH-GLTLTYEGKKLGEAGKFQPAVLKAFGIKQQVFYLDLDM 700 Query: 692 DS---IPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDD 746 +S +P+++ + H +P VK DLA +V + PAG L +I+ +L++ Sbjct: 701 ESLMALPVAE-------RAFHSLPRYPAVKWDLAMLVAEETPAGEMLAAVIEAGGKLLER 753 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +FDV++G+++ GKKSVA + + + T ++ + ++ +I++ + + + LR + Sbjct: 754 AEIFDVYRGRNIEPGKKSVAFAIHYRDAERTLNEEKVAVVHQKIIDLLESRFHGQLREA 812 >gi|326391470|ref|ZP_08213005.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter ethanolicus JW 200] gi|325992496|gb|EGD50953.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter ethanolicus JW 200] Length = 792 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 256/819 (31%), Positives = 432/819 (52%), Gaps = 45/819 (5%) Query: 3 FTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLDCA 61 +LSWLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MSLSWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKL 60 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMCS Sbjct: 61 LVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMCSA 119 Query: 122 KELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ + GIA Sbjct: 120 EELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A K K + S E P ++ + D LC + VK V+ +P WM+ Sbjct: 179 REVAATFKKKFKMPVVEVNESEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQE 294 RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD +E Sbjct: 237 MRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKRIIVRRAKEGEKLVTLDGKE 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA + + +AG++GG++ D T ++L+E A + NI + K LG+ + Sbjct: 297 RTLDSSMLVIADEKKAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ RFE+G+D + + + L+ CGGT + + ++ +N + R Sbjct: 357 EASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINR 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++P + ILE L F V+ + D E++VP +R+DV +AD+ EEI R++G + I+ Sbjct: 417 FLGTELPTSQMIEILESLEFKVLQKGDDLEITVPHFRRDVTMEADIAEEIARLFGYNNIQ 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGGGQ 528 + Q ++ +Q +K VL + + E+V SF+ K L + Sbjct: 477 DSLMKNAQT-TLGAMTKEQELEEKIKEVLLACGLNEIVTISFMGSKDLDKINVPLDSPLR 535 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYM 587 + ++I+NP+ D S MRT+LLP +L N R + DF +FE+S V+ + P K + Sbjct: 536 KAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKVFMPKELP--LKEL 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESGAP 645 I+ + G+ G + VD + K +AL + ++ +R E P Sbjct: 594 PQEIKTIAIGMYG-------------KDVDFYSLKGVIEALFEVMGIKGVEYVRAED--P 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S YHPGRS I E LG FGE HP++L+ + + + G E+ LD + + K Sbjct: 639 S-YHPGRSAKILLGDE-TLGIFGEIHPDVLENYDIPVRVYGGEINLDKV---IQYANVEK 693 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + L V+RD+A +VD+ I + +I + +LID V +FDV++G ++ EGKKS Sbjct: 694 RYMPLPKYPAVERDIAVLVDRDIFVKDVEKVILETGGKLIDKVELFDVYKGPNIPEGKKS 753 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VA + + + T D+++ ++ + IVE + KK A LR Sbjct: 754 VAFSIWYRSYERTLTDEEVNVIHNNIVEALDKKLGAKLR 792 >gi|255320841|ref|ZP_05362015.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262380266|ref|ZP_06073421.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SH164] gi|255302010|gb|EET81253.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SK82] gi|262298460|gb|EEY86374.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter radioresistens SH164] Length = 793 Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 264/825 (32%), Positives = 416/825 (50%), Gaps = 52/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + E + + LT +GLEV+ D A PFT V +VLSVE++PD Sbjct: 1 MKISENWLRSWVNPAIDSETLSNQLTMLGLEVD--DMSPAAKPFTGVVVGEVLSVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSDEPLQIVCGAPNVRAGMKAAVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAP+G + +YL L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKLDGLLELPDDAPIGMNVREYLNLDDHVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PN 232 ++ G + ++ ++ P ++ +I E K +D + C + +K V A P Sbjct: 178 EI-----GVINQLAVTAPEVADVAATIADEKKVIVDTAG-CPRYLGRVIKHVNTKAATPL 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM Q L G+R S LVDITNYV ++ G P H FDA + + VR+A EK++ L+ Sbjct: 232 WMEQALARSGIRQHSILVDITNYVLMELGQPLHAFDAGNVQGAVHVRQANPQEKLVLLNE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 QE LS D +VIA D + +IAGI+GG + D TT++ +E A + P+ IA + G+ Sbjct: 292 QEVTLSEDIMVIADDEKALAIAGIMGGLSSAVSDETTEIFLESAFFAPLAIAGRARRFGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSE 410 TD+ R+ERGVD + I + LI L GG I + P + I ++ Sbjct: 352 HTDASQRYERGVDFELPILAMNRASQLIQELAGGDFGPITVVEQSELLPTRDAIELKQTQ 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G + E L RLG V I + V PS R D+ DL+EE+ RI G Sbjct: 412 VDQLLGYQLDGEFITDALTRLGCRVEIRAEGHWIVVPPSHRYDLAIYQDLIEEVARIDGY 471 Query: 470 DQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 D I+ LP+ V+ + L L Q R + +A+ E +++SF + Sbjct: 472 DNIQIS-LPVIDVKLAKYQDQLELGQLR-----QTIATLGYQEAISFSFADAKLEKQLNP 525 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEGQ 584 L + NPIS+D++ MR++LL L+ N++R +FE+ Y+N T Sbjct: 526 QVHPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQNRVRLFELGLRFDYQNATD--- 582 Query: 585 KYMAAGIRK-GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-- 641 +G+++ + + G + + + +D FD K D +E ++ ++ E Sbjct: 583 ---ISGLQQIPTLALIAVGSRVPESWHAKAQVMDFFDLKGD----VEAILAAARIKVEYV 635 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 SW HPG+S I + V GY G HP++ D L + LD + Q Sbjct: 636 PSERSWLHPGQSAEILVDGKTV-GYLGRLHPSLEDELDLG---ITWVAELDQKAVLQ--- 688 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + LS V+RD+A ++ I + +I+ L+ +FDV+ G+ + E Sbjct: 689 SYVSNFTELSRFPSVRRDIALLISDKINVSEIQQLIEQTGSELLHSAWLFDVYTGQGVEE 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 GK+S+A +L Q T D +I+ MD+I+E + A LR+S Sbjct: 749 GKRSLAFALLWQHPTRTLEDAEIKSGMDKIIEVLENTYQATLRAS 793 >gi|73748211|ref|YP_307450.1| phenylalanyl-tRNA synthetase subunit beta [Dehalococcoides sp. CBDB1] gi|91208239|sp|Q3ZZD2|SYFB_DEHSC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|73659927|emb|CAI82534.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalococcoides sp. CBDB1] Length = 809 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 261/834 (31%), Positives = 437/834 (52%), Gaps = 55/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK L WLK++L TD+ ++ + +T G EV +++ + P V +++ V R+P+ D Sbjct: 1 MKIPLKWLKEYLPTDIQPAELAERMTMAGTEVAVLNSHKDKWPNVYVGQIMEVNRHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIES 114 +L ++D G+ QE VV GAPN +VG V+A G+ + + + +++ +RG+ES Sbjct: 61 RLVLVKVDWGQGQET-VVTGAPNCKVGDKVVFARTGAVLIDGHNGKEIVLKPAVLRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSE+EL LSD+ I+ LP DA VG S+YL + I+D+ LTPNR D + V G+ Sbjct: 120 CGMVCSERELGLSDEHEGILVLPADALVGMLASEYL--GEVILDLELTPNRGDLMCVTGV 177 Query: 175 ALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A +L A + +L I + + I +I+ ++++S LC + ++G++ +P+W Sbjct: 178 AREL-GALIDRLPAISDPDFKATGPDIKEKIEIEINNSKLCTRYTASLIEGIKLGESPDW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 +++RL A G+R I+ +VD TNYV L+ G P H FD +I S + VR A GE + LD Sbjct: 237 LKERLIACGMRPINNVVDATNYVMLEFGQPLHAFDYDQIKSRHIIVRPAAEGEVLTTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E LSPD ++I RI ++AG++GG++ + T+ +L+E A +D +I ++ + L + Sbjct: 297 VERKLSPDMLLITEPDRIIALAGVMGGENTEVTEKTSRILLESATFDKQSIRKTARGLKL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-IVFMNSEV 411 +++ RFE+G+ + LK LIL + GG A+ I K R IV ++V Sbjct: 357 QSEASARFEKGLSYELAPIALKRATQLILEIAGGQAASGLIDVLPNKKERNGIVLSLAKV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEY-------------DKFEVSVPSWRQDVEEKAD 458 ++ G + D+ +I +RLGF + EY D + WR D+E D Sbjct: 417 NQILGYEKEPPDACKIAKRLGFIWLPEYVPGMEEFGYGATEDMVRIYPGYWRMDIETDID 476 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++EE+ RI G I LPL + K R+++++L+ E++++SF S+ Sbjct: 477 MIEEVARIAGYHTIPC--LPLDKAIPKIETPPLPGMKRFLRQILSGYGFQELISYSFTSR 534 Query: 519 EQ-SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S + G + E L I NP+S++ MRTSL P L + N ++E+ VY Sbjct: 535 EMLSRVSSGAEPEFLAISNPMSSEQEVMRTSLRPSLYASLAANRRFEKDGLRLYELGRVY 594 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN E + + A I GSS + + D FD K ++E V Sbjct: 595 LPKENKKQEEPEMLCAVIAGGSS---------QSRWQRNTAGFDFFDVKG----IVESMV 641 Query: 634 SLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 S L + S H ++GI+ ++ +G G+ P D F ++ P+ FE+ Sbjct: 642 SRLGLSADFVVSDEHGLSHGYQAGIL--VGDMPVGILGQVSPQTADKFDITEPVYMFEIN 699 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF 750 L + R K + + V+RDLA ++D+HI +++I+ D L+ + +F Sbjct: 700 LSKLITRAMVRRKFNPINRFPA---VERDLALVIDRHITNRQVIDILSEYD-LVKNAELF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D++QGK + E KKS+A +L Q T +D+++ +M +I+ + +T AVLRS Sbjct: 756 DMYQGKQIAENKKSLAYHLLFQSDTHTLKDEEVDGVMSQILGRLNTETGAVLRS 809 >gi|307266648|ref|ZP_07548177.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter wiegelii Rt8.B1] gi|306918311|gb|EFN48556.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter wiegelii Rt8.B1] Length = 792 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 257/819 (31%), Positives = 432/819 (52%), Gaps = 45/819 (5%) Query: 3 FTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLDCA 61 +LSWLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MSLSWLKEFVDIDEDAKIIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKL 60 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMCS Sbjct: 61 LVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMCSA 119 Query: 122 KELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ + GIA Sbjct: 120 EELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A K K + S E P ++ + D LC + VK V+ +P WM+ Sbjct: 179 REVAATFKKKFKMPVVEVNESEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQE 294 RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD +E Sbjct: 237 MRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKRIIVRRAKEGEKLVTLDGKE 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA + + +AG++GG++ D T ++L+E A + NI + K LG+ + Sbjct: 297 RTLDSSMLVIADEKKAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ RFE+G+D + + + L+ CGGT + + ++ +N + R Sbjct: 357 EASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINR 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++P + ILE L F V+ + D E++VP +R+DV +AD+ EEI R++G + I+ Sbjct: 417 FLGTELPTYQMIEILESLEFKVLQKGDDLEITVPHFRRDVTMEADIAEEIARLFGYNNIQ 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGGGQ 528 + Q ++ +Q +K VL + + E+V SF+ K L + Sbjct: 477 DSLMKNAQT-TLGAMTKEQELEEKIKEVLLACGLNEIVTISFMGSKDLDKINVPLDSPLR 535 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYM 587 + ++I+NP+ D S MRT+LLP +L N R + DF +FE+S V+ + P K + Sbjct: 536 KAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKVFMPKELP--LKEL 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESGAP 645 I+ + G+ G + VD + K +AL + ++ +R E P Sbjct: 594 PQEIKTIAIGMYG-------------KDVDFYSLKGVIEALFEVMGIKGVEYVRAED--P 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S YHPGRS I E LG FGE HP++L+ + + + G E+ LD + + K Sbjct: 639 S-YHPGRSAKILLGDE-TLGIFGEIHPDVLENYDIPVRVYGGEINLDKV---IQYANVEK 693 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 K + L V+RD+A +VD+ I + +I + +LID V +FDV++G ++ EGKKS Sbjct: 694 KYMPLPKYPAVERDIAVLVDRDIFVKDVEKVILETGGKLIDKVELFDVYKGPNIPEGKKS 753 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VA + + + T D+++ ++ + IVE + KK A LR Sbjct: 754 VAFSIWYRSYERTLTDEEVNVIHNNIVEALDKKLGAKLR 792 >gi|167470816|ref|ZP_02335520.1| phenylalanyl-tRNA synthetase, beta subunit [Yersinia pestis FV-1] Length = 712 Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 239/708 (33%), Positives = 372/708 (52%), Gaps = 25/708 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L++ +CGG A + + P++ I ++ RL Sbjct: 358 HRYERGVDPALQHKAIERATRLLIDICGGEAGPVVDVTTASELPKQATITLRREKLDRLI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 418 GHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIPDV 477 Query: 476 PLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P+ V K R SL R VK L R E + +SF+ + L Q L + Sbjct: 478 PVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALILP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M AG Sbjct: 535 NPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVMLAG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + + + + +D +D K D +++E L ++F + A S HP Sbjct: 595 VI--------AGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHSALHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 G+S I + E + G+ G HP + L+ FEV + + Q Sbjct: 647 GQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADQQ 693 >gi|300691320|ref|YP_003752315.1| phenylalanine tRNA synthetase, beta-subunit [Ralstonia solanacearum PSI07] gi|299078380|emb|CBJ51030.1| phenylalanine tRNA synthetase, beta-subunit [Ralstonia solanacearum PSI07] Length = 809 Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 263/831 (31%), Positives = 425/831 (51%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPPITTAELSHRLTMAGLEVEDVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV G L+G PPG + + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSAGIKVPCALVGAELPPGD--DGKSFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ L DAPVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELQLSEDQGGLLILADDAPVGEDIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ ++ +P+++ + LC F+ ++GV Sbjct: 179 GVARE-VSALTGAPVTLPSMAPVAVTLADKLPVKV----EAPDLCGRFSGRIIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGQPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTITVDEKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVF 406 TD+ +RFERGVD + ++ I +LIL +CGG A I I T P ++ Sbjct: 354 RYNFSTDAGHRFERGVDYATTVEHIERISALILEICGGQAGPIDDHIVNLPTRAPVRMRV 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + R+ GI + + RLG + E D F V PS+R D+E + DL+EE+ RI Sbjct: 414 --ARASRVLGIALTNAIVSDVFTRLGLTFRVEGDDFIVDAPSYRFDLEIEEDLIEEVARI 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG +QI ++P P+ E+ + + RT + V+ +A+R EVVN++F+ E F Sbjct: 472 YGFEQIPAKP-PVA--ENAMRPTNEARRTMHDVRHAVAARDYHEVVNFAFVETEWEADFA 528 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--PEG 583 G + + +LNPI++ S MR++L+ GLL N++R + +FEV V++ D +G Sbjct: 529 GNTQPIPLLNPIASQYSVMRSTLIGGLLDKVRYNLNRKASRVRLFEVGRVFQRDADVADG 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +A + +G G ++ + R VD FD K D S++ P +RFE Sbjct: 589 GLSVAGYAQPMRAGGIAYGPATEEQWGVQTRAVDFFDVKGDVESLLWPL----QVRFERA 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ + +G+ GE HP L + L +E+ LD I+ Sbjct: 645 EHPALHPGRAARVVLDGR-AIGWIGELHPRWLQKYDLPTAPVVWELDLDV--ITAVGLPA 701 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVFDVFQGK- 756 ++V + + V RD+A +V Q + LV+ + R + V +FD F+ K Sbjct: 702 YREVPRVPA---VTRDIALVVRQDVAVQDLVDTFEKAAVGTPWQRYLQGVVLFDEFRPKA 758 Query: 757 ---SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 759 ATAAIGVQEKSLAFRITLQDTDSTLQDDIVDAATQQLIRAAGDAFGARLRA 809 >gi|257063206|ref|YP_003142878.1| phenylalanyl-tRNA synthetase, beta subunit [Slackia heliotrinireducens DSM 20476] gi|256790859|gb|ACV21529.1| phenylalanyl-tRNA synthetase, beta subunit [Slackia heliotrinireducens DSM 20476] Length = 811 Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 253/836 (30%), Positives = 435/836 (52%), Gaps = 59/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK ++ WL D++ ++ CD L G VE+VD + +V+S E +PD D Sbjct: 1 MKISMKWLADYVQVPDEIKAFCDQLDLTGTGVEEVDRLGDTFDHIVTAQVVSKEPHPDSD 60 Query: 60 CA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + IQVVCGA N G + A G+ +P + + K+RG+ S GM Sbjct: 61 HMFVCQVDVGQAEPIQVVCGAQNFNQGDHIITALVGAELP-GGIKIKKSKLRGVTSNGMN 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L +D + IM LP DAP+G +DYL + D ++D+ +TPNR D + V G A + Sbjct: 120 CSARELGLGNDHSGIMILPEDAPIGMPAADYLGIGDTVLDLEITPNRPDSLSVVGFARE- 178 Query: 179 VAAGLGKLKEINISCP---------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 +G + +I+I+ P L+S+++ ++I D LC + ++ V+ Sbjct: 179 ----VGAMYDIDITLPSRELTETDELTSDAVAVQIP----DPELCPRYTARLIRNVKVGP 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-----SDVLTVRRACSG 284 +P+W+ +RL A+G RSI+ +VD+TNYV + G P H FD + + VR A G Sbjct: 231 SPDWLVERLAAIGQRSINNIVDVTNYVLFELGQPLHTFDFDTLDVENGKATIIVRAAEEG 290 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EKI LD E +L+ D VI++ R ++AG++GG + + TT+VL+E A ++ + + Sbjct: 291 EKITTLDGAERELTSDMTVISTPKRAVALAGVMGGIDSEVTEGTTNVLLEAATFNQAHTS 350 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPR 402 R+ +NLG+I++S R+ER VD + + +LI + GGT + R Sbjct: 351 RTSRNLGLISESSIRYERRVDDHDIDWRSDYAAALIAEVSGGTVCKGIVDEWPAGDTPAR 410 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLV 460 ++ +++ G DVP+E L RLG +V D V+VP++R D+E + DL Sbjct: 411 ELPLRVKRCQQMLGDDVPVEFMKSRLTRLGCTVADTEDPDVLSVTVPTYRPDLEREIDLY 470 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--- 517 EE+LR+YG+D+I S LP + L+ QQ + R L++ M E + +SF Sbjct: 471 EEVLRLYGMDRIPST-LPAGRGR-VGVLTPQQLIDAKLHRTLSASGMNETMTYSFAHVDD 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + G +E++NP++A+ ++MR +++PGLL++ N R + + ++E+ V+ Sbjct: 529 LENLRMKEDGLGDPVELINPMNAEQAHMRRTIIPGLLRSIAYNQSRGVNNIQLYEIGTVF 588 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE--- 630 E ++ AG+ GS G++G W+ D FD K S+ Sbjct: 589 AAHEGSKKPKERRKLAGVLAGSMGVKG----WNTDPAP----FDFFDGKGVLESIARELA 640 Query: 631 -PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P V+ +L E AP PGR+ + + + + G+ GE HP D F PI FE+ Sbjct: 641 LPKVTFRALSAED-APH-LQPGRAARMLSGGDEI-GWIGEIHPLAADAFDAKAPIVAFEL 697 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVT 748 ++++ ++ + V + V RD AF+VD+ + L+ +K+ +L+++V Sbjct: 698 DMNAL---ERNARPARDYVDVPQFPEVARDAAFVVDETVTNEKLMQCMKSAGGKLLEEVR 754 Query: 749 VFDVFQG-KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++ K LG GKKS+A + + T +++ +++++ + T A +R Sbjct: 755 LFDVYRSDKHLGAGKKSMAYSLTYRAADRTLTSEEVDKAHNKLIDKTCRATGAEVR 810 >gi|114332286|ref|YP_748508.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosomonas eutropha C91] gi|114309300|gb|ABI60543.1| phenylalanyl-tRNA synthetase beta subunit [Nitrosomonas eutropha C91] Length = 792 Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 253/823 (30%), Positives = 421/823 (51%), Gaps = 52/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF----TIVKVLSVERNP 56 MKF +WL+ +D S E++ LT GLEVE V ++PF I +V+SV+++ Sbjct: 1 MKFPGNWLRKLVDYQCSDEELAHKLTMAGLEVESV---VPVAPFFDKVVIAEVMSVQKHA 57 Query: 57 DLD-CAILRIDTGKHQE--IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRG 111 + D + ++D G + + +Q+VCGA NV G+ V A G+ +PE +N+R KIRG Sbjct: 58 NADRLRVCKVDVGNYSDEPLQIVCGAQNVTEGMKTVCALIGARLPE----LNIRQGKIRG 113 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +ES GM+CS +EL L ++ ++ELP DAP G +Y L D I + LTPNR+DC+G+ Sbjct: 114 VESFGMLCSARELGLVSEADGLIELPDDAPAGISFREYDGLDDSIFTLKLTPNRADCLGM 173 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVA 230 GIA ++ A GKL I P++ E I ++ +++ C + VKG+ + Sbjct: 174 FGIAREVAAITAGKLNLPEIK-PVNPE-IADVLRIRVEEPQSCPLYCGRIVKGIITSTQT 231 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS----DVLTVRRACSGEK 286 P WM Q L GLR I+ +VDI NYV L+ G P H FD ++I + VR A + E+ Sbjct: 232 PLWMNQYLVRAGLRLINPVVDIINYVMLETGQPMHAFDLAKIEKGAEQEIRVRYAVANER 291 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ + DL D +VIA + ++AGI+GG + + TTD+ +E A + P I+ Sbjct: 292 LRLLNGECLDLQEDLLVIADSSKPLALAGIMGGSESEVEGGTTDIFIESAFFSPAAISGK 351 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 LG +DS +RFERGVD L+ +L+L +CGG + N + + Sbjct: 352 SFKLGFSSDSSHRFERGVDFSMTRNALERATALVLDICGGKIGPVVEVSNDLPRRDAVEV 411 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + ++ G+D IE RL F D F V P+ R D+ + D +EE+ R+ Sbjct: 412 RQKRIAKILGVDFGIELISEYFRRLQFGHSVSGDTFYVVPPASRFDLVIEEDFIEELARM 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 +G D I ++ LP + + + ++++L +R EV+N++F+ + G Sbjct: 472 HGYDLIPAQ-LPKASAHMLTEPEIGIAPVKRLRQILVARDYQEVINYTFVDTQWEADLCG 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 +++ NPI++ M MR+SL GL+ N++R + IFE+ + D E ++ Sbjct: 531 NNLPVKLKNPIASHMDVMRSSLFGGLINNLQFNLNRKQSRVRIFEIGSCFSKDNDEEKEV 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + + SG + ++ R VD +D K D S+ P ++ FES Sbjct: 591 -------ENLAVLCSGNVHPEQWGVTDRDVDFYDVKMDVESLFWP----RNIDFESAVHP 639 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL-----DSIPISQKKR 701 HPG+S I + G+ GE HP + LS FE+ + D +P+ Q Sbjct: 640 ALHPGKSARILIDKSPI-GWIGELHPRWQRKYHLSQSAILFELQIEALASDLLPMMQV-- 696 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGE 760 LS PV+RD+A +V+ + L+ + + D+ + ++++FD++ G++L + Sbjct: 697 --------LSKFPPVRRDIAVVVENEVSMAKLLEAMNSEKDKSVSEISLFDLYSGENLEQ 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++L+Q + D +I ++ ++ + +K A LR Sbjct: 749 GKKSLAFRILLQGTEKNLTDQEIDQAVNGLINVLGRKFGATLR 791 >gi|312143803|ref|YP_003995249.1| phenylalanyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] gi|311904454|gb|ADQ14895.1| phenylalanyl-tRNA synthetase, beta subunit [Halanaerobium sp. 'sapolanicus'] Length = 806 Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 261/828 (31%), Positives = 434/828 (52%), Gaps = 45/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ + +WLK +++ + S E + + LT GLEVE ++ + L I ++ ++ +P+ D Sbjct: 1 MQISYNWLKKYININFSAEDLSEKLTMAGLEVEALEYLGQGLEDIIIAEITKIKEHPNAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C I R + G +EI VV GAPNV G +A GS +P M + K+RG S Sbjct: 61 KLQICYI-RTEAG-DEEIPVVTGAPNVEEGQKVPFAGVGSSLP-GGMEIEEVKLRGEISK 117 Query: 116 GMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CS EL L ++ +A IM L DAP+G Y++L D I + LTPN + C+G+ G+ Sbjct: 118 GMICSADELGLQEERAAGIMVLDSDAPLGLSFIKYMKLDDYIYKLDLTPNYARCLGMLGV 177 Query: 175 ALDLVAAGLGKLKE-----INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 A + + + + KE I + + I +++ ++ D LC ++ +K V Sbjct: 178 ARE-IKSLYAQDKELIKPTIQFNEDKNETHISEQVEIEIKDPDLCPRYSARLIKDVEIKE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P+W+++RLKA G+R I+ +VDITN+V ++ P H FD ++I D + VRRA GE I Sbjct: 237 SPDWIQRRLKAAGIRPINNVVDITNFVLMEYNQPLHSFDYNKIKDGKIIVRRAEKGETIT 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD ++ L + +VIA ++AG++GG + TTDVL+E A ++P+++ ++ K Sbjct: 297 TLDEEQRLLDDEMLVIADPDEAVAVAGVMGGFESEVTAQTTDVLIESAYFNPVSVRKTAK 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ +D+ +RFERGVD++ + L+ GGT I Y+P I Sbjct: 357 KLGMHSDASHRFERGVDIEKAVEANNRACQLLEKCAGGTVVPGVIDEYPGKYEPAVIELD 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V L G+++ + IL+RL FS+ + DK V+VPS+R DV ADLVEEI R+Y Sbjct: 417 CDRVNELLGVELEESKIIEILKRLQFSLEKKEDKVLVTVPSFRTDVSRGADLVEEIARVY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G ++I+S P+++ KR + +Q+ + +K +L S + EV+ +S +K+ Sbjct: 477 GYNEIES-SRPVSKQRGKR--TAKQNFEKDLKELLNSGGLDEVITYSLQAKKGYQDLNLT 533 Query: 528 QRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 Q E +EI NP+SA +RT+L+PGL+ N R A+ A+FE V+ E Sbjct: 534 QVERFNNFVEIKNPLSAAFGILRTTLIPGLIDVLASNARRQGAEMAVFETGTVFRK---E 590 Query: 583 GQKYMAAGIRKGSSGIEGS-GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRF 640 G + K G+ G+ LW + + + K + E + D L F Sbjct: 591 GDNKRPLELNKLGGGLFGAEDNLWQQDAP------NFYQLKGVLEMLFEHILLEDYHLEF 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQK 699 P + HPGR I LG+ GE HP + + L FE+ LD + +S+ Sbjct: 645 AEQRP-YLHPGRKANIIVEGH-KLGFIGEIHPELAEKNDLPQGTTIFEMDLDKLFELSKD 702 Query: 700 KRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKS 757 K K++ +PV RDLA ++ + I G + IK+ ++ ++ +FD++QG Sbjct: 703 KSYHYKQITK----YPVLDRDLAVVIKEDIAIGEIYQAIKSEAGAMLKELNLFDIYQGDQ 758 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + G KS A ++ Q T RD+++ ++IV+++ ++ +A +R + Sbjct: 759 IKSGYKSAAFELKFQAEDRTLRDEEVNERFNKIVDHLSEQYSAEIRGN 806 >gi|261408905|ref|YP_003245146.1| phenylalanyl-tRNA synthetase subunit beta [Paenibacillus sp. Y412MC10] gi|261285368|gb|ACX67339.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus sp. Y412MC10] Length = 816 Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 257/844 (30%), Positives = 441/844 (52%), Gaps = 70/844 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M+ + WL D++ + V+ E + +TS G+E++ ++ R + ++ + V S E++PD Sbjct: 1 MRVSTDWLSDYISLEGVTSEDLASRITSAGIEIDVIEKRNQGINNVVVGYVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNVCVVDAGQEEDLQIVCGAKNVDAGQKVPVALVGAKLP-GGLDIKKAKLRGVLSQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP D +G + D L L+D I+++ LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKELQEGILVLPADTEIGKPIVDVLGLNDEILELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCP---------LSSESIPLEIKFDLDDSSLCKGFAMCCV 222 G A + V+A LG+ E+++ P +++ I + I D C +A + Sbjct: 180 LGTAYE-VSAILGR--ELSLPNPEKEMLEVHDAAADHISVTIGAD----EQCSHYAARYI 232 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 GV +P WM+ RL A G+R I+ +VDITNYV L+ G P H FDA ++ D + VR A Sbjct: 233 TGVTIAPSPLWMQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADQLKDGAVHVRLA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GE ++ LD E L P +VI + G+ ++AG++GG + D T ++ +E A +D Sbjct: 293 EAGETMVTLDGAERRLEPHMLVITAGGKPVALAGVMGGLDSEVTDGTVNIFLESAKFDGG 352 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYK 400 + ++ + LG+ +++ RFE+ VD +IP L +L+ GG+ I A + + Sbjct: 353 TVRKTSRQLGLRSEASSRFEKEVDPAAVIPALNRAAALMAKYAGGSVHQGIVEAGSAQTE 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKAD 458 P I ++ R G ++ + + I RL F G+ + ++ VPS R D+ D Sbjct: 413 PSVITLSLEKLNRYLGTELSLLEVKTIFSRLHFPS-GDAGQGLVDIQVPSRRGDIMLDVD 471 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 L+EE+ R++G D I P T +E +L+ Q+ R ++R+L EV+ +SF Sbjct: 472 LIEEVARLHGYDNI-----PTTAIEGPTTPGSLTEAQAIRRSLRRLLTHSGFQEVLGYSF 526 Query: 516 ISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 I +Q+ +F G + +++ P+S D S +RTSLLP LL N +R D A+FE+ Sbjct: 527 IHPQQAEVFTSLSEGGKAVKLAMPMSEDRSVLRTSLLPQLLDIAVYNHNRKQPDLALFEI 586 Query: 573 SHVY----ENDTPEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +++ E T + Q+ G+ RKGS + W+ + + VD FD K Sbjct: 587 GNLFHTQEETLTKQPQERPVLGLLLSGRKGS-------KQWNVQPAK----VDFFDLKGA 635 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGL 680 +V++ + D + +E+ P+ +HPGRS + + + +LG G+ HP L Sbjct: 636 LETVLDYLGIRADDIAYEANGPAGFHPGRSASVYVGQGENKHLLGVLGQIHPKTQQELDL 695 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-N 739 + E+ L+ + R + + + +RDLA +V++ + AG+L+ +I+ N Sbjct: 696 EDTYAA-EILLEPLYDLTNARVAYRDLPRFPGM---ERDLAIVVNEEVEAGSLMQVIREN 751 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 L+ + VFDVF G LGEGKKSVAI + + + T D+++ + ++ V + + Sbjct: 752 AGELLQQIQVFDVFTGSKLGEGKKSVAISLTYRHQERTLTDEEVAGVTEKAVAALQQTFG 811 Query: 800 AVLR 803 A LR Sbjct: 812 AELR 815 >gi|291287867|ref|YP_003504683.1| phenylalanyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] gi|290885027|gb|ADD68727.1| phenylalanyl-tRNA synthetase, beta subunit [Denitrovibrio acetiphilus DSM 12809] Length = 789 Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 244/827 (29%), Positives = 411/827 (49%), Gaps = 62/827 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MK +L+WL ++ D+ I + LT GLEV+ V++ L + KV S ++PD D Sbjct: 1 MKVSLNWLNKFVEVADLDPNDIAEKLTMCGLEVDAVEHLAPLDNVVVAKVKSCVKHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L + QVVCGAPNV G V+A G+ +P N + KIRG ES+GM+C Sbjct: 61 KLSLCEVFDGTETYQVVCGAPNVAEGQTIVFAKIGAVLP-GNFKIKKAKIRGTESSGMIC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +E E+ LS++ IM L G +++ L D ++++ +TPNR+DC+ + G A ++ Sbjct: 120 AEDEIGLSENHDGIMVLDDSLEPGMPVNELFGLPDTVLEIGITPNRADCLSIIGYAHEIA 179 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A KLK+ + E ++ + C + +K V +P WM+ RL+ Sbjct: 180 ALYNRKLKKNEYKLNETDEPAGNYGGVEIKNKKACPTYLGRVIKDVTIKPSPLWMQNRLR 239 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 AVG+R IS +VDITNYV + G P H FD I + +R A +GEK++ LD +E + Sbjct: 240 AVGVRPISNVVDITNYVLFEYGQPLHTFDLKEIDGRIIIRNAENGEKLITLDEKERVFNE 299 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 + ++I + + +IAG++GG+H+G +T DV +E A ++P + + LG+ TD+ YR Sbjct: 300 NMLLITDEKKSLAIAGVMGGEHSGISKDTKDVFLECAYFEPKQTRMTARKLGMQTDASYR 359 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF-MNSE-VKRLSGI 417 +ERG+D + ++ LI LCGG + P I F +N++ + G Sbjct: 360 YERGIDPVNTKEMCEYAAYLIQELCGGKVCKGVLGE--VNDPEPITFTVNADWINSYLGT 417 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DV ++ ++IL+ L + + ++ PS+R D+ + D+ EEI R+YG + I P Sbjct: 418 DVSLDQMVQILDGLNMNPVVNSRDITITSPSYRVDIITRQDIAEEIARMYGYNNI---PT 474 Query: 478 PLTQVEDKRNLSLQQ--SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 L ++ D ++ +Q + R++ + L + E +N+SF+ + LF ++ ++++N Sbjct: 475 TLPKI-DADSMPMQPLLATRRFLAQKLKTLGFNEAINYSFMKADFLKLFDSEEKFVKLIN 533 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIR 592 PIS DM+ MRT + PGLL N++ FE + + E+ PE + +AA Sbjct: 534 PISEDMNTMRTQVFPGLLATIRYNLNNGFKQARFFEFASSFIKTEDKLPEQRMLLAA--- 590 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL------------RF 640 S+G D +D A EPF + + F Sbjct: 591 -ASAG-------------------DFWDVSWAAPKGTEPFFMMKGVLENLLAQYKIKAEF 630 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV----YLDSIPI 696 + + HPG+S + + + + G+ GE HP + L + FE+ ++D+ Sbjct: 631 TKSSRHFLHPGKSAEVIVNGKSI-GFIGELHPLTAEAAELRERVTFFEIDMQDFVDNAEF 689 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGK 756 K + S V +D++ IVD P L IKN +L +DV+++DV+ GK Sbjct: 690 VFKFES-------FSKFPSVYKDISVIVDTDTPTEKLTECIKNTSKLAEDVSLYDVYTGK 742 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGK S +VL T D++ ++ ++++N+VK A LR Sbjct: 743 GIEEGKASRTFRVLFTAGDRTLTDEETNGILQKMIDNLVKDYGAQLR 789 >gi|152980129|ref|YP_001353182.1| phenylalanyl-tRNA synthetase beta chain [Janthinobacterium sp. Marseille] gi|151280206|gb|ABR88616.1| phenylalanyl-tRNA synthetase beta chain [Janthinobacterium sp. Marseille] Length = 809 Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 277/839 (33%), Positives = 430/839 (51%), Gaps = 65/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F+ SWL+ +D +++ +++ LT GLEVE+V+ PF+ + +VL V R+P+ Sbjct: 1 MQFSESWLRTMVDPNMTSDELAHLLTMSGLEVEEVE--PVAPPFSNVVVAEVLEVARHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + +++ G + +VCGAPNVR G+ V A G+ +P + V +RG+ Sbjct: 59 ADRLNVCQVNVGTGTMLNIVCGAPNVRAGMKVVCAMAGAILPPGEDGKPFEIKVGALRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LSD+ +M+LP DAPVG DY +L+D + LTPN++DC+ V Sbjct: 119 ESQGMLCSARELKLSDEQGGLMDLPADAPVGQNFRDYYQLNDLKFTIKLTPNKADCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 G+A ++ A LK ++ + L +K D LC F+ ++G+ P Sbjct: 179 GVAREVSALTGTPLKAPTFQPVAATITDVLPVKISAPD--LCGRFSGRIIRGLNARAQTP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM+QRL+ G R ISALVDI+NYV L+ G P+HVFD S+I+ L VR +GE + L+ Sbjct: 237 DWMKQRLERSGQRPISALVDISNYVMLELGRPTHVFDLSKINGGLDVRWGKAGESLKLLN 296 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + VIA + I+S+AGI+GG + +T D+ +E A W P I G+ Sbjct: 297 GNTVAVDEWVGVIADEKEIESLAGIMGGDASAVSLDTQDIYLEAAFWYPNAIQGRGRRFN 356 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC----IARNITYKPRKIVFM 407 TD+ +RFERGVD + ++ I +LI+ +CG D+ I ++ P++ Sbjct: 357 FSTDAAHRFERGVDFATTVEHMERITALIVEICG--QKDLTKVGPIDDHVVNLPKREAVS 414 Query: 408 NSEVKRLSGIDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + I VP+ D + I RLG S + F V+ PS+R D+E + DL+EEI R Sbjct: 415 VRTARAVKVIGVPLTDEMIADIFTRLGLSFTQKDGVFSVTPPSYRFDIEIEEDLIEEIAR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 +YG + I + LP R + + +R+ + ++R LA EVVN+SF+ +E F Sbjct: 475 VYGFENIPA--LPPVAASAMR-IPPENTRSLFTIRRQLADADYQEVVNFSFVEQEWEADF 531 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----END 579 G +++LNPI++ MS MR+S++ L+ N++R ++ +FE+ +Y E D Sbjct: 532 AGNTNPIKLLNPIASQMSVMRSSMIGSLIANVRYNLNRKVSRIRLFEIGAIYLRNNVEQD 591 Query: 580 TPEG-----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 P Q A I GS E W S R VD FD KAD ++ P + Sbjct: 592 GPLSVAGFDQPKRVAAIAYGSVAEEQ----WGLAS----RNVDYFDVKADLEALFAP-QT 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV---YL 691 L ++ E A HPGRS I + E V+G+ GE HP + L FEV L Sbjct: 643 LTFVKVEHPA---LHPGRSASILLNGE-VIGFIGELHPRWQQKYDLPLAPVLFEVNATAL 698 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII------KNVDRLID 745 S+ + K +S V RDLA +V Q + L++ V ++ Sbjct: 699 QSVGVPSYK--------EISKFPAVTRDLALVVKQTVAMQDLMDAFISEKQYNPVCNILQ 750 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +FD ++GK L +KS+A + +Q + T +DD + M V K A LR+ Sbjct: 751 VVVLFDEYRGKGLEPDEKSLAFRFTLQDTQLTLQDDLVDAAMAAFVAAATSKHGAKLRA 809 >gi|239814881|ref|YP_002943791.1| phenylalanyl-tRNA synthetase subunit beta [Variovorax paradoxus S110] gi|239801458|gb|ACS18525.1| phenylalanyl-tRNA synthetase, beta subunit [Variovorax paradoxus S110] Length = 813 Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 252/838 (30%), Positives = 418/838 (49%), Gaps = 61/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL++ + + ++ +TLT G EVE + R PF+ + V ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLGSAELAETLTMGGFEVE--ERRPVAPPFSRIVVGEIKEAVQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + +VCGAPN RVG L+G PPG ++ + K+R Sbjct: 59 ADRLRVCQVDAGQGALLNIVCGAPNARVGIKVPCALVGAELPPGE--DGKPFLIKLGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL DAP+G + D L+L D ++ + LTPN + + Sbjct: 117 GVESQGMLCSARELKLSEDHGGLLELDADAPIGADVRDMLKLDDALLTLKLTPNLAHGLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A +L A LK I+ +S + L +K + + LC F+ V+GV VA Sbjct: 177 VYGVARELAALTGAPLKTPAIAPVAASFADVLPVKVEAPE--LCGRFSGRIVRGVNTQVA 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL G RS++ LVDI+NYV + G PSH+FD +I LTVR +GE++ Sbjct: 235 TPAWMVERLARCGQRSVTPLVDISNYVMFEYGQPSHIFDLDKIHGGLTVRWGKAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA D ++S+AGI+GG D+T ++ VE A W P + + Sbjct: 295 LNGNTISVDDKVGVIADDQAVESLAGIMGGDATSVSDDTRNIYVEAAFWWPEAVQGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFM 407 TD+ +R+ERGVD + +++ I LI+ +CGG A + I P + Sbjct: 355 FNFSTDAGHRYERGVDPSRTVEIIERITQLIIEICGGQAG--AMDDKILNVPEAMPVTLR 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ G+ + L RLGF++ V+ P R D+ + DL+EE+ R+ Sbjct: 413 VARAARVIGMPLTQAQCADALRRLGFALREGEGTLTVTPPPHRFDLLIEEDLIEEVARLI 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G + + + PL + + + + R+R+ V+R LA+ E +N+SF+ G Sbjct: 473 GFNNLPTN-APLAPITAR--VRPESRRSRFAVRRSLAALGYQETINFSFVEAHWEQDLAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + +LNPI++ MS MR+SLL LL+ N+DR +FEV V+ D + Sbjct: 530 NANPVRLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVRVFEVGRVFMRD--DSVAT 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFES 642 + +R + +G W D E R + VD +DAK D +++ P V+ FE Sbjct: 588 TDSTVRGVDQPMRVAGLAWGDAEEARWDGKPQRVDFYDAKGDVEALLAPRVA----SFEL 643 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQK 699 HPGRS + + + G+ GE HP + + FE+ LD++ P+ Sbjct: 644 AEHPALHPGRSARVLVDGKAI-GFIGELHPRWRQKWDFALAPVLFELDLDAVAARPVPLA 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV---DRLIDDVTVFDVFQGK 756 + + V+RD+A +V + + L+ I++ L+ D T+FD+++ + Sbjct: 703 RPVPKHQA--------VERDIAVVVAEAVTHNALMQAIQSAAAGQGLLRDATLFDIYRPQ 754 Query: 757 -----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +G+KS+A+++ Q T D+ + + IVE + + A LR Sbjct: 755 PARDGAAPASGGLAQGEKSMAVRLSFQDDSATLTDEQVEPAVRAIVEQLSARLGARLR 812 >gi|262374866|ref|ZP_06068100.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter lwoffii SH145] gi|262309879|gb|EEY91008.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter lwoffii SH145] Length = 793 Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 257/821 (31%), Positives = 413/821 (50%), Gaps = 44/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + +WL+ ++ + +K+ D LT +GLEV+++ +A + + +VL+VE++PD D Sbjct: 1 MKISENWLRTWVNPAIDSDKLSDQLTMLGLEVDELAPAAKAFTGVVVGEVLTVEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G +Q+VCGAPNVR G+ A G+ +P + + K+RGIES GM+ Sbjct: 61 RLRVTTVNIGSGGPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGIESQGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA ++ Sbjct: 120 CGASEIDLEDKIDGLLELPADAPVGMNIREYLDLDDNVIDISITPNRGDCFSIRGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNN-VAPNWM 234 G + ++ ++ P E +I E K + C + +K V V P WM Sbjct: 180 -----GVINQLPVTAPEIKEVAATISDEKKVVVSTEG-CPRYLGRVIKNVNTKAVTPVWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 + L G+R S LVDITNYV ++ G P H FD ++ + VR A EK++ L+ QE Sbjct: 234 ERALARSGIRQHSILVDITNYVLMELGQPLHAFDGGKVQGAVHVRPATEAEKLVLLNEQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ +VIA D + +IAGI+GG + D TT++ +E A + P++IA ++ G+ T Sbjct: 294 VELNEKVMVIADDEKALAIAGIMGGLSSAVSDTTTEIFLESAFFAPLHIAGRARSFGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 D+ R+ERGVD + + + LI L GG I +A N P + I ++V Sbjct: 354 DASQRYERGVDFELPLIAMHRASQLIAELAGGEFGPITVAENAALLPTRDAIELNQAQVD 413 Query: 413 RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 +L G V L RLG V + ++ + PS R D+ DL+EE+ RI+G D Sbjct: 414 QLLGYSVDSAFITDALTRLGCEVTVKAEGEWSIVPPSHRYDMVIYQDLIEEVARIHGYDN 473 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I+ + L ++ K Q +++ + E +++SF + L Sbjct: 474 IQ---ISLPVIDVKLAKYQDQFELGQLRQTAVTLGYQEAISFSFADLKLEKQLNFSVNPL 530 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----QKY 586 + NPIS+D++ MR++LL L+ NV+R + FE+ ++ Q Sbjct: 531 ALANPISSDLAVMRSTLLSSLIPCVQYNVNRQQSRVRFFELGLRFDYQEASSIHDLKQIP 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAP 645 A I GS E W K +D FD K D ++ V ++ +R E Sbjct: 591 TFALIATGSRHAES----WHVKPAA----MDFFDFKGDIEEILAAGRVKVEYVRSER--- 639 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 SW HPG+S I + + + GY G HP++ D L+ + LD + Q T Sbjct: 640 SWLHPGQSAEILVNGQSI-GYLGRLHPSLEDELDLATT---WVAELDQAAVLQ---TYVS 692 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 LS V+RD+A +++ I + +I K L+D +FDV+ G+ + EGK+S Sbjct: 693 NFTELSRFPSVRRDIALLINDKINVSEIQGLIEKTGGELLDSTWLFDVYTGQGVEEGKRS 752 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +A +L Q T D +I+ MD I++ + A LR+S Sbjct: 753 LAFALLWQHPSRTLEDAEIKSGMDNILQVLENTYQATLRAS 793 >gi|332284514|ref|YP_004416425.1| phenylalanyl-tRNA synthetase subunit beta [Pusillimonas sp. T7-7] gi|330428467|gb|AEC19801.1| phenylalanyl-tRNA synthetase subunit beta [Pusillimonas sp. T7-7] Length = 803 Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 261/818 (31%), Positives = 423/818 (51%), Gaps = 47/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER---NPD 57 M+F SWL+ ++ D+ + + LT GLEVE+ A PF+ V V ++ +P+ Sbjct: 1 MQFPESWLRAFVNPDLDTDALSHRLTMAGLEVEETTT--AAPPFSGVVVAYIKEIAAHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D I ++D G +Q+VCGAPN G+ A G+ +P M + + K+RG+ES+G Sbjct: 59 ADKLRICQVDDGSGDLLQIVCGAPNAAAGIKVPLARVGAELP-GGMKIGIAKMRGVESSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++EL DAPVG L L+L D + + +TPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELDADAPVGASLRTALDLDDAVFTLKMTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L + ++ P S E +P+ ++ ++ LC FA ++GV A P Sbjct: 178 EVSA-----LTGVALNLP-SFEPVPVTLQDRLPVTIEAPDLCGRFAGRVIRGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W++ RL+ G RSISALVDI+NYV L+ G P+HVFD RI LTVR A GE++ L+ Sbjct: 232 AWIKNRLERAGQRSISALVDISNYVMLELGRPTHVFDLKRIQGGLTVRWAKPGEQLELLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L PD +IA+D ++S+AGI+GG+ +TTD+ +E A W P I + Sbjct: 292 GQTVTLEPDVGIIAADNGVESLAGIMGGEATAVTLDTTDIYLEGAFWWPEAIMGRPRRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SE 410 +++ +RFERGVD + L+ + L++ +CGG A + + + RK V M + Sbjct: 352 FSSEASHRFERGVDFDSITEHLEFMTRLLIDICGGQAGPLD-DQIVNLPARKPVSMRLAR 410 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 R+ G+ V + I LG S + + D F V+ PS+R D+ + DL+EE+ RIYG Sbjct: 411 CHRILGVPVSRNEVEGIFTSLGLSFEVQDDDVFVVTPPSYRFDLFIEEDLIEEVARIYGF 470 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFISKEQSVLFGGGQ 528 ++I P P+ + K S + R + R A + EV+N++F+ + + G Sbjct: 471 ERIPDVP-PVARA--KMLASPEVLRGPHALRARTAGQDYQEVINFAFVEEAWERHYAGNA 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +++LNPI++ ++ MR+SL+ GLL N +R + +FE+ V+ D +A Sbjct: 528 DPIKLLNPIASQLAVMRSSLIGGLLANIVHNANRKQSRVRVFELGRVFARDAKVVDGDLA 587 Query: 589 -AGIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 AGI + +G W EE+ R VD +D K D ++ SL + Sbjct: 588 VAGIHQPQ---RLAGAAWGPSVEEQWGTPVRQVDFYDVKKDVECLLG--AQAGSLECLAD 642 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGRS ++ + + G+ GE HP L++ FE+ +D+I ++ Sbjct: 643 THPALHPGRSARLQLDGKHI-GWLGELHPRWAQQCDLAHAPVVFELDVDAISVN-----A 696 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKS 757 +S V RDLA + L+N + +V ++ D+ +FDV++ KS Sbjct: 697 FPAPAEISRQPVVIRDLAVWAGLDVSYKDLLNTLTHVIESNATLGIVKDIKLFDVWRDKS 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 +KS+A + +Q + T D + M ++E +V Sbjct: 757 AETNEKSMAFRFWLQDREATLDDARVEQCMTLLLEGLV 794 >gi|88810670|ref|ZP_01125927.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrococcus mobilis Nb-231] gi|88792300|gb|EAR23410.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrococcus mobilis Nb-231] Length = 793 Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 253/818 (30%), Positives = 408/818 (49%), Gaps = 41/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+ + WL++ + +V ++ LT GLEV V A S + +++ +P+ D Sbjct: 1 MRISEQWLREWVAFEVPAAELSRRLTMAGLEVSSVQAAAPAFSGVIVGEIVQCVPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + G + + +VCGAPN R GL A G+ +P+ I R +RG +S GM+ Sbjct: 61 RLKLCEVRAGDSELVSIVCGAPNARTGLKAPLAQVGAQLPDGLRIRQTR-LRGEQSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL L+D++A ++ELP DAP G L YL L + +I+V LTPNR DC+ + G+A ++ Sbjct: 120 CSAKELGLADEAAGLLELPQDAPSGMDLRQYLSLDEHLIEVDLTPNRGDCLSMAGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 G L ++ P S ES+ I LD + C + V+GV P W Sbjct: 180 -----GVLLRKPVTEP-SFESVAAVIDDERLVHLDAPADCPRYLGRIVRGVDARAPIPLW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +R+RL+ G+R +SA VD+TNYV L+ G P H FD S + + VRRA +GE++ L+ Sbjct: 234 LRERLRRAGIRPLSAAVDVTNYVMLELGQPLHAFDLSTLEGDIRVRRAAAGEELALLNGA 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +L +VIA R ++AGI+GG + T D+ +E A + P IA + G+ Sbjct: 294 SVELDEQTLVIADTHRPVALAGIMGGAPTAVTEQTRDLFLEAAFFAPQTIAGRARRYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEV 411 TDS +RFERGVD ++ L++ + GG + A + P ++ + V Sbjct: 354 TDSAHRFERGVDPNLPRIAMERATRLLIEIAGGRPGPVREASDAACLPPVMELTLRPARV 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +L G ++P + ILERLG SV D + + VP +R D+ + DL+EEI R++G D Sbjct: 414 AQLLGSEIPHAEMHEILERLGMSVTESSADAWSIRVPGYRFDIAREVDLIEEIARVWGYD 473 Query: 471 QI--KSEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++ + P L + +R L + R ++++L R E + +SF+++E Sbjct: 474 ELPARRAPAQLAMIARPERVLPI-----RRLRQLLIDRGYQEAITYSFVARELEQALDPA 528 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 + + NPISAD++ MRTSL PGL++A N R +FE + Q+ Sbjct: 529 AAPIALANPISADLAVMRTSLWPGLIRALLHNQKRQHERVRLFETGLCFSGGLEALRQEP 588 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 AGI GS+ W ++ R +D FD K D +++ + RF S Sbjct: 589 ALAGIACGSA--------WPEQWGMPRRSLDFFDIKGDVEALLALTGESKAFRFAPEPHS 640 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I V G+ G HP + LS P FE+ L I + Sbjct: 641 ALHPGQSARIYRGDRGV-GWVGALHPRVQRTLELSAPGFVFELALAEI-----EAAVLPA 694 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LS ++RDLA +VD+ + + + I+ + ++ VFD+++G+ + G+KS+ Sbjct: 695 FQDLSRYPSIRRDLAIVVDEAVAVQQVQDCIRAAAGENLREIVVFDLYRGQGVSVGRKSL 754 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T D ++ + +V + + A LR Sbjct: 755 AIGLILQDSSRTLTDREVEEFISCVVGQLRHQLKAELR 792 >gi|323144189|ref|ZP_08078824.1| phenylalanine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] gi|322416030|gb|EFY06729.1| phenylalanine--tRNA ligase, beta subunit [Succinatimonas hippei YIT 12066] Length = 791 Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 254/818 (31%), Positives = 419/818 (51%), Gaps = 41/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+F W+ + +S +++ D +T GLEV+ V + KV+ +PD D Sbjct: 1 MRFNKKWIDTWVPNTLSADELSDMITMAGLEVDTVFPVCGEFDKVVVGKVVECFNHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN R GL + G+ +P + + K+RG++S GM+ Sbjct: 61 HLHVTKVDVGTGELLQIVCGAPNCREGLKVAVSLVGAKLP--GITIKAAKLRGVDSCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL ++++S I+ELP DAP+G + +Y++L D I+V LT NR DC+G+RG+A ++ Sbjct: 119 CSYAELGMAEESDGIIELPDDAPIGMDVHEYMQLDDSAIEVDLTTNRPDCLGIRGLAREV 178 Query: 179 VAAGLGKLKEINI-SCPLSSESI-PLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 + E + P S E I P+E+K C + + GV +P WM Sbjct: 179 GVLLNTDVNEPEFKTVPPSCEDIFPVEVKA----PEACPRYLCRIIHGVNQKAKSPLWMT 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ G+RS+S +VD+TNYV L+ P H FD + +++ + VR A GEK+ L E Sbjct: 235 ERLRRCGIRSVSPIVDVTNYVMLELCQPLHSFDLNNLNEKIIVRMAQEGEKLTLLSGDEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L PD +VIA ++AGI GG ++G +D TTDVL+E A + P+ I + G+ TD Sbjct: 295 ALKPDTLVIADAKGPVALAGIFGGLNSGINDATTDVLLEAAFFSPVAIKGRAREYGLNTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKR 413 + +R+ERGVD ++ L+L + GG A I + P I + + Sbjct: 355 ASHRYERGVDPFVQRLAMERATDLLLQIAGGVAGPINGVEHENLLPEYAPIPLRRDRLAK 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + G + ++ IL RL + D F + PS+R D+ + DL+EE+ RI+G + I+ Sbjct: 415 VLGKRIDDDEVFNILSRLDLNPTKTADGFTATSPSFRFDIAIEEDLIEEVARIHGYNNIE 474 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + LP++ + + R ++ V+ +E + +SF + +F L + Sbjct: 475 NR-LPVSDLYMTHEAE-HVVKDRRIRDVMTDNGYLEAITYSFTDPKVLSVFDDAH-PLML 531 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAA 589 +PIS++MS MRT+LL L NV+R +FE + ++ + D G Q+ M A Sbjct: 532 TSPISSEMSAMRTTLLASLAVVAKYNVNRQQKRVRLFENGLRYIIDKDAENGVRQEAMLA 591 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 GI G + E LW+ KS R VD FD K +V+ + ++ + H Sbjct: 592 GICVGDNDDE----LWNIKS----RQVDFFDIKGTVEAVLSLTADPKAFKWVRTQSKFLH 643 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV-- 707 PG+ + + V G G HP G + FE+ +K T+K+ Sbjct: 644 PGQGADLYLNGRKV-GVVGMLHPLAQKALGFKQSVGVFEI--------EKSAIITRKIPL 694 Query: 708 -VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V+RD AF++++ + AG++V++IK + +I +V VFDVF+ SLG+ K+S+A Sbjct: 695 YAPVSKFPSVRRDFAFVLNKGVEAGSVVDMIKGLSPIIKEVRVFDVFEDASLGD-KRSLA 753 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V+ Q T D + L ++IV V + + LR+ Sbjct: 754 LGVIFQDPDRTLEDSAVEDLANKIVSGVKQNFDGDLRA 791 >gi|260556049|ref|ZP_05828268.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii ATCC 19606] gi|260410104|gb|EEX03403.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii ATCC 19606] Length = 793 Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 255/828 (30%), Positives = 420/828 (50%), Gaps = 58/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ + PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDELAS--VAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V A P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAKPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPVIAMNRASQLIQELAGGEFGPITVAEKSDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTVQANGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ +A+ E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVATLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 SPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLK 587 Query: 586 ------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSL 638 +A G R+ S W K + +D FD K + ++ V ++ + Sbjct: 588 QIPTLALVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYV 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 636 RSER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ 688 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ Sbjct: 689 ---SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQG 745 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 746 VEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|299066591|emb|CBJ37781.1| phenylalanine tRNA synthetase, beta-subunit [Ralstonia solanacearum CMR15] Length = 809 Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 263/832 (31%), Positives = 430/832 (51%), Gaps = 51/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ ++ LT GLEVE+VD S + V+ V ++PD D Sbjct: 1 MQFPESWLRSFVNPPIATAELSHRLTMAGLEVEEVDPVAPPFSQIVVGHVVEVNKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G + +Q+VCGAPNV VG ++G PPG + + K+RG+ Sbjct: 61 RLNVCKVDAGTGELLQIVCGAPNVSVGIKVPCAMVGAELPPGD--DGKPFKIKIGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D ++ LP D PVG + L+L D I + LTPN++DC+ + Sbjct: 119 ESYGMLCSARELKLSEDHGGLLILPEDTPVGADIRKVLDLDDQIFVIKLTPNKADCLSIH 178 Query: 173 GIALDLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + V+A G + P++ S+ +P+++ + LC FA ++GV Sbjct: 179 GVARE-VSALTGAPITLPTMAPVAVTLSDKLPVKV----EAPDLCGRFAGRIIRGVNARA 233 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM R++ G+RS+SALVDI+NYV L+ G PSHVFD +I LTVR GE++ Sbjct: 234 KTPAWMVSRIERAGMRSVSALVDISNYVMLELGRPSHVFDLDKIHGGLTVRWGKPGEQLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ + VI+ + I+S+AGI+GG +T ++ VE A W P I + Sbjct: 294 LLNGDTVTVDDKVGVISDEQAIESLAGIMGGDKTAVTLDTQNIYVEAAFWWPAAIQGRAR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 TD+ +RFERGVD ++ ++ I +LIL +CGG A I + + R+ V M Sbjct: 354 RYNFSTDAGHRFERGVDYATIVEHIERISALILDICGGQAGPID-DQIVNLPKREPVRMR 412 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ GI + + + +RLG + + D F V PS+R D+E + DL+EE+ RIY Sbjct: 413 VARAARVLGIALSHDVVADVFKRLGLTFSVDGDVFVVEPPSYRFDIEIEEDLIEEVARIY 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G +QI ++P P+ E+ + + RT + V+ +A+R EVVN++F+ E F G Sbjct: 473 GFEQIPAKP-PVA--ENAMRPTNEARRTMHDVRHAVAARDYHEVVNFAFVETEWEADFAG 529 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + +LNPI++ S MR++L+ GLL N++R + +FEV V+ D Sbjct: 530 NTQPIPLLNPIASQYSVMRSTLISGLLDKVRYNLNRKASRVRLFEVGRVFRRDAEVADGG 589 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + + + G + +EE+ R VD FD K D S++ P + RFE Sbjct: 590 LS--VAGYAQPMRVGGIAYGPAAEEQWGVPARAVDFFDVKGDVESLLWPLQA----RFER 643 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ + +G+ GE HP L + L +E+ LD+ I+ Sbjct: 644 AEHPALHPGRAARVVLDGR-AIGWIGELHPRWLQKYELPTAPVVWELDLDA--ITAVGLP 700 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV------DRLIDDVTVFDVFQGK 756 ++V + + V RD+A +V Q + LV+ + R + V +FD F+ K Sbjct: 701 AYREVPRVPA---VTRDIALVVRQDVVVQDLVDAFEKAAAGMPWQRYLQGVVLFDEFRPK 757 Query: 757 ----SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS+A ++ +Q T +DD + +++ A LR+ Sbjct: 758 AATAAIGAQEKSLAFRITLQDTDSTLQDDLVEAATQQLIRAAGDAFGARLRA 809 >gi|167037189|ref|YP_001664767.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166856023|gb|ABY94431.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 794 Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 256/821 (31%), Positives = 431/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +LSWLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MLVSLSWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMC Sbjct: 61 KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ + G Sbjct: 120 SAEELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A K K + S + P ++ + D LC + VK V+ +P W Sbjct: 179 IAREVAATFKKKFKMPVVEVNESEKQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD Sbjct: 237 MQMRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAKEGEKLVTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L +VIA + +AG++GG++ D T ++L+E A + NI + K LG+ Sbjct: 297 KERTLDSSMLVIADEKEAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +++ RFE+G+D + + + L+ CGGT + + ++ +N + Sbjct: 357 RSEASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G ++P + ILE L F V+ + D E++VP +R+DV +AD+ EEI R++G + Sbjct: 417 NRFLGTELPTSQMIEILESLEFKVLQKGDDLEITVPHFRRDVTMEADIAEEIARLFGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGG 526 I+ + Q ++ +Q +K VL + E+V SF+ K L Sbjct: 477 IQDSLMKNAQT-TLGAMTKEQELEEKIKEVLLVCGLNEIVTISFMGSKDLDKINVPLDSP 535 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQK 585 ++ ++I+NP+ D S MRT+LLP +L N R + DF +FE+S V+ + P K Sbjct: 536 LRKAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKVFMPKELP--LK 593 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESG 643 + I+ + G+ G + VD + K +AL + ++ +R E Sbjct: 594 ELPQEIKTIAIGMYG-------------KDVDFYSLKGVIEALFEVMGIKGVEYVRAED- 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 PS YHPGRS I E LG FGE HP++L+ + + + G E+ LD + + Sbjct: 640 -PS-YHPGRSAKILLGDE-TLGIFGEIHPDVLENYDIPVRVYGGEINLDKV---IQYANV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 K+ + L V+RD+A +VD+ I + +I + +LID V +FDV++G ++ EGK Sbjct: 694 EKRYMPLPKYPAVERDIAVLVDRDIFVKDVEKVILETGGKLIDKVELFDVYKGPNIPEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVA + + + T D+++ ++ + IVE + KK A LR Sbjct: 754 KSVAFSIWYRSYERTLTDEEVNVIHNNIVEALDKKLGAKLR 794 >gi|121594736|ref|YP_986632.1| phenylalanyl-tRNA synthetase subunit beta [Acidovorax sp. JS42] gi|120606816|gb|ABM42556.1| phenylalanyl-tRNA synthetase beta subunit [Acidovorax sp. JS42] Length = 814 Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 256/842 (30%), Positives = 420/842 (49%), Gaps = 67/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE++ + PFT + ++ +++P+ Sbjct: 1 MQFPESWLREFCNPPLNTQELADTLTMAGLEVEEL--QPVAPPFTKIVVGEIKDAQQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN RVG ++G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQGEPLTIVCGAPNARVGIKVPCAMVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ELP DAP+G + YL L D + + LTPN + C+ Sbjct: 117 GVESFGMLCSARELKLSEDHGGLLELPADAPLGQNIRQYLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V GIA ++ A LK P + +I + + LC F+ V+ V A Sbjct: 177 VYGIAREVSALTGAPLKAPQF--PAMTTAIDDRLPVRVSAPDLCGRFSGRVVRNVNTQAA 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +I L VR +GE++ Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFEFGRPSHIFDLDKIHGGLEVRWGKAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T ++ VE A W P +A + Sbjct: 295 LNGNTVTVDEKVGVIADEREVESLAGIMGGDATAVSDDTRNIYVEAAFWWPEAVAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA---RNITYKPRKIVF 406 TD+ +RFERGVD + + ++ I LI+ +C GT C + + + V Sbjct: 355 YNFSTDAGHRFERGVDPELTVEHIERITQLIVDIC-GTPETACAPIDDQRVNMPAQTPVR 413 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 M + ++ G+ + + L RLG + E V+ PS+R D+ + DL+EE+ R Sbjct: 414 MRIARAAKVIGMPLTQAQCVDALRRLGLPLQEEEGAVTVTPPSFRFDLRLEEDLIEEVAR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 + G + + + P PL + K L + R+ + V+R LA+ E +N+SF+ + Sbjct: 474 VVGYNNLPTTP-PLAPITPK--LCAESRRSSFAVRRELAALGYQETINFSFVEEHWEKEL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 G +++LNPI++ +S MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 531 AGNAAPIKLLNPIASHLSVMRSSLLGSLLQVLKFNLDRKAGRVRVFELGRVFLRDASVQN 590 Query: 580 ---TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 T EG Q AG+ G++ GR DK+ VD +DAK D +++ P Sbjct: 591 TDRTVEGFAQPMRVAGLAYGAADALQWGR--KDKA------VDFYDAKGDVEALLAPLRP 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 FE A HPGR + + + G+ GE HP + L FE+ LD+ Sbjct: 643 T----FEPAAHPALHPGRCARVLLEGQPI-GFVGELHPQWRQSWDLPAAPMMFELELDA- 696 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + Q+K + V + V+RD+A +V + + ++ I L+ +FDV Sbjct: 697 -VLQRKVPGFRPV---AKRQLVERDIAVVVAERVSHDEVMRAIGGALAGDLLRSAVLFDV 752 Query: 753 FQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 F+ + +L +G+KS+AI++ + D +I + +++ + T A Sbjct: 753 FRPQPQRAGEAVPAGALAQGEKSLAIRLTLGSDAAALTDAEIEAAVQSVLQALGTHTGAR 812 Query: 802 LR 803 LR Sbjct: 813 LR 814 >gi|88607984|ref|YP_506312.1| putative phenylalanyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] gi|88600153|gb|ABD45621.1| putative phenylalanyl-tRNA synthetase, beta subunit [Neorickettsia sennetsu str. Miyayama] Length = 876 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 276/913 (30%), Positives = 436/913 (47%), Gaps = 146/913 (15%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MKFT WL +HLDT +SLE++ + L S+G EVE F + +V ++P D Sbjct: 1 MKFTFGWLLEHLDTTLSLEQVVEALISLGFEVENC--HSIGRGFIVAQVTECNKHPGADR 58 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 L QE+Q+VCGAPNVR GL V A G+ +P N M + KIRG ES GM+CS Sbjct: 59 LTLCKVFDGTQELQIVCGAPNVRGGLKVVLAQVGAVLPCNMMKIKKSKIRGCESLGMLCS 118 Query: 121 EKELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL L D I+EL D VG + DP+I++++TPNR D + V G+A +L Sbjct: 119 LEELGLPGGDKGGIIELSDDYRVGDAFT-----VDPLIEIAVTPNRGDMLSVYGVARELA 173 Query: 180 AAGLGKL------------KEIN----------------------ISCPLS---SESIPL 202 A G G L E N +S PL+ ++ Sbjct: 174 AGGYGVLIGTYKPSFDGLYTERNHESGWHDSCEVENITPNHGSNVLSSPLTDSQGSAVVD 233 Query: 203 EIKFDL--------DDSSL---------CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRS 245 E+ +L DD+++ C+ F+ ++ V+N V+P+W+R +++ VG++S Sbjct: 234 ELASNLLKKDANVEDDANILFNICDSTACRKFSGLVIRNVKNCVSPDWLRNKVERVGVKS 293 Query: 246 ISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVI 304 ISALVDI NYV G P H++D +I+ + L V + + AL+++EY + P +++I Sbjct: 294 ISALVDIANYVMFSYGLPLHIYDLDKIAGETLQVSVSDEESYLAALNDKEYRVPPGSIII 353 Query: 305 AS-DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 D ++Q++AGIIG K C +T ++ +E A+++P+ +A + + + I T+S YRFERG Sbjct: 354 RDRDMQLQAVAGIIGSKLGACTLSTRNIFIEAAVFNPVMVASTKRAMKINTESAYRFERG 413 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVKRLSGIDVPIE 422 VD L LI +C G I T K + F S +L+GI++ Sbjct: 414 VDPYFTEKALVLAAQLISDVCAGEKEK--IESFFTKDESKFIDFSLSFFSKLTGIELDSS 471 Query: 423 DSLRILERLGFSV------------------------------------------IGEYD 440 +++IL+ LGF V +G Sbjct: 472 KAIQILKGLGFEVHEMRMPHYRTCSESHSDNTNVGNRKNLATEDSIGNTHVSTAEVGVSS 531 Query: 441 K-----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 K F V PSWR DV +A + EE+LR+YG Q++S PL + K + + S+ Sbjct: 532 KKDLQIFRVVPPSWRSDVITQACIAEELLRVYGYAQLRSTPL-----KSKIPVIFETSKE 586 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 ++ +L +R EVV W FIS+++ + L I NP+ A+ + MR S++P L++ Sbjct: 587 DRIRELLLNRGFSEVVTWPFISEKKC---SANENILRIKNPLGAEFNVMRPSIIPNLVEV 643 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 RN+ + IFE+ +Y +K M AG+ G S + E+ Sbjct: 644 AQRNIKNGLHVIKIFEIGKIYSTIC---EKKMLAGLIYGDS--------FPRNMHEKAHK 692 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFES-GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 +D FDAKAD +++ FE PS YHPG+ +K + V G+ GE HP + Sbjct: 693 MDFFDAKADVEALLTSLDLGGRYSFEKCDGPSLYHPGKVSNVKIEGKEV-GFIGELHPRV 751 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD-QHIPA-GT 732 + I FE++LD + + K + T V+RD +F+ D +P G Sbjct: 752 AS----NRQITIFELFLDKLACNLKLKENT-----FGKFPIVERDFSFVFDLDKVPLWGD 802 Query: 733 LVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + + + I +VT+FD ++G G+ S+A V ++ ++I+ L D+I+ Sbjct: 803 IERGLYLISDFIKNVTLFDKYEGDFKGKRMLSLAFFVSMENQTHGLSQEEIKSLSDQIIC 862 Query: 793 NVVKKTNAVLRSS 805 V K + LR S Sbjct: 863 FVQGKFSGTLRLS 875 >gi|227510507|ref|ZP_03940556.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190159|gb|EEI70226.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 803 Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 251/831 (30%), Positives = 428/831 (51%), Gaps = 56/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + +WLK +L+ D+ + + + + +EV+ VD E L I VLS+ +PD D Sbjct: 1 MKVSYNWLKKYLNLDIPAKDLAEKIERTAVEVDSVDIAEEGLKKLVIGHVLSMTSHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A PGS I N+ + K+RG+ES GM+ Sbjct: 61 HLHVCSVDVGEEEPLQIVCGAPNVDAGQKVIVALPGSRIG-GNVKIKRSKMRGVESEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ E+ S D + I PVG + YL + DPIID+ +TPNR D + + Sbjct: 120 CALDEIGFSKDVVPKEWADGIYVFDDSVPVGEPVYHYLGMDDPIIDLDVTPNRGDMLSIL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNN 228 G +L A + +I P+ E L EIK D+SL K + + +KGV+ Sbjct: 180 GTVHELAAI---YDQHPDIKKPVVHEDSALNANDEIKAS-SDNSLAKTYKLRVIKGVKIA 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P+W++ L G+R I+ +VD+TNY+ + G P H FD +I + VR A GEKI Sbjct: 236 PSPSWLQITLWNAGVRPINNVVDVTNYILMKYGQPLHSFDEDKIDGDIQVRLAQKGEKIT 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +++DLSP+++VIA + ++AG++GG + D+ TT+V++E A++D I I ++ + Sbjct: 296 TLDEEDHDLSPEDIVIADNDHPIALAGVMGGYNTQIDEQTTNVVLESAIFDSIRIRKTAQ 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFM 407 + +++ RFERG++ G+ + V+LI L GG A I A + I Sbjct: 356 RHVLHSEASQRFERGINPDGVEDAINEAVNLIQKLAGGKVAKGIVTASEYHPELPTIFIT 415 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G ++ IED I +RLGF + D V++P+ R D+ +ADL EE+ RIY Sbjct: 416 AARTNHVLGTNLKIEDIKAIFDRLGFISEKQSDGLNVTIPARRWDIHIEADLFEEVARIY 475 Query: 468 GVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G D LP T ++ L+ Q R + +L + + +++S ++E++ LF Sbjct: 476 GYDN-----LPATLPTGRQTIGVLTSAQKVQRAARHILEGLGLTQAISYSLTTEEKAQLF 530 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--- 580 + +L ++L+P++ D S +R +LL GLL N + D A++E V+ DT Sbjct: 531 MMRESKLTKLLSPMTQDHSTLRMNLLSGLLDDVSYNHAHKVNDVALYETGRVFYKDTDDQ 590 Query: 581 --PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 P+ +++A + +G L + VD +D K +++ F+ + Sbjct: 591 VRPDEVEHVAGVV---------TGNLTDPSWNNHVKSVDFYDLKG----IVDQFIENLGI 637 Query: 639 R--FESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 E A + Y HPGR+ I V G+ G+ HP I F + FE+ L + Sbjct: 638 NGDIEYTATNKYPEMHPGRTADISIHGHYV-GFIGQVHPKITKQFKIKE-TYAFELNLQT 695 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDV 752 + I K +V+ S V+RD++F+VD + +VN++K + D+ +FD+ Sbjct: 696 L-IDLPKSDDQYQVI--SKYPSVERDISFLVDSDVTNDQIVNLMKKRGGAFLHDIRLFDI 752 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G ++ +GKKS+A + ++T +D+ + ++I + + + NA +R Sbjct: 753 YDGANVPDGKKSMAYSLHYVNPRETLKDEVVTTAFEKIKKRLTDELNAEIR 803 >gi|222110651|ref|YP_002552915.1| phenylalanyl-tRNA synthetase subunit beta [Acidovorax ebreus TPSY] gi|221730095|gb|ACM32915.1| phenylalanyl-tRNA synthetase, beta subunit [Acidovorax ebreus TPSY] Length = 814 Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 256/842 (30%), Positives = 419/842 (49%), Gaps = 67/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE++ + PFT + ++ +++P+ Sbjct: 1 MQFPESWLREFCNPPLNTQELADTLTMAGLEVEEL--QPVAPPFTKIVVGEIKDAQQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN RVG ++G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQGEPLTIVCGAPNARVGIKVPCAMVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ELP DAP+G + YL L D + + LTPN + C+ Sbjct: 117 GVESFGMLCSARELKLSEDHGGLLELPADAPLGQNIRQYLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V GIA ++ A LK P + +I + + LC F+ V+ V A Sbjct: 177 VYGIAREVSALTGAPLKAPQF--PAMTTAIDDRLPVRVSAPDLCGRFSGRVVRNVNTQAA 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +I L VR +GE++ Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFEFGRPSHIFDLDKIHGGLEVRWGKAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T ++ VE A W P +A + Sbjct: 295 LNGNTVTVDEKVGVIADEREVESLAGIMGGDATAVSDDTRNIYVEAAFWWPEAVAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA---RNITYKPRKIVF 406 TD+ +RFERGVD + + ++ I LI+ +C GT C + + + V Sbjct: 355 YNFSTDAGHRFERGVDPELTVEHIERITQLIVDIC-GTPETACAPIDDQRVNMPAQTPVR 413 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 M + ++ G+ + + L RLG + E V+ PS+R D+ + DL+EE+ R Sbjct: 414 MRVARAAKVIGMPLTQAQCVDALRRLGLPLQEEEGAVTVTPPSFRFDLRLEEDLIEEVAR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 + G + + + P PL + K L + R+ + V+R LA+ E +N+SF+ + Sbjct: 474 VVGYNNLPTTP-PLAPITPK--LRAESRRSSFAVRRELAALGYQETINFSFVEEHWEKEL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 G +++LNPI++ +S MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 531 AGNAAPIKLLNPIASHLSVMRSSLLGSLLQVLKFNLDRKAGRVRVFELGRVFLRDASVQN 590 Query: 580 ---TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 T EG Q AG+ G++ GR DK+ VD +DAK D +++ P Sbjct: 591 TDRTVEGFAQPMRVAGLAYGAADALQWGR--KDKA------VDFYDAKGDVEALLAPLRP 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 FE A HPGR + + G+ GE HP + L FE+ LD+ Sbjct: 643 T----FEPAAHPALHPGRCARVLLEGHPI-GFVGELHPQWRQSWDLPAAPMMFELELDA- 696 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + Q+K + V + V+RD+A +V + + ++ I L+ +FDV Sbjct: 697 -VLQRKVPGFRPV---AKRQLVERDIAVVVAERVSQDEVMRAIGGALAGDLLRSAVLFDV 752 Query: 753 FQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 F+ + +L +G+KS+AI++ + D +I + +++ + T A Sbjct: 753 FRPQPQRAGEAVPAGALAQGEKSLAIRLTLGSDAAALTDAEIEAAVQSVLQALGTHTGAR 812 Query: 802 LR 803 LR Sbjct: 813 LR 814 >gi|320115607|ref|YP_004185766.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319928698|gb|ADV79383.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 792 Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 255/819 (31%), Positives = 430/819 (52%), Gaps = 45/819 (5%) Query: 3 FTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLDCA 61 +LSWLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MSLSWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNADKL 60 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMCS Sbjct: 61 LVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMCSA 119 Query: 122 KELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ + GIA Sbjct: 120 EELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A K K + S + P ++ + D LC + VK V+ +P WM+ Sbjct: 179 REVAATFKKKFKMPVVEVNESEKQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQE 294 RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD +E Sbjct: 237 MRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAKEGEKLVTLDGKE 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA + +AG++GG++ D T ++L+E A + NI + K LG+ + Sbjct: 297 RTLDSSMLVIADEKEAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ RFE+G+D + + + L+ CGGT + + ++ +N + R Sbjct: 357 EASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINR 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++P + ILE L F V+ + D E++VP +R+DV +AD+ EEI R++G + I+ Sbjct: 417 FLGTELPTSQMIEILESLEFKVLQKGDDLEITVPHFRRDVTMEADIAEEIARLFGYNNIQ 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGGGQ 528 + Q ++ +Q +K VL + E+V SF+ K L + Sbjct: 477 DSLMKNAQT-TLGAMTKEQELEEKIKEVLLVCGLNEIVTISFMGSKDLDKINVPLDSPLR 535 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYM 587 + ++I+NP+ D S MRT+LLP +L N R + DF +FE+S V+ + P K + Sbjct: 536 KAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKVFMPKELP--LKEL 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESGAP 645 I+ + G+ G + VD + K +AL + ++ +R E P Sbjct: 594 PQEIKTIAIGMYG-------------KDVDFYSLKGVIEALFEVMGIKGVEYVRAED--P 638 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 S YHPGRS I E LG FGE HP++L+ + + + G E+ LD + + K Sbjct: 639 S-YHPGRSAKILLGDE-TLGIFGEIHPDVLENYDIPVRVYGGEINLDKV---IQYANVEK 693 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + L V+RD+A +VD+ I + +I + +LID V +FDV++G ++ EGKKS Sbjct: 694 RYMPLPKYPAVERDIAVLVDRDIFVKDVEKVILETGGKLIDKVELFDVYKGPNIPEGKKS 753 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VA + + + T D+++ ++ + IVE + KK A LR Sbjct: 754 VAFSIWYRSYERTLTDEEVNVIHNNIVEALDKKLGAKLR 792 >gi|193076386|gb|ABO11053.2| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter baumannii ATCC 17978] Length = 793 Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 256/828 (30%), Positives = 418/828 (50%), Gaps = 58/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAILP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V A P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVDITNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDITNYVLMELGQPMHAFDLAKIEGTVHVRQAKPKEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQDDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKSDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + D ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTVQADGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 SPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLK 587 Query: 586 ------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSL 638 +A G R+ S W K + +D FD K + ++ V ++ + Sbjct: 588 QIPTLALVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYV 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 636 RSER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ 688 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ Sbjct: 689 ---SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQG 745 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 746 VEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|289578707|ref|YP_003477334.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter italicus Ab9] gi|289528420|gb|ADD02772.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter italicus Ab9] Length = 794 Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 254/822 (30%), Positives = 426/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MLVSLLWLKEFVDIDEDAKIISEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMC Sbjct: 61 KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S KEL L + I LP P+G +++ L+L D +++ +TPNR DC+ + G Sbjct: 120 SAKELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A K K I S E P ++ + D LC + VK V+ +P W Sbjct: 179 IAREVAATFKKKFKMPMIEVKESEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD Sbjct: 237 MQIRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAKEGEKLVTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L +VIA + + +AG++GG++ D T ++L+E A + NI + K LG+ Sbjct: 297 KERILDSSMLVIADEKKAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +++ RFE+G+D + + + L+ CGGT + + ++ +N + Sbjct: 357 RSEASSRFEKGLDPEVTVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G ++P + ILE L F VI + + EV+VP +R+DV +AD+ EEI R+YG + Sbjct: 417 NRFLGTELPTSQMIEILESLEFKVIEKGNDLEVTVPHFRRDVTMEADIAEEIARLYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGG 526 I+ + + L+ +Q + VL + + E+V SF+ K L Sbjct: 477 IEDSLMKNAET-TLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSS 535 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQK 585 ++ ++I+NP+ D S MRT+LLP +L N R + +F +FE+S V+ + P K Sbjct: 536 LRKAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQEFKVFEISKVFIPKELP--LK 593 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS---LDSLRFES 642 + I+ + G+ G VD F K +IE F+ + + + Sbjct: 594 ELPQEIKTVAIGMYGEN-------------VDFFSLKG----IIETFLEVMGIKGVEYVR 636 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 YHPGRS I E LG FGE HP++L+ + + + E+ LD + + Sbjct: 637 AEDPSYHPGRSSKILLGDE-TLGIFGEIHPDVLENYDIPVRVYAGEINLDKV---IQYSN 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 K+ + L V+RD+A +VD+ I + +I + +L+D V +FDV++G ++ EG Sbjct: 693 VEKRYIPLPKYPAVERDIAVLVDEDIFVNDVEKVILETGGKLVDKVELFDVYKGPNIPEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVA + + + T D+++ ++ + IVE + KK A LR Sbjct: 753 KKSVAFSIWYRSYERTLTDEEVSVIHNNIVEALDKKLGAKLR 794 >gi|260551931|ref|ZP_05825793.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter sp. RUH2624] gi|260405334|gb|EEW98829.1| phenylalanyl-tRNA synthetase beta subunit [Acinetobacter sp. RUH2624] Length = 793 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 261/824 (31%), Positives = 416/824 (50%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGLNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I +I E K + + + +K V A P WM Sbjct: 178 EIAVINQLQMNEPEIKS--VDATITDEKKVVISTEGAPR-YLGRVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVEVRQAKPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I IA P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITIAEKSDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + D ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYQVAAEFITDALTRLGCEVTVKADGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ Sbjct: 528 NPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQDANSIQDLK 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 Q A I GS E W K + +D FD K + V+ V ++ +R E Sbjct: 588 QIPTLALIAVGSREPES----WHAKPQP----MDFFDFKGEVEEVLAAGRVKVEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 SW HPG+S I + + GY G HP++ + LS + LD + Q + Sbjct: 640 ---SWLHPGQSAEILVDGKSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 LS V+RD+A ++ +I + +I K L+D +FDV+ G+ + EG Sbjct: 690 YVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQGVEEG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|33593556|ref|NP_881200.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella pertussis Tohama I] gi|41018306|sp|Q7VVR5|SYFB_BORPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33572912|emb|CAE42848.1| phenylalanyl-tRNA synthetase beta chain [Bordetella pertussis Tohama I] gi|332382963|gb|AEE67810.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella pertussis CS] Length = 805 Score = 364 bits (934), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 266/832 (31%), Positives = 434/832 (52%), Gaps = 55/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL+ ++ + +++ LT GLEVE+ + A PFT + +++ + +PD Sbjct: 1 MQFPESWLRSLVNPSIGTDELAHRLTMAGLEVEETE--PAAPPFTGVVVTRIVDIAPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G +Q+VCGAPN GL A G+ +P M + V K+RG++S+G Sbjct: 59 ADKLRVCQVDDGSGALLQIVCGAPNAAAGLTVPLARVGAELP-GGMKIGVAKMRGVQSSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++ELP G + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELPAALRPGTDIRAALDLDDTLFTLKLTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L ++ P ++E +P+ I L LC FA ++GV A P Sbjct: 178 EVAA-----LTGTPLTAP-AAEPVPVTIDHRLPVAIQAPDLCGRFAGRVIQGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+ RL+ G RS+SALVDI+NYV L+ G PSHVFD +I L+VR A GE + L+ Sbjct: 232 EWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIGGDLSVRWAREGETLELLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L P V+ + +++S+AGI+GG+ +T ++ +E A W P IA + Sbjct: 292 GQAVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTRNIYLEAAFWWPGAIAGRARRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMN 408 +++ +RFERGVD + ++ I LIL +CGG A D C+ + R+ V M Sbjct: 352 FSSEASHRFERGVDYASIPEHIELITRLILDICGGQAGPVDDQCVNLPV----REPVRMR 407 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ G+ V + +I RLG + D F V+ PS+R D+E + DL+EE+ R+Y Sbjct: 408 LARCHRVLGVAVERAEVAQIFTRLGLPFQEQGDDFVVTPPSYRFDIEIEEDLIEEVARVY 467 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I P P+ + K + + R + V+R++A+R EVVN+SF+ + G Sbjct: 468 GFERIPDVP-PVARA--KMHAQPEARRGAHAVRRLVAARDYQEVVNYSFVEAAWERDYAG 524 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + ++NPI++ +S MR+SL+ GL+ N +R + +FE+ V+ D Sbjct: 525 NDNPVRLVNPIASHLSVMRSSLIAGLVAIVRHNANRKQSRMRLFELGRVFHRDPQLADGP 584 Query: 587 M-AAGIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFE 641 + AG+R+ + +G W EE+ R VD +D K D ++ D+LRF Sbjct: 585 LEVAGVRQ---PLMLAGVAWGGAVEEQWGVPHRQVDFYDVKQDIEALFG--ARADALRFV 639 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGRS I+ + + G+ GE HP L + FE LD +++++ Sbjct: 640 ADRYPALHPGRSARIELDGQPI-GWLGELHPQWTQQADLHHAPVVFE--LDFEALAERRL 696 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDR-----LIDDVTVFDVFQG 755 +K LS V RDLA VD +PA +++ + + R ++ D VFDV++ Sbjct: 697 PAVRK---LSRQPVVVRDLALWVDAKLPAQAMLDTVAAAIARDPQLSVVQDAQVFDVWRE 753 Query: 756 KSLGE---GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K + +KS+A + +Q + T + + + RI + +V NA R+ Sbjct: 754 KPVAGQTVTEKSLAFRFWLQDTEVTLDEARVADCIARIKDALVAAHNARQRA 805 >gi|332141056|ref|YP_004426794.1| phenylalanyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] gi|327551078|gb|AEA97796.1| phenylalanyl-tRNA synthetase subunit beta [Alteromonas macleodii str. 'Deep ecotype'] Length = 795 Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 257/824 (31%), Positives = 416/824 (50%), Gaps = 51/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S ++ + L+ GLEV+ V+ + +V+ ++P+ D Sbjct: 1 MKFSEKWLREWVNPSLSAHELSEQLSMAGLEVDGVEPVAGDFKGVLVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ G + + +VCGAPN R G+ A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKINVGGDELLDIVCGAPNCRQGIKVAVAVVGAVLP-GDFKIKKAKLRGEPSFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + DYL L D I+V LTPNR+DC+G+RGIA ++ Sbjct: 120 CSFSELGISDDHDGIIELPADAPIGEDIRDYLGLDDNAIEVDLTPNRADCLGIRGIAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 + E ++ ++ L I DD+ C + VKGV A P W+ ++ Sbjct: 180 GVLNNLDVCEPEVAAVDATIDDKLSITLSADDA--CPRYLGRVVKGVNVKAASPLWLVEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H F+ + I + VR A GE + LD E L Sbjct: 238 LRRCGIRSIDPIVDVTNFVLLELGQPMHAFNLASIEGNINVRMANEGEALTLLDETEAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA D + ++AGI GG H+G T D+L+E A + I + G+ TD+ Sbjct: 298 QSNTLVIADDNKALAMAGIFGGLHSGVTTETQDILLESAFFSRDAIMGRARQYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEVKRLS 415 +R+ERGVD ++ +L+L +CGG A + +A + K + + R+ Sbjct: 358 HRYERGVDPLLQRKAMERATALVLEICGGEAGPVVEAVAEDKLPKQATVTLRRERLARVL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GI + +L RLG V +E PS+R D+ + DL+EEI R+YG + I + Sbjct: 418 GISIDDAKVTEMLNRLGLDVTQTEAGWEAVAPSYRFDISIEEDLIEEIARVYGYNNIPN- 476 Query: 476 PLPLTQVEDKRNLSLQQSRT-----RYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQR 529 V K L++ S+ +K +L SR E + +SF+ K Q+ LF + Sbjct: 477 ------VAPKATLAMLPSQEAKLPLNTMKSLLLSRGYNEAITYSFVDPKIQNALF-PDVK 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--HVYENDTPEG--QK 585 + + +PIS+DMS MR SL PGL+ A N R +FE + + D P G Q+ Sbjct: 530 GMVLPHPISSDMSVMRVSLWPGLVGAAAYNQKRQQQRIRLFETGLRFIPQQDAPNGVLQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRF----VDLFDAKADALSVIEPFVSLDSLRFE 641 + G+ G ++EE VD FDAKAD +++ F Sbjct: 590 QVIGGVVAGR------------RNEEHWDLGDSPVDFFDAKADVEALLALTGKQGEFTFV 637 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 +G S HPG + I + E V GY G HP G++ + FE+ +D+I Sbjct: 638 TGQHSALHPGMTAKILLNDEEV-GYIGAIHPQFTKLLGVNGRVFVFELAVDAI-----TE 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 K V +S +RD+A V + G +++ I+ V++L+ + +FD ++GK + Sbjct: 692 RKLPSAVPVSRFPSNRRDIAITVKDEVRVGNVLSYIEKIGVNQLV-ALNLFDEYKGKGIE 750 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A+ + +Q T + +I+ +D +V+ + + A LR Sbjct: 751 PGYKSLALSLHLQDPDKTLEEAEIQQAVDTVVKGLESEFGAALR 794 >gi|325831701|ref|ZP_08164918.1| phenylalanine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] gi|325486572|gb|EGC89021.1| phenylalanine--tRNA ligase, beta subunit [Eggerthella sp. HGA1] Length = 812 Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 247/833 (29%), Positives = 437/833 (52%), Gaps = 52/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +L WL +++D + CD L G VE ++ +A + V + E++PD D Sbjct: 1 MKVSLKWLSEYVDVPSDTKAFCDRLDLTGTGVEAIEKTGDAYDGVVVGYVETCEQHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +Q+VCGAPN+ G+ A G+ +P + + K+RG+ S GM Sbjct: 61 HMHVVTVDVGAGEPVQIVCGAPNIAQGIKVPVATIGAVLP-GDFKIKKSKLRGVTSCGMC 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS++EL + + I LP DAPVG ++DYL+LSD ++D+ +TPNR DC+ + G+A ++ Sbjct: 120 CSQRELGMGSNHEGIWILPEDAPVGMPIADYLKLSDTVLDLEVTPNRPDCLSMAGMAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A +K I +++ P ++ ++ D+S C + +K V+ +P+W+ + Sbjct: 180 GAMYRTDVKRPQIDLVEDADATPASDQVSVEIADASRCCRYTARVIKDVQVGPSPDWLAE 239 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-----LTVRRACSGEKILALD 291 R+ A G RSI+ +VD+TNY+ G P H FD +++ + VR A GE+ LD Sbjct: 240 RVAAAGARSINNIVDVTNYILFLLGQPLHAFDFDKLAGADGKAHIVVRPAAEGERFTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++ L PD VIA+ R ++AG++GG + TT VL+E A +D + +R+ +NLG Sbjct: 300 GEDRQLVPDMTVIATPERAVALAGVMGGLETEVTEATTTVLLEAAAFDRAHTSRTSRNLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFM 407 +I++S R+ERGVD + +LI + GGT D+ + + +P + F Sbjct: 360 LISESSMRYERGVDDNPVALNADMAAALIAEVSGGTVCPGMVDVWLEKT---EPIDLEFR 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + G ++P E+ + IL RLG V + D V+ P++R D+E + DL EE++R Sbjct: 417 VPRFCAMMGAEIPREEVVDILSRLGCEVSDADDADVLSVTAPTFRPDLEREIDLYEEVVR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNWSF-----ISKE 519 ++G+D+I P L + Q + + + R + + + E + +SF + + Sbjct: 477 LWGMDRI---PATLPGGRGRYGTRSQVEHVSDVIHRTMCASGLNETMTYSFAEPGDLDRL 533 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 + G GQ +E++NP++AD S MR S++PGL+++ N R + + ++E+ V+ Sbjct: 534 RMSHEGLGQ-PVELINPLNADQSVMRQSIVPGLMRSVAYNQSRGVKNVQLYEMGAVFFAT 592 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + ++ AG+ G+ G G W+ D FD K A+ + ++L Sbjct: 593 QGKKQPKERRRLAGVMAGAMGDAG----WNSAPAA----FDFFDGKG-AIENLARELALP 643 Query: 637 SLRFES----GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 LRF++ AP PGR+ + S LG+ GE HP +D F + P+ FE+ +D Sbjct: 644 KLRFKALSADEAPH-LQPGRAAAV-LSGGTELGWVGELHPLAVDAFDATAPVVAFELDVD 701 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFD 751 ++ S + + V + + V D+AF+VD+ + LV + + +L++DV +FD Sbjct: 702 ALAKSAR---PARDYVDVPTFPAVSMDVAFVVDEGVAHEKLVQCMTSAGGKLLEDVRLFD 758 Query: 752 VFQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++ ++ +G GKKS+A + + T +++ +R+V+ V T A +R Sbjct: 759 VYRDEARVGAGKKSMAYALTYRAADRTLTSEEVDKAHERLVKKVSSATGAEVR 811 >gi|295398828|ref|ZP_06808822.1| phenylalanyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] gi|294972918|gb|EFG48751.1| phenylalanyl-tRNA synthetase beta subunit [Aerococcus viridans ATCC 11563] Length = 809 Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 262/829 (31%), Positives = 437/829 (52%), Gaps = 46/829 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 MK + +WL + +D D++ + I + ++ G+EV+ V+ L + VL+ E +PD Sbjct: 1 MKVSYNWLNEFIDLADLNPQDIGERMSRTGIEVDGVNALGTGLKKIVVGHVLTCEPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++ G+ + Q+VCGAPNV G + A P S I N+ + K+RG+ S GM Sbjct: 61 DHLSITTVEVGEDEPFQIVCGAPNVAAGQKVIVALPNSRIA-GNVKIKKGKMRGVVSQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ S+ + IM LP +AP G + +YL+L DPII++ +TPNR+D + Sbjct: 120 ICSLEEIGFSNSVVPKEYADGIMVLPEEAPAGMDIVEYLKLDDPIIELDITPNRADAFSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNV 229 RG+A +L AA + + + E L DL D+ L + V+ V Sbjct: 180 RGVAWEL-AAVYNRQPNFDYTDITKYEGKDLAGAIDLKVADTELVPEYNAFLVRNVTVEP 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W++ RL A G+R I+ +VDITNYV L G P H FD ++ V+ R A GE+I+ Sbjct: 239 SPLWLQLRLMAAGIRPINNVVDITNYVLLANGQPLHAFDYDKLDHKVIETRLAKEGERIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L ++VI + ++AG++GG D+NTT+VL+E A ++PI+I ++ + Sbjct: 299 TLDEVDRPLLDSDIVITDGEKPIALAGVMGGLDTEIDENTTNVLIEAANFEPIHIRKTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG---TASDICIARNITYKPRKIV 405 G+ ++S R ERG++ + +I L G S+ A ++T P ++ Sbjct: 359 RNGLHSESSMRNERGINKATVAESGAFAAEMIADLAKGEVVEGSERVSAIDLT--PVQVT 416 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + V + G+D+ ED +I ++L F V G D+F VSVPS R D+ +ADLVEEI R Sbjct: 417 TSLAYVNKRLGMDLSYEDIQQIFKQLQFEVAGNGDEFTVSVPSRRWDISIQADLVEEIAR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D+I S LP ++ L+ Q+ R + + +V+ +S I Q+VL Sbjct: 477 IYGYDKIPSR-LPAVNAQN-MGLTDWQAFKRRTNNQMLAEGFNQVIAYSLIGDNQTVLEM 534 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + + + P+S D MRT+LL LL+ NV R +D AIFE V+ + D P Sbjct: 535 ANAKPVALDFPMSDDRRFMRTNLLSALLEIVQYNVARKTSDVAIFESGRVFKWADADLPV 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFE 641 + ++AA + G++ + WS + + VD +D K S+++ F +LD ++ FE Sbjct: 595 DETHLAA-VWTGNA----QAKTWS----HQAKAVDFYDMKGVVESILDSF-NLDVAVTFE 644 Query: 642 SGAP-SWYHPGRSGII----KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + + HPGR+ I ++ + LGY G+ HP++ D L + + FE+ LD I Sbjct: 645 ATSELADMHPGRTAKIYAVGQSDERVELGYIGQLHPSVADKHDLKDTLV-FEISLDEIYA 703 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVFDVFQ 754 K K + RD+AF+V + +V I+ + ++ D+ +FDV+Q Sbjct: 704 LPKVDVKQSTIPKFPG---SDRDIAFLVSDQVSNADVVKTIQKASKGGILVDIEIFDVYQ 760 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+++ +GKKS+A + + T D+++ + RI E + + +A +R Sbjct: 761 GENIEDGKKSLAYSLKYLNPQATLTDEEVTNDVARITEALTNELSAEIR 809 >gi|317488721|ref|ZP_07947258.1| phenylalanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] gi|316912188|gb|EFV33760.1| phenylalanyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA] Length = 812 Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 247/832 (29%), Positives = 437/832 (52%), Gaps = 50/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +L WL +++D + CD L G VE V+ +A + V + E++PD D Sbjct: 1 MKVSLKWLSEYVDVPSDTKAFCDRLDLTGTGVEAVEKTGDAFDGVVVGYVETCEQHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +Q+VCGAPN+ G+ A G+ +P + + K+RG+ S GM Sbjct: 61 HMHVVTVDVGAGEPVQIVCGAPNIAQGIKVPVATIGAVLP-GDFKIKKSKLRGVTSCGMC 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS++EL + + I LP DAPVG ++DYL+LSD ++D+ +TPNR DC+ + G+A ++ Sbjct: 120 CSQRELGMGSNHEGIWILPEDAPVGMPIADYLKLSDTVLDLEVTPNRPDCLSMAGMAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A +K I +++ P ++ ++ D+S C + +K V+ +P+W+ + Sbjct: 180 GAMYRTDVKRPQIDLVEDADATPASDQVSVEIADASRCCRYTARVIKDVQVGPSPDWLAE 239 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-----LTVRRACSGEKILALD 291 R+ A G RSI+ +VD+TNY+ G P H FD +++ + VR A GE+ LD Sbjct: 240 RVAAAGARSINNIVDVTNYILFLLGQPLHAFDFDKLAGADGKAHIVVRPAAEGERFTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++ L PD VIA+ R ++AG++GG + TT VL+E A +D + +R+ +NLG Sbjct: 300 GEDRQLVPDMTVIATPERAVALAGVMGGLETEVTEATTTVLLEAAAFDRAHTSRTSRNLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFM 407 +I++S R+ERGVD + +LI + GG+ D+ + + +P + F Sbjct: 360 LISESSMRYERGVDDNPVALNADMAAALIAEVSGGSVCPGMVDVWLEKT---EPVDLKFR 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + G ++P E+ + IL RLG V + D V+ P++R D+E + DL EE++R Sbjct: 417 VPRFCAMMGAEIPREEVVDILSRLGCEVSDADDADVLSVTAPTFRPDLEREIDLYEEVVR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF-----ISKEQ 520 ++G+D+I + LP + L+ + + R + + + E + +SF + + + Sbjct: 477 LWGMDRIPAT-LPGGRGRYGTRSQLEHV-SDIIHRTMCASGLNETMTYSFAEPGDLDRLR 534 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---E 577 G GQ +E++NP++AD S MR S++PGL++ N R + + ++E+ V+ + Sbjct: 535 MSHEGLGQ-PVELINPLNADQSVMRQSIVPGLMRNVAYNQSRGVKNVQLYEMGAVFFATQ 593 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 ++ AG+ G+ G G W+ D FD K A+ + ++L Sbjct: 594 GKKQPKERRRLAGVMAGAMGDAG----WNSAPAA----FDFFDGKG-AIENLARELALPK 644 Query: 638 LRFES----GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 LRF++ AP PGR+ + S LG+ GE HP +D F + P+ FE+ +D+ Sbjct: 645 LRFKALSADEAPH-LQPGRAAAV-LSGGTELGWVGELHPLAVDAFDATAPVVAFELDVDA 702 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDV 752 + S + + V + + V D+AF+VD+ + LV + + +L++DV +FDV Sbjct: 703 LAKSAR---PARDYVDVPTFPAVSMDVAFVVDEGVTHERLVQCMTSAGGKLLEDVRLFDV 759 Query: 753 FQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ ++ +G GKKS+A + + T +++ +R+V+ V T A +R Sbjct: 760 YRDEARVGAGKKSMAYALTYRAADRTLTSEEVDKAHERLVKKVSSATGAEVR 811 >gi|158523049|ref|YP_001530919.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] gi|158511875|gb|ABW68842.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfococcus oleovorans Hxd3] Length = 803 Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 260/825 (31%), Positives = 429/825 (52%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +L WL++++ +S + + LT GLEVE V +R A L KV V +PD D Sbjct: 1 MKVSLHWLQEYVPVTLSPADLAEALTMAGLEVEAVSDRYAGLDTVVTGKVTRVSSHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++TG + + +VCGAPNV+ G++ A PG+ +P + V KIRG+ S GM+ Sbjct: 61 RLTVCQVETG-DRPLTIVCGAPNVKEGMVAAVALPGTELP-GGLAVRKSKIRGVASEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +D A I+ L PVG + L L D ++++ LTPNR+DC+ + G+A ++ Sbjct: 119 CSAVELGIGEDGAGILSLDGATPVGIPATRALNLFDTVLEIDLTPNRADCLSMIGVAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G++ S P ++ + +++ LC + V V +P W++ RL Sbjct: 179 AALSGGRVARPVSSVPEAAGDVADYASIVIEEPDLCPRYTARVVLDVTVGPSPFWLQDRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 ++VGL+ I+++VDITN+V ++ G P H FD R+S + + VRRA +GE+ + LD++E L Sbjct: 239 RSVGLKPINSVVDITNFVMMETGQPLHAFDLDRLSGNRIVVRRAGAGERFVTLDDKERVL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S D ++I + ++AG++GG ++ T VL+E A + +I ++ K LG+ +D+ Sbjct: 299 SDDMLMICDAEKPVAVAGVMGGLNSEIVPTTRRVLIESACFAAPSIRKTAKTLGLASDAS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRL 414 +RFERGVD +G + L+ + GG + I + +P ++I + R Sbjct: 359 HRFERGVDPEGTEFAVDRAARLMAEVAGGKPARGVIDNH--PRPAGEKRIALGIGDTNRR 416 Query: 415 SGIDVPIEDSLRILERLG-FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G + ED R+L + S + D+ V+VPS+R D++ DL+EE+ R++G + I Sbjct: 417 LGTSLGAEDVARLLASVELLSEPEDNDRLTVTVPSFRVDIDRPEDLIEEVARLWGYNNIA 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRE- 530 P+ V + R R VK + EVVN+SFI + S+ F G E Sbjct: 477 VS-FPVIPVSGRLPSGALARRIR-VKEAMVGFGFAEVVNYSFIGADACSSMRFAAGTAED 534 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 + ILNP+S D + MRTSL+PGLLK T N+ + +FE V+ + P+ + Sbjct: 535 SPIPILNPLSQDQAVMRTSLVPGLLKNTRDNIFQQEKTIRLFETGKVFLPQPGQELPD-E 593 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL---FDAKADALSVIEPFVSL--DSLR 639 M AG+ G+ R W EERC F D+ +A AL + F +L D R Sbjct: 594 PEMLAGLWSGAR----QPRTWL-TMEERCDFYDIKGVLEALISALDLETSFSALAADQCR 648 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQ 698 + GR+ + E +G GE P++L+ FG+ P+ FE+ L ++ P+ Sbjct: 649 YTLA-------GRTARVMI-GETAVGLAGEVRPDVLESFGVRQPVFVFEINLSTLFPMIT 700 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKS 757 +R +S V RD+ IV + A L+ ++ LI+ + + DV++G Sbjct: 701 DERCARP----ISRFPSVSRDITLIVASTVEAADLLKSLAMQGQSLIEQMYLMDVYEGDP 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 + GKKS++I+V+ + + T +D + + E +VK NA L Sbjct: 757 IPSGKKSLSIRVVYRSFEKTLKDAFVNRIHTETTEALVKAFNAEL 801 >gi|33601024|ref|NP_888584.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella bronchiseptica RB50] gi|41018309|sp|Q7WKR4|SYFB_BORBR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33575459|emb|CAE32537.1| phenylalanyl-tRNA synthetase beta chain [Bordetella bronchiseptica RB50] Length = 805 Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 264/832 (31%), Positives = 430/832 (51%), Gaps = 55/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL+ ++ + +++ LT GLEVE+ + A PFT + ++ + +PD Sbjct: 1 MQFPESWLRSLVNPSIGTDELAHRLTMAGLEVEETE--PAAPPFTGVVVAHIVDIAPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G +Q+VCGAPN GL A G+ +P M + V K+RG++S+G Sbjct: 59 ADKLRVCQVDDGSGALLQIVCGAPNAAAGLTVPLARVGAELP-GGMKIGVAKMRGVQSSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++ELP G + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELPAALRPGTDIRAALDLDDTLFTLKLTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L ++ P ++E +P+ I L LC FA ++GV A P Sbjct: 178 EVAA-----LTGTPLTAP-AAEPVPVTIDHRLPVAIQAPDLCGRFAGRVIQGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+ RL+ G RS+SALVDI+NYV L+ G PSHVFD +I L+VR A GE + L+ Sbjct: 232 EWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIGGDLSVRWAREGETLELLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L P V+ + +++S+AGI+GG+ +T ++ +E A W P IA + Sbjct: 292 GQAVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTRNIYLEAAFWWPGAIAGRARRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMN 408 +++ +RFERGVD + ++ I LIL +CGG A D C+ + R+ V M Sbjct: 352 FSSEASHRFERGVDYASIPEHIELITRLILDICGGQAGPVDDQCVNLPV----REPVRMR 407 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ G+ V + +I RLG + D F V+ PS+R D+E + DL+EE+ R+Y Sbjct: 408 LARCHRVLGVAVERAEVAQIFTRLGLPFQEQGDDFVVTPPSYRFDIEIEEDLIEEVARVY 467 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I P P+ + K + + R + V+R++A+R EVVN+SF+ + G Sbjct: 468 GFERIPDVP-PVARA--KMHAQPEARRGAHAVRRLVAARDYQEVVNYSFVEAAWERDYAG 524 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + ++NPI++ +S MR+SL+ GL+ N +R + +FE+ V+ D Sbjct: 525 NDNPVRLVNPIASHLSVMRSSLIAGLVAIVRHNANRKQSRVRLFELGRVFHRDPQLADGP 584 Query: 587 M-AAGIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFE 641 + AG+R+ + +G W EE+ R VD +D K D ++ D+LRF Sbjct: 585 LEVAGVRQ---PLMLAGVAWGGAVEEQWGVPHRQVDFYDVKQDVEALFG--ARADALRFV 639 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGRS I+ + + G+ GE HP L + FE+ +++ Sbjct: 640 ADRYPALHPGRSARIELDGQPI-GWLGELHPQWTQQADLHHAPVVFELDFEAL-----AE 693 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDR-----LIDDVTVFDVFQG 755 + V LS V RDLA VD +PA +++ + + R ++ D VFDV++ Sbjct: 694 RRLPAVRELSRQPAVVRDLALWVDAKLPAQAMLDTVAAAIARDPQLSVVQDAQVFDVWRE 753 Query: 756 KSLGE---GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K + +KS+A + +Q + T + + + RI + +V NA R+ Sbjct: 754 KPVAGQTVTEKSLAFRFWLQDTEVTLDEARVADCIARIKDALVAAHNARQRA 805 >gi|239500689|ref|ZP_04659999.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB900] Length = 793 Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 258/826 (31%), Positives = 417/826 (50%), Gaps = 54/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAILP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V A P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGAVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKADLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + D ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTIQADGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTR--YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + LP V+ L+ Q R +++ + + E +++SF + Sbjct: 475 QIS-LPNMDVQ----LAKYQDRFEIAQLRQTVVTLGYQEAISFSFADAKLEKQLNPQVSP 529 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK----- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 530 LMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLKQI 589 Query: 586 ----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRF 640 +A G R+ S W K + +D FD K + ++ V ++ +R Sbjct: 590 PTLTLVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYVRS 637 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 638 ER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---ITWVAELDQAAVLQ-- 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ + Sbjct: 689 -SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQGVE 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 748 EGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|33597180|ref|NP_884823.1| phenylalanyl-tRNA synthetase subunit beta [Bordetella parapertussis 12822] gi|41018307|sp|Q7W7C6|SYFB_BORPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33573607|emb|CAE37891.1| phenylalanyl-tRNA synthetase beta chain [Bordetella parapertussis] Length = 805 Score = 363 bits (931), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 264/832 (31%), Positives = 431/832 (51%), Gaps = 55/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL+ ++ + +++ LT GLEVE+ + A PFT + +++ + +PD Sbjct: 1 MQFPESWLRSLVNPSIGTDELAHRLTMAGLEVEETE--PAAPPFTGVVVARIVDIAPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G +Q+VCGAPN GL A G+ +P M + V K+RG++S+G Sbjct: 59 ADKLRVCQVDDGSGALLQIVCGAPNAAAGLTVPLARVGAELP-GGMKIGVAKMRGVQSSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++ELP G + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELPAALRPGTDIRAALDLDDTLFTLKLTPNRADCLSIFGVAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDL----DDSSLCKGFAMCCVKGVRNNVA-P 231 ++ A L ++ P ++E +P+ I L LC FA ++GV A P Sbjct: 178 EVAA-----LTGTPLTAP-AAEPVPVTIDHRLPVAIQAPDLCGRFAGRVIQGVNARAATP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM+ RL+ G RS+SALVDI+NYV L+ G PSHVFD +I L+VR A GE + L+ Sbjct: 232 EWMKTRLERAGQRSVSALVDISNYVMLEVGRPSHVFDLDKIGGDLSVRWAREGETLELLN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L P V+ + +++S+AGI+GG+ +T ++ +E A W P IA + Sbjct: 292 GQAVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTRNIYLEAAFWWPGAIAGRARRYK 351 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMN 408 +++ +RFERGVD + ++ I LIL +CGG A D C+ + R+ V M Sbjct: 352 FSSEASHRFERGVDYASIPEHIELITRLILDICGGQAGPVDDQCVNLPV----REPVRMR 407 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R+ G+ V + +I RLG + D F V+ PS+R D+E + DL+EE+ R+Y Sbjct: 408 LARCHRVLGVAVERAEVAQIFTRLGLPFQEQGDDFVVTPPSYRFDIEIEEDLIEEVARVY 467 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G ++I P P+ + K + + R + V+R++A+R EVVN+SF+ + G Sbjct: 468 GFERIPDVP-PVARA--KMHAQPEARRGAHAVRRLVAARDYQEVVNYSFVEAAWERDYAG 524 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + ++NPI++ +S MR+SL+ GL+ N +R + +FE+ V+ D Sbjct: 525 NDNLVRLVNPIASHLSVMRSSLIAGLVAIVRHNANRKQSRVRLFELGRVFHRDPQLADGP 584 Query: 587 M-AAGIRKGSSGIEGSGRLWSDKSEERC----RFVDLFDAKADALSVIEPFVSLDSLRFE 641 + AG+R+ + +G W EE+ R VD +D K D ++ D+LRF Sbjct: 585 LEVAGVRQ---PLMLAGVAWGGAVEEQWGVPHRQVDFYDVKQDVEALFG--ARADALRFV 639 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGRS I+ + + G+ GE HP L + FE+ +++ Sbjct: 640 ADRYPALHPGRSARIELDGQPI-GWLGELHPQWTQQADLHHAPVVFELDFEAL-----AE 693 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDR-----LIDDVTVFDVFQG 755 + V LS V RDLA VD +PA +++ + + R ++ D VFDV++ Sbjct: 694 RRLPAVRELSRQPAVVRDLALWVDAKLPAQAMLDTVAAAIARDPQLSVVQDAQVFDVWRE 753 Query: 756 KSLGE---GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K + +KS+A + +Q + T + + + RI + +V NA R+ Sbjct: 754 KPVAGQTVTEKSLAFRFWLQDTEVTLDEARVADCIARIKDALVAAHNARQRA 805 >gi|227513516|ref|ZP_03943565.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus buchneri ATCC 11577] gi|227524659|ref|ZP_03954708.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus hilgardii ATCC 8290] gi|227083389|gb|EEI18701.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus buchneri ATCC 11577] gi|227088143|gb|EEI23455.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus hilgardii ATCC 8290] Length = 803 Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 246/826 (29%), Positives = 421/826 (50%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + WLK +L+ D+ + + + + +EV+ VD E L I VLS+ +PD D Sbjct: 1 MKVSYKWLKKYLNLDIPAKDLAEKIERTAVEVDSVDIAEEGLKKLVIGHVLSMTSHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A PGS I N+ + K+RG+ES GM+ Sbjct: 61 HLHVCSVDVGEEEPLQIVCGAPNVDAGQKVIVALPGSRIG-GNVKIKRSKMRGVESEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ E+ S D + I PVG + YL + DPIID+ +TPNR D + + Sbjct: 120 CALDEIGFSKDVVPKEWADGIYVFDDSVPVGEPVYHYLGMDDPIIDLDVTPNRGDMLSIL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNV 229 G +L A + +I P+ E L + ++ D+SL K + + +K V+ Sbjct: 180 GTVHELAAI---YDQHPDIKKPIVHEDSALNVNDEIKASADNSLAKTYKLRVIKDVKIAP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P+W++ L G+R I+ +VD+TNY+ + G P H FD +I + VR A GEKI Sbjct: 237 SPSWLQIILWNAGVRPINNVVDVTNYILMKYGQPLHSFDEDKIDGDIQVRLAQKGEKIKT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +++DLSP+++VIA + ++AG++GG + D+ TT+V++E A++D I I ++ + Sbjct: 297 LDEEDHDLSPEDIVIADNDHPIALAGVMGGYNTQIDEQTTNVVLESAIFDSIRIRKTAQR 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMN 408 + +++ RFERG++ G+ + V+LI L GG A I A + I Sbjct: 357 HVLHSEASQRFERGINPDGVEDAINEAVNLIQELAGGKVAKGIVTASEYHPELPTIFITA 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + G D+ IED I +RLGF + D V++P+ R D+ +ADL EE+ RIYG Sbjct: 417 ARTNHVLGTDLKIEDIKAIFDRLGFISEKQNDGLNVTIPARRWDIHIEADLFEEVARIYG 476 Query: 469 VDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D LP T ++ L+ Q R + VL + + +++S ++E++ LF Sbjct: 477 YDN-----LPATLPTGRQTIGVLTSAQKVQRVARHVLEGLGLTQAISYSLTTEEKAQLFM 531 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT---- 580 + +L ++L+P++ D S +R +LL GLL N + D A++E V+ DT Sbjct: 532 MRESKLTKLLSPMTQDHSTLRMNLLSGLLDDVSYNHAHKVNDVALYETGRVFYKDTDDQV 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 P+ +++A + +G L + VD +D K IE ++ D Sbjct: 592 RPDEVEHVAGVV---------TGNLTDPSWNNHVKSVDFYDLKGIVDQFIENLGINGDIE 642 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + HPGR+ I V G+ G+ HP I F + FE+ L ++ Sbjct: 643 YTSTNKYPEMHPGRTADINIHGHYV-GFIGQVHPKITKQFKIKE-TYAFELNLQTLIDLP 700 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 K + + + S V+RD++F+VD + +VN++K + D+ +FD++ G + Sbjct: 701 KSDDQYQAISKYPS---VERDISFLVDSDVTNDQIVNLMKKRGGAFLHDIRLFDIYDGAN 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +GKKS+A + ++T +D+ + ++I + + + NA +R Sbjct: 758 VPDGKKSMAYSLHYVNPRETLKDEVVTTAFEKIKKRLTDELNAEIR 803 >gi|301059174|ref|ZP_07200114.1| phenylalanine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] gi|300446722|gb|EFK10547.1| phenylalanine--tRNA ligase, beta subunit [delta proteobacterium NaphS2] Length = 805 Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 264/823 (32%), Positives = 427/823 (51%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +L+WLK+H+D ++S E++ LT GLEVE V+ + L I ++L V + + D Sbjct: 1 MKVSLNWLKEHVDIELSPEELSHVLTMAGLEVEGVEAVGQNLDHILISRILEVRPHSNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++DTG +QVVCGAPNV G+L PG+ +P+ + R IRG S GM+ Sbjct: 61 RLSLCQVDTGT-DTVQVVCGAPNVAEGVLAPVILPGAKLPDGTKMKESR-IRGEISKGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 +E EL L++D IM LP DA G L+ L L D I DVS+TPNR DC V GIA ++ Sbjct: 119 LAEDELGLTNDHTGIMILPDDAVPGKTLTSLLPLPDWIFDVSITPNRPDCTSVLGIAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A LK ++ + D + C +A V+ V +P WMR RL Sbjct: 179 AANTGQSLKAFERGVDAKGPAVGSLTSVSVSDPNGCPRYAAAVVRDVSLKPSPFWMRYRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDL 297 G+RSIS LVD++NYV L+ G P H FD R+S+ + VRRA GE LD E L Sbjct: 239 YHSGVRSISNLVDVSNYVMLEVGQPLHAFDYDRLSENRIAVRRAKKGEVFTTLDGVERAL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P+ ++I + ++AGI+GG ++ DNT ++LVE A +DP+ I R K LG+ T++ Sbjct: 299 EPEILLICDGQKPVALAGIMGGLNSEIYDNTRNILVESAFFDPVTIRRGSKGLGLSTEAS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERG D+ G++ L + LI L GG TA + + Y I F + + G Sbjct: 359 YRFERGADIGGVVSALDRALYLIHILAGGVTAKGVVDNYSKPYTAPPIFFRPEKANAILG 418 Query: 417 IDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK- 473 + + L G+ V+ P++R D++ + DLVEE+ R++G D I Sbjct: 419 TAISKSAMKGYFDALEMRTEDDGQQTHLTVTPPTFRVDIKREVDLVEEVARLHGFDNIPV 478 Query: 474 -SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG----GGQ 528 S + ++ + +L L+ V+ +++ E++ +SF+S E G Sbjct: 479 ISPKIRPSEGPESPDLLLRDK----VRAKMSAFGFSEIITYSFVSPESVDSLAENTPGPL 534 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQ 584 ++ +I+NP++ D S +RTSL+PGL++ N+ +A+ FE V+ E+ + Sbjct: 535 KDFTKIMNPLTVDQSVLRTSLIPGLMETARYNILHEMANLRFFEWGKVFFDREDHAQPFE 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 K + AGI G+ + + W D EER VD +DAK L+ + + + RF Sbjct: 595 KILLAGIMVGAHTV----KTWYD--EERP--VDFYDAKG-ILTALLKDLGVVGFRFSREE 645 Query: 645 P-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDS-IPISQKKR 701 S Y S I + +G G P +++ + L N +C FE+ + + + + +KR Sbjct: 646 DLSGYAKDISTAI-YCGDTCVGRVGLASPRLIEAYDLKMNHVCLFEIDVAALLTVLPEKR 704 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T V V RDL+ ++++ + GT+ +II+ L++ V VFD+++G+ + + Sbjct: 705 T----FVPFGRFPSVHRDLSLLLNRSVECGTVTDIIRQEGGELLESVHVFDLYEGERIDQ 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KK+V+ ++ + + T + + L + IV+ + +KT LR Sbjct: 761 SKKAVSFKITFRSNQGTLDGEKVNRLYEAIVKKIGQKTGGTLR 803 >gi|299771524|ref|YP_003733550.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] gi|298701612|gb|ADI92177.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter sp. DR1] Length = 793 Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 261/824 (31%), Positives = 420/824 (50%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT I +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVIGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I+ +I E K + + + VK V A P+WM Sbjct: 178 EIAVINKLQMNEPVINS--VDATIADEKKVVISTEGAPR-YLGRVVKNVNVKAATPDWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 + L G+R+ S LVD+TNYV ++ G P H FD S+I + VR+A EK+ L++QE Sbjct: 235 KALSRSGIRTHSILVDVTNYVLMELGQPMHAFDLSKIEGTVHVRQATQQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDIMVIADDQKALAIAGIMGGLSSSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A I P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKIDLLPKREAIELKQTQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYQVAGEFIADALTRLGCKVTVKAEGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + + +D+ L+ +++ + + E +++SF + Sbjct: 475 QISLPSMDVKFAKYQDRFELA-------ELRQTIVTLGYQEAISFSFADAKLEKQLNPEV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYEN-DTPEGQK 585 + L + NPIS+D++ MR++LL L+ N++R + FE + Y+N + E K Sbjct: 528 QPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFEFGLRFDYQNAKSIEDLK 587 Query: 586 YMA--AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 M A + GS E W K + +D FD K + V+ V + +R E Sbjct: 588 QMPTLALVAVGSQEPES----WHVKPQP----MDFFDFKGEVEEVLAAGRVKAEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 W HPG+S I + + GY G HP++ + LS + LD + Q + Sbjct: 640 ---DWLHPGQSAEILVDGKSI-GYLGRLHPSLENELDLS---TTWVAELDQTAVLQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 LS V+RD+A ++ +I + +I+ L+D +FDV+ G+ + +G Sbjct: 690 YVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEQTGGELLDSTWLFDVYTGQGVEDG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|268316187|ref|YP_003289906.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodothermus marinus DSM 4252] gi|262333721|gb|ACY47518.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodothermus marinus DSM 4252] Length = 825 Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 264/839 (31%), Positives = 421/839 (50%), Gaps = 51/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + WL+ ++D D+S ++ + L +GLEVE+V+ L I +VL V +P+ D Sbjct: 1 MKLSYRWLQQYIDLDLSPSELAEALIGLGLEVEEVEPLGTDLKGVVIGRVLEVRPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-----PENNMIVNVRK--IRG 111 + R+D G + + +VCGAPNV G A PG+ + N V +RK IRG Sbjct: 61 RLTLCRVDLGSGEPVPIVCGAPNVAAGQKVAVATPGTTLLLTDREGNRQPVTIRKTKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLE-----LSDPIIDVSLTPNRS 166 S GM+C+E EL LSDD + I+ LP DAPVG +YL+ + D ++VSLTPNR+ Sbjct: 121 EVSEGMICAEDELGLSDDHSGILVLPGDAPVGHPFVEYLQQQGLTVPDYRLEVSLTPNRA 180 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 D G+A DL A L+ ++ P +++ +D C + V+ VR Sbjct: 181 DAASHIGMARDLSALLDRPLRRPEVAVPEPGGEAARQVQVTIDAPEACPRYVALLVRNVR 240 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR-ISDVLTVRRACSGE 285 +P W+RQRL A+GLRSI+ +VD+TNYV + G P H FD + I + VR A +GE Sbjct: 241 IGPSPLWLRQRLAAIGLRSINNVVDVTNYVLHECGQPLHAFDFDQLIGGRIHVRLARAGE 300 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD + L ++I R ++AGI+GG+++ D TT++L+E A +DP I R Sbjct: 301 QFTTLDGKTRQLPEGALLICDAERPVALAGIMGGENSEVTDTTTNILIESAYFDPSTIRR 360 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKI 404 + K LG+ TDS YRFERGVD LI+ + GG + + +++PR + Sbjct: 361 TSKALGLQTDSSYRFERGVDAGLQRWAAARAAQLIVEVAGGEIVPGVVDVQVRSFEPRTV 420 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G ++P + RIL+RLGF+ E + F +VP +R DV E+ DL+EE+ Sbjct: 421 TLRLPRLAHVLGTEIPSGEVRRILDRLGFAPKPEGEAFRCTVPLYRPDVHEEIDLIEEVA 480 Query: 465 RIYGVDQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 R++G D++ P+P R + Q+ R V+ +LA + E+ S + +E Sbjct: 481 RVHGYDRL---PMPEAFTVPARVPDEPPAQALRRRVRTLLAGFGLREIYTNSLLPREVVR 537 Query: 520 QSVLFGGGQRE------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + V G + +E LNPISA+M+ +R SLLPGL++ N +R FE Sbjct: 538 RFVPASGSDHQTDAPHLVETLNPISAEMAVLRPSLLPGLVQTIVYNQNRGQQVLRFFEFG 597 Query: 574 HVYEN----DTPEGQKYMAAGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDAKADALSV 628 V+ DTP G + + + G SG + + + R D FD K ++ Sbjct: 598 RVFARTDRPDTP------VPGFAEHEALVIGLSGPHAPEGWDVQPRLTDFFDLKGLIETL 651 Query: 629 IEPFVSLDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 ++ D + ES P+ + + ++ VLG + + + L P+ Sbjct: 652 LDTLHLSDRMALVPAESPEPTVAY--QMNLVADGR--VLGTLARLSDALQEAYELRAPLY 707 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 E+ D+ + ++ S V RDLA +VD+ P G L+ I+ L+ Sbjct: 708 YAELNWDAF-AEIAHPAQQRRYRPFSRFPEVDRDLAVLVDRDQPVGPLLETIREAGGELL 766 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V VFD+++G+ + GKKSVA + + T D+++ ++ IV + ++ A LR Sbjct: 767 RHVGVFDLYEGERIPSGKKSVAFSLRFGADR-TLTDEEVDARLEAIVRELERRFGAQLR 824 >gi|319763192|ref|YP_004127129.1| phenylalanyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] gi|317117753|gb|ADV00242.1| phenylalanyl-tRNA synthetase, beta subunit [Alicycliphilus denitrificans BC] Length = 814 Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 250/841 (29%), Positives = 420/841 (49%), Gaps = 65/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE++ + PF + ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLTTQELADTLTMAGLEVEEL--QPVAPPFRRIVVGEIKEAAQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN R G ++G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQPELLNIVCGAPNARAGIRVPCAMVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ELP DAP+G + +YL+L D + + LTPN + C+ Sbjct: 117 GVESHGMLCSARELKLSEDHGGLLELPADAPLGQDIREYLKLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A ++ A LK + P ++ +I + + LC F+ V+GV Sbjct: 177 VYGVAREVSALTGAPLKALQF--PEAAAAIDDRLPVRVSAPDLCGRFSGRVVRGVNPRAQ 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS++ LVDI+NYV + G PSH+FD +I L VR +GE++ Sbjct: 235 TPQWMVDRLARCGQRSVAPLVDISNYVMFEFGRPSHIFDLDKIHGGLDVRWGRAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T +V VE A W P +A + Sbjct: 295 LNGNTITVDEKVGVIADEREVESLAGIMGGDATAVSDDTRNVYVEAAFWWPEAVAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--RNITYKPRKIVFM 407 TD+ +RFERGVD + + ++ I LI+ +CG + + + + + V M Sbjct: 355 YNFATDAGHRFERGVDPELTVEHIERITQLIVEICGTPETTLGPIDDQRVNMPAQNAVRM 414 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + ++ G+ + L RLG SV E V PS+R D+ + DL+EE+ R+ Sbjct: 415 RVARAAKVIGMPLTQAQCADALRRLGLSVREEEGAVTVLPPSFRFDLRLEEDLIEEVARV 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 G + + + P PL + K L + R+ + V+R LA+ E +N+SF+ + Sbjct: 475 VGYNNLPTNP-PLAPITPK--LRAESRRSSFAVRRELAALGYQETINFSFVEERWETELA 531 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND------ 579 G + +LNPI++ +S MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 532 GNAAPIRLLNPIASQLSVMRSSLLGSLLQVLKFNLDRKAGRVRVFELGRVFLRDAGVQGS 591 Query: 580 --TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + EG Q AG+ G++ GR DK+ VD +DAK D +++ P Sbjct: 592 DSSVEGYAQPMRVAGLAHGAADALQWGR--KDKA------VDFYDAKGDVEALLAPLRPT 643 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 FE HPGR + + + G+ GE HP + L FE+ LD+ Sbjct: 644 ----FEPATHPALHPGRCARVLLDGKAI-GFVGELHPQWRQSWELPAAPVMFELELDA-- 696 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVF 753 + Q+K + V + V+RD+A +V + + ++ I L+ +FDVF Sbjct: 697 VLQRKVPAFRAV---AKRQFVERDIAVVVAERVTHDEVMGAIAAALPGELLRSAVLFDVF 753 Query: 754 QGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 + + +L +G+KS+A+++ + D +I + +++ + ++T A L Sbjct: 754 RPQPPRAGESAPAGALAQGEKSLAMRLTLGSDSAALTDTEIDAAVQTVLQALAQQTGARL 813 Query: 803 R 803 R Sbjct: 814 R 814 >gi|220931408|ref|YP_002508316.1| phenylalanyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] gi|219992718|gb|ACL69321.1| phenylalanyl-tRNA synthetase, beta subunit [Halothermothrix orenii H 168] Length = 799 Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 252/830 (30%), Positives = 438/830 (52%), Gaps = 60/830 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ ++WLK ++D S +++ D LT +GLEVE ++ E L + ++ V+ +P+ D Sbjct: 1 MRVPVNWLKSYIDFQYSPQELADKLTMLGLEVEGIEYMGEGLEGIIVGEIKKVKPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +DTG+ + +Q++ GAPNV+ G+ AP G +P I R +RG S GM+ Sbjct: 61 KLVICEVDTGQ-ELLQIITGAPNVKEGIKVPVAPVGVTLPGGLKIKKAR-LRGENSYGMI 118 Query: 119 CSEKELMLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL LS+ AS IM L DA VG + DYL L + ++ + LTPN + C+G+ GIA + Sbjct: 119 CSIDELGLSEKRASGIMILDEDAEVGTDIIDYLHLDEYVLKLDLTPNYARCLGLLGIARE 178 Query: 178 LVAAGLGKLKEINISCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + + ++K+ + S SESI I +++D LC + +K ++ +P WM+ Sbjct: 179 IKSVLGNEIKKPDTDLVESESESIENYISIEVEDKDLCPRYTGRVIKNIKIGPSPRWMQA 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A G+R I+ +VDITNYV L+ P H FD +I + VRR EK++ LDN+E + Sbjct: 239 RLRAAGIRPINNIVDITNYVMLEYNQPLHAFDYDKIDKKIIVRRGKEQEKLITLDNKERE 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L + +VIA + +AG++GG ++ D+TT V +E A ++P+NI ++ K + +++ Sbjct: 299 LDEEVLVIADTEKALGLAGVMGGANSEVCDDTTTVFLESAYFNPVNIRKTAKKFALPSEA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT---YKPRKIVFMNSE--- 410 +RFER VD++G+I L+ GG I R I +PR++ +N + Sbjct: 359 SHRFEREVDIEGVIAASNRAAYLMQKYAGGE-----IVRGIVDVYPEPRRLHAINLDTGY 413 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGV 469 V ++ G+++ + +L RL F V K +V VPS+R D+E +ADL+EE+ R+YG Sbjct: 414 VNKILGLNLDKTEIEDMLTRLEFKVEERDSKSLKVMVPSFRSDIEREADLIEEVARMYGY 473 Query: 470 DQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISK--------- 518 + I P+T+ E K+ + +Q + +++ + EV+ +S K Sbjct: 474 NNI-----PVTRPESKQRGRKTYKQHLEDITRNYMSAMGLDEVITFSLTGKKVYDDLDIP 528 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + +++ NP++ +S +RTSLLP +++ N R + +++E+ ++ Sbjct: 529 EDSSL----RNWVKVKNPLNEALSILRTSLLPSIIEVLSNNAKRQVETMSVYELGKIFTR 584 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 E PE + +A G + +G D F K + + + Sbjct: 585 IKEKKRPEERVVLAGGCMGKTDDPWKTGA------------PDFFYLKGVVVDYLRE-LG 631 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 LD L F + HPGR+ I + +G GE P+I D F L + F++ ++I Sbjct: 632 LDGLDFTPSKLPFLHPGRTAEIYYR-DTRIGIMGELMPDIADRFNLRSGTAVFQLDFETI 690 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF 753 ++ ++ L V+RD+A +V+ + AG+L+ +I+ N +L+ +FD++ Sbjct: 691 ---VEEADLDRQYEQLPRYPAVERDMAVVVENEVFAGSLLKLIRENGGKLLKKAGLFDLY 747 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 QGK + EG KS+A +++ Q T DD++ + + I++ + K A +R Sbjct: 748 QGKQIPEGYKSLAFKLVFQAHDRTLTDDEVNEVFNSIMDQLKDKFGAEIR 797 >gi|297544941|ref|YP_003677243.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842716|gb|ADH61232.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 794 Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 253/822 (30%), Positives = 426/822 (51%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MLVSLLWLKEFVDIDEDAKIISEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMC Sbjct: 61 KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S KEL L + I LP P+G +++ L+L D +++ +TPNR DC+ + G Sbjct: 120 SAKELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A K K I S E P ++ + D LC + VK V+ +P W Sbjct: 179 IAREVAATFKKKFKMPMIEVKESEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD Sbjct: 237 MQIRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAKEGEKLVTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L +VIA + + +AG++GG++ D T ++L+E A + NI + K LG+ Sbjct: 297 KERILDSSMLVIADEKKAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +++ RFE+G+D + + + L+ CGGT + + ++ +N + Sbjct: 357 RSEASSRFEKGLDPEVTVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G ++P + ILE L F VI + + EV+VP +R+DV +AD+ EEI R+YG + Sbjct: 417 NRFLGTELPTSQMIEILESLEFKVIEKGNDLEVTVPHFRRDVTMEADIAEEIARLYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGG 526 I+ + + L+ +Q + VL + + E+V SF+ K L Sbjct: 477 IEDSLMKNAET-TLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSP 535 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQK 585 ++ ++I+NP+ + S MRT+LLP +L N R + +F +FE+S V+ + P K Sbjct: 536 LRKAVKIINPLGEEQSLMRTTLLPFILNVAYTNYSRKVQEFKVFEISKVFIPKELP--LK 593 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS---LDSLRFES 642 + I+ + G+ G VD F K +IE F+ + + + Sbjct: 594 ELPQEIKTVAIGMYGEN-------------VDFFALKG----IIEAFLEVMGIKGIEYVR 636 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 YHPGRS I E LG FGE HP++L+ + + + E+ LD + + Sbjct: 637 AEDPSYHPGRSSKILLGDE-TLGIFGEIHPDVLENYDIPVRVYAGEINLDKV---IQYSN 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 K+ + L V+RD+A +VD+ I + +I + +L+D V +FDV++G ++ EG Sbjct: 693 VEKRYIPLPKYPAVERDIAVLVDEDIFVKDVEKVILETGGKLVDKVELFDVYKGPNIPEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVA + + + T D+++ ++ + IVE + KK A LR Sbjct: 753 KKSVAFSIWYRSYERTLTDEEVSVIHNNIVEALDKKLGAKLR 794 >gi|302391190|ref|YP_003827010.1| phenylalanyl-tRNA synthetase, beta subunit [Acetohalobium arabaticum DSM 5501] gi|302203267|gb|ADL11945.1| phenylalanyl-tRNA synthetase, beta subunit [Acetohalobium arabaticum DSM 5501] Length = 799 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 269/827 (32%), Positives = 438/827 (52%), Gaps = 51/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK + +WL+D++D D + E++ LT GLEV+ ++ + E L I ++L V + + D Sbjct: 1 MKVSYNWLQDYIDFDYTPEELASKLTMAGLEVDGIEYQAEGLEDIIIGEILEVNDHENAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +E ++VCGAPNV VG AP G+ +P M + +IRG++S GM+ Sbjct: 61 KLSLCLVDLGDIKE-EIVCGAPNVEVGAKSPVAPVGTKLP-TGMEIKEAEIRGVKSRGML 118 Query: 119 CSEKELMLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L ++ A IM L VG ++ L L D I ++ LTPN +DC+ + G+A + Sbjct: 119 CSSDELGLQEERADGIMILDSGLEVGSNFTEALGLDDVIFELDLTPNYADCLSMIGVARE 178 Query: 178 LVAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + +L+ EI P +E +++ +D LC + +K V +P W Sbjct: 179 VAVMTGNELQLPEAEIAEKGPEVTELTSIQV----EDEELCPRYTARVIKDVEVKESPLW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT-----VRRACSGEKIL 288 ++QRLKAVG+R I+ +VDITNYV ++ G P H FD DVLT VRRA GEK++ Sbjct: 235 LQQRLKAVGIRPINNIVDITNYVLMEFGQPLHAFD----YDVLTENRIVVRRAEDGEKMV 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E +L D +VIA IAG++GG + + TTDVL+E A + P +I ++ K Sbjct: 291 TLDEEERELDDDMLVIADAKEPVCIAGVMGGSDSEVTEETTDVLLEAANFSPASIRQTAK 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ ++S +RFERGVD+ G + V LIL L GG + I + KP ++ Sbjct: 351 KLGLHSESSHRFERGVDINGTDLASRRAVELILDLAGGEVAQGAIDKYPDPVKPLELELK 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V L G ++ E + IL +L F VI + K +V VP++R DV ADL+EEI RIY Sbjct: 411 VERVNNLLGTELTKEQIIEILVKLEFEVIDQGSKLKVKVPTFRGDVSRGADLIEEIARIY 470 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----SVL 523 G +++++ + ++ KR + QQS + L + EV +SF S++ ++ Sbjct: 471 GYNEVEATISSGSILQGKR--TQQQSIKKKTLDTLTGLGLYEVSTFSFTSQQVFDRINLP 528 Query: 524 FGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 RE +++ NP+S++ +RT+L+P LL+ N+++ I + IFE+ V+ TP+ Sbjct: 529 ADSKLRETVKLANPLSSEHEILRTTLIPNLLEVLAENINQNIEEVEIFELGRVF---TPQ 585 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE- 641 +K + R+ SG K EE +D + + E F +L+ +E Sbjct: 586 EEKELPKE-RELLSGA------LMQKEEEDIWNLDAANFFTLKGKLEEYFAALNITDYEF 638 Query: 642 -SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 S + +HPGR+ I+ E G GE HP+I++ + L FE+ + I Sbjct: 639 ISSQAATFHPGRTAEIRI-GEKKAGIIGELHPDIVEEYELVPRTVLFELKFEVIV----- 692 Query: 701 RTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + +VV+ L RD+A +VDQ + A + II+ V L++ + +FD++QG+ Sbjct: 693 EAASDEVVYTELPKYPASTRDIALVVDQKVTANEIEEIIRKVAGELLEKIELFDLYQGEQ 752 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 L G KS+A + + + T D+++ L I + ++ A +R Sbjct: 753 LKAGTKSLAYSLTYRAVDRTLTDNEVNKLQSEIESELNQEVGAEIRQ 799 >gi|319779415|ref|YP_004130328.1| Phenylalanyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] gi|317109439|gb|ADU92185.1| Phenylalanyl-tRNA synthetase beta chain [Taylorella equigenitalis MCE9] Length = 809 Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 262/831 (31%), Positives = 440/831 (52%), Gaps = 60/831 (7%) Query: 6 SWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAIL 63 SWL++ ++ VS E++ ++LT GLEVE + S + +++S+ ++P+ D I Sbjct: 6 SWLREFVNPPVSTEELAESLTMAGLEVESIQKVAPEFSGVVVAEIVSIVQHPNADKLRIC 65 Query: 64 RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKE 123 ++D GK + IQ+VCGAPN + G+ A G+ +P + ++ K+RG ES GM+CS KE Sbjct: 66 QVDYGKGETIQIVCGAPNAKEGIKVPLATIGAVLP-GDFKISKSKLRGEESFGMLCSAKE 124 Query: 124 LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGL 183 L +S D++ ++ L + G + + L L D + ++ LTPNR+DC+ V G+A ++ A Sbjct: 125 LGISADASGLLVLDENLRTGTDIREALNLDDVVYEIKLTPNRADCLSVYGVAREVSALFK 184 Query: 184 GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVG 242 L++ + S +++ + K ++ S LC F + GV + P WM RL+ G Sbjct: 185 LPLEQNSTSESIATNTNIKVPKVNIKSSDLCGRFTARVITGVDAKCSTPKWMVDRLERSG 244 Query: 243 LRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV 302 RS+S LVDI+NYV L+ G P+H+FD +I LTV G+K+ L+ + +LS D Sbjct: 245 QRSVSVLVDISNYVMLELGRPTHIFDLDKIHGDLTVSWGAEGQKLKLLNETDVELSSDLG 304 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 VI SD + +AGI+GG D NT ++ +E A W P IA + L I +++ +RFER Sbjct: 305 VIYSDAGPECLAGIMGGHQTAVDLNTKNIFIEAAFWYPDAIAGRARKLKIPSEASHRFER 364 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPI 421 GVD Q I + +I LI+ +CGG AS+I + + +K V M S +++ G+ V Sbjct: 365 GVDYQSNIEHINYITKLIIDICGGEASEID-DQKVNLPAQKTVDMRLSRCQKVLGVPVTS 423 Query: 422 EDSLRILERLGFSVIGEYD--------KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI- 472 + + LGF E+D F+V PS+R D+E + DL+EE+ RIYG D I Sbjct: 424 TQVEEVFKGLGF----EFDISDSEADTTFKVVSPSYRFDIEIEEDLIEEVARIYGYDNIP 479 Query: 473 ----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 KSE + LS + + ++ ++ + EVVN+SF+ + F Sbjct: 480 ALSPKSEAV-------MHFLSESKFDSHQIRELMVTEGFQEVVNYSFVDAKWEEDFLKNP 532 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYM 587 +++LNPI++++S MR+SL+ L+ N R + +FE++ V+ +D + ++ Sbjct: 533 NPVKLLNPIASNLSVMRSSLILSLVNNIVYNSKRKQSSIKLFEIARVFAHDEVVQDSEFE 592 Query: 588 AAGIRKGSSGIEGSGRLWS----DKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFES 642 GI S ++ +G +W + + R VD FD K V+E VS + L+F+S Sbjct: 593 VKGI---SQCLKLAGAVWGLALPTQWGIKTRPVDFFDLK----KVVENIVSDYEELKFKS 645 Query: 643 GAPSW----YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + + HPGRS I + +G+ GE HP + F L++ FE+ L+++ Sbjct: 646 YSSDYAHVALHPGRSASIFYKG-LEVGFIGELHPKLTQIFSLNSSPIVFEIDLEAVKERS 704 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV------FDV 752 +TK+ LS +RDLA + ++ + + + + L D+++V FDV Sbjct: 705 LPKTKS-----LSKQQISERDLAIWIASNLEYAQVADHLSALVNLDDELSVIRNFYLFDV 759 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + E +KS+AI+ + Q + + D + MD+I+ N+ K NA LR Sbjct: 760 WTDEQNPE-EKSIAIKFIFQGNESSLEDAQVESAMDKILSNLTSKFNARLR 809 >gi|124267072|ref|YP_001021076.1| phenylalanyl-tRNA synthetase subunit beta [Methylibium petroleiphilum PM1] gi|124259847|gb|ABM94841.1| phenylalanyl-tRNA synthetase beta subunit [Methylibium petroleiphilum PM1] Length = 806 Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 259/828 (31%), Positives = 407/828 (49%), Gaps = 46/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 M+F SWL++ + +S + +TLT GLEVE++ R PF + +VL++E++P+ Sbjct: 1 MQFPESWLREFCNPPLSTPALAETLTMAGLEVEEL--RPVAPPFDKVVVAEVLAIEKHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D I R+D G + +VCGAPNVR G L+G PP I + K+R Sbjct: 59 ADRLHICRVDVGAGTPLSIVCGAPNVRAGIKVPCALVGAELPPAEAGGAPFQI-KLGKLR 117 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ L DAPVG + +L+L D + + LTPN + C+ Sbjct: 118 GVESQGMLCSARELKLSEDHGGLLILADDAPVGTSIRSHLQLDDTLFTLKLTPNLAHCLS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V GIA ++ A LK+ + L + L ++ + LC F+ V GV A Sbjct: 178 VYGIAREVSALTGVPLKQPAFAPVLPTHGAKLPVRVAAPE--LCGRFSGRIVHGVNPRAA 235 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM +RL G RS+SALVDI+NYV + G PSH+FD +I L VR SGE + Sbjct: 236 TPPWMVERLARCGQRSVSALVDISNYVMFEFGRPSHIFDLDKIHGGLEVRWGRSGESLEL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ ++ VIA D +++S+AGI+GG+ D+T +V VE A W P +IA + Sbjct: 296 LNGSTIEVDAAVGVIADDRQVESLAGIMGGQATAVTDDTRNVYVEAAFWWPQSIAGRSRR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFM 407 TD+ +RFERGVD + ++ I LIL +CGG A + I P + + Sbjct: 356 YNFSTDAGHRFERGVDPAQTVEHIERITQLILDVCGGEAGP--MDDQILALPERTPVAMR 413 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 R+ G+ V + + +RLG + E + V+ PSWR D++ + DL+EE++R+ Sbjct: 414 VDRACRVIGMPVSQSQCVGVFQRLGLACREEDGRIIVTPPSWRFDLQIEEDLIEEVIRVL 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G + P PL V R +S + ++ +A E VN+SF+ F G Sbjct: 474 GYSMLPDTP-PLAPV-TPRVMSESRRGLHTLRHAMAGLDYQETVNFSFVEARWERDFAGN 531 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-----DTPE 582 + + +LNPI+A ++ MR+SL+ L+ N+ R A +FE+ V+ D+ Sbjct: 532 EAPIRLLNPIAAPLAVMRSSLIGSLINVLRFNLARKAARVRVFEIGRVFLRDPAAVDSDS 591 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G + +R G G +E R VD FD K D +++ P RF + Sbjct: 592 GVAGVDQPLRLGGLAYGGCDEPQWGTTE---RGVDFFDVKGDVEALLVP----RRPRFVA 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGRS I+ V G+ GE HP + L FE LD+ +S+ Sbjct: 645 AEHPALHPGRSARIECDGRTV-GWIGELHPRWRQAYELPQAPVVFE--LDAQALSEG--- 698 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVFDVFQGKS--- 757 + RD+A IV H+ L+ I ++ +FDV++ K+ Sbjct: 699 GVPIYTAIPKQQAAVRDIALIVGDHVAHDALMQSISVAPSSGVVRSARLFDVYRPKNPSA 758 Query: 758 -LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + G++S+AI++ + T D+ I + +++ + + A LR+ Sbjct: 759 EVAAGERSLAIRLELLDEHGTLTDERIDAAVRSVLDTLSAQLGARLRA 806 >gi|325124571|gb|ADY84094.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter calcoaceticus PHEA-2] Length = 793 Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 254/824 (30%), Positives = 417/824 (50%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + E + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSETLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPTDAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E +I +I E K + + + +K V A P WM Sbjct: 178 EIAVINQLQMNEPDIKS--VDATIADEKKVVISTEGAPR-YLGRVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDIMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKTEILPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + + L RLG V + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYQLTADFIADALTRLGCEVTVKAEGEWNVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------ELRQTIVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 NPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQDAKSIQDLK 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 Q A + GS E W K + +D FD K + ++ V ++ +R E Sbjct: 588 QIPTLALVAVGSQQPES----WHVKPQP----MDFFDFKGEIEEILAAGRVKVEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +W HPG+S I + + GY G HP++ + LS + LD + Q + Sbjct: 640 ---AWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQTAVLQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 LS ++RD+A ++ +I + +I K L+D +FDV+ G+ + EG Sbjct: 690 YVSNFTELSRFPSIRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQGVEEG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|330825386|ref|YP_004388689.1| Phenylalanyl-tRNA synthetase beta chain [Alicycliphilus denitrificans K601] gi|329310758|gb|AEB85173.1| Phenylalanyl-tRNA synthetase beta chain [Alicycliphilus denitrificans K601] Length = 814 Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 254/844 (30%), Positives = 420/844 (49%), Gaps = 71/844 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE++ + PF + ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLTTQELADTLTMAGLEVEEL--QPVAPPFRRIVVGEIKEAAQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN R G ++G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQPELLNIVCGAPNARAGIRVPCAMVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ELP DAP+G + +YL+L D + + LTPN + C+ Sbjct: 117 GVESHGMLCSARELKLSEDHGGLLELPADAPLGQDIREYLKLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A ++ A LK + P ++ +I + + LC F+ V+GV Sbjct: 177 VYGVAREVSALTGAPLKALQF--PEAAAAIDDRLPVRVSAPDLCGRFSGRVVRGVNPRAQ 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P W+ RL G RS++ LVDI+NYV + G PSH+FD +I L VR +GE++ Sbjct: 235 TPQWIVDRLARCGQRSVAPLVDISNYVMFEFGRPSHIFDLDKIHGGLDVRWGRAGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T +V VE A W P +A + Sbjct: 295 LNGNTITVDEKVGVIADEREVESLAGIMGGDATAVSDDTRNVYVEAAFWWPEAVAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG------GTASDICIARNITYKPRK 403 TD+ +RFERGVD + + ++ I LI+ +CG G D + R Sbjct: 355 YNFATDAGHRFERGVDPELTVEHIERITQLIVEICGTPETALGPIDDQRVNMPAQNAVRM 414 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 V ++V + V D+LR RLG SV E V PS+R D+ + DL+EE+ Sbjct: 415 RVARAAKVIGMPLTQVQCADALR---RLGLSVREEEGAVTVLPPSFRFDLRLEEDLIEEV 471 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSV 522 R+ G + + + P PL + K L + R+ + V+R LA+ E +N+SF+ + Sbjct: 472 ARVVGYNNLPTNP-PLAPITPK--LRAESRRSSFAVRRELAALGYQETINFSFVEERWET 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--- 579 G + +LNPI++ +S MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 529 ELAGNAAPIRLLNPIASQLSVMRSSLLGSLLQVLKFNLDRKAGRVRVFELGRVFLRDAGV 588 Query: 580 -----TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + EG Q AG+ G++ GR DK+ VD +DAK D +++ P Sbjct: 589 QGSDSSVEGYAQPMRVAGLAHGAADALQWGR--KDKA------VDFYDAKGDVEALLAPL 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 FE HPGR + + + G+ GE HP + L FE+ LD Sbjct: 641 RPT----FEPATHPALHPGRCARVLLDGKAI-GFVGELHPQWRQSWELPAAPVMFELELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVF 750 + + Q+K + V + V+RD+A +V + + ++ I L+ +F Sbjct: 696 A--VLQRKVPAFRAV---AKRQFVERDIAVVVAERVTHDEVMGAIAAALPGELLRSAVLF 750 Query: 751 DVFQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 DVF+ + +L +G+KS+A+++ + D +I + +++ + ++T Sbjct: 751 DVFRPQPPRAGESAPAGALAQGEKSLAMRLTLGSDSAALTDTEIDAAVQTVLQALAQQTG 810 Query: 800 AVLR 803 A LR Sbjct: 811 ARLR 814 >gi|251795415|ref|YP_003010146.1| phenylalanyl-tRNA synthetase subunit beta [Paenibacillus sp. JDR-2] gi|247543041|gb|ACT00060.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus sp. JDR-2] Length = 815 Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 253/841 (30%), Positives = 438/841 (52%), Gaps = 65/841 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL ++D T + E++ + +T G+E++ V++ + +S + V S E++PD Sbjct: 1 MKVSYQWLNKYIDLTGYTAEELAEKMTRGGIEIDSVESLNKGVSGVVVGYVKSREKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ +ID G +E+Q+VCGA NV G A G+ +P + + K+RG+ES GM Sbjct: 61 DKLSVCKIDVGTGEELQIVCGAKNVDAGQKVPVAMIGAKLP-GDFAIKRAKLRGVESQGM 119 Query: 118 MCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP PVG + + L ++D ++++ LTPNRSDC+ + Sbjct: 120 ICSAKELGINDKLLPKEQQEGILVLPESTPVGTPIGEVLGINDEVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A ++ G +E+ I P +++ I + C ++ +KGV+ Sbjct: 180 LGVAHEI---GALTGREVRIPEPAVNHAADRADSHIAVSISAPEQCSHYSARYIKGVKIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ RL A G+R IS +VD+TN+V L+ G P H FDA I+ + VR A GEKI Sbjct: 237 PSPQWLQNRLIAAGVRPISNVVDVTNFVMLEYGQPLHAFDADAITTGRIDVRLAKQGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE L P +VI + ++AG++GG + +D T ++L+E A +D + ++ Sbjct: 297 VTLDDQERTLEPQMLVITDGEKPVALAGVMGGASSEVNDKTVNILLESAKFDGGTVRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-- 405 + LG+ ++S RFE+ VD +IP L +LI L G ++ + +T +V Sbjct: 357 RQLGLRSESSIRFEKEVDPARVIPALNRAAALIAELADGLVAEGIVEAVVTKTEPAVVEV 416 Query: 406 -------FMNSEVKRLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEK 456 ++ +E+ RL + I +RL FS + D+F V+VP+ R D+ Sbjct: 417 TLDKINGYLGTELSRL--------EVQTIFDRLHFSYRLSDANDQFAVTVPTRRGDITRD 468 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EE+ R++G D I + P+ L+ Q+ R ++R L + EV+++SF Sbjct: 469 VDLIEEVARLFGYDNIPTTPIHGDVTPG--GLTKPQTIRRELRRRLTDAGLYEVISYSFT 526 Query: 517 SKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 ++ LF G + +++ P+S D S +RT+L+ L++ N +R AIFE+ Sbjct: 527 GPSRTELFPELTGKDLKAVKLAMPMSEDRSVLRTTLIAQLIETATYNRNRKNESSAIFEI 586 Query: 573 SHVYENDT------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 V+ + PE ++ +A + + W+ K+E VD +DAK Sbjct: 587 GSVFHTEEEQLTRLPEEKQRLAVLLTGNRVDAQ-----WNRKAEP----VDFYDAKGVLE 637 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSG--IIKTS-AEIVLGYFGEFHPNILDFFGLSNP 683 +VI+ +R+ES P+ +HPGR+ I+ T+ +GY G+ HP + L++ Sbjct: 638 TVIDVLGLTSKVRYESAQPANFHPGRTAAVIVDTAHGPETIGYVGQLHPTLQHESDLADT 697 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR 742 EV L ++ + K + ++ +RD+A +++Q +PA L I V Sbjct: 698 YV-VEVELGTLYGLADTAIEYKVLPRYPAM---QRDIAVVLEQAVPAAKLTAIAWAVAGE 753 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L++ V VFDVF G+ LG GKKSVA+ ++ + T D+++ L ++V + + A L Sbjct: 754 LLESVRVFDVFTGEKLGAGKKSVALSLVYRHADRTLTDEEVTELHGKVVAELEQSFAAEL 813 Query: 803 R 803 R Sbjct: 814 R 814 >gi|167040672|ref|YP_001663657.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter sp. X514] gi|300914713|ref|ZP_07132029.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter sp. X561] gi|307724053|ref|YP_003903804.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter sp. X513] gi|166854912|gb|ABY93321.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter sp. X514] gi|300889648|gb|EFK84794.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter sp. X561] gi|307581114|gb|ADN54513.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter sp. X513] Length = 794 Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 256/821 (31%), Positives = 427/821 (52%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MLVSLLWLKEFVDIDEDAKAIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ I +++Q+V GA N++VG A G+ +P + + K+RGIES GMMC Sbjct: 61 KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKRGKLRGIESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ + G Sbjct: 120 SAEELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A K K + S E P ++ + D LC + VK V+ +P W Sbjct: 179 IAREVAATFKKKFKMPVVEVNESEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD Sbjct: 237 MQMRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L +VIA + +AG++GG++ D T ++L+E A + NI + K LG+ Sbjct: 297 KERILDSSMLVIADEKEAIGLAGVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +++ RFE+G+D + + + L+ CGGT + + ++ +N + Sbjct: 357 RSEASSRFEKGLDPEITVLACERAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R G D+P + ILE L F V+ + D EV+VP +R+DV +AD+ EEI R++G + Sbjct: 417 NRFLGTDLPTSQMIEILESLEFKVVQKGDDLEVTVPHFRRDVTIEADIAEEIARLFGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGG 526 I+ + Q L+ +Q + VL + + E+V SF+ K L Sbjct: 477 IEDSLMKNAQT-TLGALTKEQRLEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSP 535 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQK 585 ++ ++I+NP+ D S MRT+LLP +L N R + DF +FE+S ++ + P K Sbjct: 536 LRKAVKIINPLGEDQSLMRTTLLPFILNVAYTNYSRKVQDFKVFEISKIFMPKELP--LK 593 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESG 643 + I+ + G+ G + VD + K +AL + ++ +R E Sbjct: 594 ELPQEIKTIAIGMYG-------------KDVDFYSLKGVIEALFEVMGIKGVEYVRAED- 639 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 PS YHPGRS I E LG FGE HP++L+ + + + G E+ LD + + Sbjct: 640 -PS-YHPGRSAKILLGDE-TLGIFGEIHPDVLENYDIPVRVYGGEINLDKV---IQYANV 693 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + L V+RD+A +VD I + +I + +LID V +FDV++G ++ EGK Sbjct: 694 ENRYMPLPKYPAVERDIAVLVDGDIFVKAVEKVILETGGKLIDKVELFDVYKGPNIPEGK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVA + + T D+++ ++ + IVE + KK A LR Sbjct: 754 KSVAFSIWYRSYGRTLTDEEVNVIHNNIVEALDKKLGAKLR 794 >gi|254468780|ref|ZP_05082186.1| phenylalanyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] gi|207087590|gb|EDZ64873.1| phenylalanyl-tRNA synthetase, beta subunit [beta proteobacterium KB13] Length = 785 Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 242/821 (29%), Positives = 440/821 (53%), Gaps = 55/821 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKF+ +WL ++L ++ D LT GLE+E + N E+L + +++S+E++PD D Sbjct: 1 MKFSYAWLNQLFANKLNLNELADDLTMAGLEIESIHNPGESLQNIVVGEIVSIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +++Q+VCGAPN R G+ A G+ PE + K+RG+ES GM Sbjct: 61 RLNVCQVDVGS-EKLQIVCGAPNARAGIKVPCALIGTKFPE--FTIKKSKLRGVESFGMC 117 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KE+ LS+++ +MEL +D G ++ L L+D +I+VSLTPNR+DC+ + GIA ++ Sbjct: 118 CSAKEIGLSEEADGLMELSLDLTNGEPVAKALNLNDSVIEVSLTPNRADCLSILGIAREV 177 Query: 179 -----VAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA- 230 +A + K+ +I S C ++ I ++ C ++ + + N+ Sbjct: 178 RSIKGLAFDMPKINQITSSDKCKITPNVI---------NTESCPVYSYASISQIDNSAQL 228 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P+ + RL + ++SI+ +VD+ NYV L+ G P H FD ++I + VR A EK+ L Sbjct: 229 PDEIIHRLDSADIKSINTVVDLVNYVMLETGQPMHAFDMNKIKGNIVVRNASKQEKMTLL 288 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 ++Q ++ +++VIA D ++AG++GG + + NTT++ +E A + P+++A ++ Sbjct: 289 NDQTIEVMENDLVIADDDGPLALAGVMGGLESAVETNTTNIFIESAFFTPLSMAGKARSY 348 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ TDS +RFERGVD L +++LI+ CGG S + + + I S+ Sbjct: 349 GLNTDSSHRFERGVDFSQTEHALTRVINLIIEHCGGQTSQVSSVSHDLPQRNPIQLRPSK 408 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R+ G DV ++ ++IL L + F V+ P++R D+E + DLVEE++R+ G D Sbjct: 409 VTRILGRDVSQDEVVQILNNLDLPFTLDDGVFTVTPPAYRFDLEIEEDLVEEVIRVAGYD 468 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSVLFG 525 I + + K L+ + S+ RY ++ ++ E+V++SFI + Sbjct: 469 NIGA-------MNPKIMLNPRSSKDRYSDVRKIRHTMSDLGYSELVSYSFIDEAMESTVH 521 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQ 584 G +++ NPI+ +M+ MR+ L + A N +R FE+++ + D + Sbjct: 522 GNDTLIKLENPIAENMNTMRSRLWSSHIDALKFNTNRGRTQIKFFEITNKFTQDNSNFSE 581 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + +G+ G E + W +K+ R D +D K+D ++ + +++ + Sbjct: 582 EQVLSGLVSG----EAIPKNWIEKN----RAHDFYDVKSDLEQLLGDGI---TMKQSAEN 630 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 S +HPG+S I + + G G+ HP++ + EVYL I ++ + Sbjct: 631 VSAFHPGQSADIFIDNKKI-GCLGKLHPSLQKQLDVDQ-----EVYLFEIGLNHLSKNDF 684 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGEGK 762 K + P++RD+A +VD+ + AG +V+++ +N++ I D +FDV+QG+ + EGK Sbjct: 685 KLNTEILKSVPLQRDIAVLVDEDVVAGDVVDVVSKRNIN-FIKDFRIFDVYQGQGIDEGK 743 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A +L+Q T + D+ + ++ + K+ NA LR Sbjct: 744 KSLAFLILMQDTYKTLEEKDVEKSVTEVINLLKKEFNAELR 784 >gi|293610416|ref|ZP_06692717.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292827648|gb|EFF86012.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 793 Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 253/824 (30%), Positives = 417/824 (50%), Gaps = 50/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + E + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSETLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPTDAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E +I +I E K + + + +K V A P WM Sbjct: 178 EIAVINQLQMNEADIKS--VDATIADEKKVVISTEGAPR-YLGRVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDIMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKTEILPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G + + L RLG V + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYQLTADFIADALNRLGCEVTVKAEGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------ELRQTIVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 NPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQDAKSIEDLK 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFES 642 Q A + GS E W K + +D FD K + ++ V ++ +R E Sbjct: 588 QIPTLALVAVGSQQPES----WHVKPQP----MDFFDFKGEIEEIMAAGRVKVEYVRSER 639 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +W HPG+S I + + GY G HP++ + L+ + LD + Q + Sbjct: 640 ---AWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLT---TTWVAELDQTAVLQ---S 689 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 LS ++RD+A ++ +I + +I K L+D +FDV+ G+ + EG Sbjct: 690 YVSNFTELSRFPSIRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQGVEEG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 K+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 750 KRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|169634331|ref|YP_001708067.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii SDF] gi|169153123|emb|CAP02197.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii] Length = 793 Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 253/828 (30%), Positives = 416/828 (50%), Gaps = 58/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAVLP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEINLEDKIDGLLELPADAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKAGTPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQEDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I +A P++ I +V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVAEKSDLLPKREAIELKQVQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTVQANGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 SPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLK 587 Query: 586 ------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSL 638 +A G R+ S W K + +D FD K + ++ V ++ + Sbjct: 588 QIPTLALVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYV 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 636 RSER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ 688 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ Sbjct: 689 ---SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQG 745 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 746 VEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|284045068|ref|YP_003395408.1| phenylalanyl-tRNA synthetase subunit beta [Conexibacter woesei DSM 14684] gi|283949289|gb|ADB52033.1| phenylalanyl-tRNA synthetase, beta subunit [Conexibacter woesei DSM 14684] Length = 803 Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 267/817 (32%), Positives = 394/817 (48%), Gaps = 68/817 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALS--PFTIVKVLSVERNPDL 58 MK LSWL +H D+ + + L G EVE+V + S F + +VL E++PD Sbjct: 1 MKVPLSWLHEHCHPDLGADALATRLALTGTEVERVLHHGVPSEESFVVARVLEAEQHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + +QVVCGAPN R G+ A PG+ +P+ + K+RG+ S GM Sbjct: 61 DRLRVTQLDVGEDEPVQVVCGAPNARAGITVALARPGARLPDGTKLKKA-KLRGVVSHGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 + E E+ + D + IMEL D G L + L LS ++++ +TPNR DC+GV G+A + Sbjct: 120 ILGESEVDIGVDHSGIMELDGDLIPGTPLGNVLPLSTDVLELEVTPNRPDCLGVYGVARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + AA L L S+ PLE ++ C F + V +P+W++ R Sbjct: 180 VHAATGAPLGSAPWEQDLGSDG-PLEGAEVAVETERCPRFTVRIFDNVTIGPSPHWLKAR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYD 296 L A G R IS +VDITNY L G+P H FD R++ LTVR G+ + LD + Sbjct: 239 LMAAGQRPISNVVDITNYAMLLTGHPLHAFDLDRVAGGRLTVRDGRDGDVLETLDGETRR 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVI S+AG++GG + D TT VL+E A W+ NI R+ LG+ +++ Sbjct: 299 LDADMVVICDADGPTSLAGVMGGARSEVHDGTTRVLMESASWNGPNIQRTSTRLGLRSEA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMNSEVK 412 RFE+G+ + + L++ L G T D+ + I ++ V Sbjct: 359 SGRFEKGLSPEQAMEAQTVATRLMVELTGATVRPGTLDVAGSAGWDGAHATIRLRDARVS 418 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQ 471 L G +VP S IL LGF D +V+VP +R+ DV +ADL+EE+ RI GVD+ Sbjct: 419 GLLGAEVPRSRSAEILSALGFGTADAADGLDVTVPHFRRNDVTREADLIEEVARIDGVDK 478 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS---VLFGGGQ 528 + + LPL + R QQ R R LA + EV+ WS+ E + L Sbjct: 479 LPAT-LPLRRGAAGRLTPWQQLRRRAAD-TLAGAGLHEVIGWSWSPPELADRLRLPAEDP 536 Query: 529 RELEIL--NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 R I NP+SA+ +RT+L+ GLL RNV IAD AIFE VY P G Sbjct: 537 RRAAIAVENPMSAEHGLLRTTLIGGLLDVARRNVTHGIADVAIFESGAVY---LPAGNGE 593 Query: 587 MAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR----F 640 + + G+ R W + D F AK + LD+LR Sbjct: 594 LPHEPHLLGVLLTGAARPATWREPQPPES---DFFAAKGVLAHL------LDALRVDWSV 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI-------------LDFFGLSNPICGF 687 E GA + HPGR+ + V G+ GE HP I LD + + G Sbjct: 645 EPGAEPFLHPGRAASVLAGGHRV-GWLGEIHPAIAADWDLERTAAFTLDLSAVIGAVAGP 703 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 VY D +S V++DLA ++ +PAG +V I++ L+ D Sbjct: 704 AVYAD-----------------YTSFPEVRQDLAVVLADDVPAGEVVRIVREAGGPLLAD 746 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 VFDV++G +GEGK S+A+++ + + T DD++ Sbjct: 747 AEVFDVYRGAQVGEGKVSLALRLAFRSPERTLTDDEV 783 >gi|322383716|ref|ZP_08057467.1| phenylalanyl-tRNA synthetase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151928|gb|EFX44871.1| phenylalanyl-tRNA synthetase subunit beta-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 816 Score = 360 bits (923), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 263/841 (31%), Positives = 437/841 (51%), Gaps = 64/841 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV-ERNPDL 58 MK + WL ++LD T + E++ + T G+EV+ V+NR +V + E++PD Sbjct: 1 MKVSYKWLSEYLDVTGYTAEELAEKYTRSGVEVDIVENRNLGVSGVVVGYVKTKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ES GM Sbjct: 61 DKLNLCTVDAGQGEDLQIVCGAKNVDAGEKVPVALIGAQLP-GGLKIKRAKLRGVESQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL L+D I+ LP + VG + D L+L D ++++ LTPNRSDC+ + Sbjct: 120 ICSARELGLNDKLLPKEIQEGILVLPENLEVGRSILDVLDLDDKVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGK-LKEINISCPLSS--------ESIPLEIKFDLDDSSLCKGFAMCCV 222 G A ++ A LGK +KE ++ L+S E+I +EI C +A + Sbjct: 180 LGAAYEM-GAILGKPVKEPDVEASLASRKGMTKAEETISVEITA----REQCSHYAARLI 234 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 +GV + +P W++ RL A G+R I+ +VD+TNYV L+ G P H FDA ++++ L VR A Sbjct: 235 EGVTISASPLWLKNRLMAAGIRPINNIVDVTNYVMLEYGQPLHAFDADQLTNGHLDVRLA 294 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE I++LD+ E L PD +VI + +IAG++GG ++ + T +L+E A + Sbjct: 295 REGETIVSLDDVERKLQPDMLVITDGTKPVAIAGVMGGTNSEVTEGTARILLESARFSGS 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYK 400 ++ ++ + LG+ ++S RFE+ V+ +G+IP L SLI L GG A I R + Sbjct: 355 SVRKTSRQLGLRSESSLRFEKEVNPEGVIPALNRAASLIAELSGGKIAEGIVETRVSEPE 414 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADL 459 P I ++V G ++ ED R+L+RL F+ D V VPS R+D+ DL Sbjct: 415 PVHIELSINKVNAYLGTELVKEDMNRVLDRLHFTYEESGADSVLVHVPSRRRDISRDVDL 474 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ R+YG D I + ++ V +L+ Q R ++ L + EV+ ++F + Sbjct: 475 IEEVARLYGYDSIPT--TLMSGVTTPGSLTDDQRIRRAIRNELTQTGLHEVITYTFTHLQ 532 Query: 520 Q----SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 Q VLF + + + P+S + S +RTSLLP LL+ N +R I D +IFE+ Sbjct: 533 QMNTLPVLFPDA-KPVSLAMPMSEERSILRTSLLPQLLEVAAYNRNRNIEDVSIFEIGSA 591 Query: 576 Y----ENDTPEGQK-----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 + E T + Q+ + G R G+ W E+ VD +D K A Sbjct: 592 FVTGQEKVTDQPQEIVLLSMLMTGKRHGAH--------W----REKAATVDFYDLKG-AF 638 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSG---IIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + ++ + + + + AP YHPGR+ + + +G G+ HP + L++ Sbjct: 639 ERVTNYLGITGIEYCAEAPEGYHPGRTAGVYLHTGDGKRKIGRIGQLHPVLQKQKDLADT 698 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR 742 EV L + I Q K+ L + RD+A +V +P + +I+ Sbjct: 699 YV-LEVELTPL-IEQAGFKIAYKL--LPKYPAISRDIAVVVSTEVPVADMQQVIRQTAGD 754 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L++++TVFDV+ G +GEGKKS+A ++ + + T +D+++ L R+V + +A L Sbjct: 755 LLEELTVFDVYTGVHVGEGKKSIAFSLIYRHPERTLQDNEVTELHGRVVNALEASFHAEL 814 Query: 803 R 803 R Sbjct: 815 R 815 >gi|293604705|ref|ZP_06687105.1| phenylalanyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] gi|292816874|gb|EFF75955.1| phenylalanyl-tRNA synthetase beta subunit [Achromobacter piechaudii ATCC 43553] Length = 805 Score = 360 bits (923), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 260/826 (31%), Positives = 428/826 (51%), Gaps = 43/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F SWL+ ++ ++ +++ LT GLEVE D A FT + ++ + +PD Sbjct: 1 MQFPESWLRTLVNPPIATDELAHRLTMAGLEVE--DTAPAAPAFTGVVVAHIVDIAPHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G + +Q+VCGAPN GL A G+ +P M + V K+RG++S+G Sbjct: 59 ADKLRVCQVDDGSGERLQIVCGAPNAAAGLKVPLARVGAELP-GGMKIGVAKMRGVQSSG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL LS D A ++ELP D G + + L+L D + + LTPNR+DC+ + G+A Sbjct: 118 MLCSARELGLSQDHAGLLELPADMVPGQSIREALDLDDTLFTLKLTPNRADCLSILGVAR 177 Query: 177 DLVAAGLGKLK-EINISCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNW 233 ++ A L ++ P++ E +P++I + LC FA ++GV A P W Sbjct: 178 EVAALTGAPLSVPTAVAVPVTLDERLPVKI----EAPELCGRFAGRVIRGVNARAATPEW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+ RL+ G RS+SAL+DI+NYV L+ G PSHVFD I ++VR A GE + L+ Q Sbjct: 234 MKTRLERAGQRSLSALIDISNYVMLELGRPSHVFDLDNIGGDISVRWAREGETLELLNGQ 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L P V+ + +++S+AGI+GG+ +T ++ +E A W P IA + Sbjct: 294 TVALDPKVGVVVAGEQVESLAGIMGGEATSVTLDTQNIYLEAAFWWPQAIAGRARRYKFS 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVK 412 +++ +RFERGVD + ++ I LI+ +CGG + + + R V M + Sbjct: 354 SEASHRFERGVDYASIPEHIEFITRLIVDICGGQVGPVD-DQVVNLPTRAPVRMRLARCH 412 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R+ G+ V E +I LG E D F VS PS+R D+E + DL+EE+ RIYG + I Sbjct: 413 RVLGVPVTQEQVAKIFASLGLEFTVEGDDFIVSPPSYRFDLEIEEDLIEEVARIYGFESI 472 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P P+ + + + + ++R+ A++ EVVN+SF+ + + G + Sbjct: 473 PDVP-PMARAKMFSQPEVHRG-AHALRRLTAAQDYQEVVNYSFVEADWERDYAGNDTPVR 530 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYMAAGI 591 ++NPI++ +S MR+SL+ GL+ N +R + +FE+ V+ D + + AG+ Sbjct: 531 LVNPIASHLSVMRSSLIGGLIANIRHNANRKQSRVRVFELGRVFMRDASAQDGPLEVAGV 590 Query: 592 RKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 R+ + SG W EE+ R VD FD K D ++ LRFE+ A Sbjct: 591 RQ---PMRLSGAAWGPAVEEQWGIATRQVDFFDVKMDVEALFG--ARGRRLRFEAAAHPA 645 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGRS I+ + V G+ GE HP L++ FE LD +S+ + + ++ Sbjct: 646 LHPGRSARIELDGKQV-GWIGELHPRWAQQADLAHAPVVFE--LDVQALSEGELPQVRE- 701 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKSLGE- 760 LS V RDLA VD + ++++ + + ++ D VFDV++ K+ G Sbjct: 702 --LSRQPVVVRDLALWVDAGVSTQSMLDTVFAAVKADAQLAVVQDARVFDVWREKAHGSE 759 Query: 761 --GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KS+A + +Q + T + + + RI + +V A R+ Sbjct: 760 PVTEKSLAFRFWLQDTEVTLDEARVADCLSRIKDALVSAHGARQRT 805 >gi|308068157|ref|YP_003869762.1| Phenylalanyl-tRNA synthetase subunit beta (Phenylalanine--tRNA ligase subunit beta) [Paenibacillus polymyxa E681] gi|305857436|gb|ADM69224.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) [Paenibacillus polymyxa E681] Length = 815 Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 252/838 (30%), Positives = 434/838 (51%), Gaps = 59/838 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 MK + WL +++ D VS E + + +T G+E+++++ R + ++ + V S E++PD Sbjct: 1 MKVSFEWLSEYVSLDQVSAEDLAEKITRSGIEIDELEQRNQGITGVVVGYVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNVCIVDAGQEEDLQIVCGAKNVDAGQKVPVAVVGAKLP-GDFHIKKAKLRGVVSMGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP DA VG ++ L L D ++D LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKELQEGILVLPEDAEVGMPITKLLALDDQVLDFDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLS-----SESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G A + V+A LG+ +I+++ P S++ + +D LC +A + GV+ Sbjct: 180 HGAAYE-VSAILGR--DISLADPAKDLVEISDAAADHLSVKVDTPELCTHYAARYITGVK 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W++ RL A G+R I+ +VDITNYV L+ G P H FDA ++ + + VR A +GE Sbjct: 237 VGASPLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADKLENGNIEVRLAHAGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+QE L P ++I + ++AG++GG ++ D T + +E A +D + + Sbjct: 297 TLITLDDQERKLEPHMLLITDGVKPIALAGVMGGANSEVTDATVSIALESAKFDGGTVRK 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + LG+ +++ RFE+ VD ++P + +LI GGT + +I+ Sbjct: 357 TSRQLGLRSEASLRFEKEVDPGAVVPAVNRAAALIQRYAGGTVHQGIVESASAKAENRII 416 Query: 406 FMN-SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEI 463 ++ ++ R G ++ + + I RL F E EV VP+ R D+ DL+EE+ Sbjct: 417 KLSLDKINRYLGTELSLLEVKTIFGRLHFGCGDAEQGVLEVEVPTRRGDITIDVDLIEEV 476 Query: 464 LRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 R+YG D I + P+ P T L+ QS R ++R+LA E +++SF+ + + Sbjct: 477 ARLYGYDNIPTTPIEGPTT----PGALTASQSLRRSLRRLLAHGGWQETISYSFVHPQST 532 Query: 522 VLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 LF G + + P+S D S +RTS++P +L N++R + AIFE+ V+ Sbjct: 533 GLFNALTEGSHPVRLAMPMSEDRSVLRTSIIPQMLDTAVYNMNRKQDNLAIFEMGTVFYT 592 Query: 579 D----TPEGQK-----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 + T + Q+ + G+R+ + W+ +E+ VD FD K +V Sbjct: 593 EEQTLTRQPQEIQVLSLLLTGVRR--------EKQWNIGAEK----VDFFDIKGSLETVF 640 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 + F S+R+ + P YHPGRS + +G G+ HP + +GL++ Sbjct: 641 DYFGLSASIRYVADQPQSYHPGRSASVWLDVNGNSQRIGTIGQIHPELQQSYGLNDTYVA 700 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLID 745 E+ L + + +++ S V+RD+A +V++ + AG L+ +I L+ Sbjct: 701 -EIALQQVVEHANSHIQFRELARFPS---VERDIALVVNKDVEAGELLRVIHAAGGELLQ 756 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D VFDVF G LGE KKSVAI + + + T D++I +V ++ + A LR Sbjct: 757 DARVFDVFTGSKLGEDKKSVAISLTYRHWEHTLTDEEINAAHTPVVTSLEQTFGAELR 814 >gi|241889986|ref|ZP_04777284.1| phenylalanyl-tRNA synthetase, beta subunit [Gemella haemolysans ATCC 10379] gi|241863608|gb|EER67992.1| phenylalanyl-tRNA synthetase, beta subunit [Gemella haemolysans ATCC 10379] Length = 797 Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 244/819 (29%), Positives = 420/819 (51%), Gaps = 38/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLK + + + + + + +T G+EVE V+ E +S + V+S E++PD + Sbjct: 1 MLVSYNWLKQYTNVEDNANALAEKITRGGIEVEGVEYLAEEISNVVVGYVVSKEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + +Q+VCGAPNV G + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCQVNVGEEENLQIVCGAPNVDAGQYVIVAKVGAKLP--GIKIKKAKLRGVESQGMI 118 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL LS S I + +G + + L L+D I+D+S+TPNR+D + +R Sbjct: 119 CSLAELGLSKSVVSKNYQEGIYVFETEQELGSDVVEVLGLNDYILDLSITPNRADALSMR 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+ +L A K+ ++ E+ L++ + D C+ + VK V +P Sbjct: 179 GLTYELGALYNNKVNFNDVEKEEKYEATSLQVAIESDS---CRNYVGQIVKNVEVKSSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ RL G+R I+ +VDITNYV L+ G P H FD + D + VR A GE + LD Sbjct: 236 WLQTRLMNSGIRPINNIVDITNYVLLEFGQPMHAFDKDLVGDKIVVRDAKEGEVLETLDG 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L ++VI R ++ G++GGK+ + T ++++E A ++P ++ R+ G+ Sbjct: 296 EERKLQTTDLVITDGTRAIALGGVMGGKNTEVSEETKNIILESAYFNPTSVRRTSAAHGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +DS RFE+G+D L V LIL LC + + + + + S + Sbjct: 356 RSDSSARFEKGIDPNMQKAALARAVELILELCPNAVVESSVGVVNKEEEKVVEITTSYIN 415 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 GI + E+ + ILE L FSV + V VP+ R D+ K DLVEE++RIYG D + Sbjct: 416 NYLGITLSTEEIVAILEGLSFSVEVTGENLVVKVPTRRPDISIKQDLVEEVIRIYGYDNL 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQREL 531 S LP K L+ Q R ++ V AS + +N+S +S+E++ + ++ Sbjct: 476 AS-TLPKFSKTTKGGLTYSQRMVRDLRAVYASLGFNDTINYSLVSEEEATEYTLEDHHKV 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKY 586 +L P++ S +R SL+PGLL NV R D + E+ V+ +N P+ Y Sbjct: 535 RLLMPMTETHSTLRQSLVPGLLNTVQYNVARKQKDLKLLEIGRVFFGSGDDNIQPKETLY 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFESGAP 645 ++A + +G E + + + S +D F AK L V+ + LD + ++ Sbjct: 595 LSAAL----TGEERATKWLKESSS-----LDFFVAKG-YLEVVFNCLGLDEKVTYKKSKL 644 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR + E +G+ GE HP + D GL N FE+ LD + K + K + Sbjct: 645 EGMHPGRFAEVYL-GEKRIGFIGEVHPQVADKLGL-NTTYVFEINLDEVISESKVKPKYE 702 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 +V + + RD+A +VD + N+I++V+ +LI V +FD++ G L GKKS Sbjct: 703 EV---TKYPEITRDIAMLVDVKDEYQNIYNVIESVNSKLITKVELFDLYVGAELLVGKKS 759 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A+ + + T D+++ + D+++ + + + A++R Sbjct: 760 LALTITYSDKQKTLTDEEVTAVHDKVL-SALTEYGAIIR 797 >gi|118595084|ref|ZP_01552431.1| pheT; phenylalanyl-tRNA synthetase beta chain protein [Methylophilales bacterium HTCC2181] gi|118440862|gb|EAV47489.1| pheT; phenylalanyl-tRNA synthetase beta chain protein [Methylophilales bacterium HTCC2181] Length = 787 Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust. Identities = 247/813 (30%), Positives = 423/813 (52%), Gaps = 36/813 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+F+ SWL++ D+ + + TLT G+EVE + + LS +V +++++E++PD D Sbjct: 1 MQFSKSWLQEFFDSSLDAIDLAQTLTIAGIEVEDIQDLSGLSDQIVVGEIVAMEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN R+G+ A G+ +P + K+RG+ES GM+ Sbjct: 61 RLNVCQVDVGANDLLQIVCGAPNARIGIKIPCAMVGAKLP--GFDIKKAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL LS ++ + EL +G + D L L+D I +S+TPNR+DC+ ++GIA ++ Sbjct: 119 CSAKELGLSQEADGLYELSSSLVLGQTIIDALALNDSIYHLSITPNRADCLSIKGIAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 A LK + L + + K ++D LC + ++GV N P ++ Sbjct: 179 AALSDLTLKNKDTVQNLQYKKNNTQ-KVVIEDPVLCARYVGMLIQGVDNKKKLPEFITHY 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+ SI+ +VDITNYV L+ G P H FD +I + VR+A +GE +L ++ E Sbjct: 238 LERGGVSSINPIVDITNYVLLETGQPLHAFDHDKIDGNIRVRKALNGEALLTINQLEIVF 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 ++IA + ++AGI+GG + + +T++ +E A +DP I+ ++ G+ TDS Sbjct: 298 DGGELIIADNSGPLALAGIMGGHLSSTQEGSTNIFLESAYFDPAAISGRARSFGLNTDSS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-IARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD ++ +LI+ CGGT I N+ +P I+ +V + G Sbjct: 358 HRFERGVDFGYTRNAAEYAAALIMQYCGGTIDGSADITGNLPERP-AIILRVKKVTDVMG 416 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + + + IL++L F + F V P++R D+ + DLVEEI+R+YG D I P Sbjct: 417 VRISDIEIKAILKKLRFEFTYDESIFSVIPPTYRFDMSIEEDLVEEIIRLYGYDNI---P 473 Query: 477 LPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 E K + Q+ + +K LA+ EV+++SFI KE + G + + N Sbjct: 474 ALAPSTEAKILPVDSQKKDVKTIKNALANLGYNEVISYSFIGKEVEIGLHGNSTPIALKN 533 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI++ + MR+ L L+ N++R + IFEV+ VY Y A + G Sbjct: 534 PIASHLDVMRSHLWGSHLEVLVYNLNRNQKNVKIFEVASVY---AKHKGGYTEAKVLSGL 590 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA---PSWYHPGR 652 + WS E+ R ++ +D K D IE +S ++L F A P+ +HPG+ Sbjct: 591 VYGDHLPEQWS----EKIREINYYDIKGD----IET-ISSNTLSFRKPATDLPAAFHPGK 641 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + S +G+ G+ HP+ + L + YL I I + K S Sbjct: 642 VAEVMLS-NTRIGWVGQLHPSWQQKYELPR-----KAYLFEIDIEKVGEVKGLSYTIPSK 695 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 P++RD++ ++++ + G + + K + LI ++ FD+++G+ + +GKKS+A +L Sbjct: 696 FIPIRRDISLVMNKDVVVGEAIESVYAKQIPGLI-ELQAFDIYEGEGIEKGKKSIAFLIL 754 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 IQ T D DI ++D++++ + A LR Sbjct: 755 IQDTYKTLEDSDIANVVDQVIKVMESNYEAKLR 787 >gi|169797147|ref|YP_001714940.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii AYE] gi|213156062|ref|YP_002318107.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|215484610|ref|YP_002326845.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB307-0294] gi|301347475|ref|ZP_07228216.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB056] gi|301510733|ref|ZP_07235970.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB058] gi|301596051|ref|ZP_07241059.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii AB059] gi|332856886|ref|ZP_08436295.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332867211|ref|ZP_08437476.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] gi|169150074|emb|CAM87968.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AYE] gi|213055222|gb|ACJ40124.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB0057] gi|213985871|gb|ACJ56170.1| phenylalanyl-tRNA synthetase, beta subunit [Acinetobacter baumannii AB307-0294] gi|332726940|gb|EGJ58445.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013150] gi|332734150|gb|EGJ65282.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6013113] Length = 793 Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 253/828 (30%), Positives = 417/828 (50%), Gaps = 58/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAILP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPNDAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V + P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKASTPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQDDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I + P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVVEKSDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + D ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTVKADGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 SPLMLANPISSDLAAMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLK 587 Query: 586 ------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSL 638 +A G R+ S W K + +D FD K + ++ V ++ + Sbjct: 588 QIPTLALVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYV 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 636 RSER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ 688 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ Sbjct: 689 ---SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQG 745 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 746 VEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|149911613|ref|ZP_01900225.1| phenylalanyl-tRNA synthetase beta subunit [Moritella sp. PE36] gi|149805334|gb|EDM65347.1| phenylalanyl-tRNA synthetase beta subunit [Moritella sp. PE36] Length = 795 Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 246/818 (30%), Positives = 410/818 (50%), Gaps = 39/818 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + ++ E++ +T GLEV+ +D + + V+ +PD D Sbjct: 1 MKFSNEWLQTWVKPGLTNEELAHQITMAGLEVDGIDAVAGDFTGIVVGHVVECGPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + I +VCGA N R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLQVTKIDIGAEELIDIVCGATNCRAGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE E+ +++ + IMELP DA G + + L L D I+V LTPNR+DC+ + GIA ++ Sbjct: 120 CSESEMGMAESADGIMELPSDAVPGTCIRECLGLDDVTIEVDLTPNRADCLSIAGIAREV 179 Query: 179 VAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L I ++ P +E+ + + + C + + + P WM Sbjct: 180 -----GVLNNIAVTAPEWTNVTETSTETVSVSVTATEQCPRYLGRVITNLDMLAKTPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ G RSI +VD+TNYV L+ G P H FD + ++ + VR A EK+ LD E Sbjct: 235 VERLRRCGTRSIDPIVDVTNYVLLELGQPMHAFDLATLTGAINVRLATQDEKLTLLDGNE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + +VIA D ++AGI GG+ G T +L+E A + P+ I + G+ T Sbjct: 295 VKLNDNTLVIADDSGAIAMAGIFGGEKTGVTATTNSILLESAFFSPLAITGRARAYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVK 412 DS +RFERGVD + ++ LI+ +CGG + + + P I ++ Sbjct: 355 DSSHRFERGVDSELQYKAMERATQLIVEICGGEVAPVVDVTTESALPTHAPINLRRHQLD 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G V IL LG S E D + V+ PS+R D+E + DL+EE+ R++G D I Sbjct: 415 KVIGFHVEDAKVTDILNSLGLSPTFENDTWTVTSPSFRFDIEVEVDLIEEVARVFGYDNI 474 Query: 473 KS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 + P+ ++ D +L R ++ ++ +R E + +SF+ ++ +L L Sbjct: 475 PNVAPVAPLKMTDHNEATLP---VRRIRDLMVNRGFQEAITYSFVDPKRQLLLHPEADHL 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG---QKYM 587 + +PIS +MS MR S+ GL++A N R +FE + ++++ E Q M Sbjct: 532 VLPHPISIEMSVMRVSMFTGLIEAVVSNQKRQQQRIRLFETGLTFIKDESVENGVLQVPM 591 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 I G++ E W+ +S + VD FD K D ++++ + D + + Sbjct: 592 LGAIIAGTANAES----WNQES----KSVDYFDLKGDLDALLDQTCNSDEFVLKRASHPG 643 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S I V G+ G HP++ GL+ E+ L ++ K + Sbjct: 644 LHPGQSAEIFHGGRSV-GHIGAVHPSLEKKLGLNASTIILEIELATL-----TSRKLPQA 697 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSV 765 + +S +RD+A IV + AG ++N IK V ++L+ + +FDV+QG + EG KS+ Sbjct: 698 LEVSKFPANRRDIAMIVKDDVNAGDVLNFIKKVGGNQLV-GINLFDVYQGTGVVEGHKSL 756 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI + +Q + T + +I ++ IVE + + NA LR Sbjct: 757 AISLTLQDISRTLEEKEISEAVNNIVEGISSEFNASLR 794 >gi|257092830|ref|YP_003166471.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257045354|gb|ACV34542.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 791 Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 259/819 (31%), Positives = 421/819 (51%), Gaps = 45/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWL+ +D + ++ LT GLEVE+ V + +VL V ++PD D Sbjct: 1 MKFSESWLRSFVDPACAGDEFSHLLTMAGLEVEEEVTVAPHFGGVVVAEVLEVGKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + +Q+VCGAPN G+ A PG+ +P + + V K+RG+ES GM+ Sbjct: 61 RLHVCRVDVGSGEPLQIVCGAPNAAAGIKVPCALPGAELP-GGLTIKVSKVRGVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL ++DD+ ++ L +DAPVG + YL+L D ++ + LTPNR+DC+ + GIA ++ Sbjct: 120 CSARELGITDDATGLLVLAVDAPVGDDIRRYLDLDDRLLTLKLTPNRADCLSLEGIAREV 179 Query: 179 VA--AGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWM 234 A + + ++ +S+ + + LD C + + GV + P WM Sbjct: 180 AALTGAPARFAAVEAVAATISASRVVV-----LDAPQACPLYCGRIIAGVDAGAMTPGWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R+RL+ G+R ISALVDITNYV L+ G P H FD +R++ + VR A + E I+ L+ Q Sbjct: 235 RRRLERSGIRPISALVDITNYVMLELGQPLHAFDNARLTGAIHVRMARNRESIVLLNEQT 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L D ++IA + R ++ GI+GG G TT+V +E A + P IA + ++ Sbjct: 295 LELQEDVLLIADERRPVAMGGIMGGADTGITSVTTEVFLESAFFAPKAIAGRARRYNFVS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+ +RFERGVD G L+ LI+ +CGG A + A + + + V R+ Sbjct: 355 DASHRFERGVDFGGTRRALERATRLIIDICGGQAGPLSEALATLPERSPVRLRPARVVRV 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ V E +L RLG + F V+ P+ R D+E + DL+EEI R++G + I + Sbjct: 415 LGMAVSTERIAELLSRLGLPFTRNGEDFIVTPPTSRFDIEIEEDLIEEIARLHGYENIPA 474 Query: 475 EPLP------LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 P+P L Q E R + ++++LA EVVN++F+ + F G Sbjct: 475 -PVPRALMSMLPQTEAVRP-------CQRIRQILADCGYQEVVNFAFVEEAWEADFAGNA 526 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + + NPI++ +S MR++L+ GL+ N+ R +FE + D G Sbjct: 527 KVIRLANPIASHLSVMRSTLIGGLVANVATNLRRRQNRVRVFETGRCFSRDPLGGP---V 583 Query: 589 AGIR---KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 AG R K S+ GS ++ R VD FDAK D ++ P + RFE A Sbjct: 584 AGFRQPWKLSALAYGSA--LPEQWGSALRNVDFFDAKGDLERLLAPLAA----RFEKTAH 637 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS + + G+ GE HP + L FE+ LD++ + Sbjct: 638 PALHPGRSAAVVVDGRTI-GFVGELHPRWQQKYELPLVPVLFELDLDALTV-----IPLP 691 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + +S V RD+A +VDQ + L + + +N ++ ++ +FDV+ G + GKKS Sbjct: 692 RYAEVSRQPLVIRDIAIVVDQALELQQLDDGLRRNSPAIVRNIKLFDVYAGSGVEAGKKS 751 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A ++++Q + T + D+ M ++ + + A LR Sbjct: 752 LAFRIVMQDTQKTLLEADVDAAMQQLTAYLSEAFAARLR 790 >gi|241764283|ref|ZP_04762313.1| phenylalanyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] gi|241366352|gb|EER60882.1| phenylalanyl-tRNA synthetase, beta subunit [Acidovorax delafieldii 2AN] Length = 815 Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 255/854 (29%), Positives = 416/854 (48%), Gaps = 91/854 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL++ + ++ ++ +TLT GLEVE++ R PFT + V ++ ++PD Sbjct: 1 MQFPESWLREFCNPPLTTAELAETLTMAGLEVEEL--RPVAPPFTKIVVGEIKEAVQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + +VCGAPN RVG L+G PPG ++ V K+R Sbjct: 59 ADRLRVCQVDVGQGALLNIVCGAPNARVGIKVPCALVGAELPPGD--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL + APVG + +L L D + + LTPN + C+ Sbjct: 117 GVESQGMLCSARELKLSEDHGGLLELDVSAPVGQDIRVHLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSS--LCKGFAMCCVK 223 V GIA ++ A PL S P LE K + S+ LC F+ V+ Sbjct: 177 VYGIAREVSAL---------TGAPLQQPSFPPVQAKLEDKLPVTVSAPDLCGRFSGRIVR 227 Query: 224 GVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 V A P WM RL G R +S LVDI+NYV + G PSH+FD +I L VR Sbjct: 228 NVNTRAATPQWMLDRLARCGQRGVSPLVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGK 287 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +GE++ L+ + VIA +++S+AGI+GG D+T +V +E A W P Sbjct: 288 AGEQLKLLNGNTITVDDKVGVIADGQQVESLAGIMGGDATAVSDDTKNVYIEAAFWWPKA 347 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--- 399 +A + TD+ +RFERGVD + ++ I L++ +C GT C + Sbjct: 348 VAGRSRRFNFSTDAGHRFERGVDPSLTVEHIERITQLVIDIC-GTPETACGPMDDQQVNM 406 Query: 400 -KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +P+ + + ++ G+ + L LG V+ V+ PS+R D+ + D Sbjct: 407 PQPQPVTLRVARAAKVVGMPLTQAQCADALRGLGLPVVEGEGTLTVAPPSYRFDITIEED 466 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFIS 517 L+EE+ R+ G + + + P PL + K L+ + +R+ + V+R LA E +N+SF+ Sbjct: 467 LIEEVARMVGYNNLPTTP-PLAPITPK--LAAEATRSPFAVRRALAGLGYQETINFSFVE 523 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + + +++LNPI++ MS MR++LL LL+ N+DR +FE+ V+ Sbjct: 524 ERWEHELAANAQPIKLLNPIASQMSVMRSTLLGSLLQVLKFNLDRKAERVRVFELGRVFL 583 Query: 578 NDTPEGQKYMAAGIRKGSSGIEG-------SGRL--------WSDKSEERCRFVDLFDAK 622 D AG+R + +EG SG W K + +D FD K Sbjct: 584 RD---------AGVRNTDTTVEGFHQPMRVSGLAYGPNDVLQWGRKEQA----IDFFDVK 630 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 D +++ P + FE G HPGR + + G+ GE HP + L Sbjct: 631 GDVQALLAPLRAT----FEPGTHPAMHPGRCARVLLDGRAI-GFVGELHPQWRQSWDLPQ 685 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-- 740 FE+ LD+ + Q+ + K V + V+RD+A +V + + +++ I Sbjct: 686 APVMFELELDA--VQQRAVPQFKPVAKHQA---VERDVAVVVAERVTHTEVMDAIAAAVP 740 Query: 741 DRLIDDVTVFDVFQGKSL--GE---------GKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 ++ +FDV++ K L GE G+KS+A+++ + + T + +I M Sbjct: 741 GTMLRSAVLFDVYRPKPLRAGEVAPAGGLAAGEKSLAVRLTLGRDEATLTEAEIEAAMQA 800 Query: 790 IVENVVKKTNAVLR 803 +V +V +T LR Sbjct: 801 VVAQLVARTGGRLR 814 >gi|184156926|ref|YP_001845265.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii ACICU] gi|332873997|ref|ZP_08441932.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] gi|183208520|gb|ACC55918.1| Phenylalanyl-tRNA synthetase beta subunit [Acinetobacter baumannii ACICU] gi|322506822|gb|ADX02276.1| pheT [Acinetobacter baumannii 1656-2] gi|323516691|gb|ADX91072.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii TCDC-AB0715] gi|332737738|gb|EGJ68630.1| phenylalanine--tRNA ligase, beta subunit [Acinetobacter baumannii 6014059] Length = 793 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 253/828 (30%), Positives = 417/828 (50%), Gaps = 58/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 MK + +WL+ ++ + + + D LT +GLEV+++ PFT V +VL+VE++PD Sbjct: 1 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDEL--APVAKPFTGVVVGEVLTVEQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ES G Sbjct: 59 ADRLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAILP-GDFKIKKGKLRGVESQG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+C E+ L D ++ELP DAPVG + +YL+L D +ID+S+TPNR DC +RGIA Sbjct: 118 MLCGASEIDLEDKIDGLLELPDDAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 ++ ++ E I ++ + ++ + D + G +K V A P WM Sbjct: 178 EVAVINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLG---RVIKNVNVKAATPEWME 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 Q L G+R+ S LVD+TNYV ++ G P H FD ++I + VR+A EK+ L++QE Sbjct: 235 QALARSGIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEV 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L D +VIA D + +IAGI+GG + D+TTD+ +E A + P+ IA + G+ TD Sbjct: 295 ELQDDVMVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKR 413 S R+ERGVD + + + LI L GG I + P++ I ++V + Sbjct: 355 SSQRYERGVDFELPLIAMNRASQLIQELAGGEFGPITVVEKSDLLPKREAIELKQAQVDQ 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L G V E L RLG V + + ++ V PS R D+ DL+EE+ RI G D I Sbjct: 415 LLGYKVAAEFITDALTRLGCEVTVQANGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNI 474 Query: 473 K----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + S + L + +D+ ++ +++ + + E +++SF + Sbjct: 475 QISLPSMDVQLAKYQDRFEIA-------QLRQTVVTLGYQEAISFSFADAKLEKQLNPQV 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--- 585 L + NPIS+D++ MR++LL L+ N++R + FE+ ++ + Sbjct: 528 SPLMLANPISSDLAVMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLK 587 Query: 586 ------YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSL 638 +A G R+ S W K + +D FD K + ++ V ++ + Sbjct: 588 QIPTLALVAVGSREPES--------WHAKPQP----MDFFDFKGEVEEILAAGRVKVEYV 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E W HPG+S I + + GY G HP++ + LS + LD + Q Sbjct: 636 RSER---PWLHPGQSAEILVDGQSI-GYLGRLHPSLENELDLS---TTWVAELDQAAVLQ 688 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + LS V+RD+A ++ +I + +I K L+D +FDV+ G+ Sbjct: 689 ---SYVSNFTELSRFPSVRRDIALLISDNINVRDIQQLIEKTGGELLDSTWLFDVYTGQG 745 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGK+S+A +L Q T D +I+ MD I++ + A LR+S Sbjct: 746 VEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQVLENTYQATLRAS 793 >gi|171058433|ref|YP_001790782.1| phenylalanyl-tRNA synthetase subunit beta [Leptothrix cholodnii SP-6] gi|170775878|gb|ACB34017.1| phenylalanyl-tRNA synthetase, beta subunit [Leptothrix cholodnii SP-6] Length = 816 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 253/827 (30%), Positives = 403/827 (48%), Gaps = 59/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL++ + ++S + + LT G+EVE+ A + ++L E++P+ D Sbjct: 1 MQFPESWLREFCNPELSSDALAHLLTMSGMEVEEQRPVAPAFHGIVVAEILEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQE---IQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKI 109 + +D G H +Q+VCGAPN R G+ +G PPG + K+ Sbjct: 61 KLRVCTVDAGPHSPDGPLQIVCGAPNARAGIRIPLATIGAELPPGE--DGKPFKIGKGKL 118 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 RG+ES GM+CS +EL LS+D ++ELP DAP+G + +L L D + + LTPN C+ Sbjct: 119 RGVESFGMLCSARELKLSEDHGGLLELPADAPLGQDIRQFLNLDDALFTLKLTPNLGHCL 178 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A ++ A L I S L ++ + D LC F+ V+G+ Sbjct: 179 SVYGVAREVSALTGSPLITPAIEPVRPSHDARLPVRIEAPD--LCGRFSGRIVRGINPQA 236 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WM +RL G RS+SALVDI+NYV + G PSH+FD +I L VR +GE + Sbjct: 237 RTPAWMVERLARCGQRSVSALVDISNYVMFEYGRPSHIFDLDKIQGGLVVRWGRAGETLK 296 Query: 289 ALDNQEYDLSPDNVVIASDG----RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 L+ L VIA + ++S+AGI+GG D+T +V VE A W P +A Sbjct: 297 LLNGNTVTLDEQVGVIADEHAGQQSVESLAGIMGGDTTAVSDDTRNVYVEAAFWWPEAVA 356 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC------IARNIT 398 + TD+ +RFERGVD + ++ I +LI+ +CGG A +C AR Sbjct: 357 GRSRRYNFSTDAGHRFERGVDPAQTVEHIERITALIVQICGG-ADTVCGPVDDQTARLPE 415 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +P + + ++ G+ + + ERLG V+ PSWR D++ + D Sbjct: 416 RQP--VALRVARAAKVIGMPLTQVQCAGVFERLGLPFTAGEGVLTVTPPSWRFDLQIEED 473 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L+EE++R+ G DQ+ P PL V R S Q + ++R +A+ E +N+SF+ + Sbjct: 474 LIEEVIRVIGFDQLPLTP-PLAPV-TARVRSESQRGSHALRRTVAALDYQETINFSFVEE 531 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G + + +LNPI+A +S MR+SL+ L++ N+ R +FE+ V++ Sbjct: 532 RWETELAGNDQPIRLLNPIAAPLSVMRSSLIGSLIQVLRHNLTRRAPRVRVFELGRVFKR 591 Query: 579 DTP-EGQKYMAAGIRKGSSGIEGSGRLW----SDKSEERCRFVDLFDAKADALSVIEPFV 633 D + + GI + +G W S + + R VD FD K D +++ P V Sbjct: 592 DASVQTSEQSVVGI---DQPLRLAGLAWGPADSVQWGSKERAVDFFDVKGDVQALLAPRV 648 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + RF + HPGR ++ V+G+ GE HP + L + FE+ L S Sbjct: 649 A----RFVAAEHPAMHPGRCARVEVDG-TVIGHVGELHPRWRQAYELPSAPVLFELDLAS 703 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVFD 751 + + V + V RDLA IV +P +++ I L+ +FD Sbjct: 704 L-----LAREVPVYVPVPRQQTVTRDLALIVKDSVPHDDVIDTIMQAPTGGLMRSARLFD 758 Query: 752 VF----QGKSLGEGKKSVAIQVLI----QPLKDTFRDDDIRILMDRI 790 V+ Q L EG++S+AI++ + PL D D I+ ++D + Sbjct: 759 VYRPTAQTTGLAEGERSLAIRLELLDDETPLTDARSDAAIQAVIDAV 805 >gi|310640950|ref|YP_003945708.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus polymyxa SC2] gi|309245900|gb|ADO55467.1| Phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus polymyxa SC2] Length = 815 Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 252/839 (30%), Positives = 437/839 (52%), Gaps = 61/839 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 MK + WL +++ D VS E++ + +T G+E+++V++R + ++ + V S E++PD Sbjct: 1 MKVSFDWLSEYVSLDQVSAEELAEKITRSGIEIDEVEHRNQGITGVVVGYVKSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNVCIVDAGQGEDLQIVCGAKNVDAGQKVPVAVVGAKLP-GDFHIKKAKLRGVVSMGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D I+ LP DA +G ++ L L D ++D LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKELQEGILVLPEDAEIGTPITKLLALDDQVLDFDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLS-----SESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G A + V+A LG+ I+++ P +++ + +D LC +A + GV+ Sbjct: 180 HGAAYE-VSAILGR--NISLADPAKDLVEINDAAADHLSVKVDTPELCTHYAARYITGVK 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W++ RL A G+R I+ +VDITNYV L+ G P H FDA ++ + + VR A +GE Sbjct: 237 VGPSPLWIQNRLMAAGVRPINNIVDITNYVMLEYGQPLHAFDADKLENGNIEVRLARTGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+QE L P ++I + ++AG++GG ++ D T + +E A +D + + Sbjct: 297 TLITLDDQERKLEPHMLLITDGVKPIALAGVMGGANSEVTDATVSIALESAKFDGGTVRK 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + LG+ +++ RFE+ VD +IP + +LI GGT + I+ Sbjct: 357 TSRQLGLRSEASLRFEKEVDPGAVIPAVNRAAALIQRYAGGTVHQGIVESASAKAENHII 416 Query: 406 FMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEE 462 ++ ++ R G ++ + + I RL F G+ + EV VP+ R D+ DL+EE Sbjct: 417 KLSLDKINRYLGTELSLLEVKTIFGRLHFGC-GDTEPGVLEVEVPTRRGDITIDVDLIEE 475 Query: 463 ILRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 + R+YG D I + P+ P T L+ QS R ++R+LA E +++SF+ + Sbjct: 476 VARLYGYDNIPTTPIEGPTT----PGALTASQSLRRSLRRLLAHGGWQETISYSFVHPQS 531 Query: 521 SVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + LF G + + P+S D S +RTS++P +L N++R + AIFE+ V+ Sbjct: 532 TALFNALTEGSHPVRLAMPMSEDRSVLRTSIIPQMLDTAVYNMNRKQDNLAIFEMGTVFY 591 Query: 578 ND----TPEGQK-----YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 + T + Q+ + G+R+ + W+ +E+ VD FD K +V Sbjct: 592 TEEQTLTRQPQEIQVLSLLLTGVRR--------EKQWNIGAEK----VDFFDIKGALETV 639 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 + F S+R+ + P YHPGRS + + +G G+ HP + +GL++ Sbjct: 640 FDYFGLSASIRYVADQPQSYHPGRSASVWLDVNGSSQRIGTVGQIHPELQQSYGLNDTYV 699 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 E+ L + + +++ S V+RD+A +V++ + AG L+ +I L+ Sbjct: 700 A-EIALQQLVEHANSHIQFRELARFPS---VERDIALVVNKDVEAGELLRVIHAAGGELL 755 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D VFDVF G LGE KKSVAI + + + T D++I +V ++ + A LR Sbjct: 756 QDARVFDVFTGSKLGEDKKSVAISLTYRHWEHTLTDEEINAAHSPVVTSLEQTFGAELR 814 >gi|222152842|ref|YP_002562019.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus uberis 0140J] gi|222113655|emb|CAR41570.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus uberis 0140J] Length = 801 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 250/827 (30%), Positives = 426/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ + DV ++ + +++ G+EVE V+ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVAIDVPSAELAEKMSTTGIEVEGVEIPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDEPRQIVCGAPNVRAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDAIIPKEFSEGIQILPDNAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A + VAA GK + + P S ++ +S +A V+ V +P W Sbjct: 180 VAHE-VAAIYGKELKFPVKTPQESSKATSDLISVAIESDKVLTYASRVVENVTVQASPQW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKILALD 291 ++ RL G+R I+ +VD+TNYV L G P H FD ++ D+L R+A +GEKI+ LD Sbjct: 239 LQNRLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDFNKFESGDILA-RQARNGEKIVTLD 297 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E DL ++VI + + ++AG++GGK D ++ V++E A++D I ++ L Sbjct: 298 GEERDLIDQDIVITVNDKPVALAGVMGGKATEIDSHSKTVVLEAAVFDGKAIRKTSGRLN 357 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+GV+ +I L +++ L GG + A + +P +++ Sbjct: 358 LRSESSSRFEKGVNYDTVIEALDFAAAMLEELAGGQVLAGYLQAGQVPTEPVQVLTTLDY 417 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V G ++ D + +LGF + G+ F VSVP R D+ +ADLVEEI RIYG D Sbjct: 418 VNVRLGTNLAYSDIEDVFAKLGFGLAGDAQAFTVSVPRRRWDISIQADLVEEIARIYGYD 477 Query: 471 QIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + LP T E L+ Q R V+ + + E+++++ + E++ F Sbjct: 478 K-----LPTTLPEAGGTAGELTASQLLRRRVRAIAEGAGLTEIISYALTTPEKAQAFAIE 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN------DT 580 L E++ P++ + S +R +++ G+L NV R + AI+E+ V+E D Sbjct: 533 SSHLTELMWPMTIERSALRQNIVSGMLDTIAYNVARKQKNLAIYEIGKVFEQNADPKVDL 592 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + A + +G + + + VD + AK ++E S +L+ Sbjct: 593 PNERDTFAFAL---------TGLVAEKDFQTQATAVDFYYAKG----ILESLFSKLNLKV 639 Query: 641 ESGAP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 A + HPGR+ I E + G+ G+ HP + + + + E+ L +I Sbjct: 640 TFVAEKDMASMHPGRTARILLGEETI-GFLGQVHPQVANDYDIPETYVA-ELNLQAI--- 694 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 + T+ +S V RD+A +VD + +V II+ + + ++ + +FDV+ G Sbjct: 695 EANMASTQIFTEISKQPAVSRDIALLVDDQLSHQDIVTIIEGLGLKYLESIKLFDVYAGT 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ GKKS+A + Q +++ RD+++ M++I E +++K NA +R Sbjct: 755 NIEPGKKSMAYSLTFQNPQESLRDEEVAKYMNKISEALLEKANAQVR 801 >gi|304404925|ref|ZP_07386585.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] gi|304345804|gb|EFM11638.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus curdlanolyticus YK9] Length = 813 Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 243/833 (29%), Positives = 438/833 (52%), Gaps = 51/833 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL ++++ +D++ +I + +T G+E++ V++ + ++ + V+S E++PD Sbjct: 1 MNVSYRWLNEYIEVSDLTAREIAEQMTRGGIEIDVVESLNKGVTGVVVGYVVSKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G + +Q+VCGA NV G A G+ +P + + K+RG+ES GM Sbjct: 61 DKLNVCQVDVGTGENLQIVCGARNVDAGQKVPVAVVGAKLP-GDFKIKRAKLRGVESQGM 119 Query: 118 MCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL L+D I+ LP + P+G + L + D ++++ LTPNRSDC+ + Sbjct: 120 ICSAKELGLNDKLLPKDQQEGILVLPAETPIGQSIGITLGIDDEVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K N S S++ I ++ + LC ++ ++GV+ +P Sbjct: 180 LGVAYEIAALTGREVKLPNTSVMHSADQASDHISVSIEATELCSHYSARYIRGVKVAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 W++ RL A G+R I+ +VD+TNYV L+ G P H FDA++++ + VR+A GE + L Sbjct: 240 QWLQNRLIAAGVRPINNVVDVTNYVMLEYGQPLHAFDAAKVAGGRIVVRQAKPGETLTTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L P +VIA + ++AG++GG ++ +TTD+L+E A +D + ++ + L Sbjct: 300 DDQERKLEPQMLVIADAEKAIALAGVMGGANSEVTADTTDILLESARFDGSTVRKTSRQL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD---ICIARNITYKPRKIVFM 407 G+ ++S RFE+ VD +I L SL+ G ++ I +NI +P + Sbjct: 360 GLRSESSARFEKEVDPGRVIAALNRAASLLEQCAEGHVTEGIVEAITKNI--EPSVVQVA 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFS-VIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +++ + G + + I RLGF + E F ++VP+ R ++ DL+EE+ R+ Sbjct: 418 LNKINQYLGTSLSKLEVEAIFLRLGFEGSLDENGVFTITVPTRRGEITRDVDLIEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D I P T +E L+ Q+ R +++ L + EV+++SF E++ L Sbjct: 478 YGYDNI-----PTTSIEGSTTPGALTKPQAIRRDLRKRLTDSGLNEVISYSFTGPERTKL 532 Query: 524 F---GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 F G + + P+S D S +RTSLLP LL+ N +R + A+FE+ V+ + Sbjct: 533 FPALTNGAVPVRLAMPMSEDRSVLRTSLLPQLLEMAVYNRNRKNENIAVFELGSVFHTEE 592 Query: 581 ------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 P+ +K+ A + G++ ++ W+ K+E + + AK +++ Sbjct: 593 EVLTHLPQ-EKHRFALLLTGNA-VQAQ---WNRKAEA----YNFYHAKGVVETIVNTLGI 643 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 S+RFE+ P +HPGR+ + E +GY G+ HP + L + + L Sbjct: 644 SGSVRFEAAQPEGFHPGRTAAVLLHTEAGWTTIGYVGQLHPALQQQSDLPDT---YVAEL 700 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVF 750 D P+ + + L ++RD+A +VD + AG L+ + L++ V +F Sbjct: 701 DLAPLYEYADFAIEYKT-LPRYPAMERDIAVVVDTAVQAGRLLETASETAGELLESVRIF 759 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV+ G+ LG GKKSVA+ ++ + + T D+++ L +V + + A LR Sbjct: 760 DVYAGEKLGAGKKSVALALVYRHAERTLTDEEVTELHSAVVTKIEQTFGAELR 812 >gi|299533561|ref|ZP_07046937.1| phenylalanyl-tRNA synthetase subunit beta [Comamonas testosteroni S44] gi|298718467|gb|EFI59448.1| phenylalanyl-tRNA synthetase subunit beta [Comamonas testosteroni S44] Length = 817 Score = 357 bits (916), Expect = 5e-96, Method: Compositional matrix adjust. Identities = 248/848 (29%), Positives = 431/848 (50%), Gaps = 76/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL+++ + +++ +++ DTLT GLEVE++D PFT + V ++ ++PD Sbjct: 1 MQFPESWLREYCNPNLTTQQLADTLTMAGLEVEELD--PVAPPFTGIVVGEIKEAVQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN RVG+ +G PPG+ + + K+R Sbjct: 59 ADRLRVCKVDIGQPELLDIVCGAPNARVGIRIPCATVGAELPPGA--DGKPFKIKIGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS KEL + +D++ ++E P DAP+G + +YL L D + + LTPN + C+ Sbjct: 117 GVQSFGMLCSAKELGIDEDASGLLEFPADAPLGQNVREYLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A +L A LK +S P ++ ++ ++ +D + LC F+ V+ V V Sbjct: 177 VYGVARELSALTGTPLKA--LSFPAAAVALQDKLPVKIDATDLCGRFSGRIVRNVNTQVK 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +IS L VR GE + Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFELGRPSHIFDLDKISGGLNVRWGKEGETLKL 294 Query: 290 LDNQEYDLSPDNV----VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 L+ + D+ VIA D +++S+AGI+GG D+T ++ +E A W P +A Sbjct: 295 LNGNTIKI--DDFLKVGVIADDKQVESLAGIMGGDATAVSDDTRNIYIEAAFWFPKAVAG 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---- 401 ++ TD+ +RFERGVD + ++ I +L+L +CG + + + KP Sbjct: 353 RSRHFNFSTDAGHRFERGVDPEFTTEHIERITALVLEICGTPETQVGAMDD--QKPNMPA 410 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADL 459 + + + ++ G+ V + L L LG + + V+ P++R D+ + DL Sbjct: 411 SKAVQLRVARAAKVIGMAVTQQQCLDALNGLGLPATVASEGVISVTAPTFRFDINLEEDL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISK 518 +EE+ R+ G + + + PL + K L + R+ Y V+ LA E +N+SF+ + Sbjct: 471 IEEVARMIGYENLPTTK-PLAPISPK--LRAENERSPYAVRHELAGLGYQETINFSFVEE 527 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + G +++LNPI++ +S MR+SLL LL+ NVDR +FE+ V+ Sbjct: 528 KWEQELAGNNNAIKLLNPIASHLSVMRSSLLGSLLQVLKFNVDRKAQRVRVFELGRVFFK 587 Query: 579 D--------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 D T +G Q AG+ G+ + +L ++E + VD +D K D ++ Sbjct: 588 DESVVDSDTTVKGFYQPMRVAGLAYGA-----ADQLQWGRAEVK---VDFYDVKGDVEAL 639 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + P + FE HPGR + + + G+ GE HP + L+ FE Sbjct: 640 LAPAKPV----FEPAEHPAMHPGRCARVLLDGKAI-GFVGELHPQWRQEWDLAQAPVMFE 694 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDD 746 + LD++ Q K ++ V+RD+A +V + + ++ ++ + ++ Sbjct: 695 LELDAVLARQVPVFKP-----VAKHQAVERDIAVVVKEAVTHAQVMEAVQQGVQGGILRS 749 Query: 747 VTVFDVFQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 +FDVF+ K SL + +KS+A+++ + + D +I M + +V Sbjct: 750 AVLFDVFRPKKLKAGEEAAPGSLAQDEKSLAVRLTLGSDTASLTDAEIEAAMQGTIAALV 809 Query: 796 KKTNAVLR 803 ++ A LR Sbjct: 810 ERVAARLR 817 >gi|297567466|ref|YP_003686438.1| phenylalanyl-tRNA synthetase subunit beta [Meiothermus silvanus DSM 9946] gi|296851915|gb|ADH64930.1| phenylalanyl-tRNA synthetase, beta subunit [Meiothermus silvanus DSM 9946] Length = 780 Score = 357 bits (915), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 256/813 (31%), Positives = 412/813 (50%), Gaps = 47/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTI-VKVLSVERNPDLD 59 M+ SWLK+ L S E++ + L +G E E ++ A P + +VLSVE P + Sbjct: 1 MRIVYSWLKEFLPDAPSPERLEELLAGLGHETETIERLAAPHPRVVFARVLSVEEIPGAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L +D G+ E QVV GAPN +VG+ A P + +P + ++VR I+G+ES GM Sbjct: 61 VKKLLLDAGR--EFQVVSGAPNAKVGIGVALALPKAVLP-GGLELSVRTIQGLESYGMAL 117 Query: 120 SEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S KEL + + + +ME P DA P G L++ D +I++ +TPNR D + V G A DL Sbjct: 118 SPKELAVGEYAGGLMEFPADALPPGTPLAEAWP-EDWVIEIEITPNRPDVLSVYGAARDL 176 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+ L + + IPL + ++D C F + + ++N +P +++RL Sbjct: 177 AALGMTLL---SPDPRPKTHQIPLPFQVWIEDPQGCDRFTLSYAQNIKNGPSPLAVQRRL 233 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A G+R ISA+VD TNY L+ G P H +DA I+ + VRRA GEK++ LD E Sbjct: 234 YAAGMRPISAVVDATNYTMLELGNPLHAYDARFIAAGIVVRRARPGEKLVTLDGVERLFD 293 Query: 299 PDNVVIA-SDGR---IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 P +++I DG + IAG++GG + ++TT V +EVA +DP++I ++ K G+ T Sbjct: 294 PKDLLITVKDGEETIPEGIAGVMGGARSEVREDTTAVALEVAHFDPVSIRKTAKRQGLKT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++ YRFERGVD G + + L+ G ++ I N T I F S RL Sbjct: 354 EASYRFERGVDPDGQVRSALRFMELVQQWTGAEVAEDRIDLNYTQPLTPIAFRPSYANRL 413 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G D P + L L+RLGF V G+ + +V+ P++R D+ + DLVEE+ RI G ++I Sbjct: 414 IGADFPPQAQLDALKRLGFRVKGQGEPHQVTRPTYRVDIAIEEDLVEEVARIIGYEKIPL 473 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 D + +K V+A EVVN+S+ S E+ L+ L + Sbjct: 474 ALPAFFPAPDNAGVDEPYRAKEKLKGVIAGLGFQEVVNYSWTSLEEVKLYRAPTPTLALA 533 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRA-IADFAIFEVSHVYEN-DTPEGQKYMAAGIR 592 NP +AD +++RT++ PGLL+ N+ + F +FE+ +V+ +T ++ + Sbjct: 534 NPQAADRTHLRTAIYPGLLRTLALNLAQGEEGPFLLFEIGNVFNQVETTRLGVLLSGEVV 593 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 G G ++ K L ++ A +L +LR E S HPG Sbjct: 594 PGLWQPGLGGGFYALKG--------LLESAATSLGA--------TLRVEKEGFSHLHPGI 637 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD--SIPISQKKRTKTKKVV-H 709 SG + + + V G G+ HP I L +VYL +P+ Q K T+ K V + Sbjct: 638 SGAVYWNGKKV-GCIGQLHPAIAAQAELP------QVYLAELELPLPQSK-TRFKDVAKY 689 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +SL RDLA +V + + + II+ + ++D+ +FDV++G L G+KS+A Sbjct: 690 PASL----RDLAVVVPEAVAYSEVERIIRESAGDYLEDLRIFDVYRGAPLEPGQKSLAFH 745 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + + + T D + M +++ + + A+ Sbjct: 746 LRFRHEERTLTDLETDGFMQQVIAAIERAGYAI 778 >gi|153004746|ref|YP_001379071.1| phenylalanyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. Fw109-5] gi|152028319|gb|ABS26087.1| phenylalanyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. Fw109-5] Length = 800 Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 259/821 (31%), Positives = 430/821 (52%), Gaps = 38/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ +L WL ++++ + +++ LT++G EVE ++ + L+ ++L+ E++P+ + Sbjct: 1 MRISLKWLSEYVELPAA-DEVARRLTAVGFEVEAIERVGQGLAGVVAARILASEKHPNAE 59 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +ID G+ + +QVVCGA N +VG + A G+ +P I K+RG+ES GM+ Sbjct: 60 KLSVTKIDAGEGEPLQVVCGAKNYQVGDVVPLATVGATLPGGTRIEKA-KLRGVESYGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L++D++ ++ L G +++ L L D +++V++TPNR D + G+A + Sbjct: 119 CSARELGLAEDASGLLILDRGIAPGTPIAEALGLEDVLLEVNVTPNRPDALSHVGLARE- 177 Query: 179 VAAGLGKLKEINISCP-LSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 VAA LG+ ++ + P L P +K ++ C +A V+GV+ +P W+ Sbjct: 178 VAALLGQ--QVRLPRPALREAGAPAAEAVKVRIEAPEKCARYAARVVEGVKIGPSPLWLA 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 +RL+A G+RSIS +VD TN+V L+ G+P H FD ++ + VR A GEK++ LD +E Sbjct: 236 RRLEACGVRSISNVVDATNFVLLELGHPLHAFDLDEVAGHEIVVRTARPGEKLVTLDGKE 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD+++IA R ++AG++GG + TT VL+E A + P I R+ + G+ T Sbjct: 296 RALEPDDLLIADRERGSALAGVMGGDVSEISAGTTRVLLESAWFTPGGIRRTSRRHGLKT 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKR 413 ++ YRFERG D +I + +LI L GGT I A ++ ++ Sbjct: 356 EASYRFERGADPGMVIAAVDRCAALIAELAGGTVRPGIVDAHPRPHRAPEVHLRWRRPGE 415 Query: 414 LSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L GIDVP E++ RIL LGF + + +VPSWR DV + DLVEEI+R G D I Sbjct: 416 LLGIDVPREEARRILGGLGFEERASDAEGAAFAVPSWRVDVSLEEDLVEEIVRTKGYDAI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ---- 528 E LP T V + Q R + L E VN+SF+++ + Sbjct: 476 -PETLPATAVRTPVEAADAQVTAR-AREALEGAGFSEAVNFSFVAERELAPLADPAAAVL 533 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 R + + NPISAD++ MRTSL+P LL+ N + + D ++E++ VY A Sbjct: 534 RPIALKNPISADLAVMRTSLVPSLLRNASTNRRQRVDDVRLYEIARVYRPAPAGSGAPAA 593 Query: 589 -----AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 AG+ G G W+ S+ VD +DAKA +V+E + +D R+ + Sbjct: 594 EAGELAGVLVGRRSPTG----WAAASDP----VDFYDAKAAVAAVLE-ALGIDG-RWRAR 643 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +W HP S + VLG GE HP + F L + F++ ++ S + + Sbjct: 644 GGAWLHPRISAEVLAQDGEVLGEVGELHPRVAAAFELPRGVFAFQLSGAALVRSARLVPR 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + + V RDLA +V + + AG ++ ++ + L++D T+FDV++G + GKK Sbjct: 704 YGGIPRFPA---VLRDLAVVVAEDVEAGAVLAAVRE-EPLVEDATLFDVYRGAPIPAGKK 759 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++A+ + + T D + RIV + + A LR Sbjct: 760 NLALAIRYRAGDRTLTDAEADAAHARIVGRLREALGAELRG 800 >gi|169831536|ref|YP_001717518.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Desulforudis audaxviator MP104C] gi|169638380|gb|ACA59886.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Desulforudis audaxviator MP104C] Length = 800 Score = 356 bits (914), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 256/823 (31%), Positives = 429/823 (52%), Gaps = 42/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVL-SVERNPDLD 59 M+ +++WLK+ +D V+ ++ D LT G+ V+++D A + + V +P+ D Sbjct: 1 MRVSINWLKEFVDIPVTSAELADRLTLAGVAVDRIDKPSAGVTGVVTGRVVEVRPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +D G + +Q+V GA N +VG + AP G+ + ++ + K RG+ES GMM Sbjct: 61 RLLIAAVDIGG-EILQIVTGAANFKVGDVVPVAPVGATL-AGDLAIRRAKFRGVESWGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL + DD I+ LP D PVG L L D I+++ LTPNR DC+ V G+A + Sbjct: 119 CAADELGIGDDHEGILILPSDTPVGVAAGPILGLDDEILELDLTPNRGDCLSVLGVARE- 177 Query: 179 VAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 VA LGK LK + P ++ D++D LC + + VR +P WM+ R Sbjct: 178 VATLLGKPLKRRKPAFPELDLQAQRMVRVDIEDPRLCSRYVARVLVDVRVGPSPLWMQTR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYD 296 L G+R IS +VD+TNYV L+ G P H FD + + + VRRA GE ++ LD E Sbjct: 238 LFTAGVRPISNIVDVTNYVMLELGQPQHAFDYDAVHNAHVIVRRARPGETLVTLDGNERS 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+PD ++I + +AG++GG + +T VL+E A ++P++I R+ + LG+ +++ Sbjct: 298 LAPDMLLITDPRTVIGVAGVMGGLDSEVTADTRRVLLESACFNPVSIRRTSRALGLRSEA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKRLS 415 RFE+GVD +G + + L+ + G A+ + Y PR ++ V+ + Sbjct: 358 SIRFEKGVDPEGCLKAADRALELMQIIGAGHAAAGAVDVYPDPYTPRTLIVRPERVEEIL 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-S 474 G+ VP + ILERL F+ +F V VPS R DV + DL+EE+ RI+G +I + Sbjct: 418 GLAVPAKTIRDILERLEFAPRETGGRFLVRVPSHRTDVFREIDLIEEVARIHGYHRIPDT 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGG--QR 529 P +T + + +SR R +L + + EV+ ++F ++ ++ L G +R Sbjct: 478 LPFGVTVPGVRTKAQVLESRLR---ELLVACGLTEVITYTFTNRKVFDRLRLPGTSPLRR 534 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTP---EGQ 584 + + NP++ D + MRT L P LL RN R + A+FE+ VY ++ P EG Sbjct: 535 TVPLRNPLNEDQTEMRTLLYPSLLDVLARNYQRRNTNAALFEIGRVYHPRDNAPLPEEGL 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--ES 642 + AA + + +G W K E +D F K L + + L++L F E Sbjct: 595 RLAAALMGRTPAG-------WRRKDEP----LDFFFLKG-VLESVAREIGLETLTFTAEQ 642 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 PS +HPGR+ ++ + E LG GE HP +L+ + L + E+ LD + K Sbjct: 643 DEPS-FHPGRTARLR-AGEANLGIIGELHPEVLEAYDLPPGVVVTEIDLDLVLAVDK--- 697 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 KT V L V+RDLA ++ + IPA ++ +I+ L+ ++ +FDV++G+ + EG Sbjct: 698 KTPTFVPLPRFPSVERDLALVIRKDIPAREVMALIRKAGGELLRELRLFDVYEGRQIREG 757 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +++ ++ + T D+++ ++ I+ + A LR+ Sbjct: 758 YRNLGFSLVFRAEDRTLTDEEVGRYLEAIIRTLEDTYGAQLRA 800 >gi|329767080|ref|ZP_08258608.1| phenylalanyl-tRNA synthetase [Gemella haemolysans M341] gi|328837805|gb|EGF87430.1| phenylalanyl-tRNA synthetase [Gemella haemolysans M341] Length = 797 Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 237/806 (29%), Positives = 408/806 (50%), Gaps = 35/806 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLK + + + + + + +T G+EVE V+ E +S + V S E++PD + Sbjct: 1 MLVSYNWLKQYTNVEDNANALAEKITRGGIEVEGVEYLAEEISGVVVGYVESKEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + +Q+VCGAPNV G + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCQVNIGEEENLQIVCGAPNVDAGQYVIVAKVGAKLP--GIKIKKAKLRGVESQGMI 118 Query: 119 CSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL LS + I + +G + + L L+D I+D+S+TPNR+D + +R Sbjct: 119 CSLGELGLSKSVVPKNYQEGIYVFETEQELGSDVVEVLGLNDYILDLSITPNRADALSMR 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+ +L A K+ ++ + E+ L++ + D C+ + VK V +P Sbjct: 179 GLTYELGALYNNKVDFKDVEKEENYEATSLQVSIESDS---CRNYVGQVVKNVEVKDSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ RL G+R I+ +VDITNYV L+ G P H FD + D + VR A GE + LD Sbjct: 236 WLQTRLMNSGIRPINNIVDITNYVLLEFGQPMHAFDKDLVGDKIVVRDAKEGEVLETLDG 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L ++VI R ++ G++GGK+ + T ++++E A ++P ++ R+ G+ Sbjct: 296 EERKLQTTDLVITDGTRAIALGGVMGGKNTEVSEKTKNIILESAYFNPTSVRRTSAAHGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +DS RFE+G+D L V LIL LC + + K + + S + Sbjct: 356 RSDSSARFEKGIDPNMQKAALARAVELILELCPNAVVESSVGIINKEKEKVVEITTSYIN 415 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 GI + E+ + ILE L F+V + V VP+ R D+ K DLVEE++RIYG D + Sbjct: 416 NYLGITLTTEEIVAILEGLSFTVEVSGENLVVKVPTRRPDISIKQDLVEEVIRIYGYDNL 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQREL 531 S LP K L+ Q R ++ V AS + +N+S +S+E++ + ++ Sbjct: 476 AS-TLPKFSKTTKGGLTYSQRMVRDLRGVYASLGFNDTINYSLVSEEEATQYTLENHHKV 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKY 586 +L P++ S +R SL+PGLL NV R D + E+ V+ +N P+ Y Sbjct: 535 RLLMPMTETHSTLRQSLVPGLLNTVQYNVARKQKDLKLLEIGRVFFGSGDDNIQPKETLY 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 ++A + +G + K + +D F AK V E + + ++ Sbjct: 595 LSAAL---------TGEERATKWLKESSALDFFAAKGYLEVVFERLGLEEKVTYKKSNLE 645 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR + E +G+ GE HP + D GL N FE+ LD + K + K ++ Sbjct: 646 GMHPGRFAEVYL-GEKRIGFIGEVHPQVADKLGL-NTTYVFEINLDDVISESKVKPKYEE 703 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 V + + RD+A +VD + N+I++V+ +LI +V +FD++ G L GKKS+ Sbjct: 704 V---TKYPEITRDIAMLVDVKDEYQNIYNVIESVNSKLITNVELFDLYAGVELLAGKKSL 760 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIV 791 A+ + + T D+++ + + ++ Sbjct: 761 ALTITYSDKQKTLTDEEVTAVHENVL 786 >gi|221066199|ref|ZP_03542304.1| phenylalanyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] gi|220711222|gb|EED66590.1| phenylalanyl-tRNA synthetase, beta subunit [Comamonas testosteroni KF-1] Length = 817 Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 248/848 (29%), Positives = 430/848 (50%), Gaps = 76/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL+++ + +++ +++ DTLT GLEVE++D PFT + V ++ ++PD Sbjct: 1 MQFPESWLREYCNPNLTTQQLADTLTMAGLEVEELD--PVAPPFTGIVVGEIKEAVQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D I ++D G + + +VCGAPN RVG+ +G PPG+ + + K+R Sbjct: 59 ADRLRICQVDVGGPELLNIVCGAPNARVGIRIPCATVGAELPPGA--DGKPFKIKIGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS KEL + +D++ ++E P DAP+G + +YL L D + + LTPN + C+ Sbjct: 117 GVQSFGMLCSAKELGIDEDASGLLEFPADAPLGQNVREYLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A +L A LK +S P ++ ++ ++ ++ + LC F+ V+ V V Sbjct: 177 VYGVARELSALTGTPLKA--LSFPAAAVALQDKLPVKIEATDLCGRFSGRIVRNVNTRVK 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +IS L VR GE + Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFELGRPSHIFDLDKISGGLNVRWGKEGETLKL 294 Query: 290 LDNQEYDLSPDNV----VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 L+ + D+ VIA D +++S+AGI+GG D+T ++ +E A W P +A Sbjct: 295 LNGNTIKI--DDFLKVGVIADDKQVESLAGIMGGDATAVSDDTRNIYIEAAFWFPKAVAG 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---- 401 ++ TD+ +RFERGVD + ++ I +L+L +CG + + + KP Sbjct: 353 RSRHFNFSTDAGHRFERGVDPEFTTEHIERITALVLEICGTPETQVGAMDD--QKPNMPA 410 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADL 459 + + + ++ G+ V + L L LG + + V+ P++R D+ + DL Sbjct: 411 SKAVQLRVARAAKVIGMAVTQQQCLDALNGLGLPATVASEGVISVTAPTFRFDINLEEDL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISK 518 +EE+ R+ G + + + PL + K L + R+ Y V+ LA E +N+SF+ + Sbjct: 471 IEEVARMIGYENLPTTK-PLAPISPK--LRAENERSPYAVRHELAGLGYQETINFSFVEE 527 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + G +++LNPI++ +S MR+SLL LL+ NVDR +FE+ V+ Sbjct: 528 KWEQELAGNHNAIKLLNPIASHLSVMRSSLLGSLLQVLKFNVDRKAQRVRVFELGRVFFK 587 Query: 579 D--------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 D T +G Q AG+ G+ + +L ++E + VD +D K D ++ Sbjct: 588 DESVADSDTTVKGFYQPMRVAGLAYGA-----ADQLQWGRAEAK---VDFYDVKGDVEAL 639 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + P + FE HPGR + + + G+ GE HP + L+ FE Sbjct: 640 LAPAKPV----FEPAEHPAMHPGRCARVLLDGKAI-GFVGELHPQWRQEWDLAQAPVMFE 694 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDD 746 + LD++ Q K ++ V+RD+A +V + + ++ ++ + ++ Sbjct: 695 LELDAVLARQVPVFKP-----VTKHQAVERDIAVVVKEAVTHAQVMEAVQQGVQGGILRS 749 Query: 747 VTVFDVFQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 +FDVF+ K SL + +KS+A+++ + + D +I M + +V Sbjct: 750 AVLFDVFRPKKLKAGEEAAPGSLAQDEKSLAVRLTLGSDTASLTDAEIEAAMQGTIAALV 809 Query: 796 KKTNAVLR 803 ++ A LR Sbjct: 810 ERVAARLR 817 >gi|225631065|ref|ZP_03787802.1| Phenylalanyl-tRNA synthetase beta chain [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591239|gb|EEH12384.1| Phenylalanyl-tRNA synthetase beta chain [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 548 Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 219/571 (38%), Positives = 317/571 (55%), Gaps = 30/571 (5%) Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 +++G+RSISA+VDITNY+ + P H +DA +I LTVR+A GEK L+ +EY L+ Sbjct: 1 ESIGMRSISAIVDITNYIMISFSRPMHAYDAKKIEGELTVRKANDGEKFAGLNGKEYLLN 60 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D VIA D I IAGIIGGK + C TTD+ +E A +DPI+I +S + LGI TD+ Y Sbjct: 61 KDISVIAGDKNIHGIAGIIGGKCSECTLETTDIFLESAWFDPISITKSSRQLGISTDASY 120 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RF R VD L +IL LCGG S + A ++ K+ F +V + + Sbjct: 121 RFARSVDPGFTFDGLNLAAKMILDLCGGETSSVVSAGSLDSADTKVSFDYQDVNKFGSVS 180 Query: 419 VPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 V ++ L IL +LGFS+ + + + V +PSWR DV ADL+EE+ RIYG D+IK EPL Sbjct: 181 VSPDEVLDILTKLGFSIDKKTEGNWNVQIPSWRPDVTIPADLIEEVTRIYGYDKIKEEPL 240 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P N+ S ++ ++ +R EV+ WSF+S+ + FG + I NP Sbjct: 241 P-------NNVEEVDSTYDNLRILMTNRGFHEVLTWSFMSESTAEKFGYSNKLFIIDNPF 293 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 + + MR S++P LL+ T N+ I+D AIFE+ +Y D K++ +GIR G++ Sbjct: 294 NNSFNIMRPSIMPNLLQVTADNIAHGISDLAIFEIGPIY--DGEARSKHVLSGIRTGNN- 350 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGII 656 R VD+FDAKAD ++ +E F V+ D+L E YHPG+SG + Sbjct: 351 -------LPRNHYNTDRKVDVFDAKADCIAALEFFNVNCDNLTIERAEKEHYHPGKSGTL 403 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSL 713 + V GYFGE HPNILD F + + GFEV L++I P+S+KK K Sbjct: 404 SFKNK-VAGYFGELHPNILDLFDIKQKVVGFEVILENIENLPVSRKKFIDYK-------Y 455 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 VKRD AFIV++ + G ++N++K LI +V VFDV+ G ++ K S+A+ V Sbjct: 456 QSVKRDFAFIVNKDVKVGNIINVVKKSSELITEVLVFDVYHGNNIESNKMSIALSVTFCS 515 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + +I+ IV V + T LR+ Sbjct: 516 PTHTLTEKEIQKESSAIVNLVCENTEGTLRT 546 >gi|88859785|ref|ZP_01134425.1| phenylalanyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] gi|88818802|gb|EAR28617.1| phenylalanyl-tRNA synthetase beta subunit [Pseudoalteromonas tunicata D2] Length = 795 Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 244/815 (29%), Positives = 424/815 (52%), Gaps = 33/815 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + E + + L+ GLEV+ +D A S + +V+ ++PD D Sbjct: 1 MKFSEKWLREWVNPAIETEALSEQLSMAGLEVDGLDPVAGAFSGVVVGEVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + + +VCGA N R GL A G+ +P + ++ K+RG S GM+ Sbjct: 61 KLRVTKVNIGQEELLDIVCGAANCRQGLKVAVATVGAVLP-GDFVIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL ++D+S I+ELP DAP+G + YL L D I+DV LT NRSDC+G++G+A ++ Sbjct: 120 CAFSELGITDNSDGILELPADAPIGQDIRQYLGLDDFIVDVDLTANRSDCLGIKGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWMRQR 237 L L I+ + +I + +L + C + +KG+ P WM +R Sbjct: 180 --GVLNSLDVTPITITPVAATIDDTLNIELVAPASCPRYLGRVIKGINLAATTPLWMVER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+R+I +VD+TNYV L+ G+P H FD ++I + VR A E+++ LD L Sbjct: 238 LRRSGVRAIDPVVDVTNYVLLELGHPMHAFDLAKIEGGIKVRNASQDEELVLLDGNTVKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D +VIA + ++AGI GG +G + T D+L+E A + P+ IA + G+ TD+ Sbjct: 298 HADTLVIADHQKPLAMAGIFGGLDSGVTETTQDILLESAFFSPLAIAGQARRYGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNSEVKRLS 415 +R+ERGVD Q + L+L + GG A + A + ++ P + +V S + ++ Sbjct: 358 HRYERGVDYQLQHDAMARATELLLEIVGGQAGPVVEALSQSHLPAEKSVVLRQSRLDKVI 417 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS- 474 G + E IL RLG +V+ ++ VPS+R D+ + DL+EE+ R++G + I + Sbjct: 418 GYAIAPETVTDILTRLGLTVVHTDGQWTAVVPSFRFDISIEEDLIEEVARVFGYNNIPNV 477 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 P ++ +L + ++ L +R E + +SF+ + L L + Sbjct: 478 APKASLKMTTHNEATLS---VKTIRNTLVTRGYQEAITYSFVDPKVQNLIHPQADALVLP 534 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAG 590 +PIS +MS MR SLLPGLL + N +R + +FE + + + G Q+ + G Sbjct: 535 HPISIEMSAMRVSLLPGLLSSLMYNQNRQQSRIRLFEHGLKFIKDEQAENGVAQQAVIGG 594 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + GS G W+ S R VD +D K D ++ S ++ A HP Sbjct: 595 VITGSV----MGDHWAVPS----RHVDFYDLKGDVEALFALTADKASFELKNEAIEGLHP 646 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 G+S I + + G+ G HP I +++ FE+ + + Q + K + Sbjct: 647 GQSAAIYRDGKKI-GFLGTLHPEIQAKLSINSQTFVFEIEMLGLEKRQLPQAK-----EI 700 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S +RD+A +V + ++ +I+ V ++L+ D+ +FDV++GK + KS+AI Sbjct: 701 SKFPANRRDIAIVVKDEVKLADILAVIEKVGANQLV-DLNLFDVYKGKGIESDHKSLAIA 759 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +Q T + DI++++D++V + ++ NA LR Sbjct: 760 LTLQNGDRTLEEQDIKLVVDQVVAVLAEEFNASLR 794 >gi|226311228|ref|YP_002771122.1| phenylalanyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] gi|226094176|dbj|BAH42618.1| phenylalanyl-tRNA synthetase beta chain [Brevibacillus brevis NBRC 100599] Length = 807 Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 260/834 (31%), Positives = 432/834 (51%), Gaps = 59/834 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 MK + WL +++D + + +++ + LT G+EV+ V++R E +S I V ++PD Sbjct: 1 MKVSYQWLSEYVDLSGTTPQELAEKLTRSGIEVDAVESRNEGVSGVVIGYVKERSKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G + A G+ +P + + K+RG+ES GM Sbjct: 61 DRLNVCVVDAGQGEDLQIVCGAANVDQGQKVLVALIGAKLP-GGLNIKRSKLRGVESQGM 119 Query: 118 MCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL L+D IM LP DA +G YL L D ++++ LTPNRSDC+ + Sbjct: 120 ICSAKELGLNDKLLAKDQQEGIMVLPADAEIGMDAVSYLGLDDYVLELGLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEI---NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A + VAA LGK E+ I + P+++K D + C + + Sbjct: 180 LGVAYE-VAAILGK--EVVFPQIELTENGGDNPIQVKIDATNE--CYQYHGRHFTNAKIA 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P WM+ RL A G+R I+ +VD+TNYV L+ G P H FDA++++D + VR A GEK+ Sbjct: 235 TSPQWMKNRLMAAGIRPINNVVDVTNYVLLEYGQPLHAFDATQVADRSIVVRLANEGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE L ++IA + +IAG++GG ++ T+++++E A + P + R+ Sbjct: 295 VTLDDQERALDAQTLLIADQTKGLAIAGVMGGANSEITGETSEIILEAAWFTPKTVRRTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVF 406 + LG+ T+ R+E+GVD + + +LI L G T S I A P + Sbjct: 355 RMLGMRTEGCVRWEKGVDQARVQEAGERAAALIQQLSGATVSKGISSAVVSEAAPAVVSV 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +++ + G D+ D I ERL F DK+ V+VP+ R D+ DLVEE+ R+ Sbjct: 415 TLAKINQHLGTDMSASDVSPIFERLQFPYEVAGDKWTVTVPTRRGDITLPEDLVEEVARL 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I + LP + + L+ +Q R ++ L M E ++++ + ++ G Sbjct: 475 YGYDNIPTS-LP-SGSTTQGQLTKEQQLRRTIRHHLIGTGMNEAISYALVHPDRVEAVAG 532 Query: 527 GQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT 580 +E + ++ P+S D S +RTSL+P LL+ N +R D AIFE+ V+ + +T Sbjct: 533 LHQEKVNPVALMMPMSEDHSVLRTSLIPSLLETVAYNKNRQNHDVAIFELGRVFLTKEET 592 Query: 581 ----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 PE + Y+A + +G+L + + VD F K S+ F L Sbjct: 593 LTQLPEERLYVAGAL---------TGQLLTQNWMGAKQPVDFFQTKGIVESL---FARLG 640 Query: 637 SLRFESGAP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 E A + HPGR+ + E LGY G+ HP + LS E Y+ Sbjct: 641 IQATEYKAVQDIAGMHPGRTAEVWV-GEKRLGYLGQVHPGTEKAYDLS------ETYVFQ 693 Query: 694 IPISQKKRTKTKKVVHLSSL---HPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 + ++ +V H + L V RDLA +VD+++ AG L I+ L++ VT+ Sbjct: 694 LDVAVLIDV-AAEVGHYNQLPKSPAVTRDLALVVDRNVAAGALEATIREAAGELLESVTL 752 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV+ G+ + + KKS+A ++ + + T +D++I+ + ++E + T A LR Sbjct: 753 FDVYMGERIAQDKKSMAFALVFRHAERTLQDEEIQQVTTAVIEALKNNTGAELR 806 >gi|224283266|ref|ZP_03646588.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium bifidum NCIMB 41171] gi|313140414|ref|ZP_07802607.1| phenylalanyl-tRNA synthetase beta chain protein [Bifidobacterium bifidum NCIMB 41171] gi|313132924|gb|EFR50541.1| phenylalanyl-tRNA synthetase beta chain protein [Bifidobacterium bifidum NCIMB 41171] Length = 867 Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 272/890 (30%), Positives = 415/890 (46%), Gaps = 116/890 (13%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP------ 56 + WLK+H++ +D++ E++ L +GLE E++ + P + V+ P Sbjct: 4 IDWLKEHVEVPSDLTYEQLAKDLVRVGLEEEEIHASQVTGPIVVGYVVDATPEPQKNGKT 63 Query: 57 ------DLDCAILRID-TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 D+ A +D GK ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGPAYNAVDENGKKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFRIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L PI++++ Sbjct: 123 YGHVSDGMCASERELGLGDSHEGIILLRDYGFTPQEYKALKPGDDAMHLLHLDQPILEIN 182 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKL----KEIN---ISCPLSSESIPLEIKFDLDDSSL 213 +TP+R RG+A + + K E+N + P + + +I+ +DD++ Sbjct: 183 ITPDRGYAFSYRGVAREYHHSTGAKFVDPVTELNKRAPAAPAAESGVSSDIEVIVDDNNP 242 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C + G N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 243 IHGVTGCDRYVARAIHGFDPTNHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 302 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG----RIQSIAGIIGGK 320 +D +I + VRRA GEK+ LD +E+DLS ++++I + DG RI IAG++GG Sbjct: 303 YDLDKIEGPIVVRRAAEGEKLTTLDGKEHDLSVEDLLITDSPDGKRGSRILGIAGVMGGL 362 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D ++IARS + I +++ RFERGVD Q + L+ Sbjct: 363 YGEVTADTKNILLEAAHFDSVSIARSARRHKIPSEASRRFERGVDTQLQPAAAQMAAELL 422 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S N T R I F +EV R++G+DV + IL +G V G + Sbjct: 423 TKFGNGEPSGHPTDVNTTMYRRPIPFKATEVARVAGLDVDVNRISDILTDVGCRVAGGGN 482 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F VS P+WR D+ E DLVEE+ R+ G D+I +P V+ L+ Q R R+V Sbjct: 483 GEFSVSAPTWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVKGTVGLTPDQRRQRWVA 541 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ E F +EI NP++ D +R +LP L Sbjct: 542 DTLAEYGMVESLSYPFVGDEDFKAFSYDPAVIKPVSVEIANPLAGDRPYLRRDVLPTLAT 601 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R + D ++E+ HVY D P G Q A Sbjct: 602 TVQRNLRRGLEDIRLYEIGHVYLWDPNAPAIPALPGGVRPSDEQLAALDAGLPDQPLHVA 661 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG- 643 G+ G+ SG G R WSD E R D A+ + LR + Sbjct: 662 GLLTGNAVDSGWLGDRRAVDWSDAVEAVRRVCDRLGARYE-------------LRQPAAQ 708 Query: 644 -APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV-------YLDSIP 695 P+ +HPGR+ I + E V+G GE HP + + GL FE+ LD P Sbjct: 709 DVPAQWHPGRAAQI-VAGEQVVGMVGELHPRVNEALGLPAHSAAFELNLTALFGTLDGKP 767 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQ 754 + K +++ PVK+DLAF VDQ + A L +++ ++ + +FDVF Sbjct: 768 VQAKP---------IATFPPVKQDLAFTVDQSVTAAQLEAVVREAAGANLESIELFDVFT 818 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ +GEGKKS+A V + T +D + IV+ + A LR+ Sbjct: 819 GEQVGEGKKSLAFAVTFRSPSKTLSAEDSEAIRKSIVDK-AEAIGAQLRA 867 >gi|116747877|ref|YP_844564.1| phenylalanyl-tRNA synthetase subunit beta [Syntrophobacter fumaroxidans MPOB] gi|116696941|gb|ABK16129.1| phenylalanyl-tRNA synthetase beta subunit [Syntrophobacter fumaroxidans MPOB] Length = 800 Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 249/823 (30%), Positives = 414/823 (50%), Gaps = 43/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +L WL+D+++T +S+E++ LT +GLE++ L +V VE +P D Sbjct: 1 MIVSLKWLRDYVETSLSVEELTHRLTMVGLEIDGCHPLHPCLGRVVTARVEKVEPHPRAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ + G H VVCGAPNV+ G + A PG+ + + + + IRG+ S GM+ Sbjct: 61 RLSVCEVSDG-HGRYSVVCGAPNVKAGQIVPLALPGAEL-ASGVKIGQATIRGVASLGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+KEL L +D++ I LP + PVG LS+ L+L D I+DV++TPNR DC+ + GIA ++ Sbjct: 119 CSQKELGLGEDASGIWPLPGEVPVGVPLSEALDLDDTILDVAVTPNRGDCLSIVGIAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A +L+ ++C + + +D C +A ++G+ +P W++ RL Sbjct: 179 AAISGVRLRYPAVACRETGPEVDSLASVRIDAPDGCPRYAARVIEGITVGPSPQWLKDRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL 297 +AVGLRSI+ +VD+TNY+ ++ G P H FD + + + VR A GE+ LD E L Sbjct: 239 EAVGLRSINNIVDVTNYILMELGQPLHAFDFDLLREQRIVVRYAREGERFTTLDGTERIL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D ++I ++AGI+GG + T VL+E A ++P I RS + LG+ T+S Sbjct: 299 FGDTLMICDGVGPVAVAGIMGGLDSEIGARTRRVLIESACFEPRCIRRSSRKLGLRTESS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-----IVFMNSEVK 412 YRFERGVD +G+I L L++ + GG D+ R Y PR +V V Sbjct: 359 YRFERGVDPEGVIRALDRAAQLMVEVGGG---DLATGRVDAY-PRPAEKPVLVLRTDRVN 414 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R G D+ + L + V EV P++R D+ + DL EEI R+ G D++ Sbjct: 415 RFLGTDLTPAEMAGALRSIEMQVEENGGGLEVIPPTFRPDITREVDLAEEIARLAGYDRV 474 Query: 473 KSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGG 527 P+T E + +L +K L E +N+SF+S E + + F G Sbjct: 475 -----PVTYPEVRMEAASLDRHLQARMDIKGYLEGAGFFEAINYSFVSMESLRKLKFPAG 529 Query: 528 QREL---EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 R L +I NP+S + + MRT+L+P LL+ N D D +FE+S V+ E Sbjct: 530 DRRLNPVQIRNPLSEEQAVMRTTLVPSLLQTARYNFDHKNDDLKLFELSKVFLPVEGAPL 589 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + + AGI G + L+ + VD DAK ++E + ++ +RF+ Sbjct: 590 PEEVHEVAGILAGKRSLN---LLYGGDDD-----VDYADAKGIVEGILE-LLHIEGVRFD 640 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S AP Y E+ LG G ++ F L P+ F++ + + + Sbjct: 641 SEAPPPYLDAACAATIMHGELNLGAVGRVAADVRAAFDLKKPVFVFDLDFERLFGIARPP 700 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + S V RD+A +VD+ +P + I++ + L++ + +FD+++ LG Sbjct: 701 AFFSSLPKFPS---VSRDMALVVDESVPVQGPFDFIRSQGEALLEHIDIFDIYRDPQLGA 757 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+ +++ + + D+++ L + +V V+ + +A LR Sbjct: 758 GRKSIGYRLVYRAADRSLTDEEVNRLHEGLVSKVLVEFDARLR 800 >gi|237736258|ref|ZP_04566739.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] gi|229421606|gb|EEO36653.1| phenylalanyl-tRNA synthetase subunit beta [Fusobacterium mortiferum ATCC 9817] Length = 795 Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 250/821 (30%), Positives = 436/821 (53%), Gaps = 43/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D ++++ + LT IG EVE +D + L I ++ ++P+ D Sbjct: 1 MLISLDWLKQYVDIKEDIKELDNALTMIGQEVEAIDIQGKGLDNVVIGHIVEYGKHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +++++ G+ + +Q+VCGAPN ++G V A G+ +P + + KIR +ES GM+ Sbjct: 61 KLTLVKVNIGEEEPLQIVCGAPNHKLGDKVVVAKIGAVLP-GDFKIKKSKIRDVESFGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS+ EL + +D I+ LP DAP+G Y L D I ++ +TPNR DC+ GIA ++ Sbjct: 120 CSQVELGIGEDGDGIIILPEDAPIGVEYRKYAGLDDVIFELEITPNRPDCLSHIGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K +++ + + K ++DD CK + ++ V +P W+++R+ Sbjct: 180 AAYYGRKVKYPSVTYTEAIDPTTKVAKVNIDDKDRCKRYMGRVIRNVTVGESPEWLKKRI 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDL 297 +A+GL+ I+ +VDITN+V + P H FD ++++ + VR A GEKI LD E +L Sbjct: 240 RAMGLKPINNVVDITNFVMFEYNQPMHAFDLDKVANGSIVVREAKMGEKITTLDGVEREL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +VIA D + +IAGIIGG T ++ +EVA + P NI ++G+ LGI TDS Sbjct: 300 TNGELVIADDEKAIAIAGIIGGIGTEITSETKNIFLEVAYFTPENIRKTGRRLGISTDSS 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 YR ERG+D++G+ + ++LI + G D I + I KP+K I ++ + Sbjct: 360 YRNERGIDIEGIPDASERAMALIAEIANGEILDGAIDKYIE-KPQKYEIPLSLEKLNKFI 418 Query: 416 GIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G ++ + +IL LG + D V P++R D+ AD+ EEI+R+YG + I Sbjct: 419 GKELSPDVVGKILSNLGLGIRTLSQDTLVVIPPTYRGDLTRTADIYEEIIRMYGFENI-- 476 Query: 475 EP-LPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 EP +P+ ++ + N+ L + K +L + EV+N+SFI K + +R Sbjct: 477 EPVMPIENIQAGKKAENIDLIDN----TKEILREIGLQEVINYSFIPKNVVDILNIKERV 532 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +EI NP+S DM+ +R +L+ +L N++R D EVS V+ +P + +A Sbjct: 533 IEIKNPLSEDMAILRPTLMWSVLSNIRDNINRNQFDLRFCEVSRVF---SPAEE--LANE 587 Query: 591 IRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + G+ G LW+ K E D + K ++E ++ + + E S + Sbjct: 588 DLRVCIGLAGRPERTLWNPKPEA----YDFYTIKGYVEKLME-YMGIARYKLERSTNSNF 642 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ-----KKRTK 703 HPGRS ++ + V+G FGE HP++ + + VY+ I +++ K K Sbjct: 643 HPGRSAELRIGND-VIGIFGEIHPDVQEKMEIKRE----RVYIAEIDLTKCVKYMKNSNK 697 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 +K+V V RDLA ++ + + G ++ +K V +I+ + +FDV++G + KK Sbjct: 698 YEKIVKYPE---VTRDLAIVLSKDVLVGNMIESLKKVSPIIEKIDIFDVYEGDKIEANKK 754 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 SVAI ++++ + T + +I +++I+ + K N +R Sbjct: 755 SVAISIVLRNKEKTLDEKEINSAIEKILATISKDYNGEIRQ 795 >gi|260438602|ref|ZP_05792418.1| phenylalanyl-tRNA synthetase, beta subunit [Butyrivibrio crossotus DSM 2876] gi|292809193|gb|EFF68398.1| phenylalanyl-tRNA synthetase, beta subunit [Butyrivibrio crossotus DSM 2876] Length = 806 Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 246/832 (29%), Positives = 421/832 (50%), Gaps = 62/832 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLDCAIL 63 LSWLKD++D D+ ++ L S G EVE+ ++ + +S + V E PD ++ Sbjct: 5 LSWLKDYVDIDIEPHELEKKLFSCGFEVEELIEVGKDISNVVVGYVKECEPIPDTHLSLC 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP---------ENNMIVNVRKIRGIES 114 ++D G+H QV CGA NV+ G A G+ + E M + K+RG ES Sbjct: 65 KVDAGEHGTFQVCCGADNVKAGGKYPLALVGATVYMTAKDHKTVEGVMTIKKGKLRGYES 124 Query: 115 TGMMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL +S D ++ LP DA G + L L D I D+++T NR DC Sbjct: 125 EGMLCSGVELGVSGNMYPGADYNGLLVLPEDAKTGSDVKPVLGLDDWIFDIAITANRPDC 184 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + GIA ++ A + K ++S S E + K D+ + LC + C V V+ Sbjct: 185 QSIIGIAREIAAVLDKEFKMPDLSYTPSGE-VKEGFKVDVKANDLCPRYIACYVSDVKIK 243 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 AP WM++RL G+ SIS +VDITNYV + G P H FD + + + + VRRA GEKI Sbjct: 244 EAPLWMKRRLALTGMDSISNIVDITNYVLKEFGQPMHAFDCNYLEGNEINVRRAADGEKI 303 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QEY+L+ +N+VI + ++AG++GG ++ D T+ V+ E A + NI ++ Sbjct: 304 VTLDSQEYELNSNNLVICDGVKAVALAGVMGGLNSEIRDTTSAVMFESAKFARDNIRKTS 363 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI--TYKPRKIV 405 + LG +D+ R+E+GVD + +K + LI L G S I N + +P+++ Sbjct: 364 RALGKQSDAGSRYEKGVDEYSTVNGMKRALHLIEELGCGKVSSTYIDVNTGNSIEPKEMK 423 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 V + GI+VP + +RI++ L F+ D+ + VP++R+D+E D+ EE++R Sbjct: 424 VSLKRVNDVLGIEVPENEVMRIMKNLNFAPSINGDELTIMVPAYREDMESYPDVAEEVIR 483 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF- 524 +YG + + +P +V ++ +Q + +K+ + + E +++SF S L Sbjct: 484 MYGYEHVIPTFMPDAKVT-MGGINSRQRKELKLKKAICATGAYECIHYSFFSPSDLDLLK 542 Query: 525 ----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 ++ + ++NPI+ D+S MRT+L+P +L A RN + + +FE++ ++ Sbjct: 543 LSEDAPERKAIRLINPINEDLSLMRTTLVPSMLNAISRNQKKGNLEGRLFEIAKIFIPKE 602 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 D P+ + + G+ + D F K A +V + F+ Sbjct: 603 LPLTDYPDERDTLCVGVFGQNE--------------------DFFTLKGIAETVADTFL- 641 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 LD +E S+ HP ++ +IK E + GY G+ +I D L N + Y+ I Sbjct: 642 LD-FEYEEAEKSFLHPYQTAVIKCEGEEI-GYLGKLAYDIADKLDLRN-----DAYVMQI 694 Query: 695 PISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDV 752 +++ + KK V L RDLA ++ + I + ++I I ++ +FDV Sbjct: 695 DLAKLAKWNDKKAVFKPLPKFAEESRDLALVMTKDITCKQVEDVIGQSCNYIKNIRLFDV 754 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G + + KKS+A V P + F D + +++I++N+ K+ + LRS Sbjct: 755 YEGAGIADDKKSMAFTVEFCPKDEAFESDSVDHFVNKILKNLKKELDIDLRS 806 >gi|311064538|ref|YP_003971263.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium bifidum PRL2010] gi|310866857|gb|ADP36226.1| PheT Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium bifidum PRL2010] Length = 869 Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 272/890 (30%), Positives = 413/890 (46%), Gaps = 116/890 (13%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP------ 56 + WLK+H++ +D++ E++ L +GLE E++ + P + V+ P Sbjct: 6 IDWLKEHVEVPSDLTYEQLAKDLVRVGLEEEEIHASQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 57 ------DLDCAILRID-TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 D+ A +D GK ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGPAYNAVDENGKKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFRIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L PI++++ Sbjct: 125 YGHVSDGMCASERELGLGDSHEGIILLRDYGFTPQEYKALKPGDDAMHLLHLDQPILEIN 184 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKL----KEINISCPLS---SESIPLEIKFDLDDSSL 213 +TP+R RG+A + + K E+N P + + +I+ +DD++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAKFVDPVTELNKRAPAAPAVESGVSSDIEVIVDDNNP 244 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C + G N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVTGCDRYVARAIHGFDPTNHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG----RIQSIAGIIGGK 320 +D +I + VRRA GEK+ LD +E+DLS ++++I + DG RI IAG++GG Sbjct: 305 YDLDKIEGPIVVRRAAEGEKLTTLDGKEHDLSVEDLLITDSPDGKRGSRILGIAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D ++IARS + I +++ RFERGVD Q + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDSVSIARSARRHKIPSEASRRFERGVDTQLQPAAAQMAAELL 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S N T R I F +EV R++G+DV + IL +G V G + Sbjct: 425 TKFGNGEPSGHPTDVNTTMYRRPIPFKATEVARVAGLDVDVNRISDILTDVGCRVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F VS P+WR D+ E DLVEE+ R+ G D+I +P V+ L+ Q R R+V Sbjct: 485 GEFSVSAPTWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVKGAVGLTPDQRRQRWVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLK 554 LA M E +++ F+ E F +EI NP++ D +R +LP L Sbjct: 544 DTLAEYGMFESLSYPFVGDEDFKAFSYDPAVIKPVSVEIANPLAGDRPYLRRDVLPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R + D ++E+ HVY D P G Q A Sbjct: 604 TVQRNLRRGLEDIRLYEIGHVYLWDPNAPAIPALPGGVRPSDEQLAALDAGLPDQPLHVA 663 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG- 643 G+ G+ SG G R WSD E R D A+ + LR + Sbjct: 664 GLLTGNAVDSGWLGDRRAIDWSDAVEAVRRVCDRLGARYE-------------LRQPAAQ 710 Query: 644 -APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV-------YLDSIP 695 P+ +HPGR+ I + E V+G GE HP + + GL FE+ LD P Sbjct: 711 DVPAQWHPGRAAQI-VAGEQVVGMVGELHPRVNEALGLPAHSAAFELNLTALFGTLDGKP 769 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQ 754 + K +++ PVK+DLAF VDQ + A L +++ ++ + +FDVF Sbjct: 770 VQAKP---------IATFPPVKQDLAFTVDQSVTAAQLEAVVREAAGANLESIELFDVFT 820 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ +GEGKKS+A V + T +D + IV+ + A LR+ Sbjct: 821 GEQVGEGKKSLAFAVTFRSPSKTLSAEDSEAIRKAIVDK-AEAIGAQLRA 869 >gi|229817952|ref|ZP_04448234.1| hypothetical protein BIFANG_03239 [Bifidobacterium angulatum DSM 20098] gi|229784556|gb|EEP20670.1| hypothetical protein BIFANG_03239 [Bifidobacterium angulatum DSM 20098] Length = 869 Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 265/889 (29%), Positives = 416/889 (46%), Gaps = 114/889 (12%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLK H++ D++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 6 IDWLKSHVEVPADLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKI 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E+ ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDEYNEVDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM----------ELPIDAPVGGRLSDYLELSDPIIDV 159 G S GM SE+EL L D+ I+ E P G L L P++++ Sbjct: 125 YGHISNGMCASERELGLGDNHDGIILLRNYGFTEEEYEALKP-GDDAMHLLHLDQPLLEI 183 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKE----INISCPLSSESIP---LEIKFDLDDSS 212 ++TP+R + RG+A + + K + +N P + ++P +I+ +DD++ Sbjct: 184 NITPDRGYTLSYRGVAREYHHSTGAKFTDPVIALNKKVPTPASALPDVKPDIEVQIDDNN 243 Query: 213 LCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 G C V+G PNWMR+RL G+RSIS VD TNYV +D G P H Sbjct: 244 PIHGVPGCDRYYARIVRGFDPAARTPNWMRRRLTRCGMRSISLAVDATNYVMMDLGQPMH 303 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS------DGRIQSIAGIIGG 319 +D +I + VRRA GEK++ LD +E++LS ++++I RI IAG++GG Sbjct: 304 AYDLDKIEGPIVVRRANEGEKLVTLDGKEHELSTEDLLITDSPNGNRSSRILGIAGVMGG 363 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 + T +VL+E A +D ++IARS + I +++ RFERGVD + L Sbjct: 364 LYGEVTAETKNVLLEAAHFDQVSIARSARRHKIPSEASRRFERGVDYALQPAAAQMCADL 423 Query: 380 ILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY 439 + GGT SD N T R I F SEV R++G+D + +IL +G +V G Sbjct: 424 LAEYGGGTPSDTPNDVNNTKHRRAIQFPTSEVARVAGLDTDVNTISKILTDIGCTVAGGG 483 Query: 440 D-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 + +F V+ P+WR D+ E DLVEE+ R+ G D+I +P V+ K L+ Q R R V Sbjct: 484 NGEFSVTAPTWRPDLNEPCDLVEEVARLVGYDEIPVR-VPAAPVKGKVGLTADQLRRRRV 542 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLL 553 LA ++E +++ F+ E FG + +EI NP+ D +R +LP L Sbjct: 543 ADELAEYGLVEALSYPFVGDEDYKAFGYDAEATKKVSVEIANPLYGDRPFLRRHVLPTLA 602 Query: 554 KATGRNVDRAIADFAIFEVSHVY--ENDTPE-----------------------GQKYMA 588 RN+ R + + +++E+ HVY D P Q Sbjct: 603 ATVQRNIRRGLENVSLYELGHVYLWNPDAPSIPALPGGVKPTEEQLKALDAGLPDQPDHV 662 Query: 589 AGIRKG---SSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 AGI G ++G G R WSD E R D A + L+ E+ Sbjct: 663 AGIFTGLAENTGWMGGKRPVDWSDAVEAVHRIADRLGAT----------IELNQPAAEN- 711 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV-------YLDSIPI 696 P+ +HPGR + + + G GE HP++ + G FE+ LD P+ Sbjct: 712 VPAQWHPGRFAYVDVDGKHI-GLVGELHPHVNEALGFPVHSSAFELNMTDLFATLDGKPV 770 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQG 755 K +S+ PVK+DLAF VD + A L +++ ++ + +FDVF G Sbjct: 771 QAKP---------ISTFPPVKQDLAFTVDGSVTAAQLEQVVREAAGEDLESIELFDVFTG 821 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +GEGKKS+A V+ + T +D + RIVE + A LR+ Sbjct: 822 DQVGEGKKSLAFAVVFRSPGKTLSAEDSEAIRARIVE-AAAQLGAQLRA 869 >gi|86605030|ref|YP_473793.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. JA-3-3Ab] gi|93140713|sp|Q2JXF6|SYFB_SYNJA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|86553572|gb|ABC98530.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-3-3Ab] Length = 825 Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 256/847 (30%), Positives = 424/847 (50%), Gaps = 65/847 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ +D ++S E++ + LT +G EVE++++R + + ++ ++L+ E +P+ D Sbjct: 1 MRISLKWLRELVDFELSPEELAEALTLVGFEVEEIEDRRSWAEGVVLGRILAAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +VCGA N R GLL A PG+ +P N+ + + RG+ S GM+ Sbjct: 61 KLRVCQVDLGSEQPATIVCGAANARAGLLVPVATPGTHLPAVNLTIAKAEKRGVLSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPID-----APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL L S I E P D P+G L L D ++D++ T NR+D + + G Sbjct: 121 CSLAELGLERASEGIHEFPPDLDLKAHPLGSDARPLLGLDDVVLDLTSTANRADALSMVG 180 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A L+ + PL ++ IP + D+ C ++ ++GV+ +P+W Sbjct: 181 IAREVAALTRNPLRLPPVQ-PLQAKPIP-NFNLRIADAKACPAYSGVLIEGVKVGPSPDW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL-------TVRRACSGEK 286 ++ RL A G+RSI+ +VD+TN + L+ G P H FD R+ V+ VR A +GE Sbjct: 239 LKHRLAAAGMRSINNVVDVTNLILLEWGQPLHAFDWDRLLQVMGKKKPTIEVRFAQAGET 298 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD Q L P++ +I + G+ ++AG++GG+ TT + +E AL+DP+ RS Sbjct: 299 LKTLDGQTRTLHPESHLIVAGGQPVALAGVMGGEETEVSSATTSIFLEAALFDPVVTRRS 358 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ G+ T++ R+ERGV+ + V LIL L GG+ + R + Sbjct: 359 ARSQGLRTEASARYERGVNFATLDLARDRAVQLILELAGGSVVGLTTFDQRPPLERTLKL 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGF------SVIGEYDK-------------FEVSVP 447 S + + G +V ED IL LGF +V E ++VSVP Sbjct: 419 RLSRLIDVLGEEVRPEDVEEILPALGFQLSRCQAVAPEAPPLPATETAGVAGCVWQVSVP 478 Query: 448 SWR-QDVEEKADLVEEILRIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASR 505 +R +DVE + DL+EE R+YG D+ SE LP QV +LS +++ TR ++ V+ Sbjct: 479 PYRLRDVEREIDLIEEFARLYGYDRF-SETLPTEPQVG---SLSARETLTRQIREVMRGI 534 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + EV + S E+ ++I NP+S + S +R +LLPGL++A N D+ Sbjct: 535 GLTEVYHISLCPAEEDSSL------VKIANPLSPEYSAVRKALLPGLVEAFRFNWDQGNG 588 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 FE+ HV+ P + G GI G G L + R +D F+AK Sbjct: 589 PLQAFEIGHVFAYAPPSSPEPYQEAEHLG--GILG-GDLNPNDWRHHSRPMDWFEAKGLL 645 Query: 626 LSVIEPFVSLDSLR---FESGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +S +E R E+ +P HPGR +GI + I G FG+ HP + L Sbjct: 646 VSALERLGFTSEFRPDPPEAQSP-LLHPGRQAGIWIEGSRI--GLFGQLHPRLCQEKDLP 702 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK---RDLAFIVDQHIPAGTLVNIIK 738 + GFEV LD + S +KR +V S P RD+AF + + +I+ Sbjct: 703 EEVYGFEVDLDPLLASLEKR----GLVQFSPFSPFPASDRDIAFFAPLELSVADIEKVIR 758 Query: 739 N-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L+ V +FD ++G+ + G++S+A +++ + T D ++ +++ + K Sbjct: 759 QAAGPLLQSVQLFDEYRGQGVPPGQRSLAFRLVYRAPDRTLTDAEVEAAQNQVRAQLEKH 818 Query: 798 TNAVLRS 804 LRS Sbjct: 819 FPVTLRS 825 >gi|126652674|ref|ZP_01724835.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. B14905] gi|126590523|gb|EAZ84641.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. B14905] Length = 805 Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 261/822 (31%), Positives = 427/822 (51%), Gaps = 45/822 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WLKD+++T D++ E + + +T G+EV+ V D A+ + V+S E++P+ Sbjct: 1 MLVSLEWLKDYVNTQDLAPELLAEKITRSGIEVDAVIDRANAMEKVVVGYVVSKEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + Q++CGAPNV G + A PG+ +P + + K+RG ES GM Sbjct: 61 DKLNICQVDVGEEEPQQIICGAPNVVAGQKVIVARPGAHLP-GGIKIKKAKLRGHESNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + S I LP DA VG L L D ++++ LTPNRSD + + Sbjct: 120 ICSLQELGIEGKLVPKAYSEGIYVLPEDAQVGTDALAILGLRDTVLELGLTPNRSDALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K +IS +SE +K ++D + VK V+ +P Sbjct: 180 LGVAYEVGAILSEEVKYPDISYQAASEKAEDLLKLRVEDMQANPMYVAKVVKNVKIGESP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA-SRISDVLTVRRACSGEKILAL 290 W++ RL A G+R + +VD+TNYV ++ G P H FD S + + VR+A GEKI L Sbjct: 240 MWLQNRLMAAGVRPHNNVVDVTNYVLMEYGQPLHAFDYDSLATGEIVVRKATEGEKITTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + +IAG++GG ++ D+TT V++E A +D + + ++ ++L Sbjct: 300 DDQERTLKASDLVITNGKEPVAIAGVMGGANSEVTDSTTTVVIESAYFDDLTVRQTSRHL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ +D+ RFE+GVD ++P + +L+ +L GG + C+ ++ P ++V Sbjct: 360 GLRSDASARFEKGVDPNRVLPAAERAATLLAALAGGEVLEGTCVVDDLDKTPARVVVSPD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G+ + +ED L ILERL F V + P+ RQD++ + D+VEEI R+YG Sbjct: 420 FINERLGMKIALEDMLSILERLKFGVEAANGLLIIDAPTRRQDIKIEEDIVEEIARLYGY 479 Query: 470 DQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D+I + P TQV +L+ Q+ R V+ + S + + V +S S S F Sbjct: 480 DEIPTTLPEGATQV---GSLTAYQANRRVVRNYMESAGLYQAVTYSLTSDVLSQRFALKA 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + +L P+S + S +R SL+P L++A NV R A++E+ V+ + EGQ + Sbjct: 537 EPVTRLLMPMSEERSTLRQSLVPHLIEAAAYNVARQADSVALYEIGSVFLGQSEEGQPFE 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + +G W D + + + VD F K VI + + FE Sbjct: 597 EEHLAVVLTG------KWLDHAWQGEKKAVDFFVLKGVIEGVIGKLGLGNRISFEKAQID 650 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI--PISQKKRTKT 704 HPGR+ I E V G G HP +G+ + E+ L ++ Q+ Sbjct: 651 GLHPGRTASIVLDGEQV-GIIGGLHPAEEKAWGVKDTYV-MEMNLVALLNATDQEAPLSY 708 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD--RLIDDVTVFDVFQGKSLGEGK 762 K V ++ RD+A I+D+ AG +V I NV +L+ D+ VFDV++G+ + +GK Sbjct: 709 KPVPRFPAM---SRDIALIMDRTTTAGEVVKAI-NVAGVKLLKDIRVFDVYEGEKMEQGK 764 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KSVA + T+ D + R L D E VV N VL++ Sbjct: 765 KSVAFSL-------TYFDPE-RTLTD---EEVVAAHNKVLKA 795 >gi|225181653|ref|ZP_03735093.1| phenylalanyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] gi|225167634|gb|EEG76445.1| phenylalanyl-tRNA synthetase, beta subunit [Dethiobacter alkaliphilus AHT 1] Length = 802 Score = 353 bits (906), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 246/818 (30%), Positives = 437/818 (53%), Gaps = 32/818 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ +WLKD +D + S +++ + LT+ G+EVE++ + A + + +V S++++P+ D Sbjct: 1 MRVPYTWLKDFIDLEHSAQELAEMLTNAGIEVEEITTLKPAFTNVVVAEVKSLDKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++++ G +E VV G N G A PG+ +P ++ + K+RGIES GM+ Sbjct: 61 KLFVVQVHDGT-EESTVVAGINNFSPGDKVPLAKPGARLP-GDLKIRRTKLRGIESNGML 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS +EL L + I+ L + PVG L + L L+DP++ + LTPNR+DC+G+ G+A Sbjct: 119 CSAEELGLELNPGVHGILVLDGETPVGVSLEEALYLNDPVLVLGLTPNRADCLGLLGVAH 178 Query: 177 DLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + VAA GK ++ + S P+ + P+ K ++D +LC +A + +R ++AP WM+ Sbjct: 179 E-VAALTGKAVQMPDTSLPVEKATQPVP-KISIEDENLCARYAGLVLSDIRVDMAPVWMQ 236 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQE 294 RL G+R IS +VDITNYV + G P H FD +++ + VR+A GE ++ LD+QE Sbjct: 237 VRLLQAGVRPISNIVDITNYVMWEWGQPLHAFDYHTLAEHSIVVRKAREGEVMVTLDDQE 296 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ + +VIA ++AG++GG T VL+E A ++P++I R+G++LG+ + Sbjct: 297 RELTSEMLVIADAKEPVALAGVMGGLATEVTAATDTVLLESAHFNPVSIRRTGRSLGMYS 356 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-PRKIVFMNSEVKR 413 +++ RFE+GVD+ G ++ LI L G + + + + P+KI ++ Sbjct: 357 EAQQRFEKGVDVNGCGQAIRRAARLIDLLNAGRVNGDVVDEYVAPQYPKKIRLRPDRARQ 416 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++ + I +R GF V E + V+ P+ R D++E+ DL+EE+ RI+G D+I Sbjct: 417 LIGLEISQLEMSTIFQRQGFKV-EEGTQLHVTAPTRRADLQEEVDLIEEVARIHGYDKIG 475 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-----GGGQ 528 + T + +R + +Q + V+ L S + EV+N+SF+S + S + Sbjct: 476 TTLPSGTMTQGRR--TEKQRAIKKVRETLISCGLAEVINYSFVSPQMSDKLRIPAESQLR 533 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + I NP+S + S MRT L GLL N +R + +FE+ VY P+ + Sbjct: 534 KAVTIANPLSEEQSVMRTLLTGGLLDTLSYNSNRNEQNIKVFELGAVY---LPKELPLVE 590 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 K GI +G + + VD FD K +V+ + +D ++ W Sbjct: 591 LPEEKTILGIAMTGEFPKEHWRHKPVSVDFFDVKGVVETVLS-VLGIDGVQVTEAELPWC 649 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKK 706 PG++ ++ E LG+ G HP + D + L P VYL + +++ K + + Sbjct: 650 QPGQTALLYLDNE-ELGWIGRVHPEVADEYDLEKP-----VYLAELDLAKLLDKASLITQ 703 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSV 765 L V RD+A +V + A +++++++ +++D+T+FD+++G + EG +S+ Sbjct: 704 YTSLPRYPAVLRDIAVVVPDSVSAAEVIDLMRDAGGSIVEDITLFDLYRGPQIPEGSRSL 763 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A V + T DD + +I E + + A LR Sbjct: 764 AFAVTYRDAARTLSDDVVSREHQKIEEALASRFGASLR 801 >gi|29833285|ref|NP_827919.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces avermitilis MA-4680] gi|41018321|sp|Q828C6|SYFB_STRAW RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29610407|dbj|BAC74454.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptomyces avermitilis MA-4680] Length = 833 Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 274/866 (31%), Positives = 428/866 (49%), Gaps = 95/866 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE+V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVERVEQLGADLKGPLAVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P N + RK Sbjct: 61 GFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GNFAIAARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP + VG + LEL D ++D+++TP+R Sbjct: 118 TYGRTSHGMICSGDELGMGDDGSGGIIVLPPEYEVGTDAIELLELVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RGIA + +A GL L++ +++ P ++ P++I L C F V Sbjct: 178 CLSLRGIARETAIAYGL-PLRDPALLDVPAP-NAFGHPVKISEPLG----CDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ G+RSIS VDITNYV L+ G P H +D SRI + VRRA Sbjct: 232 GLDPEARSPIWLQRRLQKAGMRSISLAVDITNYVMLELGQPLHAYDRSRIQGAIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD---NTTDVLVEVALWD 339 GEK+ LD + L +++VI D +AG++GG H DD TT+V++E A +D Sbjct: 292 QGEKLTTLDGTQRTLDAEDLVITDDRGPIGLAGVMGGAHTEIDDTEGTTTEVVIEAAHFD 351 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT- 398 PI++AR+ + + +++ RFERGVD + V L++ L GG+A D + IT Sbjct: 352 PISVARTARRHKLASEASKRFERGVDPLAASAAAQRTVDLLVLLAGGSA-DAGVTEVITP 410 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 P I + R++G++ E +R L+ +G V G+ D+ V+VPSWR D+ + D Sbjct: 411 SAPHTITIPANHPDRVAGVEYGRETVVRRLQEVGCDVYGQ-DELLVTVPSWRPDLTDPND 469 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EE++R+ G + + P L + R L+ +Q R V R LA +E N+ FI + Sbjct: 470 LAEEVIRLEGYENL---PSTLPKPPAGRGLTERQRLHRRVGRALAGAGYVEAPNYPFIGE 526 Query: 519 EQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 FG +R ++++NP+S + +RT+LLPGLL A RN R D A+FE Sbjct: 527 HVFDQFGLAADDPKRRVVKLVNPLSEEEPALRTTLLPGLLGALRRNDGRGSHDLALFETG 586 Query: 574 HVYENDT--------------------------PEGQKYMA---AGIRKGSSGIEGSGRL 604 V+ PE ++ A AG R+ +G G GR Sbjct: 587 LVFHPRAEQRIAVRLPVDRRPTDEEIASLTAALPEQPRHAAVVLAGARE-QAGWWGKGRP 645 Query: 605 --WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS---GIIKTS 659 W+D E A+ A + L +G +HPGR ++ Sbjct: 646 ADWADAVEA---------ARTLARE------AGTELLVRAGQYGPWHPGRCAELAVVLDG 690 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 E V+GY GE HP +L GL E+ LD++ ++ K +S+ +D Sbjct: 691 EEKVIGYAGELHPGVLKTLGLPARTSAMELNLDAL---EQASAGVVKGPRISTFPVATQD 747 Query: 720 LAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +VD+ +P A + + L++ + +FDV++ + LG GKKS+A + + T Sbjct: 748 VALVVDKTVPHADVEAALREGAGELLESIRLFDVYESEQLGAGKKSLAYALRFRAADRTL 807 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 ++ D V ++T A LRS Sbjct: 808 TVEEASTARDAAVALAAERTGAALRS 833 >gi|225378184|ref|ZP_03755405.1| hypothetical protein ROSEINA2194_03844 [Roseburia inulinivorans DSM 16841] gi|225209990|gb|EEG92344.1| hypothetical protein ROSEINA2194_03844 [Roseburia inulinivorans DSM 16841] Length = 805 Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 255/831 (30%), Positives = 424/831 (51%), Gaps = 61/831 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLDCAIL 63 LSWLKD++D DV+ +++ + L S G EVE+ ++ + +S + V + E PD ++ Sbjct: 5 LSWLKDYVDIDVTPKELEEKLFSCGFEVEELIEVGKDVSGVVVGLVETCEPIPDTHLSLC 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIP-ENNMIVNVRKIRGIES 114 +++ G+H Q+ CGA NV G L+G V+A + E M + K+RG ES Sbjct: 65 QVNAGEHGTFQICCGADNVHAGGKFPLALVGATVYATAKDHVTIEGVMTIKKGKLRGYES 124 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL L++D ++ LP DA VG + L + D I D+++T NR DC Sbjct: 125 FGMLCSGTELGLNEDLYPGAGYNGLLVLPEDARVGADVKPILGMDDWIFDIAITANRPDC 184 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + GIA + VAA LGK KE + + + + + LC + V V Sbjct: 185 QSIYGIARE-VAAVLGKECKEPALD--FTETDVKKDFHVTVSAKDLCPRYIAHYVHDVEI 241 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P WMR+RL VG+ IS +VDITNYV + G P H FD + + D + VRRA GEK Sbjct: 242 KESPAWMRRRLALVGIGGISNIVDITNYVLKELGQPMHAFDYAYLEGDEINVRRADDGEK 301 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD +E++L+ N+VI + ++AGI+GG ++ D T +V+ E A + NI +S Sbjct: 302 ITTLDEKEFELNNSNLVICDGKKPVALAGIMGGLNSEIQDTTKEVMFEAAKFARDNIRKS 361 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS-DICIARNITYKPRKI 404 + LG +DS + +GV + +K + L+ L CG +S I ++ + +P+++ Sbjct: 362 SRALGQSSDSSAMYAKGVYEYTTVMAMKRALHLVEELGCGKVSSTHIEVSTGNSIEPKEM 421 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 V + GI+VP D +RIL L F+ + D+ + +P++R+D++ D+ EE++ Sbjct: 422 KVSVKRVNGVLGIEVPDADIVRILTALNFAPVINGDELTLQIPAYREDMDSYPDVAEEVI 481 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG + + +P +V L+L+Q +KR L + E +++SF S L Sbjct: 482 RMYGYEHVIPTFMPTAKV-TLGGLNLKQKTELKIKRALCAAGAYEGIHYSFFSPSDLDLL 540 Query: 525 -----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 + + ++NPI+ D+S MRT+L P ++ A RN +AI + IFE+ +V+ Sbjct: 541 RLPEDAKERHAIRLINPINIDLSLMRTTLAPQMIHAMARNQKKAILEGRIFELGNVFIPK 600 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + P+ ++ + G L+ +K E + ADAL++ Sbjct: 601 DLPLTEYPDERETLCVG-------------LFGEK-ESFYTLKGFAETVADALNI----- 641 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + +E+ ++ HP ++ I E V GY G+ I+D + P E+ L S Sbjct: 642 ---TFTYEAAENTFLHPYQTAEIFCEGEKV-GYLGKVSYEIMDELDMRVPAYVMEIDLAS 697 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVF 753 + +K K + L KRD AF+VD++I + N IK + DVT+FDV+ Sbjct: 698 L---KKWYGKEQIFTPLPKYAEEKRDFAFVVDKNITCAQIENGIKEACDYVTDVTLFDVY 754 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G LG KKS+A V+ P + F + + + +I++N+ K + LR+ Sbjct: 755 EGIQLGPDKKSMAFSVVFTPADEEFTTERVEGFVKKILKNLEKTLDIRLRA 805 >gi|218670762|ref|ZP_03520433.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli GR56] Length = 304 Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 170/304 (55%), Positives = 225/304 (74%) Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L P+NVVIA + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+ Sbjct: 1 LGPNNVVIADEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDA 60 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD + M+P L+ L+L LCGGTA+ + +++P+ + F SEVKRL+G Sbjct: 61 RYRFERGVDPEYMVPGLERTTELVLELCGGTAARAEVVGYKSHEPKVVDFPYSEVKRLTG 120 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ++V E+S IL RLGF+V G ++ VSVPSWR DV+ KADLVEE++RI+GVD+IK P Sbjct: 121 LEVSTEESNAILARLGFTVSGSGERVSVSVPSWRPDVDGKADLVEEVMRIHGVDKIKPAP 180 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + R L+ Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L++ NP Sbjct: 181 LESHAAVNGRILTTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALKLANP 240 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+A+MS+MR SLLPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ Sbjct: 241 IAAEMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTA 300 Query: 597 GIEG 600 + G Sbjct: 301 SLTG 304 >gi|319938900|ref|ZP_08013264.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus anginosus 1_2_62CV] gi|319811950|gb|EFW08216.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus anginosus 1_2_62CV] Length = 801 Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 251/812 (30%), Positives = 420/812 (51%), Gaps = 46/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D V E++ + +++ G+EVE V + + LS + +V+S E P+ Sbjct: 1 MLVSYKWLKELVDVTVLSEELAEKMSTTGIEVEGVSSPAKGLSKIVVGEVISCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEALRQIVCGAPNVRTGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFSDGIQILPEEAVPGDSVFPYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + L + + D + +A ++ V + Sbjct: 180 VAYE-VAAIYDKSVHFKDFPLLETQEQAGEQLSVAIETDKAPF---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR AC+GEK++ Sbjct: 236 PQWLQNLLMNAGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEDNQIVVREACAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD++E +L ++VIA + ++AG++GG ++ V++E A++D +I ++ Sbjct: 296 LDDEERELETSDLVIAVADKPVALAGVMGGAATEISSQSSRVVLEAAVFDGTSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G++L + L S+I L G T + I A + ++V Sbjct: 356 LNLRSESSSRFEKGINLATVTEALDAAASMIADLAGATVQAGIVSAGQVDTSDVEVVSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S+V R+ G ++ D + RLGF + G+ +KF VSVP R D+ +ADL EEI RIYG Sbjct: 416 SDVNRVLGTELTYTDIEDVFRRLGFGLTGDAEKFTVSVPRRRWDIHIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P L + + L+ Q R V+ V + EV+ ++ + E++V F Sbjct: 476 YDKL---PATLPKGDGTAGQLTETQKLRRKVRTVAEGAGLTEVITYALTTPEKAVQFSTN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T Q+ Sbjct: 533 PSNLTELMWPMTVDRSVLRQNMVAGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPQEE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFE---S 642 + I + + G L ++K + VD F AK ++E L+ E + Sbjct: 592 LPTEINSFAYALTG---LVTEKDFQTPAVPVDFFYAKG----ILEALFDRLGLKVEYTAT 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 A + HPGR+ I ++V G+ G+ HP + + E Y+ I ++ ++ Sbjct: 645 QALAGMHPGRTATISLDGQVV-GFVGQVHPVTAKDYNIP------ETYVAEINLTAIEQV 697 Query: 703 --KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 K V ++ V RD+A ++ I +V I+ V RL D+ +FDVF G+ L Sbjct: 698 IQPAKPFVEITKFPAVTRDIALLLKAEISHKEVVEAIEAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 G G KS+A + Q +DT D+++ M++I Sbjct: 757 GLGMKSMAYTLTFQNPEDTLEDEEVARYMEKI 788 >gi|115375487|ref|ZP_01462747.1| phenylalanyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] gi|115367530|gb|EAU66505.1| phenylalanyl-tRNA synthetase, beta subunit [Stigmatella aurantiaca DW4/3-1] Length = 769 Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 249/781 (31%), Positives = 404/781 (51%), Gaps = 32/781 (4%) Query: 39 EALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI 97 EAL + ++ ++P+ D ++ ++D G Q +QVVCGA N +VG A G+ + Sbjct: 6 EALQGVVVAQIRESVQHPNADKLSVTQVDAGGPQLLQVVCGAKNFKVGDKVPLATVGTKL 65 Query: 98 PENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII 157 P N + + +RG++S GM+CS KEL LS++S+ ++ LP G ++ L L D ++ Sbjct: 66 P-NGVEIKQAALRGVDSHGMLCSSKELGLSEESSGLLILPAGLKPGLPIASALGLDDVVL 124 Query: 158 DVSLTPNRSDCIGVRGIALDL-VAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 +V++TPNR D + G+A ++ V G+ + E +S + + ++K ++D C Sbjct: 125 EVNVTPNRPDALSHLGVAREVGVVTGVAFRPPEPKLS--EAGGATADKVKVRIEDPVRCP 182 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-D 274 +A V+ V +P W++ RLKA G+R+I+ +VD+TNYV+L+ G P H FD +++ Sbjct: 183 RYAARVVENVTIQPSPQWLQDRLKACGVRAINNVVDVTNYVNLEYGQPLHAFDLDKVAGQ 242 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 + +R A GEKI LD +E L D++ I R Q+IAG++GG + T +++E Sbjct: 243 EIVIRCARPGEKIRTLDGKERTLDADDLAICDRDRAQAIAGVMGGADSEVTGGTKRIVLE 302 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA 394 A + ++ RS K G+ T++ +RFERG DL + P + LI L GGT + + Sbjct: 303 SANFLASSVRRSSKRHGLHTEASHRFERGADLDAVGPAIDRAAQLIAELSGGTVASGRVD 362 Query: 395 RNITYKP-RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQD 452 KP R++ + V+++ G VP + RIL LGF + + + VP R D Sbjct: 363 VYPGQKPARRVTLRFARVEKVLGTAVPEGECRRILGALGFRGVEDGSAQATFEVPRARVD 422 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 VE + DL+EEI R++G D I + LP V + Q R +++ L+ + EVVN Sbjct: 423 VEREEDLLEEIARVFGYDNIPAR-LP-RGVAELAPEPPQAEAERRLRQALSGAGLNEVVN 480 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +SF++ + GG + ++NP+S + S MRTSLLPGLL+ R+V + AI E Sbjct: 481 YSFVAPRNLEVLGGKDAPVVLVNPLSVEQSVMRTSLLPGLLENLSRSVRHQVERVAIHET 540 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEG------SGRLWSDKSEERCRFVDLFDAKADAL 626 Y D PEG + R+ S + G SGR W+ K +D +DAK Sbjct: 541 GRAYVRD-PEGGQGQRPATREVSR-VAGLVWGLRSGRTWTQKDAR----MDFYDAKGAVE 594 Query: 627 SVIEPFVSLDSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +V+ + + RFE AP+W HP + + VLG+ GE HP + L + Sbjct: 595 AVLHGLRVVGA-RFEPAEAPAW-HPRACAQVLLADGTVLGHVGELHPRVTKALELPQGVF 652 Query: 686 GFEVYLDSIPISQKKRTKTKKVVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRL 743 FE LD+ P+ + H L V RDLA +V + + +I V L Sbjct: 653 AFE--LDTEPLYAA--AQLAPAYHALPRFPAVLRDLAVVVPVELRNDEVRRVILEVGGTL 708 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++D +FDV+ GK + EGKK++A + + + T D ++ RI+ V ++ LR Sbjct: 709 VEDALIFDVYTGKPIPEGKKNLAYAIRYRSQERTLTDGEVGEAHQRIISEVNQRLGGALR 768 Query: 804 S 804 + Sbjct: 769 A 769 >gi|291456414|ref|ZP_06595804.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium breve DSM 20213] gi|291381691|gb|EFE89209.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium breve DSM 20213] Length = 869 Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 270/871 (30%), Positives = 413/871 (47%), Gaps = 103/871 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKV 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDENGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLREYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAIALNEKAPEPADYQPGTPVDIDIEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VKG N P+WMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARVVKGFDPNAHTPSWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSTEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTELQPAAAQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ + T +P+ I F SEV R++G+DV I IL +G V G + Sbjct: 425 AKYGNGEPSEHPNDVDNTPRPKVIHFKASEVARVAGLDVDINRISDILTDIGCVVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q+R R V Sbjct: 485 GEFSVTAPSWRPDLGEPCDLVEEIARLVGYDQIPVT-VPPAPVEGLVGLTPDQTRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEYGMVEALSYPFVGDDDYRAFGFDPEATKKVSVEIANPLYGDRPYLRRDILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R I + +++E+ HVY D P G Q A Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPDQPDHVA 663 Query: 590 GIRKG---SSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GI G G G R WSD E R D AK + LD E Sbjct: 664 GILTGLAEDDGWLGGKRPVDWSDAVEAVHRLADRIGAK----------IVLDQPAAED-V 712 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P+ +HPGR+ + ++ G+ GE HP + + G FE+ L ++ T T Sbjct: 713 PAQWHPGRAARVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTAL-----FGTLT 766 Query: 705 KKVVH---LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGE 760 K V +SS PVK+DLAF VD + A L +I+ ++ + +FDVF G+ +GE Sbjct: 767 GKPVQAKPISSFPPVKQDLAFTVDASVTADQLEAVIREAAGANLESIELFDVFTGEQVGE 826 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 GKKS+A V+ + T DD + IV Sbjct: 827 GKKSLAYAVVFRSPDKTLSADDSDAIRQAIV 857 >gi|120404291|ref|YP_954120.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium vanbaalenii PYR-1] gi|119957109|gb|ABM14114.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium vanbaalenii PYR-1] Length = 828 Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 261/856 (30%), Positives = 430/856 (50%), Gaps = 80/856 (9%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL++ + DVS E++ TL IG EVE++ ++ P TI +V+ +E Sbjct: 1 MRLPYSWLRELVAAGAPGWDVSAEELEQTLIRIGHEVEEIIPAGPVTGPLTIGRVVEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++D G+ + +VCGA N VG L V A PG +P + + R G Sbjct: 61 LTEFKKPIRACKVDVGESEPRDIVCGATNFVVGDLVVVALPGVVLP-GDFTIATRTTYGR 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL L D + I+ LP A G +D L L D + D+++TP+R C+ V Sbjct: 120 TSDGMICSVSELNLGSDHSGILVLPPGTAEPGDEAADVLGLDDVVFDLAITPDRGYCLSV 179 Query: 172 RGIALDLV-AAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNN 228 RG+A ++ A L + +++ P E++P+ + D + + F + V G+ Sbjct: 180 RGMAREIANAYDLEFVDPADVAPLPADGEALPVTV----DPGTGVQRFGLRPVTGIDPKA 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 V+P W+++RL G+R+IS VD+TNYV L+ G+P H D S I+ VR A GEK++ Sbjct: 236 VSPWWIQRRLLLSGIRAISPAVDVTNYVMLELGHPMHAHDRSLITGGFRVRFAEPGEKVV 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L P +V+I D +I G++G D TTDVL+E A+WDP ++R+ + Sbjct: 296 TLDGVERTLDPADVLIVDDVATAAIGGVMGAGTTEVSDATTDVLLEAAVWDPAAVSRTQR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L + +++ R+ER VD + L +L+ + GGT + P + + Sbjct: 356 RLRLYSEAGRRYERTVDPAVSVAALDRCATLLADIAGGTVEPTLT--DWRGDPPRADWAQ 413 Query: 409 SEVK-------RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 V R +G++ P + L ++G SV+ + + PSWR D+ + ADLVE Sbjct: 414 PPVSMPVDLPDRTAGVEYPEGAVRKRLTQIGASVVVDGGTVTATPPSWRPDLRQPADLVE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK--- 518 E++R+ G+D I S L R L+ Q R R V + LA +E++ F+ Sbjct: 474 EVMRLEGLDVIPSV---LPAAPAGRGLTAGQKRRRAVGKSLALSGFVEILPTPFLPAGIF 530 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 +Q L R ++LNP+ +D ++ T+LLPGLL+A RNV R D A+F ++ V Sbjct: 531 DQWGLDADDPRRNTTQVLNPLESDRPHLATTLLPGLLEALTRNVSRGAVDVALFAIAQVV 590 Query: 577 E------------NDT--------------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 E ND P +++AA + +G+ W Sbjct: 591 EPTAETGAVERIPNDRRPTDDEIAALDASLPRQPEHVAAVL----TGLREPAGPWG---- 642 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGE 669 R R V+ DA +A+ VI ++ +LR P +HPGR I ++V+G+ G+ Sbjct: 643 -RGRPVEAADAF-EAVRVIGRAAGIEFTLRAGRYLP--WHPGRCAEI-VVGDVVVGHAGQ 697 Query: 670 FHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP 729 HP +++ GL C E+ LD++P++++ +S V +D+A IVD+ I Sbjct: 698 LHPAVVERSGLPKGTCAVELDLDAVPLTERLPAP-----GVSPFPAVFQDVALIVDEDIE 752 Query: 730 AGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 A ++V+ +++ L++DV +FDV+ G +G+G+KS+A+ + + T +D+ D Sbjct: 753 AQSVVDAVRDGAGELLEDVRIFDVYTGPQIGDGRKSLALALRFRAPDRTLTEDEASAARD 812 Query: 789 RIVENVVKKTNAVLRS 804 V ++ +AV RS Sbjct: 813 AAVREAARRVHAVQRS 828 >gi|89893018|ref|YP_516505.1| hypothetical protein DSY0272 [Desulfitobacterium hafniense Y51] gi|89332466|dbj|BAE82061.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 801 Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 243/828 (29%), Positives = 422/828 (50%), Gaps = 53/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +L WL++++D + E + ++LT G+EV V+ + L + ++ +E +P+ D Sbjct: 1 MKVSLEWLREYVDIAQTAEDLAESLTRGGIEVGGVEYLNQGLEAVVVGEITRMEHHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++ G + +V GA N+ VG A PG+ +P N + + V K+RG+ES+GM+ Sbjct: 61 KLWICEVNLGD-RSTTIVTGAQNLLVGDRIPVALPGTTLP-NGVHIEVSKLRGVESSGML 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L I+ L + P+G + L D ++D+ L PNR DC+G+ Sbjct: 119 CSTEELHLDSGLGDPRSEGGILILEKETPLGATMDTVLGEGDCVLDLELYPNRPDCLGMV 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSES-----IPLEIKFD--LDDSSLCKGFAMCCVKGV 225 +A + VA+ G+ + P +E P + K LDD LC+ +A V+ V Sbjct: 179 NVARE-VASLTGE----ALHLPAWAEGSQGPDYPGDPKARIVLDDPELCQRYAGLVVEDV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 +P WM++RLKA G+R IS +VDITNY+ L+ G P H FD I+ + VRRA +GE Sbjct: 234 NIEPSPEWMQKRLKAAGVRPISNIVDITNYIMLEMGQPLHAFDRDAIAGAVHVRRARAGE 293 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K++ LD E +L P+ ++IA D + +AG++GG ++ D+T + VE A + ++I R Sbjct: 294 KLVTLDGIERELDPEMLLIADDEKALGLAGVMGGLNSEITDSTKRIFVESAHFSSVSIRR 353 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + LG+ +++ RFE+GV+ G+ L + L++ L G KP + Sbjct: 354 TSRRLGLRSEASNRFEKGVNPHGVAATLGRVAELVIQLGAGKPVGFVEQAGQLPKPAAVS 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + L G + E+ +L+RL F + +EV +P++R D+ + DL+EE+ R Sbjct: 414 LTVEKTNSLLGTVLTEEEITGVLKRLRFPYQEKDRGYEVQIPTYRSDITIEEDLIEEVAR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + G D+I + Q + +R + +Q R ++ +L + EV+ +SF + FG Sbjct: 474 LTGYDRIPTTLPQGDQTQGRR--TPEQEFKRTLRHLLVGLGLNEVMTYSFTRPDADRQFG 531 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT----- 580 + + +LNP+ ++S MRT+LLP +++ RN+ R D +FE+ +Y++ Sbjct: 532 DMDQAIPLLNPLREELSVMRTALLPSIMEIAARNISRRNLDIRLFEMGSIYKSKERPLVK 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P+ + ++A I SS R W E D + K ++E L Sbjct: 592 LPQEELHLAGVIWGKSS------RHWLTPVTE----YDFYTVKG----ILEEVAREFGLE 637 Query: 640 FESGAPS---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 F+ P+ HPGRS I + E + G GE HP + + L + FE+ + + Sbjct: 638 FDYKLPNNQELTHPGRSADIYLNGEKI-GLMGEIHPALGKEWELERALI-FELAVTPL-- 693 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 + +T + + ++RDLA +V + A ++ IK + L+ V +FDV+ G Sbjct: 694 -MEAGNRTIRAFSIPKFPAMQRDLAVVVPLEVSAQDVMKRIKELGGTLLVQVNIFDVYTG 752 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 K + E +KS+A + Q L T +D+++ L +++E + K+ A R Sbjct: 753 KPIPEDRKSLAFALKYQALDRTLKDEEVNALNQQVLEGIEKEFGAAWR 800 >gi|284048248|ref|YP_003398587.1| phenylalanyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] gi|283952469|gb|ADB47272.1| phenylalanyl-tRNA synthetase, beta subunit [Acidaminococcus fermentans DSM 20731] Length = 812 Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 260/828 (31%), Positives = 420/828 (50%), Gaps = 42/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +++WLK ++D V+ E + D LT +GLEVE+V + E L KV +ER+P+ D Sbjct: 1 MLASINWLKQYVDIPVTPEVLADKLTRVGLEVEQVIHLGEGLEGVITGKVAQIERHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q++ GA NV G + A GS +P M + K+RG++S GM+ Sbjct: 61 HLWICQMDLGQGELVQILTGAQNVHQGDMVPVAVVGSHLP-GGMTLKAAKMRGLDSNGML 119 Query: 119 CSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL +L + I LP + P+G + + L L D ++D+ LT NRSDC + Sbjct: 120 CSAGELGIDAKLLLPEQRDGIFILPENTPIGVDVKELLGLDDVVLDIDLTANRSDCFNML 179 Query: 173 GIALDLVAAGLG------KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A + AA LG KL + + +++ +EI+ LC FAM VK ++ Sbjct: 180 GLARE-TAAVLGQSLRLPKLATRDEAAGSAADCAKVEIQC----KDLCTRFAMRMVKDIQ 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM++ L+AV +R I+ +VD+TNYV ++ G P H +D ++D VRRA GE Sbjct: 235 VTESPEWMQKLLRAVNIRPINNVVDVTNYVMMELGQPMHAYDYDTVADHTWIVRRAQEGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD Q+ DL+P+ +VIA + + G++GG T +V++E A + +I Sbjct: 295 TLVTLDGQKRDLNPNMIVIADPEKAIGLGGVMGGLATEVTGKTVNVMLESATFYGPSIRH 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI--LSLCGGTASDICIARNITYKPRK 403 + K+LG+ +++ RFERGVD L V L+ + C A + + +P K Sbjct: 355 TSKDLGLRSEASQRFERGVDTIRDHDALNRAVHLLEEMGACKAVAG-VVEDYPVPQEPVK 413 Query: 404 IVFMNSEVKRLSGIDVPIEDSLR-ILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVE 461 I + ++R G + + +R ILE L F V + D + V+VP+WR D ADL E Sbjct: 414 IKALPEALRRRIGTEEITDAEMRSILEGLRFDVEPQADGSWLVTVPTWRNDCTCDADLSE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+ R+YG D+I S LP + ++ + + V+ LA + EV+ ++FI+ Sbjct: 474 EVARMYGYDKIPST-LPQLDMARGGQAPIEDVKDK-VRNCLADAGLDEVMTYTFINAGDF 531 Query: 522 VLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 G G ++ ++I+NPIS D MRT+L+P LL N+ R A+FEV V+ Sbjct: 532 DKLGLGADDSRRQAIQIINPISDDFRTMRTTLVPSLLNTAAYNLARQNDRVALFEVGRVF 591 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 P+ K + SG+ E VD FD K D V+E + Sbjct: 592 ---LPKALPLTEQPAEKTRLCVVLSGKRNELNWTESKDAVDFFDLKGDLELVLE-VLQAS 647 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + + HPG+S + + V G+ G HP + D FGLS E+ L S Sbjct: 648 GVTYAKPEEKFLHPGKSCTVLHDGKAV-GFMGALHPQVQDRFGLSGETFVLELDLSSF-- 704 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQG 755 + + + H+ RD+A +V Q + A L+ I+ L+ DV +FDV+ G Sbjct: 705 -VEGAERIPQFTHIPQFPSTSRDIAVVVPQTVSAVDLMAEIRTQAGPLLKDVRLFDVYSG 763 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 K + G KSVA + Q + T +D +I +++++V+ V ++ LR Sbjct: 764 KQVKAGCKSVAFSLTFQDITRTLQDKEINDIINQVVKKVQERFEGELR 811 >gi|310287626|ref|YP_003938884.1| Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium bifidum S17] gi|309251562|gb|ADO53310.1| Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium bifidum S17] Length = 869 Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 268/880 (30%), Positives = 409/880 (46%), Gaps = 115/880 (13%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP------ 56 + WLK+H++ +D++ E++ L +GLE E++ + P + V+ P Sbjct: 6 IDWLKEHVEVPSDLTYEQLAKDLVRVGLEEEEIHASQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 57 ------DLDCAILRID-TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 D+ A +D GK ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGPAYNAVDENGKKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFRIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L PI++++ Sbjct: 125 YGHVSDGMCASERELGLGDSHEGIILLRDYGFTPQEYKALKPGDDAMHLLHLDQPILEIN 184 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKL----KEIN---ISCPLSSESIPLEIKFDLDDSSL 213 +TP+R RG+A + + K E+N + P + + +I+ +DD++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAKFVDPVTELNKRAPAAPAAESGVSSDIEVIVDDNNP 244 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C + G N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVTGCDRYVARAIHGFDPTNHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG----RIQSIAGIIGGK 320 +D +I + VRRA GEK+ L +E+DLS ++++I + DG RI IAG++GG Sbjct: 305 YDLDKIEGPIVVRRAVEGEKLTTLGGKEHDLSVEDLLITDSPDGKRGSRILGIAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D ++IARS + I +++ RFERGVD Q + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDSVSIARSARRHKIPSEASRRFERGVDTQLQPAAAQMAAELL 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S N T R I F +EV R++G+DV + IL +G V G + Sbjct: 425 TKFGNGEPSGHPTDVNTTMYRRPIPFKATEVARVAGLDVDVNRISDILTDVGCRVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F VS P+WR D+ E DLVEE+ R+ G D+I +P V+ L+ Q R R+V Sbjct: 485 GEFSVSAPTWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVKGAVGLTPDQRRQRWVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ E F +EI NP++ D +R +LP L Sbjct: 544 DTLAEYGMVESLSYPFVGDEDFKAFSYDPAVIKPVSVEIANPLAGDRPYLRRDVLPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R + D ++E+ HVY D P G Q A Sbjct: 604 TVQRNLRRGLEDIRLYEIGHVYLWDPNAPAIPALPGGVRPSDEQLAALDAGLPDQPLHVA 663 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG- 643 G+ G+ SG G R WSD E R D A+ + LR + Sbjct: 664 GLLTGNAVDSGWLGDRRAVDWSDAVEAVRRVCDRLGARYE-------------LRQPAAQ 710 Query: 644 -APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV-------YLDSIP 695 P+ +HPGR+ I + E V+G GE HP + + GL FE+ LD P Sbjct: 711 DVPAQWHPGRAAQI-VAGEQVVGMVGELHPRVNEALGLPAHSAAFELNLTALFGTLDGKP 769 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQ 754 + K +++ PVK+DLAF VDQ + A L +++ ++ + +FDVF Sbjct: 770 VQAKP---------IATFPPVKQDLAFTVDQSVTAAQLEAVVREAAGANLESIELFDVFT 820 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 G+ +GEGKKS+A V + T +D + IV+ Sbjct: 821 GEQVGEGKKSLAFAVTFRSPSKTLSAEDSEAIRKAIVDKA 860 >gi|159901145|ref|YP_001547392.1| phenylalanyl-tRNA synthetase subunit beta [Herpetosiphon aurantiacus ATCC 23779] gi|159894184|gb|ABX07264.1| phenylalanyl-tRNA synthetase, beta subunit [Herpetosiphon aurantiacus ATCC 23779] Length = 838 Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 259/864 (29%), Positives = 440/864 (50%), Gaps = 86/864 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----------------- 43 M+ LSWL++ +D +S E++ + LT GLEV +D +P Sbjct: 1 MRVPLSWLREFVDITISPEELAERLTRAGLEVASIDYVGLQAPAGSAWAPDLSSATPPDY 60 Query: 44 -------FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLG---VWAP 92 + +++ V+ +P+ + + RI G+ +E+ VV GAPN+ +G+ G V A Sbjct: 61 IPWDRETIFVGQIVDVQPHPNAERLKLPRIAYGEGRELTVVTGAPNIELGMSGQKVVLAT 120 Query: 93 PGSCIPENN------MIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 G+ + + + + + K+RG+ S GM+CSE EL LSD+ I+ LP DAPVG L Sbjct: 121 KGARLLDGHSETRQWLTLKPTKLRGVPSEGMVCSEMELALSDEHDGIIFLPDDAPVGTPL 180 Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 +DY D ++++ TPN + + + G+A ++ A +L+ + P + +I +I+ Sbjct: 181 ADYW--GDAVLEIETTPNYAHTLSILGVAREVAALTGAELRMPSFDLPTNGPAIADKIQV 238 Query: 207 DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 ++ DS++C F ++GV+ +P WM++RL+ G R I+ + DITNYV L+ G PSH Sbjct: 239 EIVDSNICPRFVAGLIEGVKIAPSPWWMQRRLRLAGQRPINNIADITNYVMLELGEPSHA 298 Query: 267 FDASRISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 FDA +++ L +R A +GEK+ LD+ +L P + V+A S+AG++GG + Sbjct: 299 FDADQVAQGRLIIRPAAAGEKLETLDHVVRELRPIDTVVADPNGPSSLAGVMGGAASEIS 358 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI--VSLILSL 383 D+T +VL E ALW+PI I R+ ++ + +++ RFE+GVD +P I ++LI L Sbjct: 359 DSTVNVLYEAALWNPIAIRRTAQHFKLFSEASKRFEKGVD--PTLPPRTTIRGLNLIQQL 416 Query: 384 CGGTAS----DICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS-VIGE 438 GGT + D+C + + R+I EVKR+ GID+ + +L RLGF + E Sbjct: 417 AGGTIANGLVDVC---PVPFARREIELALGEVKRILGIDLEQAEVANLLSRLGFECAVVE 473 Query: 439 YDK---FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 + V VP+ R DVE +ADL+E++ R+YG D+I E L + +R L ++ T Sbjct: 474 SSRGPALHVLVPAHRTDVEIEADLLEDVARMYGYDRI-PEALMADTLPTQRANPLFEA-T 531 Query: 496 RYVKRVLASRAMMEVVNWSFI--SKEQSVLF----GGGQRELEILNPISADMSNMRTSLL 549 ++ +L + + E +++S S + SV ++ + + NP++ + S MR S+L Sbjct: 532 ERLRDMLVAAGLDEAISYSLSNDSLQNSVYVSENGANAEQFVRLENPLTPERSVMRRSIL 591 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYE-------NDTPEGQKYMAAGIRKGSSGIEGSG 602 P LL ++ R A+FE+ V+ D P + AG R+ S+ Sbjct: 592 PELLSIVVGDL-RERERVALFEIGAVFHPVAGQLLPDEPRNLALILAGTRQPST------ 644 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 WS S E D FD K V+ D F+ + HPGRS I + Sbjct: 645 --WSQPSPEG---FDFFDLKGVIEEVLRRHGLRDRASFQVASDERLHPGRSAKIVVDEVV 699 Query: 663 VLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 V FGE HP + D FG S P +C E+ +D + K ++ K +S +DLA Sbjct: 700 VG-VFGELHPLVRDRFGFSVPRVCIAELSVDQL----LKVSQPTKYTSISRFPATVQDLA 754 Query: 722 FIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 + + + A + IK ++DV +FDV+ G + G++S+A ++ + T D Sbjct: 755 LVANDELAADLIAKTIKQYGGEFLEDVRLFDVYTGSPIPAGQRSLAFRLRFRAPDRTLAD 814 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 D+ +++++ + ++ +RS Sbjct: 815 KDLLKTREKLLKQLERELGVQIRS 838 >gi|264679161|ref|YP_003279068.1| phenylalanyl-tRNA synthetase subunit beta [Comamonas testosteroni CNB-2] gi|262209674|gb|ACY33772.1| phenylalanyl-tRNA synthetase, beta subunit [Comamonas testosteroni CNB-2] Length = 822 Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 250/853 (29%), Positives = 432/853 (50%), Gaps = 81/853 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL+++ + +++ +++ DTLT GLEVE++D PFT + V ++ ++PD Sbjct: 1 MQFPESWLREYCNPNLTTQQLADTLTMAGLEVEELD--PVAPPFTGIVVGEIKEAVQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D I ++D G + + +VCGAPN RVG+ +G PPG+ + + K+R Sbjct: 59 ADRLRICQVDVGGPELLNIVCGAPNARVGIRIPCATVGAELPPGA--DGKPFKIKIGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM+CS KEL + +D++ ++E P DAP+G + +YL L D + + LTPN + C+ Sbjct: 117 GVQSFGMLCSAKELGIDEDASGLLEFPADAPLGQNVREYLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A +L A LK +S P ++ ++ ++ ++ + LC F+ V+ V V Sbjct: 177 VYGVARELSALTGTPLKA--LSFPAAAVALQDKLPVKIEATDLCGRFSGRIVRNVNTRVK 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +IS L VR GE + Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFELGRPSHIFDLDKISGGLNVRWGKEGETLKL 294 Query: 290 LDNQEYDLSPDNV----VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 L+ + D+ VIA D +++S+AGI+GG D+T ++ +E A W P +A Sbjct: 295 LNGNTIKI--DDFLKVGVIADDKQVESLAGIMGGDATAVSDDTRNIYIEAAFWFPKAVAG 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---- 401 ++ TD+ +RFERGVD + ++ I +L+L +CG + + + KP Sbjct: 353 RSRHFNFSTDAGHRFERGVDPEFTTEHIERITALVLEICGTPETQVGAMDD--QKPNMPA 410 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFE----VSVPSWRQDVE 454 + + + ++ G+ V + L L LG +V E E V+ P++R D+ Sbjct: 411 SKAVQLRVARAAKVIGMAVTQQQCLDALNGLGLPAAVASEGAAGEPVISVTAPTFRFDIN 470 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNW 513 + DL+EE+ R+ G + + + PL + K L + R+ Y V+ LA E +N+ Sbjct: 471 LEEDLIEEVARMIGYENLPTTK-PLAPISPK--LRAENERSPYAVRHELAGLGYQETINF 527 Query: 514 SFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 SF+ ++ G +++LNPI++ +S MR+SLL LL+ NVDR +FE+ Sbjct: 528 SFVEEKWEQELAGNSNAIKLLNPIASHLSVMRSSLLGSLLQVLKFNVDRKAQRVRVFELG 587 Query: 574 HVYEND--------TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 V+ D T +G Q AG+ G+ + +L ++E + VD +D K Sbjct: 588 RVFFKDESVVDSDTTVKGFYQPMRVAGLAYGA-----ADQLQWGRAEAK---VDFYDVKG 639 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 D +++ P + FE HPGR + + + G+ GE HP + L+ Sbjct: 640 DVEALLAPAKPV----FEPAEHPAMHPGRCARVLLDGKAI-GFVGELHPQWRQEWDLAQA 694 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 FE+ LD++ + K ++ V+RD+A +V + + ++ ++ + Sbjct: 695 PVMFELELDAVLAREVPVFKP-----VAKHQAVERDIAVVVKEAVTHAQVMEAVQQGVQG 749 Query: 743 -LIDDVTVFDVFQGK-----------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 ++ +FDVF+ K SL + +KS+A+++ + + D +I M Sbjct: 750 GILRSAVLFDVFRPKKLKAGEEAAPGSLAQDEKSLAVRLTLGSDTASLTDAEIDAAMQGT 809 Query: 791 VENVVKKTNAVLR 803 + +V++ A LR Sbjct: 810 IAALVERVAARLR 822 >gi|225848296|ref|YP_002728459.1| phenylalanyl-tRNA synthetase subunit beta [Sulfurihydrogenibium azorense Az-Fu1] gi|225644606|gb|ACN99656.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium azorense Az-Fu1] Length = 802 Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 246/811 (30%), Positives = 409/811 (50%), Gaps = 43/811 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK SW+K+ +D D+ ++ + L IG+E + T VK+LSVE++P+ D Sbjct: 1 MKVPYSWVKEFVDIDIPASEVAEKLNLIGIETTVYKFGNYIPNITTVKILSVEKHPEKDK 60 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 + + +E QV+ GA NV+ G + + A PG+ I + K I S GM+ S Sbjct: 61 LFVCKVSDGEREYQVITGADNVKAGSVVILAQPGAVILGKE--IKPVKFGSISSEGMLLS 118 Query: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL L + S I L D P+G + L++ SD I ++ +TPNR D + V+G++ ++ Sbjct: 119 LQELGLEEKSDGIFLLDEDTPIGVDANKVLDIGSDDIFEIEITPNRGDVLSVKGLSREIA 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AA K K+ P SI + I+ D + +KG++ +P +R +L Sbjct: 179 AAFGLKRKDYYPQLPSVENSIEINIQTDK-----VLRYKATVIKGIKVKQSPLSVRLKLI 233 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 GL I+ +VDITNY+ L G P H FD +I +TVR A GEKIL LD QE L+ Sbjct: 234 KSGLSVINNIVDITNYILLQEGQPLHAFDLDKIEGKITVRNAFEGEKILTLDGQERVLTN 293 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 ++VIA D + +IAG+IGG+++ D NT ++L+E A++DP ++ ++ K L I+TDS YR Sbjct: 294 QDIVIADDKKPLAIAGVIGGENSKIDQNTQNILLESAVFDPTSVRKTAKRLSILTDSSYR 353 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD++ VSLILSL GG + Y+P+ +V S ++++ G + Sbjct: 354 FERGVDIENCSTASDKAVSLILSLAGGEVKTVKDLYLKPYQPKTVVLRPSFIEKILGSKI 413 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSE--P 476 E +++IL L V E ++F+V +PS+R D+E + DLVEE+ R+YG D+ + + Sbjct: 414 EDETTIKILTGLEIPVEKEGEEFKVHIPSFRSYDLEREIDLVEEVARVYGYDKFEEDYPK 473 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 +P ++ V++ + EV+N++F S + ++ I N Sbjct: 474 IPTKIFSKPKDYEFDTK----VRQFFLNSGFTEVLNYTFTSPDFYNTLSLPLPKIHIQNY 529 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS- 595 I S MR +++ L++ N+ D +IFE+S + +D + AG+ G Sbjct: 530 ILKSQSVMRDTVVVSLIQNQVENLRFGRKDLSIFELSSTFFDD---HESINVAGLVSGKL 586 Query: 596 -SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 G + + S + F+ L + L+ F+ LD L + P + HP S Sbjct: 587 VDGYNYTSPIRSFSTNRDWDFLSLKGVIDNFLT----FLGLDYLVSDENLPVFLHPYESA 642 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 I V GY G+ HP + F + FE+ L +P + + ++ L+ Sbjct: 643 NIIVMGYTV-GYVGKIHPKVAAEFEIPKNTFVFELKLKYVPRDINENPLKEGYIYTYYLN 701 Query: 715 -------------PVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEG 761 PVKRDLAF++D ++ G L+ +K L+ ++ +FDV+ L Sbjct: 702 KRPIIYKEIPKYPPVKRDLAFVIDVNLKVGNLIEDLKKASNLVKNIKLFDVY---FLSNS 758 Query: 762 KKSVAIQV-LIQPLKDTFRDDDIRILMDRIV 791 +KSVA+ V + P K+ D+++ + ++ I+ Sbjct: 759 RKSVAVSVEFLHPDKN-LSDEEVNLEVEEIL 788 >gi|74317030|ref|YP_314770.1| phenylalanyl-tRNA synthetase subunit beta [Thiobacillus denitrificans ATCC 25259] gi|91208146|sp|Q3SK29|SYFB_THIDA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|74056525|gb|AAZ96965.1| phenylalanyl-tRNA synthetase, beta subunit [Thiobacillus denitrificans ATCC 25259] Length = 781 Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 259/818 (31%), Positives = 417/818 (50%), Gaps = 51/818 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F+ +WL+ ++ + ++ LT GLEVE + A PF + ++LS +++PD Sbjct: 1 MQFSEAWLRKLVNPALDTTELAHALTMAGLEVEALTA--AAPPFNDVVVAEILSAQKHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ +VCGAPN GL A PG+ +P + + V K+RG+ES G Sbjct: 59 ADRLRVCQVDIGEAAPATIVCGAPNAAAGLKVPCARPGAKLP--GIEIKVAKVRGVESFG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS KEL L + +M LP DAPVG L +L L D ++ + LTPNR+DC+ + GIA Sbjct: 117 MLCSTKELGLEGAADGLMVLPDDAPVGEDLRGWLNLDDTLVTLKLTPNRADCLSLVGIAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL---EIKFDLDDSSLCKGFAMCCVKGV-RNNVAPN 232 ++ G + + P +S P ++ + S C + V+G+ P Sbjct: 177 EV-----GAITGAEVRIPQASPVAPRIADTVEVTVAASDACSRYLGRVVRGIDAQATTPR 231 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM +RL+ G+R + A +D+TNYV L+ G P H F SR+S + VR A +GE + L Sbjct: 232 WMAERLERGGIRPLLAPIDVTNYVLLELGQPMHAFALSRLSGGIEVRLARAGETLALLSG 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q +LSPD +VIA ++AGI+GG+ + T DV +E A + P IA + LG+ Sbjct: 292 QTVELSPDMLVIADASGPVALAGIMGGQATSVERATVDVFLEAAFFAPAAIAGRARRLGL 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 TDS +RFERGVD + ++ L+L +CGG I + I S ++ Sbjct: 352 STDSAHRFERGVDFGAIHAAMERATQLLLDICGGQPGPISEVTGSLPRREPIELRLSRLR 411 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 R++G+++ + +R L LG V ++ V+ PS+R D+ + DL+EE +R++G D+I Sbjct: 412 RVAGVELGADQVIRDLAALGCVVEQADERLVVTPPSFRFDLAIEEDLIEEAVRLFGYDRI 471 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM----MEVVNWSFISKEQSVLFGGGQ 528 + P + L Q TR L + + EV+ +SF+ Sbjct: 472 PARP------PAAPSRMLAQDETRIADDALRQKMVDLDYQEVITYSFVDPAGEQALDPDV 525 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 R L + NPI++ +S MRT+L GL++ N++R IFE+ VY + + +K Sbjct: 526 RLLTLANPIASQLSVMRTTLWGGLIETLRHNLNRQQERVRIFELGRVYASLAEQPRKL-- 583 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSW 647 G+ G + E W R VD FD K D + +P LD+ R E A Sbjct: 584 GGLAYGEALPEQ----WGVPG----RRVDFFDVKGDLERLFGQP---LDAGRGEHPA--- 629 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPG+S + G+ G HP ++ F L+ FE LDS ++ R + Sbjct: 630 LHPGQSAALWVDGHRG-GWIGALHPRLVQAFDLAAAPVLFE--LDSEILA---RRALPRH 683 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVA 766 LS V+RDLAF++D + AG L+ ++ I + VFD ++GK + + +KS+A Sbjct: 684 AGLSRFPQVRRDLAFVLDAGLAAGDLLAALREAAPASIRAIEVFDDYRGKGVDQNQKSLA 743 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 I+V++Q + T D D+ + ++V+ ++ +A LR+ Sbjct: 744 IRVVMQDTERTLTDRDVDEAVQKLVDAAARRCSATLRA 781 >gi|20808114|ref|NP_623285.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacter tengcongensis MB4] gi|30316248|sp|Q8R9C7|SYFB_THETN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|20516700|gb|AAM24889.1| Phenylalanyl-tRNA synthetase beta subunit [Thermoanaerobacter tengcongensis MB4] Length = 794 Score = 350 bits (899), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 248/823 (30%), Positives = 422/823 (51%), Gaps = 49/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +LSWLK+ +D D + I + LT G +VE + + E +S + +++S+E++P+ D Sbjct: 1 MLVSLSWLKEFVDIDEDAKTIAEGLTMSGSKVEGIKSYGEEISNVVVGQIVSLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + I +++Q+V GA N++VG A G+ +P + + K+RG+ES GMMC Sbjct: 61 KLWVGIVDIGSEKLQIVTGAENIKVGAYIPVALHGATLP-GGVKIKRSKLRGVESEGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L + I LP P+G +++ L+L D +++ +TPNR DC+ V G Sbjct: 120 SAEELGLDESLLPEYQRNGIFILP-PLPLGMDINEALQLKDDVLEFEITPNRPDCLSVVG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA + A + I E P + + D LC + VK V+ +P W Sbjct: 179 IARETAATFRKSFRMPEIRVTEVEEPNPARVTIEAPD--LCYRYVARVVKNVKIGPSPIW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV L+ G P H FD ++ + + VRRA GEK++ LD Sbjct: 237 MQVRLLKAGIRPINNVVDVTNYVMLELGQPLHAFDLDKVKNKHIIVRRARDGEKLVTLDG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L +VIA + + +AG++GG++ D+T ++L+E A + NI + K LG+ Sbjct: 297 KERILDSSMLVIADEEKAIGLAGVMGGENTEITDSTVNILIESANFKGSNIRHTSKKLGL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 +++ RFE+G+D + + + L+ CGG + R ++ + + + Sbjct: 357 RSEASARFEKGLDPEITVLACERAAQLMEKYCGGEVLKGIVDEYPKPMERTVLTVRPDRI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ + + IL L F V+ + ++ E+ VP +R+DV +AD+ EEI R+YG + Sbjct: 417 NKFLGTNLATSEMIEILRSLEFEVVEKGEELEIKVPHFRKDVTMEADIAEEIARLYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---------EQSV 522 I+ + Q +L+ +Q + VL + + E+V SF+ + + SV Sbjct: 477 IEDSLMKNAQT-TLGSLTKEQQLEEKAREVLLACGLNEIVTMSFMGERDLDRINVPKDSV 535 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTP 581 L ++ ++I+NP+ + S MRT+LLP +L N R + +F FE+S V+ + P Sbjct: 536 L----RKAVKIINPLGEEQSLMRTTLLPFMLNVAYTNYSRKVGEFRAFEISRVFLPKELP 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 K + ++ S G+ G + VD + K ++E +D Sbjct: 592 --LKELPEEVKTISLGMYG-------------KEVDFYTIKGVIEELLEVMGIVDVEYVR 636 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + PS YHPGRS I E VLG FGE HP++L+ + L + E+ LD I K Sbjct: 637 AEEPS-YHPGRSAKILFKEE-VLGVFGEVHPDVLENYDLPVRVYAGELNLDKI---IKFA 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 KK L V+RD+A +VD+ + + +IK R ++ +FDV++G ++ E Sbjct: 692 NVDKKYTPLPKYPAVERDIAVVVDKDLFVAEVEKVIKETGRGFVEKTALFDVYKGPNIPE 751 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKSVA + + + T D+++ + RIV+ + +K A LR Sbjct: 752 GKKSVAFSIWYRSYEKTLTDEEVNEVHARIVKALEEKLGAKLR 794 >gi|148654112|ref|YP_001281205.1| phenylalanyl-tRNA synthetase subunit beta [Psychrobacter sp. PRwf-1] gi|148573196|gb|ABQ95255.1| phenylalanyl-tRNA synthetase beta subunit [Psychrobacter sp. PRwf-1] Length = 803 Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 250/830 (30%), Positives = 422/830 (50%), Gaps = 52/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ + + + D LT GLE++ ++ A S + +V+SVE++PD D Sbjct: 1 MKISEQWLREWVNPNNDTQALADQLTMAGLEIDDIEAVAADFSGVVVGEVISVEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 + +++ +Q+VCGAPNVRVG+ A G+ +P + K+RG+ES Sbjct: 61 KLRVTQVNINSDAPLQIVCGAPNVRVGMRAPVATIGAKLPTADGQGFKIKKSKLRGVESQ 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C E+ L D ++ELP DAP+G + +YL L + I+D+S+TPNR DC VRGIA Sbjct: 121 GMLCGASEIDLPDVVDGLLELPDDAPIGTDIREYLGLDNKILDISITPNRGDCFSVRGIA 180 Query: 176 LDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGF-AMCCVKGVRNNVAP 231 ++ G + + I+ P ++ + ++ + C + A ++ R+ P Sbjct: 181 REI-----GVINGLPITAPEVTAQADEVQASQAVTVEATEACPRYLAQPVLEIDRSIETP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM++ L G R + LVD+TNYV L+ G P H FDA +I + VR A +GE++ L+ Sbjct: 236 DWMQKSLLQSGQRLHNFLVDVTNYVLLELGQPLHAFDADKIVGDIQVRMAKAGEQLELLN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q L+ D +VIA D I ++AGI+GG + D+TT++++E A +D + IA + G Sbjct: 296 EQTVTLTGDELVIADDQGILALAGIMGGMRSSVSDSTTNIVLESAFFDQLAIAGRARRFG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNS 409 + TD+ RFERGVD + + L+ V+LI S+ G A I + + P++ + + Sbjct: 356 LHTDASQRFERGVDFELPLTALRRAVNLISSIAHGKAGQITVIEHSDKLPKRAPVQLPFN 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK---FEVSVPSWRQDVEEKADLVEEILR 465 +V + GI++ + + IL +L V + E D F PS R D+E K DL+EEI R Sbjct: 416 KVAEVIGIEIEKQRIIDILTQLEIDVEVSEQDGSTVFNCLPPSHRFDIEIKEDLIEEIAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-----Q 520 IYG D I S LP V+ + + + T +K + ME +++SF ++ Sbjct: 476 IYGYDNIPST-LPKLGVDMRYDDT--ADLTHRLKLAMVDAGYMEAISFSFSDEKIENILD 532 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 V G L + NPIS+D++ MR +LL L+ N++R FE Sbjct: 533 DVNLGN---LLALANPISSDLAVMRRTLLSSLIPCVQYNLNRQQPRVRFFET-------- 581 Query: 581 PEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 G ++ A I + S I +G ++ +++ R +D FD K D ++ + Sbjct: 582 --GLSFVGATIDELVQTPSLAIVATGDVYPEQAHSN-RAMDFFDLKHDVEQLLPATLDES 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + ++ ++ HPG+S + E+V G+ G+ HP++ L + + L PI Sbjct: 639 RISYQRSELAFLHPGQSAELLIDGEVV-GWLGQLHPSVAQKLDLPS---TWVAQLALAPI 694 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 + R + + S V+RD+A +VD + L I+ L+ +FDV+QG Sbjct: 695 LGQARA-IQSITSPSKFPQVRRDIALLVDSEVSRQALSQSIRQAGGALLQQHWLFDVYQG 753 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + +G +SVA ++ Q T DD + M +++ + + A LR S Sbjct: 754 EHTPQGMRSVAFALVWQDPAQTLSDDVVNDAMQKVIAALQTEHGAQLRDS 803 >gi|332523930|ref|ZP_08400182.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] gi|332315194|gb|EGJ28179.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus porcinus str. Jelinkova 176] Length = 801 Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 249/822 (30%), Positives = 428/822 (52%), Gaps = 40/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ A LS + VLS + P+ Sbjct: 1 MLVSYKWLKELVDIDVTSAELAEKMSTTGIEVEGVEVPSAGLSKLVVGHVLSCQDVPETY 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEEPRQIVCGAPNVKAGINVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEFAEGIQVLPTDANPGDSIFPYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +KEI+ S +S+ + + I+ D+ L +A V+ V Sbjct: 180 VAYE-VAAIYGKEVHFPVKEIHESPKEASDVLSVAIE---SDNVLT--YASRVVENVTIQ 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + ++ + R+A GE + Sbjct: 234 PSPQWLQNILMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFANRSIIARQARDGEML 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L ++VI + + ++AG++GGK D +T +++E A++D +I ++ Sbjct: 294 ITLDGEERQLISQDIVITVNDKPVALAGVMGGKETEIDYGSTKIVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G + A + +P +++ Sbjct: 354 SRLNLRSESSSRFEKGVNYDTVLEALDFAAAMLEELAQGQVLAGRIQAGQLPTEPVQVLT 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ D I +LGF + G+ F VSVP R D+ +ADLVEEI RI Sbjct: 414 TLDYVNVRLGTDLAYTDIEEIFAKLGFGLKGDASAFTVSVPRRRWDISIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q R V+ V + E+++++ + E++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAGELTASQVLRRRVRAVAEGAGLTEIISYALTTPEKAQA 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F +L E++ P++ + S +R +++ G+L NV R + AI+E+ ++E E Sbjct: 529 FTIQPSKLTELMWPMTIERSALRQNIVSGMLDTVAYNVARKQKNLAIYEIGKIFEQ---E 585 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G + SG + + + ++VD F AK ++ S E Sbjct: 586 GDPKSDLPNEIDTFAFAMSGLVAEKDFQTQAQYVDFFYAKGILENLFHKLGIKVSFVTEK 645 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 S HPGR+ + + + LG+ G+ HP + + + E+ L I S K Sbjct: 646 EMASM-HPGRTARLILNNQ-TLGFVGQVHPQVASDYDIPETYVA-ELNLQMIEESMKSSQ 702 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEG 761 K++ S + V RD+A +VD +++II+N+ + ++ + +FDV+ G + G Sbjct: 703 IFKEI---SKVPAVSRDIAILVDDSTSHQDIISIIENLGIKYLESIKLFDVYAGAHIESG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A ++ Q +++ RD+D+ MD+I +V++ A +R Sbjct: 760 KKSMAYNLMFQNPQESLRDEDVTKYMDKITTALVEEAGAQVR 801 >gi|317403229|gb|EFV83748.1| phenylalanyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans C54] Length = 805 Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 255/827 (30%), Positives = 433/827 (52%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ +++ LT GLEVE V A + + ++ + +PD D Sbjct: 1 MQFPESWLRTLVNPPIATDELAHRLTMAGLEVEDTVPAAPAFTGVVVAHIVEIAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPN GL A G+ +P M + V K+RG++S+GM+ Sbjct: 61 KLRVCQVDDGSGALLQIVCGAPNAAAGLKVPLARVGAELP-GGMKIGVAKMRGVQSSGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS D A ++ELP D G + + L+L D + + +TPNR+DC+ + G+A ++ Sbjct: 120 CSARELGLSQDHAGLLELPADMAPGQSIREALDLDDTLFTLKMTPNRADCLSILGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEI----KFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A L +S P +++++P+ + ++ LC F ++GV P W Sbjct: 180 AA-----LTGAPLSVP-TAKAVPVTLDELRPVRIEAPDLCGRFGGRVIRGVNARAQTPAW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+ RL+ G RS+SALVDI+NYV L+ G PSHVFD +I L+VR A GE + L+ Q Sbjct: 234 MKTRLERAGQRSVSALVDISNYVMLELGRPSHVFDLDKIHGDLSVRWAREGETLELLNGQ 293 Query: 294 EYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 L S VV+A D +++S+AGI+GG+ +T ++ +E A W P ++A + Sbjct: 294 TVTLDSKVGVVVAGD-QVESLAGIMGGEATAVTLDTQNIYLEAAFWWPQSLAGRARRYKF 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEV 411 +++ +R ERGVD + ++ I LI+ +CGG A + + + R+ V M + Sbjct: 353 SSEASHRGERGVDFATIPQHIEFITRLIVDICGGQAGPLD-DQIVNLPKREPVRMRLARC 411 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R+ G+ V + +I LG + D F V+ PS+R D+E + DL+EE+ RIYG + Sbjct: 412 HRVLGVPVTQAEVAKIFGSLGLEFTLDGDDFVVTPPSYRFDLEIEEDLIEEVARIYGFEN 471 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I + P PL + + +++ ++R+ A++ EVVN+SF+ E + G + Sbjct: 472 IPTVP-PLARAKMFSQPEVRRG-PHALRRLAAAQDYQEVVNYSFVEAEWERDYAGNDTPV 529 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAG 590 +++NPI++ +S MR+SL+ GL+ N +R +FE+ V+ +D + AG Sbjct: 530 KLVNPIASHLSVMRSSLIAGLVANIRHNANRKQTRVRLFELGRVFARDDAAKDGPLEVAG 589 Query: 591 IRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 +R+ ++ +G W EE+ R VD +D K D ++ + LRFE+ A Sbjct: 590 VRQ---PLKLAGAAWGPSVEEQWGVPARQVDFYDVKMDVEALFGARGA--RLRFEAAAHP 644 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGRS I V G+ GE HP L++ FE LD +S+ + + ++ Sbjct: 645 ALHPGRSARITLDGTQV-GWLGELHPRWAQQADLAHAPVVFE--LDVQALSEGELPQVRE 701 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKSLGE 760 LS V RDLA VD + ++++ + + ++ DV +FDV++ K G+ Sbjct: 702 ---LSRQPVVVRDLALWVDAPVTVQSMLDTVAATVKADPQLAVVQDVRLFDVWREKPQGD 758 Query: 761 ---GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KS+A + +Q + T + + + RI + +V A R+ Sbjct: 759 QPVAEKSLAFRFWLQDTEVTLDEARVAACLARIKDALVSAHGARQRA 805 >gi|126640671|ref|YP_001083655.1| phenylalanyl-tRNA synthetase subunit beta [Acinetobacter baumannii ATCC 17978] Length = 767 Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 249/801 (31%), Positives = 403/801 (50%), Gaps = 58/801 (7%) Query: 28 IGLEVEKVDNREALSPFTIV---KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVR 83 +GLEV+++ PFT V +VL+VE++PD D + ++ G + +Q+VCGAPNVR Sbjct: 2 LGLEVDEL--APVAKPFTGVVVGEVLTVEQHPDADRLRVTTVNIGSGEPLQIVCGAPNVR 59 Query: 84 VGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVG 143 G+ A G+ +P + + K+RG+ES GM+C E+ L D ++ELP DAPVG Sbjct: 60 AGMKAPVATIGAILP-GDFKIKKGKLRGVESQGMLCGASEIDLEDKIDGLLELPADAPVG 118 Query: 144 GRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE 203 + +YL+L D +ID+S+TPNR DC +RGIA ++ ++ E I ++ + + Sbjct: 119 VNIREYLKLDDNVIDISITPNRGDCFSIRGIAREVAVINQLQMNEPEIKSVDATITDEKK 178 Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 + + D + G +K V A P WM Q L G+R+ S LVDITNYV ++ G Sbjct: 179 VVINTDGAPRYLG---RVIKNVNVKAATPEWMEQALARSGIRTHSILVDITNYVLMELGQ 235 Query: 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA 322 P H FD ++I + VR+A EK+ L++QE +L D +VIA D + +IAGI+GG + Sbjct: 236 PMHAFDLAKIEGTVHVRQAKPKEKLQLLNDQEVELQDDVMVIADDQKALAIAGIMGGLAS 295 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 D+TTD+ +E A + P+ IA + G+ TDS R+ERGVD + + + LI Sbjct: 296 SVTDDTTDIFLESAFFAPLAIAGRARRFGLHTDSSQRYERGVDFELPLIAMNRASQLIQE 355 Query: 383 LCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 L GG I +A P++ I ++V +L G V E L RLG V + D Sbjct: 356 LAGGEFGPITVAEKSDLLPKREAIELKQAQVDQLLGYKVAAEFITDALTRLGCEVTVQAD 415 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----SEPLPLTQVEDKRNLSLQQSRT 495 ++ V PS R D+ DL+EE+ RI G D I+ S + L + +D+ ++ Sbjct: 416 GEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNIQISLPSMDVQLAKYQDRFEIA------ 469 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 +++ + + E +++SF + L + NPIS+D++ MR++LL L+ Sbjct: 470 -QLRQTVVTLGYQEAISFSFADAKLEKQLNPQVSPLMLANPISSDLAAMRSTLLSSLIPC 528 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQK---------YMAAGIRKGSSGIEGSGRLWS 606 N++R + FE+ ++ + +A G R+ S W Sbjct: 529 VQYNLNRQQSRVRFFELGLRFDYQNANSIQDLKQIPTLALVAVGSREPES--------WH 580 Query: 607 DKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 K + +D FD K + ++ V ++ +R E W HPG+S I + + G Sbjct: 581 AKPQP----MDFFDFKGEVEEILAAGRVKVEYVRSER---PWLHPGQSAEILVDGQSI-G 632 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 Y G HP++ + LS + LD + Q + LS V+RD+A ++ Sbjct: 633 YLGRLHPSLENELDLS---TTWVAELDQAAVLQ---SYVSNFTELSRFPSVRRDIALLIS 686 Query: 726 QHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 +I + +I K L+D +FDV+ G+ + EGK+S+A +L Q T D +I+ Sbjct: 687 DNINVRDIQQLIEKTGGELLDSTWLFDVYTGQGVEEGKRSLAFALLWQHPSRTLEDAEIK 746 Query: 785 ILMDRIVENVVKKTNAVLRSS 805 MD I++ + A LR+S Sbjct: 747 SGMDNIIQVLENTYQATLRAS 767 >gi|51245275|ref|YP_065159.1| phenylalanyl-tRNA synthetase, beta chain [Desulfotalea psychrophila LSv54] gi|66773902|sp|Q6ANC2|SYFB_DESPS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|50876312|emb|CAG36152.1| related to phenylalanyl-tRNA synthetase, beta chain [Desulfotalea psychrophila LSv54] Length = 816 Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 253/839 (30%), Positives = 424/839 (50%), Gaps = 57/839 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MKFTL+WL+ ++DT ++ +I D LT +GLEV+ V E L+ V+S E++PD Sbjct: 1 MKFTLNWLQKYVDTTGLTPTEIADKLTMLGLEVDSVAPIFEELAALKTGLVISCEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ ++ G Q+VCGAPNVR GL A PG+ +P N + K+RGI S GM Sbjct: 61 DKLSLCQVQVGDDTH-QIVCGAPNVREGLAVTVALPGAVLP-GNFKIKKSKVRGIASAGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE+EL + +D IMELP G R D +ELSD I+V LTPNR DC V G A + Sbjct: 119 LCSERELGIGEDHDGIMELPEGMAHGQRFIDAMELSDTFIEVDLTPNRPDCASVIGTARE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 +A +G+ +I P+ I E +++ S LC + +K V +P W+ Sbjct: 179 -IAGKIGRPLQI----PVKDRQIEAESRDFSVEVESSELCPRYTAKLIKNVTVGKSPWWL 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE-KILALDN 292 R+ L +VG+R I+ +VDITN+V L+ G P H FD +++ + + VR E +I LD Sbjct: 234 RKLLVSVGMRPINNIVDITNFVMLEYGQPLHAFDFKKVAGNKIVVRLPRENETEITTLDG 293 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + ++S + ++I + ++AG++GG ++ D +TD+L+E A ++P+++ ++ +NL + Sbjct: 294 TKREISAEMLLICDADKPIAVAGVMGGANSEIDAESTDILLESACFNPVSVRKTARNLKL 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV----FMN 408 +++ YRFERGVD G++ L LI + GG +C Y +K V F Sbjct: 354 PSEASYRFERGVDPGGVVNALDRAAELIAEIAGGA---LCSEGIDNYDGKKAVEVQRFSI 410 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGE---YDKFEVSVPSWRQDVEEKADLVEEILR 465 S L G++ E+ +L + V + D V+ P++R D+E +ADLVEEI R Sbjct: 411 SRTSSLIGVEFSGEELTAMLTSIEMVVEKDPENEDILLVTAPTFRIDIEREADLVEEIAR 470 Query: 466 IYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFISKEQSVL 523 IYG D + + PL ++ + L+ RY + +R E +N+SF++ + + + Sbjct: 471 IYGYDNVPTATPLVALSYPEQDDDRLK----RYPLALKLTRIGFNEAINYSFVTAQHADM 526 Query: 524 FGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 +++ + +LNP+S + + MR LLP LL+ RN+ +FE+ ++ Sbjct: 527 LQLSEQDYRRKVVTLLNPLSEEQAVMRACLLPSLLENVKRNISFQKTAVKLFEIGKIFLA 586 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 D ++ G+ G+ E S + + VD+FDAK ++ Sbjct: 587 QGEDVQPIERQCITGVLSGNKFGESSSLYFKSAN------VDIFDAKGTVEFILSEMGLT 640 Query: 636 DSLRFE--------SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 D E GA + + VLG G+ +L FG+ + + F Sbjct: 641 DLANNEKIEFTVPPEGAREPFSTQDYALTIHLGPNVLGTIGKVEEEVLKSFGIKHEVYYF 700 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 ++ D++ +TK L VKRD+A +V I AG L+ +++ D+L++ Sbjct: 701 DLNFDALCALSP---QTKAFSSLPVYPAVKRDIALVVPASISAGELLATVRSSRDKLMEY 757 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +FDVF+G + +G KSVA+ + + T + ++ +IV + + R + Sbjct: 758 AEIFDVFEGGKIQKGYKSVAVSITYRSQTKTLTEKNVEKSHSKIVSLLTDRFGGSFRDA 816 >gi|134095001|ref|YP_001100076.1| phenylalanyl-tRNA synthetase subunit beta [Herminiimonas arsenicoxydans] gi|133738904|emb|CAL61951.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Herminiimonas arsenicoxydans] Length = 809 Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust. Identities = 249/802 (31%), Positives = 402/802 (50%), Gaps = 37/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPD 57 M+F+ SWL+ ++ +++ ++ LT GLEVE+V+ PF+ + +V + ++P+ Sbjct: 1 MQFSESWLRTMVNPNMTSNELAHMLTMSGLEVEEVE--PVAPPFSNVVVAEVREIAKHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + ++D G + +VCGAPNVR G+ V A G+ +P + V +RG+ Sbjct: 59 ADRLNVCQVDAGTGTLLNIVCGAPNVRAGMKVVCALAGAVLPPGEDGKPFEIKVGALRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS KEL LSD+ +M+LP DAP+G DY +L+D + LTPN++DC+ V Sbjct: 119 ESQGMLCSVKELKLSDEQGGLMDLPSDAPIGQNFRDYYQLNDLKFTIKLTPNKADCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-P 231 G+A ++ A LK ++ + L + D LC F+ ++G+ + P Sbjct: 179 GVAREVSALTGTPLKMPTYQAVAATIADVLPVTVSAPD--LCGRFSGRIIRGLNARASTP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM+QRL+ G R ISALVDI+NYV L+ G P+HVFD +I L VR E + L+ Sbjct: 237 DWMKQRLERSGQRPISALVDISNYVMLELGRPTHVFDLDKIHGGLNVRWGKKDESLKLLN 296 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + VIA + +I+S+AGI+GG +T D+ +E A W P I + Sbjct: 297 GNTVAVDEWIGVIADEQQIESLAGIMGGDATAVSLDTQDIYLEAAFWYPNAIQGRARRFN 356 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNS 409 TD+ +RFERGVD + ++ I +LI+ +CG I +I P++ Sbjct: 357 FSTDAAHRFERGVDFATTVEHIERITALIVEICGQKDKTAVGPIDDHIVNLPKRDPVSVR 416 Query: 410 EVKRLSGIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + I VP+ D+ I RL + F V+ PS+R D+E + DL+EEI R+Y Sbjct: 417 TARAVKVIGVPLTDAQIADIFTRLALPFTQKDGVFSVTPPSYRFDIEIEEDLIEEIARVY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G + I + P T R S + T ++R LA EVVN+SF+ + F G Sbjct: 477 GFENIPALPPVATNAMRIRPESTRSLFT--IRRQLADADYQEVVNFSFVEQAWEADFAGN 534 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 +++LNPI++ MS MR+S++ L+ N++R ++ +FE+ VY N +G Sbjct: 535 SNPIKLLNPIASQMSVMRSSMIGNLIANVRYNLNRKVSRIRLFEIGAVYLRNNIEQDGPL 594 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 +A + + G + ++ R VD FD KAD ++ P L F Sbjct: 595 SVAGYDQPKHAAAIAYGPIVEEQWGMDSRNVDYFDVKADLEALFAP----KMLTFAKVEH 650 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGRS + + V+G+ GE HP + L FEV S+ ++ Sbjct: 651 PALHPGRSAHVLLDGK-VIGFIGELHPRWQQKYDLPLAPVLFEVEASSL-----QQVNVP 704 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI------IKNVDRLIDDVTVFDVFQGKSLG 759 +S V RDLA +V + L+++ + + ++ V +FD ++GK L Sbjct: 705 SYREISKFPAVTRDLALVVKHTVSMQDLMDVFVAEKKMNPICNILQVVVLFDEYRGKGLE 764 Query: 760 EGKKSVAIQVLIQPLKDTFRDD 781 +KS+A + +Q + T +DD Sbjct: 765 SDEKSLAFRCTLQDTQLTLQDD 786 >gi|312278624|gb|ADQ63281.1| Phenylalanyl-tRNA synthetase beta subunit [Streptococcus thermophilus ND03] Length = 816 Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust. Identities = 256/831 (30%), Positives = 430/831 (51%), Gaps = 57/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E LS + VLS E P+ Sbjct: 15 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVKTPAEGLSKLVVGHVLSCEDVPETH 74 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 75 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 133 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 134 CSLAELGLPDSIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 193 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 194 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVTTYASRVVENVTVQ 248 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ + + R A GEK+ Sbjct: 249 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKLEESHIVARDAREGEKL 308 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + S+ GI+GG D+N+ +V++E A++D ++ ++ Sbjct: 309 VTLDGEERELTAEDIVITVADKPVSLGGIMGGASTEIDNNSKNVVLEAAVFDGKSVRKTS 368 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G+ + A ++ +P ++ Sbjct: 369 SRLNLRSESSSRFEKGVNNDTVLEALDFAAAMLQELANGSVLAGRVQAGSVDTEPVQVST 428 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF + G+ D+F VSVP R D+ +ADLVEEI RI Sbjct: 429 SLDYVNVRLGTELTFADIEDVFEKLGFGLTGDADRFTVSVPRRRWDISIQADLVEEIARI 488 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 489 YGY-----EKLPTTLPEAAGTSGELTKTQTLRRKVRTIAEGAGLTEIISYTLTTPEKAVE 543 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTP 581 F L E++ P++ D S +R +L+ G+L NV+R ++ AI+E+ V+E N P Sbjct: 544 FAATPSNLTELMWPMTVDRSALRQNLVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQNGNP 603 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-----VSLD 636 ++ + I + I SG + + + VD F AK +IE VS+D Sbjct: 604 --KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKG----IIEALFNKLEVSVD 655 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + A HPGR+ I + + G+ G+ HP +G+ E Y+ I + Sbjct: 656 YVATKDLAS--MHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINL 706 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDV 752 S + + V ++ V RD+A ++ I +++ I V RLI V +FDV Sbjct: 707 SAVEDALKPAQPFVEITKFPAVSRDIALLLKADITHQEVLDAIYSAGVKRLI-AVKLFDV 765 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 766 YTGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVEAEVR 816 >gi|194017335|ref|ZP_03055947.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] gi|194011203|gb|EDW20773.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus pumilus ATCC 7061] Length = 804 Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 245/824 (29%), Positives = 418/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + +++ + +T G+EVE V+ + E + I V+ E++P+ Sbjct: 1 MFVSYKWLEDYVDLEGIQPDELAEKITRSGIEVEAVEYKGEGIKGVVIGHVVEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G+ + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGEDEPVQIICGAPNVDKGQYVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P D G L+L D ++++ LTPNR+D Sbjct: 117 HGMICSLQELGVESKLVPKEYAEGIFVFPNDVKPGDDALQALQLDDAVLELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + + G+A + VAA LGK +K + + +SSE I ++D +A +K V+ Sbjct: 177 LNMLGVAYE-VAAILGKDIKLPDTAHDMSSEKTADYISVKIEDQEANPLYAAKIIKNVKI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 AP W++ RL G+R I+ +VDITN+V L+ G P H FD R S + VR+A E Sbjct: 236 GPAPLWIQTRLMNAGIRPINNVVDITNFVLLEYGQPLHAFDYDRFGSKQVVVRKATDSES 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD QE LS ++VI + + ++AG++GG + D TT +L+E A ++ + ++ Sbjct: 296 IQTLDEQERTLSSKHLVITNGTKAHAVAGVMGGLESEVRDETTTILLEAAYFNGQTVRQA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++LG+ ++S RFE+G+D Q + LI GG + N ++ Sbjct: 356 SRDLGLRSESSTRFEKGLDPQRTKSAAERAAQLISLYAGGEVLSGTVEENHLQTSMNVIH 415 Query: 407 MNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +++E V ++ G+ + ED ++I +LGF+V D V+VPS R D+ + DL+EE+ R Sbjct: 416 VSTERVNKVLGMSISKEDMIQIFNKLGFTVGESNDVLVVTVPSRRMDITIEEDLIEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG D I S LP T L+ Q + R V+R L + + + +S ++ +S F Sbjct: 476 LYGYDNIPS-TLPAT-AGTVGGLTPYQVKRRKVRRFLEGAGLSQAITYSLTNQHKSTAFA 533 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + + P+S + S +R SLLP LL + N+ R F +E V+ E Sbjct: 534 LNPAYKTRLSLPMSEERSVLRQSLLPNLLDSVAYNLARQADSFGFYETGSVFLAEAEGAK 593 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P ++++A + +G+ LW + + VD + AK A + E D + + Sbjct: 594 PVEKEHVAGAL----TGL-WHKNLWQGEK----KAVDFYVAKGIAEGLFEKLGVSDQITY 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ + + + V+G+ HP I L FE L + S+ K Sbjct: 645 VQAEREGLHPGRTADVHLNGK-VIGFVAALHPVIEKELDLKETYV-FEFDLTDVMTSESK 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 K + + V RD+A +VDQ+I +G L +I + L+ D++VFDV++G+ + Sbjct: 703 DMKYTAIARFPA---VTRDIALVVDQNISSGQLERVIYEAGEDLLTDLSVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ + ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYLNPEQTLTEEEVTAVHTKVLKALEDTYQAVLR 803 >gi|171742774|ref|ZP_02918581.1| hypothetical protein BIFDEN_01888 [Bifidobacterium dentium ATCC 27678] gi|283456176|ref|YP_003360740.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium dentium Bd1] gi|171278388|gb|EDT46049.1| hypothetical protein BIFDEN_01888 [Bifidobacterium dentium ATCC 27678] gi|283102810|gb|ADB09916.1| pheT Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium dentium Bd1] Length = 867 Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 263/881 (29%), Positives = 421/881 (47%), Gaps = 98/881 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D+ I+ L P + G L L +P+++++ Sbjct: 123 YGHISNGMCASERELGLGDNHDGIILLRKYGFTPEEYEALKPGDDAMHLLHLDEPLLEIN 182 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSL 213 +TP+R RG+A + AA + +N P++ E +I+ ++D++ Sbjct: 183 ITPDRGYAFSYRGVAREYHHSTGAAYVDPAVALNGKAPVTQGLPEGTKTDIEVIVEDNNP 242 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C V G + PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 243 IHGVIGCDRYYARAVHGFDPASHTPNWMRRRLTRAGMRSISLAVDVTNYVMLDLGQPMHA 302 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D +I + VRRA GE + LD +++DLS ++++I RI IAG++GG Sbjct: 303 YDLDKIEGPIVVRRAVEGETLTTLDGKKHDLSVEDLLITDSPNGEHGSRILGIAGVMGGL 362 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + T ++L+E A +D ++IARS + I +++ RFERGVD Q + L+ Sbjct: 363 YGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMAAELM 422 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 + G S+ N R I F +EV R++G+D + IL +G SV G + Sbjct: 423 VKYGNGEPSEHPTDVNTVTPARTIHFKATEVARVAGLDTDVNTISGILTDIGCSVAGGGN 482 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEE+ R+ G D+I +P VE K L+ +Q R R + Sbjct: 483 GEFSVTAPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVEGKVGLTAEQLRKRQIA 541 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQREL-----EILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ E F + E+ EI NP++ D +R +++P L + Sbjct: 542 DELAEYGMVETLSYPFVGDEDYKYFAYDKDEIKKVSVEIANPLAGDRPFLRRAIMPTLAQ 601 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT-------------PEGQKYMA------------A 589 RN+ R + + +++E+ HVY D P ++ A A Sbjct: 602 TVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVRPTDEQLAALDAGLPDQPMHVA 661 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GI G+ +G G R WSD E R D A ++LD + E Sbjct: 662 GILTGNAVDTGWLGERRAVDWSDAVEAVHRISDRIGAG----------LTLDQPKAED-V 710 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P+ +HPGR+ + + + +G GE HP++ + GL FE+ L ++ + + Sbjct: 711 PAQWHPGRAARV-MAGDAFVGMVGELHPHVNEALGLPAHSAAFELDLTALFATLSGKPVQ 769 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L +I + ++D+ +FDVF G LGEG K Sbjct: 770 AKPI--STFPPVKQDLAFTVPNDVTAAALQQVIAEAAGDSLEDIKLFDVFTGDQLGEGVK 827 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A V + T +D + RIV+ K A LR+ Sbjct: 828 SLAYAVTFRAPDKTLTSEDSEAIRKRIVDE-ASKLGAQLRA 867 >gi|320529189|ref|ZP_08030281.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] gi|320138819|gb|EFW30709.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas artemidis F0399] Length = 811 Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 255/832 (30%), Positives = 408/832 (49%), Gaps = 51/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D D + E+I D LT G+ VE+ V E L + V +PD D Sbjct: 1 MQVSIKWLKDYVDIDETAEEIADRLTMAGIPVERIVRADEGLEKVITAHIEEVTPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R++ GK + +Q+V GA NV+ G + A G+ +P I + K+RG+ S GMM Sbjct: 61 HLRICRLNIGKEELLQIVTGAQNVQAGDIVPAALVGAVLPGGKKI-SKGKLRGVPSNGMM 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + + I LP D PVG + L L D +++ LT NR+DC V Sbjct: 120 CSAGELAIDTTGLPEEQVNGIYILPADTPVGIPAAQALGLDDVVLEFELTANRADCFSVV 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA GK L +I ++ + + L + ++ + LC+ F+ ++ VR Sbjct: 180 GIARE-VAALTGKMLRLPQIAVAESSAERAADL-VSINIAEEELCRRFSARVLRDVRVAP 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P WM +RL+ G+R+I+ +VD+TN+V L+ G P H +D ++ LT RRA +GE + Sbjct: 238 SPAWMTERLRGAGIRAINNVVDVTNFVMLELGQPLHAYDYDAVAGHTLTARRARAGELLH 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ D +VIA + +AGI+GG + + TT V++E A + +I R+ + Sbjct: 298 TLDDSSRVAVGDELVIADSEKPAGLAGIMGGLESEITEGTTSVILEAASFRSASIRRTAR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFM 407 LG+ ++S RFERGVD G + + L+ + A + +P F Sbjct: 358 RLGLHSESSGRFERGVDETGTVRAVTRAAQLLAEMGACKVAEGVVDVYPAPKEPAAFTFS 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++P + L LGF V E + + V+VPSWR DV D+ EE+ R+ Sbjct: 418 ARAVAERIGANIPGDWMASALRSLGFGVEEQELEIYRVAVPSWRGDVTLMEDIAEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ------ 520 YG D I + +P V S Q ++ LA+ M E +++SF S++ Sbjct: 478 YGYDNISAR-MPAGAVLQGHQ-SEMQDFVDTMRNALAALGMTEELSFSFTSEKTLDHLCV 535 Query: 521 ---SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-Y 576 S L +R + ILNP++ + +RT+LL +L+ RN+ R D +F+++ V + Sbjct: 536 PPDSPL----RRAIPILNPLTDEYPLIRTTLLTSILENAARNIARKNMDLRLFDIAPVFF 591 Query: 577 ENDTP----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + P ++ M G+ G S W E VD +D K A + Sbjct: 592 PKELPVTELAEERIMVVGLLTGRR----SPLAWDTNGE----MVDFYDIKGVAERFLAA- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 V + E G HPG++ K E+V GE HP + + FG+S +C FE+ Sbjct: 643 VGVQKYTVEPGTHFAMHPGKTAFFKKGREVV-AVLGEIHPTVAENFGISQNVCVFEM--- 698 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 + + R K + L RDLA +VD + A + ++I K + T+FD Sbjct: 699 DAAVLMRYRKKKSTIEPLPKYPAATRDLAVLVDAELSAAEIEHVIAKKGGKYFRSATLFD 758 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ GK + GKKS+A ++ Q + T D+++ I++ K+ +A LR Sbjct: 759 VYMGKQVDAGKKSMAFRLYFQSDEKTLTDEEVDAAFASILQAAEKELHAQLR 810 >gi|217967691|ref|YP_002353197.1| phenylalanyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] gi|217336790|gb|ACK42583.1| phenylalanyl-tRNA synthetase, beta subunit [Dictyoglomus turgidum DSM 6724] Length = 799 Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 250/814 (30%), Positives = 421/814 (51%), Gaps = 51/814 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR--EALSPFTIVKVLSVERNPDL 58 M + WL D+ ++ ++++ + L ++GL + R E + ++ S+ER+P Sbjct: 1 MLISYRWLMDYFKEEIPVKEVINALRNLGL-YATIQKRIGENWEKIIVGEIKSIERHPKS 59 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + ++ +DTG+ + ++V+ GA NV VG A PG I ++ VR+ G++S GM Sbjct: 60 ENLLVCEVDTGE-KNLKVITGAKNVFVGAKVPVALPGIEIL--GEVIGVREFEGVKSEGM 116 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE EL S+D IM LP D VG + D +++V + NR DC+ GIA + Sbjct: 117 LCSEYELEFSEDKEGIMILPEDFKVGTTFDSHFGKGDFLVEVEVPSNRGDCLSYLGIARE 176 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLD----------DSSLCKGFAMCCVKGVRN 227 L + PL+ E ++ K D+ D LC F + +K V+ Sbjct: 177 LSGY---------FNIPLNFEFKKVQEKNDIKIEDFAACEVLDFDLCPRFTLRFIKDVKI 227 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ R++ VGLRSI+ +VDITN+V L+ G P H +D + L VRRA +GEK Sbjct: 228 APSPLWLKWRIERVGLRSINNVVDITNFVMLETGQPLHAYDFDLLKGGKLIVRRAENGEK 287 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I+ ++ +E L D +VIA R +I GI+GGK +DNT DVL+E A + P+NI RS Sbjct: 288 IVLINGEERILDRDVLVIADAERAVAIGGIMGGKDTEINDNTKDVLLEAAYFLPVNIRRS 347 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + LG+ TD+ RFERGVD+ +L + +I + GG + I N VF Sbjct: 348 ARKLGLRTDASLRFERGVDIHRTSDILDYAAEMIRLIAGGNIAKDKIDINRGLPSLTKVF 407 Query: 407 MNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + E V ++ G + ++ + IL ++GF++ + FEV +PS+RQD++E+ DL+EE+ R Sbjct: 408 LRPERVNKVLGTTLKEDEIINILSKIGFNIKSQNPLFEVEIPSYRQDIKEEIDLIEEVAR 467 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG + I S PL + D +++ R ++ +L + + E +N+SF+S + G Sbjct: 468 FYGYNNIPSIPLQKGHIVDPP--LMEEIIERKIREILPNFGLYETINYSFMSIKDLEKVG 525 Query: 526 GGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEND 579 E L+I NP+S + S +RTSLLP LL N++R D I+E+ V Y+ D Sbjct: 526 ILSTEPFNSFLQISNPLSEENSILRTSLLPSLLNVAQININRQQRDVFIYEIGKVFYKKD 585 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 ++ + G S + W+ E R D +D K ++ E + + Sbjct: 586 NSYFEEKHLGILMTGESYKDP----WNIPYE--IRKADFYDLKGIIEAIFEKIWGREPI- 638 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 F+ S+ HP + G I EIV G+ GE +P I + + E+ LD + +K Sbjct: 639 FKKSEYSFMHPSKQGYIVFKDEIV-GFMGEVNPWITQNLDIRERVYFAEINLDKLNF-EK 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 R + K + ++P ++RDLA ++ + +P ++ I+K L+ + +FD++QG+ Sbjct: 697 PRPQYKSL----PIYPGIRRDLALLIPEEMPVESVEKEILKISGDLLKMIRIFDLYQGEK 752 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + +G KSV + T D ++ ++++I+ Sbjct: 753 VEKGYKSVTFSLFFLADDHTLEDKEVDEIINKIL 786 >gi|16330982|ref|NP_441710.1| phenylalanyl-tRNA synthetase subunit beta [Synechocystis sp. PCC 6803] gi|2500989|sp|P74296|SYFB_SYNY3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1653476|dbj|BAA18390.1| phenylalanyl-tRNA synthetase [Synechocystis sp. PCC 6803] Length = 810 Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 250/834 (29%), Positives = 434/834 (52%), Gaps = 54/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +++WL+ ++ ++S E++ + LT GLEVE++++R + + ++ +V+S E++P+ D Sbjct: 1 MRISVNWLQSLVELNLSPEELGELLTIAGLEVEEIEDRRSWAAGVVLGRVISREKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +VCGA NVR +L A GS +P+ ++ + K+RG++S+GM+ Sbjct: 61 KLSVCVVDIGTEEPSTIVCGAANVRADILVPVATLGSYLPKVDLKIKPAKLRGVKSSGMI 120 Query: 119 CSEKELMLSDDSASIMELP-IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL LS +S I P +D P G + L L D I+++S T NR+D + + G+A + Sbjct: 121 CSLAELGLSKESEGIHIFPDLDLPSGSPVGPLLGLDDVILEISPTANRADALSMVGVARE 180 Query: 178 LVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + A GKL I + +S + +P+ + + C + ++GV+ +P+W++Q Sbjct: 181 VAALTGGKLSLPEIKAVSVSDQDLPISVT----EPQACPTYVGTVIRGVKVGPSPDWLQQ 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL A G R I+ +VD+TNYV L+ G P H FD ++ + L VR A GEK++ Sbjct: 237 RLLAAGTRPINNVVDVTNYVLLEWGQPLHSFDQDKLQTLVGPEGFALGVRFAEEGEKLIT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+QE L P N+++ ++ + +IAG++GG D+NT ++++E AL+D + I +S K Sbjct: 297 LDDQERTLQPQNLLVTANDQPVAIAGVMGGAATEVDENTQNIVLETALFDGVTIRKSSKA 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV---- 405 + + ++S R+ERGV+ + L ++L+ L GGT A + I+ Sbjct: 357 INLRSESSTRYERGVNRCELEVALHRAIALMTELAGGTVVRQGKADQRQDRGEAIINLRL 416 Query: 406 ----FMNSEVKRLSGI-DVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQ-DVEE 455 + +V +GI ++ ED RIL LG + + D + V+VPS+RQ D+E Sbjct: 417 ERLQQLLGKVNTPTGIGNITAEDVERILTDLGCGLTRQSDSDTPVWAVTVPSYRQRDIER 476 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 + DL+EE+ R+YG D E LP + + S Q ++ + EVV++S Sbjct: 477 EIDLIEEVARLYGYDHF-CEQLPSNTIAGGLSPSYQAELA--LREACRGVGLTEVVHYSL 533 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + S E+ + NP+ A+ S +RT+LL GL+ A N + FEV V Sbjct: 534 VKPHGS--------EVMLANPLFAEYSALRTNLLDGLITAFANNQAQNNGALNAFEVGRV 585 Query: 576 Y-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + +N+ G+ AGI GS EG+ W + + + +DAK ++ + + Sbjct: 586 FWQNEGDIGEADHLAGICGGSQITEGT---WPQGG--KPQPMSWYDAKGLLEAIFQRLGA 640 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + P HPGR+ ++ + VLG FG+ HP + GL + + FE+ L Sbjct: 641 TVTYSGDHQDPR-LHPGRTALLSCNG-TVLGRFGQLHPQLRREKGLIDEVYAFEITL--T 696 Query: 695 PISQKKRTK---TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVF 750 P+ Q T+ T S V RDLA + L ++K L++ V +F Sbjct: 697 PLYQAMETQILGTPDFRPYSPYPAVARDLALYAPLELTVAELTQAMVKAGGDLLEQVELF 756 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D ++G+S+ G++S+A + + T D D+ L ++I E + K+ LRS Sbjct: 757 DEYRGQSVPAGQRSLAFSLAYRVGDRTLTDADVEPLHNQIREALTKQFAVSLRS 810 >gi|317495152|ref|ZP_07953522.1| phenylalanyl-tRNA synthetase [Gemella moribillum M424] gi|316914574|gb|EFV36050.1| phenylalanyl-tRNA synthetase [Gemella moribillum M424] Length = 797 Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 240/812 (29%), Positives = 419/812 (51%), Gaps = 47/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLK + + + + + + +T G+E+E VD E LS + V S E++PD + Sbjct: 1 MLVSYNWLKQYTNVEDNATDLAEKITRGGIEIEGVDYLAEELSNVVVGYVESKEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G+ + +Q+VCGAPNV G + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLSVCQVNVGEEENLQIVCGAPNVDAGQYVIVAKVGAKLP--GIKIKKTKLRGVESQGMI 118 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS KEL L+ I +G +S+ L L+D I+D+S+TPNR+D + +R Sbjct: 119 CSLKELGLNQSVIPKNYQEGIYIFGEKQELGADVSEVLGLNDYILDLSITPNRADALSMR 178 Query: 173 GIALDLVA----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G++ +L A A KE+ + ++ S+ +E S CK + +K + Sbjct: 179 GLSYELGALYNKAVTFNDKEVAENYEQTTLSVEVE-------SPSCKNYLGQVIKNIEVK 231 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P W++ RL + G+R I+ +VDITNYV L+ G P H FD + D + +R A GE + Sbjct: 232 DSPLWLQVRLMSSGIRPINNIVDITNYVLLEFGQPMHAFDKDLVGDKIVIRDAKEGEVLE 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VI + ++ G++GGK+ ++T ++++E A ++ +I R+ Sbjct: 292 TLDGVERKLQDTDLVITDGKQPIALGGVMGGKNTEVSESTKNIILESAYFNSSSIRRTSA 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 G+ +DS RFE+G+D + L+ V LIL L + + + R++ Sbjct: 352 AHGLRSDSSARFEKGIDSNMQLAALQRAVELILELYPNATVESSVGVVNKEQEREVAITT 411 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + GI + E+ + ILE L F V ++ V VP+ R D+ K DLVEE++RIYG Sbjct: 412 TYINNYLGIILSTEEIISILESLNFGVEVAAEELIVKVPTRRPDISIKQDLVEEVIRIYG 471 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D + S LP K L+ Q R ++R+ + + +N+S +S E+S F Sbjct: 472 YDNLAS-TLPKFSRTTKGGLTYTQRAVRDLRRLYVNAGFNDTINYSLVSDEESTSFTLKN 530 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPE 582 ++++L P++ S +R SL+PGLL G NV R D + E+ V+ +N P+ Sbjct: 531 HHKVKLLMPMTETHSTLRQSLIPGLLNTVGYNVARKQKDLKLVEIGRVFFGSGDDNVQPK 590 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFE 641 Y+ A + +G E + + D R +D + AK L V ++ LD + ++ Sbjct: 591 ETLYLGAAL----TGEERATKWLKD-----SRELDFYAAKG-YLEVALEYLGLDEKVTYK 640 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ + E + G GE HP + + GL N FE+ LD + +K + Sbjct: 641 KSTIDGMHPGRTAEVYLGVERI-GLIGEVHPLVAEKLGL-NRTYVFEINLDKVISEEKVK 698 Query: 702 TKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLG 759 K ++V +P + RD+A +VD + N I++V+ +LI +V +FD++ G L Sbjct: 699 PKYEEVTK----YPEITRDIAMLVDLEDEYQNIYNAIESVNSKLITNVELFDLYVGLELV 754 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 GKKS+A+ + + T D+++ + ++++ Sbjct: 755 AGKKSLALTITYSDKEKTLTDEEVTAVHEKVL 786 >gi|313890555|ref|ZP_07824183.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] gi|313121072|gb|EFR44183.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus pseudoporcinus SPIN 20026] Length = 801 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 250/829 (30%), Positives = 428/829 (51%), Gaps = 54/829 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ A LS + VLS + P+ Sbjct: 1 MLVSYKWLKELVDIDVTSAELAEKMSTTGIEVEGVEVPSAGLSKLVVGHVLSCQDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I K+RG+ES GM+C Sbjct: 61 LHLCQVDTGDDDPRQIVCGAPNVKAGINVIVALPGARIADNYKIKK-GKMRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEFAEGIQILPADAKPGDSIFPYLDLDDQIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE++ S +S+ I + I +S +A V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKEVHESSRKASDMISVAI-----ESENVLTYASRVVENVTIE 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + ++ + R+A GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFANHSIVARQARDGETL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L ++VIA + + ++AG++GGK D +T V++E A++D +I ++ Sbjct: 294 ITLDGEERQLISQDIVIAVNDKPVALAGVMGGKETEIDYGSTRVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G + A + P +++ Sbjct: 354 SRLNLRSESSSRFEKGVNYDTVLEALDFAAAMLQELAQGQVLAGRVQAGQLPTDPVQVLT 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ D +I +LGF + G+ F VSVP R D+ +ADLVEEI RI Sbjct: 414 TLDYVNVRLGTDLTYTDIEKIFAKLGFGLSGDASSFTVSVPRRRWDISIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAGELTASQALRRRVRTIAEGAGLTEIISYALTTPEKAQA 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F +L E++ P++ + S +R +++ G+L NV R + AI+E+ ++E E Sbjct: 529 FAIQPSKLTELMWPMTIERSALRQNIVSGMLDTVAYNVARKQKNLAIYEIGKIFEQ---E 585 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSLD 636 G + SG + + + + VD F AK D L V FV+ Sbjct: 586 GDPKRDLPNEIDTFAFALSGLVAEKDFQTQAQPVDFFYAKGILESLFDKLGVRVHFVAEK 645 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ + + + + G+ G+ HP + + + E+ L I Sbjct: 646 EM-------ASMHPGRTARLILNNQTI-GFIGQVHPQVASDYDIPETYVA-ELNLQII-- 694 Query: 697 SQKKRTKTKKVVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 ++ K+ +V + +S + V RD+A +VD ++ II N+ + +D + +FD++ Sbjct: 695 --EENMKSNQVFNEISKVPAVSRDIAILVDDSTSHQDIIRIIDNLGIKYLDTIKLFDIYA 752 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G + GKKS+A + Q +D+ RD+D+ MD+I +VK+ A +R Sbjct: 753 GAHIEPGKKSMAYSLRFQNPQDSLRDEDVAKYMDKITNALVKEAGAQVR 801 >gi|219666289|ref|YP_002456724.1| phenylalanyl-tRNA synthetase subunit beta [Desulfitobacterium hafniense DCB-2] gi|219536549|gb|ACL18288.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfitobacterium hafniense DCB-2] Length = 801 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 241/828 (29%), Positives = 423/828 (51%), Gaps = 53/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +L WL++++D + E + ++LT G+EV V+ + L + ++ +E +P+ D Sbjct: 1 MKVSLEWLREYVDIAQTAEDLAESLTRGGIEVGGVEYLNQGLEAVVVGEITRMEHHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++ G + +V GA N+ VG A PG+ +P N + + V K+RG+ES+GM+ Sbjct: 61 KLWICEVNLGD-RSTTIVTGAQNLLVGDRIPVALPGTTLP-NGVHIEVSKLRGVESSGML 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L I+ L + P+G + L D ++D+ L PNR DC+G+ Sbjct: 119 CSTEELHLDSGLGDPRSEGGILILEKETPLGATMDTVLGEGDCVLDLELYPNRPDCLGMV 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSES-----IPLEIKFD--LDDSSLCKGFAMCCVKGV 225 +A + VA+ G+ + P +E P + K LDD LC+ +A V+ V Sbjct: 179 NVARE-VASLTGE----ALHLPAWAEGSQGPDYPGDPKARIVLDDPGLCQRYAGLVVEDV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 +P WM++RLKA G+R IS +VDITNY+ L+ G P H FD I+ + VRRA +GE Sbjct: 234 NIEPSPEWMQKRLKAAGVRPISNIVDITNYIMLEMGQPLHAFDRDAIAGAVHVRRARAGE 293 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K++ LD+ E +L P+ ++IA D + +AG++GG ++ D+T + VE A + ++I R Sbjct: 294 KLVTLDDIERELDPEMLLIADDEKALGLAGVMGGLNSEITDSTKRIFVESAHFSSVSIRR 353 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + LG+ +++ RFE+GV+ G+ L + L++ L G +P + Sbjct: 354 TSRRLGLRSEASNRFEKGVNPHGVAATLGRVAELVIQLGAGKPVGFVEQAGQLPEPAAVS 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + L G + E+ +L+RL F + +EV +P++R D+ + DL+EE+ R Sbjct: 414 LTVEKTNSLLGTALTEEEITGVLKRLRFPYQEKDRGYEVQIPTYRSDITIEEDLIEEVAR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + G D+I + Q + +R + +Q R ++ +L + EV+ +SF + FG Sbjct: 474 LTGYDRIPTTLPQGDQTQGRR--TPEQEFKRTLRHLLVGLGLNEVMTYSFTRPDADRQFG 531 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT----- 580 + + +LNP+ ++S MRT+LLP +++ RN+ R D +FE+ +Y++ Sbjct: 532 DMDQAIPLLNPLREELSVMRTALLPSIMEIAARNISRRNLDIRLFEMGSIYKSKERPLVR 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P+ + ++A I SS R W E D + K ++E L Sbjct: 592 LPQEELHLAGVIWGKSS------RHWLTPVTE----YDFYTVKG----ILEEVAREFGLE 637 Query: 640 FESGAPS---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 F+ P+ HPGRS I + + +G GE HP + + L + FE+ ++ Sbjct: 638 FDYRLPNNQELTHPGRSADIYLNG-VKIGLMGEIHPALGKEWELERALI-FEL---AVAP 692 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 + +T + + ++RDLA +V + A ++ IK + L+ V +FDV+ G Sbjct: 693 MLEAGNRTIRAFSIPKFPAMQRDLAVVVPLEVSAQDVMKRIKELGGTLLVQVNIFDVYTG 752 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 K + E +KS+A + Q L T +D+++ L +++E + K+ A R Sbjct: 753 KPIPEDRKSLAFALKYQALDRTLKDEEVNALNQQVLEGIEKEFGAAWR 800 >gi|315222656|ref|ZP_07864545.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] gi|315188342|gb|EFU22068.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus anginosus F0211] Length = 801 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 252/825 (30%), Positives = 426/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV E++ + +++ G+EVE V + E LS + +V+S E + Sbjct: 1 MLVSYKWLKELVDVDVLSEELAEKMSTTGIEVEGVSSPAEGLSKIVVGEVISCEDVAETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ Q+VCGAPN+R G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEALRQIVCGAPNIRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFSDGIQILPEEAVPGDSVFPYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + L + + D + +A ++ V + Sbjct: 180 VAYE-VAAIYDKSVHFKDFPLLETQEQAGEQLSVAIETDKAPF---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR AC+GEK++ Sbjct: 236 PQWLQNLLMNAGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNQIVVREACAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD++E +L ++VIA + ++AG++GG + V++E A++D +I ++ Sbjct: 296 LDDEERELETSDLVIAVADKPVALAGVMGGAATEISSQSRRVVLEAAVFDGTSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G++L + L S+I L G T + I A + ++V Sbjct: 356 LNLRSESSSRFEKGINLATVTEALDAAASMIADLAGATVQAGIVSAGQLDTSDVEVVSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S+V R+ G ++ D + RLGF + G+ +KF VSVP R D+ +ADL EEI RIYG Sbjct: 416 SDVNRVLGTELTYTDIEDVFRRLGFGLTGDAEKFIVSVPRRRWDIHIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P L + + L+ Q R V+ V ++EV+ ++ + E++V F Sbjct: 476 YDKL---PATLPKGDGTAGQLTETQKLRRKVRTVAEGAGLIEVITYALTTPEKAVQFSTN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T Q+ Sbjct: 533 PSNLTELMWPMTVDRSVLRQNMVAGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPQEE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFE---S 642 + I + + G L ++K + VD F AK ++E L+ E + Sbjct: 592 LPTEINSFAFALTG---LVTEKDFQTPAVPVDFFYAKG----ILEALFDRLGLKVEYTAT 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 A + HPGR+ I ++V G+ G+ HP + + E Y+ I ++ ++ Sbjct: 645 QALAGMHPGRTATISLDGQVV-GFVGQVHPVTAKDYNIP------ETYVAEINLTAIEQV 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 K V ++ V RD+A ++ I +V I+ V RL D+ +FDVF G+ L Sbjct: 698 MQPAKPFVEITKFPAVTRDIALLLKAEISHKEVVEAIEAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +DT D+++ M++I +++ A +R Sbjct: 757 GLGMKSMAYTLTFQNPEDTLEDEEVARYMEKIQKSLEVTIGAEVR 801 >gi|154488652|ref|ZP_02029501.1| hypothetical protein BIFADO_01959 [Bifidobacterium adolescentis L2-32] gi|154082789|gb|EDN81834.1| hypothetical protein BIFADO_01959 [Bifidobacterium adolescentis L2-32] Length = 867 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 264/887 (29%), Positives = 418/887 (47%), Gaps = 110/887 (12%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + P + V+ P + I Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQVTGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY------------LELSDPII 157 G S GM SE+EL L D+ I+ L G +Y L L P++ Sbjct: 123 YGHISNGMCASERELGLGDNHDGIILL---RKYGFTPEEYEKLQPGDDAMHLLHLDQPLL 179 Query: 158 DVSLTPNRSDCIGVRGIALDL----------VAAGLGKLKEINISCPLSSESIPLEIKFD 207 ++++TP+R RG+A + A LGK + P ++S +I+ Sbjct: 180 EINITPDRGYAFSYRGVAREYHHSTGAVYTDPATALGKKAPVTQGLPEGAKS---DIEVI 236 Query: 208 LDDSSLCKGFAMC---CVKGVRN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDR 260 +DD + G C + VR + PNWMR+RL G+RSIS VD+TNYV LD Sbjct: 237 VDDKNPIHGVVGCDRYYARAVRGFDPASHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDL 296 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIA 314 G P H +D +I + VRRA GEK+ LD +++DLS ++++I R+ IA Sbjct: 297 GQPMHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGERGSRVLGIA 356 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 G++GG + T ++L+E A +D ++IARS + I +++ RFERGVD Q + Sbjct: 357 GVMGGLYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQ 416 Query: 375 HIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS 434 L++ G S+ N R I+F SEV R++G+D + IL +G + Sbjct: 417 MAAELLVKYGNGEPSEHPTDYNTVCNRRPILFKASEVARVAGLDTDVNTISDILTDIGCT 476 Query: 435 VIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 V G + +F V+ PSWR D+ E DLVEE+ R+ G D+I +P VE K L+ +Q Sbjct: 477 VAGGGNGEFSVTPPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVEGKVGLTAEQL 535 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSL 548 R R V LA M+E +++ F+ E F + +EI NP++ D +R + Sbjct: 536 RKRQVADELAEYGMVETLSYPFVGDEDYKNFALDADATKKVSVEIANPLAGDRPFLRRDI 595 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYEND-------------TPEGQKYMA------- 588 +P L + RN+ R + + +++E+ HVY D P ++ A Sbjct: 596 IPTLAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPD 655 Query: 589 -----AGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 AGI G+ SG G R WSD E R D AK ++LD Sbjct: 656 QPMHVAGILTGNAVDSGWMGDRRAVDWSDAVEAVQRISDRIGAK----------LTLDQP 705 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + E P+ +HPGR+ + + + +G GE HP++ + G FE+ L ++ + Sbjct: 706 KAED-VPAQWHPGRAARV-MAGDTFVGMVGELHPHVNEALGFPAHSAAFELNLTALFATL 763 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 + K + S+ PVK+DLAF V + A L I++ ++ + +FDV+ G Sbjct: 764 SGKPVQAKPI--STFPPVKQDLAFTVSTDVTAAELEKTIVEAAGNSLESIDLFDVYTGDQ 821 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 LGEG KS+A V + T +D + RIV + K A LR+ Sbjct: 822 LGEGLKSLAYAVTFRAEDKTLTSEDSEAIRKRIV-DAAAKLGAQLRA 867 >gi|258647817|ref|ZP_05735286.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella tannerae ATCC 51259] gi|260851635|gb|EEX71504.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella tannerae ATCC 51259] Length = 829 Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 254/841 (30%), Positives = 419/841 (49%), Gaps = 50/841 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK+++D D+S E++ LTSIGLEV+ ++ + L + +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLSAEEVAKALTSIGLEVDDIEEFQTIKGGLKGIVVGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D G IQ+VCGA N+ G + A G+ + E++ + K+RG+E Sbjct: 61 NSDHMHVCSVDLGAGSPIQIVCGAANIAAGQKVMVATIGTTLYDGEDSFKIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP +A VG + Y EL SD II V +TPNRSD Sbjct: 121 SFGMICAEDEIGVGTDQNGIIVLPAEAQVGTPAAKYYELESDYIIGVDITPNRSDACSHY 180 Query: 173 GIALDLVAAGLGKLKEINIS----CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + + + S ++ L+I +D C + + Sbjct: 181 GVARDLYAWLVRNGHKTALHRQDVAAFSVDNKDLDIAIQIDAPEGCPRYCAVTLSDCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKI 287 +P W++ RL ++G+R I+ +VDITNYV G P H FDA + + R CS GE Sbjct: 241 ESPTWLKNRLLSIGVRPINNIVDITNYVMFAYGQPLHCFDADMVKGNKVIVRTCSDGEPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ L ++ I + IAGI+GGK +G + T ++L E A ++P I +S Sbjct: 301 VTLDGEEHKLDGKDLAICNAEEPMCIAGILGGKGSGTYETTKNILFESAYFNPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-- 405 ++ I TD+ +RFERG+D +G I LK L L GG S N +P Sbjct: 361 RHHAISTDASFRFERGIDPEGQIYALKVAAMLAKELSGGKVSMEIKEVNPIKQPSHFTVD 420 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEIL 464 + + GI++P++ I+ L + E + ++ VPS+R DV+ D+VE+IL Sbjct: 421 LTYQYIHEVIGIEIPVDVIKEIVTSLEMKIAEETESGLQLLVPSYRVDVQRPCDVVEDIL 480 Query: 465 RIYGVDQI---KSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 RIYG + + K LT Q E+ R+ LQ + L + E++N S + Sbjct: 481 RIYGYNNVGLPKQMNTCLTIQGEEDRSYKLQN----LISEQLVGQGFNEIMNNSLTKESY 536 Query: 521 SVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + E + I+NP+S D++ +R +LL G +++ RNV+R ++ FE+ Y Sbjct: 537 YTELNAYKNEYLVHIMNPLSGDLNVLRQTLLFGGMESITRNVNRKTSNLRFFEIGKCYRV 596 Query: 577 ----ENDTPEGQKYMAAGIRKGSS----GIEGSGRL----WSDKSEERCRFVDLFDAKAD 624 +N +G++ A + + S G+ +G+ W+ +EE F +L D Sbjct: 597 DAKLQNAEGKGEEQTAKTVNRYSESYHLGLWITGKRVENNWAHPNEESSVF-ELKGYVQD 655 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 L + +S L+ E + + G ++K + VL FG I F L + Sbjct: 656 IL--VRLGLSFKGLKTEESDNNLFSKGL--VLKDRNDKVLLEFGVVARRINALFDLDQEV 711 Query: 685 CGFEVYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 +++ D + +K K K + V ++ V RDLA +VD+ + + I +R Sbjct: 712 YFADLHWDEL---MRKTAKNKVEFVEIAKYPSVSRDLALLVDKTVKFAEIERIAFEAERK 768 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ VT+FDV++GK+LG KKS A+ +Q T D +M++I++ + K+ NA L Sbjct: 769 LLKSVTLFDVYEGKNLGADKKSYAVNFTLQDENKTLNDKQTEAVMNKIIQQLQKQLNATL 828 Query: 803 R 803 R Sbjct: 829 R 829 >gi|313896325|ref|ZP_07829878.1| phenylalanine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] gi|312975124|gb|EFR40586.1| phenylalanine--tRNA ligase, beta subunit [Selenomonas sp. oral taxon 137 str. F0430] Length = 811 Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 258/832 (31%), Positives = 406/832 (48%), Gaps = 51/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D D + E+I D LT G+ VE+ V E L V V +PD D Sbjct: 1 MQVSIKWLKDYVDIDETAEEIADRLTMAGIPVERIVRADEGLEKVITAHVEEVTPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R++ GK + +Q+V GA NV+ G + A G+ +P I + K+RG+ S GMM Sbjct: 61 HLRICRLNIGKEELLQIVTGAQNVQAGDIVPAALVGAVLPGGKKI-SKGKLRGVPSNGMM 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + + I LP D PVG + L L D +++ LT NR+DC V Sbjct: 120 CSAGELAIDTTGLPEEQVNGIYILPADTPVGIPAAQALGLDDVVLEFELTANRADCFSVV 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA GK L +I + S+E + ++ + LC+ F+ + VR Sbjct: 180 GIARE-VAALTGKTLRLPQIAV-VESSAERAADLVSINIAEEELCRRFSARVLCDVRVAP 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P WM +RL+ G+R+I+ +VD+TN+V L+ G P H +D ++ LT RRA +GE + Sbjct: 238 SPAWMTERLRGAGIRAINNVVDVTNFVMLELGQPLHAYDYDAVAGHTLTARRARAGELLH 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ D +VIA + +AGI+GG + + TT V++E A + +I R+ + Sbjct: 298 TLDDSSRVAVGDELVIADSEKPAGLAGIMGGLESEITEGTTSVILEAASFRSASIRRTAR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFM 407 LG+ ++S RFERGVD G + + L+ + A + +P F Sbjct: 358 RLGLHSESSGRFERGVDETGTVRAVTRAAQLLAEMGACKVAEGVVDVYPAPEEPAAFTFS 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++P + L LGF V E + + V+VPSWR DV D+ EE+ R+ Sbjct: 418 ARAVAERIGANIPGDWMASALRSLGFGVEEQELETYRVAVPSWRGDVTLMEDIAEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ------ 520 YG D I + +P V S Q ++ LA+ M E +++SF S++ Sbjct: 478 YGYDNISAR-MPAGAVLQGHQ-SEMQDFVDTMRDALAALGMTEELSFSFTSEKTLDHLCV 535 Query: 521 ---SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-Y 576 S L +R + ILNP++ + +RT+LL +L+ RN+ R D +F+++ V + Sbjct: 536 PPDSPL----RRAIPILNPLTDEYPLIRTTLLTSILENAARNIARKNMDLRLFDIAPVFF 591 Query: 577 ENDTP----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + P ++ M AG+ G S W E VD +D K A + Sbjct: 592 PKELPVTELAEERIMVAGLFTGRR----SPLAWDTNGE----MVDFYDIKGVAERFLAA- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 V + E G HPG++ K E+V GE HP + + FG+S +C FE+ Sbjct: 643 VGVQKYTVEPGTHFAMHPGKTAFFKKGREVV-AVLGEIHPTVAENFGISQNVCVFEM--- 698 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 + + R K + L RDLA +VD + A + +I K + T+FD Sbjct: 699 DAAVLMRYRKKKSAIEPLPKYPAATRDLAVLVDAELSAAEIERVIAKKGGKYFRSATLFD 758 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ GK + GKKS+A ++ Q + T D+++ I++ K+ +A LR Sbjct: 759 VYMGKQVDAGKKSMAFRLHFQSDEKTLTDEEVDAAFSSILQAAEKELHAQLR 810 >gi|169829512|ref|YP_001699670.1| phenylalanyl-tRNA synthetase subunit beta [Lysinibacillus sphaericus C3-41] gi|168994000|gb|ACA41540.1| Phenylalanyl-tRNA synthetase beta chain [Lysinibacillus sphaericus C3-41] Length = 805 Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 254/819 (31%), Positives = 422/819 (51%), Gaps = 39/819 (4%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WLK++++T D++ E + + +T G+EV+ V D A+ + V+S +++P+ Sbjct: 1 MLVSLEWLKEYVNTQDLAPELLAEKITRSGIEVDAVIDRANAMDKVVVGYVVSKDKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + Q++CGAPNV G + A PG+ +P + + K+RG ES GM Sbjct: 61 DKLNICQVDVGEEEPQQIICGAPNVDAGQKVIVARPGAHLP-GGIKIKKAKLRGHESNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + S I LP DA VG L L D ++++ LTPNRSD + + Sbjct: 120 ICSLQELGIEGKLVPKAYSEGIYVLPEDAEVGTDALAILGLRDTVLELGLTPNRSDALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K NI+ ++E +K ++D + VK V+ +P Sbjct: 180 LGVAYEVGAILSEEVKYPNIAYQAANEKAEDLLKLRVEDMQANPMYVAKVVKNVKIGESP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA-SRISDVLTVRRACSGEKILAL 290 W++ RL A G+R + +VD+TNYV ++ G P H FD S + + VR+A GEKI L Sbjct: 240 MWLQNRLMAAGVRPHNNVVDVTNYVLMEYGQPLHAFDYDSLATGEIVVRKATDGEKITTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + +IAG++GG ++ D+TT V++E A +D + + ++ ++L Sbjct: 300 DDQERTLRASDLVITNGKEPVAIAGLMGGANSEVTDSTTTVVIESAYFDGLTVRQTSRHL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ +D+ RFE+GVD ++P + +L+ +L GG + CI + P ++V Sbjct: 360 GLRSDASARFEKGVDPNRVLPAAERAATLLAALAGGEVLEGTCIVDELDKTPARVVVSPD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G+ + +ED L ILERL F V + P+ RQD++ + D+VEEI R+YG Sbjct: 420 FINERLGMKIALEDMLSILERLKFGVEAANGLLIIDAPTRRQDIKIEEDIVEEIARLYGY 479 Query: 470 DQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D+I + P TQV +L+ Q+ R V+ + + + V +S S S F Sbjct: 480 DEIPMTLPEGATQV---GSLTSYQANRRVVRSYMEGAGLYQAVTYSLTSDALSQRFALKA 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + +L P+S D S +R SL+P L++A NV R A++E+ V+ + EGQ + Sbjct: 537 EPVTRLLMPMSEDRSTLRQSLVPHLIEAAAYNVARQADSVALYEIGSVFLGQSEEGQPFE 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + +G W D + + + VD F K VI + + FE Sbjct: 597 EEHLAAVLTG------KWLDHAWQGEKKAVDFFVLKGVIEGVIGKLGLGNRISFEKAQID 650 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I E V G G HP +G+ + E+ L ++ ++ + Sbjct: 651 GLHPGRTASILLDGEQV-GIIGGLHPAEEKAWGVKDTYI-MEMNLVAL-LNATNQEAPLA 707 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 + + RD+A I+D+ AG +V I +L+ D+ VFDV++G+ + +GKKSV Sbjct: 708 YTPVPRFPAMSRDIALIMDRITTAGEVVKAINEAGVKLLKDIRVFDVYEGEKMEQGKKSV 767 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A + T+ D + R L D E VV N VL++ Sbjct: 768 AFSL-------TYFDPE-RTLTD---EEVVAAHNKVLKA 795 >gi|119025945|ref|YP_909790.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium adolescentis ATCC 15703] gi|118765529|dbj|BAF39708.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium adolescentis ATCC 15703] Length = 867 Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 264/887 (29%), Positives = 417/887 (47%), Gaps = 110/887 (12%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + P + V+ P + I Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQVTGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY------------LELSDPII 157 G S GM SE+EL L D+ I+ L G +Y L L P++ Sbjct: 123 YGHISNGMCASERELGLGDNHDGIILL---RKYGFTPEEYEKLQPGDDAMHLLHLDQPLL 179 Query: 158 DVSLTPNRSDCIGVRGIALDL----------VAAGLGKLKEINISCPLSSESIPLEIKFD 207 ++++TP+R RG+A + A LGK + P E + +I+ Sbjct: 180 EINITPDRGYAFSYRGVAREYHHSTGAVYTDPATALGKKAPVTQGLP---EGVKSDIEVI 236 Query: 208 LDDSSLCKGFAMC---CVKGVRN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDR 260 +DD + G C + VR + PNWMR+RL G+RSIS VD+TNYV LD Sbjct: 237 VDDKNPIHGVVGCDRYYARAVRGFDPASHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDL 296 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIA 314 G P H +D +I + VRRA GEK+ LD +++DLS ++++I R+ IA Sbjct: 297 GQPMHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGERGSRVLGIA 356 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 G++GG + T ++L+E A +D ++IARS + I +++ RFERGVD Q + Sbjct: 357 GVMGGLYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQ 416 Query: 375 HIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS 434 L++ G S+ N R I+F SEV R++G+D + IL +G + Sbjct: 417 MAAELLVKYGNGEPSEHPTDYNTVCNRRPILFKASEVARVAGLDTDVNTISDILTDIGCT 476 Query: 435 VIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 V G + +F V+ PSWR D+ E DLVEE+ R+ G D+I +P VE K L+ +Q Sbjct: 477 VAGGGNGEFSVTPPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVEGKVGLTAEQL 535 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSL 548 R R V LA M+E +++ F+ E F + +EI NP++ D +R + Sbjct: 536 RKRQVADELAEYGMVETLSYPFVGDEDYKNFALDADATKKVSVEIANPLAGDRPFLRRDI 595 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYEND-------------TPEGQKYMA------- 588 +P L + RN+ R + + +++E+ HVY D P ++ A Sbjct: 596 IPTLAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPD 655 Query: 589 -----AGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 AGI G+ SG G R WSD E R D AK ++LD Sbjct: 656 QPMHVAGILTGNAVDSGWMGDRRAVDWSDAVEAVQRISDRIGAK----------LTLDQP 705 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + E P+ +HPGR+ + + + +G GE HP++ + G FE+ L ++ + Sbjct: 706 KAED-VPAQWHPGRAARV-MAGDTFVGMVGELHPHVNEALGFPAHSAAFELNLTALFATL 763 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 + K + S+ PVK+DLAF V + A L I++ ++ + +FDV+ G Sbjct: 764 SGKPVQAKPI--STFPPVKQDLAFTVSTDVTAAELEKTIVEAAGNSLESIDLFDVYTGDQ 821 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 LGEG KS+A V + T +D + RIV + K A LR+ Sbjct: 822 LGEGLKSLAYAVTFRAEDKTLTSEDSEAVRKRIV-DAAAKLGAQLRA 867 >gi|223043760|ref|ZP_03613803.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus capitis SK14] gi|222442857|gb|EEE48959.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus capitis SK14] Length = 800 Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 245/822 (29%), Positives = 423/822 (51%), Gaps = 41/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D ++ + + +T G+EV+ + D + + + V+S +PD D Sbjct: 1 MLISNEWLKDYVNVDQPVQDLAERITRTGIEVDDIIDYTKDIKNLVVGHVVSKAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEDEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGVKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P + G + L +D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKAFESGIYVFPTEVTPGTDALEALYFNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + S S +S E+ + + ++ V V +P Sbjct: 180 GTAYEVAALYQTEMTKPQTSSQESDKSASDELSVTVQNEDKVPYYSARIVHDVTIAPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD ++I S + VR+A S EK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVLLEYGQPLHMFDQNQIGSQKIEVRQANSNEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 N E DL ++VI + ++ G++GG + D T +V++E A++DP++I + + L Sbjct: 300 NAERDLLDSDIVITNGNEPIALGGVMGGDFSEVTDQTRNVVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D A ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYATGTVLKDRVAAGDLGAMVTPINITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ +D + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNQTIGFNLSDDDIVNIFEQLGFETQNQNGQLTVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + +L+ +Q +TR VK L + + + +S ISK+ + F R Sbjct: 480 EIPS-TLPVFEDVTSGSLTDRQYKTRTVKETLEGAGLDQAITYSLISKDHAKDFALQDRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L++A NV R +D ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIEAVAYNVARKNSDVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 Y+ +GI G + W K E VD + AK V E + D + +G Sbjct: 599 YL-SGILTG----QYVNHAWQSKKES----VDFYLAKGVVDRVAEKLNIKFD---YRAGQ 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I+ + E + G+ GE HP + L FE+ D+I R Sbjct: 647 IQGLHPGRTAIVSLNGEDI-GFIGELHPTLAAENDLKRTYV-FELNYDAI-----MRVSV 699 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + + + V RD+A V+ +PA L++ I N + +++D VFDV++G+ L EG Sbjct: 700 GYINYEPIPRFPGVSRDIALEVNHEVPASDLISTIHNNGEDILNDTLVFDVYEGEHLEEG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVAI++ ++T D+ + + D+I+E +++ A +R Sbjct: 760 KKSVAIRLNYLDTENTLTDERVTAVHDKILE-ALQQQGATIR 800 >gi|299535513|ref|ZP_07048834.1| phenylalanyl-tRNA synthetase beta chain [Lysinibacillus fusiformis ZC1] gi|298728713|gb|EFI69267.1| phenylalanyl-tRNA synthetase beta chain [Lysinibacillus fusiformis ZC1] Length = 805 Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 256/819 (31%), Positives = 419/819 (51%), Gaps = 39/819 (4%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WLKD+++T D++ E + + +T G+EV+ V D A+ + V+S E++P+ Sbjct: 1 MLVSLEWLKDYINTQDLAPELLAEKITRSGIEVDAVIDRANAMDKVVVGYVVSKEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + Q++CGAPNV G + A PG+ +P + + K+RG ES GM Sbjct: 61 DKLNICQVDVGEAEPQQIICGAPNVDAGQKVIVARPGAHLP-GGIKIKKAKLRGHESNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + S I LP DA VG L L D ++++ LTPNRSD + + Sbjct: 120 ICSLQELGIEGKLVPKAYSEGIFVLPADAEVGTDALAILGLRDTVLELGLTPNRSDALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K IS +SE +K ++D + VK V+ +P Sbjct: 180 LGVAYEVGAILSEEIKYPEISYQTASEKAQDYLKLHVEDLQANPMYVAKVVKNVKIGESP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA-SRISDVLTVRRACSGEKILAL 290 W++ RL A G+R + +VD+TNYV ++ G P H FD S + + VR+A GEKI L Sbjct: 240 MWLQNRLMAAGVRPHNNVVDVTNYVLMEYGQPLHAFDYDSLATGEIVVRKAIEGEKITTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + +IAG++GG ++ D+TT V++E A +D + + ++ ++L Sbjct: 300 DDQERTLKASDLVITNGKEPVAIAGVMGGANSEVTDSTTTVVIESAYFDGLTVRQTSRHL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ +D+ RFE+GVD ++P + +L+ L GG + C+ + P ++V Sbjct: 360 GLRSDASARFEKGVDPNRVLPAAERAAALLAELAGGEVLEGTCLVDELDKTPARVVVSPD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G+ + +ED L ILERL F V + P+ RQD++ + D+VEEI R+YG Sbjct: 420 FINERLGMKIALEDMLSILERLKFGVEAANGLLIIDAPTRRQDIKIEEDIVEEIARLYGY 479 Query: 470 DQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D+I + P TQV NLS Q+ R V+ + + + V +S S S F Sbjct: 480 DEIPMTLPEGATQV---GNLSPYQANRRVVRHYMEGAGLYQAVTYSLTSDALSQRFALKA 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + +L P+S + S +R SL+P L++A NV R A++E+ V+ + EGQ Y Sbjct: 537 EPVTRLLMPMSEERSTLRQSLIPHLIEAAAYNVARQADGVALYEIGSVFLGQSDEGQPYE 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + +G W D + + + VD F K VI + + F Sbjct: 597 EEHVAAVLTG------KWLDHAWQGEKKAVDFFVLKGIVEGVIGKLGLANRMTFVKSQVD 650 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I + V G G HP +G+ + E+ L ++ ++ + Sbjct: 651 GLHPGRTASILLDGKQV-GIIGGLHPAEQKAWGVKDTYV-MEMNLVAL-LNATTQEAPLA 707 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 + + RD+A I+D+ AG ++ I D +L+ D+ VFDV++G+ + GKKSV Sbjct: 708 YTPVPRFPAMSRDIALIMDRTTTAGEVMEAIDAADVKLLKDIRVFDVYEGEKMEPGKKSV 767 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A + T+ D + R L D E VV N VL++ Sbjct: 768 AFSL-------TYFDPE-RTLTD---EEVVAAHNKVLKA 795 >gi|23465635|ref|NP_696238.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium longum NCC2705] gi|227546234|ref|ZP_03976283.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium longum subsp. infantis ATCC 55813] gi|30316237|sp|Q8G5E8|SYFB_BIFLO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|23326308|gb|AAN24874.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium longum NCC2705] gi|227213215|gb|EEI81087.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 869 Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 265/871 (30%), Positives = 417/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR+ Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRAA 722 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 723 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 779 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 780 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 839 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 840 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|46191101|ref|ZP_00120533.2| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Bifidobacterium longum DJO10A] gi|189439681|ref|YP_001954762.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium longum DJO10A] gi|317481812|ref|ZP_07940840.1| phenylalanyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] gi|189428116|gb|ACD98264.1| Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium longum DJO10A] gi|316916749|gb|EFV38143.1| phenylalanyl-tRNA synthetase [Bifidobacterium sp. 12_1_47BFAA] Length = 867 Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 265/871 (30%), Positives = 417/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 63 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 64 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 123 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 182 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 183 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 242 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 243 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 302 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 303 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 362 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 363 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 422 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 423 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 482 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q R R V Sbjct: 483 GEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 541 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 542 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 601 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 602 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 661 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR+ Sbjct: 662 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRAA 720 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 721 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 777 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 778 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 837 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 838 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 867 >gi|260219593|emb|CBA26438.1| Phenylalanyl-tRNA synthetase beta chain [Curvibacter putative symbiont of Hydra magnipapillata] Length = 765 Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 236/769 (30%), Positives = 381/769 (49%), Gaps = 64/769 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F+ SWL+ + +S +++ +TLT GLEVE D + PFT + ++ E++P+ Sbjct: 1 MQFSESWLRTFCNPAISTDQLAETLTMAGLEVE--DLKPVAPPFTHIVVGEIKEAEQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN RVG L+G PPG ++ V K+R Sbjct: 59 ADRLRVCKVDVGQSELLNIVCGAPNARVGIRIPCALVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D +MELP+DAP+G + +YL+L D + + LTPN + C+ Sbjct: 117 GVESQGMLCSARELKLSEDHGGLMELPLDAPLGKNIREYLDLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A ++ A L + P ++ +I ++ + LC F+ ++ V Sbjct: 177 VYGVAREVSALTGAPL--LAPEFPSAAVAIQDKVAVKISAPGLCGRFSGRIIRNVNTKAK 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS+S LVDI+NYV + G PSH+FD +I L VR GE++ Sbjct: 235 TPQWMVDRLARCGQRSVSPLVDISNYVMFELGRPSHIFDLEKIHGGLDVRWGKQGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ L VIA +++S+AGI+GG D+T + VE A W P +IA + Sbjct: 295 LNGNTVTLDEKVGVIADAQQVESLAGIMGGDATAVSDDTRHIYVEAAFWWPKSIAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-----DICIARNITYKPRKI 404 TD+ +RFERGVD Q + ++ I LI+ +CG + + D +A P + Sbjct: 355 FNFSTDAGHRFERGVDPQQTVEHIERITQLIIDICGTSETQCGPVDDLVANVPAAAP--V 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + ++ G+ + L RL V V+ PS+R D++ + DL+EE+ Sbjct: 413 SLRVARAVKVIGMPLTQAQCADALRRLSLPVQESEGVITVTPPSFRFDLQIEEDLIEEVA 472 Query: 465 RIYGVDQIKSEP--LPLT---QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 R+ G + + P P+T + ED+R+ V+R LA+ E +N+SF+ + Sbjct: 473 RMVGYNNLPHTPPQAPITAKIRQEDQRS-------AFAVRRSLAALGYQETINFSFVEER 525 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 G +++LNPI++ MS MR+SL+ LL+ N+ R +FE+ V+ Sbjct: 526 WEHELAGNPNPIKLLNPIASQMSVMRSSLIGSLLQVLRFNLARKAPRVRVFELGRVFLRN 585 Query: 577 -----ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 + T EG Q +G+ G + W K + VD FD K D +++ Sbjct: 586 ASIKSTDSTVEGFDQPMRVSGLASGGA----DALQWGRKEQG----VDFFDVKGDVEALL 637 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P F G HPGR+ IK + V G+ GE HP + L+ FE+ Sbjct: 638 APL----KPEFVPGQHPALHPGRTAEIKLNGRSV-GFVGELHPKWRQSYELTTAPIVFEL 692 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 LD++ Q ++ ++ V+RD+A +V + LV ++ Sbjct: 693 ELDAVLARQVPVFQS-----VAKFQAVQRDVAVVVGDQVTHADLVAAVR 736 >gi|312133082|ref|YP_004000421.1| frsb [Bifidobacterium longum subsp. longum BBMN68] gi|322690748|ref|YP_004220318.1| phenylalanyl-tRNA synthase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] gi|311774076|gb|ADQ03564.1| FrsB [Bifidobacterium longum subsp. longum BBMN68] gi|320455604|dbj|BAJ66226.1| phenylalanyl-tRNA synthase beta subunit [Bifidobacterium longum subsp. longum JCM 1217] Length = 869 Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 264/871 (30%), Positives = 417/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEE+ R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEVARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR+ Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRAA 722 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 723 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 779 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 780 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 839 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 840 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|118602643|ref|YP_903858.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567582|gb|ABL02387.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 780 Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 241/820 (29%), Positives = 421/820 (51%), Gaps = 57/820 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M +WL++ ++ +V+ E + + LT GLEV V A + +++S +++PD D Sbjct: 1 MNILSNWLREWVNPNVTDEALAEQLTMAGLEVYGIVPIALAFKGVVVGQIISCDKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q++CGA N+R GL + A G+ P + + K +G+ES GM+ Sbjct: 61 KLNLCQVDVGEAENLQIICGAKNIRSGLKVIVATVGAKFP-GGVKIKKTKFKGVESFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL ++ EL DAP+G + YL L D +I++ +TPNR DC V G+A ++ Sbjct: 120 CSESELGMA-------ELEDDAPIGQNIKTYLNLDDHVIELDITPNRGDCFSVLGVAREV 172 Query: 179 VAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A N++ L + + I + D+ C + + G+ N V W Sbjct: 173 SA-------HYNLAFDLPEFEVFTQGDCVIGASVSDTQACPKYLTRTIIGIDNTVKTSKW 225 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M +L G + S +VDI N+V L+ G P H FD S+++ + VR A SGE++ L+ Sbjct: 226 MADKLVHSGQQLHSPVVDIINFVLLELGQPMHAFDLSKLTGDIKVRMAKSGEQLELLNET 285 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L D +VIA + +IAG++GG + +N++++L+E A ++P+ IA ++ G+ Sbjct: 286 TLKLKEDTLVIADSDSVLAIAGVMGGMTSSIKNNSSNILLESAFFEPVFIAGKARSYGLH 345 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNSEV 411 T+S RFERGVD + LI+ +CGG AS + CI +N + + I ++ Sbjct: 346 TESSLRFERGVDFNITELAMDRTTQLIVEICGGQASKVNACIDKNALPELKPITISQEKI 405 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVD 470 K++ G+++ + + LGF + + + + + PS+R D+ DL+EE+ R+YG D Sbjct: 406 KKILGLELDAKWIEQKFINLGFEISQQTNNSWTIIPPSFRFDIRIPVDLIEELARLYGYD 465 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++ + L L E + + + + +Y + + L +R EV+ +SFIS++ L + Sbjct: 466 KLPVQKLSL---ESNISTTSETNVDQYDIMQSLVNRGYQEVITYSFISEKYQNLISPDTK 522 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 ++ + NPISADMS MR+SL+ GLL+ N R D FE+ ++ + Q A Sbjct: 523 KIRLSNPISADMSIMRSSLISGLLQTVESNQRRGHTDARFFEIGLCFDGIKTDKQSNKLA 582 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRFESGAPSW 647 I G+ WS + +D FD KAD +E ++L + FE+ + Sbjct: 583 AIVTGNR----FDAQWSSDLQP----LDFFDIKAD----LESLLALTNAEFSFETAQHAA 630 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 G++ I ++E V G+ G P + LS FE+ L SI K++ + Sbjct: 631 LQKGQTAKIILNSEQV-GWIGALSPMVQKQLSLSKCYL-FEIDLVSI--------KSRNI 680 Query: 708 VHLSSLHPVK---RDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKK 763 +L P + RD+A ++D+ +P L+ +K + + DV +FDV+ G + GKK Sbjct: 681 AQYKALSPYQQSGRDIALVLDEAVPVAELIQSVKAMQQQYFVDVNLFDVYIGGVVESGKK 740 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SVA+ + Q L+ T + + +D ++ + + +A+LR Sbjct: 741 SVALSLTYQSLEGTLTEAQLNAKVDEVLVLMQAQYSAILR 780 >gi|322688756|ref|YP_004208490.1| phenylalanyl-tRNA synthase subunit beta [Bifidobacterium longum subsp. infantis 157F] gi|320460092|dbj|BAJ70712.1| phenylalanyl-tRNA synthase beta subunit [Bifidobacterium longum subsp. infantis 157F] Length = 869 Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 266/872 (30%), Positives = 418/872 (47%), Gaps = 80/872 (9%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPNAPVIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR+ Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRAA 722 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKTKKVVHLSSL 713 + ++ G+ GE HP + + G FE+ L ++ + K + K + S+ Sbjct: 723 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFAMLTGKPVQAKPI---STF 778 Query: 714 HPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 779 PPVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFR 838 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 839 SPSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|306822632|ref|ZP_07456010.1| phenylalanyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC 27679] gi|304554177|gb|EFM42086.1| phenylalanyl-tRNA synthetase beta subunit [Bifidobacterium dentium ATCC 27679] Length = 869 Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 262/881 (29%), Positives = 420/881 (47%), Gaps = 98/881 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQKNGKI 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D+ I+ L P + G L L +P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHDGIILLRKYGFTPEEYEALKPGDDAMHLLHLDEPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSL 213 +TP+R RG+A + AA + +N P++ E +I+ ++D++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAAYVDPAVALNGKAPVTQGLPEGTKTDIEVIVEDNNP 244 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C V G + PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVIGCDRYYARAVHGFDPASHTPNWMRRRLTRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D +I + VRRA GE + LD +++DLS ++++I RI IAG++GG Sbjct: 305 YDLDKIEGPIVVRRAVEGETLTTLDGKKHDLSVEDLLITDSPNGEHGSRILGIAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + T ++L+E A +D ++IARS + I +++ RFERGVD Q + L+ Sbjct: 365 YGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 + G S+ N R I F +EV R++G+D + IL +G SV G + Sbjct: 425 VKYGNGEPSEHPTDVNTVTPARTIHFKATEVARVAGLDTDVNTISGILTDIGCSVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEE+ R+ G D+I +P V K L+ +Q R R + Sbjct: 485 GEFSVTAPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVAGKVGLTAEQLRKRQIA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQREL-----EILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ E F + E+ EI NP++ D +R +++P L + Sbjct: 544 DELAEYGMVETLSYPFVGDEDYKYFAYDKDEIKKVSVEIANPLAGDRPFLRRAIMPTLAQ 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT-------------PEGQKYMA------------A 589 RN+ R + + +++E+ HVY D P ++ A A Sbjct: 604 TVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVRPTDEQLAALDAGLPDQPMHVA 663 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GI G+ +G G R WSD E R D A ++LD + E Sbjct: 664 GILTGNAVDTGWLGERRAVDWSDAVEAVHRISDRIGAG----------LTLDQPKAED-V 712 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P+ +HPGR+ + + + +G GE HP++ + GL FE+ L ++ + + Sbjct: 713 PAQWHPGRAARV-MAGDAFVGMVGELHPHVNEALGLPAHSAAFELDLTALFATLSGKPVQ 771 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L +I + ++D+ +FDVF G LGEG K Sbjct: 772 AKPI--STFPPVKQDLAFTVPNDVTAAALQQVIAEAAGDSLEDIKLFDVFTGDQLGEGVK 829 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A V + T +D + RIV+ K A LR+ Sbjct: 830 SLAYAVTFRAPDKTLTSEDSEAIRKRIVDE-ASKLGAQLRA 869 >gi|55821296|ref|YP_139738.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMG 18311] gi|55823209|ref|YP_141650.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus thermophilus CNRZ1066] gi|55737281|gb|AAV60923.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus thermophilus LMG 18311] gi|55739194|gb|AAV62835.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus thermophilus CNRZ1066] Length = 816 Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 255/831 (30%), Positives = 429/831 (51%), Gaps = 57/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E LS + VLS E P+ Sbjct: 15 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVKTPAEGLSKLVVGHVLSCEDVPETH 74 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 75 LHLCQVDTGDAEGPRQIVCGAPNITAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 133 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 134 CSLAELGLPDSIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 193 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 194 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVTTYASRVVENVTVQ 248 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR-ACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ + V R A GEK+ Sbjct: 249 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKLEESHIVARDAREGEKL 308 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + S+ GI+GG D+N+ +V++E A++D ++ ++ Sbjct: 309 VTLDGEERELTAEDIVITVADKPVSLGGIMGGASTEIDNNSKNVVLEAAVFDGKSVRKTS 368 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G+ + A ++ +P ++ Sbjct: 369 SRLNLRSESSSRFEKGVNNDTVLEALDFAAAMLQELANGSVLAGRVQAGSVDTEPVQVST 428 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + +LGF + G+ D+F VSVP R D+ +ADLVEEI RI Sbjct: 429 SLDYVNVRLGTELTFADIEDVFAKLGFGLTGDADRFTVSVPRRRWDISIQADLVEEIARI 488 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 489 YGY-----EKLPTTLPEAAGTSGELTKTQTLRRKVRTIAEGAGLTEIISYTLTTPEKAVE 543 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTP 581 F L E++ P++ D S +R +L+ G+L NV+R ++ AI+E+ V+E N P Sbjct: 544 FAATPSNLTELMWPMTVDRSALRQNLVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQNGNP 603 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-----VSLD 636 ++ + I + I SG + + + VD F AK +IE VS+D Sbjct: 604 --KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKG----IIEALFNKLEVSVD 655 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + A HPGR+ I + + G+ G+ HP +G+ E Y+ I + Sbjct: 656 YVATKDLAS--MHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINL 706 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDV 752 S + + V ++ V RD+A ++ I +++ I V RLI V +FDV Sbjct: 707 SAVEDALKPAQPFVEITKFPAVSRDIALLLKADITHQEVLDAIYSAGVKRLI-AVKLFDV 765 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 766 YTGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVEAEVR 816 >gi|82523881|emb|CAI78604.1| Phenylalanyl-tRNA synthetase beta subunit [uncultured delta proteobacterium] Length = 803 Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 248/821 (30%), Positives = 429/821 (52%), Gaps = 37/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +LSWLK ++D +S ++ + LT GLEVE ++ L + +V+S ++ + D Sbjct: 1 MIVSLSWLKQYIDISISPVELSECLTMAGLEVEGMEYPNNFLKDVIVAEVISTCKHINAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +QVVCGAPNVR G A PG+ +P NNM ++ K+RG S GM+ Sbjct: 61 HLMVCQVDNGA-EHVQVVCGAPNVRAGAKYPLALPGATMP-NNMTISRSKLRGEVSNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS KEL + D+ + IMEL G + + L++ I ++S+TPNR D + V G+A ++ Sbjct: 119 CSAKELNIGDNQSGIMELDYSYETGTSILKTMNLNEVIFELSVTPNRPDWLSVTGVAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K I + E I + + + LC+ +A ++G+ +P W+++RL Sbjct: 179 SALLNIPFKMPEIFVNETGEDIKILTQVTNEAPELCQRYAARVIEGITIKESPKWLKERL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL-ALDNQEYDL 297 K+VG+RSI+ +VDITN+V ++ G P H FD + + V + E + LD ++ L Sbjct: 239 KSVGIRSINNVVDITNFVLMELGQPLHAFDFDLLEEQRIVIKKAGNEFLFNTLDGAQHKL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P +++I + +IAGI+GG+++ TT V +E A ++P +I + K GI T+S Sbjct: 299 DPSSLMICDGNKPVAIAGIMGGENSEIHAGTTRVFLESAYFNPPDIRKISKQTGIRTESS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD ++ L LI L GG A + + I S V ++ G Sbjct: 359 YRFERGVDPDCVVFALNRAACLISELAGGRIAKGVIDCYPEPIQQSVIKLSTSSVNKMLG 418 Query: 417 IDVPIEDSLRILERLGFSV-IGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + + +D L+ LG + GE D V+ P++RQD++ DL+EE+ R++G D+I Sbjct: 419 LKLSSKDIRGYLQALGMYIDTGEDSDILLVTPPNFRQDIKRSVDLIEEVARMHGYDKIPV 478 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-----R 529 P T+V Q+ R + + + S ME++N+SFIS++ G + Sbjct: 479 T-FPTTEVIASPQYQHQELREKS-HQSMVSLGFMEIINYSFISRDSIANLGLSPDSELIK 536 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKY 586 +EI NP+S D S MRT+L+PG+L N++ + ++FE+ V+ N+ P+ ++ Sbjct: 537 AVEIKNPLSEDQSIMRTTLIPGILNTMRGNLNHKNLNLSLFEIGKVFIPTSNELPDEREM 596 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAP 645 + A I + + W K++ VD FD K ++ E +SL S E+ Sbjct: 597 LIALITGKRTNLS-----WMGKNDP----VDFFDIKGVLETLFEQ-MSLPSPELKENNNI 646 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKT 704 ++ ++ I + + V G G + F L F++ L + P + T Sbjct: 647 TYLSNSQNAAILINGKAV-GEIGMISKKVKAAFDLKQDAFIFQLDLAKLMPFALSIPT-- 703 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ-GKSLGEGK 762 H+ V+RD+A +VD+H+ ++ IKN+ +++ + +FD+F+ + +G+G+ Sbjct: 704 --FKHIFKFPAVERDIAIVVDEHVKWSEVLFAIKNIRISILEKIELFDIFRDAEKVGQGR 761 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI L + T D+++ +++I++ + K NA+LR Sbjct: 762 KSMAINFLFRSEIKTLNDNEVNKSINKIIQTLSKVINAILR 802 >gi|332670163|ref|YP_004453171.1| phenylalanyl-tRNA synthetase subunit beta [Cellulomonas fimi ATCC 484] gi|332339201|gb|AEE45784.1| phenylalanyl-tRNA synthetase, beta subunit [Cellulomonas fimi ATCC 484] Length = 854 Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 260/872 (29%), Positives = 414/872 (47%), Gaps = 89/872 (10%) Query: 2 KFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 + L+WL DH++ L E++ L +GLE E + P + +V VER P+ Sbjct: 3 RVPLTWLADHVELPAGLTAEQLAADLVRVGLEEEAIHAAAVTGPLVVGEV--VERTPEPQ 60 Query: 60 -----CAILRIDTG-KHQEIQ-----VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 R+D G +H E +VCGA N VG V A PG+ +P I + RK Sbjct: 61 KNGKTINWCRVDVGAEHNEPGGSPRGIVCGAHNFDVGDKVVVALPGAVLPGPFAIAS-RK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 G S GM+CS +EL L +D A I+ L +D PVG + L L D ++++++TP+R Sbjct: 120 TYGHVSDGMICSARELGLGEDHAGIIVLSTLGLDVPVGTDARELLGLGDEVLEINVTPDR 179 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG------FAM 219 C +RG+A + + + + ++ P + +LDD + G F Sbjct: 180 GYCFSMRGVAREYAHSTGARFTDRGLATPEQQAPASGGVAVELDDDAPVDGVPGADRFVA 239 Query: 220 CCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V+GVR N+ +P WM++RL G+R I VD+TNYV LD G P H +D ++++ + V Sbjct: 240 QVVRGVRANDPSPQWMQRRLTQAGMRPIGLAVDVTNYVMLDLGQPLHAYDLAKVAAPVVV 299 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIA-SDG-----RIQSIAGIIGGKHAGCDDNTTDVL 332 RRA GE+++ LD + L ++++I S G R+ +AG++GG + TTD+L Sbjct: 300 RRAQPGERLVTLDGVDRALDGEDLLITDSPGGVRASRVLGLAGVMGGGESEVGPETTDLL 359 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 VE A +DP+++AR+ + + +++ RFERGVD Q + +V L++ GGT D Sbjct: 360 VEAAHFDPVSVARTSRRHRLSSEAAKRFERGVDPQLPRVAVARVVELLVEHGGGTPDDAL 419 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQ 451 + T P + RL G+ P ++ LE++G + D+ V VPSWR Sbjct: 420 TDVDRTSPPPSVTLPLDLPGRLVGVPYPPQEVRDTLEQIGAEITDADDETVTVRVPSWRP 479 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ DLVEE+ R+ G DQI S P R L+ Q R V R LA +EV+ Sbjct: 480 DLAVPVDLVEEVARLRGYDQIPSTVPP---APTGRGLTTGQRLRRAVARSLAEAGFVEVL 536 Query: 512 NWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + F+S EQ G +R ++NP++ + +RT+LL LL A RNV R + D Sbjct: 537 TYPFVSTEQLDALGLPADDERRRAARLVNPLAESHAFLRTNLLVTLLDAARRNVGRGLTD 596 Query: 567 FAIFEVSHVYENDT--------PEG-----------------QKYMAAGIRKGS---SGI 598 A+FE+ V P G Q AG+ G+ +G Sbjct: 597 VAVFEIGLVTRPAADAAAAPRLPGGVRPTDDQLAALDAAVPAQPRRVAGVLAGAVEPAGW 656 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 GSGR D DA A A V + V ++ + +HPGR + T Sbjct: 657 WGSGRRG-----------DHTDAIAAARRVAD-VVGVELVVTADADHQPWHPGRCARLTT 704 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + ++G+ GE HPN++ GL FEV LD + + + + V S K Sbjct: 705 TDGTLVGHAGELHPNVVAAHGLPARAGAFEVDLDVLLAAASREPLQAQPV--SGFPVAKE 762 Query: 719 DLAFIVDQHIPAGTLVNIIKN------VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 D+A +V H+PA +++ ++ + +DV +FDV+ G + +G +S+A + ++ Sbjct: 763 DVALVVPAHVPASEVLDAVRTGASASPAGDVAEDVRLFDVYVGDQVPDGTRSLAFSLRLR 822 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + + + +V ++ A LR Sbjct: 823 AADRTLTAQETAGVRESVVAEAQRRFGATLRG 854 >gi|291517169|emb|CBK70785.1| phenylalanyl-tRNA synthetase beta subunit [Bifidobacterium longum subsp. longum F8] Length = 867 Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 264/871 (30%), Positives = 417/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 63 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 64 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 123 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 182 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 183 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 242 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 243 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 302 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 303 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSIEDLLITDSPNGERGSRILGLAGVMGGL 362 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 363 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 422 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 423 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 482 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEE+ R+ G DQI +P VE L+ Q R R V Sbjct: 483 GEFAVTAPSWRPDLNEPCDLVEEVARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 541 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 542 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 601 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 602 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 661 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR+ Sbjct: 662 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRAA 720 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 721 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 777 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 778 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 837 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 838 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 867 >gi|332525933|ref|ZP_08402074.1| phenylalanyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] gi|332109484|gb|EGJ10407.1| phenylalanyl-tRNA synthetase subunit beta [Rubrivivax benzoatilyticus JA2] Length = 795 Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 233/783 (29%), Positives = 384/783 (49%), Gaps = 44/783 (5%) Query: 8 LKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT---IVKVLSVERNPDLD-CAIL 63 +++ + + +++ D LT GLEVE + PF+ + ++L E +P D + Sbjct: 1 MREFCNPPLGTQQLADLLTMSGLEVESLA--PVAPPFSGIVVAEILEAEPHPQADRLRVC 58 Query: 64 RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGIESTGMMC 119 ++ G + +Q+VCGAPN R GL A G+ +P + V K+RG++S GM+C Sbjct: 59 KVSIGAAEPLQIVCGAPNARAGLKAPLATVGAVLPPGEDGKPFKIGVGKLRGVQSFGMLC 118 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S +EL ++D+ ++ELP DAPVG + +YL+L D + + LTPN + + V GIA ++ Sbjct: 119 SARELKIADEHGGLLELPADAPVGTDIREYLKLDDTVFTLKLTPNLAHALSVYGIAREVS 178 Query: 180 AAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 A L I+ P + +P+E++ + LC F+ V+GV P WM Sbjct: 179 ALTGTPLVTPAIAPVVPAHDQRLPVEVQ----AADLCGRFSGRVVRGVDTKARTPQWMVD 234 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL G RS+SALVDI+NYV + G PSH+FD +I + L VR GE + L+ Sbjct: 235 RLARCGQRSVSALVDISNYVMFEFGRPSHIFDLDKIHEKLVVRWGHEGETLKLLNGNTIT 294 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 + VIA +++S+AGI+GG D+T +V VE A W P + + TD+ Sbjct: 295 VDAKVGVIADAVQVESLAGIMGGDATAVSDDTKNVYVEAAFWWPEAVQGRSRRYNFSTDA 354 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +RFERGVD + ++ I LI+ +CGG A + K + +++G Sbjct: 355 GHRFERGVDPALTVEHIERITQLIIDICGGEAGPMDDQTLALPKAEPVTLRVERAAKVTG 414 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + + + RLG E + V+ PSWR D++ + DL+EE+ R+ G D++ + P Sbjct: 415 LPLTQPQCAEVFRRLGLQFSEEPGRLTVTPPSWRFDLKIEEDLIEEVARVVGYDKLPATP 474 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 P V + ++S + ++R +A+ E +N+SF+ + G +++LNP Sbjct: 475 -PQAPVTARVRPEARRSAS-ALQRAVAALDYQETINFSFVEERWERELAGNADPIKVLNP 532 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGI 591 ISA ++ MR+SL+ L+ N+ R +FE+ V+ D P +A + Sbjct: 533 ISAPLAVMRSSLIGSLVAVLRGNLARKTTRVRVFEIGRVFRRDPAAVDGPLAVAGVAQPL 592 Query: 592 RKGSSGIEGSGRL-WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 R G L W K R VD FD KAD ++ P + F + HP Sbjct: 593 RVAGLAYGGVAPLQWGQKE----RPVDFFDVKADVEALFAPRKPV----FVAAEHPALHP 644 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GR ++ V G+ GE HP + L FE L++ + ++ V L Sbjct: 645 GRCARVEVDGRAV-GFVGELHPKWRQAYELPQAPVVFE--LEAAALLER---PLPNVEPL 698 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQ----GKSLGEGKKSVA 766 S V RDLA +V + + L+ ++ D L+ T+FD+++ G L G++S+A Sbjct: 699 SRQQSVWRDLALVVGEGVRHDALIAALR-ADALVRQATLFDLYKPAQPGGGLAAGERSLA 757 Query: 767 IQV 769 +++ Sbjct: 758 VRL 760 >gi|89900135|ref|YP_522606.1| phenylalanyl-tRNA synthetase subunit beta [Rhodoferax ferrireducens T118] gi|89344872|gb|ABD69075.1| phenylalanyl-tRNA synthetase beta subunit [Rhodoferax ferrireducens T118] Length = 810 Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 253/838 (30%), Positives = 417/838 (49%), Gaps = 62/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL++ + +S E++ TLT GLEVE++ + PFT + V ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLSTEQLAQTLTMAGLEVEEL--KPVAPPFTRIVVGEIKEAAQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + + +VCGAPN RVG L+G PPG ++ V K+R Sbjct: 59 ADRLHVCQVDVGQAELLTIVCGAPNARVGIKVPCALVGAELPPGE--DGKPFLIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++EL DAP+G + ++L L D + + LTPN + C+ Sbjct: 117 GVESYGMLCSARELKLSNDHGGLLELRSDAPLGQDIREHLNLDDTLFTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A ++ A LK + S + L +K D LC F+ V+ V + Sbjct: 177 VYGVAREVAALTGAALKAPSFPVVKVSGADRLPVKVSAPD--LCGRFSGRIVRHVNPRAS 234 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P+WM +RL G RS++ALVDI+NYV + G PSH+FD +I L VR GE++ Sbjct: 235 TPDWMVERLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKPGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T ++ VE A W P IA + Sbjct: 295 LNGNTVTVDDQVGVIADEAHVESLAGIMGGDATAVSDDTQNIYVEAAFWWPKAIAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-----NITYKPRKI 404 TD+ +RFERGVD + ++ I L++ +C GTA C N+ P + Sbjct: 355 FNFSTDAGHRFERGVDPSQTVEHIERITQLVIDIC-GTADTTCGPMDDQQVNLPVAP-TV 412 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + ++ G+ + L RLG ++ V+ PS+R D++ + DL+EE+ Sbjct: 413 SLRVARASKVIGMALTQSQCADALTRLGLAISQSDGIITVAPPSYRFDLQIEEDLIEEVA 472 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+ G + + P PL + K Q+S ++R +A+ E +N+SF+ + Sbjct: 473 RMVGYNNLPQTP-PLAPITAKVRRETQRS-PFALRRSIAALGYQETINFSFVEERWEHEL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 +++LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 531 CANPNPIKLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAQRVRVFELGRVFLRDAAVKN 590 Query: 580 ---TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 T EG Q AG+ GS+ W K R VD FD K D ++ P Sbjct: 591 TDATVEGFDQPMRVAGLVCGSA----DALQWGHKE----RPVDFFDIKGDVEILLAPRRP 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + FES HPGR + + +G+ GE HP + L+ FE+ LD+ Sbjct: 643 V----FESAQHPAMHPGRCARVMLDG-VAIGFVGELHPKWRQAYDLAQAPLMFELDLDA- 696 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA-GTLVNIIKNVDR--LIDDVTVFD 751 + Q++ + K V + V RD+A +V + + + L++ I + L+ + +FD Sbjct: 697 -LLQREVSVFKGVAKHQA---VDRDIAVMVSEKLSSHADLMDAIWSAPTAGLLRNAVLFD 752 Query: 752 VFQGKSLGE-----GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +++ KS + +KS AI++ + T ++ I ++ +++ K A R+ Sbjct: 753 IYRPKSAKDLDAPGSEKSYAIRLTLNSDDATLTEEQIDNATQAVLASLLSKLGARQRT 810 >gi|221195485|ref|ZP_03568540.1| phenylalanyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] gi|221184672|gb|EEE17064.1| phenylalanyl-tRNA synthetase, beta subunit [Atopobium rimae ATCC 49626] Length = 825 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 255/850 (30%), Positives = 425/850 (50%), Gaps = 71/850 (8%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNP 56 M+ + WLK +D + LEK C G EVE V+ A L +++ +P Sbjct: 1 MRVSYEWLKTMVDIPENPLDLEKEC---ARTGTEVEAVERVGANLDHVVTARIVKKTPHP 57 Query: 57 DLDCAILR-IDTGKH--------QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 D D + +D G++ + +Q+VCGA N G V A G+ +P + + Sbjct: 58 DSDHMFVTLVDVGENNVDANGNPEPLQIVCGAQNFNEGDHIVTAMIGAVLP-GDFKIKKS 116 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 K+RG+ES GM CS +EL L D+ IM LP DAP+G +++YL +SD ++D +TPNR D Sbjct: 117 KLRGVESCGMNCSLRELGLGDEYDGIMILPNDAPIGVPITEYLGISDTVLDCEITPNRPD 176 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCP-LSSESIPLE---IKFDLDDSSLCKGFAMCCVK 223 C+ + G+A+++ A + +I P + E P + ++ D+SLC + V+ Sbjct: 177 CLSMTGMAVEVSAM---YDTDTHIELPSVKVEQGPHAADLVDVEVADTSLCSRYTARVVR 233 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 V+ +P W+ +R+ A G R I+ +VD+TNYV G P H FD ++++ + V Sbjct: 234 NVKIGASPEWLARRITAAGSRPINNVVDVTNYVMYLTGQPLHAFDLGKLTERDGKRHIVV 293 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVAL 337 R A GE I LD QE L+ D VI DG+ ++AG+IGG + D+ T DVL+E A Sbjct: 294 RAATDGEHITTLDGQERTLTSDMTVITDDGKTPIALAGVIGGLDSEIDETTHDVLLESAA 353 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 +D +I+R+ +NL +++++ R+ER VD G V +L CG +++C Sbjct: 354 FDHGHISRTSRNLDLMSEASIRYEREVDPHGCADVASIAAALFEECCG---AEVCPGIVD 410 Query: 398 TY----KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG-------FSVIGEYDKFEVSV 446 Y + IVF S + L+G + + L RLG ++ G V+V Sbjct: 411 VYPAPTEAVSIVFRPSRARALAGATIDDDFMFGRLSRLGCAIGEKTYAKDGSLASVTVTV 470 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P+ R D+ + DL+EE++R++G I + LP + L+ +Q R R + R L + Sbjct: 471 PTNRPDLTREVDLIEEVVRLWGEGDITAT-LPAAK-NHAGGLTAEQIRVRKIGRTLRALG 528 Query: 507 MMEVVNWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 + E ++ F S + G G + ++NP+ AD S MR SLLPGLL++ N+D Sbjct: 529 LNETKSYLFASSDDLAKLGMSEEGRGLPVRVINPLVADQSEMRRSLLPGLLRSVAYNLDH 588 Query: 563 AIADFAIFEVSHV---YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 + + A++E+ V +E + + AG+ GR D + D F Sbjct: 589 GVENIALYEIGRVLFGHEGKSQPDEPSFVAGVL--------CGRPAEDSWNMKWPAYDFF 640 Query: 620 DAKADALSVIEPFVSLDSLRFESGAP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 DAK ++E + + +RF P W PG + + +A+ V+G+ G HP L Sbjct: 641 DAKGVVEGLLE-ILRIPKVRFRVADPDTYGWLQPGCAAEV-LAADGVIGWVGTIHPLALQ 698 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 FG+ P+ FE+ S+ + Q+ K +V + + DLA +VD+ + L+ Sbjct: 699 NFGIEVPVVAFEL---SVAMLQRLARKDLPIVEPPTYPGISIDLAIVVDEKVTCEQLMQR 755 Query: 737 IKNV-DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + + +L+ DV +FDV++ + +GEGKKS+A + + T +++ ++VE V Sbjct: 756 LHSAGGKLLVDVRLFDVYRDRVRVGEGKKSMAFSLTYRADNRTLTSEEVEKTHTKLVEKV 815 Query: 795 VKKTNAVLRS 804 ++ T +RS Sbjct: 816 MRSTGGEVRS 825 >gi|322373152|ref|ZP_08047688.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] gi|321278194|gb|EFX55263.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. C150] Length = 802 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 249/835 (29%), Positives = 426/835 (51%), Gaps = 65/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 61 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 120 CSLAELGLPDSIIPKEFADGIQVLPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 179 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 180 GVAYE-VAAIYGK----SVHFPEKAVTEDSKPASDKISVAIESDKVATYASRVVENVTVQ 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D + R A GEK+ Sbjct: 235 SSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEDSRIVARDARDGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + ++AG++GG D+N+ +V++E A++D ++ ++ Sbjct: 295 VTLDGEERELTAEDIVITVADKPVALAGVMGGASTEIDNNSKNVVLESAVFDGKSVRKTS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L GT + A ++ +P ++ Sbjct: 355 SRLNLRSESSSRFEKGVNNDTVLEALDFAAAMLQELANGTVLAGRVQAGSVDTEPVQVST 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + +LGF + G+ +KF VSVP R D+ +ADLVEEI RI Sbjct: 415 SLDYVNVRLGTELTFADIEDVFAKLGFGLSGDAEKFTVSVPRRRWDIAIQADLVEEIARI 474 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R ++ + + E+++++ + E++V Sbjct: 475 YGY-----EKLPTTLPEAAGTAGELTKTQALRRKIRTIAEGAGLTEIISYALTTSEKAVE 529 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P++ D S +R +++ G+L NV+R ++ AI+E+ V+E Sbjct: 530 FAVTPSNLTELMWPMTVDRSALRQNMVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQKGNP 589 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIE 630 D P A I SG + + + VD F AK D L + Sbjct: 590 KEDLPNEINTFAFAI---------SGLVAEKDFQTKATPVDFFYAKGIVEALFDKLDLTV 640 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +V+ L + HPGR+ I + + G+ G+ HP +G+ E+ Sbjct: 641 DYVATKDL-------ASMHPGRTATIVLDGQTI-GFLGQVHPQTAKNYGIPETYVA-EIN 691 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVT 748 L+++ + + + V ++ V RD+A ++ I +++ I + V RL+ V Sbjct: 692 LNAVEAALQ---PDQPFVEITKFPAVSRDIALLLKAEITHQEVLDAINSAGVKRLV-AVK 747 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+ G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 748 LFDVYAGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVKAEVR 802 >gi|309389093|gb|ADO76973.1| phenylalanyl-tRNA synthetase, beta subunit [Halanaerobium praevalens DSM 2228] Length = 809 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 257/828 (31%), Positives = 437/828 (52%), Gaps = 46/828 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ + +WLK ++D D + + + LT GLEVE V+ E L I K+ ++++P+ D Sbjct: 1 MQISYNWLKKYIDIDFTPADLSEKLTMAGLEVEGVEYLGEGLEDIIIAKIEKIKKHPNAD 60 Query: 60 -CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 I + T K I VV GA NV+ G + +AP G+ +P M + K+RG S GM Sbjct: 61 KLVICMLKTKKEGNLIPVVTGASNVKSGQMVPFAPVGAKLP-GGMEIEEVKLRGQLSQGM 119 Query: 118 MCSEKELMLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 +CS+ EL L + A IM L AP+G + Y +L D I + LTPN + C+G+ G+A Sbjct: 120 ICSKDELGLQAEKAPGIMVLAKSAPLGFNFAKYKKLDDYIFKLDLTPNYARCLGMIGVAR 179 Query: 177 DLVAAGLGKLKEINISCPLS-SESIPL-----EIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 ++ L ++ I+ P+S +E+ L ++ ++ + LC+ + VK V+ + Sbjct: 180 EI--KSLYATEKKLITPPISFTEAEDLGNINDYLEVEIKNPELCQRYTARLVKNVQIKES 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P W+++RLKA G+R ++ +VDI+N+V ++ P H FD +I + + VRRA +GEK++ Sbjct: 238 PEWIKRRLKAAGIRPVNNVVDISNFVLMEYNQPLHTFDYDKIKEGKIIVRRAEAGEKMIT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L + +VI+ + ++ G++GG + TT+VL+E A ++P++I ++ K Sbjct: 298 LDETERSLDTEMLVISDPEKAVAVGGVMGGANTEVTAETTNVLIESAYFNPVSIRKTAKK 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN--ITYKPRKIVFM 407 L + +DS +RFERGVD++ I + L+ C G I N + Y+ +I Sbjct: 358 LAMHSDSSHRFERGVDIEKAIEANNRACQM-LAKCDGAKVVPGIIDNYPVKYEAAEITLK 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRI 466 V +L G+++ ++ L RLGF V V+VPS+R DVE+ ADLVEEI RI Sbjct: 417 TKRVNQLLGLELKEKEIKASLIRLGFEVESSAAGVCTVTVPSYRTDVEKSADLVEEIARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF 524 YG ++I S P+++ KR + Q+ R R +K++L + + EV+ +S +K+ Q++ Sbjct: 477 YGYNKIPS-TRPISKQRGKRT-AKQKFRAR-IKKILQAGGLDEVITYSLQAKKLYQALNL 533 Query: 525 GGGQ---RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 Q + + I NP++ + +RT+LLPG++ N R ++ +IFE+ V+ N Sbjct: 534 TKSQTYAKFVRIKNPLNESFAILRTTLLPGIINVLSENARRQESEMSIFEIGTVFRNS-- 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGR-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 Q + K S G+ G LW + + F+ K L ++ + + +F Sbjct: 592 -AQAEKPEELNKLSGGLFGQDNDLWQQGAP------NFFELKG-VLELLFARLQIRDYKF 643 Query: 641 ESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PIS 697 S + HPGR +IK LG+ GE HP + L FE+ D + ++ Sbjct: 644 SSDLEQTDFLHPGRKAVIKNETGQKLGFIGEIHPELASENNLPAGTSIFELDFDLLFELN 703 Query: 698 QKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVDRLI-DDVTVFDVFQG 755 K+ + +K+V +PV RDLA ++ I G + IK LI ++ +FD++QG Sbjct: 704 SKQNYQYEKLVK----YPVLVRDLALVMAADIAVGEIYTAIKKQGGLILKNLELFDIYQG 759 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G KSVA ++ Q T D ++ ++I +++ K+ +A +R Sbjct: 760 DQIKAGYKSVAFKLKFQAEDRTLTDQEVNQCFNQITKHLKKEYSAEIR 807 >gi|239622237|ref|ZP_04665268.1| phenylalanyl-tRNA synthetase beta chain protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|239514234|gb|EEQ54101.1| phenylalanyl-tRNA synthetase beta chain protein [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 869 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 268/881 (30%), Positives = 419/881 (47%), Gaps = 98/881 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKAIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEE+ R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEVARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R I + +++E+ HVY D+ P G Q A Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDSNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 590 GIRKG---SSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GI G G G R WSD E R A A+ + +P + D + Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGA---AIVLDQP--AADDV------ 712 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P +HPGR+ + ++ G+ GE HP + + G FE+ L ++ + + Sbjct: 713 PVQWHPGRAARVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQ 771 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKK Sbjct: 772 AKPI--STFPPVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKK 829 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A V+ + T +D + IV + A LR+ Sbjct: 830 SLAYAVVFRSPSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|66773847|sp|Q5LZ72|SYFB_STRT1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|66773849|sp|Q5M3S7|SYFB_STRT2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 802 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 255/831 (30%), Positives = 429/831 (51%), Gaps = 57/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVKTPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 61 LHLCQVDTGDAEGPRQIVCGAPNITAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 120 CSLAELGLPDSIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 179 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 180 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVTTYASRVVENVTVQ 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR-ACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ + V R A GEK+ Sbjct: 235 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKLEESHIVARDAREGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + S+ GI+GG D+N+ +V++E A++D ++ ++ Sbjct: 295 VTLDGEERELTAEDIVITVADKPVSLGGIMGGASTEIDNNSKNVVLEAAVFDGKSVRKTS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G+ + A ++ +P ++ Sbjct: 355 SRLNLRSESSSRFEKGVNNDTVLEALDFAAAMLQELANGSVLAGRVQAGSVDTEPVQVST 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + +LGF + G+ D+F VSVP R D+ +ADLVEEI RI Sbjct: 415 SLDYVNVRLGTELTFADIEDVFAKLGFGLTGDADRFTVSVPRRRWDISIQADLVEEIARI 474 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 475 YGY-----EKLPTTLPEAAGTSGELTKTQTLRRKVRTIAEGAGLTEIISYTLTTPEKAVE 529 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTP 581 F L E++ P++ D S +R +L+ G+L NV+R ++ AI+E+ V+E N P Sbjct: 530 FAATPSNLTELMWPMTVDRSALRQNLVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQNGNP 589 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-----VSLD 636 ++ + I + I SG + + + VD F AK +IE VS+D Sbjct: 590 --KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKG----IIEALFNKLEVSVD 641 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + A HPGR+ I + + G+ G+ HP +G+ E Y+ I + Sbjct: 642 YVATKDLAS--MHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINL 692 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDV 752 S + + V ++ V RD+A ++ I +++ I V RLI V +FDV Sbjct: 693 SAVEDALKPAQPFVEITKFPAVSRDIALLLKADITHQEVLDAIYSAGVKRLI-AVKLFDV 751 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 752 YTGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVEAEVR 802 >gi|308176907|ref|YP_003916313.1| phenylalanine--tRNA ligase subunit beta [Arthrobacter arilaitensis Re117] gi|307744370|emb|CBT75342.1| phenylalanine--tRNA ligase subunit beta [Arthrobacter arilaitensis Re117] Length = 847 Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 266/873 (30%), Positives = 409/873 (46%), Gaps = 96/873 (10%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL+++ + D S E + L +GLE E V + E P + +VLS+E+ Sbjct: 1 MRIPLSWLREYAQVPADASAEDVMADLVKVGLEEEDVHRPSDELSGPIVVGQVLSLEKEV 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G Q + +VCGA N G V PG+ +P Sbjct: 61 ASNGKTINWCQVRVVPEGTEQTLTGKGIDPTGVQGIVCGAHNFVEGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + +D IM L +D VG + L D Sbjct: 120 GDFKISPRKTYGHTSAGMIASSRELGIGEDHDGIMVLSNYGLDPEVGTDVLALFGLDDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 ++++TP+R C +RG+A + +A G +I + E+ L D++ Sbjct: 180 AEINVTPDRGYCFSIRGVAREYALATGTSFTDPASIVTVSDASEAGHEVV--LADAAPIY 237 Query: 216 GFAMCC------VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 G C V G+ P WM RL+ G+RSIS +VDI+NYV L+ G P H +D Sbjct: 238 GVPGCTRFVTREVTGIDPTRPTPRWMASRLQLAGMRSISLVVDISNYVMLELGAPLHFYD 297 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A +++ +TVRRA SGEK+ LD++E +LS ++++I + IAG++GG D+T Sbjct: 298 ADKLTSAITVRRANSGEKLTTLDDKERELSVEDLLITDESGAIGIAGVMGGAATEVSDST 357 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 + VL+E A +D ++I RS + + +++ RFERGVD + M + V+L++ L GGT Sbjct: 358 SRVLIEAAHFDTVSIGRSRRRHKLPSEASKRFERGVDPRIMQIAAQRAVNLLVELAGGTE 417 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPS 448 + +I L G+D E ++ LE +G +V + F V+ PS Sbjct: 418 TAKATDAGAVPADTQIQLPAGFAGALIGVDYTDEQTISALEGIGAAVQQNAEGFLVTAPS 477 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 WR D++ K DLVEE+ R+ G D+I P L R L+ QS+ R + + LA + Sbjct: 478 WRPDLDIKEDLVEEVARVIGYDKI---PATLPVAPPGRGLTRTQSQRRRLLQGLADAGLT 534 Query: 509 EVVNWSFISKEQSVLFGGGQRELEI-----LNPISADMSNMRTSLLPGLLKATGRNVDRA 563 EV+N+ F+S+ Q+ FG Q E+ NPIS + +RTSLLPGLL+ RN+ R Sbjct: 535 EVLNYPFVSQAQNATFGAAQAGTEVKAVSLANPISKEFRFLRTSLLPGLLETARRNIGRG 594 Query: 564 IADFAIFEVSHVY--------------------------ENDTPEGQKYMAAGIRKGSSG 597 D A++E V+ N P Q + A + G Sbjct: 595 FRDLALYEGGLVFLPGQQLGSSVLPPLGAKPSDEVLAELFNGVPN-QPWHLAAVFTGHEA 653 Query: 598 IEGSG---RLWSDKSEERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESGAPSWYHPG 651 +G R W + D DA AD L V L G+ +HPG Sbjct: 654 SAAAGFAPRAWD--------WADALDAAHNVADILGV--------ELEVAQGSHQAFHPG 697 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R +K + E+V GY GE HP +L L E LD+ + HLS Sbjct: 698 RVAALKLAGEVV-GYAGELHPQLLKDQDLPARTVAME--LDAAALMSAAPAVVVAQQHLS 754 Query: 712 SLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 S +D+A +VDQ + AG L + + L++D+ +FDV+QG+ + EGKKS+A + Sbjct: 755 SQPLATQDVALVVDQDVVAGDVLATLREGAGELLEDIALFDVYQGQGIEEGKKSLAFGLR 814 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D+ + V+ KK A R Sbjct: 815 FRAADRTLTADEASEVRAAAVDAAAKKFGATQR 847 >gi|42523140|ref|NP_968520.1| phenylalanyl-tRNA synthetase beta chain [Bdellovibrio bacteriovorus HD100] gi|66773914|sp|Q6MMJ1|SYFB_BDEBA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|39575345|emb|CAE79513.1| phenylalanyl-tRNA synthetase beta chain [Bdellovibrio bacteriovorus HD100] Length = 813 Score = 346 bits (888), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 250/832 (30%), Positives = 425/832 (51%), Gaps = 48/832 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEK---ICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP 56 MK +L WL D++D +K + + LT GLEVE++ NR + + I +L +++P Sbjct: 1 MKISLKWLHDYVDVTEFFQKPEVLAEALTRGGLEVEEITNRAKDFNHVVIGHILEKDKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + D ++ R+ TG+ Q+VCGA N + G + A PG+ +P N + +RG++S Sbjct: 61 NADKLSLCRVSTGEGVVHQIVCGAQNHKAGDRVIVALPGAVLP-GNFAIKKSAVRGVDSA 119 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS KEL L+ +S I LP DAPVG ++Y D ++ +T NR+DC+ G+A Sbjct: 120 GMLCSLKELGLATESEGIAILPADAPVGKAYAEYGGYDDVTFELKVTANRADCLSHFGLA 179 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ +LK + + +S EI D+ LC +A +KGV+ +P W++ Sbjct: 180 REVSTLFGKELKVPSSELKTNGKSSKSEIALDVKAFDLCPRYAGRFLKGVKVGPSPAWLK 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 RL++VG+ SI+ +VD+TNYV L+ G P H FDA+ I+ + V RA +GEK + LD E Sbjct: 240 ARLESVGMNSINNIVDVTNYVMLELGQPLHAFDAAFINGKKIIVDRAVAGEKFITLDGTE 299 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ + I +AG++GGK++G D+TT+V +E A + P++ ++ ++ GI T Sbjct: 300 IALNGAELTIRDVNHPVCLAGVVGGKNSGVSDSTTEVFLEAAYFLPMSARKTSRSHGIDT 359 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YRF RGVD G + L +LIL + GG A + P K ++ +K + Sbjct: 360 DSSYRFARGVDPDGTLRGLNRAAALILEVAGGEA--YADHHDFYPNPVKKAPVDITIKTV 417 Query: 415 S---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 S G + + ++RLG + + + F V P++R D+E+ DLVEE R+ G + Sbjct: 418 SDRLGYEAEEHKFVDFMKRLGCEINKKGETFTVLPPTFRFDIEQDMDLVEEYARLNGYEH 477 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI-SKEQSVLFG----- 525 I L ++ + +RT +L + VN++F+ SK Q G Sbjct: 478 IPEALPALAAAPSFQDKTFMLNRT--TSELLRGEGFQQAVNFAFVGSKAQKAFLGSLEAL 535 Query: 526 ------GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--E 577 ++E+ ILNP++ +M MR+SL GL K N +FE+ + + Sbjct: 536 KATGLAATEKEIRILNPLNEEMDVMRSSLSFGLFKNLNHNFHSGNMQGRLFEIGSTFFVK 595 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +D A G R G + + LW+ + + +++ KA A+ V+ +++ S Sbjct: 596 DDGS-----FAEGSRAGMAIWGRASNLWN----KSLDYPVVYELKA-AVEVLLKSLNISS 645 Query: 638 LRF-----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + +S P + H G+ + + V G+ G HP +L+ + P E+ LD Sbjct: 646 YTWVTPANKSEVPEFLHQGQFAQLLVEGKKV-GFIGTLHPLLLEDNKIRVPAALAELDLD 704 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG-TLVNIIKNVDRLIDDVTVFD 751 + Q + + + V S V+RD AF++ + + G L +I K L+ +V VFD Sbjct: 705 QLYKGQPRPYRIQSV---SKFPIVERDFAFVMPKALKVGDVLKDIRKAGAGLLLNVDVFD 761 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++G+ + GKKSVAI++ +Q T ++ I +I+E++ K + +R Sbjct: 762 LYEGEKMEAGKKSVAIRIWLQDKNATLQETQINETTTKILESLKKNFDLSVR 813 >gi|228477601|ref|ZP_04062234.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] gi|228250745|gb|EEK09943.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus salivarius SK126] Length = 802 Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 251/827 (30%), Positives = 430/827 (51%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 61 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 120 CSLAELGLPDSIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 179 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 180 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVATYASRVVENVNVQ 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR-ACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V R A GEK+ Sbjct: 235 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEDSHIVARDARDGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + ++AG++GG D+N+ +V++E A++D ++ ++ Sbjct: 295 VTLDGEERELTAEDIVITVADKPVALAGVMGGTSTEIDNNSKNVVLEAAVFDGKSVRKTS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+G++ ++ L +++ L GT + A ++ + ++ Sbjct: 355 SRLNLRSESSSRFEKGINNDTVLEALDFAAAMLQELANGTVLAGRVQAGSVDTETVQVST 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + +LGF + G+ DKF VSVP R D+ +ADLVEEI RI Sbjct: 415 SLDYVNVRLGTELTFADIEDVFAKLGFGLTGDADKFTVSVPRRRWDISIQADLVEEIARI 474 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 475 YGY-----EKLPTTLPEAAGTAGELTETQALRRKVRTIAEGAGLTEIISYALTTPEKAIE 529 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTP 581 F L E++ P++ D S +R +++ G+L NV+R ++ AI+E+ V+E N P Sbjct: 530 FAVTPTNLTELMWPMTVDRSALRQNMVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQNGNP 589 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 ++ + I + I SG + + + VD F AK ++ + VS+D + Sbjct: 590 --KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKGIVEALFDKLEVSVDYVPT 645 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 + A HPGR+ I + + G+ G+ HP +G+ E Y+ I +S + Sbjct: 646 KDLAS--MHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINLSAVE 696 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGK 756 + V ++ V RD+A ++ I +++ I + V RL+ V +FDV+ G+ Sbjct: 697 AALQPAQPFVEITKFPAVSRDIALLLKAEITHQEVLDAIYSAGVKRLV-AVKLFDVYAGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 756 KLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVEAEVR 802 >gi|50913951|ref|YP_059923.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10394] gi|50903025|gb|AAT86740.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10394] Length = 806 Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 427/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDKVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI +LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFNQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 594 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + V ++ + RD+A ++D+ + T+V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFVEITKFPAMTRDVALLLDREVSHQTIVTAIESAGVKRLT-KIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ G+KS+A + Q D D+++ M++I +++ ++ A +R Sbjct: 756 YEGATIQAGQKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLTEQVGAEVR 806 >gi|148244735|ref|YP_001219429.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] gi|146326562|dbj|BAF61705.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Vesicomyosocius okutanii HA] Length = 788 Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 242/818 (29%), Positives = 424/818 (51%), Gaps = 45/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF----TIVKVLSVERNP 56 M +WL++ ++ +V+ + + LT +GLEV+ + + + F + V+S ++P Sbjct: 1 MNILSNWLREWVNPNVTNRILVEHLTMVGLEVDSITS--IMPAFKGVVVVGHVVSYNKHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D + ++D G+ + +Q++CGA N+R GL V A GS + N + + + RG++S Sbjct: 59 YADKLNLCQVDVGEEKNLQIICGAKNIRSGLKVVVAMVGSQLL-NGLEIKIVNFRGVKSF 117 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 G++CSE EL +SD S I+EL + P+G + ++L + II++++TPNR DC V GIA Sbjct: 118 GIICSESELGMSDLSQGIVELEANTPIGKDIREHLNFDNYIIELNITPNRGDCFSVLGIA 177 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 ++ A N++ L + + I ++ D+ C + +K + N V Sbjct: 178 REVSA-------NYNLAFNLPVFEVLAQGDCVISTNVVDTKACPKYLTRSIKNIDNTVKT 230 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +L G + + +VDI N+V L+ G P HVFD S++ + VR A E I L Sbjct: 231 PKWMADKLVYSGQQLHTPVVDILNFVLLELGQPMHVFDLSKLKGNIEVRMAKCDEHIELL 290 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + L D +V+A + SIAG++G + +N+T++L+E A ++ ++I+ + ++ Sbjct: 291 NGTTIKLKEDILVVADSNLVLSIAGVMGNMSSSAQNNSTNILLESAFFELVSISGNARSY 350 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMN 408 G+ TDS RFERGVD + LI+ +CGG AS I CI ++ + + I Sbjct: 351 GLHTDSSLRFERGVDFNMTELAMDRATQLIVKICGGQASKISACIDKSALPQLKPITINQ 410 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIY 467 ++K++ G+++ + + LGF + + + + + PS+R D+ ADL+EE+ R+Y Sbjct: 411 EKIKKILGLELDAKWIEQKFTNLGFEISQQTNNSWTIIPPSFRFDIRIPADLIEELARLY 470 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D++ + L L E N + + +Y + + L +R E++ +SFIS++ L Sbjct: 471 GYDKLPVQKLSL---EANINSTSETDINQYNITQSLVNRGYQEIITYSFISEKYQNLISP 527 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 R++ + NPIS DMS MR+SL+PGLL+ N R D FE+ ++ + Q Sbjct: 528 DARKIRLSNPISIDMSIMRSSLIPGLLQTVESNQRRKHTDARFFEIGLCFDGIEVDEQSN 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 A I G+ +S + + +D FD KAD S++ ++ FESG + Sbjct: 588 KLAAIVTGNR--------FSAQWAANLQSLDFFDIKADLESLL--VLTGSEFYFESGQHA 637 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 G++ I + E V G+ G P + LS P C YL I ++ K K Sbjct: 638 ALQKGQTAQIILNDEQV-GWIGALSPMVQK--QLSLPDC----YLFEINLASIKSRNIVK 690 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSV 765 SS +RD+A ++D+ +P L+ IK++ + +V +FDV+ G + GKKSV Sbjct: 691 YKAFSSYQQSRRDIALVLDEVVPVAKLIQSIKSMQQQYFINVILFDVYIGDGIKLGKKSV 750 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A+ + Q L+ T + + +D ++ + + +A+LR Sbjct: 751 ALSLTYQSLEGTLTETQLNTKVDEVLVLMQTQYSAILR 788 >gi|302389953|ref|YP_003825774.1| phenylalanyl-tRNA synthetase beta subunit [Thermosediminibacter oceani DSM 16646] gi|302200581|gb|ADL08151.1| phenylalanyl-tRNA synthetase beta subunit [Thermosediminibacter oceani DSM 16646] Length = 799 Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 253/827 (30%), Positives = 416/827 (50%), Gaps = 53/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPDL 58 MK +L W++++++ D E++ LT G E ++ R+ S + +++ + ++PD Sbjct: 1 MKVSLKWMREYVNYDGRPEELARRLTMSGSNAESIEYPGRDIKS-VVVGEIIKIGKHPDS 59 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +++ G H+ +Q+V GA N++ G A PG+ I E + + V+ I+G+ES GM Sbjct: 60 DKLLVTKVNVG-HRVLQIVTGARNIKEGDRVAVALPGAVI-EGGIEIKVQSIKGLESQGM 117 Query: 118 MCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL L D ++ LP DAPVG + DY+ L D +ID +TPNR DC+ + Sbjct: 118 LCSAKELGLDDSGLPEDVKNGLLILPEDAPVGNDIKDYIGLEDVVIDFEITPNRPDCLSI 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + A L ++I+ S E +P + ++ LCK + +K V+ + Sbjct: 178 VGMAREAAATFNIPLNPLSINLKEESVEKVPDIVNVTVEAGDLCKRYIARIIKDVKIKPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P WM++RL+ G+R I+ +VDITNYV L+ G P H FD +++ + VRR GE I Sbjct: 238 PLWMQRRLQVCGIRPINNIVDITNYVMLELGQPLHAFDYDKLAGCSIIVRRGKKGETITT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA-LWDPINIARSGK 348 LD + ++ D +VIA ++AGI+GG T VL+E A W P NI R+ + Sbjct: 298 LDGKLREICEDTLVIADKKGPVALAGIMGGAETEVTSETRTVLLESANFWGP-NIRRTSR 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFM 407 +G+ T++ RFE+G+D + LI L G C+ PRK+ Sbjct: 357 KMGLRTEASQRFEKGLDPNLAAVAAERACELIERLGAGRVLKGCVDVYPEPVLPRKLPLR 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G ++ + ILERLG + E D+ V +P++R D+ ++ADL EEI RIY Sbjct: 417 VDRINALLGTEISRHQMIDILERLGIKSLEESDQTFVVIPTFRADITQEADLAEEIARIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + L+ Q T +K+ L E+ +SFIS Sbjct: 477 GYDNLPST-LP-GSIATCGKLNRNQKLTNEIKQTLMGCGFSEIYTYSFISPSAFDALRAP 534 Query: 528 Q-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 + R ++I+NP+ + S MRT+LLPG+L+ N+++ IFE+ VY P Sbjct: 535 EDHEVRRAVKIINPLGEEHSIMRTTLLPGILEVIKLNLNQKRESIRIFELGTVY---IPR 591 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--- 639 + K G+ D++ +D + K VIE + +R Sbjct: 592 QIPLKELPVEKKKLGVA-----ICDEN------LDFYYLKG----VIETLLLKLKIRGAV 636 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL-DSIPISQ 698 F G HPGR+ I EI G+ GE HP++++ +G+ + Y+ + Sbjct: 637 FYPGEHFSLHPGRTATISIDGEIA-GFIGEVHPDVMENYGMEDK----RAYVAELDLDLL 691 Query: 699 KKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 R++T+ K L RD+A +V++ + AG+++ IK ++++V +FDV++G Sbjct: 692 LDRSQTEVKFKPLPRFPAADRDVAIVVEEGVTAGSIMEAIKEAGGEVLENVELFDVYRGN 751 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EG KS+A + + T D++I L I E ++KK N LR Sbjct: 752 QIPEGYKSLAFSLTYRAKDRTLTDEEINRLHGNITECILKKFNGRLR 798 >gi|304317235|ref|YP_003852380.1| phenylalanyl-tRNA synthetase subunit beta [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778737|gb|ADL69296.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 793 Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 245/826 (29%), Positives = 428/826 (51%), Gaps = 56/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + SWLKD++D V +K+ D LT G +VE + + ++ I K++S+E++PD D Sbjct: 1 MLVSYSWLKDYVDVSVDAKKLADDLTMSGSKVETIKSYGNEINNVVIGKIISIEKHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + I +++Q++ GA N++VG A GS +P + + K+RG+ES GMMC Sbjct: 61 KLQVGIVDVGEEKLQIITGAQNIKVGDYIPVALHGSTLP-GGVKIKRGKLRGLESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S KEL L + I LP + P+G + LEL D +I+ +TPNR DC+ V G Sbjct: 120 SAKELGLDESLLPDYQRNGIFILP-ELPIGEDVKKALELDD-VIEFEITPNRPDCLSVVG 177 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA + A + I ++ P + DD LC + ++ + +P W Sbjct: 178 IARETAATYRKSYRMPEIKLSEVADKNPANVTIKADD--LCFRYVARVIRNAKIGPSPIW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL G+R I+ +VD+TNYV ++ G P H FD ++ + + VRRA GEK++ LD+ Sbjct: 236 MQMRLLKAGIRPINNIVDVTNYVMMELGQPLHAFDLDKVKNRHIIVRRAKDGEKLVTLDD 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L + +VIA + + +AG++GG++ D+T ++L+E A + NI + K LG+ Sbjct: 296 KERTLDSEMLVIADEEKAIGLAGVMGGQNTEITDDTVNILIESANFKGSNIRYTSKKLGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNS 409 +++ RFE+G+D + + L+ L GG + + ++ KP + + + Sbjct: 356 RSEASSRFEKGLDPEITVLACNRAAQLMAELSGGEILNGIV--DVYPKPIEEKVLSVRHK 413 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ +L G ++ IE+ IL L F VI + + V VP++R D+E +AD+ EEI R+YG Sbjct: 414 KINKLLGTNLTIEEMKNILTFLDFGVICDGENLVVKVPAFRSDIEGEADIAEEIGRMYGY 473 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------KEQ 520 + I+ L TQ+ + +Q VK V S + EV+ SF+ + Sbjct: 474 NNIEDTLLKGTQITAGVK-TREQKLEDLVKEVFLSCGLNEVITTSFMGMKDLDKINLPDD 532 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 S L ++ ++I+NP+ D MRT+LLP +L N R ++DF FE+S V+ Sbjct: 533 SPL----RKAVKIMNPLGEDQGYMRTTLLPSMLNVVYTNYSRKVSDFKAFEISRVF---I 585 Query: 581 PEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 P+ + + ++ G+ G +D K + V+ +++ ++ Sbjct: 586 PKSLPLEELPVEVKTAVIGMYGHD-------------IDFLTLKG-VIEVLLDVLNVSNV 631 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ + YHPGRS I + + G FGE +P+I + + ++ + E+ L+ + Sbjct: 632 KYVRSENTLYHPGRSADIIVDGKCI-GVFGEINPDIEENYDINREVYVAELNLE---LLF 687 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 K +K L V+RD+A +VD+ I + +II+ +L+DDV +FDV+ G++ Sbjct: 688 KHADDDRKYKPLPKYPAVERDIAVLVDKDIFVSDIESIIRETGGKLVDDVKLFDVYTGEN 747 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + E KKSVA + + + T D++++ + D+I+ + +K A LR Sbjct: 748 IPEDKKSVAYSIWYRSYERTLTDEEVKEVHDKIIRKLNEKLGAQLR 793 >gi|296453796|ref|YP_003660939.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium longum subsp. longum JDM301] gi|296183227|gb|ADH00109.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium longum subsp. longum JDM301] Length = 869 Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 265/871 (30%), Positives = 416/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D+ I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHNGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + AA +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAAYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKVIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY D T E + AG+ + + Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPNAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRVA 722 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 723 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 779 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 780 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 839 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 840 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|251782147|ref|YP_002996449.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390776|dbj|BAH81235.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus dysgalactiae subsp. equisimilis GGS_124] Length = 806 Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 246/831 (29%), Positives = 427/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++EVA++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEVAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-- 580 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E + Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 581 ----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 P + A I G + + + + VD + AK + L + ++L Sbjct: 594 KENLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKGN-LDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|66773882|sp|Q5XCX3|SYFB_STRP6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 801 Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 244/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIASDK-----VLTYASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI +LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFADIQRIFNQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + V ++ + RD+A ++D+ + T+V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFVEITKFPAMTRDVALLLDREVSHQTIVTAIESAGVKRLT-KIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ G+KS+A + Q D D+++ M++I +++ ++ A +R Sbjct: 751 YEGATIQAGQKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLTEQVGAEVR 801 >gi|322385133|ref|ZP_08058780.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] gi|321270757|gb|EFX53670.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus cristatus ATCC 51100] Length = 837 Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 254/826 (30%), Positives = 424/826 (51%), Gaps = 48/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + E LS + +VLS E PD Sbjct: 37 MLVSYKWLKELVDLDVTSAELAEKMSTTGIEVEGVSSPAEGLSKIVVGEVLSCEDVPDTH 96 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 97 LHLCQVNVGEDEPRQIVCGAPNVRAGIKVMVAVPGARIADNYKIKK-GKIRGLESLGMIC 155 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 156 SLGELGISDSVVPKEFADGIQILPDNAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 215 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + + + + +A + V + Sbjct: 216 VAHE-VAAIYDKSVQFKEFPLTEGDKEAAASLSVAIEGEKAPF---YAARILDNVTIAPS 271 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 272 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 331 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++VI + ++AG++GG D +T V++E A+++ +I ++ Sbjct: 332 LDGEERDLEVGDLVITVADKPVALAGVMGGAATEISDKSTRVVLEAAVFNGKSIRKTSSR 391 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 LG+ ++S RFE+G++L + L S+I L G T + I A + +++ Sbjct: 392 LGLRSESSSRFEKGINLATVPEALDAAASMIADLAGATVHAGIVQAGQLDTTDKQVSTSL 451 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S+V R+ G D+ D I RL F + G D F VSVP+ R D+ ADL EEI RIYG Sbjct: 452 SDVNRVLGTDLTYADIEDIFRRLVFGLSGSADSFTVSVPARRWDISIPADLYEEIARIYG 511 Query: 469 VDQIKSEPLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P+ L Q L+ Q R V+ V + E+++++ + E++V F Sbjct: 512 YDRL---PVSLPQDAGTAGELTATQKLRRKVRTVAEGAGLTEIISYALTTPEKAVEFSLN 568 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ + S +R ++L G+L NV R D A++E+ ++E T ++ Sbjct: 569 PTNLTELMWPMTTERSVLRQNMLSGMLDTVSYNVARKNKDLALYEIGKIFEQ-TGNPKEE 627 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKA------DALSVIEPFVSLDSLR 639 + I + + G L S+K + VD F AK D L + + + D L+ Sbjct: 628 LPNEINSFAFALTG---LVSEKDFQTPATPVDFFHAKGVVEALFDRLGLEADYQATDQLK 684 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 HPGR+ +I + V GY G+ HP + + E+ L +I S + Sbjct: 685 -------SLHPGRTALISIKGQPV-GYVGQVHPVTAKAYDIPETYVA-ELNLTAIEASLE 735 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKS 757 + ++ V RD+A ++ I +V I+ V RL D+ +FD+F G+ Sbjct: 736 PE---QPFTEITKFPAVTRDVALLLKAEISHRQVVEAIQAAGVKRLT-DIKLFDIFSGEK 791 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ DD++ M++I +++ + A +R Sbjct: 792 LGVGLKSMAYTLTFQNPEDSLTDDEVAKYMEKIQKSLEENVGAEVR 837 >gi|116628027|ref|YP_820646.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus thermophilus LMD-9] gi|116101304|gb|ABJ66450.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus thermophilus LMD-9] Length = 816 Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 253/827 (30%), Positives = 428/827 (51%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E LS + VLS E P+ Sbjct: 15 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVKTPAEGLSKLVVGHVLSCEDVPETH 74 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 75 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 133 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 134 CSLAELGLPDSIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 193 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 194 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVTTYASRVVENVTVQ 248 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR-ACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ + V R A GEK+ Sbjct: 249 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKLEESHIVARDAREGEKL 308 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + S+ GI+GG D+N+ +V++E A++D ++ ++ Sbjct: 309 VTLDGEERELTAEDIVITVADKPVSLGGIMGGASTEIDNNSKNVVLEAAVFDGKSVRKTS 368 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G+ + A ++ +P ++ Sbjct: 369 SRLNLRSESSSRFEKGVNNDTVLEALDFAAAMLQELANGSVLAGRVQAGSVDTEPVQVST 428 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + +LGF + G+ D+F VSVP R D+ +ADLVEEI RI Sbjct: 429 SLDYVNVRLGTELTFADIEDVFAKLGFGLTGDADRFTVSVPRRRWDISIQADLVEEIARI 488 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 489 YGY-----EKLPTTLPEAAGTSGELTKTQTLRRKVRTIAEGAGLTEIISYTLTTPEKAVE 543 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTP 581 F L E++ P++ D S +R +L+ G+L NV+R ++ AI+E+ V+E N P Sbjct: 544 FAATPSNLTELMWPMTVDRSALRQNLVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQNGNP 603 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 ++ + I + I SG + + + VD F AK ++ + VS+D + Sbjct: 604 --KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKGIIEALFKKLEVSVDYVAT 659 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 + A HPGR+ I + + G+ G+ HP +G+ E Y+ I +S + Sbjct: 660 KDLAS--MHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINLSAVE 710 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGK 756 + V ++ V RD+A ++ I +++ I V LI V +FDV+ G+ Sbjct: 711 DALKPAQPFVEITKFPAVSRDIALLLKADITHQEVLDAIYSAGVKHLI-AVKLFDVYAGE 769 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 770 KLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVEAEVR 816 >gi|331265680|ref|YP_004325310.1| phenylalanyl-tRNA synthetase, beta chain [Streptococcus oralis Uo5] gi|326682352|emb|CBY99969.1| phenylalanyl-tRNA synthetase, beta chain [Streptococcus oralis Uo5] Length = 801 Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 428/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESSAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++S + + L + + D + +A + V + Sbjct: 180 VAYE-VAAIYDKAVSFKEFSLSETDQAAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ +N++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLEANDLVITVADKPVALAGVMGGQATEISENSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFDRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDMALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 VGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|167629875|ref|YP_001680374.1| phenylalanyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] gi|167592615|gb|ABZ84363.1| phenylalanyl-tRNA synthetase, beta subunit [Heliobacterium modesticaldum Ice1] Length = 816 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 251/836 (30%), Positives = 418/836 (50%), Gaps = 53/836 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ ++ WL D+++ + ++ + LT G+ VE V R + L + K++ + ++P+ D Sbjct: 1 MRVSIDWLGDYVNAGLEAAELGEKLTRSGIAVENVLYRNKGLDKVVVGKIVEMIKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +DTG I +V GA NVRVG A PG+ +P+ + + +RGI S+GM+ Sbjct: 61 RLWICTVDTGAGVRI-IVTGAQNVRVGQKVPVALPGAHLPKG-VKIEESVLRGIPSSGML 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L + D I+ L DA G +S L L D ++++ LTPNR+DC+ V Sbjct: 119 CSAEELGLEEKTIAPEDREGILILSDDAATGQPVSAALGLDDAVLELELTPNRADCLAVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP-LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A L+ ++ E ++K +++S LC +A +R +P Sbjct: 179 NVAREVAAITGADLRLPEVTVSEKGEGCAEAQVKVTIEESDLCGRYAARLFTNLRLGPSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM+QRL+A G+R I+ +VDITNYV L+ G+P H FD RI D + VRRA SGEK++ L Sbjct: 239 TWMQQRLQAAGMRPINNIVDITNYVMLELGHPLHAFDYDRIKDGHIIVRRARSGEKLVTL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE +L+P+N+VIA + +AG++GG ++ TT VL+E A + P NI R+ + L Sbjct: 299 DGQERELNPENLVIADPEKAVGLAGVMGGLNSEISAGTTTVLLEAAHFHPANIRRTARQL 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KPRKIVF 406 G+ +++ RFE+GV++ ++ + L+ L +D+ Y P +I F Sbjct: 359 GLRSEASQRFEKGVNIDTVVLAMNRAAQLVADL---NVADVVPGYVDNYLRKVVPLEIPF 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFE--VSVPSWRQDVEEKADLVEE 462 + L G + +D I +RL F V +GE +K +S P++R D++ + DL EE Sbjct: 416 SVDRINALLGTRLTGDDMDAIFQRLRFPVKWLGEGEKRSGLLSAPAYRPDLQGEHDLAEE 475 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + R+YG D+I + LP + + Q R R + L + EVV +SFI+ Sbjct: 476 VARLYGYDRIPTT-LPKGETTVGQRTWPQTVRER-IADTLVGAGLREVVTFSFINPRHLD 533 Query: 523 LFGGGQREL-----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 G +L + NP+S + +R ++LPGLL+ RN R IAD AIFE+ + Sbjct: 534 RLGLPAEDLLRQVVSVQNPLSEEQGILRPTILPGLLEVAARNASRRIADLAIFEIGSTFS 593 Query: 578 ------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + + + + G I WS K + VD + K A ++ Sbjct: 594 PRALPLKELPD-EPWKVSALVMGEEPIH-----WSGKP----KAVDFYYLKGIAEKLLAT 643 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDFFGLSNPICGFE 688 D + HPGRS + E I LG GE HP++ + + L E Sbjct: 644 LKIDDVAWQREKEVPYLHPGRSARLTVEREGVKIQLGVLGEVHPDVREAYDLVGRPVVME 703 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDV 747 + L ++ + + + + S RD+A ++ IPA + +I +++ Sbjct: 704 LDLSALTLLARAKGDYTPLPRYPS---TDRDMAMVLPLDIPASQVEAVIAETGGEILERW 760 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+QG + +G +S+A + Q T DD++ + I +V++ A R Sbjct: 761 RLFDVYQGNQIAQGYRSLAYTLRYQAPDRTLTDDEVNSRHESIKAALVERLGARFR 816 >gi|157693281|ref|YP_001487743.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus pumilus SAFR-032] gi|157682039|gb|ABV63183.1| phenylalanine--tRNA ligase beta subunit [Bacillus pumilus SAFR-032] Length = 804 Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 243/824 (29%), Positives = 415/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + +++ + +T G+EVE V+ + E + + V+ E++P+ Sbjct: 1 MFVSYKWLEDYVDLEGIQPDELAEKITRSGIEVEAVEYKGEGIKGVVVGHVVEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G+ + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGEDEPVQIICGAPNVDKGQYVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P D G L+L D ++++ LTPNR+D Sbjct: 117 HGMICSLQELGVESKLVPKEYAEGIFVFPNDVNPGEDALQALQLDDAVLELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + + G+A + VAA LGK +K + + SSE I ++D +A +K V+ Sbjct: 177 LNMLGVAYE-VAAILGKEIKLPDTAHDTSSEKAADYISVKIEDQEANPLYAAKIIKNVKI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 AP W++ RL G+R I+ +VDITN+V L+ G P H FD R S + VR+A E Sbjct: 236 GPAPLWIQTRLMNAGIRPINNVVDITNFVLLEYGQPLHAFDYDRFGSKQVVVRKATDSES 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD QE LS ++VI + + ++AG++GG + D TT +L+E A ++ + ++ Sbjct: 296 IQTLDEQERTLSSKHLVITNGTKAHAVAGVMGGLESEVRDETTTILLEAAYFNGQTVRQA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++LG+ ++S RFE+G+D Q + LI GG + N ++ Sbjct: 356 SRDLGLRSESSARFEKGLDPQRTKSAAERAAQLISIYAGGEVLSGTVEENHLETNMNVIH 415 Query: 407 MNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +++E V ++ G+ + ED ++I +LGF+V D V+VPS R D+ + DL+EE+ R Sbjct: 416 VSTERVNKVLGMSISKEDMIQIFNKLGFTVGESNDVLVVTVPSRRMDITIEEDLIEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG D I S LP T L+ Q + R V+R L + + + +S ++ +S F Sbjct: 476 LYGYDNIPS-TLPAT-AGTVGGLTPYQVKRRKVRRFLEGAGLSQSITYSLTNQHKSTAFA 533 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + + P+S + S +R SLLP LL + N+ R F +E V+ E Sbjct: 534 LNSAYKTRLSLPMSEERSVLRQSLLPNLLDSVAYNLARQADSFGFYETGSVFLAEAEGAK 593 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P ++++A + +G+ LW + + VD + AK A + E + + Sbjct: 594 PVEKEHVAGAL----TGL-WHKNLWQGEK----KAVDFYVAKGIAEGLFEKLGVSGQITY 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ + + + V+G+ HP + L FE L + S+ K Sbjct: 645 VQAEREGLHPGRTADVHLNGK-VIGFVAALHPVVEKELDLKETYV-FEFDLTDVMTSESK 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 K + + V RD+A +VDQHI +G L +I L+ D++VFDV++G+ + Sbjct: 703 DMKYTAIPRFPA---VTRDIALVVDQHISSGQLEQVIFEAGGNLLTDLSVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ + ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYLNPEQTLTEEEVNAVHTKVLKALEDTYQAVLR 803 >gi|94988273|ref|YP_596374.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS9429] gi|94992147|ref|YP_600246.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS2096] gi|94541781|gb|ABF31830.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS9429] gi|94545655|gb|ABF35702.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS2096] Length = 806 Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 247/831 (29%), Positives = 425/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPVALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I L I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIELSIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYLGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVAEKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 594 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|291300543|ref|YP_003511821.1| phenylalanyl-tRNA synthetase subunit beta [Stackebrandtia nassauensis DSM 44728] gi|290569763|gb|ADD42728.1| phenylalanyl-tRNA synthetase, beta subunit [Stackebrandtia nassauensis DSM 44728] Length = 827 Score = 345 bits (884), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 262/849 (30%), Positives = 423/849 (49%), Gaps = 66/849 (7%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDN-REALS-PFTIVKVLSVERNP 56 M+ LSWL+++ L D+ + + GLEV+ V++ R+ ++ P + V S E Sbjct: 1 MRVPLSWLREYVALPQDLPIADLDAAFVQCGLEVDTVEDLRDNVTGPLVVGTVASFEVLT 60 Query: 57 DLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D I ++D G+ + ++CGA N G V A PG+ +P ++ RK G S Sbjct: 61 DFKKPIRYCQVDVGEPEPRGIICGASNFAEGDRVVVALPGAVLP-GGFAISARKTYGHVS 119 Query: 115 TGMMCSEKELMLSDDSASIMELP--IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM+ S +EL L +D + IM LP +AP G + L + I ++ LTP+ S C +R Sbjct: 120 DGMIASARELGLGEDHSGIMVLPDSAEAPNGADARPVIGLDEVIFELELTPDMSHCFSMR 179 Query: 173 GIALDLVAA-GLGKLKEINISC-PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 GIA ++ G+G ++ P ++ P ++ +DD C FA V+G+ A Sbjct: 180 GIAREVAHRLGVGFTDPAGLTTEPAATADGPHPLR--VDDPLGCDRFATRAVRGLDPAAA 237 Query: 231 -PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P W+R+RL G+R IS VD+TNY+ L+ G P H +D + + L VRRA +GEK+ Sbjct: 238 SPEWLRRRLIHAGMRPISLAVDVTNYLMLELGQPMHAWDLATLKGTLVVRRAAAGEKLTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L +++VI D S+AGI+GG+ + D+TTDVL+E A WDP +AR+G+ Sbjct: 298 LDDVERSLDAEDLVICDDTGPLSLAGIMGGETSEISDSTTDVLMEAAHWDPTTMARTGRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +++ RFERGVD ++ + L++ GGT D + +P + + + Sbjct: 358 HRLSSEAGKRFERGVDPALCRVAVQRAIDLLVEYGGGTV-DASVGDIDNRRPTATIRLAA 416 Query: 410 EV-KRLSGIDVPIEDSLRI---LERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ R++G+ D+ R+ L+ G + E D V+ PSWR D+ ++AD+VEE++R Sbjct: 417 DLPSRIAGVSY---DTTRVGAALDACGCTWTAEADTLTVTPPSWRPDMTDQADVVEEVIR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + G D++ S L R L+ Q R R++ R LAS +E + + F + +V Sbjct: 474 LDGYDKVPSV---LPAAPPGRGLTPTQRRRRHIGRALASAGYVETLTYPF--GDPTVFDA 528 Query: 526 GG-------QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G ++ L + NPI +RT+L+PGLLKA NVDR I D +FE V+ N Sbjct: 529 LGLPADDPRRQVLTLANPIVDAEPALRTTLIPGLLKALKVNVDRGIRDVGLFETGLVF-N 587 Query: 579 DTP--EGQKYMAAGIRKGSSGIEGS------------------GRLWSDKSEERCRFVDL 618 P E Q + + + E + G + SD R D Sbjct: 588 PRPGWEDQPLPQLPVDRRPTAAELAVADALRPHQPQHLATVRCGHIESDGWWGPGRLGDW 647 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 DA A A ++ +R AP +HPGR + + + V+G+ GE HP++ D Sbjct: 648 SDAIAAARTIASASGVELEVRQAQHAP--WHPGRCAELLHN-DTVVGHAGELHPSVCDAL 704 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR-DLAFIVDQHIPAGTLVNII 737 + C E+ LD+I + + H +PV D+A +VD PA + + + Sbjct: 705 EVPRRTCAVEINLDAIGFPEVP--PGPSISH----YPVALIDVAVVVDATTPAAQVASAL 758 Query: 738 -KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 + L++D+ +FDVF G+ LGE +KS+A ++ + T D+ DR V Sbjct: 759 SEGAGDLLEDIRLFDVFSGEQLGENRKSLAYKLTFRAPDRTLTADETVEARDRAVALAAD 818 Query: 797 KTNAVLRSS 805 + AVLR + Sbjct: 819 RHGAVLRGA 827 >gi|19745853|ref|NP_606989.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS8232] gi|30316243|sp|Q8P1K0|SYFB_STRP8 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|19748002|gb|AAL97488.1| phenylalanyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes MGAS8232] Length = 801 Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 243/831 (29%), Positives = 425/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIASDK-----VLTYASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFAEITKFPAMTRDIALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I +++ ++ A +R Sbjct: 751 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLTEQVGAEVR 801 >gi|269956122|ref|YP_003325911.1| phenylalanyl-tRNA synthetase subunit beta [Xylanimonas cellulosilytica DSM 15894] gi|269304803|gb|ACZ30353.1| phenylalanyl-tRNA synthetase, beta subunit [Xylanimonas cellulosilytica DSM 15894] Length = 864 Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 257/859 (29%), Positives = 406/859 (47%), Gaps = 102/859 (11%) Query: 7 WLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILR 64 WL DH L TD++ E++ L +GLE E V + P + +VL+ P + + Sbjct: 8 WLADHVELPTDLTAEQLAAALVKVGLEEEAVHAAKVTGPLVVGRVLAQTPEPQKNGKTIN 67 Query: 65 ---IDTG-KHQEIQV----------------VCGAPNVRVGLLGVWAPPGSCIPENNMIV 104 +D G +H Q+ +CGA N VG L V A PG+ +P + Sbjct: 68 WCLVDVGPEHNATQIKGVDPADIPAGGARGIICGAHNFGVGDLVVVALPGTVLP-GPFPI 126 Query: 105 NVRKIRGIESTGMMCSEKELMLSDDSASIMELPID-----APVGGRLSDYLELSDPIIDV 159 RK G S GM+CS EL L D I+ +P D A G L L D ++++ Sbjct: 127 AARKTYGHVSDGMICSTAELGLGDGGHGIIVVPRDLGIEDAVPGQDAIALLGLGDEVLEI 186 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 ++TP+R RG+A + + + + L + + ++DD++ G Sbjct: 187 NVTPDRGYAFSYRGVAREFSHSTGAAFTDRALVSDLPAATAD-GFAVEVDDAAPIHGVVG 245 Query: 220 C---CVKGVRN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C + VR+ P+WM++RL+A G+RSIS VD+TNYV LD G P H +D ++ Sbjct: 246 CDRFVTRIVRDLDPTAPTPSWMKRRLEASGMRSISLAVDVTNYVMLDLGQPLHAYDLDKV 305 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDGR---IQSIAGIIGGKHAGCDDN 327 + + VRRA GE++ LD+ + L ++++I + DGR + +AG++GG + + Sbjct: 306 AAPVVVRRATPGERLTTLDDVDRALDSEDLLITDSPDGRASRVLGLAGVMGGASSEVSEA 365 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TT VLVE A +DPI +AR+ + + +++ RFERGVD + + +V L++ GGT Sbjct: 366 TTAVLVEAAHFDPITVARTARRHRLPSEAAKRFERGVDPRLPAVAAQRVVDLLVEHGGGT 425 Query: 388 ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVS 445 A + T P I F R++G++ P E + ILE++G +V D+ V+ Sbjct: 426 ADPAVGDLDATTAPAPITFPVGLATRVAGVEYPREQVVGILEQIGCTVAPGPTADEVVVT 485 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ E+ LVEEI+RI G DQI S + R L+ Q R V R LA Sbjct: 486 PPTWRPDLTERVALVEEIVRIAGYDQIPSV---VPAAPGGRGLTAGQRVRRSVARALAEA 542 Query: 506 AMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 ++E +++ FI + G + + + NP++ D MRTSLL L++ RNV Sbjct: 543 GLVETLSYPFIGDAELDALGLPADDARRTAVRLANPLADDRPLMRTSLLATLVETARRNV 602 Query: 561 DRAIADFAIFEVSHVY--------------------------ENDTPEGQKYMAAGI--R 592 R + D A+FEV V P +++AA + R Sbjct: 603 ARGLPDVAVFEVGLVTLPTAASPAAPQLPVGVRPSADELEALAAAVPAQPRHVAAVLTGR 662 Query: 593 KGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 +G G+GR W+D E L +A +EP + +HP Sbjct: 663 SDLAGWWGTGRTADWADALE----LARLVAERAGVAVAVEPATDVMP----------WHP 708 Query: 651 GRSGIIKTSA----EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 GR + E ++GY GE HP +++ GL FE LD + + Sbjct: 709 GRCAALVVDGGDADERIIGYAGELHPKVVERTGLPKRSVAFE--LDLTALEDAASGEPVA 766 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S+ K D AF+VD +PA T+ ++ L++DV++FDVF G+ LGEG+KS+ Sbjct: 767 ATPVSAFPAAKEDFAFVVDDAVPAETVRAAVVTGAGDLLEDVSLFDVFTGEQLGEGRKSL 826 Query: 766 AIQVLIQPLKDTFRDDDIR 784 A V ++ T D++R Sbjct: 827 AYSVRLRAADRTLTADEVR 845 >gi|217077015|ref|YP_002334731.1| phenylalanyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] gi|217036868|gb|ACJ75390.1| phenylalanyl-tRNA synthetase, beta subunit [Thermosipho africanus TCF52B] Length = 782 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 253/825 (30%), Positives = 425/825 (51%), Gaps = 69/825 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF------TIVKVLSVER 54 M+ +++WLKD ++ + S E+I + L+ G VE E ++PF + KV+ VE+ Sbjct: 1 MRLSINWLKDFVNIEKSAEEIAEKLSLTGTNVE-----EIINPFDVEGKIVVGKVIDVEK 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D I+ ++D G Q ++ G +V G A G+ + + ++ RK+RGI Sbjct: 56 HPDADKLIVCKVDVG-DQIKTILTGDLSVSKGDTVPVALEGARLFDLKIVP--RKMRGIL 112 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GMMCS +EL L + S+ + + + G + +Y L D ++D+ +TPNR DC+ V G Sbjct: 113 SEGMMCSLQELGLEEKSSGVYKFKEEVQPGTDVIEYFGLKDKVLDIEITPNRPDCLSVIG 172 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A L + I E P+EIK + D C + ++ V +P W Sbjct: 173 IAREVSAIYDVDLN-LKIKNIEGKEKFPVEIKIESDG---CYRYTARVIRNVTVKESPMW 228 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +++RL A GLR I+ +VDITNYV L+ G+P H FD + ++ V+ A GE++L LD Sbjct: 229 LKKRLIAAGLRPINNIVDITNYVMLETGHPVHAFDLKNVPKIV-VKDAKGGEEVLLLDEN 287 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +Y L V+I +I ++ G++GG+ +G D+T D+L+EVA++DP+ I ++ K GII Sbjct: 288 KYKLLGGEVLITDGEKILALGGVMGGEESGVKDDTKDILLEVAMFDPVRIRKTSKAHGII 347 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-----IVFMN 408 TDS YRFERGVD I V+ + LIL L GGT +DI + PRK I F Sbjct: 348 TDSSYRFERGVDPNDAIYVINRLTELILELSGGTPTDI-----LDLYPRKIDRTEIDFDF 402 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIY 467 + ++ G ++ + +IL RLGF V G +V VP++R DV DLVEEI RIY Sbjct: 403 NFTNKVVGENIEEDVQKKILGRLGFEVEGN----KVFVPTYRYFDVTRPIDLVEEISRIY 458 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G+++I+SEP + + R+ + + RY +K L + +E +N SF+S + + Sbjct: 459 GMEKIESEPFRILINSNSRS---KNQKLRYKLKDALKAEGFLEAMNLSFVSNDIVGKWNF 515 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQ 584 + I NPI+ +M+ MR SLL GLL + N R D +FEV V+ EN P+ Sbjct: 516 TGFSVRISNPINEEMAVMRPSLLYGLLDSLSYNYKRQNRDVKLFEVGKVFIEENGQPKDV 575 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + +A +GR+ + + R +D + K ++ E F FE Sbjct: 576 EKLA---------FVATGRI-NKRDYTDQRMIDFYTFKGYIENLAEEFNL--KFEFEPAE 623 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD-FFGLSNPICGFEV-----YLDSIPISQ 698 + P R I + + + G G ++D F+ + + + E+ Y + + + + Sbjct: 624 VEGFVPTRCARILLNGQEI-GVMGMLDDEMMDKFYDVKDEVYALEISTQPLYENYVEVPE 682 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSL 758 + + S V+RD++ +V G ++ + + +++ + DV+ GK + Sbjct: 683 YRES--------SQFPSVRRDVSLLVPNDFLMGKVIEGLYKY-KYVEEAGISDVYTGKGI 733 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KSV + + + T +D++ + ++I ++++ K LR Sbjct: 734 EEGYKSVTVYCVFRAEDKTLSEDEVNKIWEKIKKDLIYKYPLKLR 778 >gi|314933337|ref|ZP_07840702.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus caprae C87] gi|313653487|gb|EFS17244.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus caprae C87] Length = 800 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 244/821 (29%), Positives = 424/821 (51%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ + ++ + + +T G+EV+ + D + + + V+S +PD D Sbjct: 1 MLISNEWLKDYVNINQPVQDLAERITRTGIEVDDIIDYTKDIKNLVVGHVVSKAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEDEPVQIVCGAPNVEEGQHVIVAKVGGRLP-GGVKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I P + G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNVTPKAFESGIYVFPTEVIPGTDALEALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + S S +S E+ + + ++ V V +P Sbjct: 180 GTAYEVAALYQTEMTKPQTSSQESDKSASDELSVTVQNEDKVPYYSARIVHDVTIAPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL +R I+ +VDI+NYV L+ G P H+FD ++I S + VR+A EK+ LD Sbjct: 240 WMQARLMKADIRPINNVVDISNYVLLEYGQPLHMFDQNQIGSQKIEVRQANQNEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++ G++GG + D T +V++E A++DP++I + + L Sbjct: 300 DCERELLDSDIVITNGNEPIALGGVMGGDFSEVTDQTRNVIIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D A ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYASGTVLKDRVAAGDLGAMVTPINITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ E+ + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNQTIGFNLSDEEIINIFEQLGFETQNQNGQLIVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I S LP+ + +L+ +Q +TR VK L + + + +S +SK+ + F R Sbjct: 480 EIPS-TLPVFEDVTSGSLTDRQYKTRTVKETLEGAGLDQAITYSLVSKDHAKDFALQDRS 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L++A NV R +D ++E+ V+ E P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIEAVAYNVARKNSDVKLYEIGRVFFGNGEGQLPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + AK V E +L+F+ +G Sbjct: 599 YL-SGILTG----QYVNHAWQSKKES----VDFYLAKGVVDRVAEKL----NLKFDYRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ I+ + E + G+ GE HP + L FE+ D+I K Sbjct: 646 QITGLHPGRTAIVSLNGEDI-GFIGELHPTLAAENDLKRTYV-FELNYDAI---MKVSVG 700 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 + V RD+A VD +PA L++II N + ++DD VFDV++G+ L EGK Sbjct: 701 YINYEPIPRFPGVTRDIALEVDHEVPASNLISIIHNNGEDILDDTLVFDVYEGEHLEEGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVAI++ ++T D+ + + D+I+E +++ A +R Sbjct: 761 KSVAIRLNYLDTENTLTDERVSAVHDKILE-ALQQQGATIR 800 >gi|212715741|ref|ZP_03323869.1| hypothetical protein BIFCAT_00641 [Bifidobacterium catenulatum DSM 16992] gi|212661108|gb|EEB21683.1| hypothetical protein BIFCAT_00641 [Bifidobacterium catenulatum DSM 16992] Length = 867 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 265/884 (29%), Positives = 420/884 (47%), Gaps = 104/884 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY------------LELSDPII 157 G S GM SE+EL L D+ I+ L G +Y L L +P++ Sbjct: 123 YGHISNGMCASERELGLGDNHDGIILL---RKYGFTPEEYEKLQPGDDAMHLLHLDEPLL 179 Query: 158 DVSLTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSS---ESIPLEIKFDLDD 210 ++++TP+R RG++ + AA +N P++ E +I+ +DD Sbjct: 180 EINITPDRGYAFSYRGVSREYHHSTGAAYTDPAVALNEKAPITKGLPEGTKTDIEVIVDD 239 Query: 211 SSLCKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 ++ G C VKG + PNWMR+RL G+RSIS VD+TNYV LD G P Sbjct: 240 NNPIHGVVGCDRYYARAVKGFDPASHTPNWMRRRLARAGMRSISLAVDVTNYVMLDLGQP 299 Query: 264 SHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI------ASDGRIQSIAGII 317 H +D +I + VRRA GEK+ LD +++DLS ++++I A R+ IAG++ Sbjct: 300 MHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGARGSRVLGIAGVM 359 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 GG + T ++L+E A +D ++IARS + I +++ RFERGVD Q + Sbjct: 360 GGMYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMAA 419 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 L++ G S+ N R I+F SEV R++G+D + IL +G SV G Sbjct: 420 ELMIKYGNGEPSEHPTDFNTVSNRRPILFKASEVARVAGLDTDVNTISDILTDIGCSVAG 479 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 + +F V PSWR D+ E DLVEE+ R+ G D+I +P VE K L+ +Q R R Sbjct: 480 GGNGEFSVVPPSWRPDLNEPCDLVEEVARLVGYDEIPVI-VPPAPVEGKVGLTAEQLRKR 538 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPG 551 V LA M+E +++ F+ E F E +EI NP++ D +R ++P Sbjct: 539 QVADELAEYGMVETLSYPFVGDEDYKNFALDAAETKNVSVEIANPLAGDRPFLRRDIIPT 598 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYEND-------------TPEGQKYMA---------- 588 L + RN+ R + + +++E+ HVY D P ++ A Sbjct: 599 LAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPDQPM 658 Query: 589 --AGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 AGI G+ SG G R WSD E R D A AL++ +P Sbjct: 659 HVAGILTGNAVDSGWLGERRAVDWSDAVEAVQRISDRIGA---ALTLNQPNA-------- 707 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 P+ +HPGR+ + + ++ +G GE HP+I + G FE+ L ++ + + Sbjct: 708 EDVPAQWHPGRAARV-MAGDVFVGMVGELHPHINEALGFPAHSAAFELDLTALFATLSGK 766 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGE 760 K + S+ PVK+DLAF V + A L I++ ++ + +FDV+ G LGE Sbjct: 767 PVQAKPI--STFPPVKQDLAFTVSTDVTAAELKQVIVEAAGDSLESIELFDVYTGDQLGE 824 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KS+A V + T +D + RIV+ K A LR+ Sbjct: 825 DEKSLAYAVTFRAPDKTLASEDSEAIRKRIVDE-ASKLGAQLRA 867 >gi|72162459|ref|YP_290116.1| phenylalanyl-tRNA synthetase subunit beta [Thermobifida fusca YX] gi|91208144|sp|Q47N76|SYFB_THEFY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71916191|gb|AAZ56093.1| phenylalanyl-tRNA synthetase beta subunit [Thermobifida fusca YX] Length = 831 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 258/858 (30%), Positives = 414/858 (48%), Gaps = 81/858 (9%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ +SWL+++ L + + ++ D L S+GLEVE V+ A P + +VL++E Sbjct: 1 MRVPVSWLREYVALPAEATARELADKLISLGLEVETVEEVGADISGPIVVGRVLTIEELT 60 Query: 54 --RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + D E Q ++CGA N G L V + PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVDVGDANGTGEPQGIICGARNFAEGDLVVVSLPGAVLP-GGFAISARKTY 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 G S GM+CS EL L +D I+ LP A G + D L L + ++D+++TP+R + Sbjct: 120 GRMSEGMICSASELGLWEDHEGIIVLPEGFAEPGTKADDLLGLRESVLDIAVTPDRGYAL 179 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVR 226 +RGIA ++ AA + + + PL S + P + D ++C + + V G Sbjct: 180 SLRGIAREVAAAYGVEFTDPAVR-PLPSAAEGGYPASVA----DPAICSRYVLRGVTGF- 233 Query: 227 NNVAPN--WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 + AP WMR+RL G+RSIS VDITNYV L+ G P H +D S + + VR A G Sbjct: 234 DPAAPTPLWMRRRLHLCGVRSISLAVDITNYVMLELGQPLHAWDRSTLRGPIEVRLARPG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EK+ LD+ L PD+++I + +IAG++GG + +TD+L+E A +D +IA Sbjct: 294 EKLETLDHVVRALDPDDILITDESGPINIAGVMGGLSTEIRETSTDILIEAAHFDAAHIA 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 R+ + + ++S RFERGVD + V L+ L G T D + T I Sbjct: 354 RTSRRHQLSSESSRRFERGVDTDIQLAAATRAVELLAELGGATIEDGITHIDHTVPREPI 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 V R++G+D P+E + L ++G V+ E D +V+ PSWR D+ + DL EE++ Sbjct: 414 VVRAGHAGRVAGVDYPVETEIARLRQVGCEVVQEGDTLKVTPPSWRPDLTDPNDLAEEVI 473 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R G + I P L Q R L+ Q R V R LA R EV+N+ F+ Sbjct: 474 RNEGYENI---PALLPQAPPGRGLTRGQRLRRAVGRTLADRGFFEVLNYPFVGVRDFDRL 530 Query: 525 -----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 + + + NP++ D +RT+LLPGL KA RNV R D A+FE+ VY Sbjct: 531 RLDEDDARRTAVRLANPLNDDEPLLRTTLLPGLFKALVRNVGRGFTDIALFEMGLVYHPK 590 Query: 577 ------------------------ENDTPEGQKYMAAGI--RKGSSGIEGSGRLWSDKSE 610 E PE +++ A + ++ SG G G Sbjct: 591 PDAPAKAPILPVDRAPTAEERATLEAALPEQPRHIGAVLAGQRLRSGWWGGG-------- 642 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS---AEIVLGYF 667 E + D +A SV + + + ++ AP +HPGR + + E+++G+ Sbjct: 643 EPATWADAIHTAKEAASVAGVELIVRAAQY---AP--WHPGRCAALYVADGDREVLVGHA 697 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ++ +GL + E+ D I + +S+ +D+A +VD Sbjct: 698 GELHPRVIKAYGLPSRTSALEIDWDRI----EAAAAAATAPQISTYPVATQDVALVVDAS 753 Query: 728 IPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 +PA + ++ L++ V +FDV+ G +GEG+KS+A + ++ T ++ + Sbjct: 754 VPAAEVEAALREGAGELLESVRLFDVYTGDQVGEGRKSLAYALRLRAHDRTLTVEETNRI 813 Query: 787 MDRIVENVVKKTNAVLRS 804 D V ++T AVLR Sbjct: 814 KDAAVAAAAERTGAVLRG 831 >gi|94994069|ref|YP_602167.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10750] gi|94547577|gb|ABF37623.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10750] Length = 806 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 247/831 (29%), Positives = 427/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II +S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIGLSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPPKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++EVA++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEVAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-- 580 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E + Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMISGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 581 ----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 P + A I G + + + + VD + AK L + ++L Sbjct: 594 KENLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + + V ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALSSDQTFVEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGVTIQAGKKSMAYSLNFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|326317192|ref|YP_004234864.1| phenylalanyl-tRNA synthetase subunit beta [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374028|gb|ADX46297.1| phenylalanyl-tRNA synthetase, beta subunit [Acidovorax avenae subsp. avenae ATCC 19860] Length = 812 Score = 344 bits (882), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 254/843 (30%), Positives = 408/843 (48%), Gaps = 71/843 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE---RNPD 57 M+F SWL++ + +S ++ +TLT GLEVE D PF V V ++ ++P+ Sbjct: 1 MQFPESWLREFCNPPLSTAELAETLTMAGLEVE--DLSPVAPPFHGVVVGEIKEAVQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G+ + +VCGA N RVG+ +G PPG + V K+R Sbjct: 59 ADRLRVCQVDVGQPTLLNIVCGASNARVGIKVPCATVGAELPPGE--DGKPFAIKVGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D ++ELP DAPVG + YL L D + + LTPN + + Sbjct: 117 GVESQGMLCSARELKLSEDHEGLLELPADAPVGQDIRQYLTLDDTLFTLKLTPNLAHALS 176 Query: 171 VRGIALDLVAAGLGKLKE-INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V GIA ++ A L+E + + P+ S + L +K D LC F+ V+ + Sbjct: 177 VYGIAREVSALTGAPLREPVFAAAPVGSADV-LPVKISAPD--LCGRFSGRVVRHINAKA 233 Query: 230 A-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 + P WM RL G RS+S LVDI+NYV + G PSH+FD +I L VR GE + Sbjct: 234 STPRWMLDRLARCGQRSVSPLVDISNYVMFELGRPSHIFDLEKIHGGLDVRWGREGESLK 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ D+ VI+ + +++S+AGI+GG D+T + +E A W P +A + Sbjct: 294 LLNGATVDVDGQVGVISDERQVESLAGIMGGDATAVSDDTRHIYIEAAFWWPKAVAGRSR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-----IARNITYKPRK 403 TD+ +RFERGVD + + ++ I L+L +C GT +C A N+ + R Sbjct: 354 RFNFSTDAGHRFERGVDPRLTVEHIERITQLVLEIC-GTPETVCGPIDDQAPNLP-QARP 411 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++ G+ + + L +LG + V+ PS+R D+ + DL+EE+ Sbjct: 412 VTLRVERAAKVIGMPLTLAQCADALRKLGLHPQEGEGRLTVTPPSYRFDIAIEEDLIEEV 471 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSV 522 +RI G Q+ P PL + K L + R+ + V+R LA+ E +N+SF+ ++ Sbjct: 472 VRIVGYGQLPETP-PLAPITPK--LRREDRRSAFAVRRELAALGYQETINFSFVEEQWER 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--- 579 G + +LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 529 DLAGNAEPIRLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVRVFELGRVFLRDAGV 588 Query: 580 -----TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 T EG Q AG G+ G WS K + VD FD K D +++ P Sbjct: 589 ASSDTTVEGFHQPMRVAGAAYGA----GDVLQWSRKDDA----VDFFDVKGDVEALLAPR 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ FE HPGR + + G+ GE HP + + FE+ LD Sbjct: 641 KAV----FEPAEHPALHPGRCARVLLEGRSI-GFIGELHPKWRQQWDFAQAPVLFELELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN---VDRLIDDVTV 749 ++ R + V+RD+A +V + ++ ++ + RL V + Sbjct: 696 AVLARDVPR-----FAAVGKQQAVERDIAIVVSEQTTHADVMRVVGSALPATRLRSAV-L 749 Query: 750 FDVFQGK---------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 FDVF+ K G+KS A+++ + D +I + +++ + ++ A Sbjct: 750 FDVFRPKRGKDGEPVAGFAPGEKSFAVRLALGDGVTALTDAEIDESLQAVLQKLEQQLGA 809 Query: 801 VLR 803 LR Sbjct: 810 RLR 812 >gi|320011791|gb|ADW06641.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces flavogriseus ATCC 33331] Length = 836 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 268/872 (30%), Positives = 427/872 (48%), Gaps = 103/872 (11%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE-- 53 M+ LSWL++++D T+ + + L S+GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPKTETGRD-VQAKLVSVGLEVETVEQTGAGLKGPLVVGEVLTIEEL 59 Query: 54 ---RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + P C + TG+ QEI VCGA N VG V PG+ +P + + R Sbjct: 60 EGFKKPIRFCTVDVGTANGTGEPQEI--VCGARNFAVGDKVVVVLPGAVLP-GDFAIAAR 116 Query: 108 KIRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 K G S GM+CS EL + DD + I+ LP + G + LEL D ++D+++TP+R Sbjct: 117 KTYGKTSHGMICSTDELGMGDDGTHGIIVLPPEYEPGTDAIELLELVDEVLDIAVTPDRG 176 Query: 167 DCIGVRGIALDL-VAAGLGKLKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ + P ++ P+++ D C F V Sbjct: 177 YCLSMRGVARETAIAYGL-PLRDPALLDVPPPNAHGYPVKVS----DPIGCGNFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G++ +P WM++RL+ G+R++S VDITNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLQPEARSPIWMQRRLQKAGMRTVSLAVDITNYVMLELGQPLHAYDRTRVQGPIGVRRAQ 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD-----NTTDVLVEVAL 337 GEK+ LD + L ++VI D +AG++GG D TT+V++E A Sbjct: 292 QGEKLTTLDGAKRVLDAQDLVITDDRGPIGLAGVMGGADTEIADAAEGTGTTEVVIEAAH 351 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 +D I +AR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 FDAIAVARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEITA 411 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 PR I + R++G+ E +R L+++G V G+ D+ V+VPSWR D+ E Sbjct: 412 PSAPRTIAMPANHPDRVAGVAYGRETVVRRLQQVGCDVYGQ-DELIVTVPSWRPDLAEPN 470 Query: 458 DLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL EE++R+ G + + S P P + R L+ +Q R V R LA +E +++ FI Sbjct: 471 DLAEEVIRLEGYENLPSTLPTPPS----GRGLTDRQRLHRRVGRALAGSGYVEALSYPFI 526 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 G +R + ++NP+S + +RT+LLPGLL A RN R D A+FE Sbjct: 527 GDAVLDQLGLEKDDARRRTVTLVNPLSDEEPALRTTLLPGLLGALRRNDGRGSHDLALFE 586 Query: 572 VSHVYENDTPEGQKYMA--------------------------------AGIRKGSSGIE 599 V+ P GQ+ A AG R+ +G Sbjct: 587 TGLVFR---PTGQETEAVRLPVDRRPTDEEIAGLDAALPRQPRRAAVVLAGARE-QAGWW 642 Query: 600 GSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 G GR W+D S E R + A+ + V ++R + AP +HPGR + Sbjct: 643 GKGRPANWAD-SVEAARVI----AREAGVEV--------TVRADRHAP--WHPGRCAALY 687 Query: 658 TS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + E + G+ GE HP ++ L C EV LD + ++ + +S+ Sbjct: 688 VTVDGVETLFGHAGELHPRVVKELHLPERTCAMEVELD---VLEQAVDGALQAPRISTFP 744 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 +D+A +VD +P+ + N ++ L++ + +FDVF G+ LGEGKKS+A + + Sbjct: 745 VATQDVALVVDSGVPSDAVENALREGAGDLLESLRLFDVFTGEQLGEGKKSLAYALRFRA 804 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V ++T AVLR + Sbjct: 805 PDRTLTVEEASAARDTAVALAAERTGAVLRGA 836 >gi|297155948|gb|ADI05660.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces bingchenggensis BCW-1] Length = 841 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 264/869 (30%), Positives = 416/869 (47%), Gaps = 92/869 (10%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPAGETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGRVLAIETLE 60 Query: 54 --RNPDLDCAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + + G + ++CGA N VG V + PG+ +P ++ RK Sbjct: 61 GFKKPIRYCQVDVGQANGTGEPQNIICGATNFAVGDKVVVSLPGAVLP-GGFAISSRKTY 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G S GM+CS EL +SDD I+ LP + VG + LEL D ++D+++TP+R C+ Sbjct: 120 GKVSEGMICSAAELDMSDDHKGIIVLPPEYEVGTDAIELLELVDEVLDIAVTPDRGYCLS 179 Query: 171 VRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +RGIA + A L++ +++ P ++ P+++ D C F V G+ Sbjct: 180 LRGIAREAATAYGLPLRDPALLDVPAP-NAHGYPVQVA----DRIGCDRFTARTVTGLDP 234 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P W+R+RL+ G+R +S VDITNYV L+ G P H +D SR+S + VRRA GEK Sbjct: 235 EAHSPIWLRRRLQKAGMRPVSLAVDITNYVMLELGQPLHAYDRSRVSGAIGVRRAEPGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKH-----------AGCDDNTTDVLVEV 335 LD + L +++VI D +AG++GG + G TTDV++E Sbjct: 295 FTTLDGTKRVLDAEDLVITDDNGPIGLAGVMGGANTEIADAVTDPETGAVQGTTDVVIEA 354 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A +D ++IAR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 355 AHFDAVSIARTARRHKLSSEASRRFERGVDPEAASAAAQRTVDLLVLLAGGTAEAGVTEI 414 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 PR I R++G+ E +R L+++G V G D V+VPSWR D+ + Sbjct: 415 IAPSAPRTITVPADHPDRVAGLAYGRETVVRRLQQVGCDVYG-ADTLTVTVPSWRPDLRD 473 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S L Q R L+ +Q R V R LA +E +N+ F Sbjct: 474 PNDLAEEVIRLEGYENLPST---LPQPPAGRGLTERQRLHRRVGRALAGAGYVEALNYPF 530 Query: 516 ISKE---QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I +E Q L R + ++NP+S +RT++LPGLL A RN R D A+F Sbjct: 531 IGEEVLDQLGLAADDPRRDVVRLVNPLSDAEPALRTTMLPGLLAALRRNDGRGTHDLALF 590 Query: 571 EVSHVYE--NDTPEG-----------------------QKYMAAGIRKGSSGIEG----- 600 E V+ D P Q AA + G+ G Sbjct: 591 ETGLVFRATGDEPPAVSLPVDHRPSDEEIAALNAALPSQPRRAAVVLAGAREQAGWWGKD 650 Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT-- 658 + W+D E R V A+A ++I +R + P +HPGR + Sbjct: 651 TPVSWADAVEA-GRIV----ARAAGATLI--------VRQDQQDP--WHPGRCAALLAVV 695 Query: 659 -SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 EI++G GE HP + GL C E+ LD + ++ + H+S+ Sbjct: 696 DGQEILVGNAGELHPRVTKALGLPERTCAMEIDLDRL---ERAAEGPVQAPHVSTFPVAT 752 Query: 718 RDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 +D+A +VD + A + ++ L++ + +FDVF G+ LGEGKKS+A + + Sbjct: 753 QDVALVVDASVAAADVEAALRAGAGELLESLRLFDVFTGEQLGEGKKSLAYALRFRAPDR 812 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V V++T AVLR + Sbjct: 813 TLTAEEASAARDAAVAAAVERTGAVLRGA 841 >gi|312863101|ref|ZP_07723339.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] gi|311100637|gb|EFQ58842.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus vestibularis F0396] Length = 816 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 250/831 (30%), Positives = 425/831 (51%), Gaps = 57/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + VL+ E P+ Sbjct: 15 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHVLTCEDVPETH 74 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+ Sbjct: 75 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMI 133 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D+ + I LP DA G + YL+L D II++S+TPNR+D + +R Sbjct: 134 CSLAELGLPDNIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALSMR 193 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNN 228 G+A + VAA GK ++ P ++ +S P K + +S +A V+ V Sbjct: 194 GVAHE-VAAIYGK----SVHFPEKTVTEDSKPASDKISVAIESDKVATYASRVVENVTVQ 248 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D + R A GEK+ Sbjct: 249 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEDSRIVARDAREGEKL 308 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + ++AG++GG D+N+ +V++E A++D ++ ++ Sbjct: 309 VTLDGEERELTTEDIVITVADKPVALAGVMGGASTEIDNNSKNVVLEAAVFDGKSVRKTS 368 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+G++ ++ L +++ L GT + A ++ +P ++ Sbjct: 369 SRLNLRSESSSRFEKGINNDTVLEALDFAAAMLQELANGTVLAGRVQAGSVDTEPVQVST 428 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G + D + +LGF + G+ DKF VSVP R D+ +ADLVEEI RI Sbjct: 429 SLDYVNVRLGTALTFADIEDVFAKLGFGLTGDADKFTVSVPRRRWDISIQADLVEEIARI 488 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q R V+ + + E+++++ + E++V Sbjct: 489 YGY-----EKLPTTLPEAAGTAGELTETQVLRRKVRTIAEGAGLTEIISYALTTPEKAVE 543 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F L E++ P++ D S +R +++ G+L NV+R ++ AI+E+ V+E Sbjct: 544 FAVTPSNLTELMWPMTVDRSALRQNMVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQKG-N 602 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSLD 636 ++ + I + I SG + + + VD F AK D L V +V+ Sbjct: 603 PKEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKGIVEALFDKLEVSVDYVATK 660 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 L + HPGR+ I + + G+ G+ HP +G+ E Y+ I + Sbjct: 661 DL-------ASMHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINL 706 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDV 752 S + + V ++ V RD+A ++ I +++ I V RL+ V +FDV Sbjct: 707 SAVEAALQPDQPFVEITKFPAVSRDIALLLKAEITHQEVLDAIYFAGVKRLV-AVKLFDV 765 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 766 YAGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVKAEVR 816 >gi|167042809|gb|ABZ07527.1| putative B3/4 domain protein [uncultured marine microorganism HF4000_ANIW137I15] Length = 810 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 248/834 (29%), Positives = 413/834 (49%), Gaps = 55/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDNREALSPFTIVKVLSVERNPD 57 M+ SWLK+ +D + + E++ LT G+E VE+V + ++L V+ +P Sbjct: 1 MRVIWSWLKEFVDYEGTPEELAHVLTMNGIETVNVERVGGE--FEAILVGEILDVQPHPG 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + R+ TG E ++VCGAPNV VG PPGS +P+ I VR IRG +S G Sbjct: 59 ADKLNLCRVSTGGG-ERRIVCGAPNVAVGQRVPVIPPGSRLPDGRTIEAVR-IRGEDSEG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL D I L D VG LS+ LSD +++V +TPNR DC+ V GIA Sbjct: 117 MICSAAELGFGDAIDGIWVLDADCEVGAPLSEAAGLSDTVLEVEVTPNRGDCLSVLGIAR 176 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 ++ L + + +D LC + V+ ++ +P WM+ Sbjct: 177 EVACYQRTPLHPSKPRVLEHGGPVKGFVTVSVDCPDLCPRYTARVVQKMKMGPSPIWMQW 236 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE---KILALDNQ 293 RL+ VG+R I+ +VD+TNYV L+RG P H FD +I + V RA + E LD Sbjct: 237 RLQTVGIRPINNVVDVTNYVMLERGQPLHAFDLEKIREGEIVVRAQTAEDESTFTTLDET 296 Query: 294 EYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + P+ + DG +I G+IGG ++ T+ +L+E AL+ P ++ R+ + +G+ Sbjct: 297 QRT-PPEGACMICDGAGPVAIGGVIGGLNSEVGPGTSAILLESALFQPQSVRRTAREMGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKPRKIVFMNSE 410 T++ +RFERGV+ G+ L LI + GG + ++R+ + + ++ + Sbjct: 356 ATEASFRFERGVNPVGVPQALDRAAELIRRVTGGEVARGMADVSRSALLEKKMVILRTGQ 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +KR+ G+D+PI + IL LG V +K + +P+ R D+ + D++EE+ RIYG Sbjct: 416 LKRVLGMDIPIREVSDILLALGMEVTAAESKEKMSIRIPAHRLDLSREIDIIEEVARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-- 525 D+ P L + R L+ + V+ VL ++E +N SF+ + + Sbjct: 476 YDRF---PTILPSGGNARLGLASEWDFLNRVRTVLCGAGLLEAINLSFVPALKGIGTADS 532 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-----ND 579 G L +LNP+S + + +R+ L P LL+ T N + ++ + +FEV HV+ +D Sbjct: 533 NDGGPSLALLNPLSREGAMLRSCLWPALLRNTAANRNHSVGEIRLFEVGHVFRPGPSPSD 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 + + AG+ +S +W++ + +R D +D K ++ F ++ R Sbjct: 593 SLPDESLQIAGVLSQAS----ERSVWTESARKR----DFYDIKGILEHLLSAF-GVEHAR 643 Query: 640 FESGAPSWYHPGRSGII-----KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 F+ G YHP RS + ++ E + G GE HP++ F L P FEV + + Sbjct: 644 FKPGCGFPYHPSRSATVWLRQASSNEEEMWGELGEIHPDVQRAFDLPQPAMIFEVSSNPL 703 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-----IIKNVDRLIDDVTV 749 Q+ T + L P RDLA + IPA +V+ I++ L + V Sbjct: 704 ---QRAMADTPRFRSLPRFPPTGRDLAVV----IPAEVMVDSIQRAILEEGAPLAQEAVV 756 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV G + +G+KSVA ++ + + T +++ + +RIV + ++ A LR Sbjct: 757 FDVHVGDPVPKGRKSVAFALIYRSAERTLTGEEVNEVHERIVSRLSREFQAQLR 810 >gi|71910401|ref|YP_281951.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS5005] gi|71853183|gb|AAZ51206.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS5005] Length = 806 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ + LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPADGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK + L + ++L Sbjct: 594 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKGN-LDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|139474044|ref|YP_001128760.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes str. Manfredo] gi|134272291|emb|CAM30544.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes str. Manfredo] Length = 801 Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 243/831 (29%), Positives = 424/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIASDK-----VLTYASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFAEITKFPAMTRDIALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 751 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 801 >gi|289422360|ref|ZP_06424206.1| phenylalanyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] gi|289157195|gb|EFD05814.1| phenylalanyl-tRNA synthetase, beta subunit [Peptostreptococcus anaerobius 653-L] Length = 797 Score = 343 bits (881), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 251/832 (30%), Positives = 416/832 (50%), Gaps = 65/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M +L WL+D++D DV ++ D +T G + E V+ E + + K+L + +PD + Sbjct: 1 MLVSLKWLRDYVDIDVDAKEFGDLMTMTGTKTETVEFYGEEIENVVVAKILEIAEHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ IQ+V GA N++VG A G+ +P I N K+RG+ S GMM Sbjct: 61 KLVVTQVDAGQGSPIQIVTGAKNIKVGDYIPLAIDGAVLPGGIKIKN-SKLRGVASNGMM 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS KEL + + + I+++ G + + L L+D +ID LT NR DC Sbjct: 120 CSAKELGIDEKFVEDYKKNGIYILDMEDSYETGKDVKEVLGLTDAVIDFELTSNRPDCRC 179 Query: 171 VRGIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + GIA + A LGK EI++ E I ++IK + D LC + V V+ Sbjct: 180 MIGIARE-AAVTLGKNTKYPEISVKEEADKE-IDVDIKIESPD--LCTRYMARRVTDVKI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P WM++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V+ A GEK Sbjct: 236 EKSPYWMQRRLIEAGVRPINNIVDITNFVMLEMGQPMHAFDMREIGNNKIVVKNAVKGEK 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD QE DL D ++I + + IAGI+GG +G ++T +++ E A+++ NI +S Sbjct: 296 FTTLDKQERDLDEDMLMITNGEKTLGIAGIMGGLDSGVKEDTVEIMFESAVFNKENIRKS 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 K LG+ +++ RFE+GV + L+ V L+ L G + KP + + Sbjct: 356 SKKLGLRSEASSRFEKGVSEENAALALERAVQLVELLGAGKVMKGVVDVYPNPKPAQTIT 415 Query: 407 MN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEIL 464 +N + + + G+D+P++ +I+E L F + D+ + VP++R D+E++AD+ EEI Sbjct: 416 VNPTRINKRIGVDIPMDRFCKIMEDLEFKCDLKSDQELVLEVPAFRLDIEQEADIFEEIA 475 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS---RAMMEVVNWSFIS---- 517 RIYG I P Q++ ++ + +++ +V + M E++ +SF+S Sbjct: 476 RIYGFANI-----PSIQLQGNTTAGVKTDKQKFLDKVKTTAIGSGMYEILTYSFVSPKGL 530 Query: 518 -----KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 E S L + +++LNP+ D S MRT+L+P ++ N+ I ++FE Sbjct: 531 DKIMVPEDSNL----RDVVKLLNPLGEDTSIMRTTLIPNMMDVITTNISHNIDTASVFEC 586 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 HV+ TP AG+ + + G DK D F K + E Sbjct: 587 GHVF---TPTDM----AGVEETRICL---GMYGEDK--------DFFTLKGVLDRIFERV 628 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 D + +HPGR I + E LG GE HP +L+ +G+S + E+ LD Sbjct: 629 GIKDQTYLADKTNTSFHPGRCADI-LAGETFLGTIGEIHPYVLENYGISKRVYIAEIKLD 687 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 + R T L RD+A +V + G++ +I N L++ +FD Sbjct: 688 EV---YTHRNDTIIFKALPKFPASSRDIALLVKDQVSVGSIEEVIMSNGAGLVEACELFD 744 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++G + EG KSVA + + L+ T DD+I + +I+E + K+ +A LR Sbjct: 745 VYKGDQIEEGYKSVAYSISYRSLEKTLTDDEISPVHSKILEELEKELDAKLR 796 >gi|55981928|ref|YP_145225.1| phenylalanyl-tRNA synthetase subunit beta [Thermus thermophilus HB8] gi|135117|sp|P27002|SYFB_THETH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|66773871|sp|Q5SGX1|SYFB_THET8 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|2781286|pdb|1PYS|B Chain B, Phenylalanyl-Trna Synthetase From Thermus Thermophilus gi|6980403|pdb|1B7Y|B Chain B, Phenylalanyl Trna Synthetase Complexed With Phenylalaninyl- Adenylate gi|7245470|pdb|1EIY|B Chain B, The Crystal Structure Of Phenylalanyl-Trna Synthetase From Thermus Thermophilus Complexed With Cognate Trnaphe gi|7245815|pdb|1B70|B Chain B, Phenylalanyl Trna Synthetase Complexed With Phenylalanine gi|16974899|pdb|1JJC|B Chain B, Crystal Structure At 2.6a Resolution Of Phenylalanyl-Trna Synthetase Complexed With Phenylalanyl-Adenylate In The Presence Of Manganese gi|85544103|pdb|2AKW|B Chain B, Crystal Structure Of T.Thermophilus Phenylalanyl-Trna Synthetase Complexed With P-Cl-Phenylalanine gi|85544105|pdb|2ALY|B Chain B, Crystal Structure Of T.Thermophilus Phenylalanyl-Trna Synthetase Complexed With 5'-O-[n-(L-Tyrosyl) Sulphamoyl]adenosine gi|85544107|pdb|2AMC|B Chain B, Crystal Structure Of Phenylalanyl-Trna Synthetase Complexed With L-Tyrosine gi|254575007|pdb|3HFZ|B Chain B, Crystal Structure Of Thermus Thermophilus Phenylalanyl-Trna Synthetase Comlexed With M-Tyrosine gi|48252|emb|CAA46560.1| phenylalanine--tRNA ligase [Thermus thermophilus] gi|48255|emb|CAA78105.1| Phenylalanyl tRNA Synthetase,beta subunit [Thermus thermophilus] gi|2624414|emb|CAA75645.1| phenylalanyl-tRNA synthetase (beta subunit) [Thermus thermophilus] gi|55773341|dbj|BAD71782.1| phenylalanyl-tRNA synthetase beta chain [Thermus thermophilus HB8] Length = 785 Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 243/802 (30%), Positives = 397/802 (49%), Gaps = 38/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ SWLK ++ S E + + L +G E ++++ R P +V +E +P Sbjct: 1 MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIE-RVFPIPRGVVFARVLEAHPIPGT 59 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 + R+ + ++VV GA N R G+ A PG+ +P V R I+G+ S GM S Sbjct: 60 RLKRLVLDAGRTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALS 119 Query: 121 EKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL + + ++E P DA P G LS+ + ++D+ +TPNR D +G+ G+A DL Sbjct: 120 PRELGVGEYGGGLLEFPEDALPPGTPLSEAWP-EEVVLDLEVTPNRPDALGLLGLARDLH 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G + L +E++PL ++D F + G+R +P WM++ L Sbjct: 179 ALGYAL---VEPEAALKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALF 235 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A G+R I+ +VD+TNYV L+R P H FD + + + VRRA GE++ LD E L P Sbjct: 236 AAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHP 295 Query: 300 DNVVIAS----DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +++VIA + +AG++GG + ++T + +EVA +DP++I ++ + G+ T+ Sbjct: 296 EDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTE 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + +RFERGVD G +P + +SL+ +L G ++ + P I F RL Sbjct: 356 ASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLL 415 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G P + + IL+RLG V GE + V+ PS R D+ + DLVEE+ RI G + I Sbjct: 416 GTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLA 475 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 D R + + + ++ VL+ EV +SF+ E + F L +LN Sbjct: 476 LPAFFPAPDNRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLN 535 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFA-IFEVSHVYENDTPEGQKYMAAGIRKG 594 P++ + + +RT L PGL++ N+D + A +FEV V+ E ++ AG+ G Sbjct: 536 PLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFR----EREETHLAGLLFG 591 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRS 653 EG G W ++ER L +AL F L + R E+ A + HPG S Sbjct: 592 ----EGVGLPW---AKERLSGYFLLKGYLEAL-----FARLGLAFRVEAQAFPFLHPGVS 639 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G + E V G+ G HP I L P+ FE+ L P+ K H ++ Sbjct: 640 GRVLVEGEEV-GFLGALHPEIAQELELP-PVHLFELRL---PLPDKPLAFQDPSRHPAAF 694 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 RDLA +V P G + +++ ++ + +FD++QG L EG KS+A + + Sbjct: 695 ----RDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFR 750 Query: 773 PLKDTFRDDDIRILMDRIVENV 794 K T RD+++ + R+ E + Sbjct: 751 HPKRTLRDEEVEEAVSRVAEAL 772 >gi|323127003|gb|ADX24300.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 801 Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 243/831 (29%), Positives = 424/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ + LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPADGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIASDK-----VLTYASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLASMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVTELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 751 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 801 >gi|312865116|ref|ZP_07725344.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus downei F0415] gi|311099227|gb|EFQ57443.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus downei F0415] Length = 801 Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 248/838 (29%), Positives = 430/838 (51%), Gaps = 72/838 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V++ + LS + +VL+ + P+ Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVESPAQGLSKIVVGEVLTCQDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPN++ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEEPRQIVCGAPNIKAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL +S+ S I LP DA G + YL+L D I+++++TPNR+D + +RG Sbjct: 120 SLQELGISESVVPKEFSDGIQILPEDAVPGQSVFPYLDLDDEIVELAITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K+++ +S+ + + I+ D +L + V+ V Sbjct: 180 VAYE-VAAIYGKTVHLPEKQVHEIDRQASDKLAVAIE---SDKALT--YKARLVENVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ +D + R+A + EK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYAKFADKTILARQARANEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L D++VI+ + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEERQLQTDDLVISVSDQAVALAGVMGGQSTEIDANSKTVVLEAAVFDDQSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ + L +++ L GG + A ++ +P ++ Sbjct: 354 SRLNLRSESSSRFEKGVNYDTVGQALDFAAAMLEELAGGQVLAGRVEAGSLPTEPVQVSS 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ + D + L FS+ G+ D F V+VP R D+ +ADLVEEI RI Sbjct: 414 SLDYVNVRLGTDLTMADIQDVFASLDFSLTGDADHFTVTVPRRRWDISIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D LP T E L+ Q R V+ + + E+++++ + E++V Sbjct: 474 YGYDN-----LPTTLPEATGTAGELTASQKLRRKVRTLAEGAGLSEIISYALTTPEKAVQ 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F + E++ P+S + S +R +++ G+L NV R D AI+E+ V+E Sbjct: 529 FTQNPTNVTELMWPMSIERSALRQNVVAGMLDTIAYNVARKNKDVAIYEIGKVFEQKGNP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKA------DALSVI 629 D P +A + L SDK + + VD F K D L V Sbjct: 589 KEDLPTELDTLALAMTG----------LVSDKDFQTKAVAVDFFHLKGILEALFDKLDVR 638 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 FV S+ + HPGR+ + + + G+ G+ HP + +G+ E Sbjct: 639 PDFVPDKSM-------AAMHPGRTASLVLDGQTI-GFLGQVHPEVAKDYGIP------ET 684 Query: 690 YLDSIPIS--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLID 745 Y+ I ++ Q K V ++ V RD+A +V Q + +++ I+ V RL Sbjct: 685 YVAQINLTALQAKLQPVSAFVEITKFPSVSRDIALLVGQTVSHQAILDAIQAAGVKRLT- 743 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D +FDV+ G ++ GKKS+A + Q D D+++ M++I +++ +K A +R Sbjct: 744 DTKLFDVYAGHNIEHGKKSMAYSLTFQNSNDNLTDEEVAKYMEKITKSLTEKVAAEVR 801 >gi|86610336|ref|YP_479098.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. JA-2-3B'a(2-13)] gi|93140714|sp|Q2JHU3|SYFB_SYNJB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|86558878|gb|ABD03835.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. JA-2-3B'a(2-13)] Length = 825 Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 246/846 (29%), Positives = 416/846 (49%), Gaps = 63/846 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ +D +S E++ + LT G EVE++++R + ++ ++L+ E +P+ D Sbjct: 1 MRISLKWLRELVDFQLSPEELGEALTLAGFEVEEIEDRRTWADGVVLGRILAAEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +VCGA N R G+L A PG+ +P ++ + RG+ S GM+ Sbjct: 61 KLQVCQVDLGSDRPATIVCGAANARPGILVAVATPGTHLPALSLTIAKADKRGVISEGMI 120 Query: 119 CSEKELMLSDDSASIMELPID-----APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL L S I E P D P+G + L L D ++D++ T NR+D + + G Sbjct: 121 CSLAELGLEKSSEGIHEFPPDLDLEAHPLGSDVRPLLGLDDVVLDLTSTANRADALSMVG 180 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 IA ++ A L+ + PL ++ IP + + D+ C ++ ++GV+ +P+W Sbjct: 181 IAREVAALTRNPLRLPPVQ-PLQAKPIP-NFQLRIADAKACPAYSGVLIEGVKVGPSPDW 238 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL-------TVRRACSGEK 286 ++ RL A G+RSI+ +VDITN + L+ G P H FD R+ V+ VR A GE Sbjct: 239 LKHRLAAAGMRSINNVVDITNLILLEWGQPLHAFDWDRLLQVMGKKKPTIEVRLAQPGET 298 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD Q L D+ +I + + ++AG++GG+ TT + +E AL+DP RS Sbjct: 299 LKTLDGQTRTLQADSHLIVAGSQPVALAGVMGGEETEVGSTTTRIFLEAALFDPAVTRRS 358 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ G+ T++ R+ERGV+ + V LIL L GG + + R + Sbjct: 359 ARSQGLRTEASTRYERGVNFATLDQARDRAVQLILELAGGAVAGLTTFDQRPPLERTLKL 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDK----------------FEVSVP 447 S + + G +V D IL LGF + G + ++V VP Sbjct: 419 RLSRLIDVLGDEVQAADVEEILSALGFQLSRCEGANSQSALSPATETATVASCVWQVVVP 478 Query: 448 SWR-QDVEEKADLVEEILRIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASR 505 +R +D+E + DL+EE R+YG D+ SE LP QV +LS +++ TR ++ VL Sbjct: 479 PYRLRDIEREIDLIEEFARLYGYDRF-SETLPTEPQVG---SLSARETFTRQIREVLRGI 534 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + EV + S E+ + I NP+S + S +R +LLPGL++A N D+ Sbjct: 535 GLTEVYHISLCPAEEDGSL------VRIANPLSPEYSAVRNALLPGLVEAFRFNWDQGNG 588 Query: 566 DFAIFEVSHVYENDTPEG-QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE+ V+ + P Y A G G + + W + R R +D F+AK Sbjct: 589 PLQAFEIGRVFAHALPPNPHPYREAEHIGGILGGDPNPHDW----QHRNRPMDWFEAKGL 644 Query: 625 ALSVIE-----PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 +S +E P LD +S S HPGR + + G FG+ HP + G Sbjct: 645 LVSALERLGFGPEFRLDPPEEQS---SLLHPGRQASLWIEGSRI-GLFGQLHPRLCQEKG 700 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 L + + GFE+ LD + + +R + V S RD+AF + G + +I+ Sbjct: 701 LPDQVYGFELQLDPL-LESLERRGIVQFVPFSPFPAADRDIAFFAPLDLAVGEIEKVIRR 759 Query: 740 V-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 L+ V +FD ++G+ + G++S+A +++ + T D ++ L +++ + + Sbjct: 760 AGGELLQSVQLFDEYRGQGVPAGQRSLAFRLVYRAPDRTLTDAEVEALQNQVRAQLATQF 819 Query: 799 NAVLRS 804 LRS Sbjct: 820 PVTLRS 825 >gi|325288442|ref|YP_004264623.1| phenylalanyl-tRNA synthetase beta subunit [Syntrophobotulus glycolicus DSM 8271] gi|324963843|gb|ADY54622.1| phenylalanyl-tRNA synthetase beta subunit [Syntrophobotulus glycolicus DSM 8271] Length = 804 Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 255/824 (30%), Positives = 429/824 (52%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +L+WL+ +LD + S E I LTS G+EVE+++N + S I ++ ++++P+ + Sbjct: 1 MKVSLNWLRQYLDLEDSAETIAQILTSGGIEVERIENLNKGFSKVVIGEITGLQKHPNAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ +E+ +V GA N+R+ A G+ +PE + + K+RG+ES GM+ Sbjct: 61 KLQICKVNVGE-EELVIVTGADNIRLDDRIPVALCGARLPEG-LKIKPAKLRGVESFGML 118 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CSEKEL + + + I+ LP P+G + +YL L+D +I++ L PNR DC+ + Sbjct: 119 CSEKELGIDSSAGTERSKGGILILPGKPPLGMDIGEYLGLNDWVIELELYPNRPDCLAMV 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESI-PLEI-KFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A +L K K + + L S P E + +++ L ++ V+ V + Sbjct: 179 NVARELGTLVRQKPK-LPVWADLQGPSWEPAESPQILIENPELSWRYSALLVEDVCIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+ RL+A G+R I+ +VDITNY L+ G P H FD +++ + VR A GEK+++L Sbjct: 238 PVWMQNRLRAAGVRPINNIVDITNYCMLEMGQPLHAFDLDKLNGQIRVRTARQGEKLVSL 297 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + L +VIA D +IAG++GG + TT VL E A + ++ R+ + L Sbjct: 298 DGVDRVLESGMLVIADDKGPVAIAGVMGGLDTEVTEGTTRVLFESAHFLGASVRRTSRRL 357 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-VFMNS 409 G+ ++S RFE+GV+ G +P L + L+ L G + + + P+++ V +N Sbjct: 358 GLRSESSNRFEKGVNPYGTVPTLGRVAELLKELKAGRV--VGFTEKVCHLPQQLEVKLNL 415 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 E R+ G ++ E+ +L L F + ++F V +PS+RQD++ + D++EE+ RI Sbjct: 416 EKTSRVLGFEIKKEEMCDVLAALDFPYEEVQKNQFAVKIPSYRQDIKIEEDMIEEVARII 475 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G DQI + LP + Q R R ++ +L + EV+ +SF+ KEQ +G Sbjct: 476 GYDQIPTT-LPGGSLTQGHKNPAQLFR-RKIRHLLVGLGINEVLTYSFVKKEQDFKWGKQ 533 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTP--EGQ 584 + + +LNP+ + MRTSLLPGLL+ RN R D IFE+ HVY D P E Sbjct: 534 SKSVSLLNPLREETGVMRTSLLPGLLEVAARNTARRNLDCLIFEIGHVYLAKDHPIKELP 593 Query: 585 KYMA--AGIRKGSSGIEGSGRLWSDKSEERCRFV--DLFDAKADALSVIEPFVSLDSLRF 640 +A AG+ G+ + R W + E + L D A+ ++ + D + Sbjct: 594 HEIAKIAGLAVGT-----TSRHWLNPQMEYDFYYVKGLLDTIAEHCAIRFRYQRTDDEKL 648 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 S HPGRS I E+ G+FGE HP + +G+ P+ FE+ D + + Sbjct: 649 R----SLLHPGRSAEIFI-GEVKAGFFGELHPLLEAEWGMERPVV-FELDFDLLAGHSSE 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLG 759 + + ++RDLA +V + A + + I++ L+ V +FDV++G + Sbjct: 703 NIIGRSYTRFPA---IQRDLAVVVQDKVSAEEIKSRILQLGGELLHKVEIFDVYKGNQVP 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + + T DD++ L I+E + K+ A R Sbjct: 760 AGHKSLAFSLKYLSPERTLTDDEVSSLNIVILEAIQKEFGAEWR 803 >gi|322375857|ref|ZP_08050368.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] gi|321279125|gb|EFX56167.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. C300] Length = 801 Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 427/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPQDAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ S + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNESAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L+ ++VI + ++AG++GG+ +N++ V++E A+++ +I ++ Sbjct: 296 LDGEERELAETDLVITVADKPVALAGVMGGQATEISENSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIRAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 VGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|302533480|ref|ZP_07285822.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. C] gi|302442375|gb|EFL14191.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. C] Length = 842 Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 265/873 (30%), Positives = 415/873 (47%), Gaps = 99/873 (11%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPAGETGRDVAAKLVDAGLEVETVETLGAGLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 R P C + TG+ QEI VCGA N VG V PG+ +P + I + RK Sbjct: 61 GFRKPIRFCTVDVGTANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLPGDFAIAS-RK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS +EL + DD + I+ LP + G + L+L D ++D+ +TP+R Sbjct: 118 TYGKTSHGMICSGEELGMGDDGTHGIIVLPPEYEPGTDAIELLQLVDEVLDIDITPDRGY 177 Query: 168 CIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 C+ +RG+A + A L++ +++ P S + D + C F V G Sbjct: 178 CMSMRGVAREAATAYGLPLRDPALLDVPAPNS-----YGYAVQISDPAGCDRFTARTVTG 232 Query: 225 VRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + +P W+ +RL+ G+R IS VDITNYV L+ G P H +D SR+ + VRRA Sbjct: 233 LDPEARSPIWLTRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRSRLDGAIGVRRAEQ 292 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKH-----------AGCDDNTTDVL 332 GEK LD + L +++VI +AG++GG + G TTDV+ Sbjct: 293 GEKFTTLDGVKRTLDAEDLVITDSSGPIGLAGVMGGANTEIADSVTDPETGAVTGTTDVV 352 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A +DP++I+R+ + L + +++ RFERGVD Q + V L++ L GGTA Sbjct: 353 IEAAHFDPVSISRTARRLKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGV 412 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 PR I R++G++ E +R L+ +G V G+ D+ V+VPSWR D Sbjct: 413 TELTAPGAPRTIAMSADHPDRVAGMEYGRETVVRRLQEIGCDVYGQ-DELVVTVPSWRPD 471 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + E DL EE++R+ G + P L QV R L+ +Q R V R LA +E ++ Sbjct: 472 LAEPNDLAEEVIRLEGYGNL---PSTLPQVPSGRGLTARQQLHRRVGRALAGAGYVEALS 528 Query: 513 WSFISKE-----QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + FI + Q ++ ++++NP+S + +RT+LLPGLL A RN R D Sbjct: 529 YPFIGEAVFDQLQLPAHDASRQVVKLVNPLSDEEPALRTTLLPGLLGALRRNDSRGSHDL 588 Query: 568 AIFEVSHVYENDT--------------------------PEGQKYMA---AGIRKGSSGI 598 A+FE V+ P +Y A AG R+ +G Sbjct: 589 ALFETGSVFRAAAEAGVAVRLPVDRRPTDEEVATLDAALPAQPRYAAVVLAGARE-QAGW 647 Query: 599 EGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-- 654 G GR W+D + A AL+V + L G +HPGR Sbjct: 648 WGKGRPADWADAVQ-----------AARALAV----EAGAELVVRQGQYGPWHPGRCAEL 692 Query: 655 -IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + E V+G+ GE HP ++ GL E+ LD + + + + ++ S+ Sbjct: 693 VVTLDGVEQVIGHAGELHPRVVKAMGLPARTSAMELDLDRLAAAGGEVVQAPRI---STF 749 Query: 714 HPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A IVD +PA + + + K L++ + +FDVF G+ +GEGKKS+A + + Sbjct: 750 PVATQDVALIVDASVPASAVEDALRKGAGELLESLRLFDVFTGEQVGEGKKSLAYALRFR 809 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V ++T AVLR + Sbjct: 810 AADRTLTAEESTAARDAAVALAGERTGAVLRGA 842 >gi|15674815|ref|NP_268989.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes M1 GAS] gi|30316278|sp|Q9A0I0|SYFB_STRP1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|13621946|gb|AAK33710.1| phenylalanyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes M1 GAS] Length = 801 Score = 343 bits (880), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ + LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPADGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK + L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKGN-LDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-SIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 751 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 801 >gi|220917095|ref|YP_002492399.1| phenylalanyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] gi|219954949|gb|ACL65333.1| phenylalanyl-tRNA synthetase, beta subunit [Anaeromyxobacter dehalogenans 2CP-1] Length = 800 Score = 343 bits (879), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 254/821 (30%), Positives = 417/821 (50%), Gaps = 38/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ +L WL +++D E++ LT++G E+E V+ A L ++ + E +P+ + Sbjct: 1 MRISLKWLSEYVDLPAP-EELARRLTAVGFEIEAVERTGAGLKGVVAARIAASEPHPNAE 59 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + +QVVCGA N +VG + A G+ +P I K+RG+ES GM+ Sbjct: 60 KLSVTRVDAGGGEPLQVVCGAKNYQVGDVVPLATVGAELPGGTKISKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS D+ ++ LP G + + L L D + +V++TPNR D + GIA + Sbjct: 119 CSARELGLSADATGLLILPPGTVPGTPIGEALGLDDVLFEVNVTPNRPDALSHVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 VAA LG+ ++ + P E + +K ++ C +A V+GV+ +P W+ Sbjct: 178 VAALLGQ--KVRLPRPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLA 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 QRL+ G+RSIS +VD TNYV L+ G+P H FD ++ + VR A GE+I LD ++ Sbjct: 236 QRLERCGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKD 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD+++IA R ++AG++GG + TT VL+E A + P + R+ + G+ + Sbjct: 296 RALEPDDLLIADRDRGSALAGVMGGGDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKR 413 ++ YRFERG D +IP L +LI L GGT + + A+ ++ + Sbjct: 356 EASYRFERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKAREVASPEVRMRWDRPAQ 415 Query: 414 LSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ V ED+ RIL LGF + D VPSWR DV + DLVEEI+R G D I Sbjct: 416 VLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLGYDAI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRE 530 E LP V + Q R + L + E VN+SF++ + + G Sbjct: 476 P-ETLPGPAVRTPAESAEAQGVGR-ARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGG 533 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-------ENDTPEG 583 + + NPISAD++ MRTSL+P LL+ N + + D ++E++ Y D+P Sbjct: 534 IALRNPISADLAVMRTSLVPSLLRNAAHNRRQRVEDVRLYEIARAYGPRAAGAAGDSPGH 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + AG+ G G W+ + D DAKA ++E S + + Sbjct: 594 EATEVAGVLLGRRSPVG----WAVGGD----VADFHDAKAAVQGLLEALGVEAS--WSAP 643 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W HP S ++ LG GE HP + + F L + F + LD++ + + + Sbjct: 644 GPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLVPQ 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + + L + V RD+A +V+ + A + +++ + L++ V +FDV++G L G+K Sbjct: 704 YRPIPRLPA---VLRDVAVVVEDAVTAAAVEVLVRE-EPLVEAVILFDVYKGAPLPAGRK 759 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++A+ + + T D + RIV + ++ A LR Sbjct: 760 NLALAITYRAPDRTLTDAEADAAHARIVARLRERVGAELRG 800 >gi|257455760|ref|ZP_05620986.1| phenylalanyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] gi|257446774|gb|EEV21791.1| phenylalanyl-tRNA synthetase, beta subunit [Enhydrobacter aerosaccus SK60] Length = 804 Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 243/838 (28%), Positives = 416/838 (49%), Gaps = 70/838 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + +WL+ + ++S E+I + LT GLE++ +D + S + +V+ V ++PD D Sbjct: 1 MKISENWLRQWANPNLSAEQIGEQLTMAGLELDSLDKVAKEFSGVVVGEVIDVTQHPDAD 60 Query: 60 -CAILRIDTGKHQE--IQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRK-- 108 + +++ G+H E +Q+VCGAPNV G L+G PP + + N++K Sbjct: 61 KLRVAKVNVGEHSEAPLQIVCGAPNVAAGVRVPVALVGAKLPPA----QGDEPFNIKKGK 116 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG+ES GM+C E+ D ++ LP DAP+G + YL L + ++D+S+TPNR DC Sbjct: 117 LRGVESHGMLCGGSEIDCDDGVDGLLILPNDAPIGMDIRAYLGLDNHVLDISITPNRGDC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPL----------SSESIPLEIKFDLDDSSLCKGFA 218 VRGIA +L L ++ P +S+++ +E ++ C + Sbjct: 177 FSVRGIARELAV-----LNDLAFQLPFDHITAAVTDNASQAVSVE-------TTDCPRYY 224 Query: 219 MCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT 277 V G+ +P+WM++ L A G++ + LVD+TNYV L+ G P H FDA ++ + Sbjct: 225 AQLVSGLTGTTPSPDWMKKALNASGVKPRNLLVDVTNYVLLELGQPLHAFDADKLVGAII 284 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 VR A GE + L+ Q L D +VIA + + ++AGI+GG D+TT V++E A Sbjct: 285 VRHAQQGETLELLNEQTISLQGDELVIADEQGVIALAGIMGGLRTAVTDSTTRVVIESAF 344 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICI 393 + + IA + G+ TD+ RFERGVD + L V+L+ + G++ I + Sbjct: 345 FKQLAIAGKARRFGLHTDASQRFERGVDFELPKLALDRAVNLLATFGNGSSEVRVGQITL 404 Query: 394 ARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 N P++ + + +L G D+ + ++ IL L S + + + PS R Sbjct: 405 VENTAELPKRTPVTLPIVSINKLLGADIATDKAIEILNSLQISTELQGENLVATPPSHRF 464 Query: 452 DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ DL+EEI RIYG + I ++ P + + D + +Q+ +K L ++ E Sbjct: 465 DIALPEDLIEEIARIYGYNNIANKLPAFTSNLFDNK----RQNDLHNLKMSLVNQGYFEA 520 Query: 511 VNWSFISKEQSVLFGGGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 V++SF + LF G L + NPIS+D++ MR +LL LL N++R Sbjct: 521 VSFSFSDPKVEALFDGAHFAAPLALANPISSDLAVMRRTLLSSLLPCVQYNLNRQQNRVR 580 Query: 569 IFEVSHVYEND--TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE ++ Q A + GS+ E R +D +D K D Sbjct: 581 LFETGLRFDGSDIASLNQVDTLAMVAVGSTHPE---------QHHDSRVMDFYDLKNDVE 631 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 SV P + ++ ++ + HPG+S + + V+G+ G+ HP I L Sbjct: 632 SVF-PRFAQSAISYQRSQQLFLHPGQSADVHYQGK-VIGWLGQLHPQIAKALDLPTTWVA 689 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLID 745 I + Q+ T ++ S V+RD+A +VD+ I ++ + IK L+ Sbjct: 690 QLNLQAVIDMHQQALT----IMTPSKFPQVRRDIAVVVDKSIAMQSMKDTIKQAGGELLK 745 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FDV+ G +L E ++S+A ++ Q L+ T D+ I M+ ++ + ++ +A LR Sbjct: 746 EVWLFDVYAGSNLPENQQSLAFALVWQDLEATLSDERINAQMEAVIAALHEQYHATLR 803 >gi|86158394|ref|YP_465179.1| phenylalanyl-tRNA synthetase subunit beta [Anaeromyxobacter dehalogenans 2CP-C] gi|93140695|sp|Q2IJB3|SYFB_ANADE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|85774905|gb|ABC81742.1| phenylalanyl-tRNA synthetase beta subunit [Anaeromyxobacter dehalogenans 2CP-C] Length = 800 Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 255/825 (30%), Positives = 422/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ +L WL +++D E++ LT++G E+E V+ A L ++ + E +P+ + Sbjct: 1 MRISLKWLSEYVDLPAP-EELARRLTAVGFEIEAVERTGAELKGVVAARIAASEPHPNAE 59 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + +QVVCGA N RVG + A G+ +P I K+RG+ES GM+ Sbjct: 60 KLSVTRVDAGGGEPLQVVCGAKNYRVGDVVPLATVGAELPGGARISKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS D++ ++ LP G + + L+L D +++V++TPNR D + GIA + Sbjct: 119 CSARELGLSADASGLLILPPGTVPGTPIGEALDLDDVLLEVNVTPNRPDALSHVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 VAA LG+ ++ + P E + +K ++ C +A V+GV+ +P W+ Sbjct: 178 VAALLGQ--KVRLPKPGLVEGGGAAADAVKVRIEAPEKCARYAARVVEGVKIGPSPAWLA 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 +RL+ G+RSIS +VD TNYV L+ G+P H FD ++ + VR A GE+I LD ++ Sbjct: 236 RRLERCGIRSISNVVDATNYVLLELGHPLHAFDLDEVAGHEIVVRTARPGERITTLDGKD 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD+++IA R ++AG++GG + TT VL+E A + P + R+ + G+ + Sbjct: 296 RALEPDDLLIADRDRGSALAGVMGGGDSEISAGTTRVLLESAWFAPSGVRRTSRRHGLKS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK-- 412 ++ YRFERG D +IP L +LI L GGT A + + RK+ ++ Sbjct: 356 EASYRFERGADPGMVIPALDRCAALIAGLSGGTVR----AGVVDAQARKVASPEVRMRWD 411 Query: 413 ---RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ G+ V ED+ RIL LGF + D VPSWR DV + DLVEEI+R G Sbjct: 412 RPAQVLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVSIEEDLVEEIVRTLG 471 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I E LP V S + + L + E VN+SF++ GG Sbjct: 472 YDAIP-ETLPGPAVRTPAE-SAEAQAVARARAALEAAGFSEAVNFSFVAARDLEPLAGGL 529 Query: 529 RE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-------END 579 + + NPISAD++ MRTSL+P LL+ N + + D ++E++ Y D Sbjct: 530 AADGIALRNPISADLAVMRTSLVPSLLRNAAHNRRQRVEDVRLYEIARAYGPRAAGTPGD 589 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P + AG+ G G W+ + D DAKA ++E + +++ Sbjct: 590 APSHEATEVAGVLLGRRSPVG----WAVGGD----VADFHDAKAAVQGLLE-ALGVEAA- 639 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + P W HP S ++ LG GE HP + + F L + F + LD++ + + Sbjct: 640 WAAPGPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAAR 699 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLG 759 + + + L + V RD+A +V+ + A + +++ + L++ V +FDV++G L Sbjct: 700 LVPQYRPIPRLPA---VLRDVAVVVEDAVTAAAVEALVRE-EPLVEAVILFDVYKGAPLP 755 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+K++A+ + + T D + RIV + ++ A LR Sbjct: 756 AGRKNLALAITYRAPDRTLTDAEADAAHGRIVARLRERVGAELRG 800 >gi|306827625|ref|ZP_07460905.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] gi|304430188|gb|EFM33217.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pyogenes ATCC 10782] Length = 806 Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV + + L++ G+EVE ++ E LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVIPAALAEKLSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNILT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDTNSQTVVLEAAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L+ Sbjct: 594 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQVVDFYHAKG-ILDTLFANLNLN 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGVTIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|291009832|ref|ZP_06567805.1| phenylalanyl-tRNA synthetase, beta subunit [Saccharopolyspora erythraea NRRL 2338] Length = 830 Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 262/839 (31%), Positives = 406/839 (48%), Gaps = 88/839 (10%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVERNPD 57 M+ +SWL +HL+ + + E + + IGLEVE+V + ++ P + +V +E D Sbjct: 1 MRIPVSWLAEHLELPEETTAEALAEAFVRIGLEVEEVTHLSSVRGPLVVGRVAEIEELTD 60 Query: 58 LDCAILRI-------DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 I ++G+ + +++CGA N R G L V A PG+ +P I RK Sbjct: 61 FKKPIRYCQVEVGEDESGEKRTQEIICGATNFREGDLVVVALPGTVLPGGFEIAE-RKTY 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 G S GM+CS KEL + +D I+ LP A G + + L D +I++++TP+R C Sbjct: 120 GRMSRGMICSAKELGIGEDHDGILVLPSGSADPGDDAVELVGLDDAVIELAITPDRGYCF 179 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 VRG+A +L A + S P+ ++ P ++ D S C F V GV Sbjct: 180 SVRGLARELSNALEVPFGDPG-SLPVPADDRPSR-SVEIADPSACSRFVFRRVTGVDPTA 237 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P WMR+RL G+RSIS VDITNYV L+ G P H +DA++++ + VRRA +GEK+ Sbjct: 238 PTPWWMRRRLALAGIRSISLAVDITNYVMLELGQPLHAWDATKLAGDIVVRRAKAGEKLT 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ E +L PD+VVI D S+AG++GG T DVL+E A WDP +IAR + Sbjct: 298 TLDDVERELDPDDVVICDDSGPVSLAGVMGGASTEIGSETHDVLLEAANWDPASIARMIR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFM 407 + +++ RFER VD + PV + + +L G GT + P + Sbjct: 358 RHKLPSEAGKRFERSVD-PAVAPVATELAAQLLVRYGEGTIAQGRTDVGEPKAPAPVTMP 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKADLVEE 462 + R++G++ + R L ++G + + D+ + PSWR D+ + ADLVEE Sbjct: 417 LALPDRIAGVNYERGVTARRLTQIGCRIEVSTSDEGVGLVTATPPSWRPDLAQPADLVEE 476 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +LR+ G I S L R L+ Q R R V R LA +EV+ + F E V Sbjct: 477 VLRLEGYHTIPSV---LPAAPPGRGLTPAQRRHRAVSRTLAHEGYVEVLPFPFTGPE--V 531 Query: 523 LFGGG-------QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 L G G +R L +LN + +D S + T++L GL+ A RNV R D A+F V V Sbjct: 532 LDGLGIGADDPRRRTLSLLNALESDRSELSTTVLTGLIDALKRNVARGRRDLALFHVGQV 591 Query: 576 YENDT-----------------------------PEGQKYMAAGIRKGSSGIEGSGR--L 604 + P + AG R+ +G G GR Sbjct: 592 VQPAAEQPAVPRVGVSQRPSDAEIEALHASLPAQPTHVGVVLAGQRE-HAGWWGKGREVS 650 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 W+D E R + L +G + +HPGR +K + V+ Sbjct: 651 WADAVEAARRVAAAAGVE---------------LTISAGDLAPWHPGRCAELKV-GDTVV 694 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ GE HP +++ GL C E+ LD++P++ + +S+ PV D+A +V Sbjct: 695 GHAGELHPKVVEALGLPKRTCAMELDLDALPLTDDRPAPV-----VSAYPPVLLDIALVV 749 Query: 725 DQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 D +P+ LV+ + K L++DV +FDV+ G+ L GKKS+A+ + + T + D+ Sbjct: 750 DASVPSAELVDTVRKGAGELVEDVRLFDVYSGEQLESGKKSLAMALRFRAPDRTLKQDE 808 >gi|319744874|gb|EFV97208.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus agalactiae ATCC 13813] Length = 801 Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 241/825 (29%), Positives = 431/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ D ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIDSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVF 406 L + ++S RFE+G++ + + +++ L GG + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + E++ P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ Sbjct: 532 QPTNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFES 642 + + + + +G + + + + VD F AK ++E + LD Sbjct: 591 DLPTEVETFTFAL--TGLVEEKDFQTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQ 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPGR+ I + + G+ G+ HP + P E Y+ I +S + Sbjct: 645 KGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQY--DTP----ETYVAEINLSTIESQ 697 Query: 703 KTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSL 758 + ++ ++ V RD+A ++ + + +V+ I++ V RL + +FDV+ G ++ Sbjct: 698 MNQALIFEDITKYPSVSRDIALLLAESVSHHDIVSAIESSGVKRLT-AIKLFDVYAGNNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ M++I +++V+K NA +R Sbjct: 757 SEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 801 >gi|239978522|ref|ZP_04701046.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces albus J1074] gi|291450418|ref|ZP_06589808.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces albus J1074] gi|291353367|gb|EFE80269.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces albus J1074] Length = 841 Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 262/867 (30%), Positives = 413/867 (47%), Gaps = 88/867 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L + GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVAAGLEVETVEQLGAGLTGPLVVGEVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG QEI VCGA N VG V PG+ +P + + RK Sbjct: 61 GFKKPIRFCTVDVGTANGTGLPQEI--VCGARNFAVGDKVVVVLPGAVLP-GDFAIAARK 117 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL + D I+ LP + G + LEL+D ++D+++TP+R C Sbjct: 118 TYGKVSHGMICSSDELGMGSDGDGIIVLPPEYEPGTDAIELLELADEVLDIAVTPDRGYC 177 Query: 169 IGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + +RG+A + A L++ +++ P ++E P+E+ D C F V G+ Sbjct: 178 LSMRGVARETATAYGLPLRDPALLDVPGP-NAEGHPVEVA----DPFGCDRFTARTVSGL 232 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 +P W+R+RL+ G+R IS VDITNYV L+ G P H +D SR+ L VRRA G Sbjct: 233 NPEARSPIWLRRRLQKAGMRPISLAVDITNYVMLEVGQPLHAYDRSRVQGALGVRRAEPG 292 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK-----------HAGCDDNTTDVLV 333 EK+ LD L P+++VI + + +AG++GG G TT+V++ Sbjct: 293 EKLTTLDGVRRTLDPEDLVITDERGVIGLAGVMGGADTEIADAAPDPQTGRVSGTTEVVI 352 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +DPI IAR+ + + +++ RFERGVD + V L++ L GTA Sbjct: 353 EAAHFDPIAIARAARRHKLPSEASKRFERGVDPLAAPAAAQRTVDLLVLLADGTAGAGVT 412 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 P + +++G+ E +R L+++G V G+ D V+VPSWR D+ Sbjct: 413 EVISPSAPHTVAMPADHPAKVAGVAYDRETVVRRLQQVGCDVYGQ-DDLVVTVPSWRPDL 471 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 DL EE++R+ G + + S L + R L+ Q R + R LA+ E +N+ Sbjct: 472 RAPNDLAEEVIRLEGYENLPST---LPKPPAGRGLTDHQRLHRRIGRALAAAGYTEALNY 528 Query: 514 SFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 FIS++ G +R + ++NP+S + +RT+LLPGLL A RN R D A Sbjct: 529 PFISEQVLDQLGLAADDPARRVVTLVNPLSDEEPALRTTLLPGLLGALRRNDGRGSHDLA 588 Query: 569 IFEVSHVYENDTPEGQKYMA--------------AGIRKG------------SSGIEGSG 602 +FE V+ P G +A A I K + E +G Sbjct: 589 LFETGLVFH---PSGHPPVAERLPVDHRPTDEQLAAINKALPVQPRHAAVVLAGAREQAG 645 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS---GIIKTS 659 W K D DA A + S L +G +HPGR ++ Sbjct: 646 --WWGKGHP----ADWADAVEAARLIAR--ESGTELLIRAGQYGPWHPGRCAELAVVIDG 697 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 E V+G+ GE HP +L GL C E+ LD++ + T T + +++ +D Sbjct: 698 DERVVGHAGELHPRVLKALGLPARTCAMEIDLDAV---EAAGTGTVEAPRIATFPVATQD 754 Query: 720 LAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +VD +PA + +++ L++ + +FDVF G+ LGEG+KS+A + + T Sbjct: 755 VALVVDAGVPAAEVEAVLREGAGELLESIRLFDVFTGEQLGEGRKSLAYALRFRAADRTL 814 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRSS 805 ++ D V ++T AVLR + Sbjct: 815 TVEEASAARDAAVALAAERTGAVLRGA 841 >gi|225352207|ref|ZP_03743230.1| hypothetical protein BIFPSEUDO_03823 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157454|gb|EEG70793.1| hypothetical protein BIFPSEUDO_03823 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 867 Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 262/884 (29%), Positives = 419/884 (47%), Gaps = 104/884 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 4 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY------------LELSDPII 157 G S GM SE+EL L D I+ L G +Y L L +P++ Sbjct: 123 YGHISNGMCASERELGLGDSHDGIILL---RKYGFTPEEYEKLQPGDDAMHLLHLDEPLL 179 Query: 158 DVSLTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSS---ESIPLEIKFDLDD 210 ++++TP+R RG++ + AA +N P++ E +I+ +DD Sbjct: 180 EINITPDRGYAFSYRGVSREYHHSTGAAYTDPAVALNEKAPITKGLPEGTKTDIEVIVDD 239 Query: 211 SSLCKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 ++ G C VKG + PNWMR+RL G+RSIS VD+TNYV LD G P Sbjct: 240 NNPIHGVVGCDRYYARAVKGFDPASHTPNWMRRRLTRAGMRSISLAVDVTNYVMLDLGQP 299 Query: 264 SHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGII 317 H +D +I + VRRA GEK+ LD +++DLS ++++I R+ IAG++ Sbjct: 300 MHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGERGSRVLGIAGVM 359 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 GG + T ++L+E A +D ++IARS + I +++ RFERGVD Q + Sbjct: 360 GGMYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMAA 419 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 L++ G S+ N R I+F SEV R++G+D + IL +G SV G Sbjct: 420 ELMVRYGNGEPSEHPTDFNTVSNRRPILFKASEVARVAGLDTDVNTISDILTDIGCSVAG 479 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 + +F V+ PSWR D+ E DLVEE+ R+ G D+I +P VE + L+ +Q R R Sbjct: 480 GGNGEFSVAPPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVEGQVGLTAEQLRKR 538 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPG 551 V LA M+E +++ F+ E F E +EI NP++ D +R ++P Sbjct: 539 QVADELAEYGMVETLSYPFVGDEDYKNFALDVAETKNVSVEIANPLAGDRPFLRRDIIPT 598 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYEND-------------TPEGQKYMA---------- 588 L + RN+ R + + +++E+ HVY D P ++ A Sbjct: 599 LAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPDQPM 658 Query: 589 --AGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 AGI G+ SG G R WSD E R D A ++LD + E Sbjct: 659 HVAGILTGNAVDSGWLGERRAVDWSDAVEAVQRISDRIGAA----------LTLDQPKAE 708 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 P+ +HPGR+ + + ++ +G GE HP++ + G FE+ L ++ + + Sbjct: 709 D-VPAQWHPGRAARV-MAGDVFVGMVGELHPHVNEVLGFPAHSAAFELDLTALFATLSGK 766 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGE 760 K + S+ PVK+DLAF V + A L +I + ++ + +FDV+ G LGE Sbjct: 767 PVQAKPI--STFPPVKQDLAFTVSTDVTAAELKQVIVDAAGSSLESIELFDVYTGDQLGE 824 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KS+A V + T +D + RIV+ K A LR+ Sbjct: 825 DEKSLAYAVTFRAPDKTLASEDSEAIRKRIVDE-ASKLGAQLRA 867 >gi|288801248|ref|ZP_06406703.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] gi|288331859|gb|EFC70342.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella sp. oral taxon 299 str. F0039] Length = 820 Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 253/838 (30%), Positives = 429/838 (51%), Gaps = 53/838 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV---EKVDN-REALSPFTIVKVLSVERNP 56 M + WLK+++D +++ + + + LTS GLEV E+V R L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFELTPQHVAEALTSCGLEVGGLEEVQTIRGGLKGLYVGKVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN--MIVNVRKIRGIE 113 + D I +D GK + Q+VCGA NV + A G + + + ++ K+RG+E Sbjct: 61 NSDHLHITTVDLGKGEPQQIVCGAHNVAANQKVIVADLGCVLYDGDKEFVIKRSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAP+G ++Y L SD +I+V +T NRSD + Sbjct: 121 SLGMICAEDEIGVGTSHDGIIVLPEDAPIGMPAAEYYNLESDWVIEVDITANRSDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSS--------ESIPLEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A LK+ N L ++ L I ++ +S CK +A + Sbjct: 181 GVARDLYAW----LKQNNYQTELHKPNCDAFKVDNESLTIDVEVKNSEACKRYACVSISN 236 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACS 283 +P W++ +LK VG+R I+ +VDITNY+ + G P H FDA ++ + V Sbjct: 237 CEVKESPEWLQNKLKIVGIRPINNIVDITNYIMMAYGQPMHCFDADMVAGHKIVVATQPE 296 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 G K + LD +E+ LS ++ I + IAGI GGK +G +NT ++++E A + P I Sbjct: 297 GTKFITLDGEEHILSERDLSICNANEAMCIAGIFGGKGSGTYENTRNIVLESAYFHPTWI 356 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 +S + G+ TD+ YRFERG+D G + LK L L GG S +++ +P Sbjct: 357 RKSARRHGLSTDASYRFERGIDPNGQVYALKQAAILCKELAGGQVS--MQIKDVYPEPIE 414 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADL 459 K+V V L G ++ + I+ L + E + + E+ +P++R DV+ D+ Sbjct: 415 GSKVVLTYDYVNLLIGKEIGKDTIKSIVTSLDMKIEAENENQIELLIPAYRVDVKRPCDV 474 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR-YVKRV---LASRAMMEVVNWSF 515 VE+ILRIYG + ++ +PL Q++ + + R R Y+ + L E++N S Sbjct: 475 VEDILRIYGYNNVE---IPL-QLKGTLTIPTDEDRNRKYINLISEQLVGGGFNEILNNSL 530 Query: 516 --ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +S + + + ++ILNP+SAD+ MR +LL G L++ RN +R ++ FE Sbjct: 531 TKVSYYKDLNCYTEETTVKILNPLSADLGVMRQTLLFGGLESIVRNANRKNSNLRFFEFG 590 Query: 574 HVYEND--TPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALS 627 + Y D E K + A + G+ +G+ W+ +E+ ++ KA + Sbjct: 591 NCYHYDESKKEADKLIKAYTQDQHLGLWVTGKRVENSWTHPNED----ASFYELKAYVEN 646 Query: 628 VIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 ++ +SL S+ G + + S I T A ++ G + G++N + Sbjct: 647 ILVRLGLSLQSVTLAKGENNIFEDSIS--IVTKAGKMIAELGVVAYKLTKNMGITNEVFF 704 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLID 745 ++Y D++ + KK K +S V RDLA +VD+ + + I + + +L+ Sbjct: 705 ADIYWDNLLKAVKKYVVEYK--EISKYPAVSRDLALLVDKTVEFEQIKEIAYSTEKKLLK 762 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++GK+L EGKKS A+ ++Q + T D I +M ++++N+ K+ NA LR Sbjct: 763 AVELFDVYEGKNLPEGKKSYAVNFILQDEQKTLNDKQIDSIMKKLIDNLTKRLNAELR 820 >gi|213692749|ref|YP_002323335.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213524210|gb|ACJ52957.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320458907|dbj|BAJ69528.1| phenylalanyl-tRNA synthase beta subunit [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 869 Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 264/871 (30%), Positives = 415/871 (47%), Gaps = 78/871 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD----- 57 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHSSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 58 -----LDCAILRIDT---GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 +DC +T G ++CGAPN++ G V PG+ +P + + RK Sbjct: 66 INWCHVDCGDEWNETDEDGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIM--------ELPIDAPVGGRLSDYL-ELSDPIIDVS 160 G S GM SE+EL L D I+ E +A G+ + +L L P+++++ Sbjct: 125 YGHISNGMCASERELGLGDSHDGIILLRQYGFSEAEYEALKPGQDAMHLLHLDQPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSL 213 +TP+R + RG+A + A +N P ++ P++I ++DD++ Sbjct: 185 ITPDRGYTLSYRGVAREYHHSTGAVYTDPAVALNEKAPEPADYQPGTPVDIDVEIDDNNP 244 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C VK N PNWMR+RL G+RSIS VD+TNYV LD G P H Sbjct: 245 IHGVPGCDRYYARIVKDFNPNAHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQPMHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D ++ + VRRA GEK+ LD +E+DLS ++++I RI +AG++GG Sbjct: 305 YDLDKLEGPIVVRRANEGEKLTTLDGKEHDLSVEDLLITDSPNGERGSRILGLAGVMGGL 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + +T ++L+E A +D + IARS + I +++ RFERGVD + L+ Sbjct: 365 YGEVTADTKNILLEAAHFDQVTIARSARRHKIPSEASRRFERGVDTALQPAATQMAAELM 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T + + I F SEV R++G+DV I IL +G +V G + Sbjct: 425 AKYGNGEPSEHPNDVNNTPRAKVIHFKASEVARVAGLDVDINRISDILTDIGCTVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +F V+ PSWR D+ E DLVEEI R+ G DQI +P VE L+ Q R R V Sbjct: 485 GEFAVTAPSWRPDLNEPCDLVEEIARLVGYDQIPIT-VPPAPVEGLVGLTPDQQRRRRVA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 LA M+E +++ F+ + FG + +EI NP+ D +R +LP L Sbjct: 544 DELAEFGMVESLSYPFVGDDDYKAFGFDPEATKKVSVEIANPLYGDRPYLRREILPTLAT 603 Query: 555 ATGRNVDRAIADFAIFEVSHVY--ENDTP-------------EGQKYMAAGIRKGSSGIE 599 RN+ R I + +++E+ HVY + D P E + AG+ + + Sbjct: 604 TVQRNIRRGIENVSLYELGHVYLWDPDAPAIPALPGGVRPTDEQLAALDAGLPEQPDHVA 663 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPSWYHPGRSG 654 G +G D R VD DA + I + LD + P +HPGR Sbjct: 664 GILTGLAEDDGWMGGKRPVDWSDAVEAVRRIAGRIGAAIELDQPAADD-VPVQWHPGRVA 722 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + ++ G+ GE HP + + G FE+ L ++ + + K + S+ Sbjct: 723 RVMV-GDVFTGWVGELHPRVNEALGFPAHSAAFELNLTALFATLTGKPVQAKPI--STFP 779 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVK+DLAF VD+ + AG L N+I K ++ + +FDVF G+ +GEGKKS+A V+ + Sbjct: 780 PVKQDLAFTVDETVTAGQLENVIRKAAGANLESIELFDVFTGEQVGEGKKSLAYAVVFRS 839 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D + IV + A LR+ Sbjct: 840 PSKTLSAEDSDAIRKAIVAEAA-EIGAQLRA 869 >gi|325954049|ref|YP_004237709.1| phenylalanyl-tRNA synthetase subunit beta [Weeksella virosa DSM 16922] gi|323436667|gb|ADX67131.1| Phenylalanyl-tRNA synthetase beta chain [Weeksella virosa DSM 16922] Length = 809 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 258/829 (31%), Positives = 420/829 (50%), Gaps = 46/829 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD----NREALSPFTIVKVLSVERNP 56 M + +WL+ +++T +S++++ LT+IGLEVE V+ N++ L I +V+SVE++ Sbjct: 1 MNISYNWLRKYINTPISVDELSAILTNIGLEVEGVEKIGGNKDYLDKVIIGEVVSVEKHN 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGI 112 + D + +I+ G + +Q+VCGAPNV +G A G+ +P + + KIRG Sbjct: 61 NADKLKVTQINFGNGEPVQIVCGAPNVAIGQKVAVATEGTQLPTKEGESFTIKKAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+CSE EL + +D++ I+ LP + +G + +Y+ + D +I++ LTPNR+D + Sbjct: 121 ESNGMICSEVELGIGEDNSGILVLPKNYQIGESILEYISIDEDYLIEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCKGFAMCCVKGV 225 G+A DL AA + E + P P E IK ++ ++ +A +K + Sbjct: 181 YGVARDLFAALKVRGYEAEFT-PYDLSQYPTENFGKNPIKSNIKNTEAAPRYASVYLKNI 239 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 +P W++ L+ +GL ++ +VDI N+V D G P H FDA +IS + V A Sbjct: 240 HVQPSPEWLQTALRTIGLTPVNNVVDIANFVMHDLGQPLHTFDADKISGQEVVVEIANKD 299 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K LD E L ++I+ + IAG+ GGK++G + TT + VE A +DP+ I Sbjct: 300 TKFTTLDGIERTLKGHELMISDTEKPMCIAGVFGGKNSGVTNETTSLFVESAYFDPVTIR 359 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK 403 + K + TD+ +RFERG+D I LK V L++ ASDI + Sbjct: 360 KGAKAHALNTDASFRFERGIDPTLTIDALKKAVLLLVEYANAEIASDIDDFYPKVIEDFP 419 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEE 462 I ++ +L G+++P E I L I E D + EV VP++R DV + DL+EE Sbjct: 420 ITLRYKKINQLLGMEIPKEKIKEIFTYLEIKTIKENDEEVEVLVPAYRVDVHREVDLIEE 479 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 ILR+YG D I +EP ++ N + + +V R L + E +N S I KE Sbjct: 480 ILRLYGYDNI-TEPEKVSFSIIPSNKTNPEKVEDFVARELNAFGFHEAMNNSLIKKEYEE 538 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--ND 579 LF E E+LNP+SAD++ MR SL+ GLL+ NV+R + ++E +Y N+ Sbjct: 539 LFHFPDGEFVEMLNPLSADLAVMRRSLITGLLENVIFNVNRKNKNIKLYEFGKIYTKLNN 598 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 T + K ++ + G G G W+ K++ + F DL VI LR Sbjct: 599 TYQESKQLSL-VVSGDIG----GENWT-KNQRKASFYDL-------KGVINQLFERLGLR 645 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-IPISQ 698 +S +P+ + GI + VLGY G + +L L+ + ++ D + + Sbjct: 646 IDSESPTEDANLQEGIRLITNGKVLGYAGIVNQKLLKKIDLNQAVYYAQLDWDVLLSMVN 705 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI---IKNVDRLIDDVTVFDVFQG 755 ++ K K++ +RDLA ++ Q L N +KN L+ DV +FDV++G Sbjct: 706 QQPLKYKEIPKFPG---SRRDLALLLPQTTTYQELYNAAFGLKN--ELLKDVHLFDVYEG 760 Query: 756 KSLGEG-KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L G KKS A+ + + T DD++ +M +++ K A LR Sbjct: 761 DKLPVGNKKSYALSFFFRDNQKTLSDDEVDRVMKKLIHLYEKSFGASLR 809 >gi|116668186|pdb|2IY5|B Chain B, Phenylalanyl-Trna Synthetase From Thermus Thermophilus Complexed With Trna And A Phenylalanyl-Adenylate Analog Length = 785 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 243/802 (30%), Positives = 397/802 (49%), Gaps = 38/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ SWLK ++ S E + + L +G E ++++ R P +V +E +P Sbjct: 1 MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIE-RVFPIPRGVVFARVLEAHPIPGT 59 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 + R+ + ++VV GA N R G+ A PG+ +P V R I+G+ S GM S Sbjct: 60 RLKRLVLDAGRTVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALS 119 Query: 121 EKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL + + ++E P DA P G LS+ + ++D+ +TPNR D +G+ G+A DL Sbjct: 120 PRELGVGEYGGGLLEFPEDALPPGTPLSEAWP-EEVVLDLEVTPNRPDALGLLGLARDLH 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G + L +E++PL ++D F + G+R +P WM++ L Sbjct: 179 ALGYAL---VEPEAALKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALF 235 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A G+R I+ +VD+TNYV L+R P H FD + + + VRRA GE++ LD E L P Sbjct: 236 AAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHP 295 Query: 300 DNVVIAS----DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +++VIA + +AG++GG + ++T + +EVA +DP++I ++ + G+ T+ Sbjct: 296 EDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTE 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + +RFERGVD G +P + +SL+ +L G ++ + P I F RL Sbjct: 356 ASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLL 415 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G P + + IL+RLG V GE + V+ PS R D+ + DLVEE+ RI G + I Sbjct: 416 GTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLVEEVARIEGYETIPLA 475 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 D R + + + ++ VL+ EV +SF+ E + F L +LN Sbjct: 476 LPAFFPAPDNRAVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLN 535 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFA-IFEVSHVYENDTPEGQKYMAAGIRKG 594 P++ + + +RT L PGL++ N+D + A +FEV V+ E ++ AG+ G Sbjct: 536 PLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFR----EREETHLAGLLFG 591 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRS 653 EG G W ++ER L +AL F L + R E+ A + HPG S Sbjct: 592 ----EGVGLPW---AKERLSGYFLLKGYLEAL-----FARLGLAFRVEAEAFPFLHPGVS 639 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G + E V G+ G HP I L P+ FE+ L P+ K H ++ Sbjct: 640 GRVLVEGEEV-GFLGALHPEIAQELELP-PVHLFELRL---PLPDKPLAFQDPSRHPAAF 694 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 RDLA +V P G + +++ ++ + +FD++QG L EG KS+A + + Sbjct: 695 ----RDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLRFR 750 Query: 773 PLKDTFRDDDIRILMDRIVENV 794 K T RD+++ + R+ E + Sbjct: 751 HPKRTLRDEEVEEAVSRVAEAL 772 >gi|257784856|ref|YP_003180073.1| phenylalanyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] gi|257473363|gb|ACV51482.1| phenylalanyl-tRNA synthetase, beta subunit [Atopobium parvulum DSM 20469] Length = 819 Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 252/844 (29%), Positives = 424/844 (50%), Gaps = 67/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + WLK +D + + G EVE V+ A L +V+S E +PD D Sbjct: 1 MRVSYEWLKTLVDLPQDPKDLEREFVRTGTEVEAVERVGANLDHVVTAQVVSKEPHPDSD 60 Query: 60 -CAILRIDTGKHQ--------EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + +D GK+ +Q+VCGA N G V A G+ +P + + K+R Sbjct: 61 HMYVTLVDVGKNNVDKDGNPVPLQIVCGAQNFNQGDHIVTAMIGAVLP-GDFKIKKSKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM CS +EL L DD + IM LP DAP+G L+DYL +SD ++D +TPNR DC+ Sbjct: 120 GVESYGMNCSSRELGLGDDQSGIMILPEDAPIGVPLTDYLGMSDVVLDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPL------SSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 + G+A+++ A + +I+ L S ++ ++ + D LC + V+ Sbjct: 180 MTGMAVEVSA-----MYDIDTHIELPSVTSESGQNASDQVDVTITDPDLCPRYTARVVRN 234 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-----LTVR 279 V+ +P W+ +R+ A G RSI+ +VD+TNYV G P H FD +++ + VR Sbjct: 235 VKIGPSPEWLARRVTACGGRSINNVVDVTNYVMYLTGQPLHAFDLGKLTKEDGKYHIVVR 294 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALW 338 A GE I+ LD ++ +L+ D VI +G+ ++AG++GG + +NT DVL+E A++ Sbjct: 295 AAKDGEHIVTLDGEDRELTSDMTVITDNGKTPIALAGVMGGMDSEITENTVDVLLESAVF 354 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 D +I+R+ +NL +++++ R+ER VD G V +L CG +++C Sbjct: 355 DNGHISRTSRNLDLMSEASIRYERLVDPNGCASVADIAAALFEECCG---AEVCPGIVDV 411 Query: 399 YKPRK----IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDV 453 Y K I V L+G+ +P E + L RLG V D V P+ R D+ Sbjct: 412 YPKVKEAVTIALRPERVCALAGVQIPEEFMVSRLTRLGCKVTPADDGNLSVVAPTNRPDL 471 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 + DL+EEI+R++G I++ LP + L+L+Q + R + R L S + E ++ Sbjct: 472 TREVDLIEEIVRLWGEGDIEAT-LPAAR-NHAGGLTLEQRQIRKIGRTLRSLGLNETKSY 529 Query: 514 SFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F S + G G +++++P+ AD S MR S++PGLL++ N+ +++ A+ Sbjct: 530 LFASPDDLSKLGMSEEGRGVPVKVISPLVADQSEMRRSIVPGLLRSIAYNLAHGVSNIAM 589 Query: 570 FEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +E+ V + P+ +Y+ + GR D + D FDAK Sbjct: 590 YELGRVLFGHKDKSQPDEPRYVCGVL---------VGRPADDTWNAKYLAYDFFDAKGIV 640 Query: 626 LSVIEPFVSLDSLRFESGAP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 ++E + +RF P W PGR+ I +E + G+ G HP L F + Sbjct: 641 EGLLEAL-RIPKVRFRVAEPEQYGWLQPGRAAEILAGSETI-GWVGNIHPLSLQNFDIEV 698 Query: 683 PICGFEVYLDS-IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV- 740 P+ FE+ + S + +SQK +V + + DLA +VD+ + A LV +K+ Sbjct: 699 PVIAFEISVASLLRLSQKDL----PIVEPPTYPGISIDLAIVVDESVTAEQLVQRLKSAG 754 Query: 741 DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L+ D+ +FDV++ +G+GKKS+A + + T +++ ++VE V++ T Sbjct: 755 GKLLCDIRLFDVYRDALRVGKGKKSMAFSLTYRADDRTLTSEEVEKTHAKLVEKVLRSTG 814 Query: 800 AVLR 803 +R Sbjct: 815 GEIR 818 >gi|282879896|ref|ZP_06288623.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella timonensis CRIS 5C-B1] gi|281306290|gb|EFA98323.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella timonensis CRIS 5C-B1] Length = 820 Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 248/841 (29%), Positives = 425/841 (50%), Gaps = 59/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ +++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNVSYKWLKEYVDFDLTPQEVADALTSCGLEVDALEEVQSIKGGLKGLYVGKVLTCEMHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D GK Q Q+VCGAPNV G + A G + E + + K+RG++ Sbjct: 61 NSDHLHITTVDLGKEQPSQIVCGAPNVAAGQKVIVADVGCVLYNGEESFTIKKSKLRGVD 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +I++ +T NRSD + Sbjct: 121 SYGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYHLESDWVIEIDITANRSDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A N+ P + +E +P++++ ++++ CK +A + Sbjct: 181 GVARDLYAWLKQNGYATNLHRPNCDAFQVDNEDLPIDVQ--IENTQACKRYACISLTDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L+ +GLR ++ +VDITNY+ + G P H FDA + + + VR G Sbjct: 239 VKDSPEWLQDKLRVIGLRPVNNIVDITNYIMMAYGQPMHCFDADMVEGNRIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K LD +E+ L ++ I + IAGI GGK +G ++T +V++E A + P I + Sbjct: 299 KFETLDGEEHTLGEHDLSICNAEHPMCIAGIFGGKGSGTYNSTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---R 402 S + G+ TD+ YRFERG+D G+I LK L L GG S +++ +P Sbjct: 359 SARRHGLSTDASYRFERGIDPNGVIYALKQAAILCQQLAGGKVS--MQIKDVYPEPIENA 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 K+ S V L G ++ + I+ L ++ E ++ E+S+P++R DV+ D+VE Sbjct: 417 KVSLSYSYVNGLIGKEIGHDTIKEIVTNLEMEILQETAEELELSIPTYRVDVQRPCDVVE 476 Query: 462 EILRIYGVD------QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 +ILRIYG + Q+KS L + ++K++L + L E++N S Sbjct: 477 DILRIYGYNNVEIPQQLKSSLTILGEEDEKQHLE------NLIGEQLLGSGFHEILNNSL 530 Query: 516 --ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ Q + + ++++NP+S+D+ MR +LL G L++ RNV+R A+ +FE Sbjct: 531 TKVAYYQDLNQYAEETTVKVMNPLSSDLGVMRQTLLFGGLESIARNVNRKNANLRLFEFG 590 Query: 574 HVYENDTPE---------GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 + Y D ++ G+ +EGS W+ E+ F+ KA Sbjct: 591 NCYHFDAARLDADNPINAYKQETHLGLWITGKRVEGS---WAHADEDS----SFFELKAY 643 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 +V V E + + G + +K + G P +L G+S Sbjct: 644 IENVFARLGVPAGLCISEKSDNNIFSEGLT--MKNRGGKPMVELGVVCPRLLKTAGVSAT 701 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDR 742 + +++ ++ + +K+ K LS V RDLA ++DQ IP + I + + Sbjct: 702 VYYADIHWSTVMKAIRKQKVEFK--ELSKFPAVSRDLALLLDQAIPFEKIEEIAFQTEKK 759 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ V +FDV++GK+L EGKKS A+ ++Q + T D I +M ++++N+ A L Sbjct: 760 LLKRVELFDVYEGKNLPEGKKSYAVNFILQDEQKTLNDKQIDAIMQKLIKNLTTNLGAEL 819 Query: 803 R 803 R Sbjct: 820 R 820 >gi|296876185|ref|ZP_06900239.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] gi|296432896|gb|EFH18689.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 15912] Length = 801 Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 249/827 (30%), Positives = 426/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK +D DV E++ + +++ G+EVE V + A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKQLVDVDVPSEELAEKMSTTGIEVEGVASPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ +++ + + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKDFSLTETDQAAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +N++ V++E A+++ +I ++ Sbjct: 296 LDGEERELETSDLVITVADKPVALAGVMGGQATEISENSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLTYADVEDVFRRLGFGLSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP T +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDK-----LPATLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFA 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T + Sbjct: 531 TAPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTVVVPVDFFYAKG----ILEALFARLGLEVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + V+G G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIKSLHPGRTALISLGDQ-VIGVLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 AALQPAAAFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|256827592|ref|YP_003151551.1| phenylalanyl-tRNA synthetase, beta subunit [Cryptobacterium curtum DSM 15641] gi|256583735|gb|ACU94869.1| phenylalanyl-tRNA synthetase, beta subunit [Cryptobacterium curtum DSM 15641] Length = 825 Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 255/847 (30%), Positives = 429/847 (50%), Gaps = 67/847 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +L WL ++ + ++ CD L G VE VD A S +V+ +P+ D Sbjct: 1 MKVSLKWLSTYVAVPDNTKEFCDRLDLTGTGVEGVDETGAAFSGVYTGQVVEKIPHPNSD 60 Query: 60 --------CAILRIDT-GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + +D G + +Q+VCGA N G A G+ +P ++ + K+R Sbjct: 61 HMFITQVNVGLRNVDADGNPEPLQIVCGAQNFYKGDKIPVALVGAKLP-GDITIKKSKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G S GM CS +EL L +D + LP + P+G L+ YL LSD I+D+ +TPNR DC+ Sbjct: 120 GQVSMGMNCSARELGLGEDVDGLYILPENTPLGLDLAQYLGLSDRILDLEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPL--SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + G+A ++ A + ++ L ++ ++ +D++SLC + ++ V+ Sbjct: 180 MEGMAREVGAMYRIPVTDVREGRTLKEGGQATADMVEVSIDEASLCPRYTARVIRNVKVG 239 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-----LTVRRACS 283 +P W+ +R+ A G R I+ +VD TNYV G P H FD ++++D + VR A Sbjct: 240 PSPQWLAERIAAAGARPINNVVDATNYVLFLLGQPLHAFDFNKVADASGKAHIRVRAAAE 299 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEK+ LD +E L+ D VIA+ R ++AG++GG D T D+L+E A + P + Sbjct: 300 GEKLTTLDGEERTLTSDMTVIATPDRAVALAGVMGGLDTEVVDTTCDILLEAATFSPAHT 359 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITY 399 +R+ +NLG+I++S R+ER VD + SLI L GGT D+ + + Sbjct: 360 SRTSRNLGLISESSMRYERRVDDVDIDKRADFAASLIAELTGGTVCRGLVDVWLEKT--- 416 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-------IGEYDKFEVSVPSWRQD 452 +P ++ F + G++V IE+ IL RLG +V GE V P++R D Sbjct: 417 EPVQLTFRTKRFCSMMGVEVSIEEVSDILRRLGCTVEAAETETSGEEGTLSVVAPTFRPD 476 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVV 511 +E + DL EE+LR++G++ + LP + KR+ S Q T + L++ + E + Sbjct: 477 LEREIDLYEEVLRLHGMENVPPT-LPGGRGRVGKRSWSEQVVAT--LHHTLSASGLNETM 533 Query: 512 NWSFISKE-------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 +SF S + +V+ G +E++NPI+AD S MR S++PGLL + N + + Sbjct: 534 TYSFASPDDLARLRMNTVIDG---EPVELINPINADQSVMRQSIVPGLLHSVAYNQNHGV 590 Query: 565 ADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 A+ ++E+ +V+ E Q+ AG+ GS G W+ + E ++ FD Sbjct: 591 ANIQLYEIGNVFAAHEGRKLPRQRVKLAGVLAGSLHETG----WNRHAVE----LNFFDG 642 Query: 622 KADALSVIEPFVSLDSLRFES---GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 K L I +++ +RF + A S+ GR+ + SA V+G+ GE HP F Sbjct: 643 KG-VLENIARELAIPKIRFRALDEQAASFLQTGRAAEM-LSAGTVIGWVGEIHPLAAQAF 700 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 PI FE+ +D++ S + +T +V PV D+AF+VD+ + L ++ Sbjct: 701 ETQAPIVAFELDVDALVKSARIERETYEV---PEFPPVSLDVAFVVDEDVTNERLEQCMR 757 Query: 739 NV-DRLIDDVTVFDVFQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 + +L+ ++ +FDV++ + +G GKKS+A + Q L T +++ R+V+ V Sbjct: 758 SAGGKLLSNIRLFDVYRDEERIGAGKKSMAYALEYQSLDHTLTSEEVEKAHSRLVKKVGN 817 Query: 797 KTNAVLR 803 T A +R Sbjct: 818 ATGAEVR 824 >gi|300777082|ref|ZP_07086940.1| phenylalanyl-tRNA synthetase beta subunit [Chryseobacterium gleum ATCC 35910] gi|300502592|gb|EFK33732.1| phenylalanyl-tRNA synthetase beta subunit [Chryseobacterium gleum ATCC 35910] Length = 800 Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 264/838 (31%), Positives = 427/838 (50%), Gaps = 72/838 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLKD + T++ E+I + LT IGLEVE +D E+ L + KVL+ E++P Sbjct: 1 MKISNNWLKDFVKTELKTERIGEFLTDIGLEVEGIDKFESVKGSLEGIVVGKVLTCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGI 112 + D +D G + + +VCGAPNV G A G+ I + N + KIRG Sbjct: 61 NADKLKKTTVDVGNGKVLNIVCGAPNVEAGQAVPVAVVGTKIYDKTGNFFEIKEAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIG 170 S GM+C+E EL LSDD IM L VG +DY EL+ D + ++ LTPNR+D + Sbjct: 121 VSQGMICAEDELGLSDDHGGIMVLDETKYEVGKNFADYFELTNDEVFEIGLTPNRTDAMS 180 Query: 171 VRGIALDLVAA-GLGKLK-EINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKG 224 G+A DL A +LK + N ++SE++ E K +++D+ LC + ++ Sbjct: 181 HYGVARDLHAYLSTNQLKSQFN---KVASEALNGEGTHDFKLEIEDAELCPRYIGAVIED 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS- 283 V+ +P+W++ RLKA+GL I+ +VDITNY+ G P H FDA +I+D Sbjct: 238 VKVAESPSWLKDRLKAIGLSPINNVVDITNYILHGYGQPLHAFDADKIADKKVKVGVVKP 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQS--IAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G K LD E L+ ++I DG+ IAG+ GG+ +G + T + +E A ++PI Sbjct: 298 GTKFTTLDGVERTLNGSEIMI-KDGKDNPMCIAGVFGGEKSGVSETTKTIFLESAYFNPI 356 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 + + K + TD+ +RFERGVD + H + +I + G + + P Sbjct: 357 AVRKGAKAHSLNTDASFRFERGVDPNLTRTAITHAIKMIQEIAEGK----LVGELLEEYP 412 Query: 402 RKI-----VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEE 455 +KI + S+++++ G + E IL+ L V+ E + FE+SVP++R DV Sbjct: 413 KKIEDNYVILRFSKIEQILGTKIHREKVKEILKALEIQVLNEIPNGFEISVPAYRADVTR 472 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 + D++EEILRIYG ++I + P ++ K + + Q R L S EV+N S Sbjct: 473 EIDVIEEILRIYGYNKIDA-PQKISFTPVKLSANDQDELENSWARTLQSLGFNEVMNNSL 531 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 S + +++LNP+S D++ MR SLL GLL+ T N++R D FE+ + Sbjct: 532 TSVKDET------DAVKLLNPLSGDLAFMRKSLLEGLLQNTVYNINRKNQDIKFFELGKI 585 Query: 576 Y-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSV 628 Y + D E +K +A + SGR ++ + V ++ KA + L+V Sbjct: 586 YHKKDKYEERKQLALLV---------SGRDVAENWLQPKSAVSFYNLKAYVKVLLERLAV 636 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 V+L RF S A + G++ L G+ P +L F + E Sbjct: 637 NYKEVALTDDRF-SDALVYEADGKA----------LVRIGKVAPALLKDFDIDQDCFYAE 685 Query: 689 VYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDD 746 + L+ +Q+ R+K + K + + ++RDLA ++D+ + L KN I Sbjct: 686 IELE---YAQELRSKNELKFKDIPKFNKIRRDLALLIDKTVNYQDLYQTAKKNKSPFIKS 742 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +FDV++GK+L EGKKS A+ + + T + +I +MD ++++ K+ NA LRS Sbjct: 743 INLFDVYEGKNLPEGKKSYAMSFELLNEEKTLEEKEITEVMDSLIKSFQKEFNAELRS 800 >gi|145219922|ref|YP_001130631.1| phenylalanyl-tRNA synthetase beta subunit [Prosthecochloris vibrioformis DSM 265] gi|145206086|gb|ABP37129.1| phenylalanyl-tRNA synthetase beta subunit [Chlorobium phaeovibrioides DSM 265] Length = 811 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 252/829 (30%), Positives = 427/829 (51%), Gaps = 53/829 (6%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNP 56 MK +++WLKD L + + + D LT +GLEVE+V E + P I ++L V +P Sbjct: 8 MKISVNWLKDFLPSFSPDIPSLVDRLTFLGLEVEEV--HETVLPDERVVIGRILEVAPHP 65 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 D D + +DTG + +Q+VCGAPNV+ +L A G+C+ + ++ KIRG Sbjct: 66 DADRLRLCMVDTGAAEPLQIVCGAPNVKPEMLVPVATAGACLAVEDGKPFVIKPSKIRGQ 125 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +S GM+C+ EL LS D + +MEL VG + YL+ +D ++++++TPNR D + Sbjct: 126 KSFGMICAADELGLSGDHSGVMELEEACVVGEPFARYLK-ADTVLEIAVTPNRPDVLSHL 184 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEI-----KFDLDDSSLCKGFAMCCVKGVRN 227 GIA +LV + +I+ P ++ P+E + ++ D + C +A ++GV+ Sbjct: 185 GIARELV------VSPSDIAMP---DAAPVEFSATGSRVEILDGAACSSYAAIVIEGVKV 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W+ RL+++GLR + +VDITNY+ G P H FD + + + VR GE Sbjct: 236 GPSPAWLSARLESIGLRPKNNIVDITNYMLHALGQPMHAFDLHTLEGERVVVRSDIEGE- 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 +AL+ Q + VI R +IAG++GG + + + D+L+EVA + I RS Sbjct: 295 FMALNQQLCRVEKGMPVICDAHRPVAIAGVMGGLDSAVTEESRDILLEVASFSSSPIRRS 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + GI +DS YRFERGVD +P + V++IL L GG ++ C + R+++F Sbjct: 355 ARLAGISSDSSYRFERGVDPSLTLPAARSAVAMILDLAGGRVAEACHKGEASPPLREVLF 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILR 465 + L G D+ +LER+GF V+ D+ ++VPS+R DV + DL+EE+ R Sbjct: 415 RPLKANALLGTDISEASMQAMLERIGFRVLSRTDEGMNIAVPSFRVDVIGEIDLIEEVAR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++G D I + P R S+ + +++ ++ + EV+ + +E++ LF Sbjct: 475 LHGYDNITASPRMAATYPIHR--SIPEFFPDFLRSIMVALNFREVLTNPLMKREEAELF- 531 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 R + LNPIS + +R SL+PG+LK N+ D +FEV+ ++ P+ ++ Sbjct: 532 -SDRVVAALNPISEGLEVLRPSLVPGMLKVMAHNIRHGNRDMRLFEVASSFQT-VPDDER 589 Query: 586 YMAAGIRKGSS------GIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +A + S + GS R W+ ++ +D +DA A ++E LD Sbjct: 590 ASSASLDAFSEKEGLVFALSGSRFPRSWNQPTDG----IDFYDALGAAQMLLEKLNLLDK 645 Query: 638 LR---FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + S P +G K + + +G + +L FG+ + F LD + Sbjct: 646 SAVNIYNENTVSIDLPLMAG--KKTGTVRVGLVQQLQREVLSRFGIEQDV--FVAVLD-V 700 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQ 754 + + T S V+RDL+FI+ + +LV++++ D LI +V+VFDVF+ Sbjct: 701 SVLEAGFTPVVAYEPPSKFPVVQRDLSFILPGGVSVQSLVDLVRESDGLIRNVSVFDVFE 760 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +S GEG++SVA+ + I T +D+ I ++ I + K AV+R Sbjct: 761 RQSGGEGERSVALGLDIADYGRTLQDERINDIVLAIGNSAESKLGAVIR 809 >gi|94990152|ref|YP_598252.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS10270] gi|94543660|gb|ABF33708.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS10270] Length = 806 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 242/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ + LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEAPADGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDGNSQTVVLEAAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETRFTVAVPRRRWDISISADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 594 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDIALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ G+KS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGATIQAGQKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|332975690|gb|EGK12575.1| phenylalanyl-tRNA synthetase beta subunit [Psychrobacter sp. 1501(2011)] Length = 803 Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 248/833 (29%), Positives = 417/833 (50%), Gaps = 58/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + WL++ ++ + + + D LT GLE++ ++ A S + +V+SVE +PD D Sbjct: 1 MKISEQWLREWVNPNNDTQALADQLTMAGLEIDDIEAVAADFSGVVVGEVISVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 + +++ +Q+VCGAPNVRVG+ A G+ +P + + K+RG+ES Sbjct: 61 KLRVTQVNINAEAPLQIVCGAPNVRVGMRAPVATIGANLPSEDGKGFKIKKSKLRGVESQ 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C E+ L D ++ELP DA +G + +Y L + I+D+S+TPNR DC VRGIA Sbjct: 121 GMLCGASEIDLPDVVDGLLELPEDATIGLDIREYFGLDNKILDISITPNRGDCFSVRGIA 180 Query: 176 LDL-VAAGLG--------KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 ++ V GL + E++ + ++ E++ C + V + Sbjct: 181 REIGVINGLATTAPEITVQQGEVDATQAVTVEAV-----------EACPRYLAQPVLNID 229 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 ++ P+WM++ L G R + LVD+TNYV L+ G P H FDA ++ + VR A GE Sbjct: 230 RSIETPDWMQKALLQSGQRLHNFLVDVTNYVLLELGQPLHAFDADKLVGNIQVRIAKEGE 289 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K+ L+ Q L D +VIA D I ++AGI+GG + D+TT++++E A +D + IA Sbjct: 290 KVELLNEQTITLKGDELVIADDEGIVALAGIMGGMRSSVTDSTTNIVLESAFFDQLAIAG 349 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-- 403 + G+ TD+ RFERGVD + + L V+LI + G A I + N+ P + Sbjct: 350 RARRFGLHTDASQRFERGVDFELPMTALNRAVNLISGIANGKAGHITMVENVDKLPTRAA 409 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV----PSWRQDVEEKADL 459 + +V + GI++ + + IL +L V + + + PS R D+E K DL Sbjct: 410 VELPLHKVAEVIGIEIEKQRIIDILTQLEIKVEEQQQDGVIVLSCLPPSHRFDIEIKEDL 469 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK- 518 +EEI RIYG D I S LP V+ + + + T +K + ME +++SF + Sbjct: 470 IEEIARIYGYDNIPST-LPNLGVDMRYDDT--ADLTHRLKLTMVDAGYMEAISFSFSDEK 526 Query: 519 -EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E+++ L + NPISAD++ MR +LL L+ N++R FE Sbjct: 527 IEKALDDAKLGNLLALANPISADLAVMRRTLLSSLIPCVQYNLNRQQPRVRFFET----- 581 Query: 578 NDTPEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 G ++ A I + S I +G + +++ R +D FD K D ++ + Sbjct: 582 -----GLSFVGATIDELVQTPSLAIVATGDVNPEQAHSN-RPMDFFDLKHDVEQLLPATL 635 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + ++ ++ HPG+S + V+G+ G+ HP++ L + L Sbjct: 636 EESRISYQRSEMAFLHPGQSAELLIDGN-VIGWLGQLHPSVAQKLDLP---TTWVAQLAL 691 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDV 752 PI Q+ R T+ + S V+RD+A +V+ +P L I+N L+ +FDV Sbjct: 692 APILQEARA-TQTISSPSKFPQVRRDIALLVNAEVPRQQLSQTIRNAGGELLQQHWLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +QG+ +G +SVA ++ Q + T D+ + M R++ + + A LR S Sbjct: 751 YQGEHTPKGMRSVAFALIWQDIAQTLSDEVVNESMQRVITALESEHGAQLRDS 803 >gi|46199897|ref|YP_005564.1| phenylalanyl-tRNA synthetase beta chain [Thermus thermophilus HB27] gi|66773920|sp|Q72HA0|SYFB_THET2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|46197524|gb|AAS81937.1| phenylalanyl-tRNA synthetase beta chain [Thermus thermophilus HB27] Length = 785 Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 242/802 (30%), Positives = 396/802 (49%), Gaps = 38/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ SWLK ++ S E + + L +G E ++++ R P +V +E +P Sbjct: 1 MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIE-RVFPIPRGVVFARVLEAHPIPGT 59 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 + R+ Q ++VV GA N R G+ A PG+ +P V R I+G+ S GM S Sbjct: 60 RLKRLVLDAGQAVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMALS 119 Query: 121 EKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +EL + + ++E P DA P G L++ + ++D+ +TPNR D +G+ G+A DL Sbjct: 120 PRELGVGEYGGGLLEFPEDALPPGTPLAEAWP-EEVVLDLEVTPNRPDALGLLGLARDLH 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G + L +E++PL ++D F + G+R +P WM++ L Sbjct: 179 ALGYAL---VEPEAALKAEALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALF 235 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A G+R I+ +VD+TNYV L+R P H FD I + + VRRA GE++ LD E L P Sbjct: 236 AAGMRPINNVVDVTNYVMLERAQPMHAFDLRFIGEGILVRRARPGERLRTLDGVERTLHP 295 Query: 300 DNVVIAS----DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +++VIA + +AG++GG + ++T + +EVA +DP++I ++ + G+ T+ Sbjct: 296 EDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTE 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + +RFERGVD G +P + +SL+ +L G ++ + P I F RL Sbjct: 356 ASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLL 415 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G P + + IL+RLG V G+ + V+ PS R D+ + DLVEE+ RI G + I Sbjct: 416 GTSYPEAEQIAILKRLGCRVEGQGPAYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLA 475 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 D R + + R ++ +L+ EV +SF+ E + F L +LN Sbjct: 476 LPAFFPAPDNRGVEAPYRKERRLRELLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLN 535 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFA-IFEVSHVYENDTPEGQKYMAAGIRKG 594 P++ + + +RT L PGL++ N+D + A +FEV V+ E ++ AG+ G Sbjct: 536 PLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFR----EREETHLAGLLFG 591 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRS 653 EG G W ++ER L +AL F L + R E+ + HPG S Sbjct: 592 ----EGVGLPW---AKERLSGYFLLKGYLEAL-----FARLGLAFRVEAQVFPFLHPGVS 639 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 G + E V G+ G HP I L P+ FE+ L P+ K H ++ Sbjct: 640 GRVLVEGEEV-GFLGALHPEIAQELELP-PVHLFELRL---PLPDKPLAFQDPSRHPAAF 694 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 RDLA +V P G + +++ ++ + +FD++QG L EG KS+A + + Sbjct: 695 ----RDLAVVVPAPTPYGEVEALVREAAGPYLESLVLFDLYQGPPLPEGHKSLAFHLRFR 750 Query: 773 PLKDTFRDDDIRILMDRIVENV 794 K T RD+++ + R+ E + Sbjct: 751 HPKRTLRDEEVEEAVSRVAEAL 772 >gi|25010943|ref|NP_735338.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus agalactiae NEM316] gi|77410707|ref|ZP_00787066.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] gi|30316223|sp|Q8E5U1|SYFB_STRA3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|23095322|emb|CAD46532.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus agalactiae NEM316] gi|77163243|gb|EAO74195.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae CJB111] Length = 801 Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 239/825 (28%), Positives = 429/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVF 406 L + ++S RFE+G++ + + +++ L GG + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + E++ P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ Sbjct: 532 QATNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFES 642 + + + + +G + + + + VD F AK ++E + LD Sbjct: 591 DLPTEVETFTFAL--TGLVEEKDFQTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQ 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPGR+ I + + G+ G+ HP + + E Y+ I +S + Sbjct: 645 KGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQYDIP------ETYVAEINLSTIESQ 697 Query: 703 KTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSL 758 + ++ ++ V RD+A ++ + + +V+ I+ V RL + +FDV+ G ++ Sbjct: 698 MNQALIFEDITKYPSVSRDIALLLAESVSHHDIVSAIETSGVKRLT-AIKLFDVYAGNNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ M++I +++V+K NA +R Sbjct: 757 AEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 801 >gi|83815262|ref|YP_446898.1| phenylalanyl-tRNA synthetase, beta subunit [Salinibacter ruber DSM 13855] gi|93140709|sp|Q2RYT3|SYFB_SALRD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83756656|gb|ABC44769.1| phenylalanyl-tRNA synthetase, beta subunit [Salinibacter ruber DSM 13855] Length = 830 Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 253/842 (30%), Positives = 395/842 (46%), Gaps = 49/842 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL +++D D S +++ + LT GLEVE V ++L + KV +V +P+ D Sbjct: 1 MDVSYNWLNEYVDHDWSPKELAERLTMAGLEVETVRPLGQSLDGVVVGKVTAVREHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-------PE--NNMIVNVRKI 109 +L +D G Q+ CGAPNV G A G+ + PE + V R++ Sbjct: 61 RLVLCDVDLGDGAPSQIACGAPNVAAGQKVPVATVGTTLSRPDPDDPEALQELTVEAREL 120 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-----SDPIIDVSLTPN 164 RG S GM+C+E EL LSDD A IM L D PVG +YL+ +D ++D+ LTPN Sbjct: 121 RGEASNGMICAEDELGLSDDHAGIMVLDDDTPVGTPFPEYLDAHGMPSTDAVLDIELTPN 180 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R D G+A D+ A +L+ + P + EI DL D + C + V+G Sbjct: 181 RPDAASHLGVARDVSALADSELRTPTVDTPSPGGPVAEEITVDLRDEAGCPRYVALLVRG 240 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACS 283 V +P W+R+RL A+GL+ + +VD+TN+V + G P H FD I+ D + VRR Sbjct: 241 VDVTESPLWLRRRLTAIGLQPRNHVVDVTNFVLHECGQPLHAFDLDAIADDTIVVRRTDD 300 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 LD +E DL D ++I ++AG++GG ++ +TTDVL+E A +DP I Sbjct: 301 ETPFTTLDGEERDLPEDTLLICDAEAPVAVAGVMGGANSEVSADTTDVLIESAYFDPSTI 360 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 R+ K L + TDS YRFERGVD G + LI L GGT + + + K Sbjct: 361 RRTAKALDLQTDSSYRFERGVDRDGQVWAAARAAELIAKLGGGTVVPGLVDEHPSPPAEK 420 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + + + + ++ G +VP ++ R+L +GF V D +VP+WR DV + DL+EE Sbjct: 421 TIALRPDRLTQVLGTEVPTDEGTRLLGAIGFDVEAGEDALHCTVPTWRPDVSIEEDLIEE 480 Query: 463 ILRIYGVDQIKSE---PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 + R++G DQI P+P E +L+ R +++L E+ S + + Sbjct: 481 VARLHGYDQIPEPERVPVPSRTPEQPPEETLE----RQARQLLKGLGYREIYTNSMLRTD 536 Query: 520 QSVLF----GGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ F G R +E NPIS +M+ +R LLPG L+ N + +FE Sbjct: 537 RAERFNVPPAGSDRAPVVETKNPISEEMAALRPRLLPGALEVMQHNRNHGQEALRVFEFG 596 Query: 574 HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 V+ + + + SG + R D+FD K ++ Sbjct: 597 RVFRRAAEPDDPIVPGYSEHPALLVALSGPHAPTGWDTEPRSADIFDLKGTVETL----- 651 Query: 634 SLDSLRF--------ESGAPSWYHPGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLSNPI 684 LD LR ++GA P I +A + LG ++ F L P+ Sbjct: 652 -LDDLRVPALQVRPRDAGATDEAPPVTQHHIDVAAGDTPLGTVARVRDDVAADFDLDTPV 710 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-L 743 E + ++ + + + +S V RDLA +V P G L I+ L Sbjct: 711 FVAEFHWAAL-VDSATAEQHRDYEPVSRFPVVDRDLAVLVPADQPVGPLQRAIREAGAPL 769 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V VFD + G+ + E KSVA + + T D+++ +D IVE + + A LR Sbjct: 770 LRRVDVFDTYAGEGIDEDTKSVAFTLRFGADR-TLTDEEVDARLDAIVERLAENHGARLR 828 Query: 804 SS 805 Sbjct: 829 QQ 830 >gi|22537034|ref|NP_687885.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus agalactiae 2603V/R] gi|30316221|sp|Q8E064|SYFB_STRA5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|22533891|gb|AAM99757.1|AE014231_15 phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 2603V/R] Length = 801 Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 239/825 (28%), Positives = 429/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVF 406 L + ++S RFE+G++ + + +++ L GG + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + E++ P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ Sbjct: 532 QATNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFES 642 + + + + +G + + + + VD F AK ++E + LD Sbjct: 591 DLPTEVETFTFAL--TGLVEEKDFQTKSKPVDFFYAKG----IVEALFIKLKLDVTFVAQ 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPGR+ I + + G+ G+ HP + + E Y+ I +S + Sbjct: 645 KGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQYDIP------ETYVAEINLSTIESQ 697 Query: 703 KTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSL 758 + ++ ++ V RD+A ++ + + +V+ I+ V RL + +FDV+ G ++ Sbjct: 698 MNQALIFEDITKYPSVSRDIALLLAESVSHHDIVSAIETSGVKRLT-AIKLFDVYAGNNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ M++I +++V+K NA +R Sbjct: 757 AEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 801 >gi|28896259|ref|NP_802609.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes SSI-1] gi|30316238|sp|Q8K820|SYFB_STRP3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28811510|dbj|BAC64442.1| putative phenylalanyl-tRNA synthetase (beta subunit) [Streptococcus pyogenes SSI-1] Length = 801 Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 243/831 (29%), Positives = 426/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPDEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPEKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVTRAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ +L+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRELTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A ++ +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLSTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI +LGF + G+ +F V+VP R D+ ADLVEEI RI Sbjct: 414 NLDYVNVRLGTELTFADIQRIFNQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E+++ Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFTI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLANMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 692 AALEAALPSDQTFAEITKFPAMTRDIALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 751 YEGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 801 >gi|332202462|gb|EGJ16531.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41317] Length = 801 Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 246/822 (29%), Positives = 428/822 (52%), Gaps = 40/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +I+ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQINVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQDTEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E+ L +I + + T Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQPAT- 702 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEG 761 +V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG G Sbjct: 703 --PLVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLGLG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 760 MKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|311105460|ref|YP_003978313.1| phenylalanyl-tRNA synthetase subunit beta [Achromobacter xylosoxidans A8] gi|310760149|gb|ADP15598.1| phenylalanyl-tRNA synthetase, beta subunit [Achromobacter xylosoxidans A8] Length = 805 Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 257/825 (31%), Positives = 431/825 (52%), Gaps = 41/825 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 M+F SWL+ ++ ++ +++ LT GLEVE V A S + ++ + +PD D Sbjct: 1 MQFPESWLRTLVNPAIATDELAHRLTMAGLEVEDTVPAAPAFSGVVVGHIVEIAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGAPN GL A G+ +P M + V K+RG++S+GM+ Sbjct: 61 KLRVCKVDDGSGELLQIVCGAPNAAAGLTVPLARVGAELP-GGMKIGVAKMRGVQSSGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS D A ++ELP G + + L+L D + + +TPNR+DC+ + G+A ++ Sbjct: 120 CSARELGLSQDHAGLLELPAGMTPGQSIREVLDLDDTLFTLKMTPNRADCLSILGVAREV 179 Query: 179 VAAGLGKLK-EINISCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMR 235 A L ++ P++ E +P+++ + LC F ++GV A P WM+ Sbjct: 180 AALTGAPLSVPTAVAVPVTLDERLPVKV----EAPDLCGRFGGRVIRGVNARAATPEWMK 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 RL+ G RS+SALVDI+NYV L+ G PSHVFD +I L+VR A GE + L+ Q Sbjct: 236 TRLERAGQRSVSALVDISNYVMLELGRPSHVFDLDKIRGDLSVRWAREGETLELLNGQTV 295 Query: 296 DL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L S VV+A D +++S+AGI+GG+ +T ++ +E A W P ++A + + Sbjct: 296 TLDSTVGVVVAGD-QVESLAGIMGGEATAVTLDTRNIYLEAAFWWPQSLAGRARRYKFSS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKR 413 ++ +R ERGVD + ++ I LI+ +CGG A + + + R+ V M R Sbjct: 355 EASHRGERGVDFATIPEHIEFITRLIVDICGGEAGPLD-DQIVNLPKREPVRMRLPRCHR 413 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + G+ V + +I LG E D F V+ PS+R D+E + DL+EE+ RIYG + I Sbjct: 414 VLGVPVTQAEVAKIFGSLGLDFRIEGDDFIVTPPSYRFDLELEEDLIEEVARIYGFENIP 473 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 EP P+ + + +++ ++R+ A++ EVVN+SF+ E + G + + + Sbjct: 474 VEP-PMARAKMFSQPEIRRG-AHALRRLAAAQDYQEVVNYSFVEAEWERDYAGNETPVRL 531 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP-EGQKYMAAGIR 592 +NPI++ +S MR+SL+ L+ N +R +FE+ V+ D + AG+R Sbjct: 532 VNPIASHLSVMRSSLIASLVANIRHNANRKQTRVRLFELGRVFTRDASVQDGPLEVAGVR 591 Query: 593 KGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + ++ +G W EE+ R VD +D K D ++ S LRFE+ Sbjct: 592 Q---PMKLAGAAWGPAVEEQWGVATRQVDFYDVKMDVEALFGARGS--RLRFEAATHPAL 646 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR I+ + V G+ GE HP L++ FE LD+ +S+ + + ++ Sbjct: 647 HPGRGARIELDGKHV-GWVGELHPRWAQQADLAHAPVVFE--LDAAALSEGELPQVRE-- 701 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKSLGE-- 760 LS V RDLA VD + A ++++ + + ++ D +FDV++ KS G Sbjct: 702 -LSRQPVVVRDLALWVDADVSAQSMLDTVFATVKADPQLAVVQDARLFDVWREKSQGSEP 760 Query: 761 -GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KS+A + +Q + T + + + RI E +V A R+ Sbjct: 761 VTEKSLAFRFWLQDTEVTLDEARVADCLARIKEALVAAHGARQRA 805 >gi|71903233|ref|YP_280036.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS6180] gi|91208143|sp|Q48UC5|SYFB_STRPM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71802328|gb|AAX71681.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes MGAS6180] Length = 806 Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 425/831 (51%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ +EVE ++ + LS + VLS E P+ Sbjct: 6 MLVSYKWLKELVDIDVTPAALAEKMSATSIEVEGIEVPADGLSKLVVGHVLSCEDVPETH 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 66 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 124 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 125 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 184 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D+ L +A V+ V+ Sbjct: 185 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVK 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 239 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ DL+ +++VI + ++AG++GG+ D N+ V++EVA++D +I ++ Sbjct: 299 VTLDGEKRDLTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEVAVFDGKSIRKTS 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 359 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLPTEPVEVST 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D RI ++LGF + G+ F V+VP R DV ADLVEEI RI Sbjct: 419 SLDYVNVRLGTELTFADIQRIFDQLGFGLTGDETSFTVAVPRRRWDVSIPADLVEEIARI 478 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 479 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 533 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 534 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 593 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 594 KEDLPNELNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLK 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 644 VQYVPTKDLASMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 696 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDV 752 + + + ++ + RD+A ++D+ + +V I++ V RL + +FDV Sbjct: 697 AALEAALPSDQTFAEITKFPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 756 YEGVTIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 806 >gi|76786957|ref|YP_329616.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus agalactiae A909] gi|91208142|sp|Q3K1I7|SYFB_STRA1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|76562014|gb|ABA44598.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae A909] Length = 801 Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 239/825 (28%), Positives = 429/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTY 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVF 406 L + ++S RFE+G++ + + +++ L GG + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + E++ P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ Sbjct: 532 QATNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFES 642 + + + + +G + + + + VD F AK ++E + LD Sbjct: 591 DLPTEVETFTFAL--TGLVEEKDFQTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQ 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPGR+ I + + G+ G+ HP + + E Y+ I +S + Sbjct: 645 KGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQYDIP------ETYVAEINLSTIESQ 697 Query: 703 KTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSL 758 + ++ ++ V RD+A ++ + + +V+ I+ V RL + +FDV+ G ++ Sbjct: 698 MNQALIFEDITKYPSVSRDIALLLAESVSHHDIVSAIETSGVKRLT-AIKLFDVYAGNNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ M++I +++V+K NA +R Sbjct: 757 AEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 801 >gi|330685102|gb|EGG96768.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus epidermidis VCU121] Length = 794 Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 418/824 (50%), Gaps = 66/824 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D + ++ + + +T G+EV+ VD + + + V+S +PD D Sbjct: 1 MLISNEWLKDYVDVEQDVQDLAERITRTGIEVDDLVDLTKDIKNLVVGHVISKASHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEETPVQIVCGAPNVDEGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G D L L+D I++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNVVPKAFENGIFVFPEKITPGTNALDALYLNDQIMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + + + S E++ + +S ++ VK V +P Sbjct: 180 GTAYEVAALYDTQMTKPETNSNEEANSAMEELQVTVKNSDKVPYYSARIVKNVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S+ + VR+A EK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVLLEYGQPLHMFDQDQIGSNHIEVRQAHQDEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +QE L ++VI + ++ G++GG + DNTT+V+VE A++D +I + + L Sbjct: 300 DQERSLLESDIVITNGQSPIALGGVMGGDFSEVSDNTTNVVVEGAIFDSASIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ + G +A+ ++ I + Sbjct: 360 LRSEASSRFEKGIATEFVNEAVDRACYLLETYASGRVLKDRVAQGDLGSFITPIQITTDK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G ++ E I E+LGF + D+ V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFNLSTEAIKNIFEQLGFETESKQDELTVYVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + L+ +Q +TR VK + + + + +S +SK + F R Sbjct: 480 EIPS-TLPVFEDVTNGALTDRQHKTRTVKETIEGAGLNQAITYSLVSKSHAKDFALQDRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L++A NV R D ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIEAAAYNVARKNQDVKLYEIGRVFFGNAEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E+ VD + AK VIE +L FE A Sbjct: 599 YL-SGIMTGDYVV----NQWQGKKEK----VDFYLAKG----VIERVAQKLNLNFEYRAT 645 Query: 646 --SWYHPGRSGIIKTSAEIVLGYFGEFHPNI-------------LDFFGLSNPICGFEVY 690 + HPGR+ ++ + + + G+ GE HP + L++ + N G Y Sbjct: 646 EINGLHPGRTALVSLNGKDI-GFIGELHPTVAADNDLKRTYVFELNYEEMMNVSVG---Y 701 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVT 748 ++ PI + +P V RD+A V+ +PA L+N I +N ++ D Sbjct: 702 INYQPIPK---------------YPGVSRDIALEVEHDVPASELLNTIHQNGADILQDTL 746 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 VFDV++G+ L EGKKSVAI++ ++T D+ + + D+I+E Sbjct: 747 VFDVYEGEHLEEGKKSVAIRLYYLNTENTLTDERVTKVHDQIIE 790 >gi|327405268|ref|YP_004346106.1| phenylalanyl-tRNA synthetase subunit beta [Fluviicola taffensis DSM 16823] gi|327320776|gb|AEA45268.1| phenylalanyl-tRNA synthetase beta subunit [Fluviicola taffensis DSM 16823] Length = 810 Score = 340 bits (873), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 260/843 (30%), Positives = 424/843 (50%), Gaps = 73/843 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WL + L S E++ LT GLEVE + E+ L + +V+ E++P Sbjct: 1 MKISSAWLHEFLPLQKSPEELDQLLTDTGLEVEGFETIESVKGGLQGVVVAEVIECEQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI---PENNMIVNVRKIRGI 112 + D + +++ G + +QVVCGAPNV VG + A G+ + P+ + + V KIR + Sbjct: 61 NADRLKVTKVNNGT-EILQVVCGAPNVAVGQKVILAQVGATLYPKPDEPLKMKVSKIRDV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L I+ L A VG ++YLEL SD I++ LTPNR+D +G Sbjct: 120 ESHGMLCAEDELGLGTSHDGILVLDPAAKVGMPAAEYLELESDVQIEIGLTPNRADAMGH 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVR 226 G+A D++A L + N L P++ + ++++ C + ++ V Sbjct: 180 VGVARDVLAY-LACHEGSNAKLQLKETKKPVKEADLVVSVSVENTERCPRYLGITLRDVE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P W++ +L+AVGL I+ +VD+TNYV + G P H FDA ++ + VR A SGEK Sbjct: 239 VKPSPAWLQNKLRAVGLSPINNVVDVTNYVMRELGTPLHAFDAKVVAGKVIVRTAKSGEK 298 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD +L +++VIA+ IAG+ GG H+G D+TTDV +E A + P+++ ++ Sbjct: 299 ITTLDGVVRELHEEDLVIANGSEAMCIAGVFGGNHSGISDSTTDVFLEAAYFQPVSVRKT 358 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIV 405 K G+ TD+ +RFERGVD+ + L+ V LI + GG ++ A + R + Sbjct: 359 AKRHGLSTDASFRFERGVDVDLVPYALERAVQLIQEVAGGKVGMEVVDAYPNPIQKRSVT 418 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEIL 464 K+L G ++ + ILE L F V+ + ++ VP++R DV+ + D++EEIL Sbjct: 419 LRYERCKQLLGHEIEPKIIATILEFLDFEVVKSSSEGLDLLVPNYRIDVDREIDVIEEIL 478 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR-------VLASRAMMEVVNWSFIS 517 RIYG + I PLP +K N SL + ++R VLA E++N S S Sbjct: 479 RIYGFNLI---PLP-----EKLNTSLVVTSKPDLERLGSNFAEVLAGMGFNEMMNNSLTS 530 Query: 518 KEQSVLFGGGQ----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + + GG Q + + +LNP+S D++ MR SLL ++ N +R D +FE Sbjct: 531 PQYAEKLGGNQFPVSKAVSMLNPLSQDLAVMRQSLLFQAMETVAHNQNRQNPDLRLFEFG 590 Query: 574 HVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV------DLFDAKADA 625 Y END K + I G+ E WS K E+ F +LF+ Sbjct: 591 KTYSFENDIYGENKRLLLLI-TGNKQEES----WSQKQEKTTLFTLKGIVGNLFERLG-- 643 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI- 684 + + +SL + Y + I+K V+G G + + FG+ + Sbjct: 644 ---LHSLLQEESLSEQEVLADGY---QLRILKN----VVGTVGWANQKVKKHFGVKQDVF 693 Query: 685 ---CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 ++ LDS+ + + + + K V+RD + ++D + + I K D Sbjct: 694 VADLDWDAILDSLKLVKVQYKELPKTFE------VRRDFSLLLDSKVRFSQIEQIAKKAD 747 Query: 742 -RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 +++ V +FDV++GK+L EGKKS A+ Q + T +D + +M+ I + K+ A Sbjct: 748 KKILQKVGLFDVYEGKNLPEGKKSYAVSFTFQDAEQTLKDSQVDGVMNTIRTELEKQLGA 807 Query: 801 VLR 803 LR Sbjct: 808 ELR 810 >gi|322411484|gb|EFY02392.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 801 Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 239/830 (28%), Positives = 423/830 (50%), Gaps = 56/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ + LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPADGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I D L +A VK V+ Sbjct: 180 VAHE-VAAIYGKSISFPEKNLQESDKATSEAIEVAIA---SDKVLT--YASRVVKNVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE I Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESI 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ +L+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRELTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGHVQAGQLATEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ +D + ++LGF + G+ F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFKDIQTVFDQLGFGLTGDETSFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R V+ + + E+++++ + E++V Sbjct: 474 YGYDK-----LPTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAVE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 529 FAVAPSHLTELMWPMSVERSALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEANP 588 Query: 579 --DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D P + A I G + + + + VD + AK L + ++L Sbjct: 589 KEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQVVDFYHAKG-ILDTLFANLNLK 638 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + + Sbjct: 639 VQYVPTKDLASMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDM 691 Query: 697 S--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 + + + ++ + RD+A ++D+ + +V I++ + + + +FDV+ Sbjct: 692 AALEAALPSNQTFAEITKFPAMTRDIALLLDREVSHQAIVTAIESAGIKRLTKIKLFDVY 751 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G ++ GKKS+A + Q D D+++ M+++ + + ++ A +R Sbjct: 752 EGATIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKMTKALTEQVGAEVR 801 >gi|160900043|ref|YP_001565625.1| phenylalanyl-tRNA synthetase subunit beta [Delftia acidovorans SPH-1] gi|160365627|gb|ABX37240.1| phenylalanyl-tRNA synthetase, beta subunit [Delftia acidovorans SPH-1] Length = 815 Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 245/843 (29%), Positives = 419/843 (49%), Gaps = 67/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE+++ PFT + ++ + E++P+ Sbjct: 1 MQFPESWLREFCNPPLTTQELADTLTMAGLEVEELE--PVAPPFTKIVVGEIKAAEQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G + + +VCGAPN RVG+ +G PPG ++ + K+R Sbjct: 59 ADRLRVCQVDVGGPELLTIVCGAPNARVGIRVPCATVGAELPPGE--DGKPFLIKIGKLR 116 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM+CS +EL LS+D +MELP+DAP+G + +YL L D ++ + LTPN + C+ Sbjct: 117 GVESFGMLCSARELKLSEDHGGLMELPLDAPLGQNIREYLNLDDTLLTLKLTPNLAHCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 V G+A ++ A LK + + L +K + D LC F+ V+ V Sbjct: 177 VYGVAREVAALTGAPLKPQSFTPAAVGVQDRLAVKIEAPD--LCGRFSGRVVRNVNTQAK 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM RL G RS++ LVDI+NYV + G PSH+FD +I L VR GE++ Sbjct: 235 TPQWMVDRLARCGQRSVAPLVDISNYVMFELGRPSHIFDLDKIHGGLQVRWGKEGEQLKL 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ + VIA + ++S+AGI+GG D+T + +E A W P +IA + Sbjct: 295 LNGNTVTVDGQVGVIADEREVESLAGIMGGDATAVSDDTRHIYIEAAFWWPKSIAGRSRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA----RNITYKPRKIV 405 TD+ +RFERGVD + + ++ I L+L +C GT +C + +P+ + Sbjct: 355 YNFSTDAGHRFERGVDPELTVEHIERITELVLQIC-GTPETVCGPIDDQQANMPQPKPVT 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + ++ G+ + + L LG V V+ PS+R D+ + DL+EE+ R Sbjct: 414 LRVARAAKVIGMPLTQQQCHDALAGLGLPVEQGDGVLTVTPPSFRFDINIEEDLIEEVAR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 + G + + + PL + K L + R+++ V+R LA E +N+SF+ Sbjct: 474 MVGYENLPTTK-PLAPIAPK--LRAENRRSQFAVRRALADLGYQETINFSFVEAAWEKDL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 G +++LNPI++ +S MR+SL+ L++ N DR +FE+ V+ D Sbjct: 531 AGNANPIQLLNPIASQLSVMRSSLIGSLMQVLKFNADRKAERVRVFELGRVFLKDDSVVD 590 Query: 580 ---TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 T +G Q AG+ G+ G W ++E + VD +D K D +++ P Sbjct: 591 SDTTVKGFYQPMRVAGLAWGA----GEQLQWG-RAEAK---VDFYDVKGDVEALLAPRKP 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + FE HPGR + + + G+ GE HP + L+ FE+ LD++ Sbjct: 643 V----FEPAEHPAMHPGRCARVLLDGQSI-GFIGELHPQWRQQWDLAQAPVLFELELDAV 697 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--LIDDVTVFDV 752 + K ++ V+RD+A +V++ L+ ++ L+ V +FDV Sbjct: 698 LAREVPVFKP-----VAKHQAVERDIAVVVNEKATHAQLMQAVEAAQTGGLLRSVVLFDV 752 Query: 753 FQGKSLGEG-----------KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 F+ K+L G +KS+A+++ + + D I + ++E + ++ A Sbjct: 753 FRPKALKAGETAAPGALAQDEKSLAVRLTLGNDDSSLTDVQIEKAVQAVLEQLQQRLGAR 812 Query: 802 LRS 804 LR+ Sbjct: 813 LRA 815 >gi|307325428|ref|ZP_07604630.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces violaceusniger Tu 4113] gi|306888897|gb|EFN19881.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces violaceusniger Tu 4113] Length = 841 Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 258/859 (30%), Positives = 416/859 (48%), Gaps = 72/859 (8%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPAGETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGQVLAIEELE 60 Query: 54 --RNPDLDCAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + + G + +VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRYCQVDVGQANGTGEPQNIVCGASNFAVGDKVVVVLPGAELP-GGFAISARKTY 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G S GM+CS EL +SDD I+ LP + VG + LEL D ++D+++TP+R C+ Sbjct: 120 GKTSEGMICSASELGMSDDHDGIIVLPPEYEVGTDAIELLELVDEVLDIAVTPDRGYCLS 179 Query: 171 VRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +RG+A + A L++ I++ P +S P+++ D C F V G+ Sbjct: 180 MRGVARETATAYELPLRDPALIDVPAP-NSHGYPVQVT----DPIGCDRFTARTVTGLDP 234 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P W+ +RL+ G+R +S VDITNYV L+ G P H +D SRI+ + VRRA GEK Sbjct: 235 EAHSPIWLERRLQKAGMRPVSLAVDITNYVMLEIGQPLHAYDRSRINGAIGVRRAEPGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKH-----------AGCDDNTTDVLVEV 335 + LD + L +++VI + +AG++GG + G TT+V++E Sbjct: 295 LTTLDGSQRVLDAEDLVITDESGPIGLAGVMGGANTEIADATADAETGQAAGTTEVVIEA 354 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A + P+++AR+ + + +++ RFERGVD + + V L++ L GGTA ++ + Sbjct: 355 AHFAPVSVARTARRHKLSSEASRRFERGVDPEATSAAAQRTVDLLVLLAGGTA-EVGVTE 413 Query: 396 NIT-YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 I P I +++G+ E +R L+++G V G D ++VPSWR D+ Sbjct: 414 IIAPSAPHTITLPADHPDKVAGVSYGRETVVRRLQQIGCDVYG-ADDLTLTVPSWRPDLT 472 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL EE++R+ G + + P L + R L+ +Q R V R LA +E +N+ Sbjct: 473 DPNDLAEEVIRLEGYENL---PSTLPRPPAGRGLTERQRLHRRVGRALAGAGYVEALNYP 529 Query: 515 FISKEQSVLFGGG----QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 FI +E FG +R+L ++NP+S +RT+LLPGLL A RN R D A+ Sbjct: 530 FIGEEVLDQFGLAADDPRRDLVRLVNPLSDAEPALRTTLLPGLLGALRRNAGRGEHDLAL 589 Query: 570 FEVSHVYENDTPEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFVDLFD----- 620 FE V+ G + AA + R I G + R V D Sbjct: 590 FETGLVFRAT---GHEPAAATVPVDRRPTDEEIAGLDAALPHQP-RRVAVVLAGDREQAG 645 Query: 621 --AKADALSVIEPFVSLDSLRFESGAP--------SWYHPGRSGIIKT---SAEIVLGYF 667 K +S + + + E+GA +HPGR + EI++G Sbjct: 646 WWGKGTPVSWADAVEAGRIVAREAGAELIVRQDQQDPWHPGRCAALLAVVDGEEILVGNA 705 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP + GL+ C E+ LD + ++ T + H+S+ +D+A IVD Sbjct: 706 GELHPRVTKALGLAERTCAMEIELDRL---EQAGTGRVEAPHVSTFPVATQDVALIVDAS 762 Query: 728 IPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + A + ++ L++ + +FDVF G+ LGEG+KS+A + + T ++I Sbjct: 763 VAAADVETALREGAGELLESLRLFDVFTGEQLGEGRKSLAYALRFRAPDRTLTAEEIAAS 822 Query: 787 MDRIVENVVKKTNAVLRSS 805 D V +T A LR + Sbjct: 823 RDAAVSAAANRTGATLRGA 841 >gi|261337867|ref|ZP_05965751.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium gallicum DSM 20093] gi|270277336|gb|EFA23190.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium gallicum DSM 20093] Length = 866 Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 258/873 (29%), Positives = 412/873 (47%), Gaps = 98/873 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+D D++ +++ L +GLE E++ + + P + V+ P + I Sbjct: 4 IDWLREHVDVAQDLTYDQLAKDLVRVGLEEEEIHDSQVTGPIVVGYVVDATPEPQKNGKI 63 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ ++ ++CGAPN+ G V PG+ +P + + RK Sbjct: 64 INWCHVDVGDEYNDVDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIM---------ELPIDAPVGGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ E + G L L L P+++++ Sbjct: 123 YGHISDGMCASERELGLGDSHDGIILLKDYGFTPEEYENLKPGDDLMHLLHLDQPVLEIN 182 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL--- 213 +TP+R RG+A + A + E+N P ++ D+ Sbjct: 183 VTPDRGYAFSYRGVAREYADSTGATFTDPVNELNDQAPAATAGTADAGDIDVIIDDDAPI 242 Query: 214 -----CKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 C F V+G + + PNWMR+RL G+RSIS VD+TNYV LD G P H + Sbjct: 243 HGVVGCDRFYARAVRGYQPGSPTPNWMRRRLTRAGMRSISLPVDVTNYVMLDLGQPLHAY 302 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGKH 321 D +I + VRRA +GEK+ LD +++DLS ++++I R+ IAG++GG + Sbjct: 303 DLDKIEPPIVVRRAKAGEKLTTLDGKDHDLSVEDLLITDSPNGEQGSRVLGIAGVMGGLY 362 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 TT++L+E A +D + +ARS + I +++ RFERGVD + + SL+ Sbjct: 363 GEVTAETTNILIEAAHFDQVTVARSARRHKIPSEASRRFERGVDNKLQPAAAQMAASLLE 422 Query: 382 SLCGGTASDICI-ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY- 439 AS + N+ +P I F SEV R++G+D+P E ++ LE +G + E Sbjct: 423 RYGNAQASTTPVDVNNVDNRP-AIAFKASEVARVAGLDLPTETIVKKLEDVGCVLTAEGD 481 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D F V PSWR D+ DLVEE+ R+ G DQI +P VE L+ Q R V Sbjct: 482 DTFLVEAPSWRPDLTAPCDLVEEVARLVGYDQIPIH-VPHAPVEGHVGLTADQLHKRQVA 540 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQREL-----EILNPISADMSNMRTSLLPGLLK 554 LA M+EV+++ F+ F ++ EI+NP++ D +R S+L L + Sbjct: 541 DELAEYGMVEVLSYPFVGDADFKAFQYDPEQIAPISVEIVNPLAGDRPYLRRSILLTLAQ 600 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------PEG-----------------QKYMAA 589 RN+ R + + +++E+ HVY D P G Q A Sbjct: 601 TVQRNLHRGLDNVSLYELGHVYLWDPQAPAIPALPGGVRPTDEQLAALDAGLPEQPLHVA 660 Query: 590 GIRKGSS---GIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 GI G++ G G R W+D E R D A A+ + +P V + A Sbjct: 661 GILTGNAEDDGWLGDRRAVDWTDSVEAVHRIADRIGA---AIVLDQPTV--------ADA 709 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P+ +HPGR + + + V G GE HP++ + GL FE+ L ++ + + Sbjct: 710 PAQWHPGRVAYVVANGQQV-GIVGELHPHVNEALGLPAHAAAFELNLTALFATLSNKPVQ 768 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L I + +++ + +FDVF G+ +GEG K Sbjct: 769 AKPI--STFPPVKQDLAFTVADSVSAHDLHEAIARGAGDVLESIELFDVFTGEQVGEGMK 826 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 S+A V + T +D + RIVE K Sbjct: 827 SLAYAVTFRAADKTLTGEDTEAIRARIVEEAAK 859 >gi|294508838|ref|YP_003572897.1| phenylalanyl-tRNA synthetase beta chain [Salinibacter ruber M8] gi|294345167|emb|CBH25945.1| Phenylalanyl-tRNA synthetase beta chain [Salinibacter ruber M8] Length = 830 Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 252/842 (29%), Positives = 394/842 (46%), Gaps = 49/842 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL +++D D S E++ + LT GLEVE V ++L + KV +V +P+ D Sbjct: 1 MDVSYNWLNEYVDHDWSPEELAERLTMAGLEVETVRPLGQSLDGVVVGKVTAVREHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-------PE--NNMIVNVRKI 109 +L +D G Q+ CGAPNV G A G+ + PE + V R++ Sbjct: 61 RLVLCDVDLGDGAPSQIACGAPNVAAGQKVPVATVGTTLSLPDPDDPEARQELTVEAREL 120 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-----SDPIIDVSLTPN 164 RG S GM+C+E EL L+DD A IM L D PVG +YL+ +D ++D+ LTPN Sbjct: 121 RGEASNGMICAEDELGLADDHAGIMVLDDDTPVGTPFPEYLDAHGMPSTDAVLDIELTPN 180 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R D G+A D+ A +L+ + P + EI DL D + C + V+G Sbjct: 181 RPDAASHLGVARDVSALADSELRTPTVDTPSPGGPVAEEITVDLRDEAGCPRYVALLVRG 240 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACS 283 +P W+R+RL A+GL+ + +VD+TN+V + G P H FD I+ D + VRR Sbjct: 241 ADVTESPLWLRRRLTAIGLQPRNHVVDVTNFVLHECGQPLHAFDLDAIADDTIVVRRTDD 300 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 LD +E DL D ++I ++AG++GG ++ +TTDVL+E A +DP I Sbjct: 301 ETPFTTLDGEERDLPEDTLLICDAEAPVAVAGVMGGANSEVSADTTDVLIESAYFDPSTI 360 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 R+ K L + TDS YRFERGVD G + LI L GGT + + + K Sbjct: 361 RRTAKALDLQTDSSYRFERGVDRDGQVWAAARAAELIAELGGGTVVPGLVDEHPSPPAEK 420 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + + + + ++ G +VP ++ R+L +GF V D +VP+WR DV + DL+EE Sbjct: 421 TIALRPDRLTQVLGTEVPTDEGTRLLGAIGFDVEAGEDALHCTVPTWRSDVSIEEDLIEE 480 Query: 463 ILRIYGVDQIKSE---PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 + R++G DQI P+P E +L+ R +++L E+ S + + Sbjct: 481 VARLHGYDQIPEPEHVPVPSRTPEQPPEETLE----RQARQLLKGLGYREIYTNSMLRTD 536 Query: 520 QSVLF----GGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ F G R +E NPIS +M+ +R LLPG L+ N + +FE Sbjct: 537 RAERFNVPPAGSDRAPVVETKNPISEEMAALRPRLLPGALEVMQHNRNHGQEALRVFEFG 596 Query: 574 HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 V+ + + + SG + R D+FD K ++ Sbjct: 597 RVFRRAAEPDDPIVPGYSEHPALLVAVSGPHAPTGWDTEPRSADIFDLKGAVETL----- 651 Query: 634 SLDSLRF--------ESGAPSWYHPGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLSNPI 684 LD LR ++GA P I +A + LG ++ F L P+ Sbjct: 652 -LDDLRVPALQVRPRDAGAVDEAPPVTQHHIDVAAGDTPLGTVARVRDDVAADFDLDTPV 710 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-L 743 E + ++ + + + +S V RDLA +V P G L I+ L Sbjct: 711 FVAEFHWAAL-VDSATAEQHRDYEPVSRFPVVDRDLAVLVPADQPVGPLQRAIREAGAPL 769 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V VFD + G+ + E KSVA + + T D+++ +D IVE + + A LR Sbjct: 770 LRRVDVFDTYAGEGIDEDTKSVAFTLRFGADR-TLTDEEVDARLDAIVERLAENHGARLR 828 Query: 804 SS 805 Sbjct: 829 QQ 830 >gi|307243308|ref|ZP_07525475.1| phenylalanyl-tRNA synthetase, beta subunit [Peptostreptococcus stomatis DSM 17678] gi|306493326|gb|EFM65312.1| phenylalanyl-tRNA synthetase, beta subunit [Peptostreptococcus stomatis DSM 17678] Length = 796 Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 261/837 (31%), Positives = 420/837 (50%), Gaps = 75/837 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL+D++D D+ + D +T G + E V+ + +S + K+L +E +PD D Sbjct: 1 MLVSLKWLRDYVDIDLDAQTFGDKMTMTGTKTETVEYYGQDISNVVVGKILKIEGHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ GK Q +Q+V GA NV G A G+ +P I N ++RG+ES GMM Sbjct: 61 KLVVAQVEVGKDQPVQIVTGAKNVSEGDFIPVALDGAKLPGGVTIKN-GQLRGVESNGMM 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + + + I+++ G + + L L+D +ID LT NR DC Sbjct: 120 CSSNELGIDEKFVDDYKKNGIYILDMEESYVPGMDIKEVLGLNDAVIDFELTSNRPDCRC 179 Query: 171 VRGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + GIA + A LG K E+N+ S I +EIK +++ LC + V V+ Sbjct: 180 MIGIARE-AAVTLGTKTKYPEVNVK-EESDREIDVEIK--IENPDLCSRYLARRVTDVKI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEK 286 +P WM++RL G+R I+ +VDITN+V L+ G P H FD I + + VR A GE Sbjct: 236 EKSPYWMQRRLIEAGVRPINNIVDITNFVMLEMGQPMHAFDMREIGNKKIVVRNAKEGEV 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD QE L P+ ++I + + +AGI+GG +G D+T +++ E A+++ NI +S Sbjct: 296 FTTLDGQERRLDPEMLMITNGEKTLGVAGIMGGLESGIKDDTVEIMFESAVFNRENIRKS 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--------SDICIARNIT 398 K LG+ ++S RFE+GV L L+ L+ L G ++ + IT Sbjct: 356 SKKLGLRSESSSRFEKGVSLDNAELALERAAQLVEILGAGKVMRGKVDEYPEVKPLQTIT 415 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEK 456 PR+I N+ + GID+P++ ILE L F +++ E D+ + VPS+R D+E++ Sbjct: 416 VSPRRI---NARI----GIDIPMDKFCGILEDLEFKCNLVSE-DELILEVPSFRLDIEQE 467 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR---AMMEVVNW 513 AD+ EEI RIYG + I P Q++ ++ + +Y++RV + + E + + Sbjct: 468 ADIFEEIARIYGFENI-----PSVQLQGNSTAGVKTDKQKYLERVKDTALACGLYETLTY 522 Query: 514 SFISKEQ----SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 SF+S + V R+ ++++NP+ D S MRT+L+P +L N R I A Sbjct: 523 SFVSPKGLDKIRVPQDSKLRDVVKLINPLGEDTSIMRTTLIPNMLDVVYTNSSRNIDQLA 582 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 IFE HV+ D G + I G+ G G VD F K + Sbjct: 583 IFECGHVFTPDDMAGVEETRICI-----GMYGDG-------------VDFFVLKGMVEKI 624 Query: 629 IEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 E V L R+ + + +HPGR I + LG GE HP +LD +G+ + Sbjct: 625 FER-VGLRGHRYLADKNNTSFHPGRCADILCDNKF-LGTIGEIHPEVLDNYGIGKRVYIA 682 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDD 746 E+ LD++ S T K L + RD+A +V + + +I N L++ Sbjct: 683 EIDLDTV-YSLANDTIVFK--SLPKYPAITRDIALVVKNEVEVAAIEEVIMDNAGGLVEA 739 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++G +G+G KSVA ++ + L T DDD+ + D+I+ + + A LR Sbjct: 740 CKLFDVYKGDQIGQGYKSVAYSLVYRSLDKTLTDDDVVAVHDKILAELKARLGAELR 796 >gi|282891508|ref|ZP_06300000.1| hypothetical protein pah_c178o028 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498599|gb|EFB40926.1| hypothetical protein pah_c178o028 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 800 Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 253/820 (30%), Positives = 407/820 (49%), Gaps = 44/820 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK LSWLK+ ++ + +I LTS GLEV+ V A + +VL E++P+ D Sbjct: 1 MKIPLSWLKEWINLTLLPHQIEKKLTSAGLEVDAVTPISAGFQKVVVGRVLKTEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGIESTG 116 + + T +E QVVCGAPN R G+ +A G+ I + + KIRG+ES G Sbjct: 61 KLCVAVVTDGLEEYQVVCGAPNCRPGIKTAFAMVGATIEDKEGKTFKIKASKIRGVESFG 120 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL LSD+ I+E G L+ D I ++SLTPN S C V G++ Sbjct: 121 MLCSASELNLSDEHDGILEFADHFQEGADLASIY--GDTIFEISLTPNLSHCSSVLGVSR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +L A + N+ + + I ++K + + LC +A ++GV+ +P+WM++ Sbjct: 179 ELSATTGFPVIYPNVQLKETEKPIQDQVKVTVTEPLLCSRYACRFIEGVKIGPSPDWMQK 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEY 295 RL G+R I+ +VD+TNYV L+ G+P H FD S + + VR A EK++ LD +E Sbjct: 239 RLLQCGIRPINNVVDVTNYVLLEMGHPLHAFDFSLVKGAEIIVRTAHEQEKMVTLDGKER 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L ++I + +IAGI+GG+++ D T +L+E A +D NI ++ K+LG++TD Sbjct: 299 ELPKQALLICDREKPIAIAGIMGGQNSEVSDQTHTILLEAAYFDSRNIRKTSKSLGLLTD 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRL 414 + RFERGVD ++ L LI L GG A I ++ + P+ + S + L Sbjct: 359 ASKRFERGVDPTQVLASLDRAAELIQQLAGGVIAQGILDVKSHEFFPKTVTCRLSRINSL 418 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 GI + + I ++LGFSV +YD F V VP++R D+ + DL+EE+ RIYG D Sbjct: 419 LGIHISASEVESIFQKLGFSV--QYDGQDLFSVQVPTYRNDISLEVDLIEEVARIYGYDN 476 Query: 472 I-KSEP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-- 527 I K P + + D + R V+ L + + E + I L G Sbjct: 477 IEKRAPRYHGSTIPDAPIFHFE----REVRGQLIAAGLQEFLTCDLIGPSLLQLVGDSLM 532 Query: 528 --QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 +++++NP S + S +RTSLLPG+L+ N DR + FEV V+ EG + Sbjct: 533 DEATQVKVVNPTSIEQSVLRTSLLPGILQLIKHNWDRQNRHISGFEVGRVH---FKEGSR 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS---LDSLRFES 642 Y+ + + W+ K E+ VD FD K +IE F+ + + FE Sbjct: 590 YIEDPVVAIVLTGKSRPHHWNQKPED----VDFFDLKG----IIETFLHELRIPACTFEK 641 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV-YLDSIPISQKKR 701 +HPGR ++ A + +G GE HP I + I E LD + + Q++ Sbjct: 642 SDLEIFHPGRRASVQVGA-LKIGSLGEVHPAICRKLDVGQRIFFAEFNLLDLMGVRQEEP 700 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + ++ SS +RD + IP + + I V L+++V + DV+ LG+ Sbjct: 701 RMREVPIYPSS----ERDWTLTLKNSIPIQNVFDWIHAVRSNLLEEVVLLDVYTSDKLGK 756 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 K+V + + K T + + RI+ V ++ ++ Sbjct: 757 DCKNVTFRFTYRDAKRTVAQEKVDADHARIMGYVTEQISS 796 >gi|255535063|ref|YP_003095434.1| phenylalanyl-tRNA synthetase subunit beta [Flavobacteriaceae bacterium 3519-10] gi|255341259|gb|ACU07372.1| Phenylalanyl-tRNA synthetase beta chain [Flavobacteriaceae bacterium 3519-10] Length = 800 Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 253/833 (30%), Positives = 413/833 (49%), Gaps = 62/833 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WL+D + TD+ +K + LT IGLEVE +D E+ L + KVL+ ++P Sbjct: 1 MKISNNWLQDFIKTDLKADKTAEYLTDIGLEVEGIDKYESVKGSLEGIVVGKVLTCSQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D +D G + + +VCGAPNV G A G+ + + +++ KIRG Sbjct: 61 NADKLKKTTVDVGGGKILNIVCGAPNVEAGQTVPVAVVGTQLFMKDGSPLVIKEAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDA-PVGGRLSDYLEL-SDPIIDVSLTPNRSDCIG 170 S GM+C+E EL LSDD IM L + VG +DY EL SD + ++ LTPNR+D + Sbjct: 121 VSQGMICAEDELGLSDDHGGIMVLDENKFEVGKNFADYFELTSDEVFEIGLTPNRTDAMS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A L + + L S+++ + + + +++D +LC + ++ V+ Sbjct: 181 HYGVARDLNAV-LTSNQIKSTFEKLESKTLNITGTADFQLEVEDDALCPRYIGAVIENVK 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P+W++ RLKA+GL I+ +VDITNY+ G P H FDA +I + V G Sbjct: 240 VADSPDWLKDRLKAIGLSPINNIVDITNYILHGFGQPLHAFDADKIEGKKVIVGVNAEGT 299 Query: 286 KILALDNQEYDLSPDNVVIASD-GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K LDN E L+ ++I G+ I G++GG+ +G T V +E A ++P+ + Sbjct: 300 KFTTLDNIERTLNGSEIMIKDGAGKPMCIGGVLGGQTSGVSTETQTVFLESAYFNPVAVR 359 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K+ G+ TD+ +RFERGVD + H +++I + GG + + + P KI Sbjct: 360 KAAKHHGLNTDASFRFERGVDPNSTRTAITHAIAMIEEVAGGKLAGALLE----HYPEKI 415 Query: 405 -----VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKAD 458 + S+V+++ G + E IL+ L V+ E + E+SVP++R DV + D Sbjct: 416 ENNYVILRFSKVEQILGTKIHREKIKEILKLLDIQVLNEIQNGLEISVPAYRADVTREID 475 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++EEILRIYG ++I S P ++ + N Q + R L S EV+N S S Sbjct: 476 VIEEILRIYGYNKIDS-PQKISFTPARLNPEDQDALENAWARTLQSNGFNEVMNNSLTSV 534 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + +++LNP+S+D+ MR SLL GLL+ N+ R AD FE VY Sbjct: 535 KDET------HAVKLLNPLSSDLQFMRKSLLEGLLENADYNIKRKTADIKFFEFGKVYHK 588 Query: 579 DTPEGQKYMAAGIRKGSSGIEG------SGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 ++ A + G + E + W KS + D L++ Sbjct: 589 TDKYVERKQLAMLVSGRNNAENWLLAKCATDFWYLKSYVKTLL--------DKLNLNIEE 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL+ RF S A G++ + G+ +L L E+ L+ Sbjct: 641 KSLEDARF-SDALELAADGKT----------IARLGKVSTELLKGADLDQDCFYAEIELE 689 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 + Q + T T K + + ++RDLA +VD+++ L KN + + ++ +FD Sbjct: 690 T--CQQLRSTGTFKFNDIPKFNKIRRDLALLVDKNVTYAELYQQARKNPSKYLKNINLFD 747 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V++GK+L EGKKS A+ + T + DI +M+ ++ K+ A LRS Sbjct: 748 VYEGKNLPEGKKSYAMSFELLNEDKTLEEKDISEVMNSLINGFKKEFAAELRS 800 >gi|329769661|ref|ZP_08261065.1| phenylalanyl-tRNA synthetase [Gemella sanguinis M325] gi|328838416|gb|EGF88025.1| phenylalanyl-tRNA synthetase [Gemella sanguinis M325] Length = 797 Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 228/808 (28%), Positives = 413/808 (51%), Gaps = 37/808 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLK + + + + + + +T G+EVE V+ + +S + V + E++PD + Sbjct: 1 MLVSYNWLKQYTNIEDNATDLAEKITRGGIEVEGVEYLADNISNVVVGYVETKEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ ++Q+VCGAPNV G + A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCTVNVGEEDKLQIVCGAPNVDAGQYVIVAKVGATLP--GIKIKKAKLRGVESQGMI 118 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS KEL L+ I + +G + L L+D I+D+S+TPNR+D + +R Sbjct: 119 CSLKELGLNQSVVPKNYQDGIYVFESEQKLGADAVEVLGLNDYILDLSITPNRADALSMR 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A +L A K+ + + L++ + D CK + VK + +P Sbjct: 179 GLAYELGALYNQKVTFADSEVEENYSDTELKVVVESDS---CKNYLGQVVKNIEVKDSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ RL G+R I+ +VDITN+V L+ G P H FD + + + VR A GE + LD Sbjct: 236 WLQTRLMNSGIRPINNIVDITNFVLLEFGQPMHAFDKDLVGNSIVVRNAKEGEVLETLDG 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L ++VI + ++ G++GGK+ +NT ++++E A ++P+++ R+ G+ Sbjct: 296 EERKLQESDLVITDGTKPIALGGVMGGKNTEVSNNTKNIILESAYFNPVSVRRTSAAHGL 355 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +DS RFE+G+D ++ V LIL LC + + + +++V S + Sbjct: 356 RSDSSARFEKGIDPNMQKAAIQRAVELILELCPNATVEASVGVVNKEEKKEVVISTSYIN 415 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 GI + E+ ILE L FSV + ++ V +P+ R D+ K DLVEE++RIYG D + Sbjct: 416 NYLGITLSTEEITSILESLSFSVEVDGEELTVKIPTRRPDISIKQDLVEEVIRIYGYDNL 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQREL 531 S LP K L+ Q R +++V + +N+S +S E+S + ++ Sbjct: 476 AS-TLPKFSKTTKGGLTYSQRAIRDLRKVYVGLGFNDTINYSLVSDEESTQYTLDNHHKV 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPEGQKY 586 ++ P++ S +R SL+PGLL NV R D + E+ V+ +N P+ Y Sbjct: 535 RLMMPMTETHSTLRQSLIPGLLNTVQYNVARKQKDLKLLEIGRVFFGSGDDNIQPKETLY 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFESGAP 645 ++ + +G E S + + S +D + AK L VI + LD + ++ Sbjct: 595 LSGAL----TGEENSTKWLKESS-----VIDFYTAKG-YLEVIFERLGLDEKVSYKKAKL 644 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ + E ++G+ GE HP + L N FE+ LD + K + K + Sbjct: 645 DGMHPGRTAEVYL-GEKLIGFIGEIHPVVASDKDL-NETYVFEINLDEVISESKVKPKYE 702 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 +V + + RD+A +VD + ++I++++ +LI + +FD++ G L GKKS Sbjct: 703 EV---TKYPEITRDIAMLVDIVDEYQNIYDVIESINSKLITKIELFDLYVGPELLVGKKS 759 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +A+ + + T D+++ + +++++ Sbjct: 760 IALTITYSDKQKTLTDEEVTKVHEKVLK 787 >gi|288802290|ref|ZP_06407730.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella melaninogenica D18] gi|288335257|gb|EFC73692.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella melaninogenica D18] Length = 822 Score = 340 bits (871), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 256/839 (30%), Positives = 414/839 (49%), Gaps = 53/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D ++S E+I LTSIGLEV +D R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFNLSPEEIAVALTSIGLEVGSLDEVETIRGGLKGLYVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + +N + K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDNEFTIKRSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG S+Y +L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGVGTAHDGIIVLPEDAPVGQPASEYYQLDSDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A E ++ P + ++ L I ++++ C+ +A + Sbjct: 181 GVARDLYAWLTQNGYETSLHRPSCDAFTVDNHDLPIDVTIENTDACRRYACLSITDCEVE 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G+K Sbjct: 241 ESPQWLKDKLNIIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKDKNEGKKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ L ++ I ++ IAG+ GGK +G + T +V++E A + P I +S Sbjct: 301 VTLDGEEHILGEHDLAICNEEDPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG+D G+I LK L L GG S T V + Sbjct: 361 RRHGLSTDASFRFERGIDPNGVIYALKQAAILCKELAGGKVSMEIRDEYPTKMEGFPVRL 420 Query: 408 NSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILR 465 N E RL G + E RI E L V E + + VP +R DV+ D+VE+ILR Sbjct: 421 NYEYCDRLIGKKLGNETIKRIAESLEMKVEKEDAEGLNLLVPPYRVDVQRPCDVVEDILR 480 Query: 466 IYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--- 517 IYG + ++ L + + DK R + L E++N S Sbjct: 481 IYGYNNVEIPTELKSSLTIAEEADK-----NYHRENIIGEQLVGAGFSEIMNNSLTKSSY 535 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 +E + + ++++NP+SAD+ MR +L G L++ RNV+R + FEV +VY Sbjct: 536 YEETGLNAYPWEETVKVMNPLSADLGVMRQTLFFGGLESIVRNVNRKAQNLRFFEVGNVY 595 Query: 577 E-------NDTP---EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 + ++P Q Y A G ++GS W+ EE ++ KA Sbjct: 596 KFNKEKWSEESPVKAYSQDYHMALWVTGKR-VQGS---WAHPDEEST----FYELKAYVE 647 Query: 627 SVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +++ ++ L E + + ++ ++KT A VL G +L F + + Sbjct: 648 NILRRIGIAQGLLVSEKSDNNVFD--KAIVLKTRAGKVLVEMGILSHKLLKSFNIDQKV- 704 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 + LD + + R + +S V RDLA +VD ++ + I + D +L+ Sbjct: 705 -YYAELDWAGLMKAIRKNKLQFQEISKYPAVSRDLALLVDNNVEFAQIEEIARQADKKLL 763 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A LR Sbjct: 764 KRVELFDVYQGKNLPEGKKSYAVNFILQDESKTLNDKAIDAIMQKLIKNLTNKLGAELR 822 >gi|326803181|ref|YP_004320999.1| phenylalanine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] gi|326651645|gb|AEA01828.1| phenylalanine--tRNA ligase, beta subunit [Aerococcus urinae ACS-120-V-Col10a] Length = 816 Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 244/816 (29%), Positives = 420/816 (51%), Gaps = 57/816 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + +WL + +D D+ E + + L+ GLEV+ ++ + L + K L+VE++P+ Sbjct: 4 MLASRNWLNEFVDIKDIQDEALAEDLSRTGLEVDGLNQDFSGLKKIVVGKTLTVEKHPNA 63 Query: 59 DC-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + +Q+VCGAPNV G + A G+ + N I K+RG ES GM Sbjct: 64 DSLHVCQVDVGQEEPLQIVCGAPNVAAGQKVIVALHGARVAGNQKIKK-GKLRGQESNGM 122 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL S++ + IM LP DAP+G + DYL L D ++D+ +TPNR+D + + Sbjct: 123 LCSLQELGFSENVIPKEFANGIMILPEDAPLGQDIKDYLHLEDTVLDLDITPNRADALSM 182 Query: 172 RGIALDLVAAGLGKLKEINISCPL-----------SSESIPLEIKFDLDDSSLCKGFAMC 220 RG+A +L A CP+ + + E+ ++ DS L + Sbjct: 183 RGVAYELSAI---------YDCPIDINTYDDQAFEAGSDLSDEVTVEISDSELFPHYTAH 233 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVR 279 VK V+ +P ++ RL G+R I+ +VD TNYV L+ G P H FD ++ S + R Sbjct: 234 LVKDVKIQASPIEVQIRLMKEGIRPINNVVDATNYVLLEYGQPLHAFDYDKLQSKTIAPR 293 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A +GEK++ LD E DL+ D++VI ++AG++GG DDNTT+VL+E A+++ Sbjct: 294 LAKTGEKLVTLDGVERDLTDDDLVITDGQEPIALAGVMGGLSTEIDDNTTNVLIESAMFN 353 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNIT 398 +I R+ + L + ++S R ERG+++ + + L+ GG A ++ Sbjct: 354 SSHIRRTARRLALRSESSLRNERGLNIATIDEAGAYAAQLMEDWAGGQAVKGRSRVSHLD 413 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 K +++ + + L G+++ E+ RLGF V G D+F VSVP+ R D+ AD Sbjct: 414 VKDKEVTTNLAYITSLLGMEISFEEVKESFRRLGFPVEGAADEFTVSVPTRRWDISIPAD 473 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 LVEE+ RIYG D+I S P+ V K L+ Q R R + + +V+++S S Sbjct: 474 LVEEVARIYGYDKIPSRISPVQPV--KIGLNDWQKFERQSHRTMEALGFDQVISYSLTSE 531 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 K+ VL + + P+S + MRT+LL LL N+ R + D I+E+ V+ Sbjct: 532 KKLDVLQVQAHEAVALDFPMSDERRYMRTNLLTSLLDIAQYNLARKVKDVQIYEIGRVFY 591 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 E+D P + ++AA + +EG W K++ VD +D K S++ + Sbjct: 592 DDEIEDDLPREESHLAA---LWTGDVEGDS--WQGKAQA----VDFYDMKGAVESLLASY 642 Query: 633 VSLDSLRF-ESGAPSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDFFGLSNPICGFE 688 +R+ +S HPGR+ +++ + + +GY + HP I + L+N E Sbjct: 643 NLAGQIRYLQSTDLPDTHPGRTALVQVEDQGEWLTIGYLAQLHPQITKDYDLNNQSFVAE 702 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDV 747 L +I + + + + S + RD+A +V + + +V I K + + +V Sbjct: 703 FNLQAIYDLPEHQVIQEPLAKYPS---ISRDIAMVVAEEVSHAEIVATIQKAANSYLVNV 759 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 +FD+++G+ + +G+KSVA Q+ + T D+++ Sbjct: 760 KLFDIYRGEHIQDGQKSVAYQLTYLNPEATLVDEEV 795 >gi|56808022|ref|ZP_00365825.1| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Streptococcus pyogenes M49 591] gi|209559142|ref|YP_002285614.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes NZ131] gi|209540343|gb|ACI60919.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pyogenes NZ131] Length = 801 Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 242/832 (29%), Positives = 426/832 (51%), Gaps = 60/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ + + +++ G+EVE ++ E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVTPAALAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDETPRQIVCGAPNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEFSDGIQILPEEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +SE+I + I S+ +A V+ V+ Sbjct: 180 VAHE-VAAIYGKSVSFPQKNLQESDKATSEAIEVAIA-----SNNVLTYASRVVENVKVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D V RA GE + Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDKFEDHKIVARAARQGESL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD ++ +L+ +++VI + ++AG++GG+ D N+ V++E A++D +I ++ Sbjct: 294 VTLDGEKRELTTEDLVITVADKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L G S A + +P +I Sbjct: 354 GRLNLRSESSSRFEKGVNYATVLEALDFAAAMLQELAEGQVLSGRVQAGQLPTEPVEIST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ ED + ++LGF + G+ F V+VP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTELTFEDIQTVFDQLGFGLTGDETSFTVAVPRRRWDISIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVED----KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 YG D++ LT + + L+ Q+ R V+ + + E+++++ + E++V Sbjct: 474 YGYDKL------LTTLPEAGGTAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAV 527 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--- 578 F L E++ P+S + S +R +++ G+L NV R ++ A++E+ ++E Sbjct: 528 EFAVAPSHLTELMWPMSVERSALRQNMVSGMLDTIAYNVARKQSNLALYEIGKIFEQEAN 587 Query: 579 ---DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 D P + A I G + + + + VD + AK L + ++L Sbjct: 588 PKEDLPNEVNHFAFAI---------CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNL 637 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + + HPGR+ +I E V+G+ G+ HP + + E Y+ + Sbjct: 638 KVQYVPTKDLASMHPGRTALILLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELD 690 Query: 696 IS--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFD 751 ++ + + ++ L + RD+A ++D+ + +V I++ V RL + +FD Sbjct: 691 MAALEAALPSDQTFAEITKLPAMTRDVALLLDREVSHQAIVTAIESAGVKRLT-KIKLFD 749 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++G ++ GKKS+A + Q D D+++ M++I + + ++ A +R Sbjct: 750 VYEGVTIQAGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEQVGAEVR 801 >gi|327439288|dbj|BAK15653.1| phenylalanyl-tRNA synthetase beta subunit [Solibacillus silvestris StLB046] Length = 801 Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 242/821 (29%), Positives = 407/821 (49%), Gaps = 46/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEK--ICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPD 57 M +L WL ++D SLE + + +T G+EV+ V D + ++ + V+S E++P+ Sbjct: 1 MLVSLKWLSQYVDIS-SLEANVLAEKITRAGIEVDAVIDRSQGMTNVVVGHVVSKEKHPE 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + Q+VCGAPNV G + A PG+ +P + + K+RG ES G Sbjct: 60 ADKLNVCQVDVGEEELQQIVCGAPNVDAGQKVIVARPGAKLP-GGIKIKKAKLRGQESNG 118 Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS +EL + + I LP D G D L L D ++++ LTPNRSD + Sbjct: 119 MICSLQELGIEGRLVPKAYAEGIYVLPADTTPGADALDVLGLRDTVLELGLTPNRSDAMS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G+A ++ A +K I S+E +K ++D +A VK + + Sbjct: 179 MLGVAYEVAAILSQDVKLPKIDYTASAEEAADVLKLTVEDKEANPMYAAKVVKNIEVKES 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P W++ L + G+R + +VDITNYV ++ G P H FD +++ + R A GE + Sbjct: 239 PLWLQHALMSAGVRPHNNVVDITNYVLMEYGQPLHAFDYDKLATGEIVTRMARDGEVMTT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+QE L+ N+VI + +++AG++GG + ++TT V++E A ++P ++ R+ K Sbjct: 299 LDDQERKLASHNLVITNGQEAEAVAGVMGGAKSEVSNSTTTVVIESAYFNPASVRRTSKE 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMN 408 +G+ +DS RFE+GVD ++P + L+ L GG + + + P ++V Sbjct: 359 IGLRSDSSARFEKGVDPNRVLPAAERAAQLLAELAGGEVLEGTVLVDELDKTPARVVVSP 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + G+ + +ED L ILERL F V + P+ RQD++ D+VEEI R+YG Sbjct: 419 DFINGRLGMKISLEDMLSILERLKFDVEAANGLLIIDAPTRRQDIKIPEDIVEEIARMYG 478 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D+I P+ L E L+ Q+ R V+ V+ + + V +S S + F Sbjct: 479 YDEI---PVSLPASEQVGRLTPYQAGRRIVRNVMEGAGLYQAVTYSLTSAAHAQKFALKA 535 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + ++L P+S + S +R SL+P L++A NV R A++E+ V+ T E + Sbjct: 536 EETTKLLMPMSEERSTLRQSLIPHLVEAASYNVARQAETVALYEIGSVFLGQTAEELPFE 595 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + +G W D + + + VD F AK +V + + Sbjct: 596 EEHLALVLTG------KWIDNTWQGEKKNVDFFVAKGIVEAVFAKLGLTSRVSYVKAQVD 649 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ + E V G + HP+ F + E Y+ + ++ ++ Sbjct: 650 GLHPGRTADVLLDGEKV-GVIAQLHPHEQKAFDVK------ETYVAELNLNAILSATQEE 702 Query: 707 VVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKK 763 +V+ + + RD+A +D PAG +V+IIK L+ +V VFDV+ G+ + GKK Sbjct: 703 LVYSMIPRFPAMSRDIALELDVAAPAGEIVSIIKGAGTSLLKEVKVFDVYAGEKMTAGKK 762 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 SVA + T+ D + R L D E VV N VL++ Sbjct: 763 SVAFSL-------TYFDPE-RTLTD---EEVVAAHNKVLKA 792 >gi|194397698|ref|YP_002037244.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae G54] gi|194357365|gb|ACF55813.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae G54] Length = 801 Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 249/825 (30%), Positives = 427/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +I+ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQINVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETDQVAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E+ L +I + + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 701 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|218288880|ref|ZP_03493131.1| phenylalanyl-tRNA synthetase, beta subunit [Alicyclobacillus acidocaldarius LAA1] gi|218240969|gb|EED08146.1| phenylalanyl-tRNA synthetase, beta subunit [Alicyclobacillus acidocaldarius LAA1] Length = 803 Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 260/837 (31%), Positives = 418/837 (49%), Gaps = 67/837 (8%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 M+ + WL ++LD +S ++ D LTS GL V+ VD NR + I K+L V +P Sbjct: 1 MRASYKWLAEYLDLAGLSPAELADRLTSAGLAVDAVDPLNR-GVEGVVIGKILEVRPHPQ 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + R+D G Q +++VCGAPN L+ A PG+ +P + + + + RG+ S G Sbjct: 60 ADRLKVCRVDVGGRQ-LEIVCGAPNAAPDLVVPVALPGAKLP-GGVEIRIAEFRGVSSHG 117 Query: 117 MMCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS +EL + D+ + LP D P+G + +L L D ++D+ LTPNRSDC+ Sbjct: 118 MLCSAEELGIDTRYLPKRDAEGLFVLPSDLPLGADVVPHLHLDDVVLDLDLTPNRSDCLS 177 Query: 171 VRGIALDLVAAGLGKLK-EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 +RG+ +L A + ++ P + PL++ + + C + ++GV Sbjct: 178 IRGLVHELSAILRRPHRFPASVPAPAAEGESPLQVHLE---TPRCPRYEAQLLEGVEVRE 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 P WM+ RL A+G+RSI +VD+TNYV L+ G P H FDA I+ + VR+A GE+++ Sbjct: 235 TPLWMKMRLLAMGVRSIDLVVDVTNYVMLEWGQPLHAFDADAIAHATIVVRQAREGERLV 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+PD +VIA + +AG++GG+++ +T + +E A +D +I R+G+ Sbjct: 295 TLDGQERALTPDMIVIADPEKAIGLAGVMGGENSEIGPSTRRIALESARFDGASIRRTGQ 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKIV 405 L + ++++ RFE+G+D + L L++ L G A A+ KP I Sbjct: 355 ALSLRSEAQQRFEKGIDPAAVSSALHRATELLVQLAGSRPVGAPRRVPAQEEVSKPTVIS 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 F R G+DVP E+ L E LGF V +++ V VP+ R DV+ ADL EE+ R Sbjct: 415 FSPRACVRFLGVDVPEEEMLACFESLGFGVTQGENEWRVEVPTRRPDVQLPADLYEEVAR 474 Query: 466 IYGVDQIKSEP--LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +YG D I + P LP+ E +L L R ++R L + EV ++ S E L Sbjct: 475 LYGYDHIPATPMRLPVEAPESSGHLPL----LRRMRRALVDWGLHEVRTYALTSPEAEAL 530 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------E 577 + +L P+S D +R LLP L + N+ + AIFEV V+ + Sbjct: 531 VAPSGAPVSLLRPMSDDRRILRRHLLPSLAEVARHNLAHQVLGGAIFEVGKVFLAASWPQ 590 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE----ERCRFVDLFDAKADALSVIEPFV 633 + PE + + G LW ++E ER R D +DAK +++ Sbjct: 591 EELPEERAVL--------------GMLWFGETEGDLFERPRRYDFYDAKGMCDALLARLG 636 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG-FEV-YL 691 + R A + HPGR I+ + E + G GE HP++ + + + + F++ L Sbjct: 637 IQATYRVSHHA--YLHPGRQASIEVNGEPI-GLVGELHPDVGEAYEVDRAVYAEFDLGRL 693 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNV--DRL-IDDV 747 S+ S + T + HP +RDLA +V + + + LV+ DR + V Sbjct: 694 LSLASSDVRVTPIPR-------HPASRRDLAVVVPRELESQALVDAAWQAVGDRGDLRLV 746 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VFDV+ G + EG KS+A+ + Q + T D +I +D ++ A LR+ Sbjct: 747 RVFDVYTGAGVPEGYKSLAVALWFQRDERTLTDAEIDEAVDAVLRAWEAAFGAKLRA 803 >gi|307710435|ref|ZP_07646874.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] gi|307618847|gb|EFN97984.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK564] Length = 801 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 426/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +S + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLSETDQAAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + + S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSGSSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNSDSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPADPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|291529392|emb|CBK94978.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Eubacterium rectale M104/1] Length = 806 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 251/831 (30%), Positives = 424/831 (51%), Gaps = 62/831 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLDCAIL 63 LSWLKD++D DV+ +++ + L S G EVE+ + + +S + V E P+ ++ Sbjct: 5 LSWLKDYVDIDVTPKELEEKLFSCGFEVEESYEVGKDISNVVVGLVEKCEPIPETHLSLC 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIP-ENNMIVNVRKIRGIES 114 +++ G H Q+ CGA NV+ G L+G V+A + E M + K+RG +S Sbjct: 65 QVNAGAHGTFQICCGADNVKAGGKYPLALIGATVYATAKDHVTVEGVMEIKQGKLRGYDS 124 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL L++D ++ LP DA G + L L D I D+++T NR DC Sbjct: 125 YGMLCSGVELGLNEDLYPGAGYNGLLVLPEDAKAGDDVKPILGLDDWIFDIAITANRPDC 184 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVR 226 + G+A + VAA LGK LKE + +++ + E K + +C + V V+ Sbjct: 185 QCIYGMARE-VAAVLGKELKEPALD--YTADDVKKENFKVSVLAQDICPRYTAHYVHDVK 241 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 + +P WMR+RL VG+ SIS +VDITN++ + G P H FD S + D + VRRA GE Sbjct: 242 ISESPAWMRKRLALVGIGSISNVVDITNFILKELGQPMHAFDYSYLEGDEIVVRRANDGE 301 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI+ LD +E++L+ +N+VI + ++AGI+GG ++ +D TT+V+ E A + NI + Sbjct: 302 KIVTLDEKEFELNSNNLVICDGKKAVALAGIMGGLNSEINDGTTEVMFESAKFARDNIRK 361 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS-DICIARNITYKPRK 403 S + LG +DS + +GV+ +K + L+ L CG +S + + + +P++ Sbjct: 362 SSRALGQSSDSSALYSKGVNEYTTAMAMKRALHLMEELGCGKVSSTHVEVTTGNSLEPKE 421 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++V + GI+VP ED +RIL LGF+ + D+ + +P++R+D+E+ D+ EE+ Sbjct: 422 MKVSIAKVNGVLGIEVPTEDIVRILTNLGFAPVVSGDELTLMIPAYREDMEDYPDVAEEV 481 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R+YG D + +P QV L+L+Q R +K VL + E +++SF S L Sbjct: 482 IRMYGYDHVIPAFMPTAQV-TLGGLNLRQQTERKIKEVLCAAGAYEGIHYSFFSPADLDL 540 Query: 524 F-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + ++NPI+ D+S MRT+L +L A RN + I + IFE+ +++ Sbjct: 541 LRFPEDAPERHAIRLINPINVDLSLMRTTLASEMLYAIARNQKKGILEGRIFELGNIFIA 600 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + P+ ++ + AG+ + E L + ADAL V Sbjct: 601 KELPLTEYPDERETLCAGV--------------FGEDESFFTIKGLAETVADALDV---- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ + HP ++ + + V GY G+ I D + P + + LD Sbjct: 643 ----KFTYKPAQKPFLHPYQTAEVFCDGQKV-GYLGQVRYEICDELDMRVP--AYVMELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDV 752 +SQ K + +S KRD AF+VD+ I + N I+ + DVT+FDV Sbjct: 696 LRVLSQ-WYGKDRVFTPISKFDDEKRDFAFVVDKDITCEQIENGIREACDYVSDVTLFDV 754 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G L KKS+A V+ P + + + + I+ ++ + LR Sbjct: 755 YEGVQLPPNKKSMAYSVVFTPKDEELKTKKVEGFVKDILAHLKETAGITLR 805 >gi|291545064|emb|CBL18173.1| phenylalanyl-tRNA synthetase beta subunit [Ruminococcus sp. 18P13] Length = 792 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 248/829 (29%), Positives = 407/829 (49%), Gaps = 68/829 (8%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLDCA-I 62 + WL D++ ++ +++ C +T G +VE + ++S + K+LS+ + + D + Sbjct: 1 MKWLSDYIQEEIPVKEFCHCMTMSGSKVEGFETEGSSISKVVVGKILSIAPHENADALFV 60 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 +++ G +Q+V A NV+ G L A G+ +PE + K+RG+ES GM C + Sbjct: 61 CQVEIGTEAPVQIVTNARNVKPGDLVPLALDGATLPEGK--IKKYKMRGVESFGMFCGLE 118 Query: 123 ELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 L L+ D +++ P VG + L L+D ++ +T NR DC+ V G+ Sbjct: 119 TLGLTVHDFPYADPDGVLVIQEPCQ--VGEDIHSALGLNDTSVEFEITSNRPDCLSVIGL 176 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A + A L + +SES+ ++ ++ +++LC + VK V+ +P WM Sbjct: 177 AREAAATFHVPLHLHAPAFHANSESVSEQLSVEVQNTTLCPRYCAGMVKNVKIGPSPRWM 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQ 293 R+RL+A G+R I+ LVDITNYV L+ G P H FD + D +TVR A GE+I LD Sbjct: 237 RERLRASGVRPINNLVDITNYVMLEYGQPMHAFDLRYVQDARITVRNAKDGEQITTLDGT 296 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E LSP+ +VIA + ++AG++GG+++G ++TT V+ E A ++P + + K LG+ Sbjct: 297 ERKLSPEMLVIADSEKPIAVAGVMGGEYSGIMEDTTTVVFESAYFEPTQVRLTAKKLGMR 356 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNSEVK 412 TD+ R+E+G+D I VL L+ L G I N +P+ V F + + Sbjct: 357 TDASARYEKGLDPNSTITVLSRAFELVEQLGAGEVVGGIIDVNNVGEPKPPVPFDANWIN 416 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G +P D + L L F V + V PS+R D+E KAD+ EEI RIYG + I Sbjct: 417 GFLGTSIPESDMIHYLNELHFKV----EDGMVYAPSFRIDIECKADVAEEIARIYGYNNI 472 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQ- 528 S L + D R L+ Q R +++ + + E+ +SF+S ++ L + Sbjct: 473 PS--TELQGLADAR-LTPAQIFNRQIEQSMVALGCYEIAAFSFVSPKYFDKIALPADSKL 529 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + L I NP+ D S MRT+ LP +L+ RN + +FE+ Y TP+ Sbjct: 530 RKPLVITNPLGEDTSVMRTTALPSMLEILARNYNNRNESARLFEIGKEYLPTTPDQLPLE 589 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFESGA 644 A + G G VD +D K VIE + + R+E Sbjct: 590 PARLTIGMYGGN----------------VDFYDLKG----VIEALMVQLKISDCRYERSG 629 Query: 645 -------PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 S +HPGRS ++ + + LG FGE HPN+ + +G+ G + Y + I Sbjct: 630 EDCPFDEKSAFHPGRSAVL-YAGDTPLGIFGELHPNVQNNYGI-----GVKTYAAKLNIP 683 Query: 698 QKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQ 754 + +V + L RDL+ + D IP L I K V +++ VT+FDV++ Sbjct: 684 EMLEHAATEVSYQPLPKYPATTRDLSLVCDDGIPVAQLEQAIRKAVGNILEKVTLFDVYK 743 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + +GKKSV+ + ++ T D+ M R+++ +K A LR Sbjct: 744 GQQIAQGKKSVSYSISMRSHDGTLTDEQADGAMKRVLK-ALKAMGAELR 791 >gi|218779649|ref|YP_002430967.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] gi|218761033|gb|ACL03499.1| Phenylalanyl-tRNA synthetase, beta subunit [Desulfatibacillum alkenivorans AK-01] Length = 801 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 231/809 (28%), Positives = 412/809 (50%), Gaps = 52/809 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M +L WL+ +++ D ++I LT GLEVE V +R A L + ++LS E D Sbjct: 1 MLVSLKWLQQYVNVDADPQEIAHALTMAGLEVEGVHDRFAHLQKVVVGEILSAEPVKKSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G Q +QVVCGAPN R GL A G+ P + M+++ K+ G S GM+ Sbjct: 61 HLQVCQVNAGG-QTLQVVCGAPNARAGLKAPLALQGAEFP-DGMVISKGKLMGQVSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL + ++ IMEL G L++ L LSD + ++ +TPNRSDC+ + G+A +L Sbjct: 119 CSEKELEVGANAGGIMELDDSLTPGQNLAEALNLSDTVFELGITPNRSDCLSMIGVAREL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A ++ + S P +++ D+ D C +A +KG++ +PNW+ Q L Sbjct: 179 AAIYGVEMTLPDASLPEEGDAVEDVTSVDILDPDHCPRYAARVIKGIKIGPSPNWLAQAL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDL 297 AVG+R IS +VD+TNYV ++ G P H FD + + + VR A GEK LD++E +L Sbjct: 239 LAVGIRPISNIVDVTNYVMMETGQPLHAFDYDLLEENRIVVRLAAKGEKFTTLDSKENEL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 D ++I + ++AG++GG ++ +DNTT+VL+E A + P+++ ++ K LG T++ Sbjct: 299 EDDMLMICDGKKAVALAGVMGGLNSEINDNTTNVLIESAHFSPMSVRKTAKRLGYHTEAS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKRLSG 416 +RFERG D +G++ + L++ GG + + A +T + +I S + G Sbjct: 359 HRFERGTDHEGVLFAAQRAAQLMMQTAGGVCAKGAVDAHPVTVEKVEITLSASRTNEILG 418 Query: 417 IDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 D+P + ++ LE + V + D +V P +R DV DL+EE+ R++G D I + Sbjct: 419 TDIPFDQIVKYLESVNMEVTPIDQDSMKVLAPVYRVDVSRPEDLMEEVARLFGYDNIPTT 478 Query: 476 -PLPLTQVEDK---RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQR 529 P ++ R+ L+ ++ L+ + E +N+SF+ + Q ++ + Sbjct: 479 WPAATMEIHPSDPIRDFGLK------LRTSLSGQGFREAINYSFVGADTPQRLMLAESDK 532 Query: 530 E---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L ILNP++ D + MRTSLLPGL + N++ D A+FE+ G+ + Sbjct: 533 RTQTLPILNPLTEDQAVMRTSLLPGLFASVAVNINYQNKDLALFEI----------GKTF 582 Query: 587 MAAGIRKGSSGIEG-----SGRLWSDKSEERCRFVDLFDAKADALSVIEPF--VSLDSLR 639 +A ++ + IE SG + + + D F+ K +++ F + + R Sbjct: 583 IAEKGQELPTEIESLCLVLSGAAAAPSWQSKAVRTDFFEMKGCCEALMADFHIENAEYSR 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE----VYLDSIP 695 E + + G+ I + V G G+ P +L F + + E L ++P Sbjct: 643 IEDDSAPYLVKGQCAQIVCQGQRV-GVLGKVKPEVLKGFEVKQDVFVAEFNAAALLAAVP 701 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 + + + RD+ ++D+ + A ++ ++ +D+ I + V V++ Sbjct: 702 DALTYQAPPR-------FPATDRDITIVLDKKVEAEAVLAHVRKMDQEWIRALEVVAVYE 754 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 G+ + EGKKS++ ++ + T +D ++ Sbjct: 755 GEPVPEGKKSLSFRITYRSDSTTLQDKEV 783 >gi|289168632|ref|YP_003446901.1| phenylalanyl-tRNA synthetase, beta chain [Streptococcus mitis B6] gi|288908199|emb|CBJ23041.1| phenylalanyl-tRNA synthetase, beta chain [Streptococcus mitis B6] Length = 801 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 248/828 (29%), Positives = 431/828 (52%), Gaps = 52/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKIMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFSLTETDQAAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--SDVLTVRRACSGEKIL 288 P W++ L G+R I+ +VD+TNY+ L G P H FD SD+ VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGSDI-RVRVARAGEKLV 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E DL +++VI + ++AG++GG+ + T+ V++E A+++ +I ++ Sbjct: 295 TLDGEERDLETNDLVITVADKPVALAGVMGGQATEISEKTSRVVLEAAVFNGKSIRKTSG 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFM 407 L + ++S RFE+G+++ + L S+I L G T + A + ++ Sbjct: 355 RLNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGSVSAGELDTSDVEVSST 414 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIY Sbjct: 415 LADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIY 474 Query: 468 GVDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 475 GYDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEF 529 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T Sbjct: 530 TAQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNP 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 KEELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTY 641 Query: 643 GAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS-- 697 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S Sbjct: 642 TATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAI 694 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQG 755 + V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G Sbjct: 695 EAALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSG 753 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 754 EKLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQVSLEEKVNAEVR 801 >gi|193215223|ref|YP_001996422.1| phenylalanyl-tRNA synthetase subunit beta [Chloroherpeton thalassium ATCC 35110] gi|193088700|gb|ACF13975.1| phenylalanyl-tRNA synthetase, beta subunit [Chloroherpeton thalassium ATCC 35110] Length = 807 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 414/831 (49%), Gaps = 50/831 (6%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 MK +L+WLK D +++ E++ LT++GLEVE V A S + K+L ++P+ Sbjct: 1 MKISLNWLKSFAPDLNLTSEELEQKLTALGLEVEGVQELCATFSNVVVGKLLETAKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIES 114 D + ++D G + +Q+VCGAPNV G A G+ + + + + KIRG S Sbjct: 61 DKLTVCQVDAGTGETLQIVCGAPNVAAGQTVAVALVGATLQTPSGDIIKIKKSKIRGETS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+E EL LSD+ I+ L P+G Y+ D I ++ +TPNR+D + GI Sbjct: 121 LGMICAEDELGLSDNHDGILVLDETYPIGEPFEKYVP-KDTIFEIGITPNRADALSHFGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A DL+ G+ + +++ P + + P + ++D C + +KGV +P W+ Sbjct: 180 ARDLI--GVDNVTDLD---PDALDFNPSTKRIVVEDPENCPIYTAVVIKGVNVAESPAWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RL+++GLR I+ +VDITNY+ G P H FD +R+S ++ E + LD +E Sbjct: 235 KERLQSIGLRPINNIVDITNYILHSLGQPLHAFDLNRLSGKCIQVKSNLSETFVTLDGKE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + P V+I + ++ G++GG+++ D T D+L+E A + P ++ ++ K LGI T Sbjct: 295 RQIEPGMVMICDAEKPVAVGGVMGGQNSEITDTTIDILLESAYFKPSSVRKTAKKLGIST 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YRFERGVD + + V LIL L GG+ ++ + ++ + I F + L Sbjct: 355 DSSYRFERGVDFGNVHFASEAAVHLILELAGGSVEEVAHVASGSFDEKLIAFRPARANAL 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGEY---DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G D+P E IL LGF G D E VPS+R DVE++ DL+EE+ R+YG D Sbjct: 415 LGADIPAEKMQDILMHLGFKKSGSQKSDDAIEYIVPSFRVDVEQEIDLIEEVARVYGYDN 474 Query: 472 IKSEPLPLTQVEDKRN------LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + V +K L+ +++ YV+ ++ E++ + ++ F Sbjct: 475 LA--------VTEKMTSAYPAVLNKKETFDDYVRNLMIGLNFKELLTNPLLKYSEAESF- 525 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + + LNPIS DM +R SL+P +LK RN+ + +FEV+H +E Sbjct: 526 -STQIVRTLNPISEDMEALRPSLIPSVLKVISRNIHYGNTEQRLFEVAHTFEKCAESAGA 584 Query: 586 YMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++ K + +G+ W+ S E D +D K +++ L+ +F Sbjct: 585 FVPGYNEKERLCLAVTGKREPLGWAQSSTE----TDFYDLKGAVEMLLQKLKLLEKSKFI 640 Query: 642 SGAPSWYHPGRSGIIKTSAE--IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + S + + A+ ++ G + NILD F + P+ E+ +D + S Sbjct: 641 TYNRSCLQLELTPVDGKKAQKPVIAGLLYQLEKNILDTFDIKQPVFVAELDMDVLKDSAG 700 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVF-----Q 754 TK +H RDLAF++ + + + +++ I +I V VFDV+ Q Sbjct: 701 FETKYSAPAKFPVVH---RDLAFLLPKQVKSQDVMSEIHACSEMIQSVNVFDVYEKNDKQ 757 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 ++ E K+S+A I T +++I L+D+IV V +K A LR + Sbjct: 758 DRAYNE-KRSIAFSFSIVCYTHTLAENEINALVDKIVTKVTQKFGAELRQA 807 >gi|148992309|ref|ZP_01822032.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP9-BS68] gi|147928935|gb|EDK79947.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP9-BS68] Length = 801 Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 243/824 (29%), Positives = 426/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ + DV +++ + +++ G+EVE V++ A LS + ++LS E P+ Sbjct: 1 MLVSYKWLKELVGIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEILSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II+ S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKKFADGIQILPENAVPGEEVFSYLDLDDEIIEFSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSHVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSVIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD++ ++ + +++ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVSLLLKAAVTHQEVIDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ KK NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEKKVNAEVR 801 >gi|29346036|ref|NP_809539.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides thetaiotaomicron VPI-5482] gi|41018345|sp|Q8AA39|SYFB_BACTN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29337930|gb|AAO75733.1| phenylalanyl-tRNA synthetase beta chain [Bacteroides thetaiotaomicron VPI-5482] Length = 820 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 249/835 (29%), Positives = 424/835 (50%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLDIEVVVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTLPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLSERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D G+I LK ++ L GGT S D+C+A P+ Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEIKDVCVAV-----PQD 415 Query: 404 IVFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLV 460 + S +V L G +P+E I+ L ++ E D ++VP +R DV+ D++ Sbjct: 416 FMVELSYEKVNSLIGKVIPVETIKSIVTSLEMKIMNETVDGLTLAVPPYRVDVQRDCDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 E+ILRIYG + ++ + + K V L E++N S + Sbjct: 476 EDILRIYGYNNVEIPTTLNSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLT---R 532 Query: 521 SVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Sbjct: 533 AAYYDGLENYSSNHLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNC 592 Query: 576 Y--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 Y + D +K +A G+ +G+ ++ +++ KA ++++ Sbjct: 593 YYFDADKKNPEKVLATYSEDYHLGLWVTGKKVANSWAHPDENSSVYELKAYVENILKRLG 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + L +L + + S + T L FG +L F + N EVY Sbjct: 653 LDLHNLVVGNLTDDIFATALS--VHTKGGKRLASFGVVTKKLLKAFDIDN-----EVYYA 705 Query: 693 SIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + K ++ K+ + +S VKRDLA ++D+++ + I + + +L+ +V Sbjct: 706 DLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEKKLLKEVE 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK++ GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 766 LFDVYEGKNIEAGKKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLNAKLR 820 >gi|291525120|emb|CBK90707.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Eubacterium rectale DSM 17629] Length = 806 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 252/831 (30%), Positives = 424/831 (51%), Gaps = 62/831 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLDCAIL 63 LSWLKD++D DV+ +++ + L S G EVE+ + + +S + V E P+ ++ Sbjct: 5 LSWLKDYVDIDVTPKELEEKLFSCGFEVEESYEVGKDISNVVVGLVEKCEPIPETHLSLC 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIP-ENNMIVNVRKIRGIES 114 +++ G H Q+ CGA NV+ G L+G V+A + E M + K+RG +S Sbjct: 65 QVNAGAHGTFQICCGADNVKAGGKYPLALIGATVYATAKDHVTIEGVMEIKQGKLRGYDS 124 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL L++D ++ LP DA G + L L D I D+++T NR DC Sbjct: 125 YGMLCSGVELGLNEDLYPGAGYNGLLVLPEDAKAGDDVKPILGLDDWIFDIAITANRPDC 184 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVR 226 + G+A + VAA LGK LKE + +++ + E K + +C + V V+ Sbjct: 185 QCIYGMARE-VAAVLGKELKEP--ATDYTADDVKKENFKVSVLAQDICPRYTAHYVHDVK 241 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 + +P WMR+RL VG+ SIS +VDITN+V + G P H FD S + D + VRRA GE Sbjct: 242 ISESPAWMRKRLALVGISSISNVVDITNFVLKELGQPMHAFDYSYLEGDEIVVRRANDGE 301 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI+ LD +E++L+ +N+VI + ++AGI+GG ++ +D TT+V+ E A + NI + Sbjct: 302 KIVTLDEKEFELNSNNLVICDGKKPVALAGIMGGLNSEINDGTTEVMFESAKFARDNIRK 361 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS-DICIARNITYKPRK 403 S + LG +DS + +GV+ +K + L+ L CG +S + + + +P++ Sbjct: 362 SSRALGQSSDSSALYSKGVNEYTTAIAMKRALHLMEELGCGKVSSTHVEVTTGNSLEPKE 421 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++V + GI+VP ED +RIL LGF+ + D+ + +P++R+D+E+ D+ EE+ Sbjct: 422 MKVSIAKVNGVLGIEVPTEDIVRILTNLGFAPVVSGDELTLMIPAYREDMEDYPDVAEEV 481 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R+YG D + +P QV L+L+Q R +K VL + E +++SF S L Sbjct: 482 IRMYGYDHVIPAFMPTAQVT-LGGLNLRQQTERKIKEVLCAAGAYEGIHYSFFSPADLDL 540 Query: 524 F-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + ++NPI+ D+S MRT+L +L A RN + I + IFE+ +++ Sbjct: 541 LRFPEDAPERHAIRLINPINVDLSLMRTTLASEMLYAIARNQKKGILEGRIFELGNIFIA 600 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + P+ ++ + AG+ + E L + ADAL V Sbjct: 601 KELPLTEYPDERETLCAGV--------------FGEDESFFTIKGLAETVADALDV---- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ + HP ++ + + V GY G+ I D + P + + LD Sbjct: 643 ----KFTYKPAQKPFLHPYQTAEVFCDGQKV-GYLGQVRYEICDELDMRVP--AYVMELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDV 752 +SQ K + +S KRD AF+VD+ I + N I+ + DVT+FDV Sbjct: 696 LRVLSQ-WYGKDRVFTPISKFDDEKRDFAFVVDKDITCEQIENGIREACDYVSDVTLFDV 754 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G L KKS+A V+ P + + + + I+ ++ + LR Sbjct: 755 YEGVQLPPNKKSMAYSVVFTPKDEELKTKKVEGFVKDILAHLKETAGITLR 805 >gi|301793780|emb|CBW36168.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV104] Length = 801 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 426/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ + DV +++ + +++ G+EVE V++ A LS + ++LS E P+ Sbjct: 1 MLVSYKWLKELVGIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEILSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKKFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSHVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ + + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYVLTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSVIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +++ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKAAVTHQEVIDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ KK NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEKKVNAEVR 801 >gi|169834362|ref|YP_001694066.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Hungary19A-6] gi|168996864|gb|ACA37476.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae Hungary19A-6] Length = 801 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 426/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQATEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSVIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|182439704|ref|YP_001827423.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces griseus subsp. griseus NBRC 13350] gi|62896310|emb|CAH94299.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptomyces griseus subsp. griseus] gi|178468220|dbj|BAG22740.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptomyces griseus subsp. griseus NBRC 13350] Length = 837 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 261/859 (30%), Positives = 423/859 (49%), Gaps = 76/859 (8%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE-- 53 M+ LSWL++++D T+ + + L S+GLEVE V+ A P + KVL++E Sbjct: 1 MRVPLSWLREYVDLPETETGRD-VQAKLVSVGLEVETVEQIGAGLKGPLVVGKVLTIEEL 59 Query: 54 ---RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + P C + TG+ QEI VCGA N VG V PG+ +P + + R Sbjct: 60 EGFKKPIRFCTVDVGTANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GDFAIAAR 116 Query: 108 KIRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 K G S GM+CS EL + DD + I+ LP + VG + L+L D ++D+++TP+R Sbjct: 117 KTYGKTSHGMICSTDELGMGDDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIAVTPDRG 176 Query: 167 DCIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + A L++ +++ P ++ P++I D C F V Sbjct: 177 YCLSLRGVARETATAYGLPLRDPALLDVPAP-NAYGYPVQIS----DPIGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G++ +P WM++RL+ G+R IS VDITNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLQPEARSPIWMQRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRNRVQGTIGVRRAT 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN------TTDVLVEVA 336 GEK+ LD L +++VI D +AG++GG + D TT+V++E A Sbjct: 292 QGEKLTTLDGTVRVLDAEDLVITDDRGPIGLAGVMGGANTEIADADGEHALTTEVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +D I+IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 HFDAISIARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEIT 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 PR I + R++G++ E +R L+ +G V G+ D+ V+VPSWR D+ E Sbjct: 412 APSAPRTIAMPANHPDRVAGVEYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLNEP 470 Query: 457 ADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S P P + R L+ +Q R + R LA +E +++ F Sbjct: 471 NDLAEEVIRLEGYENLPSTLPTPPS----GRGLTDRQRLHRRIGRALAGAGYVEALSYPF 526 Query: 516 ISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I G +R ++++NPIS + +RT+LLPGLL A RN R D A+F Sbjct: 527 IGDAVLDQLGLAADDARRRTVKLVNPISDEEPALRTTLLPGLLGALRRNDGRGSHDLALF 586 Query: 571 EVSHVYENDTPEGQKYMAA--GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK------ 622 E V+ P G++ A + + + E +G + + R V L A+ Sbjct: 587 ETGLVFR---PTGEETPAVRLPVDRRPTDEEIAGLNAALPRQPRRAAVVLAGAREQSGWW 643 Query: 623 --------ADALSVIEPFVSLD----SLRFESGAPSWYHPGRSGIIKTSA---EIVLGYF 667 ADA+ + ++R + AP +HPGR + S E + G+ Sbjct: 644 GKGTPATWADAVEAARSIAAEAGVEVTVRADQHAP--WHPGRCAALYVSVNGEETLFGHA 701 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ++ L C EV LD + ++ + +S+ +D+A +V Sbjct: 702 GELHPRVIKALHLPERTCAAEVELD---VLERAVDGALQAPRISTFPVATQDVALVVAGD 758 Query: 728 IPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 +PA + ++ L++ + +FDVF G+ +G G KS+A + + T ++ Sbjct: 759 VPAADVERALREGAGELLESLRLFDVFTGEQIGGGNKSLAYALRFRAADRTLTVEEASAA 818 Query: 787 MDRIVENVVKKTNAVLRSS 805 D V ++T AVLR + Sbjct: 819 RDSAVALAAERTGAVLRGA 837 >gi|312867291|ref|ZP_07727500.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] gi|311096992|gb|EFQ55227.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus parasanguinis F0405] Length = 801 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 423/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK +D DV E++ + +++ G+EVE V++ E LS + +VLS E P+ Sbjct: 1 MLVSYKWLKQLVDVDVPSEELAEKMSTTGIEVEGVESPAEGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLYDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D D + +A + V + Sbjct: 180 VAYE-VAAIYDKAVNFKEFTLTETDQAAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +N++ V++E A+++ +I ++ Sbjct: 296 LDGEERELETSDLVITVADKPVALAGVMGGEATEISENSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGFSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP T +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDK-----LPATLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T + Sbjct: 531 TAPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L V+ + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTPAVPVDFFYAKG-ILEVLFTRLGLEVTYTATQ 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ ++ + V+G G+ HP + + E Y+ + +S + Sbjct: 646 EIKSLHPGRTALLSLGDQ-VIGVLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL + +FDVF G+ LG Sbjct: 699 QPAAAFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-AIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|227824976|ref|ZP_03989808.1| phenylalanyl-tRNA synthetase subunit beta [Acidaminococcus sp. D21] gi|226905475|gb|EEH91393.1| phenylalanyl-tRNA synthetase subunit beta [Acidaminococcus sp. D21] Length = 811 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 260/838 (31%), Positives = 417/838 (49%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +++WLK +++ V+ E + D LT +GLEVE+V + E + KV+++ER+PD D Sbjct: 1 MLASINWLKKYVEIPVTPEVLADKLTRVGLEVEQVLHLGEGIEGVITGKVVTIERHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK +Q++ GA NV G + A GS +P N M + K+RG++S GM+ Sbjct: 61 HLWVCQMDLGKGDTVQILTGAQNVHQGDVVPVAQVGSHLP-NGMELKPVKMRGLDSNGML 119 Query: 119 CSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL +L + I LP D P+G + L L D ++D+ LT NR DC + Sbjct: 120 CSAGELGIDAKLLLPEQRDGIFILPADTPIGADIKAVLGLDDVVLDIDLTANRGDCFNML 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVA 230 G+A + AA LG + P S E P + +D + +C F + ++ + + Sbjct: 180 GLARE-CAAVLGTKLTLPDYAPESGEGTPASDRATVDIVATDVCSRFGLRMIENLEIKES 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P WM++ L+AV +R I+ +VD+TNYV ++ G P H +D +++ VRRA GE + Sbjct: 239 PEWMQKLLRAVNIRPINNVVDVTNYVMMELGQPMHAYDYDKVAGHHWVVRRAHEGEHLKT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q+ LSP+ +VI D + + GI+GG T V++E A ++ I R+ K Sbjct: 299 LDGQDRALSPEMIVIGDDEKGIGLGGIMGGFETEVTGATKTVMLEAATFNGPTIRRTSKA 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 LG+ +++ RFERGVD L + L+ + G A + + KP +I Sbjct: 359 LGLRSEASQRFERGVDTILNHNALNRAIYLLEEIGAGKAVHGVAECYPVPEKPVEIKAAP 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +++ G D+ ILE L F+V GE D + V+VP+WR+D + ADL EE+ R+ Sbjct: 419 TKLAARIGCDIDAATMKAILENLDFTVEEKGE-DSWVVTVPTWRKDCDCSADLSEEVARM 477 Query: 467 YGVDQIKSEPLPL-------TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 YG D+I+S+ L +ED +++ ++ L + EV+ +SF + + Sbjct: 478 YGYDKIESKTPELIMARGGQAPIEDVKDM---------IRDTLTGIGLDEVMTYSFYNAQ 528 Query: 520 QSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 G ++ L+I+NPIS D +RT+L P LL N R AIFEV Sbjct: 529 VFDNLGLPADDSRRKALQIINPISDDFRTIRTTLTPCLLSTVAYNQARQSERTAIFEVGR 588 Query: 575 VY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 V+ D PE + +A + + + W+ + +D +D K AL Sbjct: 589 VFIPKTLPLTDFPEEKMVLAIAMSGKRNPLS-----WNTAKDA----IDFYDIKG-ALEE 638 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + + L + + HPG+S I + V+G+ G HP + D FGLS E Sbjct: 639 VMDSLQVKGLSYGPTKEVFLHPGKSCAISYEGK-VIGFMGAIHPTVQDRFGLSA-----E 692 Query: 689 VYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLID 745 Y+ + I+ K + + H+ V RD+A +V + A L I K L+ Sbjct: 693 TYVLEVEIAPFVKSAEQIPQFEHVPQFPSVSRDIAVVVKAGVSASDLEAEIRKEGGALLV 752 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV +FDV+ GK + G KSVA + Q + T +D D+ ++ +IV NV K +LR Sbjct: 753 DVRIFDVYTGKQVKSGYKSVAFNLTFQDVSRTLQDKDVDDVIKQIVANVQDKFGGMLR 810 >gi|242373371|ref|ZP_04818945.1| Phe-tRNA synthetase beta chain [Staphylococcus epidermidis M23864:W1] gi|242348734|gb|EES40336.1| Phe-tRNA synthetase beta chain [Staphylococcus epidermidis M23864:W1] Length = 800 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 247/821 (30%), Positives = 421/821 (51%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D + S++ + + +T G+EV+ + D + + + V+S +PD D Sbjct: 1 MLISNEWLKDYVDVNQSVQDLAEKITRTGIEVDDIIDYTKDIKNLVVGYVVSKSPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEDEPVQIVCGAPNVDEGQYVIVAKVGGRLP-GGVKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S I P + G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKAFENGIFVFPTEVTPGTDALEALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A + + S SS S E+ + + ++ V V +P Sbjct: 180 GTAYEVAALYQTDMAKPQTSSQESSISAKDELSVSVKNEDKVPYYSARVVHDVTIAPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S ++ VR+A EK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVLLEYGQPLHMFDQDQIGSKMIEVRQANEDEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E L ++VI + ++ G++GG + D T +V+VE A++DP++I + + L Sbjct: 300 DVERQLLNTDIVITNGREPIALGGVMGGDFSEVTDQTRNVIVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + GT SD A ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLETYASGTVLSDRVSAGDLGSFVTPIEITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G + ED + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNQTIGFSLSDEDIVNIFEQLGFDTENKDGQLIVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ +L+ +Q +TR VK L + + + +S +SK+ + F R Sbjct: 480 NIPS-TLPVFDDVTSGSLTDRQYKTRTVKDTLEGAGLDQAITYSLVSKDHAKDFALQDRS 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L++A NV R D ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIEAVAYNVARKNTDVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + AK V E +L+F+ +G Sbjct: 599 YL-SGILTG----QYVNHAWQGKKET----VDFYLAKGVVDRVAEKL----NLKFDYRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ I+ + E + G+ GE HP + L FE+ D+I Sbjct: 646 KINGLHPGRTAIVSLNGEDI-GFIGELHPTLAADNDLKRTYV-FELNYDAIMNVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + V RD+A V+ +PA L++ I +N + +++D VFDV++G+ L EGK Sbjct: 704 YEPIPRFPG---VTRDIALEVNHEVPASELLSTIHENGEDILNDTLVFDVYEGEHLEEGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVAI++ ++T D+ + + D+I+E +++ A +R Sbjct: 761 KSVAIRLSYLDTENTLTDERVTAVHDKILE-ALQQQGATIR 800 >gi|238924343|ref|YP_002937859.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium rectale ATCC 33656] gi|238876018|gb|ACR75725.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium rectale ATCC 33656] Length = 806 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 251/831 (30%), Positives = 424/831 (51%), Gaps = 62/831 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLDCAIL 63 LSWLKD++D DV+ +++ + L S G EVE+ + + +S + V E P+ ++ Sbjct: 5 LSWLKDYVDIDVTPKELEEKLFSCGFEVEESYEVGKDISNVVVGLVEKCEPIPETHLSLC 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIP-ENNMIVNVRKIRGIES 114 +++ G H Q+ CGA NV+ G L+G V+A + E M + K+RG +S Sbjct: 65 QVNAGAHGTFQICCGADNVKAGGKYPLALIGATVYATAKDHVTIEGVMEIKQGKLRGYDS 124 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL L++D ++ LP DA G + L L D I D+++T NR DC Sbjct: 125 YGMLCSGVELGLNEDLYPGAGYNGLLVLPEDAKAGDDVKPILGLDDWIFDIAITANRPDC 184 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVR 226 + G+A + VAA LGK LKE + +++ + E K + +C + V V+ Sbjct: 185 QCIYGMARE-VAAVLGKELKEPALD--YTADDVKKENFKVSVLAQDICPRYTAHYVHDVK 241 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 + +P WMR+RL VG+ SIS +VDITN+V + G P H FD S + D + VRRA GE Sbjct: 242 ISESPAWMRKRLALVGIGSISNVVDITNFVLKELGQPMHAFDYSYLEGDEIVVRRANDGE 301 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI+ LD +E++L+ +N+VI + ++AGI+GG ++ +D TT+V+ E A + NI + Sbjct: 302 KIVTLDEKEFELNSNNLVICDGKKPVALAGIMGGLNSEINDGTTEVMFESAKFARDNIRK 361 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS-DICIARNITYKPRK 403 S + LG +DS + +GV+ +K + L+ L CG +S + + + +P++ Sbjct: 362 SSRALGQSSDSSALYSKGVNEYTTAMAMKRALHLMEELGCGKVSSTHVEVTTGNSLEPKE 421 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++V + GI+VP ED +RIL LGF+ + D+ + +P++R+D+E+ D+ EE+ Sbjct: 422 MKVSIAKVNGVLGIEVPTEDIVRILTNLGFAPVVSGDELTLMIPAYREDMEDYPDVAEEV 481 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R+YG D + +P QV L+L+Q R +K VL + E +++SF S L Sbjct: 482 IRMYGYDHVIPAFMPTAQVT-LGGLNLRQQTERKIKEVLCAAGAYEGIHYSFFSPADLDL 540 Query: 524 F-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + ++NPI+ D+S MRT+L +L A RN + I + IFE+ +++ Sbjct: 541 LRFPEDAPERHAIRLINPINVDLSLMRTTLASEMLYAIARNQKKGILEGRIFELGNIFIA 600 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + P+ ++ + AG+ + E L + ADAL V Sbjct: 601 KELPLTEYPDERETLCAGV--------------FGEDESFFTIKGLAETVADALDV---- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ + HP ++ + + + GY G+ I D + P + + LD Sbjct: 643 ----KFTYKPAQKPFLHPYQTAEVFCDGQKI-GYLGQVRYEICDELDMRVP--AYVMELD 695 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDV 752 +SQ K + +S KRD AF+VD+ I + N I+ + DVT+FDV Sbjct: 696 LRVLSQ-WYGKDRVFTPISKFDDEKRDFAFVVDKDITCEQIENGIREACDYVSDVTLFDV 754 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G L KKS+A V+ P + + + + I+ ++ + LR Sbjct: 755 YEGVQLPPNKKSMAYSVVFTPKDEELKTKKVEGFVKDILAHLKETAGITLR 805 >gi|295706826|ref|YP_003599901.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus megaterium DSM 319] gi|294804485|gb|ADF41551.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus megaterium DSM 319] Length = 804 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 246/825 (29%), Positives = 414/825 (50%), Gaps = 42/825 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D + V E++ D +T G+EVE V+N + +S I V+ E++P+ Sbjct: 1 MFVSYRWLQEYVDLSGVRAEELADKITKSGIEVEGVENLNKGISGVVIGHVVEREQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G + +Q+VCGAPNV G A G+ +P N + K+RG ES GM Sbjct: 61 DKLSRCQVDLGGGEIVQIVCGAPNVAQGQKVAVAKVGAVLP-GNFKIKRAKLRGEESNGM 119 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS E +L+ D I P DA VG D L L+D ++++ LTPNRSDC+ + Sbjct: 120 ICSLQELGIESKLVAKDYQEGIFVFPSDAEVGADALDALNLNDEVLELGLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K +++ S E I ++ + VK V+ +P Sbjct: 180 LGVAHEVAAILRREVKYPSVNVQTSDEQAADYISVKVEAKEDNPLYVARVVKNVKIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VR A GEK + L Sbjct: 240 LWMQTRLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRHASEGEKFVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L + +VI + ++AG++GG ++ D+T +VL+E A + + + ++ K+ Sbjct: 300 DDQERVLKDNQLVITNGSEPVALAGVMGGANSEVKDDTVNVLIESAYFKGLTVRQASKDH 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNS 409 G+ +++ RFE+G+D L+ G S +T +P + Sbjct: 360 GLRSEASARFEKGIDPNRTRVAADRAAELMAEYASGEVVSGTVEVDTLTVEPAVVAVSLG 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G ++ +E+ I+ RL F E + V+VP+ R D+ + D+VEE+ R+YG Sbjct: 420 RINDVLGTELSMEEVQDIMNRLQFENKVEDETIVVTVPTRRGDITIEEDIVEEVARMYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQ 528 D + + LP+T V + L+ Q R V+R L + + +S S E++ F Sbjct: 480 DNLPT-TLPVT-VANPGKLTEYQLGRRKVRRFLEGAGLAQTTTYSLTSAEKATQFALNAT 537 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 + + P+S D S +R SL+P LL+A N R A++E V+ E + P+ Q Sbjct: 538 STIGLAMPMSEDRSILRQSLVPHLLEAVKHNNARQSDSIALYETGSVFLSKGEGELPDEQ 597 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESG 643 + +A I +G + + + VD + K V+E F L + S Sbjct: 598 ERVAGAI---------TGLWHAHGWQGEKKVVDFYVIKG----VLEGVFAQLGLEKRISY 644 Query: 644 AP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 AP HPGR+ + E +GY G+ HP +GL FE++L + + + Sbjct: 645 APVKKDGMHPGRTAAVWLD-EKEIGYVGQVHPVAQKQYGLRETYV-FELHLQELLAADVE 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 + + S + RD+A +VD+++ AG + +I L+ DVTVFD+++G+ + Sbjct: 703 EVRYSAIPRFPS---ITRDIALVVDKNVLAGEVQRVIYTTGGELLKDVTVFDLYEGERME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EGKKSVA + + T D+++ ++E V K+ A LRS Sbjct: 760 EGKKSVAFSLRYLDPERTLTDEEVAKAHGAVLEAVEKEFGATLRS 804 >gi|260892442|ref|YP_003238539.1| phenylalanyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] gi|260864583|gb|ACX51689.1| phenylalanyl-tRNA synthetase, beta subunit [Ammonifex degensii KC4] Length = 780 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 248/807 (30%), Positives = 409/807 (50%), Gaps = 54/807 (6%) Query: 19 EKICDTLTSIGLEVEKVDNREALSPFTI-------VKVLSVERNPDLD-CAILRIDTGKH 70 + + + LT++G+ V+ V+ PF + ++L V +P+ D I + DTG Sbjct: 7 QALAERLTAVGVAVDTVE------PFGMGIEGVVTARLLEVSPHPNADRLRICQADTGS- 59 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +VV GA NV G + A G+ + N ++ + RG+ S GM+CSE+EL L + S Sbjct: 60 EVYEVVTGADNVFPGAVVPLALVGARL-ANGQVIKKARFRGVTSNGMLCSEEELGLEERS 118 Query: 131 ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEIN 190 A IM LP D P+G + L L D ++++ LTPNR DC+ + G+A ++ + +LKE Sbjct: 119 AGIMILPPDTPIGEDIRKLLGLPDWVLNLDLTPNRGDCLSIFGVAREVASIYGVELKEPP 178 Query: 191 ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALV 250 + + EI+ +++ LC + K V+ +P WM+ RL+A G+R I+ +V Sbjct: 179 VLEKGEAGEE--EIEVEIEAPELCGRYLARLFKEVKIGPSPLWMQTRLRAAGMRPINNVV 236 Query: 251 DITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 D+TNYV L+ G P H FD + I + VRRA GE+++ LD L P+N+VIA R Sbjct: 237 DVTNYVMLELGQPLHAFDYTTIRGKRIVVRRARPGEELVLLDGSLLRLGPENLVIADAER 296 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGM 369 ++AGI+GG+ D+TT VL+E A +DP+NI R+ K+ G+ T++ RFERGVD++G+ Sbjct: 297 AVALAGIMGGRDTEIKDDTTTVLLEAARFDPLNIRRTAKSFGLRTEASLRFERGVDIEGV 356 Query: 370 IPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRIL 428 L+ + G A + + R + + + + + E V+ + G P + L Sbjct: 357 RRAADRTAYLVEKIGAGRALSLVVDRYVAKRLYRTILVRPEKVEAILGTSFPYREVADKL 416 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 RLGF + + + V VPS+R DV + D+VEEI R+YG D+I P T E + Sbjct: 417 RRLGFQLEESEEGWRVYVPSFRHDVALEEDMVEEIARVYGYDRI-----PTTLPEGETTP 471 Query: 489 SLQQSRTRYVKR---VLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMR 545 Q + +V+R +L + EV+ +SFI+ G L++ NP+S + + +R Sbjct: 472 GKQPAERAFVRRLKSLLTGFGLSEVITYSFINPRDLQRLGVELEALKLRNPLSEEQAVLR 531 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSG 602 T+LLPGL+ RN + ++FEV V+ N P+ + + G + + S Sbjct: 532 TTLLPGLVGVLARNAAHRVKGLSVFEVGRVFLPGSNTLPDERLML------GLAAMGTSP 585 Query: 603 RLWSDKSEERCRFVDL---FDAKADALSVIE-PFVSLDSLRFESGAPSWYHPGRSGIIKT 658 R W S F L +A AL + FV LDS P+ HPGR+ ++ Sbjct: 586 RHWLTPSPIPYDFFYLKGVVEALCRALGIKGVSFVPLDS------HPAL-HPGRAARLEV 638 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + LG+ GE HP + + + L + +Q K + + V R Sbjct: 639 GGQ-ELGFLGELHPRLQEDYDLPA-RAVVAELAVAALFAQAKPPAFRPLPRYPG---VAR 693 Query: 719 DLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 DL+F+V Q IP + I + +L+ ++ +FDV+ G L G +S+A + Q T Sbjct: 694 DLSFVVRQEIPVAVVEAKIREAAGKLLKELELFDVYVGPHLPPGTRSLAFGLFFQAEDRT 753 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 ++++ +++IV + + A LR Sbjct: 754 LTEEEVNERVEKIVRRLREDLGAELRG 780 >gi|325570412|ref|ZP_08146189.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] gi|325156622|gb|EGC68799.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus casseliflavus ATCC 12755] Length = 806 Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 231/820 (28%), Positives = 428/820 (52%), Gaps = 31/820 (3%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++LD ++++ +++ D ++ G+EVE +D E L + +V +PD Sbjct: 1 MLVSYKWLNEYLDLSEITPKELADKMSVTGIEVEGIDVPEEGLKKIVVGEVTDCRPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I +++ G+ ++ Q+VCGAPNV+ G+ + A PGS I N+ + K+RG S GM Sbjct: 61 DHLSICQVNIGEDEDSQIVCGAPNVKSGIKVIVALPGSRIA-GNVKIKKGKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL +D + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQELGYADSVIPKEYAEGIYYLPAEAEPGLPVFPYLDMDDHIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A K I+ S + +I+ + +++ + + + GV +P Sbjct: 180 RGVAYEVGAIYRQTPKFPEIALTESEVAAADKIQVKVTEATDAPAYQIRIIDGVTIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRR E ++ L Sbjct: 240 QWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRGKENESLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + LSP+++VI + ++AG++GG + + TT V +E AL+DP+ I + K Sbjct: 300 DGETRQLSPEDIVITNGTTPVALAGVMGGLDSEITETTTTVALEAALFDPLAIRLTSKKF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G++ + +LI L GGT + I + +P ++ + Sbjct: 360 NLRSESSARFEKGINQATVAKACDAAAALIAELAGGTVLKEAVIGSQVAVEPVEVAITLA 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G ++ E+ I + LGF E D + VSVP R D+ +AD++EE+ RIYG Sbjct: 420 RINSYLGTEITDEEVQEIFDALGFGHRQEADSYIVSVPPRRWDITIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ P L Q E +L+ Q TR V+ +L + E ++++ ++E++ F Sbjct: 480 DRL---PSTLPQGETVAGHLTKAQRLTREVRTLLEGNGVSEAISYALTTEEKAQQFTDKS 536 Query: 529 RELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ L+ P++ + + +R +L+ GLL N+ R A++E+ V+ G Sbjct: 537 SQVTRLDWPMTEERAVLRLNLISGLLDDVAYNLARKNNRVALYEIGRVFYQT---GDSKH 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP-S 646 G+ +G + + + + VD F K ++ + D +R++ A Sbjct: 594 ELPTEVNHLGLALTGNIHEKDWQTQAQKVDFFHLKGILENLFDSLALTDRIRYQKTADIK 653 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ +I ++ +G+ G+ HP+I + +S E Y+ + + Q KT++ Sbjct: 654 EMHPGRTAMILLD-DLEIGFLGQVHPSIAKAYEVS------ETYVAELNLDQLLAAKTEQ 706 Query: 707 VVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 +V+ +S V RD+A ++D+ I +++ II+ + R + D+ +FDV+QGK++ GKK Sbjct: 707 LVYQPVSKFPSVTRDMALLLDETIDNQSVMEIIRESAGRFLSDIRLFDVYQGKNIEAGKK 766 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+ + + T D++I + +I N+ + A +R Sbjct: 767 SLGYSLTFSNPEATLTDEEINQAIAKITRNLEENVQAEIR 806 >gi|15900491|ref|NP_345095.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae TIGR4] gi|111657674|ref|ZP_01408403.1| hypothetical protein SpneT_02001130 [Streptococcus pneumoniae TIGR4] gi|30316273|sp|Q97S34|SYFB_STRPN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|14972056|gb|AAK74735.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae TIGR4] Length = 801 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 248/827 (29%), Positives = 428/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +I+ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQINVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQATEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVIQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIVSLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 701 RTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 GALQPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|295839842|ref|ZP_06826775.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. SPB74] gi|197698682|gb|EDY45615.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. SPB74] Length = 836 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 265/868 (30%), Positives = 418/868 (48%), Gaps = 95/868 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGQVRAIEELE 60 Query: 54 --RNPDLDCAILRID---TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D TG+ QEI VCGA N VG V PG+ +P + + RK Sbjct: 61 GFKKPIRFCHVDVGDANGTGESQEI--VCGARNFAVGDKVVVVLPGAVLP-GDFAIAARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP VG + LEL D ++D+++TP+R Sbjct: 118 TYGKTSHGMICSADELGMGDDGTHGIIVLPPQYEVGTDAIELLELVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RGIA + +A GL L++ I++ P ++ P+EI D C F V Sbjct: 178 CLSMRGIARETAIAYGL-PLRDPALIDVPGP-NAHGHPVEIA----DPFGCDRFTARTVA 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ P WM +R++ G+R +S VDITNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLDPEARTPIWMARRIQKAGMRPVSLTVDITNYVMLELGQPLHAYDRARVRGPIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA-----GCDDNTTDVLVEVAL 337 +GEK+ LD Q L P+++VI + +AG++GG G + T +V+VE A Sbjct: 292 AGEKLKTLDGQTRTLDPEDLVITDERGPIGLAGVMGGAETEIADHGAELGTNEVVVEAAH 351 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 +D I IAR+ + + +++ RFERGVD Q + V L++ L GGTA + Sbjct: 352 FDQITIARASRRHKLASEASRRFERGVDPQAASAAAQRTVDLLVLLAGGTADAGVTEVSA 411 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 PR + R++G+ E +R L+++G V G+ D+ V+VPSWR D+ Sbjct: 412 PSAPRTVTMPAGHPDRVAGVAYGRETVVRRLQQVGCDVYGQ-DELIVTVPSWRPDLTAPN 470 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DL EE++R+ G + + P L + R L+ +Q R V R LA R +E +++ F+ Sbjct: 471 DLAEEVIRLEGYENL---PATLPRPPAGRGLTERQRFHRRVGRALAGRGYVEALSYPFLG 527 Query: 518 KEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE- 571 + G +R + ++NP+S + +RT+LLPGLL A RN R D A+FE Sbjct: 528 TDAFDALGLAEDDPARRVVRLVNPLSDEEPALRTTLLPGLLAALRRNEGRGAHDLALFES 587 Query: 572 -----------------VSHVYENDT--------PEGQKYMA---AGIRKGSSGIEGSGR 603 V+H E+ PE +++A AG R+ SG G GR Sbjct: 588 GLVFHPRAEAAVPERLPVAHRPEDTQLDALDAALPEQPRHLAVVLAGARE-QSGWWGKGR 646 Query: 604 L--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT--- 658 W+D + + L GA +HPGR + Sbjct: 647 PSDWADAI---------------EAARTAAAEAGADLVVRKGAYGPWHPGRCAELVAFVD 691 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 AE V+G+ GE HP ++ GL C E+ LD++ ++ + +S+ + Sbjct: 692 GAERVIGHAGELHPRVIKALGLPARTCASELDLDAL---ERAGAGAAQAPRISNYPVATQ 748 Query: 719 DLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +V +PA + + + + L++ + +FDV+ G L EG KS+A + + T Sbjct: 749 DVALVVPADVPAAEVESALSEGAGELLESLRLFDVYTGDQLAEGHKSLAYALRFRAADRT 808 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRSS 805 ++ D V + T AVLR + Sbjct: 809 LTVEEATAARDAAVARAAEHTGAVLRGA 836 >gi|322377129|ref|ZP_08051621.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] gi|321281842|gb|EFX58850.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. M334] Length = 801 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 249/828 (30%), Positives = 429/828 (51%), Gaps = 52/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ +A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPDAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEATRQIVCGAPNVRSGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +S + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLSETDQAAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--SDVLTVRRACSGEKIL 288 P W++ L G+R I+ +VD+TNY+ L G P H FD SD+ VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGSDI-RVREARAGEKLV 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 TLDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSG 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFM 407 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 355 RLNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSST 414 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIY Sbjct: 415 LADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIY 474 Query: 468 GVDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 475 GYDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEF 529 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T Sbjct: 530 TAQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNP 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 KEELPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTY 641 Query: 643 GAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS-- 697 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S Sbjct: 642 TATSEIPSLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAI 694 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQG 755 + V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G Sbjct: 695 ETALQPANPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSG 753 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 754 EKLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|322387293|ref|ZP_08060903.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] gi|321141822|gb|EFX37317.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus infantis ATCC 700779] Length = 801 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 245/824 (29%), Positives = 425/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVLKEFADGIQILPDEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETDQAAADALSVNIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARTGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ + +T V++E A+++ +I ++ Sbjct: 296 LDGEERELETTDLVITVADKPVALAGVMGGQATEISEKSTRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAEAFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T + Sbjct: 531 TAPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLEVTYTATQ 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I +I LG+ G+ HP + + E Y+ + +S +K Sbjct: 646 EIKSLHPGRTALISLGDQI-LGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEKAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + V ++ V RD+A ++ + +V+ I+ V RL + +FDVF G+ LG Sbjct: 699 QPSAAFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-GIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|302346684|ref|YP_003814982.1| phenylalanine--tRNA ligase, beta subunit [Prevotella melaninogenica ATCC 25845] gi|302151008|gb|ADK97269.1| phenylalanine--tRNA ligase, beta subunit [Prevotella melaninogenica ATCC 25845] Length = 822 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 256/839 (30%), Positives = 413/839 (49%), Gaps = 53/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D ++S E+I LTSIGLEV +D R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFNLSPEEIAVALTSIGLEVGSLDEVETIRGGLKGLYVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + +N + K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDNEFTIKRSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG S+Y +L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGVGTAHDGIIVLPEDAPVGQPASEYYQLDSDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A E ++ P ++ L I ++++ C+ +A + Sbjct: 181 GVARDLYAWLTQNGYETSLHRPSCDAFKVDNHDLPIDVTIENTDACRRYACLSITDCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G+K Sbjct: 241 ESPQWLKDKLNIIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKDKNEGKKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ L ++ I ++ IAG+ GGK +G + T +V++E A + P I +S Sbjct: 301 VTLDGEEHILGEHDLAICNEEDPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG+D G+I LK L L GG S T V + Sbjct: 361 RRHGLSTDASFRFERGIDPNGVIYALKQAAILCKELAGGKVSMEIRDEYPTKMEGFPVRL 420 Query: 408 NSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILR 465 N E RL G + E RI E L V E + + VP +R DV+ D+VE+ILR Sbjct: 421 NYEYCDRLIGKKLGNETIKRIAESLEMKVEKEDAEGLNLLVPPYRVDVQRPCDVVEDILR 480 Query: 466 IYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--- 517 IYG + ++ L + + DK R + L E++N S Sbjct: 481 IYGYNNVEIPTELKSSLTIAEEADK-----NYHRENIIGEQLVGAGFSEIMNNSLTKSSY 535 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 +E + + ++++NP+SAD+ MR +LL G L++ RNV+R + FEV +VY Sbjct: 536 YEETGLNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVGNVY 595 Query: 577 E-------NDTP---EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 + ++P Q Y A G ++GS W+ EE ++ KA Sbjct: 596 KFNKEKWSEESPVKAYSQDYHMALWVTGKR-VQGS---WAHPDEEST----FYELKAYVE 647 Query: 627 SVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +++ ++ L E + + ++ ++KT VL G +L F + + Sbjct: 648 NILRRIGIAQGLLVSEKSDNNVFD--KAIVLKTRTGKVLVEMGILSHKLLKSFNIDQKV- 704 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 + LD + + R + +S V RDLA +VD ++ + I + D +L+ Sbjct: 705 -YYAELDWAGLMKAIRKNKLQFQEISKYPAVSRDLALLVDNNVEFAQIEEISRQADKKLL 763 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A LR Sbjct: 764 KRVELFDVYQGKNLPEGKKSYAVNFILQDESKTLNDKAIDAIMQKLIKNLTNKLGAELR 822 >gi|325279556|ref|YP_004252098.1| Phenylalanyl-tRNA synthetase beta chain [Odoribacter splanchnicus DSM 20712] gi|324311365|gb|ADY31918.1| Phenylalanyl-tRNA synthetase beta chain [Odoribacter splanchnicus DSM 20712] Length = 815 Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 253/837 (30%), Positives = 422/837 (50%), Gaps = 56/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV---EKVDN-REALSPFTIVKVLSVERNP 56 M +L+WLK++L D+S+EK+C+ LTSIGLEV EK ++ R L I +V + E +P Sbjct: 1 MNISLNWLKEYLKIDLSVEKVCEILTSIGLEVGGYEKFESIRGGLRGLVIGEVKTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 D D + +D G + +VCGAPNV G V A G+ + + + ++K IRG E Sbjct: 61 DSDHLHLTTVDLGDGRLTPIVCGAPNVAAGQKVVVATIGTVLYDGDKEFTIKKSKIRGQE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DA VG ++Y ++ D I++ +TPNR D Sbjct: 121 SEGMICAEDEIGIGHDHAGIIVLPSDARVGMPAAEYYHITTDYTIEIDITPNRVDGASHL 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL AA L + +EI+ + P +++S I ++ C +A C++GV+ Sbjct: 181 GVARDL-AAYLQQTQEIHYTLPSVAHFAADSNTAGISIEVQRPEACPRYAGVCIEGVKVQ 239 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ RLKA+GL I+ +VDITN++ + G P H FD +I + + VR +G + Sbjct: 240 ESPEWLQTRLKAIGLHPINNVVDITNFILFELGQPLHSFDKDKIKGNKVIVRSFPTGTRF 299 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E +L+ +++++ + IAG+ GG +G + TT+V +E A +DP+ + ++ Sbjct: 300 TTLDGVERELNENDLMVCNTEEPMCIAGVFGGLESGITEATTNVFLESACFDPVFVRKTA 359 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG D +I LK LI L GG + + I P + Sbjct: 360 RRHGLNTDASFRFERGTDPNIVIYALKRAALLIKELGGGKIT----SEIIDIYPNPVADF 415 Query: 408 NSEVK-----RLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVE 461 EVK RL G + + +IL L ++ E + + +P +R DV +AD++E Sbjct: 416 EVEVKYAHIDRLIGKKIGQDTIKKILNALEIKIVKEDTEGLSLQIPPYRVDVRREADVIE 475 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR-------TRYVKRVLASRAMMEVVNWS 514 +ILRIYG + I +V K N +L S + +LA+ E++N S Sbjct: 476 DILRIYGFNNI--------EVPAKVNSTLSYSEKPDDFQLKNKIADLLAANGFNEIMNNS 527 Query: 515 FI--SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 S + + + + + NP+S+D+S MR SLL G L+ N++R ++ +FE Sbjct: 528 LTKASYYEHLETYRPEETVMLFNPLSSDLSAMRQSLLFGGLETIAYNINRKNSNLRLFEF 587 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSG----RLWSDKSEERCRFVDLFDAKADA-LS 627 Y EG+ ++ + + +G W+ K ++ D F+ K+ A + Sbjct: 588 GKAYTFHKKEGENHLKQYKEEDKLALFITGDKIQASWNSKEQK----TDFFNLKSYAEMI 643 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +I + L E + Y R GI T + G +L + + Sbjct: 644 LIRLGFKTEILTLEECSADIY---REGISYTQNGKHIVTIGMLSHKVLKPNDIEQEVYYA 700 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDD 746 E ++I + K T T + VKRDLA ++D+ I + +I + +L+ Sbjct: 701 EFSWENILKAIKNHTIT--FTPMPKFPAVKRDLALLLDKKISFKEVRDIAFRTEKKLLKS 758 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VT+FDV++G+ LG GKKS AI +Q + T D I +M++++ + +A +R Sbjct: 759 VTLFDVYEGEKLGAGKKSYAISFTLQDDEKTLTDKQIDKIMNKLMGTYKHQLSAEIR 815 >gi|298385339|ref|ZP_06994897.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 1_1_14] gi|298261480|gb|EFI04346.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 1_1_14] Length = 820 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 248/835 (29%), Positives = 424/835 (50%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLDIEVVVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTLPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D G+I LK ++ L GGT S D+C+A P+ Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEIKDVCVA-----APQD 415 Query: 404 IVFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLV 460 + S +V L G +P+E I+ L ++ E D ++VP +R DV+ D++ Sbjct: 416 FMVELSYEKVNSLIGKVIPVETIKSIVTSLEMKIMNETVDGLTLAVPPYRVDVQRDCDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 E+ILRIYG + ++ + + K V L E++N S + Sbjct: 476 EDILRIYGYNNVEIPTTLNSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLT---R 532 Query: 521 SVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Sbjct: 533 AAYYDGLENYSSNHLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNC 592 Query: 576 Y--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 Y + D +K +A G+ +G+ ++ +++ KA ++++ Sbjct: 593 YYFDADKKNPEKVLATYSEDYHLGLWVTGKKVANSWAHPDENSSVYELKAYVENILKRLG 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + L +L + + S + T L FG +L F + N EVY Sbjct: 653 LDLHNLVVGNLTDDIFATALS--VHTKGGKRLASFGVVTKKLLKAFDIDN-----EVYYA 705 Query: 693 SIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + K ++ K+ + +S VKRDLA ++D+++ + I + + +L+ +V Sbjct: 706 DLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEKKLLKEVE 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK++ GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 766 LFDVYEGKNIEAGKKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLNAKLR 820 >gi|332204604|gb|EGJ18669.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47901] Length = 801 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 245/824 (29%), Positives = 427/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ + DV +++ + +++ G+EVE V++ A LS + ++LS E P+ Sbjct: 1 MLVSYKWLKELVGIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEILSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKKFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSHVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ + + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYVLTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSVIEAAL 698 Query: 704 TKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V V ++ V RD+A ++ + +++ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAVPFVEITKFPAVSRDVALLLKAAVTHQEVIDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ KK NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEKKVNAEVR 801 >gi|108804145|ref|YP_644082.1| phenylalanyl-tRNA synthetase subunit beta [Rubrobacter xylanophilus DSM 9941] gi|108765388|gb|ABG04270.1| phenylalanyl-tRNA synthetase beta subunit [Rubrobacter xylanophilus DSM 9941] Length = 810 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 260/828 (31%), Positives = 414/828 (50%), Gaps = 41/828 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ LSWL++++D + + E++ + + EVE + L +V +V R+P+ D Sbjct: 1 MRVPLSWLREYVDFEQTPEELVELFSMHSQEVEGIHRLGVLDGEVVVGEVREFGRHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA N R G PGS + + R +RG+ES GMM Sbjct: 61 RLFVAKVDIGG-RTVQIVAGAGNPRPGARVPVVLPGSTLAGVGKVRKAR-LRGLESYGMM 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL +S D I+ L VG LSDYL + + ++D+ + PNR D G+ G+A +L Sbjct: 119 MSERELGISGDHEGILLLDEGYEVGRPLSDYLPVGETVLDIDVMPNRPDLWGMIGVAREL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 A + +S E ++ LC + + V GVR + +P +R+R Sbjct: 179 AAILRTGFRIPRVSFEAGGEPT-AAYGLRVEAGELCPRYDLRRVSGVRPGLRSPLLVRRR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 + A G+R I+A+VD TNYV L+ G P H FDA+++ + VRRA GEKI LD L Sbjct: 238 IYAAGMRPINAVVDATNYVMLETGQPIHAFDAAKVRGGIVVRRAREGEKITLLDGSVRTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P+ +VIA + R IAG++G + A DD T+DVL+EVA ++ NI ++ LG+ TD+ Sbjct: 298 DPEMLVIADEERALVIAGVMGAEDAEVDDGTSDVLIEVATFEGRNILKTSARLGLRTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFMNSEVKRLSG 416 RFERG+D + L+ +V +++ GG A+ D +P ++ L G Sbjct: 358 GRFERGLDPNMVDYALQRVVGMLVEHTGGRAAPDTLSHYPRPARPWRVELRLERAGLLLG 417 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + V ++ +L LG V V+VP++RQD+ +ADLVEE+ R+ G++++ E Sbjct: 418 MPVREGEAREVLGALGCEVAPGERGLAVTVPTFRQDLRREADLVEELGRLIGLERV-PEH 476 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 LP T + L+ Q R R ++R+LA + E + + F + G G L + NP Sbjct: 477 LPATALPG--GLTADQRRVRLLRRLLADLGLSEAMLYPFGPDRWARDLGYGGSPLRVENP 534 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAGIR 592 +SA+ +R S+LPGLL A RN + IFEV HV+ D +++ AG R Sbjct: 535 LSAEGRCLRVSMLPGLLDAAARNRAFGASGGGIFEVGHVFLPVPVADGEAARRFREAGER 594 Query: 593 KGSSGIEGSGRLWSDKSEERCRFV-------------DLFDAKADALSVIEPFVSLDSLR 639 G G L + E R + L +A ++E V Sbjct: 595 PGGVG---EPELTGVREEPRLGVLLAGVVRPGGWNVPALRAGFFEARGLVERLVP--GAA 649 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN-PICGFEVYLDSIPISQ 698 FE G + HPGRS + V G+ GE HP + + F L P+ E+ L + Sbjct: 650 FEPGGEPFLHPGRSARVVVEGRRV-GWVGELHPEVAERFELEGWPVAALELELAACKPDP 708 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 + R + ++ V RDLA +VD +PAG ++ I+ + L+ VFDV+ G+ Sbjct: 709 EPRFRP-----FFNVPAVNRDLAVVVDASVPAGGMLEDIRALGGPLLAGARVFDVYTGEQ 763 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + EGKKSVA + Q + T D+++ ++RI + ++ A +R Sbjct: 764 VPEGKKSVAFSLTFQADR-TLTDEEVDAEVERIAARLNERFGAEVRGG 810 >gi|327314512|ref|YP_004329949.1| phenylalanine--tRNA ligase subunit beta [Prevotella denticola F0289] gi|326945570|gb|AEA21455.1| phenylalanine--tRNA ligase, beta subunit [Prevotella denticola F0289] Length = 822 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 257/842 (30%), Positives = 418/842 (49%), Gaps = 59/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D D++ ++ D LTS GLEV+ +D R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFDLTPQETADALTSTGLEVDALDEVETIRGGLKGLFVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + + + ++K +RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDKEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYHLDSDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + + +P+++ ++++ C+ +A + Sbjct: 181 GVARDLYAWLTQNGYKTSLHRPDCSAFRVDNHDLPVDVT--IENTDACRRYACLSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L VGLR I+ +VDITNY+ + G P H FDA + + V+ G+ Sbjct: 239 VKESPKWLKDKLNVVGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKDKNEGK 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLAICNAEEPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TD+ +RFERG+D G + LK L L GG S T V Sbjct: 359 SARRHGLSTDASFRFERGIDPNGTVYALKQAAILCKELAGGKISMEVRDEYPTKMEDFPV 418 Query: 406 FMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 +N E RL G + E RI E L V E + ++ VP++R DV+ D+VE+I Sbjct: 419 RLNYEYCDRLIGKKLGHETIRRIAESLEMRVQKEDAEGLDLLVPAYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR------VLASRAMMEVVNWSF-- 515 LRIYG + ++ +P E K +L++ + R R L E++N S Sbjct: 479 LRIYGYNNVE---IP---TELKSSLTIAEEADRNYHRENIIGEQLVGEGFSEIMNNSLSK 532 Query: 516 --ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +E + + ++++NP+SAD+ MR +LL G L++ RNV+R + FEV Sbjct: 533 SSYYEETELNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVG 592 Query: 574 HVY----ENDTPEG------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +VY E T E Q Y A G ++GS W+ EE ++ KA Sbjct: 593 NVYKYNKEKWTEESPVKAYVQDYHMALWVTGKR-VQGS---WAHPDEESS----FYELKA 644 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V+ L E + + ++ +KT A VL G +L FGL Sbjct: 645 YVENILHRIGVAQGLLVSEKSDNNVF--DKAIALKTRAGKVLVEMGILSYRLLKSFGLEQ 702 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR 742 + + LD + + R + +S V RDLA +VD + + I + D+ Sbjct: 703 KV--YYAELDWAGLMKAIRKNRLQFQEISKYPAVSRDLALLVDDKVEFAQIEEIARQTDK 760 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A Sbjct: 761 KQLKRVELFDVYQGKNLPEGKKSYAVNFILQDESKTLNDKAIDAIMQKLIKNLTNKLGAE 820 Query: 802 LR 803 LR Sbjct: 821 LR 822 >gi|332076418|gb|EGI86881.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA41301] Length = 801 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 245/824 (29%), Positives = 425/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVESVESPAADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++ P L + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKGILEALFTPL-GLQVTYTATS 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEGAL 698 Query: 704 TKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|293364761|ref|ZP_06611478.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus oralis ATCC 35037] gi|307703008|ref|ZP_07639955.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] gi|291316211|gb|EFE56647.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus oralis ATCC 35037] gi|307623401|gb|EFO02391.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus oralis ATCC 35037] Length = 801 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 427/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRTGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L+D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPQDAVPGEEVFSYLDLNDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFSLTETNEAAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK + Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKFVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ +N++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLVITVADKPVALAGVMGGQATEISENSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNEEAFIVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLAVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K +A +R Sbjct: 758 VGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQTSLEEKVHAEVR 801 >gi|319942324|ref|ZP_08016639.1| phenylalanyl-tRNA synthetase beta subunit [Sutterella wadsworthensis 3_1_45B] gi|319804197|gb|EFW01097.1| phenylalanyl-tRNA synthetase beta subunit [Sutterella wadsworthensis 3_1_45B] Length = 806 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 250/827 (30%), Positives = 420/827 (50%), Gaps = 67/827 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M FT WL+ +++ + +++ D LT GLEVE+V A S + +VLS + + D Sbjct: 1 MIFTEEWLRQYVNPALGTDELADALTMAGLEVEEVRTIAPAFSGVVVGEVLSCRDHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + +Q+VCGAPNVR G+ A G+ +P + + K+RG+ S GM+ Sbjct: 61 HLHVCEVNAGTGETLQIVCGAPNVRAGIKVACATIGAVLP-GDFRIKKSKLRGVVSMGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL +++D I LP DAPVG + Y L D I++ LTPNR D + V G+A D+ Sbjct: 120 CSTRELGINEDHNGIWILPDDAPVGVDIRQYARLDDAKIELKLTPNRGDALSVVGVARDV 179 Query: 179 VA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 A L + + +C S ++P+ D+ LC F ++G+ P+ Sbjct: 180 HAITGAPLTLPAMDPVAATC---SCTLPV----DVQAPDLCGRFTSRILRGLNAAAPTPD 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL+ G+RSISALVDI+NYV L+ G P+H +D +I +D LTVR A GE + L+ Sbjct: 233 WMKARLERCGMRSISALVDISNYVMLELGRPTHFYDLKKIPADRLTVRWAREGESVQLLN 292 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L P VI + + +AGI+GG+ + TTD+ +E A W P I + L Sbjct: 293 GETVALDPWYGVICAGDEPECLAGIMGGESSSISTETTDLFIESAFWFPKAIQGRCRKLN 352 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG------GTASDICIARNITYKPRKIV 405 TD+ YR+ERGVD L++I L+L +CG G +D+ A T P K+ Sbjct: 353 FSTDAAYRYERGVDFASTAEHLEYITRLVLGICGTPETTVGPVADVQTALP-TRAPVKMR 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +++ G+++P+E +RLGF + F V PS+R D+E + DL+EE+ R Sbjct: 412 V--DRCRKVVGVEIPVESMETSFKRLGFDFTYDDGVFTVVPPSFRFDIEIEEDLIEEVAR 469 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 +YG++++ P PL + K S ++ R ++ ++R +A + E++N+SF+ ++ +F Sbjct: 470 LYGLEKLPDRP-PLARSAMKP--SREERRDQHALRREMAEQGYQELINFSFVPEDWERVF 526 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP-EG 583 G + +LNPI++ +S MRT L+ GL+ N++R +FE+ V+ D E Sbjct: 527 AGNDSPIRLLNPIASQLSVMRTQLIGGLVDILKYNLNRRAERVRVFELGRVFFPDPSIEE 586 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEER----CRFVDLFDAKADALSVIEPFVSLDSLR 639 + G+R+ +G + D +++ R VD +D K D + P LR Sbjct: 587 GPWTVKGVRQPQ---HIAGLAYGDADDKQWGKPARRVDFYDVKGDLERLAAPM----KLR 639 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PI 696 F A HPGRS + ++ + G+ GE HP + L + FEV + ++ P+ Sbjct: 640 FVKEAFPALHPGRSAAVYLGSKRI-GFIGELHPKAAQAYELPHAPVVFEVEVPALLDRPL 698 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL------IDDVTVF 750 V +S V RDLA +V + L + + + + + +F Sbjct: 699 PN--------YVPVSKFQSVTRDLAVVVPAEMEVEKLFDAVAAAKKKDLRLAPLANFKLF 750 Query: 751 DVFQGKSLGE--GKKSVAIQVLI-----QPLKDTFRDDDIRILMDRI 790 D+++ + + +KS+A + + + L D D +R +++ + Sbjct: 751 DLYRPQDAVDTVAEKSLAFAIELSSRTEEALTDEQADGAVRAILEAL 797 >gi|253568556|ref|ZP_04845967.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 1_1_6] gi|251842629|gb|EES70709.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 1_1_6] Length = 820 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 248/835 (29%), Positives = 424/835 (50%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLDIEVVVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTLPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D G+I LK ++ L GGT S D+C+A P+ Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEIKDVCVAV-----PQD 415 Query: 404 IVFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLV 460 + S +V L G +P+E I+ L ++ E D ++VP +R DV+ D++ Sbjct: 416 FMVELSYEKVNSLIGKVIPVETIKSIVTSLEMKIMNETVDGLTLAVPPYRVDVQRDCDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 E+ILRIYG + ++ + + K V L E++N S + Sbjct: 476 EDILRIYGYNNVEIPTTLNSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLT---R 532 Query: 521 SVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Sbjct: 533 AAYYDGLENYSSNHLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNC 592 Query: 576 Y--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 Y + D +K +A G+ +G+ ++ +++ KA ++++ Sbjct: 593 YYFDADKKNPEKVLATYSEDYHLGLWVTGKKVANSWAHPDENSSVYELKAYVENILKRLG 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + L +L + + S + T L FG +L F + N EVY Sbjct: 653 LDLHNLVVGNLTDDIFATALS--VHTKGGKRLASFGVVTKKLLKAFDIDN-----EVYYA 705 Query: 693 SIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + K ++ K+ + +S VKRDLA ++D+++ + I + + +L+ +V Sbjct: 706 DLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEKKLLKEVE 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK++ GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 766 LFDVYEGKNIEAGKKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLNAKLR 820 >gi|294787537|ref|ZP_06752790.1| phenylalanyl-tRNA synthetase, beta subunit [Parascardovia denticolens F0305] gi|294484893|gb|EFG32528.1| phenylalanyl-tRNA synthetase, beta subunit [Parascardovia denticolens F0305] Length = 867 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 259/870 (29%), Positives = 422/870 (48%), Gaps = 76/870 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ D + E++ L +GLE E + + E + P + V+ + + + I Sbjct: 4 MGWLREHVAVPEDETYEQLAADLVKVGLEEEAIHHGEVIGPIVVGHVVDLVKEEQKNGKI 63 Query: 63 LRI------------DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + ++GK +VCGAPN+ L V PG+ +P + + RK Sbjct: 64 ISWCQVDVGSYNVEDESGKKVPRGIVCGAPNIAKDELVVVTLPGAVLP-GDFKIEPRKTY 122 Query: 111 GIESTGMMCSEKELMLSDDSASIM---------ELPIDAPVGGRLSDYLELSDPIIDVSL 161 G S GM S +EL L DD + I+ E D G L L L +P++++++ Sbjct: 123 GHLSDGMCASARELGLGDDHSGIILLKNYGLSKEQVEDLKPGDDLMGLLGLGEPVLEINI 182 Query: 162 TPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCK 215 TP+R RG+A + A + +N P S +I+ + D + + Sbjct: 183 TPDRGYAFSYRGVAREFHHSTGAVFTDPVDTLNERAPKLGHSTAGMGDIEVIVQDDNPIR 242 Query: 216 GFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 G C V G+ N V +P WM RL+ G+RS+S LVD+TNYV LD G P H +D Sbjct: 243 GQIGCDRYYARRVDGLDNTVKSPRWMAHRLQRSGMRSLSPLVDVTNYVMLDLGQPLHAYD 302 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG----RIQSIAGIIGGKHA 322 A +I+ + VRRA GEK++ LD + +DLS ++++I + DG RI IAG++GG++ Sbjct: 303 ADKIAPPIVVRRAVEGEKLVTLDGKSHDLSVEDLLITDSPDGVQGSRILGIAGVMGGQYG 362 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 + T +VL+E A +DP++IARS + I +++ RFERGVD + + L+ S Sbjct: 363 EVTEETRNVLLESAHFDPVSIARSARRHKIPSEASRRFERGVDYRLQAAAAEEAAELMSS 422 Query: 383 LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS-VIGEYDK 441 + GG AS + + T I F SEVKRL+G+D+ + IL +G G + Sbjct: 423 IAGGKASPTPVDYDWTVHVPSIRFKTSEVKRLTGLDLSVSQITEILTDIGCQWGGGGNGE 482 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 V+ PSWR D+ DLVEE+ R+YG D+I +P VE L+ Q+R R+V Sbjct: 483 LVVNPPSWRPDLAYPCDLVEEVARLYGYDRIPVR-VPQIAVEGAVGLTADQTRRRWVADT 541 Query: 502 LASRAMMEVVNWSFISKE--QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKAT 556 LA + E+ ++ F+ ++ Q Q E +++ NP++ D +R LL L Sbjct: 542 LAEYGLTEIWSYPFVGEQDFQDFALEAEQVEPISVQLANPLAGDRPFLRRDLLLTLAHTV 601 Query: 557 GRNVDRAIADFAIFEVSHVYENDT--------PEGQKYMAAGIRKGSSGI----EGSGRL 604 RN+ R + ++E+ HV++ D P GQ+ + ++G+ E + Sbjct: 602 QRNIRRGNPNVRLYELGHVFDWDPQAPAIPALPGGQRPTDEQLDALNAGLPEQPEHVAAI 661 Query: 605 WSDKSEE-----RCRFVDLFDAKADALSVIEPFVSLDSLRFESGA----PSWYHPGRSGI 655 + ++E+ R VD DA +A+ + + D LR + A P+ +HPGR Sbjct: 662 LTGEAEDAGWLGESRPVDWTDA-VEAVRRLSDRLGAD-LRLDQPAADQVPASWHPGRFAY 719 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 + + +G GE HP + + G FEV L + I Q + + +SS P Sbjct: 720 VTLADGTQVGQVGELHPRVNENLGFPAHSAAFEVDLTA--IFQAVKYTPLQAKPISSYPP 777 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V +DLAF V + A + I+ ++ + +FDV+QG +GEG+KS+A + + Sbjct: 778 VHQDLAFTVSFSVTASQVEEAIRQAAGPALESLELFDVYQGDQVGEGEKSLAYSITFRSP 837 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++ L +V V A LR+ Sbjct: 838 DKTLTSDEVDALRSSVVSAVQDGVGAQLRA 867 >gi|315226878|ref|ZP_07868666.1| phenylalanyl-tRNA synthetase beta subunit [Parascardovia denticolens DSM 10105] gi|315121010|gb|EFT84142.1| phenylalanyl-tRNA synthetase beta subunit [Parascardovia denticolens DSM 10105] Length = 869 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 259/870 (29%), Positives = 422/870 (48%), Gaps = 76/870 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ D + E++ L +GLE E + + E + P + V+ + + + I Sbjct: 6 MGWLREHVAVPEDETYEQLAADLVKVGLEEEAIHHGEVIGPIVVGHVVDLVKEEQKNGKI 65 Query: 63 LRI------------DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + ++GK +VCGAPN+ L V PG+ +P + + RK Sbjct: 66 ISWCQVDVGSYNVEDESGKKVPRGIVCGAPNIAKDELVVVTLPGAVLP-GDFKIEPRKTY 124 Query: 111 GIESTGMMCSEKELMLSDDSASIM---------ELPIDAPVGGRLSDYLELSDPIIDVSL 161 G S GM S +EL L DD + I+ E D G L L L +P++++++ Sbjct: 125 GHLSDGMCASARELGLGDDHSGIILLKNYGLSKEQVEDLKPGDDLMGLLGLGEPVLEINI 184 Query: 162 TPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCK 215 TP+R RG+A + A + +N P S +I+ + D + + Sbjct: 185 TPDRGYAFSYRGVAREFHHSTGAVFTDPVDTLNERAPKLGHSTAGMGDIEVIVQDDNPIR 244 Query: 216 GFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 G C V G+ N V +P WM RL+ G+RS+S LVD+TNYV LD G P H +D Sbjct: 245 GQIGCDRYYARRVDGLDNTVKSPRWMAHRLQRSGMRSLSPLVDVTNYVMLDLGQPLHAYD 304 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG----RIQSIAGIIGGKHA 322 A +I+ + VRRA GEK++ LD + +DLS ++++I + DG RI IAG++GG++ Sbjct: 305 ADKIAPPIVVRRAVEGEKLVTLDGKSHDLSVEDLLITDSPDGVQGSRILGIAGVMGGQYG 364 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 + T +VL+E A +DP++IARS + I +++ RFERGVD + + L+ S Sbjct: 365 EVTEETRNVLLESAHFDPVSIARSARRHKIPSEASRRFERGVDYRLQAAAAEEAAELMSS 424 Query: 383 LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS-VIGEYDK 441 + GG AS + + T I F SEVKRL+G+D+ + IL +G G + Sbjct: 425 IAGGKASPTPVDYDWTVHVPSIRFKTSEVKRLTGLDLSVSQITEILTDIGCQWGGGGNGE 484 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 V+ PSWR D+ DLVEE+ R+YG D+I +P VE L+ Q+R R+V Sbjct: 485 LVVNPPSWRPDLAYPCDLVEEVARLYGYDRIPVR-VPQIAVEGAVGLTADQTRRRWVADT 543 Query: 502 LASRAMMEVVNWSFISKE--QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKAT 556 LA + E+ ++ F+ ++ Q Q E +++ NP++ D +R LL L Sbjct: 544 LAEYGLTEIWSYPFVGEQDFQDFALEAEQVEPISVQLANPLAGDRPFLRRDLLLTLAHTV 603 Query: 557 GRNVDRAIADFAIFEVSHVYENDT--------PEGQKYMAAGIRKGSSGI----EGSGRL 604 RN+ R + ++E+ HV++ D P GQ+ + ++G+ E + Sbjct: 604 QRNIRRGNPNVRLYELGHVFDWDPQAPAIPALPGGQRPTDEQLDALNAGLPEQPEHVAAI 663 Query: 605 WSDKSEE-----RCRFVDLFDAKADALSVIEPFVSLDSLRFESGA----PSWYHPGRSGI 655 + ++E+ R VD DA +A+ + + D LR + A P+ +HPGR Sbjct: 664 LTGEAEDAGWLGESRPVDWTDA-VEAVRRLSDRLGAD-LRLDQPAADQVPASWHPGRFAY 721 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 + + +G GE HP + + G FEV L + I Q + + +SS P Sbjct: 722 VTLADGTQVGQVGELHPRVNENLGFPAHSAAFEVDLTA--IFQAVKYTPLQAKPISSYPP 779 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V +DLAF V + A + I+ ++ + +FDV+QG +GEG+KS+A + + Sbjct: 780 VHQDLAFTVSFSVTASQVEEAIRQAAGPALESLELFDVYQGDQVGEGEKSLAYSITFRSP 839 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++ L +V V A LR+ Sbjct: 840 DKTLTSDEVDALRSSVVSAVQDGVGAQLRA 869 >gi|167753739|ref|ZP_02425866.1| hypothetical protein ALIPUT_02020 [Alistipes putredinis DSM 17216] gi|167658364|gb|EDS02494.1| hypothetical protein ALIPUT_02020 [Alistipes putredinis DSM 17216] Length = 823 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 259/837 (30%), Positives = 408/837 (48%), Gaps = 47/837 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK +L TD+S E++ LT IGLEVE + R L+ + +VL+ +P Sbjct: 1 MNISYNWLKRYLKTDLSAEEMATILTDIGLEVESFEKIESIRGGLAGVVVGEVLTCTDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI----PENNMIVNVRKIRG 111 D D + +D G +Q+VCGAPN R GL + A G+ + E + KIRG Sbjct: 61 DSDHLHLTTVDVGGEAPLQIVCGAPNCRQGLKVLCATVGAVLYPNGGEEEFKIKRSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDCIG 170 +ES GM+C+E EL + IMELP DA VG +YL+L D +I + LTPNR D Sbjct: 121 VESLGMLCAEDELGIGASHEGIMELPADAKVGQPAWEYLKLEDDYVIGIGLTPNRIDAAS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + K + + P + ++ L+I +++S +A VK + Sbjct: 181 HIGVARDLAAYLKSQGKPVELQWPDVSAFAVDNHDLKIDVQVENSEAAPRYAGVTVKNCK 240 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GE 285 +P WM+ L+ G+ + LVDITN+V + G P H FDA++I V R C G Sbjct: 241 IGPSPEWMQNCLRTAGITPKNNLVDITNFVLFELGQPLHAFDAAKIDGGRIVVRTCEEGT 300 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD E L+ ++++I S + IAG+ GG +G D TTDV +E A ++P+ + + Sbjct: 301 PFVTLDGVERKLTANDLMICSAAKPMCIAGVYGGLDSGVSDTTTDVFIESAYFNPVWVRK 360 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG----TASDICIARNITYKP 401 + K G+ TDS +RFERGVD + LK L+ L GG +DIC A + Sbjct: 361 TAKRFGLNTDSSFRFERGVDPDIQVYALKRAALLMKELAGGEIASEITDICSA---PIEK 417 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 K+ V RL G ++P + IL L + E D + V+VP +R DV +ADLV Sbjct: 418 FKVELDIKRVNRLIGKEIPADTIRTILGALDIKIEAEEGDLWRVAVPPYRVDVTREADLV 477 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFIS 517 EEILRIYG + I P+P + V + + + R + + L + E+++ S Sbjct: 478 EEILRIYGYNNI---PVP-SHVNSALSYAPKPDRNKLMNLAADFLTANGFTEIMSNSLTK 533 Query: 518 KEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + E ++ILNP+S D++ MR +LL +L+A N + D ++E + Sbjct: 534 AAYYEGLTSYKPEHCVKILNPLSNDLNVMRQTLLFNMLEAVQLNANHRNGDLKLYEFGNC 593 Query: 576 YENDTPEG--QKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVI 629 Y D ++ + A + I +G W+ K E+ F +A A ++ Sbjct: 594 YFYDATAAMPEEPLKAYSEQFRLAIAVTGIAAPLSWNRKPEQ----ASFFTLRAIAEKLL 649 Query: 630 EPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 F + L +L+ ES Y S + A ++ G + F L + E Sbjct: 650 RRFGLDLYTLKSESLRSDLYGDALSFSLNDKARELV-QMGVVSSKLRKTFDLKQDVYYLE 708 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDV 747 + ++ + +K + K LS VKRDLA ++D+ + L +I +R L+ V Sbjct: 709 MDFGALVKATRKNKVSAK--ELSKFPEVKRDLALLIDKEVTFSALRDIAFAAERKLLKRV 766 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++FDV++G L EGKKS A+ +++ T D I M + +K A +R+ Sbjct: 767 SLFDVYEGDKLPEGKKSYALSFVLEDKTQTLTDKMIEQAMANLTAQFERKAGAQVRA 823 >gi|125972739|ref|YP_001036649.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium thermocellum ATCC 27405] gi|281416927|ref|ZP_06247947.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium thermocellum JW20] gi|125712964|gb|ABN51456.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium thermocellum ATCC 27405] gi|281408329|gb|EFB38587.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium thermocellum JW20] gi|316941027|gb|ADU75061.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium thermocellum DSM 1313] Length = 795 Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 253/834 (30%), Positives = 412/834 (49%), Gaps = 70/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK + WLKD++D +VS +++ D +T G +VE ++ + E ++ + K+LS+E++PD D Sbjct: 1 MKAPIDWLKDYVDINVSTKELADAMTMSGSKVEGIEVQGEEITKVVVGKILSLEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA NV VG A GS +P I + K+RG+ES GMM Sbjct: 61 RLQVAKVDVG-SEVLQIVTGAQNVNVGDYIPVALVGSTLPGGKKI-SKGKLRGVESYGMM 118 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L+ D I LP + +G + + L L+ II+ +T NR DC+ + Sbjct: 119 CSIEELGLTRDDCPDAPEDGIYILPKEEELGKDIKEVLGLNKEIIEFEITSNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + K K I+ + I ++ D+ LC FA VK V+ +P Sbjct: 179 GLAREAAVTLKTKFKRPVINVKEEGDDASQYISVEVKDTGLCPRFAARVVKDVKIGPSPK 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALD 291 WMR RLKA G+R I+ +VDITNYV L+ G P H +D I + + VRRA GE I LD Sbjct: 239 WMRDRLKAAGVRPINNIVDITNYVMLEYGQPMHAYDIKDIKGNKIIVRRAFDGEIIKTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +Q+ +L +VIA + R +AG++GG ++ D+T ++ E A ++ ++ + K LG Sbjct: 299 DQDRELDSSMLVIADEERAVGVAGVMGGANSEIKDDTKTIVFEAANFNGTSVRLTAKKLG 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KPRKIVFM 407 + T++ RFE+G+D + + + L+ L GT +C Y +PR I Sbjct: 359 MRTEASGRFEKGLDPENVEAAINRAAQLVEELGIGT---VCKGMIDCYPEKKEPRIIKLR 415 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++ L G ++P E+ + IL L F V + + V VP++R DVE +AD+ EEI R Y Sbjct: 416 VDKINSLLGTNIPKEEMIDILRALEFEV--DENNMTVKVPTFRDDVEREADIAEEIARFY 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGG 526 G + I++ L R + +Q+ +K + + + E +SF S K L Sbjct: 474 GYNNIEATLLSGKTATQGRK-TYKQTIEDLIKETMIACGLCETYTFSFTSPKVFDKLNLP 532 Query: 527 GQRELE----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ 576 EL I NP+ D S MRT+ +P +L N +R I + +FE+S VY Sbjct: 533 ADSELRKAVVISNPLGEDYSIMRTTTIPDMLAVISTNYNRRIEEARLFEMSKVYIPKSLP 592 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + PE + + G+ G L D +D K V+E + Sbjct: 593 LEELPEEKTVLTLGM---------YGEL------------DFYDLKG----VVEELLERL 627 Query: 637 SLRFESGAPSW----YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ +P +HPGR+ +I E G GE HP + + F C Y+ Sbjct: 628 GIKNYDVSPEKNNVVFHPGRTALINIDGEYA-GIIGEIHPEVAEKFE-----CPERTYIG 681 Query: 693 SIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 I + +K + + L V RD+A +V + + +IIK ++++ V + Sbjct: 682 VIEVETLVRKASMDCQYKGLPKYPAVTRDIAMLVKDEVMVKEIEDIIKQRAGKILESVKL 741 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EG KSVA + + T D+++ M +I++ + + A LR Sbjct: 742 FDVYKGKQVPEGMKSVAYSITFRASDRTLTDEEVGKAMTKILDGLKRNLGAELR 795 >gi|261855914|ref|YP_003263197.1| phenylalanyl-tRNA synthetase subunit beta [Halothiobacillus neapolitanus c2] gi|261836383|gb|ACX96150.1| phenylalanyl-tRNA synthetase, beta subunit [Halothiobacillus neapolitanus c2] Length = 799 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 261/837 (31%), Positives = 419/837 (50%), Gaps = 71/837 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M+F+ SWL++ ++ V + LT GLEV+ ++ E+ S + V SVE +PD D Sbjct: 1 MRFSESWLREWINPPVDTTTLAHRLTMAGLEVDAIEPAAESFSGVVVADVRSVEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R+ G + E Q+VCGA NVRVG+ A G+ +P +++ K+RGI S GM+ Sbjct: 61 KLKITRVTDGNN-EYQIVCGASNVRVGMRVPLATLGARLP-GGLVIKSAKLRGIPSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C EL + + ELP DAP+G + D+L L D +I++ +TPNR D + + GIA D Sbjct: 119 CGASELGIPSVVDGLWELPSDAPLGQSIRDWLNLDDSVIELGITPNRGDALSILGIARDC 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKGVR-NNVAP 231 A ++ L +S +++ D +D C + + GV P Sbjct: 179 SAL-------FDMDLTLCDQSSAVQVTSDAIQPAQIDAPDDCPVYLTQVISGVSVERRTP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM +RL+ G++ I +VDI NYV L+ G P H FD ++ LTVR A GE + AL+ Sbjct: 232 MWMSERLRRAGIKVIEPIVDICNYVMLELGQPLHAFDQQKLHGGLTVRHARPGETMDALN 291 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 Q+ +L D +VIA ++AGIIGG + T +++E A + P IA + LG Sbjct: 292 QQKLELDADCLVIADAAGPVALAGIIGGLGSAVSSETVSIVLESAHFTPEVIAGRARRLG 351 Query: 352 IITDSRYRFERGVDLQGMIP--VLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFM 407 + TD+ +RFERGVD ++P L +LI +CGG A A+ P IV Sbjct: 352 LTTDAAFRFERGVD--PLLPERALSRAAALIQQICGGQAGPASAAQGAQAPRLPAVIVLD 409 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRI 466 +R G+ +P E + L RLG V + + V+ PS R D+ DL+EE+ R+ Sbjct: 410 MDWAERRLGLAIPPEQARTFLVRLGCIVEFQSETILTVTPPSHRFDMVIAEDLLEELARL 469 Query: 467 YGVDQIKSEPL---PLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G D ++ P+ PLT V + S + V +ASR E +++SFI + Sbjct: 470 LGFDAFRA-PMGRSPLTIGVRPETENSFAK-----VADFMASRGYFEAISYSFIDPVVAE 523 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 LF + + + NPIS++M+ MR SL PGLL+A N +R + +FE+ ++ Sbjct: 524 LF-SSEPSITLANPISSEMAVMRQSLWPGLLQAVAFNQNRQQSRVRLFELGRSFKGSLDN 582 Query: 583 GQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS--- 637 Q+ A + G GR W ++ E+ VD FD K D +++ S+D+ Sbjct: 583 VQEIDQLAAVMVG-------GR-WPEQWAEKSAQVDFFDLKGDCEALLLHLGFSIDATSE 634 Query: 638 ----LRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFE 688 +RF++ A HPG+ +AEI++ G+ G HP+I + ++ + E Sbjct: 635 HPANVRFQAAAHPALHPGQ------TAEILIHDRPCGWLGAIHPDIAEKMDVNGSVFVLE 688 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDV 747 + L ++ K + S V+RDLA + +P L+++I K+ + +V Sbjct: 689 LDLHALQNRHLPMNKPR-----SRFPQVRRDLALLKPATLPISELLSLIKKDSPASLREV 743 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD + G + G +SVA++++ Q + T DD+I ++ I + +K N LR+ Sbjct: 744 GIFDRYVGTGIEPGFESVAVKLIFQESERTLTDDEIVGIISDIRAKLAQK-NIQLRT 799 >gi|229175267|ref|ZP_04302782.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus MM3] gi|228608099|gb|EEK65406.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus MM3] Length = 806 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 238/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEHVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K IS ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAISLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV V+ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSVFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|302561594|ref|ZP_07313936.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] gi|302479212|gb|EFL42305.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces griseoflavus Tu4000] Length = 840 Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 259/866 (29%), Positives = 422/866 (48%), Gaps = 88/866 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V++ A P + +V+++E Sbjct: 1 MRIPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEHLGADLKGPLVVGRVMTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFAVGDKVVVVLPGATLP-GGFSISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + VG + LEL D ++D+++T NR D Sbjct: 118 TYGKTSHGMICSSDELGMGDDGTHGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGD 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+++ D + C F V Sbjct: 178 CLSIRGVARETAIAYGL-PLRDPALLDVPGP-NAFGYPVKVS----DPAGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D + + VRRA Sbjct: 232 GLSPEARSPIWLKRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRGLVQGTIGVRRAG 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN---------TTDVLV 333 GEKI+ LD E L +++VI D +AG++GG D+ TTDV++ Sbjct: 292 EGEKIVTLDGVERKLHAEDLVITDDRGPIGLAGVMGGADTEIADHDAAENGGSSTTDVVI 351 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D + IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 EAAHFDQVAIARTARRHKLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVT 411 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 P I +++G+ E +R L+ +G V G+ D+ V+VPSWR D+ Sbjct: 412 EVVAPSAPHTITVAADHPDKVAGVSYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDL 470 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 + DL EE++R+ G + + P L + R L+ +Q R + R LA +E +N+ Sbjct: 471 TDPNDLAEEVIRLEGYENL---PSTLPRPPAGRGLTARQRLHRRIGRALAGAGYVEALNY 527 Query: 514 SFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 F+S++ G +R + ++NP+S + +RT+LLPGLL A RN R D A Sbjct: 528 PFLSEQVFDQLGLEADDPARRVVRLVNPLSDEEPALRTTLLPGLLGALRRNDGRGAHDLA 587 Query: 569 IFEVSHVYENDTPEGQKYMAAGI---RKGS----------------------SGIEGSGR 603 +FE V++ P ++ A + R+ S +G Sbjct: 588 LFETGLVFQ---PRDEQRTAVNLSVDRRPSEDDIAALDAALPYQPRHVAVVLAGAREQAG 644 Query: 604 LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS---A 660 W R R D DA A +V + L G +HPGR + + A Sbjct: 645 WWG-----RGRAGDWADAVEAARTVAREAGA--ELGVRKGQYGPWHPGRCAELTVTVDGA 697 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 E V+G+ GE HP +L GL C E+ LD++ ++ T + +S+ +D+ Sbjct: 698 ERVIGHAGELHPRVLKNLGLPARACAMELDLDAL---EQVGDDTPQAPGISTFPVATQDV 754 Query: 721 AFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTF 778 A +VD +PA + ++ L++ + +FDV++ + LGEG+KS+A + + T Sbjct: 755 ALVVDAFVPASDVEAALREGAGELLESIRLFDVYENAEQLGEGRKSLAYALRFRATDRTL 814 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 D+ + V +T A LR+ Sbjct: 815 TVDEASAAREAAVTLAGDRTGATLRA 840 >gi|228476241|ref|ZP_04060943.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus hominis SK119] gi|228269644|gb|EEK11146.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus hominis SK119] Length = 800 Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 246/821 (29%), Positives = 422/821 (51%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V + + + +T G+EV + D + + + V S E++PD D Sbjct: 1 MLISNEWLKDYVDAGVPAKDLAERITRTGIEVADIIDYSKDIKNLVVGYVTSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEELVQIVCGAPNVDENQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S D I P + G D L L+D I++ LTPNR+D + + Sbjct: 120 CSLQEIGVSSNVVPKDYENGIFVFPNEVTPGTDALDALYLNDQIMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + N + + S E+ +D+ ++ VK VR +P Sbjct: 180 GTAYEVAALYQAEMTKPNTTLNETETSATDELSVTVDNPEKVPYYSARVVKNVRIAPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD + + S + VR+A E + LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQNHMGSKDIVVRQANENETMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E L ++VI + ++AG++GG + D T +V+VE A++DP++I + + L Sbjct: 300 DTERTLIDTDIVITNGKEPIALAGVMGGDFSEVTDQTMNVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ G +A+ ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVNEAVDRACYLLEHYASGEVLKDRVAQGDLGSLVTPIDITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ ++ I E+LGF I D V VPS R+D+ K DL+EEI RIYG D Sbjct: 420 VNQTIGFNLSNDEIKAIFEQLGFKTIQNADTLTVYVPSRRKDISIKEDLIEEIARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 I S LP+ L+ +Q +TR VK L + + + +S +SK+ + F +R Sbjct: 480 NIPS-TLPVFDDVTSGKLTDRQYKTRTVKETLEGAGLNQAITYSLVSKDHAKDFALQERP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 + +L P+S S +R SLLP L++AT NV R + ++E+ V+ +++ P+ + Sbjct: 539 TISLLMPMSEAHSTLRQSLLPHLIEATAYNVARKNKNVRLYEIGRVFFGNGKDELPDEIE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K EE +D F AK + I ++LD +++G Sbjct: 599 YL-SGILTGEYVV----NTWQGKKEE----IDFFIAKG-VVDRIAEKLNLD-FTYKAGEI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I+ + + G+ GE HP + L FE+ DS+ R Sbjct: 648 KGLHPGRTAIVSLEGKEI-GFVGELHPQLAAENDLKRTYV-FELDYDSM-----MRVAVG 700 Query: 706 KVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + + V RD+A V++ +P+ L++II +N + ++ + VFDV++G+ L EGK Sbjct: 701 YINYEPIPKFPGVSRDIAMEVNRDMPSSELLDIIHENGEDILKNTLVFDVYEGEHLEEGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVAI++ ++T D+ + + D+I+E +K A +R Sbjct: 761 KSVAIRLNYLDTENTLTDERVSKVHDKILE-ALKAKGATIR 800 >gi|255659639|ref|ZP_05405048.1| phenylalanyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] gi|260848201|gb|EEX68208.1| phenylalanyl-tRNA synthetase, beta subunit [Mitsuokella multacida DSM 20544] Length = 811 Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 255/834 (30%), Positives = 414/834 (49%), Gaps = 53/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D D S E++ D T G+ VE V E L ++ +E++PD D Sbjct: 1 MQVSIKWLKDYIDFDWSAEELADRFTMAGVPVENVIRADEGLDKVVTGRIERLEKHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ + IQ++ GA NV G + A G+ +P N + + K+RG+ S GM+ Sbjct: 61 HLQICQMNVGEKELIQIITGAQNVAEGQVVPVAMVGAHLP-NGLHIKKGKLRGLPSNGML 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L ++ I LP D PVG D L L D +++ LT NR DC V Sbjct: 120 CSAGELHLDLTKLTEEEKDGIYILPADTPVGVPAKDVLGLDDVVLEFELTANRGDCFSVL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+ ++ K K I+C + + I ++ LC F+ +K V+ +P Sbjct: 180 GLVREIAVLTGNKPKWPAIACNEDDAAKAADMISIGIEARDLCDRFSTRVIKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 WM+QRL+ G+R+I+ +VD+TN+V ++ G P H +D I+ LT R A GE + L Sbjct: 240 EWMQQRLEGAGIRAINNVVDVTNFVMIELGQPMHAYDYDEITGHTLTARLAKEGENLHTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ +VIA +AGI+GG + TT V++E A ++ +I R+ + Sbjct: 300 DDSSRLAKGTELVIADAEHPAGLAGIMGGLETEVTEKTTTVVLEAASFNGPSIRRTARAC 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ +++ RFERGVD+ L L+ + T + I +P I + Sbjct: 360 GLHSEASGRFERGVDVTNTPRALDRACQLLQDMGACTVTQGIVDCYPEPKQPVTIDYTTD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYG 468 E+ R G ++P E+ ++IL LGF+V + ++ + V+VPSWR D DL EE+ RIYG Sbjct: 420 EINRRLGTEIPGEEMVKILTELGFTVEAKGEETYHVTVPSWRNDCTYMEDLSEEVARIYG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGG 526 D+I S V+ K+ S +Q+ +K LAS M E ++++F S + +L Sbjct: 480 FDKIASTTPFGRMVQGKQ--SAKQNFVDKIKHTLASLGMTEELSFAFTSTDLFDKLLVPA 537 Query: 527 G---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------E 577 ++ + ILNP++ + +RT LL +++ RN R D +F+V+ V+ Sbjct: 538 DSPLRQAIPILNPLTDEAPLVRTCLLTSIMENAVRNFSRKNNDIKLFDVAPVFLPHALPL 597 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VS 634 + PE ++ M AG+ G G W+ +E VD FD K ++E + Sbjct: 598 TELPE-ERLMVAGLITGRREEVG----WNQGNE----MVDFFDMKG----IVEELFRVLG 644 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + E+G HPG++ + K E V+ GE HP FG+ + FE+ L+ + Sbjct: 645 ISKYTVEAGEHFAMHPGKTALFKKGRE-VIAAVGELHPQAAVNFGIKQKVYLFEMDLEVL 703 Query: 695 PISQKKRTKTKKVVHLSSL--HP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVF 750 T K H SL +P RDLA +VD+ + + + +I KN + VT+F Sbjct: 704 ------MKYTGKSFHFESLPKYPATARDLAIVVDESVASADIERVIAKNGGKHFKGVTLF 757 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV+ G+ + +GKKS+A + Q T DD+ I++ V K +A LR+ Sbjct: 758 DVYTGEHVAKGKKSLAFNLQFQSKDKTLTDDEADAAFKNILQAVEKHFDAELRA 811 >gi|224367578|ref|YP_002601741.1| PheT [Desulfobacterium autotrophicum HRM2] gi|223690294|gb|ACN13577.1| PheT [Desulfobacterium autotrophicum HRM2] Length = 814 Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 258/834 (30%), Positives = 425/834 (50%), Gaps = 50/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +LSWLK++ + + E++ LT GLEVE V +R + L + +V +V +P D Sbjct: 1 MKVSLSWLKEYAAIESAPEEMAAKLTMAGLEVESVVSRFDYLDRVVVARVEAVIEHPGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 R++ G + +VCGAPNVR G++ A G+ +P + + K+RG S GM+ Sbjct: 61 HLHCCRVNVGDTL-LNIVCGAPNVREGMVVPCAMVGAVLP-GDFKIKKGKLRGEVSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L D++ +M+L G L D L L+D + ++ LTPNR DC+ V G+A + Sbjct: 119 CSASELRLDSDASGLMDLDASLEPGTPLVDALALADAVFEIDLTPNRPDCLSVIGVARE- 177 Query: 179 VAAGLGKLKEINIS---CPLSSESIPLEI------KFDLDDSSLCKGFAMCCVKGVRNNV 229 AA +N+ P++ ES P + + D+ D LC + + V Sbjct: 178 AAAFQDPPVRLNVPGTILPVTDESKPASVSIDDLVRVDILDPELCPRYCAALLVDVTVGP 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W++QRL+AVGL I+ +VD+TNYV ++ G P H FD ++ + VR A K Sbjct: 238 SPFWLQQRLEAVGLTPINNVVDVTNYVMMETGQPLHAFDFDFLAQGRIEVRAAGGSSKFT 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E+ L PD ++I ++AG++GG+++ TT VL+E A ++P++I ++ K Sbjct: 298 TLDGKEHTLEPDMLMICDGEAPVALAGVMGGQNSEILPTTTRVLLESAYFNPVSIRKTAK 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVFM 407 GI TD+ +RFERGVD VL+ L+ ++ GG + I N + P +I Sbjct: 358 RTGIATDASHRFERGVDPVATRAVLERAAVLMAAVSGGALAKGVIDVNPLKSSPVQISLN 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRI 466 ++ R G D+ + +LE + F V + + V+VPS+R DV DL EE+ R+ Sbjct: 418 VEQLNRRLGTDLGTDQIKTLLESVEFRVEDQAEGVLSVAVPSFRVDVTRPEDLSEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----SV 522 +G D I++ P R LS + + V+ + E VN+SF S E + Sbjct: 478 WGYDNIQTS-FPAV-APSGRQLSPRIAFREKVRDCMVGFGFSEAVNYSFTSAESVDRLKL 535 Query: 523 LFGGGQRELE-ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 +R +E +LNPIS +M+ MR++LLP L + RN + + +FEV + + Sbjct: 536 DENDSRRSVERLLNPISEEMAVMRSTLLPWLFENMRRNHAQQVETLRLFEVGNTF---IA 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVS---LD 636 EG + S+ + GS + W K+ E VD FD K V+E +S + Sbjct: 593 EGHGVQPREVECLSAILTGSRVVPSWHAKAVE----VDFFDIKG----VVEGLLSDLGIK 644 Query: 637 SLRFESGA---PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +RF + G I+ + + LG GE P++L FGL FE+ L+ Sbjct: 645 GVRFSRATRQDQPYLRVGNGACIEANGRL-LGVVGEVAPDVLKNFGLKQTAFVFELDLEG 703 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN---IIKNVDRLIDDVTVF 750 + +S + +K L + RD+ I+D + A +++ + L++D +F Sbjct: 704 LLVSAPEAIVSKP---LPKFPAISRDITLIIDGDLAAADIMDEAAAFVQKESLVEDAFLF 760 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV+ GK L EGK+S++++V+ + L T ++ I+ L +RI +++++ A L S Sbjct: 761 DVYAGKPLAEGKRSISLRVVYRSLDKTLKEKKIKGLHERISKHLIETFKADLPS 814 >gi|315611845|ref|ZP_07886764.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] gi|315316023|gb|EFU64056.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis ATCC 49296] Length = 801 Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 244/827 (29%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS + P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCKDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPQDAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +++ + + L + D D + +A + + Sbjct: 180 VAHE-VAAIYDKAVNFKEFSLTETNEAAADALSVSIDTDKAPY---YAARILDNATIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGSEIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++++I + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLIITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAESFTVSVPRRRWDIAIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILETLFARLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 AALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGVGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|307708141|ref|ZP_07644608.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] gi|307615587|gb|EFN94793.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis NCTC 12261] Length = 801 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 245/827 (29%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VA+ K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VASIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGSADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAMISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 AALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|225858418|ref|YP_002739928.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 70585] gi|225721102|gb|ACO16956.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 70585] Length = 801 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 247/827 (29%), Positives = 425/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ S + L + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNESAADALSVSIGTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFARLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 AALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|160872523|ref|ZP_02062655.1| phenylalanyl-tRNA synthetase, beta subunit [Rickettsiella grylli] gi|159121322|gb|EDP46660.1| phenylalanyl-tRNA synthetase, beta subunit [Rickettsiella grylli] Length = 789 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 242/816 (29%), Positives = 405/816 (49%), Gaps = 41/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MK + WL+ ++ +S +++ + +T GLEV V +LS + ++S +P+ Sbjct: 1 MKLSEHWLRAWVNPALSTQQLTEQMTLAGLEVAAVHPVAGSLSHVVVGLIVSTLPHPNAS 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + + +VCGA N R GL A G+ +P N I IRG+ S GM+ Sbjct: 61 RLQVCEVDIGA-KILHIVCGAKNCRAGLKVAVAQIGAHLPPNKSIKET-TIRGVISQGML 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL L + S I+EL DAP+G + DYL+L+D I+D+ LTPNR DC+ V+G+A Sbjct: 119 CSSHELGLEEVSTDDGILELASDAPLGQAIYDYLQLNDYILDIHLTPNRGDCLSVQGLAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNV-APNW 233 D+ A ++ + P++ +S+ ++ K L+ + C ++ ++ + + P W Sbjct: 179 DISAMT----QQPMVRLPIAEQSVVIKDKMPLNVMATHACLHYSGRIIRNIHSQAQTPLW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M++RL+ G+R I +VD+TNYV L+ G P H FD + I+D + VR A S E + LD + Sbjct: 235 MQERLRRSGIRRIHPVVDVTNYVMLELGQPLHAFDLTHINDEVCVRYAQSEESVHLLDGK 294 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L ++VIA +I ++AGI+G + T V +E A + P ++A + G+ Sbjct: 295 TVRLDSKSIVIADKRKILALAGIMGAADSAVTSETQHVFLESAFFTPESLAGRARYYGLN 354 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 TDS YRFERGVD +P L+ LI + GG ++ I F +++K+ Sbjct: 355 TDSAYRFERGVDPAMTLPALERATQLISEIVGGEIGPRVHVKSPIKSIEAIKFHPTQLKK 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G+ + E I RLG + + +++ P+WR D+ + D +EE+ RI+G +I Sbjct: 415 RIGLSLNEEKIKAIFNRLGIKIQSIDGQTWQLIPPTWRFDLSLEVDFLEELARIHGYQRI 474 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 LP + ++ Q SRTR + +L RA EV+N+SF + + + L Sbjct: 475 PVT-LPNSSLKFHVEPETQLSRTR-IHDLLIDRAYHEVINYSFTASRLQKILTPQKETLN 532 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEGQKYMAAG 590 +LNP+S + + MR+SL PGLL N R + +FE + Y T ++Y+A Sbjct: 533 LLNPLSNEFAAMRSSLWPGLLNTLRYNQQRQHSRVRLFETGLCFYYHEGTLVQKEYLAT- 591 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPSWY 648 SG+ ++ +D F K+D +E SL ++ F G Sbjct: 592 --------VASGQQLPEQWGVANTPLDFFTVKSD----VEALASLAKKNIHFMPGTHPAL 639 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG S + E+V GYFG HP ++ L+ P+ E+ + +I K+ Sbjct: 640 HPGLSCNLHVDDEVV-GYFGALHPRLITELHLTGPLFCIELEISAITERPLPHFKS---- 694 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 S V+RD++F VD+ A T++ + ++ + FDV+ + E K+S+A+ Sbjct: 695 -YSKFPMVRRDISFWVDKKYAAQTILQSVNQHAGPYLYRSFFFDVYVNEQESE-KRSLAL 752 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q T D ++ LM ++ ++ LR Sbjct: 753 ALCWQHPTRTLTDAEVDHLMKVVISDLKNNFTVQLR 788 >gi|282864270|ref|ZP_06273326.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. ACTE] gi|282560757|gb|EFB66303.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. ACTE] Length = 837 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 265/873 (30%), Positives = 428/873 (49%), Gaps = 104/873 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L ++GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVAVGLEVETVERTGAGLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAILRID---TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D TG+ QEI VCGA N VG V PG+ +P + ++ RK Sbjct: 61 GFKKPIRFCTVDVGDANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GDFAISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + G + LEL D I+D+++TP+R Sbjct: 118 TYGKTSHGMICSTDELGMGDDGTHGIIVLPPEYEPGTDAIELLELVDEILDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+ + D C F V Sbjct: 178 CLSMRGVAREAAIAYGL-PLRDPALLDVPAP-NAFGHPVRVS----DPIGCSRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+R +P W+++RL+ G+R IS VD+TNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLRPEARSPIWLQRRLQKAGMRPISLAVDVTNYVMLELGQPLHAYDRTRVEGPIGVRRAQ 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK------HAGCDDNTTDVLVEVA 336 GEK+ LD + L +++VI D +AG++GG A D TT+V++E A Sbjct: 292 QGEKLTTLDGTKRVLDAEDLVITDDRGPIGLAGVMGGADTEIADAATEDAGTTEVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +D I+IAR+ + + +++ RFERGVD Q + V L++ L GGTA + Sbjct: 352 HFDAISIARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEIS 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 PR I +++G+ E +R L+ +G V G+ D+ V+VPSWR D+ Sbjct: 412 APSAPRTIAMPADHPDKVAGVSYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLAAP 470 Query: 457 ADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S P P + R L+ +Q R V R LA +E +++ F Sbjct: 471 NDLAEEVIRLEGYENLPSTLPTPPS----GRGLTERQRLHRRVGRALAGAGYVEALSYPF 526 Query: 516 ISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I + G +R + ++NP+S + ++RT+LLPGLL A RN R D A+F Sbjct: 527 IGEAALDRLGLEKGDARRRTVTLVNPLSDEEPSLRTTLLPGLLAALRRNEGRGSHDLALF 586 Query: 571 EVSHVYENDTPEGQKYMA--------------------------------AGIRKGSSGI 598 E V+ P G++ A AG R+ +G Sbjct: 587 ETGLVFR---PTGEETKAVRLPVDRRPTEEEIAALDAALPRQPRRAAVVLAGARE-QAGW 642 Query: 599 EGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G GR W+D S E R + A+ + VI +R + AP +HPGR + Sbjct: 643 WGKGRPADWAD-SVEAARTI----AREAGVEVI--------VRADRHAP--WHPGRCAAL 687 Query: 657 KTSA---EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + E++ G+ GE HP ++ L C EV LD + ++ + +S+ Sbjct: 688 YVTVNGQEVLFGHAGELHPRVVKDLHLPERTCAAEVELD---VLEQAVDGALQAPRISTF 744 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A +V +PA + ++ L++ + +FDVF G+ +GEG KS+A + + Sbjct: 745 PVATQDVALVVGTDVPADAVEKALREGAGPLLESLRLFDVFTGEQIGEGNKSLAYALRFR 804 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V ++T AVLR + Sbjct: 805 AADRTLTVEEATEARDSAVALAAERTGAVLRGA 837 >gi|256788797|ref|ZP_05527228.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces lividans TK24] gi|289772691|ref|ZP_06532069.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces lividans TK24] gi|289702890|gb|EFD70319.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces lividans TK24] Length = 840 Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 266/872 (30%), Positives = 432/872 (49%), Gaps = 100/872 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V++ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEHLGADLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVNVGQANGTGEPQEI--VCGARNFAVGDKVVVVLPGATLP-GGFSISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + VG + LEL D ++D+++T NR D Sbjct: 118 TYGKTSHGMICSSDELGMGDDGTHGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGD 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P++I D + C F V Sbjct: 178 CLSIRGVARETAIAYGL-PLRDPALLDVPGP-NAYGYPVKIA----DPTGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D S + + VRRA Sbjct: 232 GLSAEARSPIWLQRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRSLVQGTIGVRRAQ 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN---------TTDVLV 333 GEKI+ LD E L +++VI D +AG++GG + D+ T+DV++ Sbjct: 292 EGEKIVTLDGTERKLHAEDLVITDDRGPIGLAGVMGGANTEIADHDAAANGGNATSDVVI 351 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D ++IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 EAAHFDQVSIARTARRHKLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVT 411 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 + P I +++G++ E +R L+ +G V G+ D+ V+VPSWR D+ Sbjct: 412 EISAPSAPHTISVPADHPDKVAGVEYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDL 470 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 ++ DL EE++R+ G + + P L + R L+ +Q R V R LA +E +N+ Sbjct: 471 DDINDLAEEVIRLEGYENL---PSTLPRPPAGRGLTSRQRLHRRVGRALAGAGYVEALNY 527 Query: 514 SFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 F+ ++ G +R + ++NP+S + +RTSLLPGLL A RN R D A Sbjct: 528 PFVGEQVFDQLGLDADDPARRVVRLVNPLSDEEPALRTSLLPGLLAALRRNDGRGAHDLA 587 Query: 569 IFEVSHVY-------------------END-------TPEGQKYMA---AGIRKGSSGIE 599 +FE V+ E+D P+ +++A AG R+ +G Sbjct: 588 LFETGLVFHPRDEQRVAADLPVDRRPSEDDLAALSAALPDQPRHVAVVLAGARE-QAGWW 646 Query: 600 GSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG--- 654 G GR W+D E R + +A+A+ L G +HPGR Sbjct: 647 GKGRPADWADAVES-ARTI-AREARAE-------------LGVRKGQYGPWHPGRCAELF 691 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + E V+G+ GE HP +L GL C E+ LD++ ++ + +S+ Sbjct: 692 VTVVGEERVVGHAGELHPRVLKTLGLPARTCAMELDLDAL---ERVGDDIPQAPGISTFP 748 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF-QGKSLGEGKKSVAIQVLIQ 772 +D+A +VD +PA + ++ L++ + +FDV+ + LGEG+KS+A + + Sbjct: 749 VATQDVALVVDAFVPASEVEAALREGAGELLESIRLFDVYDNAEQLGEGRKSLAYALRFR 808 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+ D V ++ AVLRS Sbjct: 809 AKDRTLTVDEASAARDAAVALAGERVGAVLRS 840 >gi|121610038|ref|YP_997845.1| phenylalanyl-tRNA synthetase subunit beta [Verminephrobacter eiseniae EF01-2] gi|121554678|gb|ABM58827.1| phenylalanyl-tRNA synthetase beta subunit [Verminephrobacter eiseniae EF01-2] Length = 821 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 241/847 (28%), Positives = 421/847 (49%), Gaps = 70/847 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ ++ TLT GLEVE + R P T V + +V ++P+ Sbjct: 1 MQFPESWLREFCNPPLTTVELAQTLTMAGLEVEAL--RPVAPPCTRVVVGHIKAVAQHPE 58 Query: 58 LD-CAILRIDTGKHQEI-QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR----KIRG 111 D + ++D G+ + +VCGAPN RVG+ A G+ +P + VR ++RG Sbjct: 59 ADRLRVCQVDVGQGGALLNIVCGAPNARVGIKVPCALVGAELPAGDDGQPVRIELGQLRG 118 Query: 112 IESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 + S GM+CS +EL LS++ ++EL AP+G + +L+L D + + LTPN + C+ Sbjct: 119 VPSQGMLCSARELRLSEEHGGGLLELDASAPLGQDIRVHLDLDDMLFTLKLTPNLAHCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNV 229 V GIA ++ A L++ S P + I ++ + + LC F+ V+ + + Sbjct: 179 VHGIAREVSALTGAALQQP--SFPAVAARIADKLPVQVSATDLCGRFSGRIVRHLNPHAT 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WMR+RL G RS++ LVDI+NYV + G PSH+FD +I L VR + GE++ Sbjct: 237 TPQWMRERLARCGQRSVAPLVDISNYVMFELGRPSHIFDLDKICGGLHVRWSKPGEQLTL 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD L VIA D +++S+AGI+GG + T + +E A W P +A + Sbjct: 297 LDGNRITLDDKVGVIADDEQVESLAGIMGGNATAVSEQTRHIYIEAAFWWPKAVAGRSRR 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG------GTASDICIARNITYKPRK 403 L TD+ +RFERGVD + ++ I +L+ ++CG G D C+ + P+ Sbjct: 357 LNCATDAGHRFERGVDPSLTVEHIERITALVSAICGTPQTACGPIDDQCLNLPV---PQP 413 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + + ++ G+ + + L+RL ++ + V+ P+ R D+ + DL+EE+ Sbjct: 414 VTLRVARAAKVIGMPLTQQQCADALQRLALPMVQGDGQLTVTPPAHRFDLTIEEDLIEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSV 522 R+ G D++ + P PL + + L+ + R+ + V+R LA E +N+SF+ + + Sbjct: 474 ARMVGYDKLPATP-PLAPMAPQ--LAAEARRSPFAVRRALAGAGYQETINFSFVPERWEL 530 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTP 581 + + +LNPI++ MS MR++L LL+ N+DR A +FE+ V+ D Sbjct: 531 ELAANPQPIRLLNPIASQMSVMRSTLFGSLLQVLRFNLDRKAARVRVFELGRVFLRADDI 590 Query: 582 EGQKYMAAGIRK-----GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + AGI + G + G W K + +D FD K D +++ P Sbjct: 591 KNTDTTVAGIHQPLRVAGLAYGPGDILQWGRKEQA----IDFFDVKGDVQALLAPL---- 642 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 S FE+ + HPGR + + + G+ GE HP + L FE+ LD+ + Sbjct: 643 SADFEAASHPALHPGRCARVLLNGRAI-GFVGELHPQWRQSWELPQAPVLFELELDA--V 699 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDD----VTVFDV 752 Q++ + + V + V+RDLA +V + + T +I+ V R D ++D+ Sbjct: 700 LQREVARFRPVARHQA---VERDLAVVVAERV---THADIMAAVQRAAPDTMRSAVLYDI 753 Query: 753 FQGKS---------------LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ K+ L G+KS+A+++ + + T + I + + + + + Sbjct: 754 YRPKAPRAGEHAAEPAPATGLAPGEKSLALRLTLASDEATLTETRIDTAVQAVADQLARC 813 Query: 798 TNAVLRS 804 T A LR+ Sbjct: 814 TGARLRA 820 >gi|114776991|ref|ZP_01452011.1| phenylalanyl-tRNA synthetase, beta subunit [Mariprofundus ferrooxydans PV-1] gi|114552512|gb|EAU54972.1| phenylalanyl-tRNA synthetase, beta subunit [Mariprofundus ferrooxydans PV-1] Length = 784 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 251/824 (30%), Positives = 418/824 (50%), Gaps = 61/824 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK SWLK ++ + +I D L +G EVE V+ R A+ + + S +PD D Sbjct: 1 MKIPFSWLKTYVSLTATPAQIADDLVRLGHEVEAVELPRAAVKGVRVGLITSKMPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++L+++ G+ + + +VCGA N+ G A G+ +P +++ KIRG S GM Sbjct: 61 KLSLLKVEIGEAEALDIVCGASNMGEGDKVPVATIGTSLP-GGLVIKKGKIRGEVSCGMC 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L+D+SA ++ LP DAPVG + +YL L + + D+S+TPNR DC+ RGIA DL Sbjct: 120 CSEVELGLADESAGLLILPADAPVGAEVGEYLALEEAVFDLSITPNRGDCMNARGIARDL 179 Query: 179 VA-AGLGKLKEIN-----ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A AGL ++ I +++ S+ + D C + + G+ +P Sbjct: 180 AADAGL-PFTDVTPAAVAIDAAVATPSVTVTAAQD------CPVYMARAINGISLADSPE 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+ L G+R ++ +VD+ NYV L G P H FDA ++S + +R A SGE ALD Sbjct: 233 WMQAALIMAGMRPVNGVVDVLNYVMLTMGQPMHAFDADKLSGDIAIRAAASGEAFAALDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L ++V+ D + ++AGI+G + +G D TT++++E A + P ++ + + + Sbjct: 293 RELKLHAGDLVVCDDSSVIALAGIMGSEPSGVSDVTTNIVLESAFFRPARVSETRRTYAM 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSE 410 ++++ RFERGVD + + ++I+ L GG+A +I + + T R ++ S Sbjct: 353 VSEASMRFERGVDPLMVATAMGQATAMIIDLFGGSAGEIAVCGDATAINADRTVLCSLSR 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+++P + + +L R+GF++ + D EV+VPS+R DV DL EE R+ G D Sbjct: 413 LESRLGVEIP-QATDEVLARMGFTLSRQGDALEVTVPSFRHDVSIPEDLSEEYARVIGFD 471 Query: 471 QIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK-EQSVLFGGGQ 528 I + PL T K + S+ + + ++VV ++FIS EQ + Sbjct: 472 AIPTLLPPLATTAPAKTDRSIHDA---------VAGGFLQVVTYAFISAGEQRLFVADDG 522 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYM 587 ++ + NPIS MS MR S+ PGLL RN++R A+ E Y +D ++ + Sbjct: 523 LDIALANPISDAMSVMRRSVWPGLLNTAKRNLNRQQPGVALAEQGRTYVRSDRGHDEENV 582 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD-----ALSVIEP-FVSLDS-LRF 640 A + +G + SD+ R D FD K AL + F++ DS L Sbjct: 583 LAWLM--------TGEVESDQWYGHARAADFFDLKGAVDGWLALRGLSGRFIADDSILGL 634 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ++G + GR + G G ++ D F + P+ E+ LD +P Sbjct: 635 QAGQSAKIMVGR---------VEAGRIGRVDADLADQFDIDAPVFVAEINLDLLPTG--- 682 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 K K V L+ V+RDL F+ D+ + ++N I++ +L+ + +FD++ GK + Sbjct: 683 --KQAKFVPLAEFPGVERDLVFLFDRGAASDAILNAIRSAGGKLLTEARIFDLYDGKGVP 740 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGK S+ I+ +Q K T D I+ + K+ A LR Sbjct: 741 EGKVSLGIRFTLQDGKRTLTQADSDAASSAIIAAMDKRFGAALR 784 >gi|150005970|ref|YP_001300714.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides vulgatus ATCC 8482] gi|254881834|ref|ZP_05254544.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 4_3_47FAA] gi|319641145|ref|ZP_07995848.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 3_1_40A] gi|149934394|gb|ABR41092.1| phenylalanyl-tRNA synthetase beta chain [Bacteroides vulgatus ATCC 8482] gi|254834627|gb|EET14936.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 4_3_47FAA] gi|317387276|gb|EFV68152.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 3_1_40A] Length = 820 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 247/830 (29%), Positives = 414/830 (49%), Gaps = 37/830 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEVQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPEGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSV 522 IYG + ++ + + K + Q + L E++N S + E S Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGSE 540 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 + + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TY-KNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEK 599 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS 637 PE K +AA + G+ +G+ S+ +++ KA L++ ++ + Sbjct: 600 KNPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGN 657 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + F + Y S + T +L FG I F + N EVY I Sbjct: 658 VVFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWK 710 Query: 698 Q-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 + K K+ KV LS VKRDLA ++D++I + I + +L+ +V +FDV+ Sbjct: 711 ELMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEVELFDVY 770 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GK+L GKKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 771 EGKNLEPGKKSYAVSFLLQDESATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|304384033|ref|ZP_07366488.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973] gi|304334821|gb|EFM01096.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella marshii DSM 16973] Length = 821 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 250/849 (29%), Positives = 417/849 (49%), Gaps = 74/849 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + W+K+++D D + E++ D LTSIGLEV ++ R L + +V+S +P Sbjct: 1 MNISYKWIKEYIDCDFTPEQMADILTSIGLEVASIEEVPAIRGGLRGLYVGRVVSCIAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN--MIVNVRKIRGIE 113 D D + +D G+ Q+VCGAPNV VG + A G + + + ++ K+RG+E Sbjct: 61 DSDHLHVTTVDLGRDAPAQIVCGAPNVAVGKKVIVADLGCILYDGDKEFVIRKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +I++ +T NR+D + Sbjct: 121 SYGMICAEDEIGIGTSHDGIIILPDDAPVGQPAAEYYHLESDWVIEIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + + P ++ S+P+E+ + ++ C +A + G Sbjct: 181 GVARDLYAWMVQHGYPTRLHRPTCDDFHVADHSLPIEVT--ICNTEACPRYACVSITGCH 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P+W+++ L +GLR I+ +VDITNY+ G P H FDA I + VR G+ Sbjct: 239 VGESPDWLKRHLTTIGLRPINNIVDITNYIMFAYGQPLHCFDADMIEGRHIIVRADNEGQ 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD + L P ++ I + IAG+ GG+ +G D TT V++E A + P I + Sbjct: 299 SFMTLDGNNHILGPHDLAICNSREPMCIAGVFGGRGSGTYDTTTHVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKI 404 S + G+ TD+ +RFERG D G++ LK L L GG S DI + P ++ Sbjct: 359 SARRHGLSTDASFRFERGTDPDGVLYALKQAAILCCQLAGGKVSMDIRDEYPMPIAPARV 418 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEI 463 V V RL G + E RI+ L ++ E D+ +++P +R DV+ D+VE+I Sbjct: 419 VLRYDYVDRLIGKQLGAETIRRIVTALDMTIEDENDEALTLTIPGYRVDVKRPCDVVEDI 478 Query: 464 LRIYGVDQIK-SEPL---PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 LRIYG + ++ E L P+ Q +D L+ V L E++N S Sbjct: 479 LRIYGYNNVELPEHLCFSPVIQRDDDHKYKLEN----LVGEQLVGCGFHEILNNSLTPAR 534 Query: 520 QSVLFG---GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 G R + I+NP+S D++ MR +LL G L+ RNV+R + ++E + Y Sbjct: 535 YYDDMGEPCPPTRLVHIMNPLSTDLNVMRQTLLFGGLETIRRNVNRQCPNLRLYEFGNCY 594 Query: 577 ENDT----------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +D P Q + G+ ++GS W+ E ++ KA Sbjct: 595 SHDERISADNDPVRPYPQ-HACLGLWLTGKSVQGS---WAHPDEA----ASIYQLKAYVE 646 Query: 627 SVIE----PFVSLDSL-----RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 ++++ P + L RF+ A + G + +++ LG G NI Sbjct: 647 NILQHVGLPLTETEVLAVTDTRFDH-ALEYRARGGASLVR------LGIVGR---NIRKC 696 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVN 735 F LS + E++ ++ KR +KV +S V RDLA ++D H+ + Sbjct: 697 FDLSTDVFFAEIHWSNL----YKRVHGRKVEIRDISKYPAVSRDLALLLDSHVTFAQVEQ 752 Query: 736 IIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + + +R + V +FDV++GK+L +GKKS A+ +++ + T D I +M ++++ + Sbjct: 753 VARQAERKFLKRVELFDVYEGKNLPDGKKSYAVNFILRDDQHTMNDKLIESIMAKLIDQL 812 Query: 795 VKKTNAVLR 803 K+ A LR Sbjct: 813 KKQLGAQLR 821 >gi|325855529|ref|ZP_08171866.1| phenylalanine--tRNA ligase, beta subunit [Prevotella denticola CRIS 18C-A] gi|325483812|gb|EGC86771.1| phenylalanine--tRNA ligase, beta subunit [Prevotella denticola CRIS 18C-A] Length = 822 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 256/842 (30%), Positives = 418/842 (49%), Gaps = 59/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D D++ ++ D LTS GLEV+ +D R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFDLTPQETADALTSTGLEVDALDEVETIRGGLKGLFVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + + + ++K +RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDKEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +ID+ +T NR+D + Sbjct: 121 SFGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYHLDSDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + + +P+++ ++++ C+ +A + Sbjct: 181 GVARDLYAWLTQNGYKTSLHRPDCSAFRVDNHDLPVDVT--IENTDACRRYACLSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G+ Sbjct: 239 VKESPKWLKDKLNVIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHRIIVKDKNEGK 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLAICNAEEPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TD+ +RFERG+D G + LK L L GG S T V Sbjct: 359 SARRHGLSTDASFRFERGIDPNGTVYALKQAAILCKELAGGKISMEVRDEYPTKMEDFPV 418 Query: 406 FMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 +N E RL G + E RI E L V E + ++ VP++R DV+ D+VE+I Sbjct: 419 RLNYEYCDRLIGKKLGHETIRRIAESLEMRVQKEDAEGLDLLVPAYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR------VLASRAMMEVVNWSF-- 515 LRIYG + ++ +P E K +L++ + R R L E++N S Sbjct: 479 LRIYGYNNVE---IP---TELKSSLTIAEEADRNYHRENIIGEQLVGEGFSEIMNNSLSK 532 Query: 516 --ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +E + + ++++NP+SAD+ MR +LL G L++ RNV+R + FEV Sbjct: 533 SSYYEETELNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVG 592 Query: 574 HVY----ENDTPEG------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +VY E T E Q Y A G ++GS W+ EE ++ KA Sbjct: 593 NVYKYNKEKWTEESPVKAYVQDYHMALWVTGKR-VQGS---WAHPDEESS----FYELKA 644 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V+ L E + + ++ +KT A VL G +L FGL Sbjct: 645 YVENILHRIGVAQGLLVSEKSDNNVF--DKAIALKTRAGKVLVEMGILSHRLLKSFGLEQ 702 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR 742 + + LD + + R + +S V RDLA +VD + + I + D+ Sbjct: 703 KV--YYAELDWAGLMRAIRKNRLQFQEISKYPAVSRDLALLVDDKVEFAQIEEIARQTDK 760 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A Sbjct: 761 KQLKRVELFDVYQGKNLPEGKKSYAVNFILQDESKTLNDKAIDAIMQKLIKNLTNKLGAE 820 Query: 802 LR 803 LR Sbjct: 821 LR 822 >gi|307704152|ref|ZP_07641077.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK597] gi|307622310|gb|EFO01322.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK597] Length = 801 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 425/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE +S + + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLSETDQAAADVLSVGIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQVTEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTIPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPR 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAMISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAVL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNSEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|152976945|ref|YP_001376462.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025697|gb|ABS23467.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cytotoxicus NVH 391-98] Length = 806 Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 239/823 (29%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGAPN+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAPNIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL +++ D A I P D VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCSLQELGIDAKLVAKDYADGIFIFPSDVEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I S+E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQESAEKTSDYIAVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKQIVVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + IAG++GG ++ + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQAHHLVITNGNEAVGIAGVMGGANSEVTNGTVNVLIEAAYFTSQTVRRASKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L++ GG A + + N+ K + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMVKYAGGEALEGVVEVDNLQVKEHTVSITVE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + I L F F ++VPS R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDITASEMGTIFTNLKFPFTEVEGAFHINVPSRRPDITIAEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + R L+ Q++ R V+R L + E + +S S +Q+ + Sbjct: 480 DHI---PVTLPKGTMTRGQLTEAQTKRRKVRRFLEGAGLYEAITYSLTSADQAKQYIVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A N+ R A++EV ++ E + P Sbjct: 537 NEKTPVNLALPMSEERSQLRLSLVPQLLEAVSYNLARKNDSVALYEVGSIFLPTAEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVTNHITYT 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + + FE+ L + ++ + Sbjct: 648 PAKREGMHPGRTADILLHGE-VIGFIGQLHPEAQKQLDVKDTFV-FELSLVKLFSAEVEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + + AG + +I L+ +VT+FD+++G+ + E Sbjct: 706 TYYSTIPRFPSM---TRDMAVVVAKDVKAGEMKKVIAEAGGELLKEVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V ++ A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLAVVEERFGAELR 805 >gi|326780368|ref|ZP_08239633.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces cf. griseus XylebKG-1] gi|326660701|gb|EGE45547.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces cf. griseus XylebKG-1] Length = 837 Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 261/859 (30%), Positives = 422/859 (49%), Gaps = 76/859 (8%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE-- 53 M+ LSWL++++D T+ + + L S+GLEVE V+ A P + KVL++E Sbjct: 1 MRVPLSWLREYVDLPETETGRD-VQAKLVSVGLEVETVEQIGAGLKGPLVVGKVLTIEEL 59 Query: 54 ---RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + P C + TG+ QEI VCGA N VG V PG+ +P + + R Sbjct: 60 EGFKKPIRFCTVDVGTANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GDFAIAAR 116 Query: 108 KIRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 K G S GM+CS EL + DD + I+ LP + VG + L+L D ++D+++TP+R Sbjct: 117 KTYGKTSHGMICSTDELGMGDDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIAVTPDRG 176 Query: 167 DCIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG A + A L++ +++ P ++ P++I D C F V Sbjct: 177 YCLSLRGAARETATAYGLPLRDPALLDVPAP-NAYGYPVQIG----DPIGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G++ +P WM++RL+ G+R IS VDITNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLQPEARSPIWMQRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRNRVQGTIGVRRAT 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN------TTDVLVEVA 336 GEK+ LD L +++VI D +AG++GG + D TT+V++E A Sbjct: 292 QGEKLTTLDGTVRVLDAEDLVITDDRGPIGLAGVMGGANTEIADADGEHALTTEVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +D I+IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 HFDAISIARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEIT 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 PR I + R++G++ E +R L+ +G V G+ D+ V+VPSWR D+ E Sbjct: 412 APSAPRTIAMPANHPDRVAGVEYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLNEP 470 Query: 457 ADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S P P + R L+ +Q R + R LA +E +++ F Sbjct: 471 NDLAEEVIRLEGYENLPSTLPTPPS----GRGLTDRQRLHRRIGRALAGAGYVEALSYPF 526 Query: 516 ISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I G +R ++++NPIS + +RT+LLPGLL A RN R D A+F Sbjct: 527 IGDAVLDQLGLAADDARRRTVKLVNPISDEEPALRTTLLPGLLGALRRNDGRGSHDLALF 586 Query: 571 EVSHVYENDTPEGQKYMAA--GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK------ 622 E V+ P G++ A + + + E +G + + R V L A+ Sbjct: 587 ETGLVFR---PTGEETAAVRLPVDRRPTDEEIAGLNAALPRQPRRAAVVLAGAREQSGWW 643 Query: 623 --------ADALSVIEPFVSLD----SLRFESGAPSWYHPGRSGIIKTSA---EIVLGYF 667 ADA+ + ++R + AP +HPGR + S E + G+ Sbjct: 644 GKGTPATWADAVEAARSIAAEAGVEVAVRADQHAP--WHPGRCAALYVSVNGEETLFGHA 701 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ++ L C EV LD + ++ + +S+ +D+A +V Sbjct: 702 GELHPRVIKALHLPERTCAAEVELD---VLERAVDGALQAPRISTFPVATQDVALVVAGD 758 Query: 728 IPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 +PA + ++ L++ + +FDVF G+ +G G KS+A + + T ++ Sbjct: 759 VPAADVERALREGAGELLESLRLFDVFTGEQIGGGNKSLAYALRFRAADRTLTVEEASAA 818 Query: 787 MDRIVENVVKKTNAVLRSS 805 D V ++T AVLR + Sbjct: 819 RDSAVALAAERTGAVLRGA 837 >gi|21220091|ref|NP_625870.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces coelicolor A3(2)] gi|12229971|sp|O88054|SYFB_STRCO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3581849|emb|CAA20805.1| putative phenylalanyl-tRNA synthetase beta chain [Streptomyces coelicolor A3(2)] Length = 840 Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 265/872 (30%), Positives = 426/872 (48%), Gaps = 100/872 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V++ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEHLGADLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVNVGQANGTGEPQEI--VCGARNFAVGDKVVVVLPGATLP-GGFSISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + VG + LEL D ++D+++T NR D Sbjct: 118 TYGKTSHGMICSSDELGMGDDGTHGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGD 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P++I D + C F V Sbjct: 178 CLSIRGVARETAIAYGL-PLRDPALLDVPGP-NAYGYPVKIA----DPTGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D S + + VRRA Sbjct: 232 GLSAEARSPIWLQRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRSLVQGTIGVRRAQ 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN---------TTDVLV 333 GEKI+ LD E L +++VI D +AG++GG + D+ T+DV++ Sbjct: 292 EGEKIVTLDGTERKLHAEDLVITDDRGPIGLAGVMGGANTEIADHDAAENGGNATSDVVI 351 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D ++IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 EAAHFDQVSIARTARRHKLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVT 411 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 + P I +++G++ E +R L+ +G V G+ D+ V+VPSWR D+ Sbjct: 412 EISAPSAPHTISVPADHPDKVAGVEYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDL 470 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 ++ DL EE++R+ G + + P L + R L+ +Q R V R LA +E +N+ Sbjct: 471 DDINDLAEEVIRLEGYENL---PSTLPRPPAGRGLTSRQRLHRRVGRALAGAGYVEALNY 527 Query: 514 SFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 F+ ++ G +R + ++NP+S + +RTSLLPGLL A RN R D A Sbjct: 528 PFVGEQVFDQLGLDADDPARRVVRLVNPLSDEEPALRTSLLPGLLAALRRNDGRGAHDLA 587 Query: 569 IFEVSHVYE-----------------------------NDTPEGQKYMAAGIRKGSSGIE 599 +FE V+ D P + AG R+ +G Sbjct: 588 LFETGLVFHPRDEQRVAADLPVDRRPSEDDLAALDAALPDQPRHVAVVLAGARE-QAGWW 646 Query: 600 GSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG--- 654 G GR W+D E R V +A+A+ L G +HPGR Sbjct: 647 GKGRPADWADAVES-ARTV-AREARAE-------------LGVRKGQYGPWHPGRCAELF 691 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + E V+G+ GE HP +L GL C E+ LD++ ++ + +S+ Sbjct: 692 VTVDGEERVVGHAGELHPRVLKTLGLPARTCAMELDLDAL---ERVGDDIPQAPGISTFP 748 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF-QGKSLGEGKKSVAIQVLIQ 772 +D+A +VD +PA + ++ L++ + +FDV+ + LGEG+KS+A + + Sbjct: 749 VATQDVALVVDAFVPASEVEAALREGAGELLESIRLFDVYDNAEQLGEGRKSLAYALRFR 808 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+ D V ++ AVLRS Sbjct: 809 AKDRTLTVDEASAARDAAVALAGERVGAVLRS 840 >gi|303232959|ref|ZP_07319640.1| phenylalanine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] gi|302480957|gb|EFL44036.1| phenylalanine--tRNA ligase, beta subunit [Atopobium vaginae PB189-T1-4] Length = 829 Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 253/850 (29%), Positives = 414/850 (48%), Gaps = 67/850 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + WL +D + + + D G EVE V+ A ++ +V+S +PD D Sbjct: 1 MRISYEWLSSLIDLPAAPQTLVDEFIRTGTEVEAVETIGADITHVVTSQVVSKVPHPDSD 60 Query: 60 CA-ILRIDTGKHQE--------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + +D G + +QVVCGA N G V A G+ +P N+ + K+R Sbjct: 61 HMFVCMMDVGTYNTDEAGNPALLQVVCGAQNFNEGDKTVTALVGATLP-GNVHIKEGKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G++S GM CSE EL L+ +SA IM LP DAPVG + LSD +ID +TPNR DC+ Sbjct: 120 GVKSCGMNCSESELGLASESAGIMILPPDAPVGVDFCTWKNLSDTVIDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + G+A + V+A L + ++I+ P SSE + + D SLC + ++ V Sbjct: 180 MEGMAYE-VSAMLN--EPVHITHPQLKTTSSEKTSDIVDVTIADESLCSRYTARVIRNVT 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS------DVLTVRR 280 +P W+R+RL A G R I+ +VDITNYV G+P H FD S+I+ + VR Sbjct: 237 IAPSPEWLRRRLIAAGTRPINNVVDITNYVLYLTGHPLHAFDLSKINCGDDGKRHIVVRA 296 Query: 281 ACSGEKILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A GEK+ LD E L+ D +VI+ D R +AG++G +++ D+NT DVL+E A ++ Sbjct: 297 ARDGEKLTLLDESERTLTSDMIVISDGDERAVCLAGVMGAQNSEIDENTCDVLLESAAFN 356 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT--ASDICIARNI 397 +++R+ +NL +I+++ R+ER VD + I + C G + + Sbjct: 357 AGHVSRTSRNLDLISEASIRYERQVD-PSSCDIASEIACALFEECAGAQVSCGLVDVYPT 415 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK----------FEVSVP 447 PR I V L+G D+P L RLG SV+ + V+VP Sbjct: 416 PEAPRVIDLRPQRVCALAGADIPRAFMCERLSRLGCSVVDDGAGSGADAVDGGVLHVTVP 475 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 R D+ + DLVEE++R++G I + LP + L+ QQ R + RVL ++ + Sbjct: 476 PTRFDLTREIDLVEEVVRLWGEGDIAAT-LPAAK-NHAGGLTPQQQLKRTIGRVLRAQGL 533 Query: 508 MEVVNWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 E V ++F G G + I+ P+ AD S MR ++PGLL+A N+D Sbjct: 534 SETVTYNFADPRDLAQLGMSEEGKGVPVRIMRPLVADQSEMRRDIIPGLLRAVAYNIDHG 593 Query: 564 IADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE-ERCRFVDLF 619 +A+ ++E+ V+ E+ + + M A + G+ W DKS D F Sbjct: 594 VANVHLYEIGRVFYGHEHKSLPRETRMVAAVMSGA---------WDDKSWCSAPSAFDFF 644 Query: 620 DAKADALSVIEPFVSLDSLRFESGAP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 DAK ++ ++ +RF+ P W PG + + + G+ G HP L Sbjct: 645 DAKGIVEQLLRAL-RIEKVRFQPADPDACGWLQPGNAAQVLIGGQPA-GWVGAIHPLSLQ 702 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 FG+ P+ FE+ D + + K +V +L V DLA +V + + +++ Sbjct: 703 KFGVDTPVFAFELSFDELVRNAHKELAYTEV---PTLPGVSLDLAIVVPEELGYESIMQR 759 Query: 737 IKNV-DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 I++ +L+ +V +FD+++ +G GKKS+A + + T ++ +++E + Sbjct: 760 IRSAGGKLLSEVRLFDMYRDDVRVGVGKKSMAFALTYRADDHTLTSQEVDKAHKKLIEKI 819 Query: 795 VKKTNAVLRS 804 + A +RS Sbjct: 820 SRSCKAEIRS 829 >gi|148983962|ref|ZP_01817281.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae SP3-BS71] gi|147924109|gb|EDK75221.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae SP3-BS71] gi|301799635|emb|CBW32192.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae OXC141] Length = 801 Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 248/827 (29%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V+ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVELPAAGLSKIVVGEVLSCEAVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +I+ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQINVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQATEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVIQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 701 RTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 GALQPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|294775532|ref|ZP_06741042.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides vulgatus PC510] gi|294450582|gb|EFG19072.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides vulgatus PC510] Length = 820 Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 245/830 (29%), Positives = 412/830 (49%), Gaps = 37/830 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE V+ + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEIQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPEGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSV 522 IYG + ++ + + K + Q + L E++N S + E S Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGSE 540 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 + + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TY-KNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEK 599 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS 637 PE K +AA + G+ +G+ S+ +++ KA L++ ++ + Sbjct: 600 KNPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGN 657 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + F + Y S + T +L FG I F + N EVY I Sbjct: 658 VVFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWK 710 Query: 698 Q-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 + K K+ KV LS VKRDLA ++D++I + I + +L+ +V +FDV+ Sbjct: 711 ELMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEVELFDVY 770 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GK+L GKKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 771 EGKNLEPGKKSYAVSFLLQDESATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|148998255|ref|ZP_01825724.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP11-BS70] gi|168576518|ref|ZP_02722392.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|307067201|ref|YP_003876167.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae AP200] gi|147755898|gb|EDK62942.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP11-BS70] gi|183577676|gb|EDT98204.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae MLV-016] gi|306408738|gb|ADM84165.1| Phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae AP200] Length = 801 Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 246/825 (29%), Positives = 425/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVIIGTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P L + + L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDRL---PTSLPKYDGTAGELTATQKLRRQVRTIAEGVGLTEIITYTLTTPEKAVEFTAQ 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T ++ Sbjct: 533 PSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPREE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + VD F AK ++E + L+ A Sbjct: 592 LPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTYTAT 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 645 SEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAA 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 698 LQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|312135100|ref|YP_004002438.1| phenylalanyl-tRNA synthetase subunit beta [Caldicellulosiruptor owensensis OL] gi|311775151|gb|ADQ04638.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor owensensis OL] Length = 791 Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 252/823 (30%), Positives = 423/823 (51%), Gaps = 53/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK +D + S+E++ D LT G +VE + R E + + KVL + +P + Sbjct: 1 MKVSLEWLKSFVDIECSVEELVDKLTMSGTKVEGYEKRLENIKNVVVGKVLEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + +DT K + + ++ A NV+VG A PG+ + N ++V + +GI S GM+ Sbjct: 61 NLFVCLVDT-KDKILTIITAAKNVKVGSYVPVAKPGAVLA-NGKTIDVLEFKGIVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL L+ ++ I++ D +G + L + D IID +T NR DC+ Sbjct: 119 CSLDELGLTRGEFSYADENGIFILDGMNDNLIGIDIKTALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 V GIA ++ A LK N++ + E + + ++ D +C+ + +K V+ Sbjct: 179 VVGIAREIAAILNKPLKFPNMNFKETDEPVKNYLDSIEIQDKKICRRYMGRVIKNVKIEE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A GEKI+ Sbjct: 239 SPLWLRKRLVACGVRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLASDGEKIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D+NTT VL+E A ++P I R+ + Sbjct: 299 TLDGVERVLRSSDIVIADEKRAIAVAGVMGGLDTEVDENTTLVLLESATFNPAMIRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAEVAIQRACALIEQIGAGEVVEGTVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVS-VPSWRQDVEEKADLVEEILR 465 S +++L G+++ + + IL RL +YD K EV +P +R D+E AD+ EE++R Sbjct: 419 FSYIQKLLGLEIEKNEVINILNRLEI----KYDEKKEVFIIPPFRTDIENMADISEEVIR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ S + L+ +Q +K LA E+ ++SF S + + Sbjct: 475 IYGYDKLPSRVFMGNAISS--GLTQKQKMVNNIKNFLAHSGYYEIYSYSFESPKVYEILR 532 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE 582 G E + ILNP+ D S MR LL +LKA N+ R I D +FE+S V+ ++D Sbjct: 533 GYNLEDAVRILNPLGEDFSVMRMQLLSSILKAIYLNISRNIKDVKVFELSTVFKKSDEKL 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ + I GSS D + +LFD + + +RF S Sbjct: 593 PQEKLVLAI--GSSA--------QDFYSVKGVLENLFD-----------MLRIKEVRFSS 631 Query: 643 GAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP RS I T ++ LGY GE HP+IL+ F + I E+Y+D++ ++K Sbjct: 632 QHQNPNLHPTRSAKIYTDNQLFLGYIGEVHPDILEKFDIPARIVYAEIYIDALIKAEK-- 689 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 K KK L V+RD AF+V + + + I K ++++ +FD+++G+ + Sbjct: 690 -KDKKYTQLPKYPAVERDFAFVVPDDVESRVIEEIFKKYSSDILEEFYLFDIYKGQQIKP 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS A + + + T D DI + ++I++ +K N LR Sbjct: 749 GFKSYAYKAIFRSKSKTLSDGDINQVQEKILDE-LKNYNISLR 790 >gi|270292123|ref|ZP_06198338.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] gi|270279651|gb|EFA25493.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sp. M143] Length = 801 Score = 336 bits (862), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 244/825 (29%), Positives = 426/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ S L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEVASDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERELETNDLVITVADKPVALAGVMGGQETEISEKSSCVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYTDVEDVFRRLGFGLSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEG 583 +L E++ P++ D S +R +++ G+L NV R + A++E+ V+E P Sbjct: 531 AQPSKLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQIGNP-- 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + I + + G L ++K + VD F AK L + + L+ + Sbjct: 589 KEELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTAT 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 645 AEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAA 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 698 LQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|281420383|ref|ZP_06251382.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella copri DSM 18205] gi|281405528|gb|EFB36208.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella copri DSM 18205] Length = 822 Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 245/841 (29%), Positives = 429/841 (51%), Gaps = 57/841 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNVSYKWLKEYVDFDLTPQETADALTSCGLEVDALEEVQSVKGGLKGLYVGKVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + + + ++K +RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDQSFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +I++ +T NR+D +G Sbjct: 121 SLGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYHLESDWLIEIDITANRADALGHW 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + +E +P+++ ++ ++ CK +A + G Sbjct: 181 GVARDLYAWLKQNGYKTSLHRPSCDEFVVDNEDLPIDV--EIQNTEACKRYACVSITGCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA ++ + VR G Sbjct: 239 VKESPKWLQDKLNIIGLRPINNIVDITNYIMMAYGQPLHCFDADMVTGHKIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAGI GGK +G + T DV++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLSICNAEEPMCIAGIFGGKGSGTYETTKDVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-- 403 S + G+ TD+ YRFERGVD G I LK L L GG S +++ +P + Sbjct: 359 SARRHGLSTDASYRFERGVDPNGQIYALKQAAILCKQLAGGKIS--MQIKDVYPEPMQDF 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVE 461 V +N E RL G ++ E I L ++ E + ++ VP++R DV+ D+VE Sbjct: 417 PVRLNYEYAHRLIGKEIGAETIKNIATSLEMKIVKEDAEGIDLLVPAYRVDVQRPCDVVE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFIS 517 +ILRIYG + ++ +P TQ++ + + + + + ++A + ME++N S Sbjct: 477 DILRIYGYNNVE---IP-TQLKSSLTVQGDEDKAYHSQNLVAEQLVGEGFMEILNNSLSK 532 Query: 518 KEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 F + ++++NP+SAD+ MR ++L G L++ RN++ + FEV Sbjct: 533 ASYYTDFDLNKYPNETTVKVMNPLSADLGVMRQTMLFGGLESVVRNINHKSQNLKFFEVG 592 Query: 574 HVY-------ENDTPEGQKYMAAGIRKGSSG--IEGSGRLWSDKSEERCRFVDLFDAKAD 624 + Y ++P A + +G +EGS W+ E+ +++ KA Sbjct: 593 NTYIYNKEKWSEESPIKAYSQEAHMSLFITGKRVEGS---WAHADEQSS----IYELKAV 645 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 +V+ + +++ + + + G S +T A VL G + F + Sbjct: 646 VENVLRRVGMPQNNVVIKHSDNNIFSKGVS--YETRAGKVLVELGILSLKLKKAFDIEQD 703 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-R 742 + +++ D++ + KK T +S V RDLA +VD+++ + I + + Sbjct: 704 VFYADIHWDNLMKAVKKVNLT--YTDISKYPSVSRDLALLVDKNVEFAQIEQIAHQTEKK 761 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ V +FDV++G+ L EGKKS A+ ++Q + T D I +M +++ N+ K NA L Sbjct: 762 LLKSVVLFDVYEGEHLPEGKKSYAVNFILQDEEKTLNDKQIDAIMKKLIANLTGKLNAEL 821 Query: 803 R 803 R Sbjct: 822 R 822 >gi|306824499|ref|ZP_07457845.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433286|gb|EFM36256.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 801 Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 243/824 (29%), Positives = 426/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRTGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ +++ S + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVSFKKFSLTETNESAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGSEIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++++I + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLIITVADKPVALAGVMGGQTTEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V R+ G ++ D + RL F + G D+F VSVP R D+ +ADL EEI RIYG Sbjct: 416 EDVNRVLGTELSYADVEDVFRRLDFGLSGNADRFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLEVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EMASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|120611518|ref|YP_971196.1| phenylalanyl-tRNA synthetase subunit beta [Acidovorax citrulli AAC00-1] gi|120589982|gb|ABM33422.1| phenylalanyl-tRNA synthetase beta subunit [Acidovorax citrulli AAC00-1] Length = 812 Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 250/841 (29%), Positives = 400/841 (47%), Gaps = 67/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+F SWL++ + +S ++ +TLT GLEVE + + + ++ ++P+ D Sbjct: 1 MQFPESWLREFCNPPLSTAELAETLTMAGLEVEDLSPVAPSFHGVVVGEIKEAVQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIRGI 112 + ++D G+ + +VCGA N RVG+ +G PPG + V K+RG+ Sbjct: 61 RLRVCQVDVGQPALLNIVCGAANARVGIKVPCATVGAELPPGE--DGKPFAIKVGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+CS +EL LS+D + ELP DAPVG + YL L D + + LTPN + + V Sbjct: 119 ESQGMLCSARELKLSEDHEGLFELPADAPVGQDIRQYLALDDTLFTLKLTPNLAHALSVY 178 Query: 173 GIALDLVAAGLGKLKEINISC-PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA- 230 GIA ++ A L+E + P+ S + L +K D LC F+ V+ + + Sbjct: 179 GIAREVSALTGAPLREPAFTAAPVGSADV-LPVKIGAPD--LCGRFSGRVVRHINAKAST 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM RL G R +S LVDI+NYV + G PSH+FD +I L VR GE + L Sbjct: 236 PRWMLDRLARCGQRGVSPLVDISNYVMFELGRPSHIFDLEKIHGGLDVRWGREGESLKLL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + D+ VIA + +++S+AGI+GG D+T + +E A W P +A + Sbjct: 296 NGATVDVDGQVGVIADERQVESLAGIMGGDATAVSDDTRHIYIEAAFWWPKAVAGRSRRF 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC-----IARNITYKPRKIV 405 TD+ +RFERGVD + + ++ I L+L +C GT +C A N+ + R + Sbjct: 356 NFSTDAGHRFERGVDPRLTVEHIERITQLVLEIC-GTPETVCGPIDDQAPNLP-QARPVT 413 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ G+ + + L +LG + V+ PS+R D+ + DL+EE++R Sbjct: 414 LRVERAAKVIGMPLTLAQCADALRKLGLQPEEGDGRLTVTPPSYRFDIAIEEDLIEEVVR 473 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLF 524 I G Q+ P PL + K L + R+ + V+R LA+ E +N+SF+ ++ Sbjct: 474 IVGYGQLPETP-PLAPITPK--LRRENRRSAFAVRRELAALGYQETINFSFVEEQWERDL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 G + +LNPI++ MS MR+SLL LL+ N+DR +FE+ V+ D Sbjct: 531 AGNAEPIRLLNPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVRVFELGRVFLRDAGVAG 590 Query: 580 ---TPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 T EG Q AG G+ G WS K + VD FD K D +++ P Sbjct: 591 SDTTVEGFHQPMRVAGAAYGA----GDVLQWSRKDDA----VDFFDVKGDVEALLVPRKP 642 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + FE HPGR + + G+ GE HP + + FE+ LD++ Sbjct: 643 V----FEPAEHPAMHPGRCARVLLEGRGI-GFIGELHPKWRQQWDFAQAPVLFELELDAV 697 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN---VDRLIDDVTVFD 751 R + V+RD+A +V + ++ +I RL V +FD Sbjct: 698 LARDVPR-----FAAVGKQQAVERDIAIVVSEQTTHADVMRVIGGALPATRLRSAV-LFD 751 Query: 752 VFQGK---------SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 VF+ K G+KS A+++ + D +I + ++ + ++ A L Sbjct: 752 VFRPKRGKDGEPVAGFAAGEKSFAVRLALGDGVTALTDAEIDESLQAVLRQLEQQLGARL 811 Query: 803 R 803 R Sbjct: 812 R 812 >gi|77407952|ref|ZP_00784702.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] gi|77173410|gb|EAO76529.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] Length = 801 Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 238/825 (28%), Positives = 428/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TP R+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPXRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ D ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIDSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVF 406 L + ++S RFE+G++ + + +++ L G + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGSQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGVGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + E++ P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ Sbjct: 532 QATNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKE 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFES 642 + + + + +G + + + + VD F AK ++E + LD Sbjct: 591 DLPTEVETFTFAL--TGLVEEKDFQTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQ 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HPGR+ I + + G+ G+ HP + + E Y+ I +S + Sbjct: 645 KGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQYDIP------ETYVAEINLSTIESQ 697 Query: 703 KTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSL 758 + ++ ++ V RD+A ++ + + +V I++ V RL + +FDV+ G ++ Sbjct: 698 MNQALIFEDITKYPSVSRDIALLLAESVSHHDIVLAIESSGVKRLT-AIKLFDVYAGNNI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ M++I +++V+K NA +R Sbjct: 757 AEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 801 >gi|307126785|ref|YP_003878816.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae 670-6B] gi|306483847|gb|ADM90716.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae 670-6B] Length = 800 Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 248/825 (30%), Positives = 427/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGE-EERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 119 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 178 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 179 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTITPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 235 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 355 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 415 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 474 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 475 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 529 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 530 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 641 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E+ L +I + + Sbjct: 642 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 700 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 756 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 800 >gi|313205875|ref|YP_004045052.1| phenylalanyl-tRNA synthetase beta subunit [Riemerella anatipestifer DSM 15868] gi|312445191|gb|ADQ81546.1| phenylalanyl-tRNA synthetase beta subunit [Riemerella anatipestifer DSM 15868] gi|315022187|gb|EFT35215.1| phenylalanyl-tRNA synthetase subunit beta [Riemerella anatipestifer RA-YM] gi|325336684|gb|ADZ12958.1| EMAP domain [Riemerella anatipestifer RA-GD] Length = 800 Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 252/831 (30%), Positives = 417/831 (50%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK+++ TD+S EKI LT IGLEVE ++ E+ L + KVL+ E++P Sbjct: 1 MKISNNWLKNYIKTDLSSEKIGAYLTDIGLEVEGIEIFESIKGSLEGIVVGKVLACEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGI 112 + D +D G + +++VCGAPNV G L A G+ + + N+ + KIRG Sbjct: 61 NADKLKKTTVDVGGGKVLEIVCGAPNVEAGQLVPVAVVGTTLYDKEGNSFEIKKAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 S GM+C+E EL L + IM L VG +DY E++ D + ++ LTPNR+D + Sbjct: 121 VSEGMICAEDELGLGNSHDGIMVLDETHEVGKPFADYFEITKDEVYEIGLTPNRTDAMSH 180 Query: 172 RGIALDL----VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A+ + + + +S + +++D+ LC + + V+ Sbjct: 181 YGVARDLNAFLYASNITETEFEKVSSDIFQPEGEHGFSIEVEDAELCSRYIGAVLDNVKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEK 286 +P W++ +LKA+GL I+ +VD+TNY+ G P H FDA +IS V C SG + Sbjct: 241 KPSPEWLKNKLKAIGLNPINNVVDVTNYILHGLGQPLHAFDADKISRQKIVVGVCNSGTR 300 Query: 287 ILALDNQEYDLSPDNVVI--ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 LD E L+ ++I ASD + IAG+ GG +G D+TT V +E A ++P+++ Sbjct: 301 FTTLDGVERTLNGTEIMIKDASD-KPMCIAGVFGGSDSGVSDSTTKVFLESAYFNPVSVR 359 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK 403 ++ K G+ TD+ +RFERGVD+ + + +SL+ + D+ P Sbjct: 360 KAAKAHGLNTDASFRFERGVDVNAVRIAITKAISLLKEVAEAELVGDLIEVYPEKINPHY 419 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 ++F S++ ++ G+ + E +IL+ L ++ E D E+SVP++R DV + D++EE Sbjct: 420 VLFRYSKLDQILGVKIHRETVKKILKSLEIEILNEIPDGLELSVPTYRADVTREIDVIEE 479 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +LRIYG ++I S P + K + Q + R+L S EV+N S + + Sbjct: 480 VLRIYGYNKIDS-PQKIAFSPVKLSFEDQDALENTWARLLQSNGFNEVMNNSLTTVKDET 538 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTP 581 +++LNP+S D++ MRTSLL GLL+ N++R D FE+ +Y +T Sbjct: 539 ------NAVKLLNPLSNDLAFMRTSLLEGLLQNAVYNINRKNTDIKFFELGKIYHKFETY 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSL 635 + +K +A I SGR S+ D + K+ + L + L Sbjct: 593 KERKQLAMLI---------SGRHQSENWLVPKSSTDFYHLKSYVKLALEVLGITIQEKPL 643 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 RF G + G+ VL G+ P L + E+ +++ Sbjct: 644 QDARFSDGL-EFVSDGK----------VLARLGKVAPEYLKSADMEQEAFYAEIEVEA-- 690 Query: 696 ISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVF 753 Q+ RTK K + + ++RDLA ++D++I L ++K + V +FDV+ Sbjct: 691 -CQELRTKGNFKFREIPKFNKIRRDLALLLDKNITYSDLYQEVMKKPSPYLKSVNLFDVY 749 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +GK+L EGKKS A+ + + T + +I +M ++ K NA LRS Sbjct: 750 EGKNLPEGKKSYALSFELLNEEKTLEEKEISEIMGGLITLFEKNFNAELRS 800 >gi|166366292|ref|YP_001658565.1| phenylalanyl-tRNA synthetase subunit beta [Microcystis aeruginosa NIES-843] gi|166088665|dbj|BAG03373.1| phenylalanyl-tRNA synthetase [Microcystis aeruginosa NIES-843] Length = 811 Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 249/832 (29%), Positives = 428/832 (51%), Gaps = 49/832 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ +++WL++ + S +++ + LT G+EVE++ D RE I K++ + +P+ D Sbjct: 1 MRISINWLRELVKIAQSPQELAELLTIAGIEVEEIEDRREWAKGVVIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ +VCGAPN R +L A G+ + + N+ + K+RG++S GM+ Sbjct: 61 KLSVCQVDIGQENPSTIVCGAPNARADILVPVATLGTYLAKINLTIKPAKLRGVKSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ DS I + P+G + L L + I+D+S T NR+D + + G+A + Sbjct: 121 CSLAELGLTKDSEGIHIFSQENLPLGTDVRPLLGLDEVILDISPTANRADALSMIGVARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A G+L + L S ++ ++ ++ C + ++GV+ +P W++QR Sbjct: 181 VAALTGGELSLPKVK--LREFSPKKDLTLEISENKACPAYIGTVIEGVKIGPSPLWLQQR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-------SDVLTVRRACSGEKILAL 290 L+A GLRSI+ +VDITNYV L+ G P H FD R+ S + VR A GEKI+ L Sbjct: 239 LQAAGLRSINNVVDITNYVLLEWGQPLHAFDRDRLQSFAGGKSVTIGVRFAEEGEKIITL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L N++I ++ + ++AG++GG+ ++ T ++++E AL+DPI I RS K Sbjct: 299 DGQERSLKELNLLITANNKPVALAGVMGGQDTEVNEETVNLVLESALFDPIAIRRSSKAQ 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ ++S R+ERGV+ + + + LIL L GGT S A + R + + E Sbjct: 359 GLRSESSGRYERGVNPAALEYACQRAIDLILELAGGTVSSQVKADYRAERSRGSIELRLE 418 Query: 411 VKRLSGIDVPI----------EDSLRILERLGFSVIGEYDK---FEVSVPSWR-QDVEEK 456 + V + ED RIL LG + + V+VP +R +D+E + Sbjct: 419 RLQQLLGQVTLDDGAIGEILAEDVERILGNLGCELQLTSKNPVLWTVTVPDYRYRDLERE 478 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EE+ R+YG D+ + LP LS +++ R ++ + + E+V +S + Sbjct: 479 IDLIEEVARLYGYDRF-VDTLPAKTAAG--GLSFEETIQRRLREAFRAVGLTELVQYSLV 535 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E + E+ + NP+ + S +RT+LL GL++A N + FE+ V+ Sbjct: 536 KPELA--------EVVLANPLFVEYSALRTNLLDGLIEAFEYNQSQGNGSLNGFEIGRVF 587 Query: 577 ENDTPEGQKYMA-AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 ++ +Y A AGI G +GR W +E + ++AK L + +SL Sbjct: 588 RLESDNINEYDAIAGIFGGD--FFPAGR-WLRSGKEVA--MTWYEAKG-ILEAVFDRLSL 641 Query: 636 DSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ +E A + +HPGR+ + + LG FG+ HP + GL + FE+ + Sbjct: 642 -TVSYEKDAEDARFHPGRTASLWIGKQ-RLGIFGQLHPQLRQQKGLIEAVYAFEIQFPIL 699 Query: 695 PISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDV 752 + K + + S +P RD+AF V IP L IKN L++ V +FD Sbjct: 700 LATLSDSAKITPRLQVYSTYPGAARDIAFFVSTDIPVDRLTKTIKNAGGNLLEKVELFDR 759 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QG+++ E S+A ++ + T D+D+ LM ++ E +VK+ LRS Sbjct: 760 YQGQNVPENHCSLAFSLVYRASDRTLTDEDVEPLMTKVREALVKQFQVSLRS 811 >gi|24379900|ref|NP_721855.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus mutans UA159] gi|30316206|sp|Q8CWX2|SYFB_STRMU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|24377878|gb|AAN59161.1|AE014983_2 putative phenylalanyl-tRNA synthetase (beta subunit) [Streptococcus mutans UA159] Length = 801 Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust. Identities = 247/835 (29%), Positives = 425/835 (50%), Gaps = 66/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV ++ + +++ G+EVE VD E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSHELAEKMSTTGIEVEGVDVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG+ + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGEEESRQIVCGAPNITAGIKVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEYSDGIQILPEDAVPGESIFPYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV---- 229 +A ++ A K ++ + +ES + DL ++ + V NV Sbjct: 180 VAHEVAAI---YDKSVHFEDKVLTESD--KKAADLIKVAIASDKVLTYKARVVENVTIKP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D+L R+A +GEK+ Sbjct: 235 SPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEGKDILA-RQAKAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD + DL +++VI + ++AG++GG D ++ +V++E A++D ++ ++ Sbjct: 294 VTLDGEARDLIEEDLVITVADKPVALAGVMGGAATEIDASSKNVVLEAAVFDGKSVRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT------------ASDICIAR 395 L + ++S RFE+GV+ ++ L +++ L GT DI ++ Sbjct: 354 SRLNLRSESSSRFEKGVNYADVVKALDFAAAMLTELADGTVLAGQVSAGAVPTDDIQVST 413 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 ++ Y ++ G D+ D + RLGF + G +KF VSVP R D+ Sbjct: 414 SLDYVNVRL-----------GTDLVFSDIESVFARLGFGLSGNDEKFTVSVPRRRWDISI 462 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVN 512 +ADLVEEI RIYG D+ LP T E L+ Q R ++ + + E+++ Sbjct: 463 QADLVEEIARIYGYDK-----LPTTLPEAAGTVGELTKTQKLRRKIRNLAEGSGLSEIIS 517 Query: 513 WSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++ + E++V F ++ E++ P++ D S +R +++ G+L NV R + A++E Sbjct: 518 YALTTPEKAVAFTPNPTKITELMWPMTVDRSALRQNIVSGMLDTIAYNVARKSNNLALYE 577 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIE 630 + V+E T + +K + I + + G L ++K + VD F AK L I Sbjct: 578 IGKVFEQ-TADPKKDLPKEIDTFAFALTG---LVTEKDFQTAATPVDFFYAKG-VLEAIL 632 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + + + + HPGR+ +I+ + V+GY G+ HP + + EV Sbjct: 633 AKLEITVQFVATKEMANMHPGRTALIERDGQ-VIGYLGQVHPQTAKLYDIPETYVA-EVN 690 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVT 748 L+++ + K + + + V RD+A ++ + + +++ I V RLI V Sbjct: 691 LNALEAALKSDLVFEDITKFPA---VSRDIALLLSEKVSHQDILDAIAASGVKRLI-KVK 746 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+ G+ LG GKKS+A + Q D D+++ M++I + +K A +R Sbjct: 747 LFDVYAGEKLGVGKKSMAYSLTFQNPNDNLTDEEVAKYMEKITSALTEKVGAEVR 801 >gi|261880399|ref|ZP_06006826.1| phenylalanyl-tRNA synthetase [Prevotella bergensis DSM 17361] gi|270332944|gb|EFA43730.1| phenylalanyl-tRNA synthetase [Prevotella bergensis DSM 17361] Length = 822 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 248/835 (29%), Positives = 415/835 (49%), Gaps = 45/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + WLK+++D ++ ++ + LTS GLEV ++ +A L + KVL+ E +P Sbjct: 1 MKISYQWLKEYVDFSLTPQETAEALTSTGLEVSSLEEIQAIKGGLKGLYVGKVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D GK + Q+VCGAPNV G + A G + +N + ++RG++ Sbjct: 61 NSDHLHITTVDLGKEEPQQIVCGAPNVAAGQKVIVADLGCVLYDGDNKFTIKKTRLRGVD 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA VG +DY L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGIGTNHDGIIVLPEDAIVGTPAADYYHLESDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSE----SIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A D+ A L + + ++ P SE + L I +++++ CK +A + Sbjct: 181 GVARDMYAWLLQRGYKTSLHRPDCSEFAVDNEELNIDVEIENTQACKRYACLSITNCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA ++ + VR G K Sbjct: 241 ESPQWLKDKLTTIGLRPINNIVDITNYIMMAYGQPMHCFDADMVTGHKIIVRTQPEGTKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E++L ++ I + IAGI GG+ +G ++T +V++E A + P I +S Sbjct: 301 VTLDGVEHELGEHDLSICNAEAPMCIAGIFGGQGSGTYESTKNVVLESAYFHPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L L GG S ++I +P + + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGQIYALKQAAILCKKLSGGQVS--MQIKDIYPEPLEDFKV 418 Query: 408 NSEVK---RLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 N + + RL G + + I++ LG + E +D ++ VP++R DV+ D+VEEI Sbjct: 419 NLQFEYCDRLIGKQIGNDTIKNIVQSLGIKIEHEDHDGLQLLVPAYRVDVQRPCDVVEEI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS----KE 519 LRIYG + I+ + + + + + V L E++N S Sbjct: 479 LRIYGYNNIEIPTILKSSLTVAGDQDKEHQLENIVSEQLVGCGFNEIINNSLTKSSYYNS 538 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 SV ++++NP+SAD+ MR +LL G L++ RN++R + FE+ +VY Sbjct: 539 DSVSSYPWDNTVKLMNPLSADLGVMRQTLLYGGLESLARNINRKRNNLKFFELGNVYKYS 598 Query: 577 ---ENDTPEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 END + Y GI +E S W EE ++ KA +V Sbjct: 599 AEKENDQSPVKAYSQEHHLGIWITGKRVENS---WVHGDEES----SFYELKAYVENVFM 651 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEV 689 S+ + + + G+ + S VL FG+ +L F + N + F Sbjct: 652 RLGISKSMLVTTKTKN--NIFAYGLTQNSRNGQVLVEFGKLSRCVLHKFDIDNDV--FYA 707 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + + + + L+ V RDLA +VD++I + I + +L+ V Sbjct: 708 EFNWAGLMKAIKKNKVEFTELNKYPSVSRDLALLVDENIEFAQIEEIAHQTEKKLLKQVK 767 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+QGK+L EGKKS A+ ++ T D+ I +M ++++N+ K A LR Sbjct: 768 LFDVYQGKNLPEGKKSYAVNFTLEDDAQTLTDNKIDSIMKKLIKNLTSKLGAELR 822 >gi|168488269|ref|ZP_02712468.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|183572929|gb|EDT93457.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP195] gi|332074393|gb|EGI84869.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17570] Length = 801 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 245/825 (29%), Positives = 426/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ + DV +++ + +++ G+EVE V++ A LS + ++LS E P+ Sbjct: 1 MLVSYKWLKELVGIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEILSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II+ S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKKFADGIQILPENAVPGEEVFSYLDLDDEIIEFSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSHVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVAHKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + + VLG+ G+ HP + + E+ L +I + + Sbjct: 643 ATSEIASLHPGRTAVI-SFGDQVLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 701 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|329964781|ref|ZP_08301804.1| phenylalanine--tRNA ligase, beta subunit [Bacteroides fluxus YIT 12057] gi|328524632|gb|EGF51695.1| phenylalanine--tRNA ligase, beta subunit [Bacteroides fluxus YIT 12057] Length = 820 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 249/834 (29%), Positives = 421/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPEAAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK ++++ C +A +KGV Sbjct: 181 GVARDLYAYLVQNGKQTSLKKPEVDAFAVENHDLDIKVTVENNEACPRYAGVTIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A K + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAALMVKELAGGTVSSEIKDVCAA---PAKDFR 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLR-ILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 + +V L G +P ED+++ I+ L ++ E D + VP +R DV+ D++E Sbjct: 418 VELSYEKVHSLVGKVIP-EDTIKSIVTSLEMKIVDETADGLTLDVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPKTLKSSLTTKGECDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + ++NP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLMNPLSADLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCY 593 Query: 577 E--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 + +K +AA + G+ +G+ S+ +++ KA ++ + Sbjct: 594 HFNEEKKNEEKVLAAYSEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVENIFARLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 S+ +L + Y S ++T L FG +L F + N EVY Sbjct: 654 SMHNLVLGNLTDDIYAAALS--VQTKGGKRLATFGVVTKKLLKAFDIDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K K+ KV +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIKSVKVNYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V N+ K NA LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKIMSKLVANLENKLNAKLR 820 >gi|295101747|emb|CBK99292.1| phenylalanyl-tRNA synthetase beta subunit [Faecalibacterium prausnitzii L2-6] Length = 803 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 258/836 (30%), Positives = 424/836 (50%), Gaps = 66/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLK+ +D DV+ +++ + L S G EVE++ +A +S + K++ +E Sbjct: 1 MKVPFSWLKELVDIDVTAQELEEKLFSCGFEVEELIPLDAGISKVVVGKIVEMEPQEGTH 60 Query: 60 CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G++ +I++ GA N+++G A GS +P + + RK++G+ES GM+ Sbjct: 61 LTKCVVDCGEYGHDIRISTGAANMKLGDCVPAALDGSTLP-GGIRIKARKMQGVESNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L+DD ++ LP D+ G ++ + L D I D+S+T NR DC V Sbjct: 120 CSGEELGLNDDLFPGSEVYGLLILPEDSVPGTDIAPVVGLDDYIFDISITANRPDCQSVL 179 Query: 173 GIALDLVAAGLGK-----LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 GIA + VAA LGK + N C P+ +K + D LC + V+ +R Sbjct: 180 GIARE-VAAILGKPLHMPAMDYNTVCDADE---PISVKVEAPD--LCPRYMAHYVRNIRM 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 + +P WM++ L GLRSIS +VDITN+ L+ G P H FD ++++ +TVRRA GEK Sbjct: 234 SESPRWMKRHLALCGLRSISNVVDITNHTLLEMGQPMHAFDLNKVAGRSITVRRAVEGEK 293 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD +E+ L+P+N+VI + ++AGI+GG ++G DDNTT +L E A + ++ ++ Sbjct: 294 ITTLDEKEFTLNPNNLVICDAEKPVALAGIMGGANSGMDDNTTSLLFECATFARDSVRKT 353 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS---DICIARNITYKPR 402 + LG +DS R+E+GVD L + LI L CG + D+ R + K Sbjct: 354 SRALGQNSDSSARYEKGVDRHSPELGLARALHLIQELDCGDITTLEYDLTDGRPLERK-- 411 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVE 461 IV +++ + GI VP + + IL+RL F+V + D ++VS P +R+DVE DL E Sbjct: 412 HIVTTPAKICGVLGITVPDQTMIDILKRLEFTVDVQADGSWDVSAPLYREDVESFPDLAE 471 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E++R YG D I L V + L+ +Q + KR+LA++ E +F S + Sbjct: 472 EVIREYGYDHIVPTFLNTAAVTNG-GLNYEQKQQLKTKRLLAAQGFYEASTLAFYSNAEF 530 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + ++ + ILNPIS ++S MRT L P +L N+ + A+ +FE++ VY Sbjct: 531 DMLHIPAEDEARKAIRILNPISENLSVMRTLLAPSMLNVIVDNLKKGNAEGRLFEMAPVY 590 Query: 577 E------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 N+ P ++ + G + EE D F K + E Sbjct: 591 LAKELPINEHPHERQTLCIG---------------AFGPEE-----DFFTVKGALEGLAE 630 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE-V 689 F + ++ SW HPG S + + + LG FG+ I ++ + + Sbjct: 631 GFDL--TFTYQRETTSWLHPGISAAVYCNGK-RLGVFGKLANEINAELEIAKEQKDSQNI 687 Query: 690 YLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDV 747 YL + ++ + LS VKRDLA + D+ + G + IK LI +V Sbjct: 688 YLGELDYEALMSCVEGELRYKPLSPYAAVKRDLALVCDEAVACGDIEETIKKASPLITEV 747 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FD+++G +LGEGKKS+A + + ++ + + +++ N+ K +R Sbjct: 748 KLFDIYRGANLGEGKKSMAFSLTLSDPAAEVSNEQVERTVKKVLGNLKFKLGIEIR 803 >gi|257866177|ref|ZP_05645830.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC30] gi|257872508|ref|ZP_05652161.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC10] gi|257800111|gb|EEV29163.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC30] gi|257806672|gb|EEV35494.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC10] Length = 806 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 230/820 (28%), Positives = 431/820 (52%), Gaps = 31/820 (3%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++LD ++++ +++ D ++ G+EVE +D E L + +V +PD Sbjct: 1 MLVSYKWLNEYLDLSEITPKELADKMSVTGIEVEGIDVPEEGLKKIVVGEVTDCRPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I +++ G+ ++ Q+VCGAPNV+ G+ + A PGS I N+ + K+RG S GM Sbjct: 61 DHLSICQVNIGEEEDTQIVCGAPNVKSGIKVIVALPGSRIA-GNVKIKKGKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL +D + I LP +A VG + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQELGYADSVIPKEYAEGIYYLPAEAEVGTPVFPYLDMDDHIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A K I+ S + +I+ + +++ + + + GV +P Sbjct: 180 RGVAYEVGAIYRQTPKFPEIALNESEVAAADKIQVKVTEATDAPAYQIRIIDGVTIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRR E ++ L Sbjct: 240 QWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRGKENESLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + LS +++VI + ++AG++GG + + TT V +E AL+DP+ I + K Sbjct: 300 DGETRQLSSEDIVITNGTTPVALAGVMGGLDSEITETTTTVALEAALFDPLAIRLTSKKF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G++ + +LI L GGT I + +P ++ + Sbjct: 360 NLRSESSARFEKGINQATVAKACDAAAALIAELAGGTVLKGAVIGSQVAVEPVEVTITLA 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G ++ E+ I + LGF E D + +SVP R D+ +AD++EE+ RIYG Sbjct: 420 RINSYLGTEITDEEVQEIFDALGFGHRQEADSYIISVPPRRWDITIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ P L Q E +L+ Q TR V+ +L + E ++++ ++E++ F Sbjct: 480 DRL---PSTLPQGETVAGHLTKAQRLTREVRTLLEGNGVSEAISYALTTEEKAQQFTDKS 536 Query: 529 RELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ L+ P++ + + +R +L+ GLL N+ R A++E+ V+ T + + + Sbjct: 537 SQVTRLDWPMTEERAVLRLNLISGLLDDVAYNLARKNNRVALYEIGRVF-YQTGDSKHEL 595 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPS 646 + G+ +G + + + + VD F K ++ + D +R++ + A Sbjct: 596 PTEVNH--LGLALTGNIHEKDWQTQAQKVDFFHLKGILENLFDSLALTDRIRYQKTAAIK 653 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ +I + + G+ G+ HP+I + +S E Y+ + + Q KT++ Sbjct: 654 EMHPGRTAMILLDDQEI-GFLGQVHPSIAKDYEVS------ETYVAELNLDQLLAAKTEQ 706 Query: 707 VVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 +V+ +S V RD+A ++D+ I +++ II+ + R + + +FDV+QGK++ GKK Sbjct: 707 LVYQPVSKFPSVTRDMALLLDETIDNQSVMEIIRESAGRFLSAIRLFDVYQGKNIEAGKK 766 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+ + + T D++I + +I N+ +K A +R Sbjct: 767 SLGYSLTFSNPEATLTDEEINQAIAKITRNLEEKVQAEIR 806 >gi|168492741|ref|ZP_02716884.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] gi|183576918|gb|EDT97446.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC3059-06] Length = 800 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 248/825 (30%), Positives = 428/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGE-EERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 119 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 178 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 179 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 235 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 355 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 415 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 474 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 475 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 529 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 530 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 641 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + + VLG+ G+ HP + + E+ L +I + + Sbjct: 642 ATSEIASLHPGRTAVI-SFGDQVLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 700 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 756 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 800 >gi|189466097|ref|ZP_03014882.1| hypothetical protein BACINT_02467 [Bacteroides intestinalis DSM 17393] gi|189434361|gb|EDV03346.1| hypothetical protein BACINT_02467 [Bacteroides intestinalis DSM 17393] Length = 820 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 253/837 (30%), Positives = 419/837 (50%), Gaps = 51/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ E++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVDFDLTPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPADAAPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K ++ P S E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNNKPTSLKRPSVDTFSVENNDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIEGGEVVVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDGVERKLSDRDLMICDKEKPMCIAGVFGGLDSGSTETTKDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV ++ E V L G +P+E I+ L + E + ++VP +R DV+ D++E Sbjct: 417 IVELSYEKVYSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+S D++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 GYYDGMETYPSKNLVMLLNPLSTDLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCY 593 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSV 628 E PE K +AA G+ +G+ W+ EE +++ KA ++ Sbjct: 594 YFDAEKKNPE--KSLAAYTENYHLGLWVTGKKVSNSWAHADEES----SVYELKAYVENI 647 Query: 629 IEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +++ +L + Y S ++T L FG IL F + N + + Sbjct: 648 FLRLGLNMRNLVVGNLVDDIYATALS--VQTKGGKRLATFGIVTKKILKAFDIDNEV--Y 703 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 L+ + + R+ +S VKRDLA ++D+ + + I + +L+ + Sbjct: 704 YADLNWKELMKAIRSVKISYTEISKFPAVKRDLALLIDKKVQFAEIEKIAYETEKKLLKE 763 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K +A LR Sbjct: 764 VSLFDVYEGKNLEAGKKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLDAKLR 820 >gi|306830146|ref|ZP_07463330.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] gi|304427672|gb|EFM30768.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus mitis ATCC 6249] Length = 801 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 245/822 (29%), Positives = 424/822 (51%), Gaps = 40/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D V +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIAVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEVAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMISELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAEAFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLQVTYTSTA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E+ L +I + + T Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQPAT- 702 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEG 761 V ++ V RD+A ++ I +V+ I+ V RL D+ +FDVF G+ LG G Sbjct: 703 --PFVEITKFPAVSRDIALLLKAEISHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLGLG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + Q +D+ D+++ M++I ++ +K +A +R Sbjct: 760 MKSMAYSLTFQNPEDSLTDEEVARYMEKIQTSLEEKVHAEVR 801 >gi|15902553|ref|NP_358103.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae R6] gi|116517104|ref|YP_816009.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae D39] gi|149005693|ref|ZP_01829432.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP18-BS74] gi|225856287|ref|YP_002737798.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae P1031] gi|237650146|ref|ZP_04524398.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974] gi|237821677|ref|ZP_04597522.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae CCRI 1974M2] gi|30316218|sp|Q8DQT6|SYFB_STRR6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15458082|gb|AAK99313.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae R6] gi|116077680|gb|ABJ55400.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae D39] gi|147762633|gb|EDK69593.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP18-BS74] gi|225725253|gb|ACO21105.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae P1031] gi|332077015|gb|EGI87477.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA17545] Length = 800 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 248/825 (30%), Positives = 427/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGE-EERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 119 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 178 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 179 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 235 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 355 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 415 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 474 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 475 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 529 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 530 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 641 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E+ L +I + + Sbjct: 642 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 700 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 756 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 800 >gi|188995908|ref|YP_001930160.1| phenylalanyl-tRNA synthetase subunit beta [Porphyromonas gingivalis ATCC 33277] gi|188595588|dbj|BAG34563.1| phenylalanyl-tRNA synthetase beta subunit [Porphyromonas gingivalis ATCC 33277] Length = 819 Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 254/836 (30%), Positives = 408/836 (48%), Gaps = 50/836 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + WL ++L +S ++I DTLTSIGLE VE+++ R L I VL+ E +P Sbjct: 1 MNISYKWLLEYLPCALSPQEIADTLTSIGLETGGVEEIETIRGGLRGLVIGHVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D G +Q+VCGAPNV G V A G+ + E + KIRG+E Sbjct: 61 NSDHLHITTVDVGADAPLQIVCGAPNVAAGQKVVVATVGTTLYHGEEEFAIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+CSE E+ + + I+ LP DAPVG ++Y + SD I+V +TPNR D Sbjct: 121 SFGMICSEVEIGVGSSNDGIIVLPSDAPVGMPAAEYYHVESDYCIEVDITPNRVDATSHY 180 Query: 173 GIALDLVAA-------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A DL A+ KL E+N L ++ I I+ + D++ C + +KG+ Sbjct: 181 GVARDLAASLKRNGVPAELKLPEVN----LPTDIIDSRIEVKVADATACPRYQGLVIKGI 236 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 +P W+R RL+A+GLR I+ +VDITNYV + G P H FD + I D + V+ G Sbjct: 237 TVRESPEWLRNRLQAIGLRPINNIVDITNYVLHEFGQPLHAFDLAFIKGDQVHVQTVAEG 296 Query: 285 EKILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + LD E L+ ++++I S+G +AG+ GG H+G + T D+ +E A ++P + Sbjct: 297 TPFVTLDGVERKLTAEDLMICDSNGDPMCVAGVFGGLHSGVTEKTKDIFLESANFNPTMV 356 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 R+ + LG+ TDS +RFERG+D + L+ SLIL + GG + KP + Sbjct: 357 RRTARRLGLNTDSSFRFERGLDPERTDWALRRAASLILEIAGGRLGGMTDVYPNPLKPHQ 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 I +V + G + E IL+ L + E D + VP +R DV D++EE Sbjct: 417 ICLSFEKVNSVIGRTIEPETVRSILDSLEIRISKEEDGVMTLEVPRYRTDVTRDVDVIEE 476 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 I+RIYG +Q++ + + + V L E++N S + Sbjct: 477 IMRIYGYNQVELTGYIRASLGHETETDRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYYE 536 Query: 523 LFGGGQREL--EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--- 577 RE+ E++NP+S +++ MR +LL G L+ N+ R +FE Y Sbjct: 537 GLKTHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLYLFEWGKCYRFHA 596 Query: 578 ----NDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVI 629 ++TP ++A GI G+ W+ E +F+ KA V+ Sbjct: 597 AKRTDETP-----LSAYAEDDRLGIWICGQRVHNSWAHPEEP----TSVFELKAVVEQVL 647 Query: 630 -EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + E+ Y +KT + +LG FG + F + P+ E Sbjct: 648 CRVGIETGAYTLETADNDLYASAME--VKTRSGKLLGTFGTVSTEQIKRFDIEQPVYFAE 705 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 + D++ +S+ R K + L VKRDLA ++D+ + + ++ + + +L+ V Sbjct: 706 LLWDAL-MSESARYKL-EARDLPRFPEVKRDLALLLDKAVSFAEIESLARGCEKKLLRRV 763 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK+L GKKS A+ ++ + T D I +M +I + +K A LR Sbjct: 764 ELFDVYEGKNLPAGKKSYAVSFFLRNDEKTLNDKQIEAIMAKIRTTLEQKLGAQLR 819 >gi|314936681|ref|ZP_07844028.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus hominis subsp. hominis C80] gi|313655300|gb|EFS19045.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus hominis subsp. hominis C80] Length = 800 Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 246/821 (29%), Positives = 421/821 (51%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V + + + +T G+EV + +D + + + V S E++PD D Sbjct: 1 MLISNEWLKDYVDAGVPAKDLAERITRTGIEVADIIDYSKDIKNLVVGYVTSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEELVQIVCGAPNVDENQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S D I P + G D L L+D I++ LTPNR+D + + Sbjct: 120 CSLQEIGVSSNVVPKDYENGIFVFPNEVTPGTDALDALYLNDQIMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + N + + S E+ +D+ ++ VK VR +P Sbjct: 180 GTAYEVAALYQAEMTKPNTTLNETETSATDELSVTVDNPEKVPYYSARVVKNVRIAPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD + S + VR+A E + LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHMGSKDIVVRQANENETMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E L ++VI + ++AG++GG + D T +V+VE A++DP++I + + L Sbjct: 300 DTERTLIDTDIVITNGKEPIALAGVMGGDFSEVTDQTMNVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ G +A+ ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVNEAVDRACYLLEHYASGEVLKDRVAQGDLGSLVTPIDITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ ++ I E+LGF I D V VPS R+D+ K DL+EEI RIYG D Sbjct: 420 VNQTIGFNLSNDEIKAIFEQLGFKTIQNADTLTVYVPSRRKDISIKEDLIEEIARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 I S LP+ L+ +Q +TR VK L + + + +S +SK+ + F +R Sbjct: 480 NIPS-TLPVFDDVTSGKLTDRQYKTRTVKETLEGAGLNQAITYSLVSKDHAKDFALQERP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 + +L P+S S +R SLLP L++AT NV R + ++E+ V+ +++ P+ + Sbjct: 539 TISLLMPMSEAHSTLRQSLLPHLIEATAYNVARKNKNVRLYEIGRVFFGNGKDELPDEIE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K EE +D F AK + I ++LD +++G Sbjct: 599 YL-SGILTGEYVV----NTWQGKKEE----IDFFIAKG-VVDRIAEKLNLD-FTYKAGEI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I+ + + G+ GE HP + L FE+ DS+ R Sbjct: 648 KGLHPGRTAIVSLEGKEI-GFVGELHPQLAAENDLKRTYV-FELDYDSM-----MRVAVG 700 Query: 706 KVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + + V RD+A V++ +P+ L++II +N + ++ + VFDV++G+ L EGK Sbjct: 701 YINYEPIPKFPGVSRDIAMEVNRDMPSSELLDIIHENGEDILKNTLVFDVYEGEHLEEGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVAI++ ++T D + + D+I+E +K A +R Sbjct: 761 KSVAIRLNYLDTENTLTDKRVSKVHDKILE-ALKAKGATIR 800 >gi|297195415|ref|ZP_06912813.1| phenylalanyl-tRNA synthetase subunit beta chain [Streptomyces pristinaespiralis ATCC 25486] gi|297152775|gb|EDY63123.2| phenylalanyl-tRNA synthetase subunit beta chain [Streptomyces pristinaespiralis ATCC 25486] Length = 854 Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 264/873 (30%), Positives = 412/873 (47%), Gaps = 99/873 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L + GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLIAAGLEVETVEQLGAGLKGPLVVGQVLTIEELT 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P + + RK Sbjct: 61 EFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GDFAIAARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP + VG LEL D ++D+++TP+R Sbjct: 118 TYGRTSHGMICSGDELGMGDDGSGGIIVLPPEHEVGTDAIKLLELVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + +RG+A + A L++ + S +K + D C F V G+ Sbjct: 178 ALSMRGVARETATAYGLPLRDPALLDVPGPNSYGYGVK--VADPVGCDSFTARTVVGLEP 235 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P W+++RL+ G+R IS VDITNYV L+ G P H +D SR+ + VRRA GEK Sbjct: 236 EARSPIWLQRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRSRLDGPIGVRRAEPGEK 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA-----------GCDDNTTDVLVEV 335 + LD L +++VI + +AG++GG + G + TT+V++E Sbjct: 296 LTTLDGTTRVLDAEDLVITDNRGPIGLAGVMGGANTEIADAAPDPETGRINGTTEVVIEA 355 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A +DP+ IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 356 AHFDPVAIARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEGGVTQV 415 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 PR I R++G+ E +R L+ +G V G+ D V+VPSWR D+ E Sbjct: 416 VAPSAPRTIAMPADHPDRVAGVTYGRETVVRRLQEVGCDVYGQ-DDLVVTVPSWRPDLAE 474 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S L R L+ +Q R V R LA +E N+ F Sbjct: 475 PNDLAEEVIRLEGYENLPST---LPTPPSGRGLTARQRLHRRVGRALAGAGYVEAPNYPF 531 Query: 516 ISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I + G +R ++++NP+S + +RT+LLPGLL A RN R D A+F Sbjct: 532 IGEPVLDQLGLDADDARRRVVKLVNPLSDEEPALRTTLLPGLLGALRRNDGRGSHDLALF 591 Query: 571 EVSHVYENDTPEGQKYMA--------------------------------AGIRKGSSGI 598 E V+ P G++ A AG R+ G Sbjct: 592 ETGLVFR---PTGEERPAVTPPVDRRPTDEEIASLNAALPRQPRRVAVVLAGARE-QDGW 647 Query: 599 EGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G GR W+D E A L E V L ++R + AP +HPGR + Sbjct: 648 WGKGRPADWADAIE------------AGRLVAREAGVEL-TVRADQHAP--WHPGRCAAL 692 Query: 657 KTSA---EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + E ++G+ GE HP ++ L + C E+ LD + ++ T + +S+ Sbjct: 693 YATVDGEETLVGHAGELHPRVVKALHLPDRTCAMELELD---VLEQASTGVVQAPRISTF 749 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A +V +PA + + ++ L++ + +FDVF G+ +GEG KS+A + + Sbjct: 750 PVATQDVALVVANDVPAADVESALREGAGELLESIRLFDVFTGEQIGEGSKSLAYALRFR 809 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T D+ D V ++T AVLR + Sbjct: 810 AADRTLTVDEASAARDAAVSLATERTGAVLRGA 842 >gi|322389884|ref|ZP_08063425.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] gi|321143465|gb|EFX38902.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus parasanguinis ATCC 903] Length = 801 Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 421/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK +D DV E++ + +++ G+EVE V++ LS + +VLS E P+ Sbjct: 1 MLVSYKWLKQLVDVDVPSEELAEKMSTTGIEVEGVESPATGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETDQVAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ + +T V++E A+++ +I ++ Sbjct: 296 LDGEERELETSDLVITVADKPVALAGVMGGEATEISEKSTRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVLKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 VDVNRVLGTELSYADVEDVFRRLGFGLSGNAESFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP T +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDK-----LPATLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T + Sbjct: 531 TAPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L V+ + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTPAVPVDFFYAKG-ILEVLFTRLGLEVTYTATQ 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ ++ + V+G G+ HP + + E Y+ + +S + Sbjct: 646 EIKSLHPGRTALLSLGDQ-VIGVLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAAFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|315444452|ref|YP_004077331.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium sp. Spyr1] gi|315262755|gb|ADT99496.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium sp. Spyr1] Length = 832 Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 249/826 (30%), Positives = 410/826 (49%), Gaps = 86/826 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL+D + DVS E++ IG EVE++ ++ P T+ +V+ +E Sbjct: 1 MRIPYSWLRDTVQAGAPGWDVSPEELEQAFIRIGHEVEEIIPAGPVTGPLTVGRVVEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQ----EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + I +++D G +VCGA N VG L V A PG+ +P + + RK Sbjct: 61 LTEFKKPIRAVKVDVGSENVAGAPRDIVCGATNFAVGDLVVVALPGAVLP-GDFAIATRK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R Sbjct: 120 TYGRTSDGMICSVSELNLGSDHSGILVLPPGTAEPGTPAAGVLGLDDVVFHLAITPDRGY 179 Query: 168 CIGVRGIALDLVAA-GLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 C+ VRG+A ++ A L +++ P E++P+ I D + + F + V G+ Sbjct: 180 CLSVRGLAREIANAFDLDYTDPADVAPLPAEGEALPVTI----DPGTGVQRFGLRPVTGI 235 Query: 226 -RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+P W+++RL G+R+IS VD+TNYV L+ G+P H D S I+ VR A Sbjct: 236 DPKAVSPWWLQRRLLLSGIRAISPAVDVTNYVMLELGHPMHAHDRSLITGGFRVRFAEPA 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E ++ LD+ E L +V+I D +I G++G D+TTDVL+E A+WDP ++ Sbjct: 296 ETVVTLDDVERTLDTVDVLIVDDAATAAIGGVMGAGTTEVRDSTTDVLLEAAVWDPAAVS 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITY 399 R+ + L + +++ R+ER VD + L +L+ + GGT + Sbjct: 356 RTQRRLRLHSEAGRRYERTVDPAISVAALDRCATLLADIAGGTVQPTLTDWRGDPPRDDW 415 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 P + R +G++ P + + L ++G V+ E + + PSWR D+ + ADL Sbjct: 416 SPAPVSMPVDLPDRTAGVEYPQGAAQKRLTQIGADVVVEGELLTATPPSWRPDIRQPADL 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK- 518 VEE++R+ G+D I S L R L+ Q R R + + LA +E++ F+ Sbjct: 476 VEEVMRLEGLDVIPSV---LPTAPAGRGLTATQKRRRAIGKSLALSGFVEILPTPFLPAG 532 Query: 519 --EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +Q L +R +LNP+ AD ++ T+LLPGLL+A RNV R D A+F + Sbjct: 533 IFDQWGLDADDRRRDTTTVLNPLEADRPSLATTLLPGLLEALARNVSRGAVDVALFAIQQ 592 Query: 575 VYE------------NDT--------------PEGQKYMAA---GIRKGSSGIEGSGRLW 605 V E ND P +++AA G+R+ +G G+GR Sbjct: 593 VVEPTSETRAVERIPNDRRPTDDEIAVLDASLPHQPQHVAAVLTGLRE-PAGPWGAGR-- 649 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVL 664 R D F +A+ VI V +D +LR + P +HPGR + ++V+ Sbjct: 650 ------RVEAADAF----EAVRVIGRAVGVDFTLRADQTLP--WHPGRCAAVLIG-DVVV 696 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ G+ HP +++ GL C E+ LD++P+ T+T +S V +D+A IV Sbjct: 697 GHAGQLHPAVVERSGLPKGTCAVEIDLDAVPL-----TETLPAPRVSPFPAVFQDVALIV 751 Query: 725 DQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 + A ++V+ ++ L++DV +FDV+ G +G+G++S+A+ + Sbjct: 752 GDDVSAQSVVDAVRAGAGELLEDVRIFDVYTGPQIGDGRRSLALAL 797 >gi|229019784|ref|ZP_04176587.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1273] gi|229026011|ref|ZP_04182395.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1272] gi|228735292|gb|EEL85903.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1272] gi|228741509|gb|EEL91706.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1273] Length = 806 Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 238/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 IWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + ++T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNDTVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV V+ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSVFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPETEKQIDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|306831077|ref|ZP_07464238.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|304426643|gb|EFM29754.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus gallolyticus subsp. gallolyticus TX20005] Length = 801 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 253/839 (30%), Positives = 420/839 (50%), Gaps = 74/839 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + E L+ + V+S E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSTSSEGLTKLVVGHVVSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEELRQIVCGAPNVTAGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKELKEVSKAAKDVINVAI-----ESDKVLTYKARVVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ D + R A +GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNAHAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI + ++AG++GG+ DDN+ +V++E A++D +I ++ Sbjct: 294 VTLDGEERELIAEDLVITVADKPVALAGVMGGQATEIDDNSKNVVLEAAVFDGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 L + ++S RFE+G++ + L +++ L G D+ R P + V Sbjct: 354 GRLNLRSESSSRFEKGINYATVAEALDFAAAMLTELADG---DVLAGRVEAGSVPTEDVE 410 Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +++ + ++ G ++ D + +LGF + G DKF VSVP R D+ +ADLVEEI Sbjct: 411 VSTTLDYVNVRLGTELTYADIEDVFAKLGFGLSGNADKFTVSVPRRRWDIAIQADLVEEI 470 Query: 464 LRIYGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 RIYG D LP T E L+ Q R ++ + + E+V+++ + E+ Sbjct: 471 ARIYGYDN-----LPTTLPEAAGTAGELTATQKLRRKMRSIAEGAGLTEIVSYALTTPEK 525 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN- 578 + F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ V+E Sbjct: 526 ATEFTLQPSNLTELMWPMSVERSVLRQNVVSGMLDTVAYNVARKNSNLAIYEIGKVFEQK 585 Query: 579 -----DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-F 632 + P A I SG + + + VD F AK ++E F Sbjct: 586 GNPKEELPNEVSTFAFAI---------SGLVAEKDFQTKATPVDFFYAKG----IVEAIF 632 Query: 633 VSLD---SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 LD E G S HPGR+ I ++V G+ G+ HP + + E+ Sbjct: 633 AKLDLTVDYVAEKGLASM-HPGRTASIYLDGQLV-GFVGQVHPQTAKNYNVPETYVA-EL 689 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT-----LVNIIKNVDRLI 744 LD I + K V ++ V RD+A + +PA T L I + + Sbjct: 690 NLD---IIEAALHADKAFVEITKFPAVSRDIALL----LPAATTHKEILAAIESAKVKRL 742 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+ +FDV+ G ++ EG KS+A + Q D D+++ MD+I + +V + A +R Sbjct: 743 TDIKLFDVYAGANIAEGMKSMAYSLTFQNPNDNLTDEEVAKYMDKITKVLVDQLGAEVR 801 >gi|229163551|ref|ZP_04291501.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus R309803] gi|228619933|gb|EEK76809.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus R309803] Length = 806 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I+ ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAINLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAQYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|294501478|ref|YP_003565178.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus megaterium QM B1551] gi|294351415|gb|ADE71744.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus megaterium QM B1551] Length = 804 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 244/825 (29%), Positives = 413/825 (50%), Gaps = 42/825 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D + V+ E++ D +T G+EVE V+N + +S I V+ E++P+ Sbjct: 1 MFVSYRWLQEYVDLSGVTAEELADKITKSGIEVEGVENLNKGISGVVIGHVVEREQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G + +Q+VCGAPNV G A G+ +P N + K+RG ES GM Sbjct: 61 DKLSRCQVDLGGGEIVQIVCGAPNVAQGQKVAVAKVGAVLP-GNFKIKRAKLRGEESNGM 119 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS E +L+ D I P DA VG D L L+D ++++ LTPNRSDC+ + Sbjct: 120 ICSLQELGIESKLVAKDYQEGIFVFPSDAEVGADALDALNLNDEVLELGLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K +++ S E I ++ + VK V+ +P Sbjct: 180 LGVAHEVAAILRREVKYPSVNVQTSDEQAADYISVKVEAKEDNPLYVARVVKNVKIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VR A GEK + L Sbjct: 240 LWMQTRLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRHASEGEKFVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L + +VI + ++AG++GG ++ D+T +VL+E A + + + ++ K+ Sbjct: 300 DDQERVLKGNQLVITNGSEPVALAGVMGGANSEVKDDTVNVLIESAYFKGLTVRQASKDH 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNS 409 G+ +++ RFE+G+D L+ G S +T +P + Sbjct: 360 GLRSEASARFEKGIDPNRTRVAADRAAELMAEYASGEVVSGTVEVDTLTVEPAVVAVSLG 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G ++ +E+ I+ RL F E + V+VP+ R D+ + D+VEE+ R+YG Sbjct: 420 RINDVLGTELSMEEVQDIMNRLQFENKVEDETIVVTVPTRRGDITIEEDIVEEVARMYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQ 528 D + + LP+T V L+ Q R V+R L + + +S S ++ F Sbjct: 480 DNLPT-TLPVT-VATPGKLTEYQLGRRKVRRFLEGAGLAQTTTYSLTSAGKATQFALNAT 537 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 + + P+S D S +R SL+P LL+A N R A++E V+ E + P+ Q Sbjct: 538 STIGLAMPMSEDRSILRQSLVPHLLEAVKHNNARQSDSIALYETGSVFLSKGEGELPDEQ 597 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESG 643 + +A I +G + + + VD + K V+E F L + S Sbjct: 598 ERVAGAI---------TGLWHAHGWQGEKKVVDFYVIKG----VLEGLFAQLGLEKRISY 644 Query: 644 AP---SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 AP HPGR+ + E +GY G+ HP + +GL FE++L + + + Sbjct: 645 APVKKDGMHPGRTAAVWLD-EKEIGYVGQVHPVVQKQYGLRETYV-FELHLQELLAADVE 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 + + S + RD+A +VD+++ G + +I L+ DVTVFD+++G+ + Sbjct: 703 EVRYSAIPRFPS---ITRDIALVVDKNVLGGEVQRVIYAAGGELLKDVTVFDLYEGERME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EGKKSVA + + T D+++ ++E V K+ A LRS Sbjct: 760 EGKKSVAFSLRYLDPERTLTDEEVAKAHGAVLEAVEKEFGATLRS 804 >gi|238927100|ref|ZP_04658860.1| phenylalanyl-tRNA synthetase subunit beta [Selenomonas flueggei ATCC 43531] gi|238885080|gb|EEQ48718.1| phenylalanyl-tRNA synthetase subunit beta [Selenomonas flueggei ATCC 43531] Length = 811 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 255/838 (30%), Positives = 420/838 (50%), Gaps = 63/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D D + E+I D LT G+ VE V + L ++ + +PD D Sbjct: 1 MQVSIKWLKDYVDIDETAEEIADRLTMAGVPVEHIVRADKGLEKVITGRIEKITPHPDSD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G +Q+V GA NVR G + A G+ +P+ I + K+RG+ S GMM Sbjct: 61 HLLVCQLNMGGDALLQIVTGAQNVREGNVVPVAMVGAVLPDGKKI-SKGKLRGVVSNGMM 119 Query: 119 CSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + + I LP D PVG + L L D +++ LT NR+DC V Sbjct: 120 CSAGELAMDIEGLPDEQVHGIYILPPDTPVGIPAAQVLGLDDVVLEFELTANRADCFSVI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A KL+ +I S+ + + +DD LC+ F+ ++ V+ P Sbjct: 180 GIAREVAALTGRKLRMPSIEVQESAGVRAADLVSIHIDDKELCRRFSARVLRDVKVAPTP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 WM RL+ G+RSI+ +VD+TN+V L+ G P H +D RI+ LT RRA +GE++ L Sbjct: 240 AWMVDRLRGAGIRSINNVVDVTNFVMLELGQPLHAYDYDRIAGHTLTARRAHAGEQLHTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ D +VIA + +AGI+GG + D TT V++E A + I R+ + + Sbjct: 300 DDSNRIAVGDELVIADSEKPTGLAGIMGGLISEVTDATTAVVLEAASFHGATIRRTARRI 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ +++ RFERGVD I + L+ + TA++ I +I PR + Sbjct: 360 GLHSEASGRFERGVDETETIRAVTRAAQLLAEMGACTAAEGTI--DIYPAPRVPTVLTFS 417 Query: 411 VKRLS---GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRI 466 V+ ++ G +P E L LGF++ + + + V VPSWR DV D+ EE+ R+ Sbjct: 418 VRAVAERIGAHIPGEWMASALRSLGFTIEEQGGETYRVVVPSWRGDVTLMEDISEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ------ 520 YG D I S+ +P V + ++S Q+ ++ AS M E +++SF S+ Sbjct: 478 YGFDNIASK-MPSGAVL-QGSVSEMQAFVDTMRETFASLGMTEELSFSFTSETALDKLCV 535 Query: 521 ---SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 S L +R + I+NP++ + +RT+LL +L+ RNV R D +F+++ V+ Sbjct: 536 PMDSPL----RRAIPIMNPLTDEYPLVRTTLLTSILENAARNVARKNLDLRLFDIAPVF- 590 Query: 578 NDTPEG--------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 P+ +K AAG+ G S W + VD +DAK V+ Sbjct: 591 --FPKALPLTELAEEKLKAAGLLTGRR----SPIAWDTDNT----VVDFYDAKG----VL 636 Query: 630 EPFVSLDSLR---FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 E F+++ ++ E G HPG++ K + V+ GE HP + FG+ + Sbjct: 637 ERFLTVIGVQKYTVERGEHFAMHPGKTAFFKKGRD-VIAVLGEIHPTVAANFGIGQNVYV 695 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLID 745 FE+ +++ ++K++ K L RDLA IVD + + +I K + Sbjct: 696 FEMDAETLLRYRRKKSTIKP---LPKYPASARDLAIIVDADLTTAEIERVIAKKGGKYFR 752 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 T+FD++ GK +GEGKKS+A + Q T D+++ I++ V ++ +A LR Sbjct: 753 HATLFDIYAGKQVGEGKKSMAFHLHFQSDDKTLTDEEVDAAFAAILQAVEEQLHAQLR 810 >gi|319946637|ref|ZP_08020871.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] gi|319746685|gb|EFV98944.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus australis ATCC 700641] Length = 801 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 424/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV ++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSLELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEGEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPQDAIPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ S + L + D D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKDFALTETDQSAADALSVSIDTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W+ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLHNLLMNEGIRPINNIVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ ++++ V++E A+++ +I ++ Sbjct: 296 LDGEERELETSDLVITVADKPVALAGVMGGQATEISESSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAEAFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R D A++E+ V+E T + Sbjct: 531 TAPSNLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKDLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EDLPNEINSFAFALTG---LVAEKDFQTPAVPVDFFYAKG-ILEALFARLGLEVTYTATS 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I ++V G+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTALISLGDQVV-GFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDIALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 VGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|121591687|ref|ZP_01678919.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] gi|121546455|gb|EAX56682.1| phenylalanyl-tRNA synthetase, beta chain [Vibrio cholerae 2740-80] Length = 632 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 221/647 (34%), Positives = 341/647 (52%), Gaps = 38/647 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L L+D IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLNDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ + C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIVATINDTISIDVKAPAACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + +L G +P D + ILERLG V + ++ + P+WR D+ + DLVEE+ RIYG + Sbjct: 413 LDKLLGHAIPDADVVEILERLGMQVETTAEGWQATAPTWRFDIAIEQDLVEEVGRIYGYN 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGG 527 I ++ P+ + N++L +KRV L R E + +SF+ EQ L G Sbjct: 473 NIPNQA-PVAAL----NMNLHNEAKLPLKRVRDLLVDRGYQEAITYSFVEPEQQKLVVPG 527 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---- 583 L + NPISA+MS MR SL+ GLL N R +FE + D Sbjct: 528 VDALILPNPISAEMSAMRLSLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPDAAAENGMR 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 Q+ M AG+ G+ G E W+ ++ VD FD K D +V+E Sbjct: 588 QEPMLAGVISGARGEEH----WNMETAT----VDFFDMKGDLEAVLE 626 >gi|229543610|ref|ZP_04432670.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus coagulans 36D1] gi|229328030|gb|EEN93705.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus coagulans 36D1] Length = 804 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 243/826 (29%), Positives = 431/826 (52%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL++++D D +S E++ + +T G+EVE V + E + + VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLDGISPEELAEKITRTGIEVESVAFKGEGIKNVVVGHVLEKEKHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G+ + +Q++CGAPNV G A PG+ +P ++ + K+RG ES Sbjct: 61 DKLNKCLV---DIGEGEPVQIICGAPNVDKGQKVAVAKPGAWLP-GHVKIKRSKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P D VG + L L D II++ LTPNR+DC Sbjct: 117 NGMICSLQELGVESKLVQKEYANGIYVFPDDVEVGKDVLPLLGLDDTIIELGLTPNRADC 176 Query: 169 IGVRGIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + + G+A + VAA LGK L E + + + ++ + +++ + + ++ V Sbjct: 177 MSMLGVAYE-VAAILGKDVKLPETKVQEASDKAADAISVRVEAKEAAPL--YTLKVIRNV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 + +P WM+ RL A G+R + +VDITNY+ L+ G P H FD ++ S + VR A G Sbjct: 234 KIGPSPLWMQARLMAEGIRPHNNVVDITNYILLEYGQPLHAFDYDKLGSKEIVVRMAREG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EK++ LD+QE L ++VI + ++AG++GG ++ + TT+VL+E A +D I Sbjct: 294 EKMVTLDDQERTLKDVHLVITNGTEPVAMAGVMGGANSEVSETTTNVLLESAYFDAGTIR 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRK 403 + K+ G+ +++ R+ERG+D ++P + LI GG +A N + +P Sbjct: 354 TASKDHGLRSEASSRYERGIDPNRVVPAAERAAMLIAKYAGGEVLAGMVAENHLHIEPAV 413 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++ R+ G + E+ LRI +RL F E +F V VP+ R D+ + DL+EE+ Sbjct: 414 VTITLEKINRVLGTQISAEEVLRIFKRLQFETSWEDGRFTVIVPTRRGDITIEEDLIEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+YG D + + LP + + L++ Q + R KR L + + +S S+E++ Sbjct: 474 ARLYGYDLL-PKTLPAGR-GTRGGLNVIQQKRRATKRFLEGTGLYQATTYSLTSEEKAHQ 531 Query: 524 FGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 + +RE + + P+S + S +R SLLP LL++ NV R A++EV +V+ + Sbjct: 532 YALEKREPVRVAMPMSEERSVLRLSLLPHLLESVAYNVARKNESVALYEVGNVFLKKADG 591 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 PE Q+++A I +G+ S LW + + VD F AK + E ++ Sbjct: 592 AQPEEQEHLAGAI----TGLWVS-NLWQGEK----KAVDFFVAKGILEGLFEKLGVSGAI 642 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + + HPGR+ I E +G+ G+ HPN+ + FE+ L+ + Sbjct: 643 SYHAATFEGLHPGRTAEILLDGE-AIGFVGQVHPNVQKELDIKETYV-FELKLEPVYHYP 700 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + + + + + + RD+A +VD+ + A L II+ L+ V++FD+++G+ Sbjct: 701 AEPVQYRPIPRFPA---ITRDIALVVDRDVEAARLQAIIQEAGGTLLKSVSIFDLYEGEH 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + KKS+A + + T D+++ ++++ V +K AVLR Sbjct: 758 MEPDKKSIAFSLTYFDPERTLTDEEVVAQHEKVLAAVKEKAGAVLR 803 >gi|325977973|ref|YP_004287689.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|325177901|emb|CBZ47945.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 801 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 253/839 (30%), Positives = 419/839 (49%), Gaps = 74/839 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E L+ + V+S E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSTPSEGLTKLVVGHVVSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEELRQIVCGAPNVTAGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKELKEVSKAAKDVINVAI-----ESDKVLTYKARVVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ D + R A +GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNARAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI + ++AG++GG+ DDN+ +V++E A++D +I ++ Sbjct: 294 VTLDGEERELIAEDLVITVADKPVALAGVMGGQATEIDDNSKNVVLEAAVFDGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 L + ++S RFE+G++ + L +++ L G D+ R P + V Sbjct: 354 SRLNLRSESSSRFEKGINYATVAEALDFAAAMLTELADG---DVLAGRVEAGSVPTEDVE 410 Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +++ + ++ G ++ D + +LGF + G DKF VSVP R D+ +ADLVEEI Sbjct: 411 VSTTLDYVNVRLGTELTYADIEDVFAKLGFGLSGNADKFTVSVPRRRWDIAIQADLVEEI 470 Query: 464 LRIYGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 RIYG D LP T E L+ Q R ++ + + E+V+++ + E+ Sbjct: 471 ARIYGYDN-----LPTTLPEAAGTAGELTATQKLRRKMRSIAEGAGLTEIVSYALTTPEK 525 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN- 578 + F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ V+E Sbjct: 526 ATEFTLQPSNLTELMWPMSVERSVLRQNVVSGMLDTVAYNVARKNSNLAIYEIGKVFEQK 585 Query: 579 -----DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-F 632 + P A I SG + + + VD F AK ++E F Sbjct: 586 GNPKEELPNEVSTFAFAI---------SGLVAEKDFQTKATPVDFFYAKG----IVEAIF 632 Query: 633 VSLD---SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 LD E G S HPGR+ I ++V G+ G+ HP + + E+ Sbjct: 633 AKLDLTVDYVAEKGLASM-HPGRTASIYLDGQLV-GFVGQVHPQTAKNYNVPETYVA-EL 689 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT-----LVNIIKNVDRLI 744 LD I + K V ++ V RD+A + +PA T L I + + Sbjct: 690 NLD---IIEAALHADKAFVEITKFPAVSRDIALL----LPAATTHKEILAAIESAKVKRL 742 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+ +FDV+ G ++ EG KS+A + Q D D+++ MD+I + +V + A +R Sbjct: 743 TDIKLFDVYAGANIAEGMKSMAYSLTFQNPNDNLTDEEVAKYMDKITKVLVDQLGAEVR 801 >gi|296135850|ref|YP_003643092.1| phenylalanyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] gi|295795972|gb|ADG30762.1| phenylalanyl-tRNA synthetase, beta subunit [Thiomonas intermedia K12] Length = 813 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 271/839 (32%), Positives = 415/839 (49%), Gaps = 63/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWL+ + D+S E + DTLT GLEVE+V A S + V V+ +P+ D Sbjct: 1 MQFPESWLRQFCNPDLSTEALADTLTMAGLEVEEVQAAAPAFSGVVVGLVRDVQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP-----ENNMIVNVRKIRGIE 113 + ++D G Q +Q+VCGAPNV VG+ A G+ +P + + K+RG+E Sbjct: 61 KLRVCQVDVGAAQWLQIVCGAPNVAVGMAAPCALVGAELPPQQEGQGAFRIGPAKMRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL LS D A ++ L G L ++L L + + + LTPN C+ + G Sbjct: 121 SQGMLCSARELGLSADHAGLLALQGAPQAGADLREWLSLDEAVFTIKLTPNLGHCLSIIG 180 Query: 174 IALDL--VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 +A ++ V + P ++ +P+ I + LC F+ ++GV Sbjct: 181 VAREVSAVTGAVFHRPTFRPVAPTLADRLPVSI----EAPDLCGRFSGRIIRGVNARAET 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+ RL+ G RSISALVDI+NYV L+ G PSHVFD ++I LTVR A GE++ L Sbjct: 237 PQWMKTRLERSGQRSISALVDISNYVMLELGRPSHVFDLAKIRGGLTVRWAREGEQLELL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + Q LS D VIA++ ++S+AGI+GG+ NTTD+ +E A W P I + L Sbjct: 297 NGQTISLSADMGVIAAENGVESLAGIMGGESTAVTLNTTDIYLEAAFWWPDAIRGRARRL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMN- 408 TD+ RFERGVD + L I +LIL +CGG A IT P RK V M Sbjct: 357 NFSTDAAARFERGVDYATTVEHLDAITALILDICGGQAGP--ADDQITQLPQRKPVRMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW-------RQDVEEKADLVE 461 + +++ GI + + I RLG E D+ + P+W R D+E + DL+E Sbjct: 415 ARCEKVIGIPIGSDRMGEIYSRLGLQA--ELDR-NSTEPAWIVTPGAERFDLEIEEDLIE 471 Query: 462 EILRIYGVDQIKSE-------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 E+ RI+G I ++ PLP+ E +R L + +T A+ E +N+S Sbjct: 472 EVARIHGYQHIPTQAPVARLHPLPVP--EGQRTLHSLRLKT-------AALGYQETLNFS 522 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+ + F G + +LNPI++ MS MR++L+ L+K N++ +FE+ Sbjct: 523 FVDAQSEQDFAGQADPIRLLNPIASQMSVMRSTLIGSLVKVLADNLNHRAKRVRLFELGR 582 Query: 575 VYENDT-PEGQKYMAAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE- 630 V+ D E AGIR+ +G+ G + + E R VD +D KAD ++ E Sbjct: 583 VFARDAQAENGPMQVAGIRQPMRLAGL-AYGSVVPVQWAEPERRVDFYDMKADVEALCEG 641 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 L++ HPGRS ++ E LG GE HP + + L FE Sbjct: 642 SGEGTGELQWMPVQHPALHPGRSAEVRLGGE-RLGVVGELHPQWVQRYHLQFAPVIFE-- 698 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN------VDRLI 744 LD+ + Q +R V ++ + V+RDLAF V + + ++ V +I Sbjct: 699 LDA-GLLQAQRLPV--FVPINRVPAVQRDLAFQVPSGVSYAQMQQAVQTAIQNIPVCGII 755 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FD+F KS+A ++ +Q + T D+ + +V + T A LR Sbjct: 756 REVRLFDLFTPPG-DTTSKSMAFRLQLQD-QQTLTDERVDAACQALVAELATATGAQLR 812 >gi|333030614|ref|ZP_08458675.1| Phenylalanyl-tRNA synthetase beta chain [Bacteroides coprosuis DSM 18011] gi|332741211|gb|EGJ71693.1| Phenylalanyl-tRNA synthetase beta chain [Bacteroides coprosuis DSM 18011] Length = 820 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 258/848 (30%), Positives = 421/848 (49%), Gaps = 73/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M + +WLK+++D D+S E++ LTS GLE+ +V+ E+ L + KVL+ +P Sbjct: 1 MNVSYNWLKEYVDFDLSPEELAAALTSTGLEIGEVEEVESIKGGLEGLVVGKVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 D D I +D GK + +Q+VCGAPNV G V A G+ + +N+ + K+RG+E Sbjct: 61 DSDHLHITTVDLGKGEPVQIVCGAPNVAAGQKVVVATLGTVLYDGDNSFKIKKTKMRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+CSE E+ + DS I LP P G +Y + SD +++V +TPNR+D Sbjct: 121 SLGMICSEVEIGVGSDSDGITVLPESVPAGTPAKEYYNVKSDYVLEVDITPNRADGCSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVKG 224 G+A D+ A LK+ I L + L+I ++++ C +A + G Sbjct: 181 GVARDIYAY----LKQNGIVATLHKHDVKNFEVDNHNLDINVKVENTKACIRYAGLSMTG 236 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACS 283 V +P W+++RL ++G+R I+ +VD+TNY+ G P H FDA I+ + V+ Sbjct: 237 VTVKESPEWLKERLNSIGVRPINNVVDVTNYILFAYGQPLHCFDADMITTKTVEVKTLPE 296 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 G + LD QE LS +++I + IAG+ GG +G + TT++ +E A + P + Sbjct: 297 GTPFVTLDEQERKLSDKDLMICNGNEPMCIAGVFGGLKSGATEKTTNIFIESAYFHPTWV 356 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPR 402 ++ + G+ TD+ +RFERGVD +I L+ LI L GG +S+I + Sbjct: 357 RKTARRFGLNTDASFRFERGVDPNAVIYCLQLAAILIKDLAGGQVSSEIKDFYPTPIEDF 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVE 461 ++ ++ RL G ++P + LRI+ L V+ + + ++VP +R DV D++E Sbjct: 417 RVKLNFDKMNRLVGKEIPTDTVLRIVTSLEMKVLEQSAEGLTLAVPPYRADVHRDVDVIE 476 Query: 462 EILRIYGVDQIK---SEPLPLTQV-EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 +I+RIYG + I+ S L L+Q E+ R+ LQ + L E++N S Sbjct: 477 DIMRIYGYNNIEISTSLKLSLSQKGEEDRSNKLQN----LISEQLVGCGFNEIMNNSLT- 531 Query: 518 KEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S L+ +R + +LNP+S+D+++MR +LL G L + RN +R AD FE Sbjct: 532 --RSALYEDFKRFPAENLVMMLNPLSSDLNSMRQTLLFGGLSSISRNANRRNADLKFFEF 589 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSG------IEGS--GRLWSDKSE-----ERCRFVDLF 619 + Y D E +K G+ S G + G W+ E E +VD Sbjct: 590 GNCYFFD--ESKKSEGKGLAPYSEGYRLGMWVTGKRVANSWAHPDEDSSVYELKAYVDNV 647 Query: 620 DAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 A+ A A V E F D L SG H G+ +L FG + Sbjct: 648 FARLGLAKAAMVEEVFS--DEL-MASGLAYSTHGGK----------LLAVFGVITKKVTK 694 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 F + N + E D + + +K K L V+RDLA ++D+ + + + Sbjct: 695 GFDIDNEVYYAEFNWDELMKATRKNEINFK--ELPKYPAVRRDLALLLDKSVLFSDIEKV 752 Query: 737 -IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 K+ +L+ V++FDV++G L GKKS A+ ++Q T D I +M ++++N+ Sbjct: 753 AFKSERKLLKSVSLFDVYEGNKLEAGKKSYAVCFMLQDESKTLNDKSIDKVMTKLIKNLE 812 Query: 796 KKTNAVLR 803 K+ A LR Sbjct: 813 KELGAQLR 820 >gi|317129875|ref|YP_004096157.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cellulosilyticus DSM 2522] gi|315474823|gb|ADU31426.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cellulosilyticus DSM 2522] Length = 806 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 237/827 (28%), Positives = 418/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WLKD+++ D ++ +++ + LT G+EV+ V + + + KV+ E++P+ Sbjct: 1 MLVSYKWLKDYIEIDDLTPQEVAEKLTRSGVEVDIVHAMNQGVKNIVVGKVVDCEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + Q+VCGA NV G V A G+ +P + + K+RG S GM Sbjct: 61 DKLNLCQVDIGEEELTQIVCGAANVGKGQYVVVAKVGARLP-GGVKIKRAKLRGQTSEGM 119 Query: 118 MCSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + + I P + P G L L D ++++ LTPNR+DC+ + Sbjct: 120 ICSLQELGFEGKTVAKEYAEGIYNFPTELPPGTDAIPLLNLDDHVLELDLTPNRADCLSL 179 Query: 172 RGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + V A LG+ +K S +SE I ++D + + +K V+ + Sbjct: 180 LGVAYE-VGAILGRDVKLPRFSVNEASEKADEYISVNVDAKTDSPYYGAIVIKDVKIEPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ RL A G+R + +VD+TNYV L+ G P H FD R+ S + VRRA +GEKI Sbjct: 239 PLWLQSRLMAAGIRPHNNVVDVTNYVLLEYGQPLHSFDYDRLGSKEVLVRRAVAGEKITT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L+ D + I + ++AG++GG + D+ TT++L+E A + I ++ + Sbjct: 299 LDDVERTLTTDYLAITNGSDPVALAGVMGGATSEVDNETTNILLEAAYFHGSTIRKASRE 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 LG+ +D+ RFE+GVD + ++I L GGT S + + KP + Sbjct: 359 LGLRSDASARFEKGVDPNRVREAGLRAAAMIAELAGGTVLSGVVEFDELDAKPNVVEISL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ L G ++ I+++L F E F ++ P+ RQD+ +AD++EE+ R+YG Sbjct: 419 EKINALLGTNIDANTVEGIMDKLQFPYEEENGVFTITAPTRRQDIVIEADVIEEVARLYG 478 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG-G 527 D I + LP T L+ Q + R V+R L + + E V++S + E+ F Sbjct: 479 YDNIPT-TLPNTAT-TPGGLTTIQVKKRKVRRFLENAGLHEAVSYSLTTAEKESFFTKES 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND------TP 581 + + P+S + S +RT+L+P LL A N +R++ + ++EV V++ D P Sbjct: 537 SNRVNVALPMSEERSALRTTLIPHLLDALSHNKNRSMQEVRLYEVGSVFQTDEETITKQP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ I LW + S + + VD F AK ++ L+ F Sbjct: 597 TETTFVSGAIMG----------LWHEHSWQGEKKPVDFFVAKGIVEGLLAQLNVLEKAEF 646 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +HPGR+ +K S V G G+ HP + + L E Y+ + ++ Sbjct: 647 VQTEVEGFHPGRTAKLKVSGTDV-GVIGQVHPTVAKEWSL------HETYVFELNFTKLV 699 Query: 701 RTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKS 757 +T+++ + + + RD+A +V + AG + +I L+ +V +FDV+QG+ Sbjct: 700 NIETEEIRYNAIPRFPAIDRDIALVVTESTQAGEVEKVIVEFGGPLLKNVALFDVYQGEH 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 L GKKS+A + Q + T D+++ + + +++ + +K A LRS Sbjct: 760 LDAGKKSLAFSLRYQDPEKTLTDEEVTKVHENVLKGLEEKLGATLRS 806 >gi|228935869|ref|ZP_04098679.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228987809|ref|ZP_04147918.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229158165|ref|ZP_04286233.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus ATCC 4342] gi|228625327|gb|EEK82086.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus ATCC 4342] gi|228771857|gb|EEM20314.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228823637|gb|EEM69459.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|324328452|gb|ADY23712.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis serovar finitimus YBT-020] Length = 806 Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQDHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVALALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|149021543|ref|ZP_01835598.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP23-BS72] gi|147930239|gb|EDK81224.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP23-BS72] Length = 801 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 246/825 (29%), Positives = 424/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVIIGTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P L + + L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDRL---PTSLPKYDGTAGELTATQKLRRQVRTIAEGVGLTEIITYTLTTPEKAVEFTAQ 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T ++ Sbjct: 533 PSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPREE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + VD F AK ++E + L+ A Sbjct: 592 LPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTYTAT 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 S HPGR+ I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 645 SEIASLHPGRTAAISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAA 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 698 LQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|293400833|ref|ZP_06644978.1| phenylalanyl-tRNA synthetase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305859|gb|EFE47103.1| phenylalanyl-tRNA synthetase, beta subunit [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 801 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 255/829 (30%), Positives = 428/829 (51%), Gaps = 53/829 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M + WL ++D +D+++E++ + +T GLEVE V + + S I KVLS E +PD D Sbjct: 1 MIISKKWLGQYMDLSDITIEEMAERITDAGLEVEGVAHMSSGSNLVIGKVLSCEAHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G E Q+VCGAPNV G + A G+ +P+ + IRG S GM+ Sbjct: 61 HLHVCQVDLGDTSE-QIVCGAPNVAAGQKVIVARVGAKLPDGE--IKAGMIRGQASNGMI 117 Query: 119 CSEKEL-----MLSDDSASIME-LPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCIGV 171 CS EL MLS++S + +E L DAPVG YL L D I+DV LTPNR+DC+ Sbjct: 118 CSLLELGVDAHMLSEESKNGIEVLDEDAPVGNEDPLGYLGLDDAILDVGLTPNRNDCMAA 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVA 230 +AL+ G KE+ + S +I K + ++ C F + V + Sbjct: 178 WSMALE---TGAILHKEVTLPYEEGSANIGTPTKLKVSSETEKCPLFLGKVINHVTIKPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVR--RACSGEKI 287 P WM++ L A G++SI+ +VDI+N V L+ G P H +D + I + +TV+ +AC+ Sbjct: 235 PKWMKELLMAAGMKSINNVVDISNIVMLETGQPLHFYDINAIPAQEITVKDHQACT---Y 291 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD +Y L+ D++VI ++G+ IAGI+GG + +D T+ +++E A++ + I + Sbjct: 292 TALDGVDYALTDDDIVITTEGKPIGIAGIMGGDDSKIEDTTSGIIIEAAIFHHVAIRNTA 351 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL--CGGTASDICIARNITYKPRKIV 405 + L + TD+ R+++G++ + V+L+ G + N Y P Sbjct: 352 RRLNLNTDASVRYQKGIEPMATFKAMDRAVALLREYADADGIEETVQYGDN-HYTPVAFD 410 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + +L G + +++LE L F+ + + V +PS+R D+ +AD+ EEI+R Sbjct: 411 VNLDSINKLLGTTFAEAEVMQVLEDLHFAPSKQGENIHVCIPSYRTDISMEADIAEEIIR 470 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVL 523 I G D++ S LP L +Q R V+ +L++ E V++S +SK+ + + Sbjct: 471 ILGYDRLPS-TLPYMPAT-LGALDKRQRMRRRVRDILSNLGYNEAVSYSLVSKKHIEDAI 528 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 Q +E+ +P+S D +R SLLP LL N R D A+FE+S+VY N E Sbjct: 529 LPCSQDIVEMASPMSEDRRYVRNSLLPSLLGCIAYNQARNQHDVALFEISNVYGNHHVEE 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 + +AA SG L ++ ++ VD + K A S++E S + +R + Sbjct: 589 RLAVAA-----------SGALQKNRWQKFSVDVDFYTLKGLAESMLEALGFSNNRIRVQE 637 Query: 643 GA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +HP RS + E+ LG FGE HP + + + + + G E+ L+ + ++ Sbjct: 638 NKLDTKHFHPYRSAELYLGKEL-LGIFGEIHPAMAKEYAIDD-VYGMELNLEVLLNNKAS 695 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-----IDDVTVFDVFQG 755 + K + +S V RDLA +V + + ++N I+ +L I +V VFDV+ G Sbjct: 696 KV---KFIEVSKYPSVSRDLALVVKEDVKVADILNSIRKNGKLGKENIIQNVEVFDVYTG 752 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + EG KS+A+ + Q + T +D +I + D+I+E + +A LR+ Sbjct: 753 EHVEEGHKSIALSINFQSNERTLKDKEINEIFDKILETLKHDVDAQLRA 801 >gi|307151961|ref|YP_003887345.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7822] gi|306982189|gb|ADN14070.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7822] Length = 809 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 250/831 (30%), Positives = 424/831 (51%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ +++WL++ +D ++ E++ +TLT G+EVE++ D R+ I K+L E +P+ D Sbjct: 1 MRISINWLRELVDITLTPEELAETLTIAGIEVEEIEDRRQQADGVVIGKILKREPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +VCGAPN R + A PG+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCEVDIGGESTSTIVCGAPNARADIFVAVATPGTYLPAVDLKIKPAKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ +S I + +G + L L D I+D+S T NR+D + + G+A + Sbjct: 121 CSLAELGLTKESEGIHIFSQKNLELGSDVRPLLGLDDVILDISPTANRADALSMVGVARE 180 Query: 178 LVA---AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A A L + ++S P S+ LE+ DD C + ++GV+ +P W+ Sbjct: 181 VAALTGAALNLPQPPDLSIPSKKGSLSLEV----DDGVACPAYMGTVIEGVKIAPSPQWL 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 ++RL+A G+R I+ +VD+TNYV L+ G P H FD R+ V + VR A E+I Sbjct: 237 QKRLEAAGVRPINNVVDVTNYVLLEWGQPLHAFDRERLKTVGKGKSLSIGVRFAREKEEI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD Q L P N++I S+ +IAG++GG+ + T ++++E AL+DPI I RS Sbjct: 297 KTLDGQTRSLVPQNLLITSNDVPVAIAGVMGGEETEVYEGTENLVLEAALFDPITIRRSS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--------RNITY 399 K+ G+ ++S R+ERGV+ + +SLI + GG A IA R+I Sbjct: 357 KSQGLRSESSARYERGVNQIELDLACARAISLITEIAGGKAVHQVIADARPDQQTRSIEL 416 Query: 400 KPRKIVFMNSEVKRLSGID-VPIEDSLRILERLGFSVIG-EYDKFEVSVPSWR-QDVEEK 456 + ++ + VK GI V D RIL LG + + D + V+VPS+R +D+E + Sbjct: 417 RLERLQQILGNVKTSDGIGVVEAADVERILTDLGCQLTPIKTDVWTVTVPSYRYRDLERE 476 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EE+ R+YG D + LP + + LS ++ R V+ + + EVV +S + Sbjct: 477 IDLIEEVARLYGYDHF-CDTLP--RKTEPGALSFEEQLQRKVRALFRGVGLTEVVQYSLV 533 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 E+ E+ + NP+ A+ S +RT+LL GL+ A N + F FE+ + Sbjct: 534 KPEKD--------EVVLANPLLAEYSALRTNLLNGLIDAFEYNQSQGNGAFNAFEIGRIF 585 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 Y+++ ++ AGI G + GR W+ + + + ++AK SV E + Sbjct: 586 YKSNEGIQEQDSLAGILGGE--VTPLGR-WTRGG--KSQPMSWYEAKGILESVFEALEIV 640 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-I 694 + + HPGR+ + + LG FG+ HP + GL + + FE+ D + Sbjct: 641 VEYQPDQNDER-LHPGRTASLWLEGK-QLGIFGQLHPQLRQKRGLIDEVYAFELSFDRLL 698 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 K T + S V RDLAF + L ++K L+ V +FD + Sbjct: 699 EALNKDELVTPRFQAYSPFPAVARDLAFFAPIDLSVFQLEKVMKKAGGSLLAGVELFDEY 758 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G+++ EG++S+A + + T D ++ + ++I E +V++ LRS Sbjct: 759 KGQNVPEGQRSLAFSLAYRVGDRTLTDTEVDPVHNQIREALVEEFKVTLRS 809 >gi|332978197|gb|EGK14929.1| phenylalanyl-tRNA synthetase beta subunit [Desmospora sp. 8437] Length = 808 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 251/831 (30%), Positives = 418/831 (50%), Gaps = 50/831 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M+ + WL ++++ + VS E++ + LT G+EV+ V+ R+ ++ + V SVE +PD Sbjct: 1 MRVSYQWLNEYVNLEGVSPEELAEQLTRGGIEVDLVELRDRGVNKVVVGHVKSVEPHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + + +VCGAPNV G A PG+ +P + + K+RG+ S GM Sbjct: 61 DRLRVCTVDAGQGELLNIVCGAPNVAAGQKVPVALPGARLP-GGIKIKRSKLRGVPSEGM 119 Query: 118 MCSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL L + I+ L VG L L D ++++ LTPNRSDC+ + Sbjct: 120 ICSAQELGLPEKLLPKEQQDGILVLSQGTEVGEDAKKLLGLDDVVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVR 226 GIA ++ G L + + P +E LE + LD C +A V G+R Sbjct: 180 WGIAYEV-----GALLDREVRLPQPAER-RLEGKGKSVTIVLDAEEDCPLYAAQVVDGIR 233 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM+ RL A G+R I+ +VDITNYV L+ G P H FD ++ + + VRRA +GE Sbjct: 234 LGPSPQWMQNRLLAAGVRPINNVVDITNYVMLEYGQPLHAFDYHQVENGEIVVRRATAGE 293 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD + ++I + IAG++GG+++ + TT +L+E A + P ++ R Sbjct: 294 TVTTLDGVTRACDHETLLITDGTKPIGIAGVMGGENSEVTEETTTLLIESAYFAPESVRR 353 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + LG+ +++ RFE+GVD + ++P L+ V L+ L G + + V Sbjct: 354 TTRRLGLRSEASARFEKGVDPERILPALQRAVELMEELASGKVASAVTGEQMGEIDDVTV 413 Query: 406 -FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +S + + G+ V + I RL F + + V VPS R D+ + DL+EE+ Sbjct: 414 DLRHSRLIGVLGVQVDEQAVTDIFRRLRFPTEVKEGIYRVQVPSRRPDISIEVDLIEEVA 473 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ---- 520 R+YG D+I + LP Q + +L+ +Q R ++ L EVVN+S S + Sbjct: 474 RLYGYDRIPTT-LPWGQ-QSPGSLTPEQRLRRTIRHTLRDVGFHEVVNYSLTSPDALRSL 531 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND- 579 + R + I P+S + +RTSL+P LL+ N+ R ++FE+ VY + Sbjct: 532 EQVIHPKARPVRISMPMSDERKLLRTSLVPQLLETAEYNIHRREEGVSLFEMGRVYLTEE 591 Query: 580 -----TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 PE +++M AG+ G+ + + W K+ D F K + L ++ + Sbjct: 592 KKLTQQPE-ERWMLAGLTTGAL----TSKHWQGKTA----VPDFFSLKGE-LELLFQRLG 641 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 L +R+E+ P YHPGR+ +K + V+G G+ HP + L + + FE LD + Sbjct: 642 LTGIRYEAVQPEGYHPGRTARMKLE-DRVIGLIGQIHPQTAEAHDLED-VFVFE--LDLL 697 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 P+ + + + L RDLA +VD +PA L ++I + VT+FDVF Sbjct: 698 PVMEAVLGEMLQYRPLPKYPATTRDLALVVDADVPADRLQDLIHATGGEWLRSVTLFDVF 757 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G +G GKKSVA + Q T D+++ + ++ + K+ A LR Sbjct: 758 TGGRIGNGKKSVAYSLSYQAEDRTLTDEEVNEVHQAVISTLEKELGATLRQ 808 >gi|148988945|ref|ZP_01820345.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae SP6-BS73] gi|147925442|gb|EDK76519.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae SP6-BS73] Length = 801 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 245/827 (29%), Positives = 426/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQATEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVIQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQLSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFARLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 AALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|145224116|ref|YP_001134794.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium gilvum PYR-GCK] gi|145216602|gb|ABP46006.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium gilvum PYR-GCK] Length = 832 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 249/826 (30%), Positives = 410/826 (49%), Gaps = 86/826 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL+D + DVS E++ IG EVE++ ++ P T+ +V+ +E Sbjct: 1 MRIPYSWLRDTVQAGAPGWDVSPEELEQAFIRIGHEVEEIIPAGPVTGPLTVGRVVEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQ----EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + I +++D G +VCGA N VG L V A PG+ +P + + RK Sbjct: 61 LTEFKKPIRAVKVDVGSENVAGAPRDIVCGATNFAVGDLVVVALPGAVLP-GDFAIATRK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R Sbjct: 120 TYGRTSDGMICSVSELNLGSDHSGILVLPPGTAEPGTPAAGVLGLDDVVFHLAITPDRGY 179 Query: 168 CIGVRGIALDLVAA-GLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 C+ VRG+A ++ A L +++ P E++P+ I D + + F + V G+ Sbjct: 180 CLSVRGLAREVANAFDLDYTDPADVAPLPAEGEALPVTI----DPGTGVQRFGLRPVTGI 235 Query: 226 -RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+P W+++RL G+R+IS VD+TNYV L+ G+P H D S I+ VR A Sbjct: 236 DPKAVSPWWLQRRLLLSGIRAISPAVDVTNYVMLELGHPMHAHDRSLITGGFRVRFAEPA 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E ++ LD+ E L +V+I D +I G++G D+TTDVL+E A+WDP ++ Sbjct: 296 ETVVTLDDVERTLDTVDVLIVDDAATAAIGGVMGAGTTEVRDSTTDVLLEAAVWDPAAVS 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITY 399 R+ + L + +++ R+ER VD + L +L+ + GGT + Sbjct: 356 RTQRRLRLHSEAGRRYERTVDPAISVAALDRCATLLADIAGGTVQPTLTDWRGDPPRDDW 415 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 P + R +G++ P + + L ++G V+ E + + PSWR D+ + ADL Sbjct: 416 SPAPVSMPVDLPDRTAGVEYPQGAAQKRLTQIGADVVVEGELLTATPPSWRPDIRQPADL 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK- 518 VEE++R+ G+D I S L R L+ Q R R + + LA +E++ F+ Sbjct: 476 VEEVMRLEGLDVIPSV---LPTAPAGRGLTATQKRRRAIGKSLALSGFVEILPTPFLPAG 532 Query: 519 --EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +Q L +R +LNP+ AD ++ T+LLPGLL+A RNV R D A+F + Sbjct: 533 IFDQWGLDADDRRRDTTTVLNPLEADRPSLATTLLPGLLEALARNVSRGAVDVALFAIQQ 592 Query: 575 VYE------------NDT--------------PEGQKYMAA---GIRKGSSGIEGSGRLW 605 V E ND P +++AA G+R+ +G G+GR Sbjct: 593 VVEPTSETRAVERIPNDRRPTDDEIAVLDASLPHQPQHVAAVLTGLRE-PAGPWGAGR-- 649 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVL 664 R D F +A+ VI V +D +LR + P +HPGR + ++V+ Sbjct: 650 ------RVEAADAF----EAVRVIGRAVGVDFTLRADQTLP--WHPGRCAAVLIG-DVVV 696 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ G+ HP +++ GL C E+ LD++P+ T+T +S V +D+A IV Sbjct: 697 GHAGQLHPAVVERSGLPKGTCAVEIDLDAVPL-----TETLPAPRVSPFPAVFQDVALIV 751 Query: 725 DQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 + A ++V+ ++ L++DV +FDV+ G +G+G++S+A+ + Sbjct: 752 GDDVSAQSVVDAVRAGAGELLEDVRIFDVYTGPQIGDGRRSLALAL 797 >gi|302871915|ref|YP_003840551.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor obsidiansis OB47] gi|302574774|gb|ADL42565.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor obsidiansis OB47] Length = 791 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 247/823 (30%), Positives = 421/823 (51%), Gaps = 53/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK +D + S+E++ D LT G +VE + R E + + KVL + +P + Sbjct: 1 MKVSLEWLKSFVDIECSVEELVDKLTMSGTKVEGYEKRLENIKNVVVGKVLEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + +DT K + + ++ A NV+VG A PG+ + N ++V + +GI S GM+ Sbjct: 61 NLFVCNVDT-KDKILTIITAAKNVKVGSYVPVAKPGAVLA-NGKTIDVLEFKGIVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFSYADENGIFILEGMNDSLIGIDIKTALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 V GIA ++ A LK +++ + E + + ++ D +C+ + +K V+ Sbjct: 179 VLGIAREIAAILNKPLKFPSMNFKETDEPVKNYLDSIEIKDKKICRRYMGRVIKNVKIEE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD +I + VR A GEKI+ Sbjct: 239 SPLWLRRRLVACGVRPINNIVDVTNYVMLEMGQPLHAFDLDKICGRNVFVRLASDGEKIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D+NTT VL+E A ++P I R+ + Sbjct: 299 TLDGVERVLRSSDIVIADEKRAIAVAGVMGGLDTEVDENTTLVLLESATFNPAMIRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAEVAIQRACALIEQIGAGEVVKGTVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S +++L G+ + ++ + IL RL E + F +P +R D+E+ AD+ EE++RIY Sbjct: 419 FSYIQKLLGLRIEKDEVVNILNRLEIKYDEEKEVF--IIPPFRTDIEDMADISEEVIRIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D++ S + L+ +Q +K LA+ E+ ++SF S + + G Sbjct: 477 GYDKLPSRVFMGNAISS--GLTQKQRMVNNIKNFLANSGYYEIYSYSFESPKVYEVLKGY 534 Query: 528 QRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + ++ILNP+ D S MR LL +LK N+ R I D +FE+S V+ + PE Sbjct: 535 NLDDAVKILNPLGEDFSVMRMQLLSSILKTVYLNISRNIKDVKVFELSTVFKKSDEKLPE 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + +A G SS D + +LFD + + +RF S Sbjct: 595 EKLVLAIG----SSA--------QDFYSVKGVLENLFD-----------MLRIKEVRFSS 631 Query: 643 GAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP RS I T +++LGY GE HP+IL+ F + + EVY+D + ++KK Sbjct: 632 EHQNLNLHPTRSAKIYTDDQLLLGYIGEVHPDILERFDIPARVVYAEVYIDELLEAEKKE 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 K+ L V+RD AF+V + + + I K ++++ +FDV++G+ + Sbjct: 692 ---KRYTQLPKYPAVERDYAFVVPDDVESRVIEEIFKKYSSDILEEFHLFDVYKGQQIKP 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS A + + + T D DI + ++I++ +K N LR Sbjct: 749 GFKSYAYKAIFRSKSKTLSDSDINQVQEKILDE-LKNYNISLR 790 >gi|298372285|ref|ZP_06982275.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroidetes oral taxon 274 str. F0058] gi|298275189|gb|EFI16740.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroidetes oral taxon 274 str. F0058] Length = 823 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 252/839 (30%), Positives = 418/839 (49%), Gaps = 52/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M +LSWL+D+++TD++ ++I LTSIGLEV + E+ L + +V + ++ Sbjct: 1 MNISLSWLRDYIETDLTADEIAKILTSIGLEVGHISEFESIKGGLEGLVVGEVKTCVKHE 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D G + +Q+VCGA N+ G V A G+ + + + + KIRG+E Sbjct: 61 NSDHLHVTTVDVGAGEPLQIVCGAANIAQGQKVVVATVGTKLYGGDESFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP + VG DY + +D +I+V +TPNRSD I Sbjct: 121 SFGMICAEDEIGVGKSHDGIIVLPSETAVGTLAKDYYRVETDTVIEVDITPNRSDAISHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + P ESI + I+ +D+S C +A + GV Sbjct: 181 GVARDLYAYCFAHGIAAELRRPQLDESIAPKGNDNPKIEVRVDNSDACPRYAGISLIGVG 240 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 + +P W++ RL A+GL I+ +VDITNY+ G P H FDA RI+ + VR A GE Sbjct: 241 VDQSPQWLQNRLLAIGLSPINNVVDITNYMLHSFGQPLHAFDADRIAGHKIIVRNAVEGE 300 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + +AGI GG H+G +T V +E A +DP+ + Sbjct: 301 KFVTLDGVERTLTKADLMICDAEKPMCLAGIFGGLHSGVSQDTKSVFIESAYFDPVGTRK 360 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 S + G+ TDS +RFERGV+ I VL S+I + G T ASDI T ++ Sbjct: 361 SARYHGLNTDSSFRFERGVNPHDTIYVLGIAASMIARITGATIASDIVDIYPKTIDDFEV 420 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 ++++ L G D+ + I E L +++ + + + VP++R DV D+ Sbjct: 421 CVSLAKIRSLVGKDIDTQTIETIFEGLEIAIVSKDTASDDTVYRLRVPAYRTDVRRDVDV 480 Query: 460 VEEILRIYGVDQI---KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 +E+I+RIYG + I +S +P++ LQ + L + E++N SF Sbjct: 481 IEDIMRIYGYNNIEFSQSAKIPVSYRTKPDRHYLQN----IISEQLTANGFYEIMNNSF- 535 Query: 517 SKEQS----VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 SK Q + G + ++N +S+D++ MR +LL G L++ N++R AD +E Sbjct: 536 SKSQYYDCLTTYPSGN-SVSVMNALSSDLNVMRQTLLFGGLESLAYNINRQNADLKFYEF 594 Query: 573 SHVYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI- 629 + Y + P+ +AA + G+ +GR + ++D KA +++ Sbjct: 595 GNCYRYVAEAPKDSDPLAAYSQSEHLGLWITGRRLPQSWLRKDEATSVYDLKAYVQNILI 654 Query: 630 -EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 L F+S S ++ + TS+ L G IL F + + + Sbjct: 655 RLGIGKLAVREFDSDIYS-----QALELATSSGKPLAVLGVVSKGILKTFDIKEDVFFAD 709 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHP---VKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 ++ D + T VHL+ + V RDLA ++D++I + NI NV+R L+ Sbjct: 710 IFWDEALAESVRHT-----VHLTEIPKFPEVSRDLALLLDKNITFSQVENIAYNVERKLL 764 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VT+FDV++GK+L EGKKS A+ ++Q T D I +M ++ + + A +R Sbjct: 765 RRVTLFDVYEGKNLEEGKKSYAVNFILQDSDKTLTDSQIETIMSKLQKAFSTELGARIR 823 >gi|228993284|ref|ZP_04153200.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus pseudomycoides DSM 12442] gi|228766352|gb|EEM14995.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus pseudomycoides DSM 12442] Length = 806 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 243/829 (29%), Positives = 416/829 (50%), Gaps = 50/829 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGAPN+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAPNIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL +++ D A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVAKDYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K E I ++ + + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAADLQEVEEKTSDYISVSVEATEQNPLYIAKMVKNVKVGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILIEYGQPLHAFDYDKLGSKEIIVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + D++T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGAESEVDNDTVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEVDNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + I L F F V+VP R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTIFTNLKFPFTEVEGTFHVNVPVRRPDITIAEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L T + L++ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPTGTMTRGKLTVAQAKRRKVRRYLEGAGLYEAITYSLTSVDKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A N R A++EV ++ E + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNNARKNDSVALYEVGSIFLPTAEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSL 635 + ++++ AG+ G + W + + VD F AK D L V L Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVAKGVLEGLFDVLGVSNNITYL 647 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + R HPGR+ I E V+G+ G+ HP + + FE+ L + Sbjct: 648 PTKR------EGMHPGRTADILLDEE-VIGFIGQLHPEAQKQLDVKDTFV-FELSLVKVF 699 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ 754 + + T + S+ RD+A +V+ + AG + +I L+ +VT+FD+++ Sbjct: 700 AADTEETYYSAIPRFPSM---TRDMAVVVNTEVKAGEMKQVIAEAGGELLKEVTLFDLYE 756 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + EGKKS+A + + T D+++ R++ V +K A LR Sbjct: 757 GEKMEEGKKSLAFSMNYFDPERTLTDEEVTEAHSRVLAVVEEKFGAELR 805 >gi|218234911|ref|YP_002369358.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus B4264] gi|229152757|ref|ZP_04280940.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus m1550] gi|218162868|gb|ACK62860.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus B4264] gi|228630577|gb|EEK87223.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus m1550] Length = 806 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|229072061|ref|ZP_04205270.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus F65185] gi|229081812|ref|ZP_04214304.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock4-2] gi|228701400|gb|EEL53894.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock4-2] gi|228710995|gb|EEL62961.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus F65185] Length = 806 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I EI+ G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGEII-GFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|149010799|ref|ZP_01832170.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP19-BS75] gi|147765280|gb|EDK72209.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP19-BS75] Length = 800 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 246/824 (29%), Positives = 427/824 (51%), Gaps = 45/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGE-EERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 119 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 178 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 179 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 235 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 355 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 415 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 474 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 475 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 529 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 530 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 589 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLEVTYTATA 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 645 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEGAL 697 Query: 704 TKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 698 QPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 756 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K N +R Sbjct: 757 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNGEVR 800 >gi|257875812|ref|ZP_05655465.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC20] gi|257809978|gb|EEV38798.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus casseliflavus EC20] Length = 806 Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 230/820 (28%), Positives = 427/820 (52%), Gaps = 31/820 (3%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++LD ++++ +++ D ++ G+EVE +D E L + +V +PD Sbjct: 1 MLVSYKWLNEYLDLSEITPKELADKMSVTGIEVEGIDVPEEGLKKIVVGEVTDCRPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I +++ G+ ++ Q+VCGAPNV+ G+ + A PGS I N+ + K+RG S GM Sbjct: 61 DHLSICQVNIGEEEDTQIVCGAPNVKSGIKVIVALPGSRIV-GNVKIKKSKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL +D + I LP +A VG + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQELGYADSVIPKEYAEGICYLPAEAEVGTPVFPYLDMDDHIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A K I+ S + +I+ + +++ + + + GV +P Sbjct: 180 RGVAYEVGAIYRQTPKFPEIALNESEVAAADKIQVKVTEATDAPAYQIRIIDGVTIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRR E ++ L Sbjct: 240 QWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRGKENESLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + LS +++VI + ++AG++GG + + TT V +E AL+DP+ I + K Sbjct: 300 DEETRQLSSEDIVITNGTTPVALAGVMGGLDSEITETTTTVALEAALFDPLAIRLTSKKF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G++ + +LI L GGT I + +P ++ + Sbjct: 360 NLRSESSARFEKGINQATVAKACDAAAALIAELAGGTVLKGAVIGSQVAVEPVEVTITLA 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G ++ E+ I + LGF E D + VSVP R D+ +AD++EE+ RIYG Sbjct: 420 RINSYLGTEITDEEVQEIFDALGFGHRQEADSYIVSVPPRRWDITIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ P L Q E +L+ Q TR V+ +L + E ++++ ++E++ F Sbjct: 480 DRL---PSTLPQGETVAGHLTKAQRLTREVRTLLEGNGVSEAISYALTTEEKAQQFTDKS 536 Query: 529 RELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ L+ P++ + + +R +L+ GLL N+ R A++E+ V+ G Sbjct: 537 SQVTRLDWPMTEERAVLRLNLISGLLDDVAYNLARKNNRVALYEIGRVFYQT---GDSKH 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPS 646 G+ +G + + + + VD F K ++ + D +R++ + A Sbjct: 594 ELPTEVNHLGLALTGNIHEKDWQTQAQKVDFFHLKGILENLFDSLALTDRIRYQKTAAIK 653 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ +I + + G+ G+ HP+I + +S E Y+ + + Q KT++ Sbjct: 654 EMHPGRTAMILLDDQEI-GFLGQVHPSIAKDYEVS------ETYVAELNLDQLLAAKTEQ 706 Query: 707 VVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 +++ +S V RD+A ++D+ I +++ II+ + R + + +FDV+QGK++ GKK Sbjct: 707 LIYQPVSKFPSVTRDMALLLDETIDNQSVMEIIRESAGRFLSAIRLFDVYQGKNIEAGKK 766 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+ + + T D++I + +I N+ +K A +R Sbjct: 767 SLGYSLTFSNPEATLTDEEINQAIAKITRNLEEKVQAEIR 806 >gi|315503268|ref|YP_004082155.1| phenylalanyl-tRNA synthetase, beta subunit [Micromonospora sp. L5] gi|315409887|gb|ADU08004.1| phenylalanyl-tRNA synthetase, beta subunit [Micromonospora sp. L5] Length = 848 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 273/855 (31%), Positives = 416/855 (48%), Gaps = 110/855 (12%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKV-DNREALS-PFTIVKVLSVE--- 53 M+ ++SWL++++D D+ + L +G+EVE V D RE+++ P + +VL +E Sbjct: 1 MRVSVSWLREYVDLPADLPTGDLEQALVDLGIEVESVVDLRESVTGPLVVGEVLEIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N VG V PG +P + Sbjct: 61 GFKKPIRFC---RVDVGAANGTGEPQEI--VCGARNFAVGDKVVVILPGGVLP-GGFAIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPID--APVGGRLSDYLELSDPIIDVSLTP 163 RK G S GM+CS +EL L DD + I+ LP D A G + L D ++++ +TP Sbjct: 115 ARKTYGRNSHGMICSAQELGLGDDHSGIVVLPEDVKAQPGDDARPVVGLDDVVVEMEITP 174 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 +R + VRGIA +L A LG P + ++ D C FA V+ Sbjct: 175 DRGYALSVRGIARELSHA-LGVPFRDPADAPAPGATAEPAYPVEVRDPVGCDRFAARMVR 233 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 GV V P WMRQRL G+RSIS VDITNY+ L+ G P H FDA RI+ L VRRA Sbjct: 234 GVDPTVETPGWMRQRLTVAGVRSISLAVDITNYLMLELGQPMHAFDADRIAGTLVVRRAE 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GEK+ LD LS +++VI + S+A ++GG+ + +TT+VL E A WDP Sbjct: 294 VGEKLTTLDGVNRTLSAEDLVICDETGPISLAAVMGGETSEVLASTTNVLFEAAHWDPAT 353 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-KP 401 + R+ + + +++ R+ERGVD + L V L+ L GGTA D + +I + P Sbjct: 354 VGRTARRHKLFSEAAKRWERGVDPALPLVALDKAVRLLTDLAGGTAGDEVL--DIDHVAP 411 Query: 402 RKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVI-----------------GEYDKFE 443 R V + ++ R G+ + + +LE++G +V GE + Sbjct: 412 RTPVTLPVDLPSRRVGVSYSPDRVVELLEQVGCTVTRGADRLAEDPGTAGVGSGEGEVLT 471 Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 V+ PSWR D+ + ADLVEE++R+ G D++ S L R L+ QQ R R V R LA Sbjct: 472 VTPPSWRPDLTDPADLVEEVVRLDGYDRVPSV---LPTAPPGRGLTWQQQRRRAVARSLA 528 Query: 504 SRAMMEVVNWSFISKE---QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGR 558 R +EV+ F++ E Q L R + + NP+S + +RT+LL LL R Sbjct: 529 ERGYVEVLAQPFVAPELVDQLGLPADDPRRPAVRLANPLSEEEPLLRTTLLGPLLGIVKR 588 Query: 559 NVDRAIADFAIFEVSHVYE-------------NDTPEGQKYMAAGIRKGS---------- 595 NV R D AI+E+ V+ + P +++ AA + Sbjct: 589 NVGRGQRDVAIYEIGTVFHPRPGAGTPPAMGVDRRPTDEEFAAADAVVPAQPRHVAVALT 648 Query: 596 -----SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 +G G+GR W+D E +D AD ++V +G + + Sbjct: 649 GEIEPAGWWGAGRTAGWADAVEAGRAVLDAAGIPADRVTV------------RAGERAPW 696 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR + ++V+G+ GE HP +L L E+ LD++P + T Sbjct: 697 HPGRCAELVVD-DVVVGHAGELHPAVLAALELPRRTSAMELDLDALPAAPLAAGPT---- 751 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S+ P D+A +VD +PA + +++ L++DV +FDV+ + LGEG+KS+A Sbjct: 752 -ISTFPPALIDVALVVDDAVPAAEVRAALVEGAGALLEDVRLFDVYTSEQLGEGRKSLAY 810 Query: 768 QVLIQPLKDTFRDDD 782 ++ TFR D Sbjct: 811 KL-------TFRAPD 818 >gi|288905006|ref|YP_003430228.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus gallolyticus UCN34] gi|288731732|emb|CBI13293.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus gallolyticus UCN34] Length = 801 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 253/839 (30%), Positives = 419/839 (49%), Gaps = 74/839 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E L+ + V+S E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSTPSEGLTKLVVGHVVSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEELRQIVCGAPNVTAGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKELKEVSKAAKDVINVAI-----ESDKVLTYKARVVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ D + R A +GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNARAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI + ++AG++GG+ DDN+ +V++E A++D +I ++ Sbjct: 294 VTLDGEERELIAEDLVITVADKPVALAGVMGGQATEIDDNSKNVVLEAAVFDGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 L + ++S RFE+G++ + L +++ L G D+ R P + V Sbjct: 354 GRLNLRSESSSRFEKGINYATVAEALDFAAAMLTELADG---DVLAGRVEAGSVPTEDVE 410 Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +++ + ++ G ++ D + +LGF + G DKF VSVP R D+ +ADLVEEI Sbjct: 411 VSTTLDYVNVRLGTELTYADIEDVFAKLGFGLSGNADKFTVSVPRRRWDITIQADLVEEI 470 Query: 464 LRIYGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 RIYG D LP T E L+ Q R ++ + + E+V+++ + E+ Sbjct: 471 ARIYGYDN-----LPTTLPEAAGTAGELTATQKLRRKMRSIAEGAGLTEIVSYALTTPEK 525 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN- 578 + F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ V+E Sbjct: 526 ATEFTLQPSNLTELMWPMSVERSVLRQNVVSGMLDTVAYNVARKNSNLAIYEIGKVFEQK 585 Query: 579 -----DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-F 632 + P A I SG + + + VD F AK ++E F Sbjct: 586 GNPKEELPNEVSTFAFAI---------SGLVAEKDFQTKATPVDFFYAKG----IVEAIF 632 Query: 633 VSLD---SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 LD E G S HPGR+ I ++V G+ G+ HP + + E+ Sbjct: 633 AKLDLTVDYVAEKGLASM-HPGRTASIYLDGQLV-GFVGQVHPQTAKNYNVPETYVA-EL 689 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT-----LVNIIKNVDRLI 744 LD I + K V ++ V RD+A + +PA T L I + + Sbjct: 690 NLD---IIEAALHADKAFVEITKFPAVSRDIALL----LPAATTHKEILAAIESAKVKRL 742 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+ +FDV+ G ++ EG KS+A + Q D D+++ MD+I + +V + A +R Sbjct: 743 TDIKLFDVYAGANIAEGMKSMAYSLTFQNPNDNLTDEEVAKYMDKITKVLVNQLGAEVR 801 >gi|317478852|ref|ZP_07938003.1| phenylalanyl-tRNA synthetase [Bacteroides sp. 4_1_36] gi|316905028|gb|EFV26831.1| phenylalanyl-tRNA synthetase [Bacteroides sp. 4_1_36] Length = 820 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 250/835 (29%), Positives = 415/835 (49%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SVGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQAALKKPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A K + Sbjct: 361 RRHGLNTDASFRFERGIDPNATIYCLKQAALMVKELAGGTISSEIKDVCAA---PAKDFR 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 + +V L G +P++ I+ L ++ E + + VP +R DV+ D++E+ Sbjct: 418 VELAYEKVNSLIGKVIPVDTIKSIVTSLEMKIVDETAEGLTLDVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQ 520 ILRIYG + ++ + + K V L E++N S + Sbjct: 478 ILRIYGYNNVEIPTTLKSCLTTKGEYDKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYYD 537 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 ++ + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 538 NLESYPSKNLVMLLNPLSADLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCYHFNE 597 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIEPF 632 E PE K +AA G+ +G+ W+ E +++ KA +V Sbjct: 598 EKKNPE--KVLAAYSEDYHLGLWVTGKRVVNSWAHPDENS----SVYELKAYVENVFARL 651 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + L + Y G S ++T L FG +L F + N + Y Sbjct: 652 GLHMHDLVVGNLTDDIYAAGLS--VQTRGGKRLATFGIVTKKLLKAFDIDNEV----YYA 705 Query: 692 DSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 D K + KV + +S VKRDLA ++D+ + + I + +L+ +V+ Sbjct: 706 DFNWKELLKAIRNVKVSYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVS 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 766 LFDVYEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKIMSKLVKNLEDKLNAKLR 820 >gi|228960828|ref|ZP_04122463.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798850|gb|EEM45829.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pakistani str. T13001] Length = 806 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADAIEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTVE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAEHTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|301056068|ref|YP_003794279.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis CI] gi|300378237|gb|ADK07141.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus cereus biovar anthracis str. CI] Length = 806 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|294340015|emb|CAZ88379.1| phenylalanine tRNA synthetase, beta-subunit PheT [Thiomonas sp. 3As] Length = 813 Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 270/845 (31%), Positives = 413/845 (48%), Gaps = 75/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F SWL+ + D+S E + DTLT GLEVE+V A S + V V+ +P+ D Sbjct: 1 MQFPESWLRQFCNPDLSTEALADTLTMAGLEVEEVQAAALAFSGVVVGLVRDVQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP-----ENNMIVNVRKIRGIE 113 + ++D G Q +Q+VCGAPNV VG+ A G+ +P + + K+RG+E Sbjct: 61 KLRVCQVDVGAAQWLQIVCGAPNVAVGMAAPCALVGAELPPQQEGQGAFRIGPAKMRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL LS D A ++ L G L ++L L + + + LTPN C+ + G Sbjct: 121 SQGMLCSARELGLSADHAGLLALQGAPQAGADLREWLSLDEAVFTIKLTPNLGHCLSIIG 180 Query: 174 IALDL--VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 +A ++ V + P ++ +P+ I + LC F+ ++GV Sbjct: 181 VAREVSAVTGAVFHRPTFRTVAPTLADRLPVSI----EAPDLCGRFSGRIIRGVNARAET 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+ RL+ G RSISALVDI+NYV L+ G PSHVFD ++I LTVR A GE++ L Sbjct: 237 PQWMKTRLERSGQRSISALVDISNYVMLELGRPSHVFDLAKIRGGLTVRWAREGEQLELL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + Q LS D VIA++ ++S+AGI+GG+ +TTD+ +E A W P I + L Sbjct: 297 NGQTISLSADMGVIAAENGVESLAGIMGGESTAVTLDTTDIYLEAAFWWPDAIRGRARRL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMN- 408 TD+ RFERGVD + L I +LIL +CGG A IT P RK V M Sbjct: 357 NFSTDAAARFERGVDYATTVEHLDAITALILDICGGQAGP--ADDQITQLPQRKPVRMRV 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW-------RQDVEEKADLVE 461 + +++ GI + + I RLG E D+ + P+W R D+E + DL+E Sbjct: 415 ARCEKVIGIPIGSDRMGEIFSRLGLQA--ELDR-NSTEPAWIVTPGAERFDLEIEEDLIE 471 Query: 462 EILRIYGVDQIKSE-------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 E+ RI+G I ++ PLP+ E +R L ++ A+ E +N+S Sbjct: 472 EVARIHGYQHIPTQAPVARLHPLPVP--EGQRTL-------HSLRLKAAALGYQETLNFS 522 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 F+ + F G + +LNPI++ MS MR++L+ L+K N++ +FE+ Sbjct: 523 FVDAQAEQDFAGQADPIRLLNPIASQMSVMRSTLIGSLVKVLADNLNHRAKRVRLFELGR 582 Query: 575 VYENDT-PEGQKYMAAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 V+ D E AGIR+ +G+ G + + E R VD +D KAD ++ E Sbjct: 583 VFARDAQAENGPMQVAGIRQPMRLAGL-AYGSVVPVQWAEPERRVDFYDVKADVEALCE- 640 Query: 632 FVSLDSLRFESGAPSW-------YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 L SG W HPGRS ++ E LG GE HP + + L Sbjct: 641 -----GLGNRSGELQWTPVQHPALHPGRSAEVRLGGE-RLGVVGELHPQWVQRYHLQFAP 694 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN----- 739 FE LD+ + +K + + + V+RDLAF V + + ++ Sbjct: 695 VIFE--LDAGLLQAQKLPVFAPINRVPA---VQRDLAFQVPSGVSYAKMQQAVQTAIQNI 749 Query: 740 -VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 V +I +V +FD+F KS+A ++ +Q + T D+ + +V + T Sbjct: 750 PVCGIIREVRLFDLFTPPG-DTTSKSMAFRLQLQD-QQTLTDERVDAACQALVAELATAT 807 Query: 799 NAVLR 803 A LR Sbjct: 808 GAQLR 812 >gi|228999338|ref|ZP_04158917.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus mycoides Rock3-17] gi|228760283|gb|EEM09250.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus mycoides Rock3-17] Length = 806 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 243/829 (29%), Positives = 415/829 (50%), Gaps = 50/829 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGAPN+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAPNIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL +++ D A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVAKDYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K E I ++ + + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAADLQEVEEKTSDYISVSVEATEQNPLYIAKMVKNVKVGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILIEYGQPLHAFDYDKLDSKEIIVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + D++T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGAESEVDNDTVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEVDNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + I L F F V+VP R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTIFTNLKFPFTEVEGTFHVNVPVRRPDITIAEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L T + L++ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPTGTMTRGKLTVAQAKRRKVRRYLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A N R A++EV ++ E + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNNARKNDSVALYEVGSIFLPTAEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSL 635 + ++++ AG+ G + W + + VD F AK D L V L Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVAKGVLEGLFDVLGVSNNITYL 647 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + R HPGR+ I E V+G+ G+ HP + + FE+ L + Sbjct: 648 PTKR------EGMHPGRTADILLDEE-VIGFIGQLHPEAQKQLDVKDTFV-FELSLVKVF 699 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ 754 + + T + S+ RD+A +V+ + AG + +I L+ +VT+FD+++ Sbjct: 700 AADTEETYYSAIPRFPSM---TRDMAVVVNTEVKAGEMKQVIAEAGGELLKEVTLFDLYE 756 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + EGKKS+A + T D+++ R++ V +K A LR Sbjct: 757 GEKMEEGKKSLAFSMNYFDPGRTLTDEEVTEAHSRVLAVVEEKFGAELR 805 >gi|30022635|ref|NP_834266.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus ATCC 14579] gi|229048267|ref|ZP_04193835.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH676] gi|229112024|ref|ZP_04241567.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock1-15] gi|229129843|ref|ZP_04258809.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-Cer4] gi|229147118|ref|ZP_04275477.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST24] gi|296505035|ref|YP_003666735.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis BMB171] gi|41018312|sp|Q817I7|SYFB_BACCR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29898193|gb|AAP11467.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus ATCC 14579] gi|228636367|gb|EEK92838.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST24] gi|228653534|gb|EEL09406.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-Cer4] gi|228671347|gb|EEL26648.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock1-15] gi|228722992|gb|EEL74369.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH676] gi|296326087|gb|ADH09015.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis BMB171] Length = 806 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|282858806|ref|ZP_06267951.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bivia JCVIHMP010] gi|282588375|gb|EFB93535.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bivia JCVIHMP010] Length = 822 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 252/839 (30%), Positives = 415/839 (49%), Gaps = 53/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D ++ EK+ + LTS GLEV +D R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFSLTPEKLAEALTSTGLEVGSLDEVETIRGGLKGLFVGKVLTCEMHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN--MIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + + + ++ K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEAQQIVCGAPNVDAGQKVIVADLGCVLYDGDKEFVIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y +L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYQLDSDWVIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A E ++ P ++ L IK ++++ C+ +A V Sbjct: 181 GVARDLYAWLKQNGYETSLHRPSCDAFYVDNHDLPIKVTIENTDACRRYACLSVTDCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L +GLR I+ +VDITNY+ G P H FDA +S + + V+ G+K Sbjct: 241 ESPKWLQDKLNVIGLRPINNIVDITNYIMWAYGQPMHCFDADMVSGNHIIVKDKNEGKKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ L ++ I ++ IAG+ GGK +G + T V++E A + P I +S Sbjct: 301 ITLDGEEHTLGEHDLAICNEKEPMCIAGVFGGKGSGTYETTKHVVLESAYFHPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D G + LK L L GG S +IC + Sbjct: 361 RRHGLSTDASFRFERGIDPNGTVYALKQAAILCKQLAGGKISMEICDEYPTPMADFPVRL 420 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILR 465 RL G + + I+ L + E + ++ VP++R DV+ D+VEEILR Sbjct: 421 NYEYCDRLIGKQIGTDTIKNIVTSLEMEIDKEDTEGLDLLVPAYRVDVKRPCDVVEEILR 480 Query: 466 IYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK-- 518 IYG + ++ L + + DK R V L E++N S Sbjct: 481 IYGYNNVEIPTTLKSSLTIAEEADK-----NYHRENVVSEQLVGAGFSEILNNSLTKASY 535 Query: 519 -EQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 EQ+ L E ++I+NP+SAD+ MR +LL G L++ N++R + FEV +VY Sbjct: 536 YEQTGLNKYPWEEAVKIMNPLSADLGVMRQTLLFGGLESLAHNINRKATNLRFFEVGNVY 595 Query: 577 E-------NDTP---EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 + D+P Q+Y A G IEGS W +EE ++ KA Sbjct: 596 KFTQDKYTEDSPIKAYNQEYHMALWLTGKH-IEGS---WVHPNEEST----FYELKAYVE 647 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 +++ V + S A ++ +KT ++ G +L ++ + Sbjct: 648 NILRR-VGVQQGVLVSEASDNNIFDKAIALKTRGGKLIVEMGILSIALLKRMEIAQKVFF 706 Query: 687 FEV-YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 E+ + + + I +K + + ++ LS V RDLA ++D + + I + + +L+ Sbjct: 707 AEINWTELMKIIRKNKLQFEE---LSKYPAVSRDLALLLDNAVEFAQIEEIARQTEKKLL 763 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A LR Sbjct: 764 KKVELFDVYQGKNLPEGKKSYAVNFILQDATKTLNDKAIDAIMQKLIKNLTTKLGAELR 822 >gi|160286089|pdb|2RHS|B Chain B, Phers From Staphylococcus Haemolyticus- Rational Protein Engineering And Inhibitor Studies gi|160286091|pdb|2RHS|D Chain D, Phers From Staphylococcus Haemolyticus- Rational Protein Engineering And Inhibitor Studies Length = 800 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 416/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V +E + + +T G+EV+ +D + + + + S E++PD D Sbjct: 1 MLISNEWLKDYVDAGVKVEDLAERITRTGIEVDNMIDYSKDIKNLVVGYIQSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P + G L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + +SES E+ +D+ ++ VK V +P Sbjct: 180 GTAYEVAALYQTEMTKPETQSNETSESATNELSVTIDNPEKVPYYSARVVKNVSIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 W++ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A E + LD Sbjct: 240 WVQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAKDEETMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 N E L ++VI++ ++AG++GG + + TT+V++E A++DP++I + + L Sbjct: 300 NNERKLVDTDIVISNGQEPIALAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ L G D + ++ I + Sbjct: 360 LRSEASSRFEKGIATEFVDEAVDRACYLLQELASGEVLQDRVSSGDLGSFVTPIDITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ ++ I +LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNKTIGFNLSNDEIQSIFRQLGFETTLKGETLTVNVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ L+ +Q +TR +K L + + + +S +SK+ + F +R Sbjct: 480 EIPS-SLPVFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 + +L P+S + +R SLLP L++AT NV R D ++E+ V+ E + P+ + Sbjct: 539 TISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K EE +D F AK V E +L+ +++G Sbjct: 599 YL-SGILTGEYVVNA----WQGKKEE----IDFFIAKGVVDRVAEKL-NLE-FSYKAGKI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I+ + G+ GE HP + L FE+ D++ + Sbjct: 648 EGLHPGRTAIVSLGGAGI-GFIGELHPQVAADNDLKRTYV-FELNYDAMMQVAVGYINYE 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 ++ V RD+A V+ +P+ L II N + ++ VFDV++G+ L +GKKS Sbjct: 706 QIPKFPG---VTRDIALEVNHDVPSSELKQIIHNNGEDILQSTLVFDVYEGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VAI++ +DT D+ + + D+I+E ++ A +R Sbjct: 763 VAIRLNYLDTEDTLTDERVSKIHDKILE-ALQAQGATIR 800 >gi|228941738|ref|ZP_04104285.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228974662|ref|ZP_04135228.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981256|ref|ZP_04141556.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis Bt407] gi|228778456|gb|EEM26723.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis Bt407] gi|228785065|gb|EEM33078.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817950|gb|EEM64028.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942343|gb|AEA18239.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis serovar chinensis CT-43] Length = 806 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIELQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|172058192|ref|YP_001814652.1| phenylalanyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] gi|171990713|gb|ACB61635.1| phenylalanyl-tRNA synthetase, beta subunit [Exiguobacterium sibiricum 255-15] Length = 798 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 247/829 (29%), Positives = 423/829 (51%), Gaps = 56/829 (6%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + WL++ +D + +++ D +T G+EVE V+ R+A L+ + +VL+ E++P+ Sbjct: 1 MLVSKQWLQEFVDVRHKTGQELADLITKSGIEVEGVEVRDADLNNIVVGRVLTKEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ + +Q+VCGAPNV G + A G+ +P + + K+RG+ S GM Sbjct: 61 DKLNVTTVDIGQEEPVQIVCGAPNVDAGQDVIVARVGARLP--GIKIKRAKLRGVVSEGM 118 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EK+ + D+ I G + + L L D ++++ LTPNRSDC+ + Sbjct: 119 ICSLEELGFEKKYIREDEQDGIHTFREPVTPGQDVLELLGLHDEVLELGLTPNRSDCLSM 178 Query: 172 RGIALDLVAAGLGKLKEI--NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A ++ AG+ + ++ P ++ S + ++ D S C +A ++ + Sbjct: 179 YGVAHEV--AGILNTTPVFPSVEVPEAASSTAVTVQLD---SEACTFYAAREIRDITIGE 233 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ RL A G+R I+ +VDITN+V L+ G P H FDA+++ + VR+A +GE Sbjct: 234 SPLWLKNRLIANGIRPINNVVDITNFVLLETGQPLHAFDANKLGQQIVVRQAKAGETFQT 293 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L P +VI R ++AG++GG + D TT +++E A + P ++ ++ + Sbjct: 294 LDEVERTLDPSMLVITDGERPVALAGVMGGANTEVDSATTSIVLESAYFAPTSVRKTSRV 353 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 LG+ +DS RFE+GVD + ++ L LI L GGT S A + + I Sbjct: 354 LGLRSDSSSRFEKGVDPRRVVLALDRAAMLIAELAGGTVLSGTAEAGTLQLEDHLIEGSV 413 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S + G+++ +LERLG V D VSVP+ RQD+ ADL EE+ R+YG Sbjct: 414 SYINHRLGMEIEGTVMKDLLERLGLEVELSADALTVSVPTRRQDLMIPADLAEEVARLYG 473 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + S L + + L + R ++++L + + + +S S+++++ F Q Sbjct: 474 YDALTSS---LPREASRGFLPKRNQHRRKMRQLLQGAGLSQAITYSLTSEQRAMQFNEQQ 530 Query: 529 --RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-----DTP 581 +++ PIS S +RTSL+PGLL+ NV R AD A +E+ VY +T Sbjct: 531 DLHPVKLAMPISEARSTLRTSLIPGLLEVAQHNVARQHADLAYYELGSVYLQRDASLETL 590 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRF 640 ++ M AGI G+ R+ + D F K ++ E +LD L + Sbjct: 591 PLEQEMLAGIM---VGLAEQHRVHGTHVK-----TDFFVIKGIVETLAE---ALDVPLTY 639 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVY---LDSIPI 696 E+ A HPGR+ I E + G+ G+ HP GLS G EVY LD++ + Sbjct: 640 EAAAMQSMHPGRTARILLDGEAI-GFVGQVHP------GLSKEEYGLKEVYVFELDAMAL 692 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQG 755 K +++ S+ RD+A ++D+ + A + +I + L+ V +FDV+ G Sbjct: 693 HSKVARVYQEISRFPSM---TRDVAIVLDRSVSASEVEAVIMQAAGPLLKQVELFDVYTG 749 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G +KS A + Q + T D+++ +++E + A LRS Sbjct: 750 DNVGADQKSFAFSLRYQNKERTLVDEEVTTAHQQVIEALQSSFKAELRS 798 >gi|289643243|ref|ZP_06475369.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia symbiont of Datisca glomerata] gi|289506948|gb|EFD27921.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia symbiont of Datisca glomerata] Length = 858 Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 256/881 (29%), Positives = 412/881 (46%), Gaps = 100/881 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE--RNPD 57 MK +SWL++ + + + D L G EVE V+ L+ + +VLS+E + Sbjct: 1 MKIVMSWLREVVPALPPAKAVADALIRAGFEVEAVEPVGHDLAGVVVGEVLSIELVQAKK 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +R+ + +V+CGA N VG A PG+ +P + RK G S GM Sbjct: 61 KNVRWVRVRVAETGTREVICGAFNFAVGDRVAVALPGAVLP-GGFTITARKTYGHLSEGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL + DD + I+ LP D PVG ++ LEL+D ++D+++TP+R + +RGIA + Sbjct: 120 ICSASELGIGDDHSGILVLPPDTPVGTDVAGLLELADDVLDIAVTPDRGYGLSIRGIARE 179 Query: 178 LV------------AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 AA E + + + ++D++ C + V GV Sbjct: 180 AATAFGLPFDDPAGAASEQAASEQAGAGQVGAGQGAAGYPVVVEDTAACGRYVARVVTGV 239 Query: 226 RNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 R + A P + +RL G+R IS VD+TN + L G P H FD +++S + VRRA G Sbjct: 240 RPDAATPLRLARRLALSGMRPISVPVDVTNLIMLGLGQPLHAFDRAKLSGPIVVRRAREG 299 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E+++ LD + +L P+++VIA D ++AG++GG +TT++L+E A +DP+ +A Sbjct: 300 ERLVTLDGVKRELDPEDLVIADDSGPVALAGVMGGASTEISTDTTEILIEAAHFDPVAVA 359 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 R+ + + +++ RFERGVD + + L+ L G TA + PR I Sbjct: 360 RTARRHQLGSEASRRFERGVDPALAPAAARAALRLLTELAGATAEAGVTDIDHRPAPRPI 419 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSV----------------------IGEYDKF 442 F E RL G P E R L +G +V +G+ Sbjct: 420 TFPLGETARLGGRPYPAEVVRRRLVEVGCTVADAGTDAVALPGAAVDLAGADSVGD-GAL 478 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V PSWR D+ ADLVEE++R+ G D I P+ L ++ R L+ Q R V L Sbjct: 479 LVVPPSWRPDLTRPADLVEEVMRLEGYDTI---PVTLPRLPAGRGLTQGQRIRRAVGTAL 535 Query: 503 ASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATG 557 A + +EV+ F+ + G + I NPI+ D +N+RT+LLPGL A Sbjct: 536 AHQGYVEVLTIPFVGDDTPDRLGLTSDDARAAVVRIANPIAEDAANLRTTLLPGLFAAAV 595 Query: 558 RNVDRAIADFAIFEVSHVYENDT----------------------------PEGQKYMAA 589 RN+ R D A+FE V+ PE + +A Sbjct: 596 RNIGRGQVDLALFETGLVFRATATTPVVTPPTPAVDHRPGDAEIAALNAVLPEQPRLVAV 655 Query: 590 GI--RKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + R+ +G G G+ W D VD A A V + V+ D+L Sbjct: 656 VLTGRREPAGWWGPGQPATWQDA-------VDAAHTVAAATGV-DLTVTADAL------- 700 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKT 704 + +HPGR + ++V GY GE HP ++ +GL C E+ LD++ I+ + T Sbjct: 701 TPWHPGRCARLSADGQVV-GYAGELHPRVIAAYGLPARTCAMELDLDTVLEIALARPPVT 759 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 V S+ P RD+A +V+ +P + + + L++ +T+FDV++G +GEGK+ Sbjct: 760 APAV--STYPPADRDIALVVEACVPVARVTEGLRRGAGDLLEALTLFDVYEGSQIGEGKR 817 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 S+A + ++ + T + D + + T AVLR+ Sbjct: 818 SLAFGLRLRAVDRTLTAQEANAARDAAIAEAARLTGAVLRT 858 >gi|160889844|ref|ZP_02070847.1| hypothetical protein BACUNI_02275 [Bacteroides uniformis ATCC 8492] gi|156860836|gb|EDO54267.1| hypothetical protein BACUNI_02275 [Bacteroides uniformis ATCC 8492] Length = 820 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 248/831 (29%), Positives = 414/831 (49%), Gaps = 39/831 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SVGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLKKPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A K + Sbjct: 361 RRHGLNTDASFRFERGIDPNATIYCLKLAALMVKELAGGTISSEIKDVCAA---PAKDFR 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 + +V L G +P++ I+ L ++ E + + VP +R DV+ D++E+ Sbjct: 418 VELAYEKVNSLIGKVIPVDTIKSIVTSLEMKIVDETAEGLTLDVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQ 520 ILRIYG + ++ + + K V L E++N S + Sbjct: 478 ILRIYGYNNVEIPTTLKSCLTTKGEYDKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYYD 537 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 ++ + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 538 NLESYPSKNLVMLLNPLSADLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCYHFNE 597 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSL 635 E PE K +AA G+ +G+ ++ +++ KA +V + + Sbjct: 598 EKKNPE--KVLAAYSEDYHLGLWVTGKRVTNSWAHPDENSSVYELKAYVENVFARLGLHM 655 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 L + Y G S ++T L FG +L F + N + Y D Sbjct: 656 HDLVVGNLTDDIYAAGLS--VQTRGGKRLATFGIVTKKLLKAFDIDNEV----YYADFNW 709 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDV 752 K + KV + +S VKRDLA ++D+ + + I + +L+ +V++FDV Sbjct: 710 KELLKAIRNVKVSYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSLFDV 769 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++GK+L GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 770 YEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKIMSKLVKNLEDKLNAKLR 820 >gi|322391539|ref|ZP_08065008.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] gi|321145622|gb|EFX41014.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus peroris ATCC 700780] Length = 805 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 244/821 (29%), Positives = 424/821 (51%), Gaps = 38/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV E++ + +++ G+EVE V++ A LS + +VL+ E P+ Sbjct: 5 MLVSYKWLKELVDIDVPSEELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLTCEDVPETH 64 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIR +ES GM+C Sbjct: 65 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRELESLGMIC 123 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 124 SLGELGISDSVVPKEFADGIQILPQDAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 183 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + D D + +A + V + Sbjct: 184 VAYE-VAAIYDKAVNFKEFTLTETDQDAADALSVSIDTDKAPY---YATRILDNVTIAPS 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 240 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGSEIRVREARAGEKLVT 299 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L+ ++VI + ++AG++GG+ + +T V++E A++D +I ++ Sbjct: 300 LDGEERELAEADLVITVTDKPVALAGVMGGEATEISEKSTRVVLEAAVFDGTSIRKTSGR 359 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 360 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGQLDTSDVEVSSTL 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G + F VSVP R D+ +ADL EEI RIYG Sbjct: 420 ADVNRVLGTELSYVDVEDVFRRLGFGLSGNAESFTVSVPRRRWDISIEADLFEEIARIYG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP++ L+ Q R V+ + + E++ ++ + E++V F Sbjct: 480 YDRLPAS-LPVSD-GTAGALTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFTIQP 537 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T ++ + Sbjct: 538 SNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPKEDL 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + VD F AK L + + L+ + + Sbjct: 597 PNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLEVTYTATSEIA 652 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKRTKT 704 HPGR+ +I + V+G G+ HP + + E Y+ + +S + Sbjct: 653 SLHPGRTALISLGDQ-VIGVLGQVHPVTAKAYDIP------ETYVAELNLSAIEAALQPA 705 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGK 762 V ++ V RD+A ++ + +V+ IK+ V RL + +FDVF G+ LG G Sbjct: 706 SPFVEITKFPAVSRDIALLLKAEVTHQDVVDAIKSAGVKRLT-AIKLFDVFSGEKLGLGM 764 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 765 KSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 805 >gi|254442528|ref|ZP_05056004.1| phenylalanyl-tRNA synthetase, beta subunit [Verrucomicrobiae bacterium DG1235] gi|198256836|gb|EDY81144.1| phenylalanyl-tRNA synthetase, beta subunit [Verrucomicrobiae bacterium DG1235] Length = 812 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 256/838 (30%), Positives = 413/838 (49%), Gaps = 62/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR--EALSPFTIVKVLSVERNPDL 58 MK +L WLK ++D D S +++ +LT +G EV+ ++ L + +VL +++PD Sbjct: 1 MKVSLKWLKRYVDLDESPKELAASLTLLGFEVDDMETTGVPPLENVVVGEVLQRDQHPDA 60 Query: 59 D-CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + R+D G E +VCGA N +VG A PG+ +P + K+RG+ S G Sbjct: 61 DKLGVCRVDCGSEIGEKSIVCGASNYKVGDRVPVALPGAELP-GGFKIKKSKLRGVPSDG 119 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 MMCS KE+ DD A ++ L G ++ L SD + ++ +TPNR DC+ GIA Sbjct: 120 MMCSGKEIGAGDDHAGLLILDKAPATGTPINQVLTDSDTVFNLEVTPNRPDCLSHIGIAR 179 Query: 177 DLVAAGLGKLKEINIS-CPLSSESIPLEIKFD---LDDSSLCKGFAMCCVKGVRNNVAPN 232 +L A ++ +++ P S E FD ++ S C + +KGV+ +P Sbjct: 180 ELAAWYRRDVRYPDVNDVPAESNRAKGEGIFDSVTVEASEDCPLYIASVIKGVKVGPSPQ 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALD 291 W+++ L A+GLR I+ +VD+TN+V + G P H FDA I+ + VR A GE + LD Sbjct: 240 WLKESLSAIGLRPINNVVDVTNFVMHECGNPMHAFDARDIAGGKICVRNAGEGEVMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E LS VVIA D + ++AG++GG+++ D+TTD+++EVA + P I K LG Sbjct: 300 GEERKLSNRMVVIADDDKALAVAGVMGGQNSEVKDDTTDLVLEVAYFKPSTIRWVSKKLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSE 410 + TDS YRFERGVD + + VSLIL GG S+ A + Sbjct: 360 LSTDSSYRFERGVDPLSLRYATERAVSLILETAGGALCSNGMTAGKEPVSQTDVEITPDW 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +++ SG ++ + LE L S+ +G D + VS+PS+R D+ DL+EE+LRI+G Sbjct: 420 IRKKSGFEITDAEIREALELLDMSISVGNDDVWTVSIPSYRGDLYRPVDLLEEVLRIFGT 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR---VLASRAMMEVVNWSFISKEQSVLFGG 526 D+I P QV + T +V++ L + E V ++ S E+ L+ Sbjct: 480 DKI-----PGGQVRATTTTASDSPITEFVRKSSAFLVGQNFSESVTYTLRSAEEQTLWAS 534 Query: 527 --GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 EL +LNPIS D + +R SLLPG+L+ N R + FE +++ + Sbjct: 535 HVSADELALLNPISEDQTQLRHSLLPGMLEVLHLNQSRKTGAYRFFETGRIFQELNGKIV 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES-- 642 + +A + + +GR W +K + D + AK + I + +D +F++ Sbjct: 595 EMVAVAFLECNG---ATGRTWKEKG-----YDDFYTAK-QRVKTIASYAGIDLSKFKTRP 645 Query: 643 ----------GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 G S Y ++G + L E +D G + G YL Sbjct: 646 VEENVSAWQEGHSSAYEEPKAGFFARMGLMNLSRIKE-----MDIQG--EVLAGIFCYLP 698 Query: 693 SIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVDRL------ID 745 + + KR K K SL P RDLA +VD++ A +V I + ++ Sbjct: 699 E-RLREPKRIKFKPF----SLFPASSRDLALVVDKNEQAEEVVRAIGKIATKASKGFDVE 753 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V+VFDV++G + KKS+A+ + + L T +D ++ D I + V +K+ +R Sbjct: 754 NVSVFDVYEGVGVPGDKKSIAVSMTFRALDRTLKDKEVNSAFDEIQKQVREKSPYGIR 811 >gi|228954828|ref|ZP_04116848.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228804817|gb|EEM51416.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 806 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|221231410|ref|YP_002510562.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] gi|220673870|emb|CAR68374.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae ATCC 700669] Length = 800 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 247/825 (29%), Positives = 427/825 (51%), Gaps = 47/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ +E Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGE-EERQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 119 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 178 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 179 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 235 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 295 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 355 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 415 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 474 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 475 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYTLTTPEKAVEFT 529 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV + A++E+ V+E T + Sbjct: 530 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVAHKNKNLALYEIGKVFEQ-TGNPK 588 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 589 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 641 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + + VLG+ G+ HP + + E+ L +I + + Sbjct: 642 ATSEIASLHPGRTAVI-SFGDQVLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 699 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 700 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 755 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 756 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 800 >gi|302342268|ref|YP_003806797.1| phenylalanyl-tRNA synthetase, subunit beta [Desulfarculus baarsii DSM 2075] gi|301638881|gb|ADK84203.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfarculus baarsii DSM 2075] Length = 802 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 246/827 (29%), Positives = 425/827 (51%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M L WL+ +D +V+ + + D L+ GLEVE + R + L KVL VE +P+ D Sbjct: 1 MLVPLKWLRQFVDYNVADQDLADLLSLSGLEVEGLQRRHQGLELVLAAKVLRVEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G+ + + VVCGAP V G + A G+ + E + + +IRG+ES GM+ Sbjct: 61 RLHLVTVDDGRAEHV-VVCGAPGVAPGQIVPLALEGAVLGE--LTIKRARIRGVESRGML 117 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE++L LSDD ++ L P+G L++ L L ++++S+TPNR D +GV G+A ++ Sbjct: 118 CSERDLGLSDDHGGLLNLDPTTPLGAPLTEALGLETAVMEISITPNRGDALGVLGVAREV 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A +++I+ + P + + ++ C+ + V+G +P W+R RL Sbjct: 178 GALLNLPVRDIDCAPPEDDQPVAALASVEIQAPDACRRYVARMVRGAVVGPSPLWLRDRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 A G+R I+ LVD+TNYV ++RG P H FD +R++ + VRRA + E LD Q+ L Sbjct: 238 AACGVRPINNLVDVTNYVMMERGQPLHAFDHARLAGGRIVVRRAVADEPFTTLDGQQRKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 ++I + ++AG++GG+++ + +T+DVL+E A ++P I R+ K LG+ ++S Sbjct: 298 QEGMLLICDAEKPVALAGVMGGQNSEIEAHTSDVLIESAFFEPGGIRRTAKALGMGSESS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-----KIVFMNSEVK 412 YRFERGVDL+G L+ L GG +C R Y PR I + Sbjct: 358 YRFERGVDLEGCAKAADRAAQLMAMLSGGR---VCAGRVDAY-PRPYQAPAIAVSAARTS 413 Query: 413 RLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L G+ + + R LE LG SV +G+ D P+ R D+E DL+EE+ RI G D Sbjct: 414 ALLGLPLDVAAIKRPLEALGLSVEAVGD-DSLTAWPPAARTDLERPVDLIEEVARIIGYD 472 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---KEQSVLFGGG 527 +I P + K Q R R ++ ++ ++ E +N+SF ++ L Sbjct: 473 KIPVS-TPCGVIGGKPRAREQLVRER-LRDLMTAQGFDEAINYSFGHPDWPDKLRLAADD 530 Query: 528 QRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG 583 R + + NP++ D S +RTSLLPGLL RN+ +AD A+FEV + D P+ Sbjct: 531 PRRGAVAMQNPLAEDQSALRTSLLPGLLGCVRRNLGHRVADVALFEVGKTFIARPDNPQP 590 Query: 584 QKYMAAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDA---KADALSVIEPFVSLDSL 638 + M R G+ G+ ++ ++E F + A A+A+ + +P ++ + Sbjct: 591 HESM----RLGAVLCGLAQPVSWFAGEAE--VSFAHIRGAVEYLAEAMGLADPRLAQEGP 644 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R P + G+ + + LG G + F + P+ ++ +D + Sbjct: 645 R-----PPYLEAGQW-LAVLVGQRRLGEIGLVAAQVAADFEVKKPVYYLDLDVDLLVQLT 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 +R + + HL V RD+A +VD+ + AG ++ + +L+ + +FDV++GK Sbjct: 699 PERGQFR---HLPRFPEVMRDVALVVDEAVAAGEVLAEARAWGGKLLREARLFDVYKGKP 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 L + +KS+ +++ + T +++I + +V +V++ A LR+ Sbjct: 756 LDKRQKSLGLRLTYRADDRTLTEEEIVPDFEAMVGRLVERFKAALRA 802 >gi|260887107|ref|ZP_05898370.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|330839119|ref|YP_004413699.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|260863169|gb|EEX77669.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] gi|329746883|gb|AEC00240.1| phenylalanyl-tRNA synthetase, beta subunit [Selenomonas sputigena ATCC 35185] Length = 810 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 248/831 (29%), Positives = 408/831 (49%), Gaps = 48/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ ++ WL D++D + E++ D T G+ VE V ++ L ++ +E NPD D Sbjct: 1 MQVSIEWLHDYIDFKETAEELADKYTMAGVPVENVVRADSGLDKVVTGRIEQLEPNPDSD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R++ G+ + + + GA NV G + A G+ +P N + + K+RGI S GM+ Sbjct: 61 HLLVCRMNVGQKELVTIQTGADNVHEGDIVPVALVGAHLP-NGLKIAKGKLRGIVSNGML 119 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L + + I LP D PVG S L L +++ LT NR DC V Sbjct: 120 CSAGELKLDESKLTEEQKNGIYILPPDTPVGIPASKVLGLDGVVLEFELTANRGDCFSVL 179 Query: 173 GIALD--LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+ + ++ G K EI + S + L I+ + LC F+ ++ V+ + Sbjct: 180 GLVREAAVLTGGEAKFPEIRVEEDASVRASDL-IEIGIAAPELCSRFSARVLQNVKIAPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P WM +RL+ G+R+I+ +VD+TN+V L+ G P H +D ++I+ LT R A GE++ Sbjct: 239 PAWMAKRLEDAGIRAINNVVDVTNFVMLELGQPMHAYDWAQIAGKKLTARLAAKGEELHT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ +VIA + +AG++GG + D T V++E A ++ +I R + Sbjct: 299 LDDSSRRAKGTELVIADAEKAAGLAGVMGGLESEVTDATQTVVLEAAAFNGASIRRMSRA 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 LG+ +++ RFERGVD+ + L L+ + T AS + P ++ F Sbjct: 359 LGLRSEASGRFERGVDVAHTVRALDRAAQLLQQMGACTVASGVVDVYPTPKAPVEVTFTA 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + V G ++ + RILE+LGF+V E + VPSWR DV D+ EE+ RI+G Sbjct: 419 AAVNARLGTEIEGAEMKRILEKLGFAVREESSSYIACVPSWRSDVTLMEDISEEVARIHG 478 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF-----ISKEQSVL 523 D+I + V+ +++ L S +K +L M E V++SF K Q Sbjct: 479 YDKIAATRPRGEAVQGRQSERL--SFIGRIKEILTGLGMTETVSFSFTHPSMFDKMQVPQ 536 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------E 577 +R + I+NP++ + +RT+LL LL+ RN R D +FEV+ ++ Sbjct: 537 ASALRRAVPIMNPLTDEYPLVRTTLLSSLLENAQRNFSRKNEDLRLFEVAPIFVPKELPV 596 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VS 634 + PE + AG+ G G W+ +E VD +D K V+E +S Sbjct: 597 TEQPE-EIVKLAGLLAGRRHPIG----WNQDTEA----VDFYDVKG----VVEELLARLS 643 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + ESG HPG++ K E V+ GE HP +L G+ FE+ ++++ Sbjct: 644 IANYTVESGEHFALHPGKTAFFKKGRE-VIAVLGEVHPAVLKALGIHKKAYIFEMDVETL 702 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVF 753 K R K + L + RDLA +VD+ A L I K+ + D+ +FDV+ Sbjct: 703 ---LKYRAKNFRYEPLPRFPAISRDLALLVDEQTDAAQLARTIEKSAGKFFKDLHLFDVY 759 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ + EGKKS+A V Q T +D++ + +I+ + K+ A LR+ Sbjct: 760 TGEQVAEGKKSMAFSVDFQSADKTLKDEEADEAVAKILAALQKECGAELRA 810 >gi|321312396|ref|YP_004204683.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] gi|320018670|gb|ADV93656.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis BSn5] Length = 804 Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 241/824 (29%), Positives = 416/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGAEAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 NGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGNDALAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K P +SE I ++D + +K V Sbjct: 177 MNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE LS D++VI + + Q++AG++GG + ++T +L+E A ++ + ++ Sbjct: 297 VTLDDQERKLSADHLVITNGMKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQTVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 K+LG+ ++S RFE+G+D + + LI GG + ++T + I Sbjct: 357 KDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ L I +RLGF+V + V+VPS R D+ + DL+EE R+ Sbjct: 417 SADKVSSVLGLTISKEELLSIYKRLGFTVGEAGELLVVTVPSRRGDITIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + + +S +++++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKAAAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL + N+ R A++EV V+ E DT Sbjct: 535 EKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + AG G +LW + + VD F AK +++ LDS+ F Sbjct: 595 VETERVAGAVTGL----WRKQLWQGEK----KPVDFFVAKGIVEGLLDKLNVLDSIEFVQ 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + ++ G+ G+ HP++ + E Y+ + + Sbjct: 647 SERKQLHPGRTANILLNGSLI-GFIGQVHPSLEKELDIK------ETYVFELDLHALLAA 699 Query: 703 KTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +T +V+ + +P V RD+A + D+ + +G L ++IK V +L+ +VTVFDV++G+ + Sbjct: 700 ETAPLVYTAIPKYPSVTRDIALVTDKTVTSGQLESVIKEVGGKLLKEVTVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQAVLR 803 >gi|118479707|ref|YP_896858.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis str. Al Hakam] gi|196044934|ref|ZP_03112168.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus 03BB108] gi|225866534|ref|YP_002751912.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus 03BB102] gi|229186813|ref|ZP_04313968.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BGSC 6E1] gi|118418932|gb|ABK87351.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus thuringiensis str. Al Hakam] gi|196024422|gb|EDX63095.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus 03BB108] gi|225785879|gb|ACO26096.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus 03BB102] gi|228596550|gb|EEK54215.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BGSC 6E1] Length = 806 Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+GY G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGYIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|225860584|ref|YP_002742093.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae Taiwan19F-14] gi|298229187|ref|ZP_06962868.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255845|ref|ZP_06979431.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502376|ref|YP_003724316.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|225727817|gb|ACO23668.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae Taiwan19F-14] gi|298237971|gb|ADI69102.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae TCH8431/19A] gi|327390320|gb|EGE88661.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA04375] Length = 801 Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 245/825 (29%), Positives = 426/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVESVESPAADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP + G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENTVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIGTDKAPY---YAARILDNVIIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPR 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E+ L +I + + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIPETYVA-ELNLSAIEAALQP 700 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 T V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 701 AT---PFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQVSLEEKVNAEVR 801 >gi|228967657|ref|ZP_04128678.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar sotto str. T04001] gi|228792033|gb|EEM39614.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar sotto str. T04001] Length = 806 Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFANLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMIEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L I + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKIFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|184201206|ref|YP_001855413.1| phenylalanyl-tRNA synthetase subunit beta [Kocuria rhizophila DC2201] gi|183581436|dbj|BAG29907.1| phenylalanyl-tRNA synthetase beta chain [Kocuria rhizophila DC2201] Length = 850 Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 249/827 (30%), Positives = 401/827 (48%), Gaps = 70/827 (8%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDN-REALS-PFTIVKVLSVERNP 56 M+ LSWL+++ + D + E + TL +GLE E V ++LS P + +VL++E Sbjct: 1 MRIPLSWLREYAPVPEDATAEDVLATLVKVGLEEEDVHRPTDSLSGPIVVGQVLTMEPET 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N VG V PG+ +P Sbjct: 61 HSNGKTVNWCTVRVVPEGREQTLTGKGIEPSGVQGIICGAHNFSVGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + +D I+ L +D +G + L L D Sbjct: 120 GDFRISARKTYGHTSAGMIASVRELGIGEDHDGILVLSRLGLDPEIGSDAMELLGLYDSA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSE-SIPLEIKFDLDDS 211 +V++TP+R +RGIA + A + E+ S P ++ P+ I DD+ Sbjct: 180 AEVNVTPDRGYAFSLRGIAREYCNAVRAPFTDPVAELAPSVPAPTQDGFPVSI----DDA 235 Query: 212 SLCKG------FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPS 264 + G FA+ V+GV ++ P W+ RL+ G+RS+S VDI+NYV L+ G P Sbjct: 236 APIHGRAGSNRFAVRVVEGVDPSLPTPPWLASRLRLAGIRSVSLPVDISNYVMLEYGQPI 295 Query: 265 HVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 H +DA + +TVRRA +GE + LD + L +++VIA + +AG+IGG Sbjct: 296 HTYDADTLQGGITVRRATAGETLTTLDGKNRTLDTEDLVIADESGAVGLAGVIGGAATEV 355 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 +TT +LVE A +D ++IAR+ + + +++ R+ERGVD Q + +V L++ L Sbjct: 356 SGSTTRILVEAARFDEVSIARTARRHKLPSEASKRYERGVDPQLAPVAAQRVVDLLVELA 415 Query: 385 GGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 G T + + T P + G+D E R L +G V D + V Sbjct: 416 GATDTGRVTDVDHTQPPTPVELPAGYPAARVGVDYSPEAVERALTAIGAQVTDTADGWTV 475 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 + PSWR D+ +K DLVEE+ R+ G D+I P L R + Q+ R V LA+ Sbjct: 476 TPPSWRPDLLDKEDLVEEVARLDGYDRI---PDRLPVAPPGRGFTRSQAARRRVATTLAA 532 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQ----RELEILNPISADMSNMRTSLLPGLLKATGRNV 560 + EV+++ F+++ + L+G + + + NPIS +R S+LPGLL+ RN Sbjct: 533 AGLTEVLSYPFVAQADNDLWGSPEGAHVPSIRLANPISEAQPLLRVSILPGLLEVLKRNQ 592 Query: 561 DRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 R D A++E+ HV+ E TP+ Q G+R +E + + + Sbjct: 593 SRGFRDLALYEIGHVFLAEGYTPDTQPVPPLGVRPMGPDLERLHAAVPAQPRKLAAVLAG 652 Query: 619 FDAKA------------DALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVL 664 DA A DAL V E L E G +HPGR+ ++T+ V+ Sbjct: 653 HDAAAGPWVTPRRWDWQDALDVAELAARSMGLELEVVQGRHEAFHPGRTAQLRTADGTVV 712 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFI 723 G GE HP ++ GL C E+ L ++ +R V S +P +D+A + Sbjct: 713 GVAGELHPKLVAAEGLPERTCAVELDLTAL----LEREAPVVVAQSISGYPAATQDVALV 768 Query: 724 VDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 VD+ + A L+ +++ L++ VFDV+QG + EGKKSVAI + Sbjct: 769 VDREVSAAALLATVRDGAGDLLESAEVFDVYQGTGIPEGKKSVAIAL 815 >gi|171779646|ref|ZP_02920602.1| hypothetical protein STRINF_01483 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281748|gb|EDT47182.1| hypothetical protein STRINF_01483 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 813 Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 243/824 (29%), Positives = 423/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + E L+ + V+S E P+ Sbjct: 13 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSSPSEGLTKLVVGHVVSCEDIPETH 72 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 73 LHLCQVDTGDDELRQIVCGAPNVTAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 131 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L + S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 132 SLQELGLPESIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 191 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 192 VAHE-VAAIYGKEVHFPEKELKEVSKAAKDVIDVAI-----ESDKVLTYKARVVENVTVK 245 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ D + R A +GEK+ Sbjct: 246 SSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNARAGEKL 305 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L+ +++VI + ++AG++GG+ D+ + +V++E A++D I R+G Sbjct: 306 VTLDGEERELTEEDLVITVADKPVALAGVMGGQATEIDNASKNVVLEAAVFDGTAIRRTG 365 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 L + ++S RFE+G++ + L +++ L G ++ R + P + V Sbjct: 366 SRLNLRSESSARFEKGINYATVDEALDFAAAMLTELAEG---EVLSGRVKVGSVPTEDVE 422 Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +++ + ++ G ++ D + +LGF + G DKF VSVP R D+ +ADLVEEI Sbjct: 423 VSTTLDYVNVRLGTELTFADIEDVFAKLGFGLSGNADKFTVSVPRRRWDIAIQADLVEEI 482 Query: 464 LRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 RIYG +++ P L Q L+ Q R ++ + + E+V+++ + E++ Sbjct: 483 ARIYGYEKL---PTTLPQAAGTAGELTATQKLRRKMRSIAEGSGLTEIVSYALTTPEKAT 539 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ ++E Sbjct: 540 EFTLQPSNLTELMWPMSVERSVLRQNVVSGMLDTIAYNVARKNSNLAIYEIGKIFEQKGN 599 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++ + I + I SG + + + VD F AK ++ E Sbjct: 600 PKEE-LPNEISTFAFAI--SGLVAEKDFQTKATPVDFFYAKGIVEAIFNKLDLTVEYVAE 656 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 G S HPGR+ I ++V G+ G+ HP + + E+ LD I + + Sbjct: 657 KGLESM-HPGRTASIYLDGQLV-GFVGQIHPQTAKNYNVPETYVA-ELNLDIIEAALQ-- 711 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLG 759 K V ++ V RD+A ++ +V I++ V RL D+ +FDV+ G ++ Sbjct: 712 -ADKAFVEITKFPAVSRDIALLLPATTTHKEIVAAIESAKVKRLT-DIKLFDVYAGANIA 769 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EG KS+A + Q D D+++ MD+I + +V++ A +R Sbjct: 770 EGMKSMAYSLTFQNPNDNLTDEEVTKYMDKITKVLVEQLGAEVR 813 >gi|218297073|ref|ZP_03497750.1| phenylalanyl-tRNA synthetase, beta subunit [Thermus aquaticus Y51MC23] gi|218242628|gb|EED09165.1| phenylalanyl-tRNA synthetase, beta subunit [Thermus aquaticus Y51MC23] Length = 783 Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 241/808 (29%), Positives = 396/808 (49%), Gaps = 56/808 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTI-VKVLSVERNPDLD 59 M+ SWLK+++ S E + + L +G E ++V+ + P + +VL P Sbjct: 1 MRVPFSWLKEYVPELESPEVLEERLAGLGFETDRVERLFQIPPGVVFARVLEAHPVPGTG 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L +D G + ++VV GA N R G+ A PG+ + + V R I+G+ S GM Sbjct: 61 LKRLVLDAG--EVVEVVSGAENARAGIGVALALPGTEL--QGLKVGERVIQGVRSFGMAL 116 Query: 120 SEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S KEL + + ++E P +A P G L++ + ++++ +TPNR D +G+ G+A DL Sbjct: 117 SPKELGVGEYGGGLLEFPAEALPPGTPLAEAWP-EEVVLEIEVTPNRPDALGLLGLARDL 175 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G + P +E++PL + +++D F + G+R +P +++ L Sbjct: 176 HALGYAL---VEPQVPYRAEALPLPFRLEVEDPLGAPHFTLAYAFGLRVGPSPIPLQRAL 232 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A G+R IS +VDITNYV L+R P H FD + + + VRRA GE++ LD E L Sbjct: 233 FAAGMRPISNVVDITNYVMLERSQPMHAFDLRFVGEGILVRRAREGERLRTLDGVERALH 292 Query: 299 PDNVVIASDGRIQS----IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 P+++VIA+ +S +AG++GG + +T + +EVA +DP+ I ++ + G+ T Sbjct: 293 PEDLVIAAMKGEESLPIGLAGVMGGAESEVRADTEAIALEVACFDPVAIRKTARRHGLRT 352 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++ +RFERGVD G IP K +SL+ +L G ++ + P I F L Sbjct: 353 EASHRFERGVDPLGQIPAQKRALSLLQALAGARVAEAILEVGNPSPPEPIPFRPQYANAL 412 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G P E + IL RLG V GE + V+ PS R D+ + DLVEE+ RI G + I Sbjct: 413 LGTQYPEEAQIGILRRLGCRVEGE-GPYWVTPPSHRLDLRLEEDLVEEVARIQGYETIPL 471 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 + D R + + +K +LA EV +SF E++ LF L + Sbjct: 472 DLPAFFPAPDNRGVEAPYRKEERLKELLAGLGFQEVYAYSFADPEEAPLFRLPPYPLRLK 531 Query: 535 NPISADMSNMRTSLLPGLLKATGRNV-----DRAIADFAIFEVSHVYENDTPEGQKYMAA 589 NP++ + + +RT L PGLLK N+ +RA+ +FE+ VY +A Sbjct: 532 NPLAPEKAALRTHLFPGLLKTLKENLALDRPERAL----LFELGRVYG---------VAG 578 Query: 590 GIRKGSSGIEGSGRLWSDK-----SEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESG 643 G+ + + + +G L+ D + E L +AL F L LR E+ Sbjct: 579 GLVEERTHL--AGLLFGDGLKLPWAREALSGFFLLKGYLEAL-----FRRLGLELRVEAH 631 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPG SG + E G+ G+ HP I L P+ FE+ ++P +K Sbjct: 632 PYPFLHPGVSGRVLVEGE-AKGFLGQLHPGIARALALP-PVWIFEL---TLPFPEKPLAF 686 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 + +L RDLA +V + P G + I+ ++++ +FD++QG L EG+ Sbjct: 687 RDPSRYPQAL----RDLAVVVPEATPYGEVERAIREAAGPYLEELALFDLYQGPPLREGE 742 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS+A + + + T +D+++ M I Sbjct: 743 KSLAFHLRFRHPERTLKDEEVDAAMAGI 770 >gi|78357676|ref|YP_389125.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|91208240|sp|Q30Y16|SYFB_DESDG RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78220081|gb|ABB39430.1| phenylalanyl-tRNA synthetase beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 800 Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 236/816 (28%), Positives = 411/816 (50%), Gaps = 42/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WL++ + + +++ D LT +GLE+E++ +A++ + VL R+P+ D Sbjct: 1 MLLSLNWLREFVPYTGTAQELGDRLTMLGLELEEIIRPFDAIADIVVGHVLECGRHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + + +VCGAPNV G A G +P + + + K+RG S GM+ Sbjct: 61 KLSVCRVDVGT-EVLDIVCGAPNVAAGQKVPVAKVGVTMP-SGLKIKKAKLRGQPSCGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL LSD+S IM LP D+ G RL D L+L D ++D+S+TPNR+DC+ V G+A ++ Sbjct: 119 CSESELELSDESDGIMVLPQDSVPGVRLVDLLQLDDTVLDISITPNRADCLSVLGLAREV 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A L + E ++ + D + C + ++G+ +P WMR RL Sbjct: 179 ALAFDLPLTMPQLELREQGEDAGSDVTIAIADGAQCPVYQGRIIEGISTCPSPLWMRHRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL 297 K+VG+R ISA+VD+TNY+ ++ G P H FD + + V A GE+ LD QE L Sbjct: 239 KSVGVRPISAIVDVTNYILMELGQPLHAFDLDLLEGARIVVETAAEGERFTTLDGQERVL 298 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +++I + ++AG++GG + +D + V +E A++ P I R+ + LG+ ++S Sbjct: 299 KASDLLIRDGAKAVALAGVMGGANTEINDASRRVFLECAVFKPATIRRTARRLGLSSESS 358 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD + L+ L GG +C A ++ ++ F + L G Sbjct: 359 YRFERGVDQVLSTFAMNRAAQLMCELSGGVLRPGVCRAEPAPWQAAQLRFRPARAAALLG 418 Query: 417 IDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 I + L++LG ++ G + ++ V+ PS R D+E +ADL+EE+ R+YG+D I Sbjct: 419 ISLDDGFCRETLQKLGCTLSGADTPEWTVTAPSHRHDLEREADLIEEVGRVYGMDNI--- 475 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISKEQSVLFG--GGQRE 530 P L +V S + R+ A + E VN+SF+ + G G R Sbjct: 476 PPVLPKVSKPLEQGRTDSEYEFWARIKAWGRGLGLNEAVNYSFVGHKDLDFLGLPAGNR- 534 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + I+NP++++ +RT L PGLL N+ + +FE++H++E D Q Sbjct: 535 ISIMNPLTSEQDVLRTELAPGLLNTLRHNLAQGSTGLQVFELAHIFEAD----QSSDTTA 590 Query: 591 IRKGSSGIEGSGRLWSD---KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G G+ G+ + D + EE + DL L V+ + +LR + SW Sbjct: 591 RESGRLGLLVYGQRYQDGWPRREEDAGYEDLKGIVEHLLRVLNLGPAAFTLRKDH---SW 647 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 P + + G G P+I D + + E+ LD++ RT + V Sbjct: 648 LLP---CVEIRVGSVCAGVAGRVKPDIADAYHARKDVWMAEIDLDAL------RTLCRDV 698 Query: 708 -VHLSSL---HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSL--GE 760 V S+L PVKRD+ + +P + + ++ + +L D+ + DVF+ ++ G Sbjct: 699 AVQFSALPVFPPVKRDITVMAPASVPVSAVTDHVRGMSLKLFSDIVLVDVFEPETPEGGT 758 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 ++++ ++ + + T +D ++ D++ E++ + Sbjct: 759 PERNLTFRLTFRHAERTLKDKEVDKERDKVAESLTE 794 >gi|270294100|ref|ZP_06200302.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. D20] gi|270275567|gb|EFA21427.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. D20] Length = 820 Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 250/832 (30%), Positives = 416/832 (50%), Gaps = 41/832 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SVGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K + P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKPATLKKPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--SDVLTVRRACSGEK 286 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I S+V+ V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGSEVI-VKTMPEGTP 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 300 FVTLDGVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPR 402 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A K Sbjct: 360 ARRHGLNTDASFRFERGIDPNATIYCLKLAALMVKELAGGTISSEIKDVCAA---PAKDF 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 ++ +V L G +P++ I+ L ++ E + + VP +R DV+ D++E Sbjct: 417 RVELAYEKVNSLIGKVIPVDTIKSIVTSLEMKIVDETAEGLTLDVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKE 519 +ILRIYG + ++ + + K V L E++N S + Sbjct: 477 DILRIYGYNNVEIPTTLKSCLTTKGEYDKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYY 536 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 ++ + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 537 DNLESYPSKNLVMLLNPLSADLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCYHFN 596 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VS 634 E PE K +AA G+ +G+ ++ +++ KA +V + Sbjct: 597 EEKKNPE--KVLAAYSEDYHLGLWVTGKRVANSWAHPDENSSVYELKAYVENVFARLGLH 654 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + L + Y G S ++T L FG +L F + N + Y D Sbjct: 655 MHDLVVGNLTDDIYAAGLS--VQTRGGKRLATFGIVTKKLLKAFDIDNEV----YYADFN 708 Query: 695 PISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 K + KV + +S VKRDLA ++D+ + + I + +L+ +V++FD Sbjct: 709 WKELLKAIRNVKVSYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSLFD 768 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++GK+L GKKS A+ L+Q T D I +M ++V+N+ K NA LR Sbjct: 769 VYEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKIMSKLVKNLEDKLNAKLR 820 >gi|325270934|ref|ZP_08137521.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella multiformis DSM 16608] gi|324986731|gb|EGC18727.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella multiformis DSM 16608] Length = 822 Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 254/842 (30%), Positives = 417/842 (49%), Gaps = 59/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D D++ ++ D LTS GLEV+ +D R L + KVL+ +P Sbjct: 1 MKISYKWLKEYVDFDLTPQETADALTSTGLEVDALDEVETIRGGLKGLFVGKVLTCGAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + +D GK Q+VCGAPNV G + A G + + + ++K +RG+E Sbjct: 61 NSDHLHVTTVDLGKGGPQQIVCGAPNVAAGQKVIVADLGCVLYDGDKEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +ID+ +T NR+D + Sbjct: 121 SFGMICAEDEIGVGTSHDGIIVLPEDAPVGQPAAEYYHLDSDWLIDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + + +P+++ ++++ C+ +A + G Sbjct: 181 GVARDLYAWLTQNGYKTSLHRPDCSAFRVDNHDLPVDVT--IENTDACRRYACLSITGCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G+ Sbjct: 239 VKESPKWLKDKLNVIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHRIIVKDKNEGK 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLAICNAEEPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TD+ +RFERG+D G++ L+ L L GG S T V Sbjct: 359 SARRHGLSTDASFRFERGIDPNGVVYALEQAAILCRELAGGKVSMEVRDEYPTKMEDFPV 418 Query: 406 FMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 +N E RL G + E RI E L V E + ++ VP++R DV+ D+VE+I Sbjct: 419 RLNYEYCDRLIGKKLGHETIRRIAESLEMRVQKEDAEGLDLLVPAYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR------VLASRAMMEVVNWSF-- 515 LRIYG + ++ +P E K +L++ + R R L E++N S Sbjct: 479 LRIYGYNNVE---IP---TELKSSLTIAEEADRNYHRENIIGEQLVGEGFSEIMNNSLSK 532 Query: 516 --ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +E + + ++++NP+SAD+ MR +LL G L++ RNV+R + FEV Sbjct: 533 SSYYEETELNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVG 592 Query: 574 HVY----ENDTPEG------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +VY E T E Q Y A G ++GS W+ EE ++ KA Sbjct: 593 NVYKYNKEKWTEESPIKAYVQDYHMALWVTGKR-VQGS---WAHPDEESS----FYELKA 644 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +V+ ++ L E + + ++ +KT VL G +L FGL Sbjct: 645 YVENVLRRIGIAQGLLVSEKSDNNVFD--KAIALKTRGGKVLVEMGILSHRLLKSFGLEQ 702 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR 742 + + LD + + R + +S V RDLA +VD + + I + D+ Sbjct: 703 KV--YYAELDWAGLMKAIRKNRLQFQEISKYPAVSRDLALLVDDKVEFAQIEEIARQTDK 760 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + V +FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A Sbjct: 761 KQLKRVELFDVYQGKNLPEGKKSYAVNFILQDESKTLNDKAIDAIMQKLIKNLTNKLGAE 820 Query: 802 LR 803 LR Sbjct: 821 LR 822 >gi|206969864|ref|ZP_03230818.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus AH1134] gi|229180878|ref|ZP_04308213.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus 172560W] gi|206735552|gb|EDZ52720.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus AH1134] gi|228602435|gb|EEK59921.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus 172560W] Length = 806 Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEAKFGAELR 805 >gi|229198710|ref|ZP_04325408.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus m1293] gi|228584732|gb|EEK42852.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus m1293] Length = 806 Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEVDNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + I L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTIFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVALALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLEGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|212693027|ref|ZP_03301155.1| hypothetical protein BACDOR_02534 [Bacteroides dorei DSM 17855] gi|212664394|gb|EEB24966.1| hypothetical protein BACDOR_02534 [Bacteroides dorei DSM 17855] Length = 820 Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 245/829 (29%), Positives = 411/829 (49%), Gaps = 35/829 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEVQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPGGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQSVL 523 IYG + ++ + + K + Q + L E++N S S + + Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGLE 540 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEKK 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ ++ ++ Sbjct: 601 NPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGNV 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG I F + N EVY I + Sbjct: 659 VFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWKE 711 Query: 699 -KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 K K+ KV LS VKRDLA ++D++I + I + +L+ +V +FDV++ Sbjct: 712 LMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEVELFDVYE 771 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK+L KKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 772 GKNLEPDKKSYAVSFLLQDESATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|288553665|ref|YP_003425600.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] gi|288544825|gb|ADC48708.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus pseudofirmus OF4] Length = 808 Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 232/824 (28%), Positives = 418/824 (50%), Gaps = 36/824 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL+D++ D V+ ++I + +T G+E++ V + + + V S E++P+ Sbjct: 1 MLVSYKWLQDYVKVDDVTPKEIAEKMTRGGIEIDFVHELNQGVRGVVVGYVRSCEQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + +Q+VCGA N+ G A G+ +P N + K+RG S GM Sbjct: 61 DKLNVCQVDIGEEEPVQIVCGAKNIAAGQYVAVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS E +L+ D + I + VG L L D ++++ LTPNRSDC+ + Sbjct: 120 ICSLQELGIESKLVHKDFAEGIYVFKEEVEVGADALALLNLDDTVLELDLTPNRSDCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A +++ +S + E I +++++ + +K V+ +P Sbjct: 180 LGVAYEVAALYDREVELPAVSLQTNDEHASDYIDVNVENTDDNPYYGAAIIKDVKVGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ RL A G+R IS +VDITNYV L+ G P H FD + S + VRRA GEK++ L Sbjct: 240 LWLQNRLTAAGIRPISNVVDITNYVLLEYGQPLHAFDYDKFGSKEVVVRRAREGEKMITL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E LS D+++I + + +IAG++GG+ + D TT +L+E A ++P + ++ ++L Sbjct: 300 DEAERALSTDHLLITNGEKPMAIAGVMGGQTSEVSDETTTILLEAAYFNPAAVRKASRDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ +DS RFE+GVD + + +LI LC GT + + + V +N Sbjct: 360 GLRSDSSARFEKGVDPSRVKAAGERAAALIAELCDGTIVSGVVESDQLNREEVQVHLN-- 417 Query: 411 VKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + R++ G D+ D I RL F+ + + +S P+ R D++ + DL EE+ R+Y Sbjct: 418 LPRMNNRLGTDISKADVEGIFNRLQFTYEDQGETLVISAPTRRGDIQIEEDLFEEVARLY 477 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG- 526 G D I + LP+ + L+ Q++ R V+R L S + + + +S S +++ F Sbjct: 478 GYDTIPT-TLPVGAT-TQGALTPYQAKRRRVRRYLESVGLTQAITYSLTSPKKAEGFAEE 535 Query: 527 --GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + + + P+S D S MRTSL+P L N++R D ++EV ++ T E + Sbjct: 536 SPAETAVRLAMPMSEDRSTMRTSLIPHLFDVLTYNLNRKNQDLHLYEVGSIF---TSEEK 592 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + + +G LW + + + VD F K + F D + F+ Sbjct: 593 VLTSQPVEREMVAAAFTG-LWLEHPWQGEKKPVDFFVVKGIVEGLFAEFGLEDQVSFKQA 651 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ +I + ++ G+ G+ HP+ L E Y+ + + Sbjct: 652 KRPKMHPGRTAVIMLN-DVEAGFIGQVHPSTEKEEDLR------ETYVFQLDLEMLLNVD 704 Query: 704 TKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + VV+ L ++RD+A +V+ + AG + +I L+ V +FD++QG+ + E Sbjct: 705 VEDVVYQGLPRFPSIQRDIALVVNSEVQAGEVEKLISQTGGSLLRSVQLFDLYQGEHMEE 764 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GKKS+A + + T D+D+ ++ ++++E + + A LRS Sbjct: 765 GKKSLAFSLTYLDPEKTLTDEDVTLVHEKVLEELQAQIGASLRS 808 >gi|319938128|ref|ZP_08012526.1| phenylalanyl-tRNA synthetase beta subunit [Coprobacillus sp. 29_1] gi|319806649|gb|EFW03298.1| phenylalanyl-tRNA synthetase beta subunit [Coprobacillus sp. 29_1] Length = 797 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 240/826 (29%), Positives = 408/826 (49%), Gaps = 53/826 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M+ +L L +++D +D + + +T IGLEVE + + V + +PD D Sbjct: 1 MEASLKLLNEYVDISDQDPAALAEMITRIGLEVEGMHELAHGDQLVVGYVKECQPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ Q+VCGAPNV G + A PG + E + KIRG S GM+ Sbjct: 61 HLNVCQVEVKPGVVTQIVCGAPNVSAGQKVIVALPGCNLGEG-FKIKEGKIRGEVSNGMI 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L +D A I L +AP+G YL L D I+D+ LTPNRSDC+ + Sbjct: 120 CSIAELGLDARLLKEEDKAGIHVLDEEAPLGEEALSYLGLKDYILDIGLTPNRSDCMAMT 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS--------LCKGFAMCCVKG 224 +A ++ A K+K +P K+D DS LC F +KG Sbjct: 180 SLAYEVAAVLNRKVK------------LPEVKKYDELDSDIRVIVETDLCPFFGAKLIKG 227 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+ +P W++ L A G++ I+ +VDI+NYV L+ G P H++D ++ + V + Sbjct: 228 VKTKESPQWLKNHLLASGIKPINNIVDISNYVMLETGQPIHMYDYDKMKEKSFVIKTGFH 287 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 +K + LD +EY+L P+++++++D I +AG++GG DDNT ++++EVA +D + Sbjct: 288 QKAVLLDEKEYELLPEDIIVSTDQGIGCVAGVMGGNDTKIDDNTRNIVIEVATFDGATLR 347 Query: 345 RSGKNLGIITDSRYRFERG-VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + + ++TD+ + +G ++ VL L++ ++ ++ + Sbjct: 348 NTARRMNLLTDASQHYIKGALNTANSFHVLDRCADLLVQEADAREIYKTVSTDLNVTEKI 407 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + ++ L G+ + + + I +RL FS + FEV VP++R D+ ADL+EE+ Sbjct: 408 VSVSQDKINGLLGMSIALNEIQDIFDRLSFSYTLKESTFEVVVPTYRNDITMAADLIEEV 467 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS-- 521 R+YG D I S LPL ++ + NL+ +QS R+++ VL + E + ++ S Sbjct: 468 ARMYGYDNIPS-TLPLMEMT-RGNLTPKQSNERFIRDVLVDLGLHETLTYTLTSPSTVND 525 Query: 522 -VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 LF ++++++P+ + S R S++P LL+ N A D +FE+S+ Y D Sbjct: 526 FNLFHPLDEQVKLMSPLGEERSVTRKSVIPSLLQVINYNQSHASKDVCLFEISNTYAKDE 585 Query: 581 PEGQKYMAAGIRKGS--SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 G+ +GI + + K FV+ K L + E SL + Sbjct: 586 ITTLAIACHGVYHSVPWAGIHRNVDFYLVKG-----FVETLFKK---LCIEESRYSL--V 635 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 R E+ + +HPGRSG IK +I+ G G+ HP + + + E+ L ++ Sbjct: 636 RVEADNKN-FHPGRSGYIKMGKQII-GVIGQIHPLMAKKYDIKGETVVAELNLSTL---L 690 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 +TK KV + V RD+A ++D I +V I+ +L+ +FDV++G+ Sbjct: 691 NLKTKALKVTSIPQYPSVNRDIALVMDTDIQTYDVVRSIQKAGKKLVSKAEIFDVYEGEH 750 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKSVAI + Q T D I +M+ I+ V + NA LR Sbjct: 751 IEEGKKSVAITLTFQDPTKTLEDTIINDVMENILAVVKSEYNAHLR 796 >gi|302541290|ref|ZP_07293632.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces hygroscopicus ATCC 53653] gi|302458908|gb|EFL22001.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces himastatinicus ATCC 53653] Length = 836 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 264/866 (30%), Positives = 419/866 (48%), Gaps = 91/866 (10%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L + GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPAGETGRDVQAKLVAAGLEVETVEQLGAGLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFAVGDKVVVVLPGAELP-GGFAISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP ++ VG + L+L D ++D+++TP+RS Sbjct: 118 TYGKTSHGMICSGDELGMGDDGSGGIIVLPPESEVGTDAIELLQLVDEVLDIAVTPDRSY 177 Query: 168 CIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 C+ +RGIA + A L++ +++ P +S P+++ D C F V G Sbjct: 178 CLSMRGIARETGIAYALPLRDPALLDVPAP-NSHGYPVKVA----DPVGCDRFTARTVTG 232 Query: 225 VRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + +P W+++RL+ G+R +S VDITNYV L+ G P H +D SR++ + VRRA Sbjct: 233 LDPEARSPIWLQRRLQKAGVRPVSLTVDITNYVMLEIGQPLHAYDRSRVTGAIGVRRAEP 292 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD-----NTTDVLVEVALW 338 GEK+ LD + L +++VI D +AG++GG D TT+V++E A + Sbjct: 293 GEKLTTLDGTQRVLDAEDLVITDDSGPIGLAGVMGGASTEIADVAETAGTTEVVIEAAHF 352 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 P+++AR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 353 APVSVARTARRHKLSSEASKRFERGVDPEATSAAAQRTVDLLVLLAGGTAEAGVTEILSP 412 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 P I +++G+ E +R L+++G V G D V+VPSWR D+ + D Sbjct: 413 GAPHTITLSADHPDKVAGVAYGRETVVRRLQQIGCDVYG-ADDLTVTVPSWRPDLRDPND 471 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EE++R+ G + + P L Q R L+ +Q R V R LA +E +N+ FI + Sbjct: 472 LAEEVIRLEGYENL---PSTLPQPPSGRGLTERQRLHRRVGRALAGAGYVEALNYPFIGE 528 Query: 519 EQSVLFGGG----QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 E FG +R+L ++NP+S +RT+LLPGLL A RN R D A+FE Sbjct: 529 EVLNQFGLAADDPRRDLVRLVNPLSDAEPALRTTLLPGLLAALRRNAGRGEHDLALFETG 588 Query: 574 HVYE--NDTPEG-----------------------QKYMAAGIRKG---SSGIEGSGRL- 604 V+ D P Q AA + G +G G G Sbjct: 589 LVFRATGDEPPAVRLAVDHRPTDEEIAQLDAALPSQPRRAAAVLAGDRQQAGWWGEGTPV 648 Query: 605 -WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SA 660 W+D E R V A+ + +I +R + AP +HPGR + Sbjct: 649 SWADAVEA-GRTV----AREAGVELI--------VRQDQQAP--WHPGRCAALLAVVDGE 693 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 EI++G GE H + GL C E+ LD + ++ H+S+ +D+ Sbjct: 694 EILVGNAGELHSRVTKALGLPERTCAMEIELDRL---ERAGGGAVTSPHVSTFPVATQDV 750 Query: 721 AFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A +VD A + ++ L++ + +FDVF G+ LGEGKKS+A + + T Sbjct: 751 ALVVDDSAAAADVEKALREGAGELLESLRLFDVFTGEQLGEGKKSLAYALRFRAPDRTLT 810 Query: 780 DDDIRILMDRIVENVVKKTNAVLRSS 805 +++ + D V + ++T A LR + Sbjct: 811 AEEVAVARDAAVASAAERTGAALRGA 836 >gi|182683517|ref|YP_001835264.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] gi|303253911|ref|ZP_07340032.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|303260076|ref|ZP_07346049.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|303261260|ref|ZP_07347208.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|303263925|ref|ZP_07349846.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] gi|303265916|ref|ZP_07351812.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|303268298|ref|ZP_07354095.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|182628851|gb|ACB89799.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus pneumoniae CGSP14] gi|301801455|emb|CBW34147.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus pneumoniae INV200] gi|302599087|gb|EFL66112.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS455] gi|302637394|gb|EFL67881.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS292] gi|302638771|gb|EFL69233.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP-BS293] gi|302642136|gb|EFL72486.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS458] gi|302644500|gb|EFL74751.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS457] gi|302646330|gb|EFL76556.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae BS397] Length = 801 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 246/827 (29%), Positives = 424/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVESVESPAADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKTIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDL-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 701 RTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 GALQPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|225854117|ref|YP_002735629.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae JJA] gi|225723897|gb|ACO19750.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae JJA] Length = 801 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 243/824 (29%), Positives = 423/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP + G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENTVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEVAADALSVGIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELTGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGVGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFTRLGLQVTYIATS 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEGAL 698 Query: 704 TKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKINAEVR 801 >gi|198284327|ref|YP_002220648.1| phenylalanyl-tRNA synthetase subunit beta [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667218|ref|YP_002426988.1| phenylalanyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] gi|198248848|gb|ACH84441.1| phenylalanyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519431|gb|ACK80017.1| phenylalanyl-tRNA synthetase, beta subunit [Acidithiobacillus ferrooxidans ATCC 23270] Length = 799 Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 255/830 (30%), Positives = 405/830 (48%), Gaps = 57/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WL++ L E+ LT G+EVE + D + + V SV +P D Sbjct: 1 MRVSVQWLRELLQISWDTEETARRLTMGGIEVEAIEDAAPSFRGVVVAAVRSVAPHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + +VCGA N+ G A PG+ +P + I +RG+ S GM+ Sbjct: 61 KLRVAEVDAGDGRLRTIVCGADNLAAGQRVPLALPGALLPGEHCIAT-SVLRGVSSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C+ EL + D S+ ++ L DAPVG L YL L D I+ + +TPNR D + V G+A DL Sbjct: 120 CAAAELGIDDGSSGLLVLDADAPVGADLRAYLGLDDQILTLGITPNRGDALSVAGVARDL 179 Query: 179 VAAGLGKLKEINISCPLSSESI--PLEI---------KFDLDDSSLCKGFAMCCVKGVRN 227 A G L + P + +I P E+ D + C+ + + ++GV Sbjct: 180 FALGAEALSLPTAAIPEPAWAIVRPGEVVPGNGGFAPHIAADAQNACRSYTVLWIEGVPE 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 + P+++R+RL+ G R I +VD+ N L+ G P H FDA + LTVR A GE + Sbjct: 240 RL-PDYLRERLRRAGQRCIHPVVDLLNLQMLETGQPLHAFDAEALQGNLTVRWAQIGETL 298 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD ++ L D +VIA D ++AGIIGG+ T +++E A + P I Sbjct: 299 DALDGRDLPLESDMLVIADDAGPVALAGIIGGRRTAVTAQTRSIVLESAFFQPGAIQGRA 358 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNITYKPRK 403 + LG+ TD+ RFERGVD + PV+ +L L + GTA C + R Sbjct: 359 RRLGLQTDAAMRFERGVDFT-LGPVMA-TRTLQLFVTLGTARLRTERSCTVLGQLPEHRP 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 I + + R+ G+D + L RLG V D ++ PS R D+ + DL+EE+ Sbjct: 417 IPLRRARLARILGMDYEDDVVETALTRLGLHVNRVPDGWQAIPPSHRFDLRIEVDLIEEV 476 Query: 464 LRIYGVDQIKS-------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 RIYG +++ + +PLP+T+ L + VL +R EV+ +SFI Sbjct: 477 GRIYGYERLPAHRPEGILQPLPMTRGPQAATL----------RSVLQARDYHEVITYSFI 526 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 S++ LF +LNP+SAD++ MR SL PGL++ N+ R IFE+ V+ Sbjct: 527 SRQAQHLFTPDADAPALLNPLSADLAVMRASLWPGLMQVLQFNMKRQQERVRIFELGRVF 586 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + GQ+ + G G++ E W+ E R VD +D K D +++ + D Sbjct: 587 SAN---GQRLVLGGCIVGTADRES----WA----EPLRAVDFYDLKGDVSALLALWPGTD 635 Query: 637 -SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 S R P+ HPG++ I V G G HP ++ + L F YLD Sbjct: 636 FSFRPLDAYPA-LHPGQAAEICVEDRRV-GVLGALHPTLVAEYDLDK--SPFFFYLDVEW 691 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 + T + LS ++RD+A ++ I AGT+++ ++ ++ +T+FD +Q Sbjct: 692 LGNL--TSISRFSSLSPFPALRRDIALVIPNDILAGTVLDTMRAAASGIVRSITIFDRYQ 749 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G SL G S+A +L+Q + T D +++ MDR++ V + + LR+ Sbjct: 750 GSSLVAGTYSLAFALLLQDVGRTLTDTEVQAEMDRLLVAVRQLGSIELRA 799 >gi|237725573|ref|ZP_04556054.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. D4] gi|229436260|gb|EEO46337.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides dorei 5_1_36/D4] Length = 820 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 245/829 (29%), Positives = 411/829 (49%), Gaps = 35/829 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEVQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPGGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQSVL 523 IYG + ++ + + K + Q + L E++N S S + + Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGLE 540 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEKK 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ ++ ++ Sbjct: 601 KPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGNV 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG I F + N EVY I + Sbjct: 659 VFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWKE 711 Query: 699 -KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 K K+ KV LS VKRDLA ++D++I + I + +L+ +V +FDV++ Sbjct: 712 LMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEVELFDVYE 771 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK+L KKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 772 GKNLEPDKKSYAVSFLLQDESATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|229192760|ref|ZP_04319718.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus ATCC 10876] gi|228590599|gb|EEK48460.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus ATCC 10876] Length = 806 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILIEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEAKFGAELR 805 >gi|52140947|ref|YP_085882.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus E33L] gi|66773889|sp|Q633N5|SYFB_BACCZ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|51974416|gb|AAU15966.1| phenylalanine--tRNA ligase, beta subunit (phenylalanyl-tRNA synthetase, beta subunit) [Bacillus cereus E33L] Length = 806 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVALALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|309799872|ref|ZP_07694078.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus infantis SK1302] gi|308116519|gb|EFO53989.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus infantis SK1302] Length = 801 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 424/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DVS +++ + +++ G+EVE V++ A LS + +VLS E + Sbjct: 1 MLVSYKWLKELVDIDVSSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVQETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPQEAVPGDEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + L + D D + + + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETDQVAADALSVSIDTDKAPY---YVARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGNDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + +T V++E A+++ +I ++ Sbjct: 296 LDGEERDLETNDLVITVADKPVALAGVMGGQATEISEKSTRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGSTVRKGIVSTGQLDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E + Sbjct: 531 IQPSHLTELMWPMTVDRSVLRQNMVSGILDTVAYNVARKNKNLALYEIGKVFEQ-IGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L+ + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLEVTYTATS 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S +K Sbjct: 646 EIASLHPGRTALISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEKAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + +V+ IK+ V RL + +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDIALLLKAEVTHQDVVDAIKSAGVKRLT-AIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|160944181|ref|ZP_02091411.1| hypothetical protein FAEPRAM212_01688 [Faecalibacterium prausnitzii M21/2] gi|158444857|gb|EDP21861.1| hypothetical protein FAEPRAM212_01688 [Faecalibacterium prausnitzii M21/2] gi|295105085|emb|CBL02629.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Faecalibacterium prausnitzii SL3/3] Length = 803 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 254/834 (30%), Positives = 425/834 (50%), Gaps = 62/834 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLK+ +D DV+ +++ + L S G EVE++ +A +S + K++ +E+ Sbjct: 1 MKVPFSWLKEFVDIDVTAQELEEKLFSCGFEVEELIPLDAGISKVVVGKIVEMEKQEGTH 60 Query: 60 CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G + EI++ GA N+++G A GS +P + + RK++G+ES GM+ Sbjct: 61 LTKCVVDCGAYGHEIRISTGAANMKLGDCVPTALDGSTLP-GGITIKARKMQGVESNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L+DD ++ LP D+ G ++ + L D I D+S+T NR DC V Sbjct: 120 CSGAELGLNDDLFPGSEVYGLLILPEDSVPGTDIAPVVGLDDYIFDISITANRPDCQSVL 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA LGK + ++ ++ P+ +K ++ LC + V+ +R Sbjct: 180 GIARE-VAAVLGKPLHMPAMDYKAVCEPDA-PITVK--VEAPELCPRYMAHYVRNIRMGE 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++ L GLRSIS +VDITN+ L+ G P H FD ++++ + VRRA GEKI+ Sbjct: 236 SPRWMKRHLALCGLRSISNVVDITNHTLLEMGQPMHAFDLNKVAGRTIDVRRAHEGEKIV 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E+ L+P+N+VI + ++AGI+GG ++G DDNTT +L E A + ++ ++ + Sbjct: 296 TLDEKEFTLNPNNLVICDAEKPVALAGIMGGANSGMDDNTTSLLFECATFARDSVRKTSR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS---DICIARNITYKPRKI 404 LG +DS R+E+GVD L + LI L CG + D+ R + K I Sbjct: 356 ALGQNSDSSARYEKGVDRYSPQLGLARALHLIQQLDCGDITTLEYDLTDGRPLERK--HI 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEI 463 V +++ + GI VP + + IL+RL F+V + D ++VS P +R DVE DL EE+ Sbjct: 414 VATPAKICGVLGITVPDQTMIDILQRLEFTVDVQADGSWDVSAPLYRDDVESFPDLAEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R YG D I L V + L+ Q + KR+LA++ E +F S + + Sbjct: 474 IREYGYDHIVPTFLNTASVTNG-GLNYDQKQQLKTKRLLAAQGFYEASTLAFYSNAELDM 532 Query: 524 FG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE- 577 ++ + ILNPIS ++S MRT L P +L N+ + A+ +FE++ VY Sbjct: 533 LHIPAEDEARKAIRILNPISENLSIMRTLLTPSMLNVIVDNLKKGNAEGRLFEMAPVYLA 592 Query: 578 -----NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 N+ P ++ + G + EE D F K AL + Sbjct: 593 KELPINEHPHERQTLCIG---------------AFGPEE-----DFFTVKG-ALEALAAG 631 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE-VYL 691 L + ++ +W HPG S + + + LG FG+ I ++ + +YL Sbjct: 632 FGL-TFDYQRETAAWLHPGISAAVYCNGK-RLGVFGKLANEINAELEIAKEQKDSQNIYL 689 Query: 692 DSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV 749 + ++ + LS PVKRDLA + + + G + I+ L+ +V + Sbjct: 690 GELDYEALMSCVEGELRYKPLSPYAPVKRDLALVCGEAVSCGEIEETIRKASPLVSEVKL 749 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD+++G +LG+GKKS+A + + K +++ ++ +I+ N+ K +R Sbjct: 750 FDIYRGANLGDGKKSMAFSLSLSDPKKEVSAEEVERVVKKILGNLKFKLGIEIR 803 >gi|153806615|ref|ZP_01959283.1| hypothetical protein BACCAC_00885 [Bacteroides caccae ATCC 43185] gi|149131292|gb|EDM22498.1| hypothetical protein BACCAC_00885 [Bacteroides caccae ATCC 43185] Length = 820 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 255/842 (30%), Positives = 433/842 (51%), Gaps = 61/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDAFKVENHDLDIEVTVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK--I 404 + G+ TD+ +RFERG+D G+I LK ++ L GGT +S+I +++ P K + Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAAIMVKELAGGTISSEI---KDVFTAPAKDFV 417 Query: 405 VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 V +N +V L G +P+E I+ L + E + +SVP +R DV+ D++E+ Sbjct: 418 VELNYGKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLSVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPL-----TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 ILRIYG + ++ P L T+ E+ ++ LQ V L E++N S Sbjct: 478 ILRIYGYNNVEI-PSTLKSSLTTKGENDKSNKLQN----LVAEQLVGCGFNEILNNSLT- 531 Query: 518 KEQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 ++ + G R + +LNP+SAD++ MR +LL G L++ N +R AD FE Sbjct: 532 --RAAYYDGLEAYPSNRLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEF 589 Query: 573 SHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADAL 626 + Y + D +K +A G+ +G+ W+ E +++ KA Sbjct: 590 GNCYYFDADKKNPEKVLAPYTEDYHLGLWVTGKKVVNSWAHPDESS----SVYELKAYVE 645 Query: 627 SVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 ++++ + L +L + + S + T L FG +L F + N Sbjct: 646 NILKRLGLDLHNLVVGNLTDDIFAAALS--VHTKGGKRLASFGVVTKKLLKAFDIDN--- 700 Query: 686 GFEVYLDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD- 741 EVY + + K ++ K+ + +S VKRDLA ++D+++ + I + + Sbjct: 701 --EVYYADLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEK 758 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +L+ +V +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A Sbjct: 759 KLLKEVELFDVYEGKNLEPGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAK 818 Query: 802 LR 803 LR Sbjct: 819 LR 820 >gi|228903077|ref|ZP_04067214.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis IBL 4222] gi|228856563|gb|EEN01086.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis IBL 4222] Length = 806 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQIQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFANLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMIEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A N+ R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNIARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L I + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKIFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|196042109|ref|ZP_03109393.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus NVH0597-99] gi|196027045|gb|EDX65668.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus NVH0597-99] Length = 806 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYSREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|168482817|ref|ZP_02707769.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] gi|172043783|gb|EDT51829.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1873-00] Length = 801 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 245/825 (29%), Positives = 423/825 (51%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVESVESPAADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVIIGTDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D++ P L + + L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDRL---PTSLPKYDGTAGELTATQKLRRQVRTIAEGVGLTEIITYTLTTPEKAVEFTAQ 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T ++ Sbjct: 533 PSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPREE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + VD F AK ++E + L+ A Sbjct: 592 LPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTYTAT 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 S HPGR+ I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 645 SEIASLHPGRTAAISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAA 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ L Sbjct: 698 LQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 757 GLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|229087113|ref|ZP_04219263.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-44] gi|228696181|gb|EEL49016.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-44] Length = 806 Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 239/828 (28%), Positives = 418/828 (50%), Gaps = 48/828 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGAPN+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAPNIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL +++ + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVAKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLS-----SESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A + VAA G+ + P + ++ I ++ + + VK V+ Sbjct: 180 LGVAYE-VAAIYGR----EVKLPAADLQEIADKTSDYISVSVEATEQNPLYIAKMVKNVK 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GE Sbjct: 235 IGPSPMWMQTRLMAAGIRPISNVVDITNYILIEYGQPLHAFDYDKLGSKEIVVRLAKEGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI LD+QE L ++ I + + ++AG++GG + D++T +VL+E A ++ + R Sbjct: 295 KIQTLDDQERTLQGHHLAITNGSKALAVAGVMGGAESEVDNDTVNVLIESAYFEGQTVRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKI 404 + K+LG+ ++S RFE+G+D ++H +L+ GG A + + N+ + R + Sbjct: 355 ASKDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEVDNLQVQERTV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +V R+ G ++ + I L F F V+VP R D+ DLVEE+ Sbjct: 415 SVTAEKVNRVLGTEISASEMGTIFTNLKFPFTEVEGTFHVNVPVRRPDITIAEDLVEEVG 474 Query: 465 RIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+YG D I P+ L T + L+ Q++ R V+R L + E + +S S +++ Sbjct: 475 RLYGYDHI---PVTLPTGTMTRGKLTAAQTKRRKVRRYLEGAGLYEAITYSLTSADKAKQ 531 Query: 524 FGGGQRELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 + E +N P+S + S +R SL+P LL+A N R A++EV ++ Sbjct: 532 YMVEPNEKSPVNLALPMSEERSQLRLSLVPQLLEAVSYNNARKNDSVALYEVGSIFLPTA 591 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 E + P+ ++++ AG+ G + W + + VD F AK V + Sbjct: 592 EGELPKEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVAKGVLEGVFDVLGVAS 642 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 S+ + HPGR+ I E V+G+ G+ HP + + FE+ L + Sbjct: 643 SITYAPAKREGMHPGRTADILLDEE-VIGFIGQLHPETQKQLDVKDTFV-FELSLVKVFG 700 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 + + T + S+ RD+A +V + AG + +I L+ +VT+FD+++G Sbjct: 701 ADVEETYYSAIPRFPSM---TRDMAVVVTTEVKAGEMKQVIAEAGGELLKEVTLFDLYEG 757 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + EGKKS+A + + T D+++ +R++ V +K A LR Sbjct: 758 EKMEEGKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTVVEEKFGAELR 805 >gi|311069354|ref|YP_003974277.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] gi|310869871|gb|ADP33346.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus atrophaeus 1942] Length = 804 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 241/827 (29%), Positives = 423/827 (51%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP 56 M + WL+D++D D S+ + + +T G+EVE ++ + E + I VL E++P Sbjct: 1 MFVSYRWLEDYVDLKGMDPSV--LAEKITRTGIEVEGIEYKGEGIKGVVIGHVLEREQHP 58 Query: 57 DLD----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + D C + D G + +Q++CGAPNV G A G+ +P N + K+RG Sbjct: 59 NADKLNKCLV---DIGADEPVQIICGAPNVEKGQKVAVATVGAVLP-GNFKIKKAKLRGE 114 Query: 113 ESTGMMCSEKEL-----MLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 ES GM+CS +EL ++S + A I P +A G L+L D I+++ LTPNR+ Sbjct: 115 ESNGMICSLQELGVEGKLVSKEYAEGIFVFPNEAEAGSDALAALQLDDAILELGLTPNRA 174 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 D + + G+A ++ A ++K +E I ++D + +K V+ Sbjct: 175 DAMNMLGVAYEVAAILEAEVKLPQTDYAEGAEKAADYISVKIEDQEANPLYTAKIIKNVK 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + +R+A E Sbjct: 235 IAPSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVIRKAAENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +L LD+QE LS D++VI + + Q++AG++GG + D+TT +L+E A ++ + + Sbjct: 295 TLLTLDDQERKLSADHLVITNGSKAQAVAGVMGGAESEVRDDTTTILLEAAYFNGQTVRK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKI 404 + K+LG+ ++S RFE+G+D + + LI GG S ++T + I Sbjct: 355 ASKDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLSGTAEENHLTIEANNI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +V + G+ + E+ + I +RLGF+V D V+VPS R D++ + DL+EE Sbjct: 415 HVSVEKVNNVLGMTISKEEMISIYQRLGFAVGEAQDLLIVTVPSRRGDIKIEEDLIEEAA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG D I S LP T+ L+ Q++ R V+R L + + +S +++++ F Sbjct: 475 RLYGYDNIPS-TLPETE-GTTGGLTPYQAKRRKVRRFLEGAGLSQATTYSLTNEKKAAAF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + L+ P+S + S +R SL+P LL++ N+ R A++EV V+ EN Sbjct: 533 AIEKSLHTKLSLPMSEERSILRHSLIPNLLESVSYNLARQTDSVALYEVGSVFLTKEENT 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P ++ +A + +G+ LW + + VD + K +++ L S+ Sbjct: 593 KPVEKERVAGAV----TGL-WHKNLWQGEK----KPVDFYVVKGIVEGLLDKLNMLTSIE 643 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 F HPGR+ I + +V G+ G+ HP + L E Y+ + + Sbjct: 644 FVQSERKNMHPGRTANILLNGSLV-GFIGQVHPTMEKELDLK------ETYVFELDLYAL 696 Query: 700 KRTKTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 +T+ VV+ + +P V RD+A + D I +G L ++IK +L+ +V+VFDV++G+ Sbjct: 697 LTAETEPVVYTAIPRYPSVTRDIALVTDTAISSGQLESVIKEAGGKLLKEVSVFDVYEGE 756 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +GKKSVA + + T ++++ +++++ + AVLR Sbjct: 757 HMEKGKKSVAFSLQYLNPEQTLTEEEVTKAHEKVLKALEDTYQAVLR 803 >gi|228923303|ref|ZP_04086591.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228836257|gb|EEM81610.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 806 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PVKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|206977752|ref|ZP_03238643.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus H3081.97] gi|217962041|ref|YP_002340611.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus AH187] gi|222098024|ref|YP_002532081.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus Q1] gi|229141287|ref|ZP_04269825.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST26] gi|206744053|gb|EDZ55469.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus H3081.97] gi|217067495|gb|ACJ81745.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus AH187] gi|221242082|gb|ACM14792.1| phenylalanine--tRNA ligase, beta subunit (phenylalanyl-tRNA synthetase, beta subunit) [Bacillus cereus Q1] gi|228642068|gb|EEK98361.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST26] Length = 806 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEVDNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + I L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTIFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVALALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLEGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|134101779|ref|YP_001107440.1| putative phenylalanyl-tRNA synthetase beta subunit [Saccharopolyspora erythraea NRRL 2338] gi|133914402|emb|CAM04515.1| putative phenylalanyl-tRNA synthetase beta subunit [Saccharopolyspora erythraea NRRL 2338] Length = 823 Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 258/832 (31%), Positives = 401/832 (48%), Gaps = 88/832 (10%) Query: 8 LKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVERNPDLDCAILR 64 + +HL+ + + E + + IGLEVE+V + ++ P + +V +E D I Sbjct: 1 MAEHLELPEETTAEALAEAFVRIGLEVEEVTHLSSVRGPLVVGRVAEIEELTDFKKPIRY 60 Query: 65 I-------DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++G+ + +++CGA N R G L V A PG+ +P I RK G S GM Sbjct: 61 CQVEVGEDESGEKRTQEIICGATNFREGDLVVVALPGTVLPGGFEIAE-RKTYGRMSRGM 119 Query: 118 MCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 +CS KEL + +D I+ LP A G + + L D +I++++TP+R C VRG+A Sbjct: 120 ICSAKELGIGEDHDGILVLPSGSADPGDDAVELVGLDDAVIELAITPDRGYCFSVRGLAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 +L A + S P+ ++ P ++ D S C F V GV P WMR Sbjct: 180 ELSNALEVPFGDPG-SLPVPADDRPSR-SVEIADPSACSRFVFRRVTGVDPTAPTPWWMR 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL G+RSIS VDITNYV L+ G P H +DA++++ + VRRA +GEK+ LD+ E Sbjct: 238 RRLALAGIRSISLAVDITNYVMLELGQPLHAWDATKLAGDIVVRRAKAGEKLTTLDDVER 297 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L PD+VVI D S+AG++GG T DVL+E A WDP +IAR + + ++ Sbjct: 298 ELDPDDVVICDDSGPVSLAGVMGGASTEIGSETHDVLLEAANWDPASIARMIRRHKLPSE 357 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRL 414 + RFER VD + PV + + +L G GT + P + + R+ Sbjct: 358 AGKRFERSVD-PAVAPVATELAAQLLVRYGEGTIAQGRTDVGEPKAPAPVTMPLALPDRI 416 Query: 415 SGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGV 469 +G++ + R L ++G + + D+ + PSWR D+ + ADLVEE+LR+ G Sbjct: 417 AGVNYERGVTARRLTQIGCRIEVSTSDEGVGLVTATPPSWRPDLAQPADLVEEVLRLEGY 476 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-- 527 I S L R L+ Q R R V R LA +EV+ + F E VL G G Sbjct: 477 HTIPSV---LPAAPPGRGLTPAQRRHRAVSRTLAHEGYVEVLPFPFTGPE--VLDGLGIG 531 Query: 528 -----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-- 580 +R L +LN + +D S + T++L GL+ A RNV R D A+F V V + Sbjct: 532 ADDPRRRTLSLLNALESDRSELSTTVLTGLIDALKRNVARGRRDLALFHVGQVVQPAAEQ 591 Query: 581 ---------------------------PEGQKYMAAGIRKGSSGIEGSGR--LWSDKSEE 611 P + AG R+ +G G GR W+D E Sbjct: 592 PAVPRVGVSQRPSDAEIEALHASLPAQPTHVGVVLAGQRE-HAGWWGKGREVSWADAVEA 650 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 R + L +G + +HPGR +K + V+G+ GE H Sbjct: 651 ARRVAAAAGVE---------------LTISAGDLAPWHPGRCAELKV-GDTVVGHAGELH 694 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P +++ GL C E+ LD++P++ + +S+ PV D+A +VD +P+ Sbjct: 695 PKVVEALGLPKRTCAMELDLDALPLTDDRPAPV-----VSAYPPVLLDIALVVDASVPSA 749 Query: 732 TLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 LV+ + K L++DV +FDV+ G+ L GKKS+A+ + + T + D+ Sbjct: 750 ELVDTVRKGAGELVEDVRLFDVYSGEQLESGKKSLAMALRFRAPDRTLKQDE 801 >gi|325674245|ref|ZP_08153934.1| phenylalanyl-tRNA synthetase beta subunit [Rhodococcus equi ATCC 33707] gi|325554925|gb|EGD24598.1| phenylalanyl-tRNA synthetase beta subunit [Rhodococcus equi ATCC 33707] Length = 829 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 262/836 (31%), Positives = 421/836 (50%), Gaps = 83/836 (9%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL D L + VS E++ +GLEVE+VD E ++ P + +VL +E Sbjct: 1 MRVAQSWLTDILQRTTPEWQVSPEELDAGFVRVGLEVEEVDTLEPVTGPLVVGRVLEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++D G + ++VCGA N G L + A PG+ +P I + RK G Sbjct: 61 LTEFKKPIRFCKVDVGADEPQEIVCGARNFAQGDLVIAALPGAVLPGGFAIAS-RKTYGK 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GMMCS EL + D + I+ L P A G + L L D +I++++TP+R C V Sbjct: 120 VSNGMMCSASELGIGKDHSGILVLEPGTAEPGTDANVLLGLDDTVIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L + + PL S E+ P+ L+ S F + G+ Sbjct: 180 RGLTRELACGFDLEFADPAAIAPLPSDGGEAWPI----TLEPESGATRFTARRITGIDPK 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA+++ L VRRA +GEK+ Sbjct: 236 AVSPWWLQRRLLMSGVRPISPAVDVTNYVLLELGQPLHAFDAAKVQGGLVVRRAQAGEKL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L ++VVIA D S+AG++GG D TTD+L+E A WDP+ + ++ Sbjct: 296 TTLDGIERALDAEDVVIADDSGAVSLAGVMGGASTEVHDGTTDILLESATWDPLAVFKTS 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +I+++ R+ER VD + +P L +L++ + GGT + P + M Sbjct: 356 RRHKLISEASKRYERVVDPEVALPALDRAAALLVEIAGGTVEPVLTDIG-GVTPAGQIRM 414 Query: 408 NSEVK-RLSGIDVPIEDSLRILERLGFSV---IGE--YDKFEVSVPSWRQDVEEKADLVE 461 + ++ R++G+ P + R L ++G +V + E + + V+ PSWR D+ + ADLVE Sbjct: 415 DIDLPDRVAGVAYPNGTAARRLTQIGCTVEVGVSETGHGQLVVTPPSWRPDLTQPADLVE 474 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G++QI S L R L+ QQ R R V R+LA+ +EV+ F+ Sbjct: 475 EVLRLEGLEQIPSV---LPHAPAGRGLTPQQRRRRAVGRMLAASGCVEVLPPVFLPHAVF 531 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 +G + ++LNP+ +D + ++LLPG+L+ RNV R D A++ V+ V Sbjct: 532 DTWGLDADDPRRNTTKVLNPLESDRPELASTLLPGMLEVLARNVARGQRDVALYGVAQVV 591 Query: 577 E--NDT------------------------PEGQKYMA---AGIRKGSSGIEGSGRLWSD 607 + DT P ++A AG+R+ SG G GR Sbjct: 592 QPGPDTKPVEALPVDRRPTDEQIAELMGSLPAQPLHVAVVLAGLRE-PSGPWGPGR---- 646 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + E L ADA V V L + ++ +HPGR + +V G+ Sbjct: 647 -AVEAADAFALVRTIADACGVA---VELRAAQYLP-----WHPGRCAEVVFDGTVV-GHA 696 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP +L+ GL C E+ LD++P+ T+ +S V +D+A +VD Sbjct: 697 GELHPAVLERAGLPARTCAVEIDLDALPV-----TEVLPAPRISPFPAVLQDVAVVVDAS 751 Query: 728 IPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 +PA + +++ L++D+ +FDVF+G+ +GEG+KS+A + + T +D+ Sbjct: 752 VPAAAVEAALRSGGGELLEDIRLFDVFEGEQVGEGRKSLAFALRFRGADRTLTEDE 807 >gi|237709833|ref|ZP_04540314.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 9_1_42FAA] gi|229455926|gb|EEO61647.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 9_1_42FAA] Length = 820 Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 243/829 (29%), Positives = 411/829 (49%), Gaps = 35/829 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEVQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RG+E Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPGGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQSVL 523 IYG + ++ + + K + Q + L E++N S S + + Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGLE 540 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEKK 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ ++ ++ Sbjct: 601 NPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGNV 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG I F + N EVY I + Sbjct: 659 VFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWKE 711 Query: 699 -KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 K K+ KV LS VKRDLA ++D++I + I + +L+ ++ +FDV++ Sbjct: 712 LMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEIELFDVYE 771 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK+L KKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 772 GKNLEPDKKSYAVSFLLQDESATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|42783732|ref|NP_980979.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus cereus ATCC 10987] gi|66773921|sp|Q72ZI2|SYFB_BACC1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|42739662|gb|AAS43587.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus ATCC 10987] Length = 806 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 415/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSTDKAKQYMVEP 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A NV R A++EV ++ E + P Sbjct: 537 NEKAPVALALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEEGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|30264629|ref|NP_847006.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Ames] gi|47530099|ref|YP_021448.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. 'Ames Ancestor'] gi|49187450|ref|YP_030702.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Sterne] gi|49478689|ref|YP_038608.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus thuringiensis serovar konkukian str. 97-27] gi|65321927|ref|ZP_00394886.1| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Bacillus anthracis str. A2012] gi|165871501|ref|ZP_02216148.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0488] gi|167635568|ref|ZP_02393880.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0442] gi|167641590|ref|ZP_02399837.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0193] gi|170688275|ref|ZP_02879485.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0465] gi|170708698|ref|ZP_02899136.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0389] gi|177653173|ref|ZP_02935460.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0174] gi|190566849|ref|ZP_03019765.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|196034507|ref|ZP_03101916.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus W] gi|218905786|ref|YP_002453620.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus AH820] gi|227817343|ref|YP_002817352.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. CDC 684] gi|228917198|ref|ZP_04080755.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929606|ref|ZP_04092624.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228948284|ref|ZP_04110567.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229124125|ref|ZP_04253317.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus 95/8201] gi|229604488|ref|YP_002868838.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0248] gi|254686948|ref|ZP_05150806.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. CNEVA-9066] gi|254724512|ref|ZP_05186295.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. A1055] gi|254736667|ref|ZP_05194373.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Western North America USA6153] gi|254741705|ref|ZP_05199392.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Kruger B] gi|254754698|ref|ZP_05206733.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Vollum] gi|254757530|ref|ZP_05209557.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus anthracis str. Australia 94] gi|41018317|sp|Q81L31|SYFB_BACAN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|66773911|sp|Q6HCW8|SYFB_BACHK RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|30259287|gb|AAP28492.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. Ames] gi|47505247|gb|AAT33923.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. 'Ames Ancestor'] gi|49181377|gb|AAT56753.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. Sterne] gi|49330245|gb|AAT60891.1| phenylalanine--tRNA ligase, beta subunit (phenylalanyl-tRNA synthetase, beta subunit) [Bacillus thuringiensis serovar konkukian str. 97-27] gi|164712798|gb|EDR18328.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0488] gi|167510475|gb|EDR85874.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0193] gi|167528988|gb|EDR91743.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0442] gi|170126378|gb|EDS95267.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0389] gi|170667781|gb|EDT18534.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0465] gi|172081697|gb|EDT66768.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0174] gi|190561840|gb|EDV15809.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis Tsiankovskii-I] gi|195993049|gb|EDX57008.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus W] gi|218539149|gb|ACK91547.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus AH820] gi|227005729|gb|ACP15472.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. CDC 684] gi|228659427|gb|EEL15075.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus 95/8201] gi|228811271|gb|EEM57609.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228829993|gb|EEM75612.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842399|gb|EEM87490.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229268896|gb|ACQ50533.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus anthracis str. A0248] Length = 806 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|159028409|emb|CAO89851.1| pheT [Microcystis aeruginosa PCC 7806] Length = 811 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 248/832 (29%), Positives = 432/832 (51%), Gaps = 49/832 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ +++WL++ + S +++ + LT G+EVE++ D RE I K++ + +P+ D Sbjct: 1 MRISINWLRELVKIAQSPQELAELLTIAGIEVEEIEDRREWAKGVVIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ +VCGAPN R +L A G+ + + N+ + K+RG++S GM+ Sbjct: 61 KLSVCQVDIGQENLSTIVCGAPNARADILVPVATLGTYLAKINLTIKPAKLRGVKSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ DS I + P+G + L L + I+D+S T NR+D + + G+A + Sbjct: 121 CSLAELGLTKDSEGIHIFSQENLPLGTDVRPLLGLDEVILDISPTANRADALSMIGVARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A G+L + L S ++ ++ ++ C + ++GV+ +P W++QR Sbjct: 181 VAALTGGELSLPKVK--LGEFSSKKDLTLEISENKACPAYIGTVIEGVKIGPSPLWLQQR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-------SDVLTVRRACSGEKILAL 290 L+A GLRSI+ +VDITNYV L+ G P H FD R+ S + VR A G+KI+ L Sbjct: 239 LQAAGLRSINNVVDITNYVLLEWGQPLHAFDRDRLQSFAGGKSVTIGVRFAEEGKKIITL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L N++I ++ + ++AG++GG+ ++ T ++++E AL+DPI I RS K Sbjct: 299 DGQERSLKELNLLITANNKPVALAGVMGGQDTEVNEETVNLVLESALFDPIAIRRSSKAQ 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR--------NITYKPR 402 G+ ++S R+ERGV+ + + + LIL L GGT S A +I + Sbjct: 359 GLRSESSGRYERGVNPAALEYACQRAIDLILELAGGTVSSQVKADYRADQSSGSIELRLE 418 Query: 403 KIVFMNSEVKRLSGI--DVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWR-QDVEEK 456 ++ + +V SG ++ ED RIL LG + + V+VP +R +D+E + Sbjct: 419 RLQQLLGQVTLDSGAIGEILAEDVERILGNLGCELQLTSKNPVLWTVTVPDYRYRDLERE 478 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EE+ R+YG D+ + LP LS +++ R ++ + + E+V +S + Sbjct: 479 IDLIEEVARLYGYDRF-VDTLPAKTAAG--GLSFEETIQRRLREAFRAVGLTELVQYSLV 535 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E + E+ + NP+ + S +RT+LL GL++A N + FE+ V+ Sbjct: 536 KPELA--------EVVLANPLFVEYSALRTNLLDGLIEAFEYNQSQGNGSLNGFEIGRVF 587 Query: 577 ENDTPEGQKYMA-AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 ++ +Y A AGI G +GR W +E + ++AK L + +SL Sbjct: 588 RLESDNINEYDAIAGIFGGD--FFPAGR-WLRSGKEVA--MTWYEAKG-ILEAVFDRLSL 641 Query: 636 DSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ +E A + +HPGR+ + + LG FG+ HP + GL + FE+ + Sbjct: 642 -TVSYEKYAEDARFHPGRTASLWIGKQ-RLGIFGQLHPQLRQQKGLIEAVYAFEIQFPIL 699 Query: 695 PISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDV 752 + K + + S +P RD+AF V IP L IKN L++ V +FD Sbjct: 700 LATLSDSAKITPRLQVYSTYPGAARDIAFFVSTDIPVDRLTKTIKNAGGTLLEKVELFDR 759 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +QG+++ E S+A ++ + T D+++ LM ++ E +VK+ LRS Sbjct: 760 YQGQNVPENHCSLAFSLVYRASDRTLTDEEVEPLMTKVREALVKQFQVSLRS 811 >gi|323351811|ref|ZP_08087465.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] gi|322122297|gb|EFX94023.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis VMC66] Length = 801 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 241/824 (29%), Positives = 435/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFSLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDEIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ + ++ V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDIEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVDRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGVGLTEIITYALTTPEKAIEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEDL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L+ E A + Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLKAEYAASN 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G LG Sbjct: 699 QPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++++K A LR Sbjct: 758 VGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLIEKLGAELR 801 >gi|70726823|ref|YP_253737.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus haemolyticus JCSC1435] gi|91208140|sp|Q4L5E4|SYFB_STAHJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|68447547|dbj|BAE05131.1| Phe-tRNA synthetase beta chain [Staphylococcus haemolyticus JCSC1435] Length = 800 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 236/819 (28%), Positives = 416/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V +E + + +T G+EV+ +D + + + + S E++PD D Sbjct: 1 MLISNEWLKDYVDAGVKVEDLAERITRTGIEVDDMIDYSKDIKNLVVGYIQSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I + G L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNVVPKAYENGIFVFQTEVEPGTDALTALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A ++ + +SES E+ +D+ ++ VK V +P Sbjct: 180 GTAYEVAALYQTEMTKPETQSNETSESATNELSVTIDNPEKVPYYSARVVKNVSIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 W++ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A E + LD Sbjct: 240 WVQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAKDEETMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 N E L ++VI++ ++AG++GG + + TT+V++E A++DP++I + + L Sbjct: 300 NNERKLVDTDIVISNGQEPIALAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ L G D + ++ I + Sbjct: 360 LRSEASSRFEKGIATEFVDEAVDRACYLLQELASGEVLQDRVSSGDLGSFVTPIDITAEK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ ++ I +LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNKTIGFNLSNDEIQSIFRQLGFETTLKGETLTVNVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ L+ +Q +TR +K L + + + +S +SK+ + F +R Sbjct: 480 EIPS-SLPVFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 + +L P+S + +R SLLP L++AT NV R D ++E+ V+ E + P+ + Sbjct: 539 TISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K EE +D F AK V E +L+ +++G Sbjct: 599 YL-SGILTGEYVVNA----WQGKKEE----IDFFIAKGVVDRVAEKL-NLE-FSYKAGKI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I+ + + G+ GE HP + L FE+ D++ + Sbjct: 648 EGLHPGRTAIVSLEGQDI-GFIGELHPQVAADNDLKRTYV-FELNYDAMMQVAVGYINYE 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 ++ V RD+A V+ +P+ L II N + ++ VFDV++G+ L +GKKS Sbjct: 706 QIPKFPG---VTRDIALEVNHDVPSSELKQIIHNNGEDILQSTLVFDVYEGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VAI++ +DT D+ + + D+I+E ++ A +R Sbjct: 763 VAIRLNYLDTEDTLTDERVSKIHDKILE-ALQAQGATIR 800 >gi|229093654|ref|ZP_04224754.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-42] gi|228689741|gb|EEL43548.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-42] Length = 806 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTAAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGTDAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDPERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|113475716|ref|YP_721777.1| phenylalanyl-tRNA synthetase subunit beta [Trichodesmium erythraeum IMS101] gi|110166764|gb|ABG51304.1| phenylalanyl-tRNA synthetase beta subunit [Trichodesmium erythraeum IMS101] Length = 817 Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 238/845 (28%), Positives = 435/845 (51%), Gaps = 69/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ +D +++ E++ +TLT G EVE++++R S ++ K+L +++P+ + Sbjct: 1 MRISLKWLEELVDINITPEELAETLTMAGFEVEEIEDRSTWSAGVVLGKILEADKHPNAN 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK + +VCGA N + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLKVCQVDIGKSDPLNIVCGASNATADIYVPVATIGTYLPAIDLKIKKSKLRGVHSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ DS I ++ P +G + L L D I+D++ T NR+D + + G+A + Sbjct: 121 CSLSELGLTKDSEGIHIFDLENPELGSDVGPLLGLDDVILDLTTTANRADALSMIGVARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + A L+ ++S L IP E IK D+ SS C + ++GV+ +P Sbjct: 181 VAALTGASLRIPDVSEIL----IPDEEGDSSIKIDISASSACPIYIGTVIEGVKIGPSPK 236 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT-------VRRACSGE 285 W+++RL+A G+R+I+ +VDITNY+ L+ G P H FD +I ++ VR A E Sbjct: 237 WLKERLEATGIRAINNVVDITNYILLEWGQPLHGFDQDKIQQIIGHKLLTIGVRYANENE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +++ LD+Q+ L + ++I ++ + ++AG++GG+ D TT++L+E A++ PI I R Sbjct: 297 ELITLDSQKRTLETETLLITANEKPVALAGVMGGEETEVSDQTTNLLLEAAIFAPIAIRR 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD----ICIARNITYKP 401 S ++ G+ T++ RFERGV+ ++ + LI L GG S A +IT Sbjct: 357 SARSQGLRTEASTRFERGVNTAELVLACSRAIHLITELAGGKVSYQDTFTTKADSIT-AT 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLR-----------ILERLGFSVIGEYDK----FEVSV 446 RK+ + + G P E++L IL+ LG + K + V+V Sbjct: 416 RKLSLSLERINAILGPLKPSENTLDESFLQPEAVEGILKSLGCELSKIEAKGAVGWNVTV 475 Query: 447 PSWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P++R +D+E + DL+EE+ R+YG D E LP L + R ++ L Sbjct: 476 PAYRYRDLEREIDLIEEVARLYGYDNF-CETLPSKSAAGY--LPPGELAVRSIRAALRGA 532 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + E++++S + + GG+ ++ I NP+ + S +RT LL GL+ A N+++ Sbjct: 533 GLTELMHYSLVKQ-------GGENQIAIANPLFVEYSALRTELLTGLIDAFQYNLEKGNG 585 Query: 566 DFAIFEVSHVYENDTPEGQKYMA-AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FEV ++ N+ + Q+ A AG+ I + W+ +E+ + F+AK Sbjct: 586 ALNGFEVGRIFWNEVEKYQEAEAIAGV------ISNGSKSWTRGGQEQP--LSWFEAKG- 636 Query: 625 ALSVIEPFVSLDSLRFESGA---PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 ++E L+ E A S HPGR+ + + LG FG+ HP + L Sbjct: 637 ---ILEQVFERLYLKVEYKAYSENSLLHPGRTASLWLQGK-YLGIFGQLHPQVRQERELP 692 Query: 682 NPICGFEVYLDS-IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KN 739 + + F++ L + + + +K S+ P RD+AF V + + +I + Sbjct: 693 DEVYVFQLDLGVLVSVMTQGNIWKRKFSSYSTFPPAARDIAFFVTVGVSVDDIKQVISRA 752 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L++ + +FD +QG+++ +G++S+A +++ + T D D+ L ++ + +V K Sbjct: 753 AGKLLESIELFDEYQGENVPDGERSLAFRLIYRVGDRTLTDADVDPLQQKVRDALVDKFK 812 Query: 800 AVLRS 804 LRS Sbjct: 813 VNLRS 817 >gi|206900235|ref|YP_002251022.1| phenylalanyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] gi|206739338|gb|ACI18396.1| phenylalanyl-tRNA synthetase, beta subunit [Dictyoglomus thermophilum H-6-12] Length = 799 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 246/814 (30%), Positives = 402/814 (49%), Gaps = 51/814 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGL--EVEKVDNREALSPFTIVKVLSVERNPDL 58 M + WL D+L+ ++ ++++ + L ++GL ++K I ++ S+E++P Sbjct: 1 MLVSYRWLMDYLEEEIPVKEVINALRNLGLYGTIQKSIGAN-WDKIIIGEIKSIEKHPHS 59 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + I ++D G+ + + +V GA NV VG A PG I ++ +R+ GI+S GM Sbjct: 60 ENLLICKVDVGE-KLLNIVTGAKNVFVGAKVPVALPGVEIL--GEVIGIREFNGIKSEGM 116 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CSE EL S+D IM LP D +G Y D +IDV + NR DC+ GIA + Sbjct: 117 LCSEYELEFSEDKEGIMILPEDFKIGSTFDTYFGKGDFLIDVEVPSNRGDCLSYLGIARE 176 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLD----------DSSLCKGFAMCCVKGVRN 227 + PL E + K D+ D LC F + +K V+ Sbjct: 177 ISGY---------FGVPLKFEFKKAQEKDDISIKDFASCEVLDFDLCPRFTLRFIKDVKI 227 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W+R RL+ VGLRSI+ +VDITN++ L+ G P H +D + L VRRA GEK Sbjct: 228 GPSPLWLRWRLERVGLRSINNVVDITNFIMLETGQPLHAYDFDLLKGGKLIVRRAKEGEK 287 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I+ ++ +E L D +VIA R I GI+GGK +DNT +VL+E A + P+NI RS Sbjct: 288 IVLINGEEKILDNDILVIADAERAVGIGGIMGGKDTEINDNTKNVLLEAAYFSPVNIRRS 347 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + LGI TD+ RFER VD+ +L + +I + GG + I N VF Sbjct: 348 ARKLGIRTDASLRFERNVDIHRTADILDYAAEMIRLVAGGDIAKDKIDINKGLPSLTKVF 407 Query: 407 MNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + E V ++ G ++ ++ +RIL ++GF + E+ VPS+RQD++E+ DL+EE+ R Sbjct: 408 LRPERVNKILGTNLKEDEIVRILSKIGFDIKSRNPVLEIEVPSYRQDIKEEIDLIEEVAR 467 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG + I S PL + D ++ R ++ L S + E +N+SF+S + G Sbjct: 468 FYGYNNIPSVPLQKGHIVDPP--LTEEIIERRIRETLPSLGLYEAINYSFMSVKDLEKAG 525 Query: 526 GGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 E ++I NP+S + S +RTSLLP LL N +R D ++E+ V+ Sbjct: 526 ILNTEPFNLFIQISNPLSEENSVLRTSLLPSLLNVAQVNSNRQQKDVFVYEIGKVFYKGK 585 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSD--KSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 E I + GI +G + D R VD +D K ++ E + + Sbjct: 586 DE-------YIEEKHLGILMTGEAYKDPWSVPYEIRKVDFYDLKGIVETIFER-IWKEEP 637 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F+ + HP + I EIV G+ GE +P I + + E+ LD + Sbjct: 638 TFKKSNFEFMHPSKQSYIAFRDEIV-GFMGEVNPWITQNLDIRERVYFAEINLDKLNFES 696 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 K K L ++RDLA I+ + +P + +I++ L+ + +FD++QG+ Sbjct: 697 PK----PKYKPLPIYPGIRRDLALIIPEDMPVENVEKDILETSGELLKWLRIFDLYQGEK 752 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + +G KS+ + T D ++ ++++++ Sbjct: 753 IEKGYKSITFSLFFLAEDHTLEDKEVDEIINKVL 786 >gi|283458448|ref|YP_003363073.1| phenylalanyl-tRNA synthetase subunit beta [Rothia mucilaginosa DY-18] gi|283134488|dbj|BAI65253.1| phenylalanyl-tRNA synthetase beta subunit [Rothia mucilaginosa DY-18] Length = 856 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 250/833 (30%), Positives = 402/833 (48%), Gaps = 76/833 (9%) Query: 1 MKFTLSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + D S E + TL +GLE E V + E P + +VLS+E Sbjct: 1 MRVPLSWLREFVPVAEDASAEDLMATLVKVGLEEEDVHRPSDELSGPIVVGQVLSMEPET 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N + G V PG+ +P Sbjct: 61 HSNGKTVNWCQVRVVPEGQEQTLTGKGIEPSGVQGIICGAHNFKPGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 + RK G +S GM+ S +EL + DD I+ L +D VG + L L D Sbjct: 120 GGFAITARKTYGHKSAGMIASTRELGIGDDHGGILVLSTLGLDPEVGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS----CPLSSES-IPLEIKFD--LD 209 +V++TP+R +RGIA + A ++ ++ P ++ES P+ ++ D + Sbjct: 180 AEVNVTPDRGYAFSLRGIAREWCHATGSSFEDFVLAYGERAPEANESGHPVSLRDDAPIH 239 Query: 210 DSSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 + C F M V GV+ + P WM RL+ G+RS+S VDI+NYV L+ G P H +D Sbjct: 240 GNPACTRFVMREVSGVKADAPVPTWMSSRLRLAGVRSLSLPVDISNYVMLETGQPLHFYD 299 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A ++ + VRRA +GEK++ LD E L P+++VIA D + +AG++GG D+T Sbjct: 300 ADKVQGEIVVRRAAAGEKLVTLDGVERTLHPEDIVIADDSGVIGLAGVMGGASTEVTDST 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T +LVE A +D +++AR+ + +I++S RFERGVD Q + V L++ L G Sbjct: 360 TRILVESARFDEVSVARTARRHKLISESSKRFERGVDPQIQAAAAQRAVELLVELAGAQV 419 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPS 448 ++ Y+P I G+D E L +G V + V+VPS Sbjct: 420 EPGVTDVSLGYEPVVIDLPADYTAGRIGVDYSPEQIESCLREIGCLVERTESGYAVTVPS 479 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 WR D+ K DL EEI RI G + I S LP+ R + +Q+ R LA+ + Sbjct: 480 WRTDLRAKEDLTEEIARIDGYENIPST-LPVAPA--GRGYTPEQAGKRRALNALAASGLT 536 Query: 509 EVVNWSFISKEQSVLFGGGQ-----------RELEILNPISADMSNMRTSLLPGLLKATG 557 EV + F+S + + L+ + + NPIS MR SLLPGL++ Sbjct: 537 EVFAYPFVSADANNLWSAPWVSTPENPVTEVPSVRLENPISLAEGWMRRSLLPGLVEVLK 596 Query: 558 RNVDRAIADFAIFEVSHVY--------ENDTPEGQKY-------MAAGIRKGSSGIEGSG 602 RN+ R + AIFE HV+ E+ P G + + AGI + I G Sbjct: 597 RNLSRGFKNLAIFEAGHVFIPGEQLGSESIPPLGARPSDEVLADLNAGIPQQPMFIAG-- 654 Query: 603 RLWSDKSEE-----RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 L++ E R D DA DA+ ++ VS + ++F +G + +HPGR + Sbjct: 655 -LFAGTEHEVMPGATPRAYDWRDA-LDAVRLVADAVSAE-VQFRNGVHTAFHPGRVAEVL 711 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +A +G+ GE HP +L L C FE+ ++ R + ++ + + Sbjct: 712 NAAGERVGFAGELHPKLLQELNLPERTCAFELDFSAL---FAGRVEARQATPVLTFPAAT 768 Query: 718 RDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 +D+A +VD+ +PA + +++ L++D+ VFD ++G + E KKS+A + Sbjct: 769 QDVALLVDRDLPASEVERVLREGAGELLEDIRVFDDYRGVGIDESKKSLAFAL 821 >gi|319902395|ref|YP_004162123.1| phenylalanyl-tRNA synthetase beta subunit [Bacteroides helcogenes P 36-108] gi|319417426|gb|ADV44537.1| phenylalanyl-tRNA synthetase beta subunit [Bacteroides helcogenes P 36-108] Length = 820 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 250/836 (29%), Positives = 424/836 (50%), Gaps = 49/836 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPETAVPGMLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK ++++ C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQTSLKKPAVDAFAVENHDLDIKVTVENNEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTETTRDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT + D+C A K + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAALMVKELAGGTVASEIKDVCAA---PVKNFR 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLR-ILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 + +V+ L G ++P ED+++ I+ L ++ E + + VP +R DV+ D++E Sbjct: 418 VELSYQKVRSLIGKEIP-EDTIKSIVTSLEMKIVDETAEGLTLDVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPNTLKSSLTIKGDCDRSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + ++NP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPPKNLVMLMNPLSADLNAMRQTLLFGGLESISHNANRKNADLKFFEFGNCY 593 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 EN PE K +AA + + +G+ S+ +++ KA ++ Sbjct: 594 HFSAENKNPE--KVLAAYSEEYHLSLWVTGKRVSNSWAHPDENSSVYELKAYVENIFARL 651 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + L + Y S ++T L FG +L F + N EVY Sbjct: 652 GLCMHDLVVGNLTDDIYATALS--VQTRGGKRLATFGVVTKKLLKAFDVDN-----EVYY 704 Query: 692 DSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 + + K K+ KV + +S VKRDLA ++D+ + + I + +L+ +V Sbjct: 705 ADLNWKELMKAIKSVKVSYSEISKFPAVKRDLALLLDKKVQFSEIEKIAYETEKKLLKEV 764 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++FDV++GK+L GKKS A+ L+Q T D I +M ++V N+ K NA LR Sbjct: 765 SLFDVYEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKIMSKLVANLENKLNAKLR 820 >gi|228910383|ref|ZP_04074198.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis IBL 200] gi|228849149|gb|EEM93988.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis IBL 200] Length = 806 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 236/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFANLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFG 525 D I P+ L + + L+ Q++ R V+R L + E + +S S + Q ++ Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMIEP 536 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 + + + P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVGLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L I + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKIFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|73662965|ref|YP_301746.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|91208141|sp|Q49WQ6|SYFB_STAS1 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|72495480|dbj|BAE18801.1| putative phenylalanyl-tRNA synthetase beta subunit [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 800 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 234/820 (28%), Positives = 418/820 (50%), Gaps = 37/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL+ +++ + + + + +T G+EV+ + D + + + V S+ +PD D Sbjct: 1 MFISKEWLESYVEINEQVNVLAERITRTGIEVDDIIDYTKEIKNLVVGYVQSIAAHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEAEPVQIVCGAPNVDAGQTVIVASVGGRLP-GGVKIKRAKLRGEHSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ + + I + G D L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEVGVPSNLVPKQFEDGIFVFSTEVKPGTDALDALYLNDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A + A + + +S+ EI ++ + ++ VK V +P Sbjct: 180 GTAYETAALYNVPMTKPETQSTETSDQTNDEISVNIQNEDKVPYYSARVVKNVTIAPSPE 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV ++ G P H+FD +I S + VR+A + E++ LD Sbjct: 240 WMQMRLIKAGIRPINNVVDISNYVLIEYGQPLHMFDQDQIGSKHIEVRQAKADEEMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 NQE L +++VI + +IAG++GG + + T V++E A++DP++I + + L Sbjct: 300 NQERQLKENDIVITNGETPIAIAGVMGGDFSEVTEATKHVVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ + GG+ + +++ + I S+ Sbjct: 360 LRSEASSRFEKGIATEFVDEAVDRACYLLQTYAGGSVAQGRVSQGELGCFVTPIDISVSK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G ++ ED I +LGF D V VPS R+D+ K DL+EEI RIYG D Sbjct: 420 VNQTIGFELSAEDIESIFVQLGFETTKNKDVLTVMVPSRRKDISIKEDLIEEIARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I S LP+ L+ +QS++R +K L + + +N+S + K+++ F +RE Sbjct: 480 KIPS-TLPVFDQVTHGALTDRQSKSRIIKATLEGAGLNQAINYSLVDKDRAKDFALQERE 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S S +R SL+P L+ A NV R +D ++E+ V+ E++ P+ + Sbjct: 539 TIDLLMPMSEAHSTLRQSLIPHLIDAVAYNVARKNSDVRLYELGSVFFANGEDELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGA 644 Y+ +GI G + W K E +D F AK + E LD +E+G Sbjct: 599 YL-SGILTGDYTVNH----WQSKKET----IDFFVAKGIVDRIAE---KLDIQFEYEAGE 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPGR+ ++ + EIV G+ GE HP + L FE+ D + Sbjct: 647 INGLHPGRTAYVELNGEIV-GFVGELHPKTEKDYDLKRTYV-FELNFDKLMSVSVGYINY 704 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKK 763 + + V RD+A +V++ P+ LVNII ++ ++ + VFDV++G+ + E +K Sbjct: 705 QAIPRFPG---VSRDIALVVNRATPSAKLVNIIHEHGGNILQEAEVFDVYEGEHMAEDEK 761 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI++ + T DD + + + I+E +K A +R Sbjct: 762 SIAIRLAYLDTEQTLTDDKVNAVHEAILE-ALKSEGATIR 800 >gi|197122313|ref|YP_002134264.1| phenylalanyl-tRNA synthetase subunit beta [Anaeromyxobacter sp. K] gi|196172162|gb|ACG73135.1| phenylalanyl-tRNA synthetase, beta subunit [Anaeromyxobacter sp. K] Length = 800 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 252/821 (30%), Positives = 416/821 (50%), Gaps = 38/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ +L WL +++D E++ LT++G E+E V+ A L ++ + + +P+ + Sbjct: 1 MRISLKWLSEYVDLPAP-EELARRLTAVGFEIEAVERTGAGLKGVVAARIAASDPHPNAE 59 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + +QVVCGA N +VG + A G+ +P I K+RG+ES GM+ Sbjct: 60 KLSVTRVDAGGGEPLQVVCGAKNYQVGDVVPLATVGAELPGGTKISKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL LS D+ ++ LP G + + L L D + +V++TPNR D + GIA + Sbjct: 119 CSARELGLSADATGLLILPPGTVPGTPVGEALGLDDVLFEVNVTPNRPDALSHVGIARE- 177 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 VAA LG+ ++ + P E + +K ++ C +A V+GV+ +P W+ Sbjct: 178 VAALLGQ--KVRLPRPGLVEGGGAAGDAVKVRIEAPEKCARYAARVVEGVKIGPSPTWLA 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 QRL+ G+RSIS +VD TNYV L+ G+P H FD R++ + VR A GE+I LD ++ Sbjct: 236 QRLERCGIRSISNVVDATNYVLLELGHPLHAFDLDRVAGHEIVVRTARPGERITTLDGKD 295 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L PD+++IA R ++AG++GG + TT VL+E A + P + R+ + G+ + Sbjct: 296 RALEPDDLLIADRDRGSALAGVMGGGDSEISGGTTRVLLESAWFAPSGVRRTSRRHGLKS 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKR 413 ++ YRFERG D +IP L +LI L GGT + + A+ ++ + Sbjct: 356 EASYRFERGADPGMVIPALDRCAALIAGLSGGTVRAGVVDAKAREVASPEVRMRWDRPAQ 415 Query: 414 LSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+ V ED+ RIL LGF + D VPSWR DV + DLVEEI+R G D I Sbjct: 416 VLGMPVSREDARRILLSLGFEERASDGDAVSFGVPSWRVDVLIEEDLVEEIVRTLGYDAI 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRE 530 E LP V + Q+ R + L + E VN+SF++ + + G Sbjct: 476 P-ETLPGPAVRTPAESAEAQAVGR-ARAALEAAGFSEAVNFSFVAARDLEPLAGGLAAGG 533 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG------- 583 + + NPISAD++ MRTSL+P LL+ N + + D ++E++ Y Sbjct: 534 IALRNPISADLAVMRTSLVPSLLRNAAHNRRQRVEDVRLYEIARAYGPRAAGAAGDAPGH 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + AG+ G G W+ + D DAKA ++E S + + Sbjct: 594 EATEVAGVLLGRRSPVG----WAVGGD----VADFHDAKAAVQGLLEALGVEAS--WSAP 643 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 P W HP S ++ LG GE HP + + F L + F + LD++ + + + Sbjct: 644 GPGWLHPRTSAALRAPGGAALGELGELHPRVAEAFELPRGVLAFRLSLDALLAAARLIPQ 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 + + L + V RD+A +V+ + A + +++ + L++ V +FDV++G L G+K Sbjct: 704 YRPIPRLPA---VLRDVAVVVEDAVTAAAVEALVRE-EPLVEAVILFDVYKGAPLPAGRK 759 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++A+ + + T D + RIV + ++ A LR Sbjct: 760 NLALAITYRAPDRTLTDAEADAAHARIVARLRERVGAELRG 800 >gi|224476246|ref|YP_002633852.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus carnosus subsp. carnosus TM300] gi|222420853|emb|CAL27667.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus carnosus subsp. carnosus TM300] Length = 801 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 239/820 (29%), Positives = 414/820 (50%), Gaps = 36/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL+ + + + + + +T G+EV+ + D + + + S ++P+ D Sbjct: 1 MLISKEWLESLVAVNEPVNDLAERITRTGIEVDDIIDYSAEIKKLVVGYIESKTQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICKVDIGEEEPVQIVCGAPNVDAGQYVIVATVGGRLP-GGIRIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ LS + I P + G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGLSSNVVPKAFEEGIYNFPTEVKPGTNALEALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A + A L S S E+ +D+ ++ VK V+ +P Sbjct: 180 GTAYETSALYGAPLTLPETQPDTISTSAGEELSVKVDNPEKVPYYSARVVKNVKIAPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A +GEK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAEAGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI++ ++ G++GG + D T +V+VE A++DP++I + + L Sbjct: 300 DTERELKASDIVISNGKEPIALGGVMGGDFSEVTDQTQNVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ G + A ++ I + Sbjct: 360 LRSEASSRFEKGIATEFVDQAVDRACYLLEHYASGEVLENRVAAGDLGEFITPIQITVDK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + G ++ +ED ++ E+LGF+ V VPS R+D++ K DL+EE+ RIYG D Sbjct: 420 INGTIGSEMSVEDIVKSFEQLGFNTENNDGNLTVQVPSRRKDIKIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + +L+ +QS+TR VK + + E + +S ISK+++ F R Sbjct: 480 EIPS-TLPVFEDVTSGHLTDRQSKTRIVKNTIEGAGLSEAITYSLISKDRAKEFSVSDRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S + +R SLLP L+ A NV R + ++E+ V+ E + P+ + Sbjct: 539 NIELLMPMSEAHAVLRQSLLPHLIDAAAYNVARKNDNVFLYEIGRVFFANGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGA 644 Y+ +GI G E SG W K E VD + AK ++ E LD + +E+ Sbjct: 599 YL-SGIMTG----EYSGNAWQGKKEN----VDFYLAKGIIDAIAE---KLDITFEYEAAK 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ + + + V+G+ GE HP + + L FE+ D I Sbjct: 647 MDGLHPGRTANVLLNGD-VIGFIGELHPQLAEQNDLRQRTYVFELNYDKIMNVSVGYINY 705 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 + + V RD+A VD+ + A L++ IK + ++ D VFDV++G+ + GKK Sbjct: 706 EAIPKYPG---VTRDIALEVDKDMTAAELIHTIKAHGHDILQDAQVFDVYEGEHMEAGKK 762 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SVAI++ ++T D+ + + D IVE + + AV+R Sbjct: 763 SVAIRIAYLDRENTLTDERVTAVHDEIVEALTAQ-GAVIR 801 >gi|94676960|ref|YP_588905.1| phenylalanyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94220110|gb|ABF14269.1| phenylalanyl-tRNA synthetase, beta subunit [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 794 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 238/824 (28%), Positives = 413/824 (50%), Gaps = 61/824 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + +T GLEV +D + + +++ + +P+ + Sbjct: 1 MKFSELWLREWVNPTIDSNALAEQMTMFGLEVNSIDAVANNYADVVVGQIVECDYHPNNE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I++++ K I + C + R L + V++ + G + Sbjct: 61 QLLIVKVNINKSNLININCNDVSCRKTL--------------KVAVHIVESDDKLLQGKL 106 Query: 119 CSEKELMLSD--DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL + D + I+ELPIDAP+G LS+YL+L D I D S+TPNR+DC+G+ GIA Sbjct: 107 CSFAELGIRDYYHNIGIIELPIDAPIGDNLSNYLKLYDKIFDFSVTPNRADCLGIVGIAR 166 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ LK PL +P+ + DS C + +K + + + P W Sbjct: 167 EIAIINKLPLKRFFTQSVAPLIINILPINVI----DSIACPRYIGRVIKNINSRMNTPLW 222 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 ++++L+ G+ ++ ++DITNY+ L+ G P +VFD ++I+ L +RRA EKI L+ Sbjct: 223 IKEKLRRSGISLVNVVIDITNYILLEFGQPINVFDLNKINGGLIIRRAKPKEKITLLNGY 282 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ + +V+A ++ SIAGIIGG + ++ + +E A ++P+ I + G+ Sbjct: 283 KATLTSETLVVADHSKVLSIAGIIGGIDSSFTCASSHIFLEAAFFNPLVIRGQARKYGVN 342 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIVFMNSEV 411 T++ R+ERG+D + V++ SLIL +CGG + N KP I+ ++ Sbjct: 343 TEASLRYERGIDPMLTLHVIERATSLILDICGGQPGPVINVTNTAALPKPATIILRRKKL 402 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G +P ++ + IL R+G + +++ P WR D+E + +++EEI RIYG D+ Sbjct: 403 DSLIGYIIPDQEIIDILSRIGCKITNITHGWQILTPHWRFDIETEENIIEEITRIYGYDK 462 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYV------KRVLASRAMMEVVNWSFISKEQSVLFG 525 I P+ + NL +QQS + K +L R E + +SF+ + L Sbjct: 463 IPHVPI-------RSNLLIQQSHKETILPLERAKYLLVDRGYYEAITYSFVDPKIQKLLY 515 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG 583 G L + NP+S +MS MR S+LPGL+ A N +R + +FE + + EG Sbjct: 516 PGHVMLHLRNPLSLEMSAMRLSMLPGLICAVIYNNNRQQKNIRLFESGSCFIPSKNVDEG 575 Query: 584 --QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q + +G++ G E WS K ++ D +D K D +++E LD F+ Sbjct: 576 IRQNLLLSGVKTGCRFDEH----WSTKHQQ----ADFYDIKGDIEAILELTGKLDQFEFK 627 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + S HPG+ I ++E V G+ G HP + + LS I FE+ I + Sbjct: 628 AQEQSVLHPGQCAAINLNSETV-GWVGMIHPELEEKLNLSYSIFVFELLWSKI-----NQ 681 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 K K LS RD+A +V +HI A + K++ +LI V +FDV++G + Sbjct: 682 RKIPKATFLSPFPTTYRDIAIVVKEHIRAADVTTECKHILKTKLI-SVNIFDVYKGIGIP 740 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A+++++Q T ++ I ++ +E + K+ A LR Sbjct: 741 PGFKSLAMRLILQSDNSTLEEEKISTIISECIELLKKRFQASLR 784 >gi|291513974|emb|CBK63184.1| phenylalanyl-tRNA synthetase beta subunit [Alistipes shahii WAL 8301] Length = 821 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 258/844 (30%), Positives = 416/844 (49%), Gaps = 63/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 M + +WLK ++ TD+ EKI + LT IGLEVE + E L + +V++ +P Sbjct: 1 MNISYNWLKRYIATDLPAEKIAEILTDIGLEVEGFEKIETVKGGLRGVVVGEVVTCADHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI----PENNMIVNVRKIRG 111 D D + +D G + +Q+VCGA N R GL + A G+ + + + KIRG Sbjct: 61 DSDHLHVTAVDVGAAEPLQIVCGAANCRAGLKVLCATVGAVLYPDGGDEEFKIKRSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDCIG 170 +ES GM+C+E+EL + IMELP DAPVG +YL + D +I++ LTPNR D Sbjct: 121 VESLGMLCAEEELGIGSSHDGIMELPADAPVGMEAREYLHVEDDYLIEIGLTPNRVDAAS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIP----LEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + + + P S P LE+ +++ +A V G + Sbjct: 181 HIGVARDLAAYLKSRGENAEVKLPDVSAFAPDNHDLEVAVRVENPEAAPRYAGVTVTGCK 240 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GE 285 +P WM+ L+A G+ + LVDITN+V + G P H FDA++I V R C+ G Sbjct: 241 IGPSPEWMQNCLRAAGINPKNNLVDITNFVLFELGQPLHAFDAAKIEGREVVVRTCAEGT 300 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD E L+ +++I S R IAG+ GG +G D TTDV +E A ++P+ + + Sbjct: 301 PFVTLDGVERKLTDKDLMICSAERPMCIAGVFGGLDSGVSDTTTDVFIESAYFNPVWVRK 360 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKI 404 + K G+ TDS +RFERG+D + K L+ L GGT I+ IT P I Sbjct: 361 TAKRFGLNTDSSFRFERGIDPNMQVYAAKRAALLMKELAGGT-----ISSGITDIYPEPI 415 Query: 405 ---VFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKAD 458 VF S V L G ++P I+ L ++ E D V+VP +R DV+ +AD Sbjct: 416 GDFVFDISLARVNALIGKEIPETVVRTIIAALEVKILAEKDGVLTVAVPPYRVDVQREAD 475 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSF 515 LVE+ILRIYG + ++ +P TQV + + + R R + L + E+++ S Sbjct: 476 LVEDILRIYGYNNVE---IP-TQVRSTLSYAPKPDRNRLMNLAADFLTANGFTEIMSNSL 531 Query: 516 ISKEQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 ++ + G +R + ILNP+SAD++ MR +LL +L+A G N +R D ++ Sbjct: 532 T---KAAYYEGLTSCPAERCVRILNPLSADLNVMRQTLLFNMLEAVGLNANRRNGDLCLY 588 Query: 571 EVSHVYENDTPE--GQKYMAAGIRKGSSGIEGSG----RLWSDKSEERCRFVDLFDAKAD 624 E + Y D + + +AA + I +G + W+ K + F +A Sbjct: 589 EFGNCYFYDESKRTDENRLAAYSEEYRLAIAVTGVSTPQSWNAKPVK----ASFFTLRAV 644 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 A ++ F V + +L+ E+ + G + + + +G D + Sbjct: 645 AEKLLRRFGVDIYALKAETLESDLFSEGLTLSLNGKQLLQIGSVAAAIRRRTD---VKQD 701 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + E+ +++ K TK K+ LS V+RDLA +VD+ + +L + + Sbjct: 702 VYYLEMNFEAL----AKSTKKLKIAAGELSKFPEVRRDLALLVDKSVTFSSLRDAAFAAE 757 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 R L+ V++FDV++G L EGKKS A+ +++ T + I +M + +K A Sbjct: 758 RKLLKSVSLFDVYEGDKLPEGKKSYALSFILEDKTRTLDERTIERVMANLTRQFEQKCGA 817 Query: 801 VLRS 804 +R+ Sbjct: 818 QVRA 821 >gi|239636365|ref|ZP_04677367.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus warneri L37603] gi|239597720|gb|EEQ80215.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus warneri L37603] Length = 800 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 245/836 (29%), Positives = 417/836 (49%), Gaps = 69/836 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D + +++ + + +T G+EV+ VD + + + ++S +PD D Sbjct: 1 MLISNEWLKDYVDVEQNVQDLAERITRTGIEVDDLVDLTKDIKNLVVGHIISKASHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEAPVQIVCGAPNVDEGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G D L L+D I++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNVVPKAFENGIFVFPEAMTPGTNALDALYLNDQIMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + + S E++ + +S ++ VK V +P Sbjct: 180 GTAYEVAALYDTKMTKPETNSNEETNSAMDELQVTVKNSDKVPYYSARIVKNVTIAPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S+ + VR+A E + LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVLLEYGQPLHMFDQDQIGSNHIEVRQAHQNETMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +QE L ++VI + ++ G++GG + D TT+V++E A++D +I + + L Sbjct: 300 DQERTLLESDIVITNGQSPIALGGVMGGDFSEVSDETTNVVIEGAIFDSASIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + +++ RFE+G+ + + + L+ + G D ++ I + Sbjct: 360 LRSEASSRFEKGIATEFVNEAVDRACYLLETNASGRVLKDRVAEGDLGAFITPIQITTDK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G ++ E+ I E+LGF + D+ V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFNLSTEEIKNIFEQLGFETETQQDELTVYVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + L+ +Q +TR VK + + + + +S +SK + F R Sbjct: 480 EIPS-TLPVFEDVTNGALTDRQHKTRTVKETIEGAGLNQAITYSLVSKSHAKDFALQDRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L++A NV R D ++E+ V+ E P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIEAAAYNVARKNQDVKLYEIGRVFFGNGEGQLPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK VI+ +L FE A Sbjct: 599 YL-SGIMTGEYVV----NQWQGKKEA----VDFYLAKG----VIDRVAQKLNLNFEYRAT 645 Query: 646 S--WYHPGRSGIIKTSAEIVLGYFGEFHPNI-------------LDFFGLSNPICGFEVY 690 HPGR+ ++ + + + G+ GE HP + L++ + N G Y Sbjct: 646 EIDGLHPGRTAMVSLNGKDI-GFIGELHPTVANDNDLKRTYVFELNYEEMMNVSVG---Y 701 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDV 747 ++ PI + +P V RD+A V+ +PA L N I + D ++ D Sbjct: 702 INYQPIPK---------------YPGVSRDIALEVEHDVPASELTNTIHQRGAD-ILQDT 745 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VFDV++G+ L EGKKSVAI++ ++T D+ + + D+I+E +K A +R Sbjct: 746 LVFDVYEGEHLDEGKKSVAIRLYYLDTENTLTDERVTKVHDQIIE-ALKAKGATIR 800 >gi|219683724|ref|YP_002470107.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium animalis subsp. lactis AD011] gi|219621374|gb|ACL29531.1| phenylalanyl-tRNA synthetase, beta subunit [Bifidobacterium animalis subsp. lactis AD011] Length = 866 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 259/872 (29%), Positives = 398/872 (45%), Gaps = 98/872 (11%) Query: 5 LSWLKDHL--DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ + + E++ L +GLE E++ P + V+ P + + Sbjct: 4 MGWLREHVAVPENETYEELARDLVRVGLEEEEIHTSNVTGPIVVGYVVDATPEPQKNGKV 63 Query: 63 L---RIDTGK-HQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G+ + ++ ++CGAPN++ G V PG+ +P N + RK Sbjct: 64 INWCHVDVGEEYNDVDEHGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GNFKIEPRKT 122 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L +PI++++ Sbjct: 123 YGHISDGMCASERELGLGDSHDGIILLRDYGFTPEEYEALQPGDDAMHLLHLDEPILEIN 182 Query: 161 LTPNRSDCIGVRGIA-----------LDLVAAGLGKLKEINISCPLSSESIPLEIKFD-L 208 +TP+R RGIA D VAA + ++ + + + + + Sbjct: 183 VTPDRGYAFSYRGIAREFHNSTGAEFTDPVAAFEERAPQLEDQNGQTHDIDVIIDDDNPI 242 Query: 209 DDSSLCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 C F + V + + PNWMR RL G+RS+S VD+TNYV LD G P H + Sbjct: 243 HGVVGCDRFYVRAVHDYKPGSPTPNWMRHRLSRAGMRSLSLPVDVTNYVMLDLGQPMHAY 302 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGKH 321 D +IS + VRRA +GE ++ LD +++DL P++++I RI IAG++GG++ Sbjct: 303 DLDKISGPIVVRRAKAGETLVTLDGKKHDLDPEDLLITDSPNGEQGSRILGIAGVMGGEY 362 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 D TT++L+E A +DPI +ARS + I +++ RFERGVD Q + V L+ Sbjct: 363 GEVTDETTNILLEAAHFDPITVARSARRHKIPSEASRRFERGVDTQIQPAAAQMAVDLLT 422 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD- 440 ASD N + I F EVKRL+ +D+ I IL +G SV G + Sbjct: 423 KYGDAKASDTPRDVNNVKRGHPIAFKAGEVKRLTSLDLDINKISDILTDIGCSVAGGGNG 482 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 +F V+ PSWR D+ DLVEE+ RIYG D+I +P VE L+ Q R V Sbjct: 483 EFSVTAPSWRPDLTAACDLVEEVARIYGYDRIPVR-VPHAPVEGHVGLTDDQLHKRQVAD 541 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKA 555 LA ++EV+++ F+ K F E +EI+NP++ D +R +L L Sbjct: 542 ELAEYGLVEVLSYPFVGKADFKNFQIDSEEVEKVSVEIVNPLAGDRPFLRRQVLLTLATT 601 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEG--------------------------QKYMAA 589 RN+ R + + +E+ HVY D PE Q A Sbjct: 602 VQRNLHRGLENICCYELGHVYLAD-PEAPAVPALPGAQRPSDDQLSALDAGLPEQPLHVA 660 Query: 590 GIRKGSS---GIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 I G++ G G R W+D E R D AK + LD + Sbjct: 661 AILTGNAEDDGWLGDKRPVDWTDAVEAVHRIADRLGAK----------IVLDQSDGDKAG 710 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 W HPGR I S + +G GE HP + D G FE+ L ++ + + Sbjct: 711 AQW-HPGRVARI-MSGDTPVGVVGELHPKVDDALGFPRHSAAFEIDLTALFSTLSNKPVQ 768 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L I+ +++ + +FDV+ G +G+GKK Sbjct: 769 AKPI--STFPPVKQDLAFTVPTSVTAHELTETIRQAAGDVLESIELFDVYTGDQVGDGKK 826 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 S+A V + T D + RIVE Sbjct: 827 SLAYAVTFRAPDRTLTSQDSEEIRQRIVEKTA 858 >gi|229032205|ref|ZP_04188178.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1271] gi|228728985|gb|EEL79988.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH1271] Length = 806 Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 237/826 (28%), Positives = 416/826 (50%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL +++ + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVAKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A + VAA G KL IN+ S + + + + + + VK V+ Sbjct: 180 LGVAYE-VAAIYGREVKLPAINLQEATEKTSDYISVSVEAKEENPL--YIAKMVKNVKIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI Sbjct: 237 PSPMWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ Sbjct: 297 ETLDDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVF 406 K+LG+ ++S RFE+G+D ++H +L+ GG A + + A N+ + + Sbjct: 357 KDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQEHTVSV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V R+ G ++ + + L F F ++VP+ R D+ DLVEE+ R+ Sbjct: 417 TAEKVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHINVPARRPDITISEDLVEEVGRL 476 Query: 467 YGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 477 YGYDHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYM 533 Query: 526 GGQRELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 E +N P+S + S +R SL+P LL+A NV R A++EV ++ Sbjct: 534 VEPNEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAG 593 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + P+ ++++ AG+ G + W + + VD F K + + + + Sbjct: 594 ELPKEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQI 644 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + HPGR+ I E V+G+ G+ HP + N FE+ L + + Sbjct: 645 TYAPAKREGMHPGRTADIVLDGE-VIGFIGQLHPEAEKQLDVKNTFV-FELSLVKVFGAD 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ Sbjct: 703 AEETYYAAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKS+A + + T D+++ +R++ V +K A LR Sbjct: 760 MEEGKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|290580120|ref|YP_003484512.1| putative phenylalanyl-tRNA synthetase subunit beta [Streptococcus mutans NN2025] gi|254997019|dbj|BAH87620.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptococcus mutans NN2025] Length = 801 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 245/835 (29%), Positives = 424/835 (50%), Gaps = 66/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV ++ + +++ G+EVE VD E LS + VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSHELAEKMSTTGIEVEGVDVPAEGLSKLVVGHVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG+ + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGEEESRQIVCGAPNITAGIKVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPKEYSDGIQILPEDAVPGESIFPYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV---- 229 +A ++ A K ++ + +ES + DL ++ + V NV Sbjct: 180 VAHEVAAI---YDKSVHFEDKVLTESD--KKAADLIKVAIASDNVLTYKARVVENVTIKP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + D+L R+A +GEK+ Sbjct: 235 SPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEGKDILA-RQAKAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD + DL +++VI + ++AG++GG D ++ +V++E A++D +I ++ Sbjct: 294 VTLDGEARDLIEEDLVITVADKPVALAGVMGGAATEIDASSKNVVLEAAVFDGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT------------ASDICIAR 395 L + ++S RFE+GV+ + L +++ L GT DI ++ Sbjct: 354 SRLNLRSESSSRFEKGVNYADVAKALDFAAAMLTELADGTVLAGQVSAGAVPTDDIQVST 413 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 ++ Y ++ G D+ D + RLGF + G +KF VSVP R D+ Sbjct: 414 SLDYVNVRL-----------GTDLVFSDIESVFARLGFGLSGNDEKFTVSVPRRRWDISI 462 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVN 512 +ADLVEEI RIYG D+ LP T E L+ Q R ++ + + E+++ Sbjct: 463 QADLVEEIARIYGYDK-----LPTTLPEAAGTVGELTKSQKLRRKIRSLAEGSGLSEIIS 517 Query: 513 WSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++ + E++V F ++ E++ P++ + S +R +++ G+L NV R + A++E Sbjct: 518 YALTTPEKAVAFTPNPSKVTELMWPMTVERSALRQNIVSGMLDTIAYNVARKSNNLALYE 577 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIE 630 + V+E T + +K + I + + G L ++K + VD F AK L I Sbjct: 578 IGKVFEQ-TADPKKDLPKEIDTFAFALTG---LVTEKDFQTAATPVDFFYAKG-VLEAIL 632 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + + + + HPGR+ +I+ + V+GY G+ HP + + E+ Sbjct: 633 AKLEISVQFVATKEMANMHPGRTALIERDGQ-VIGYLGQVHPQTAKLYDIPETYVA-ELN 690 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVT 748 L+++ + K + + + V RD+A ++ + + +++ I V RL V Sbjct: 691 LNALEAALKSDLVFEDITKFPA---VSRDIALLLSEKVSHQDILDAIAASGVKRLT-KVK 746 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+ G+ LG+GKKS+A + Q D D+++ M +I + + +K A +R Sbjct: 747 LFDVYAGEKLGQGKKSMAYSLTFQNPNDNLTDEEVAKYMGKITKALTEKIGAEVR 801 >gi|289178494|gb|ADC85740.1| Phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis BB-12] Length = 868 Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 259/872 (29%), Positives = 398/872 (45%), Gaps = 98/872 (11%) Query: 5 LSWLKDHL--DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ + + E++ L +GLE E++ P + V+ P + + Sbjct: 6 MGWLREHVAVPENETYEELARDLVRVGLEEEEIHTSNVTGPIVVGYVVDATPEPQKNGKV 65 Query: 63 L---RIDTGK-HQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G+ + ++ ++CGAPN++ G V PG+ +P N + RK Sbjct: 66 INWCHVDVGEEYNDVDEHGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GNFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L +PI++++ Sbjct: 125 YGHISDGMCASERELGLGDSHDGIILLRDYGFTPEEYEALQPGDDAMHLLHLDEPILEIN 184 Query: 161 LTPNRSDCIGVRGIA-----------LDLVAAGLGKLKEINISCPLSSESIPLEIKFD-L 208 +TP+R RGIA D VAA + ++ + + + + + Sbjct: 185 VTPDRGYAFSYRGIAREFHNSTGAEFTDPVAAFEERAPQLEDQNGQTHDIDVIIDDDNPI 244 Query: 209 DDSSLCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 C F + V + + PNWMR RL G+RS+S VD+TNYV LD G P H + Sbjct: 245 HGVVGCDRFYVRAVHDYKPGSPTPNWMRHRLSRAGMRSLSLPVDVTNYVMLDLGQPMHAY 304 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGKH 321 D +IS + VRRA +GE ++ LD +++DL P++++I RI IAG++GG++ Sbjct: 305 DLDKISGPIVVRRAKAGETLVTLDGKKHDLDPEDLLITDSPNGEQGSRILGIAGVMGGEY 364 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 D TT++L+E A +DPI +ARS + I +++ RFERGVD Q + V L+ Sbjct: 365 GEVTDETTNILLEAAHFDPITVARSARRHKIPSEASRRFERGVDTQIQPAAAQMAVDLLT 424 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD- 440 ASD N + I F EVKRL+ +D+ I IL +G SV G + Sbjct: 425 KYGDAKASDTPRDVNNVKRGHPIAFKAGEVKRLTSLDLDINKISDILTDIGCSVAGGGNG 484 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 +F V+ PSWR D+ DLVEE+ RIYG D+I +P VE L+ Q R V Sbjct: 485 EFSVTAPSWRPDLTAACDLVEEVARIYGYDRIPVR-VPHAPVEGHVGLTDDQLHKRQVAD 543 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKA 555 LA ++EV+++ F+ K F E +EI+NP++ D +R +L L Sbjct: 544 ELAEYGLVEVLSYPFVGKADFKNFQIDSEEVEKVSVEIVNPLAGDRPFLRRQVLLTLATT 603 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEG--------------------------QKYMAA 589 RN+ R + + +E+ HVY D PE Q A Sbjct: 604 VQRNLHRGLENICCYELGHVYLAD-PEAPAVPALPGAQRPSDDQLSALDAGLPEQPLHVA 662 Query: 590 GIRKGSS---GIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 I G++ G G R W+D E R D AK + LD + Sbjct: 663 AILTGNAEDDGWLGDKRPVDWTDAVEAVHRIADRLGAK----------IVLDQSDGDKAG 712 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 W HPGR I S + +G GE HP + D G FE+ L ++ + + Sbjct: 713 AQW-HPGRVARI-MSGDTPVGVVGELHPKVDDALGFPRHSAAFEIDLTALFSTLSNKPVQ 770 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L I+ +++ + +FDV+ G +G+GKK Sbjct: 771 AKPI--STFPPVKQDLAFTVPTSVTAHELTETIRQAAGDVLESIELFDVYTGDQVGDGKK 828 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 S+A V + T D + RIVE Sbjct: 829 SLAYAVTFRAPDRTLTSQDSEEIRQRIVEKTA 860 >gi|257056550|ref|YP_003134382.1| phenylalanyl-tRNA synthetase beta subunit [Saccharomonospora viridis DSM 43017] gi|256586422|gb|ACU97555.1| phenylalanyl-tRNA synthetase beta subunit [Saccharomonospora viridis DSM 43017] Length = 838 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 263/869 (30%), Positives = 414/869 (47%), Gaps = 96/869 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVERNPD 57 M+ +SWL++HL+ DV+ + I D +G+EVE V+ ++ P I +V+ +E Sbjct: 1 MRVPVSWLREHLELSEDVTTDDIVDAFVRLGVEVEGVEPVGRITGPLVIGRVVEIEELTQ 60 Query: 58 LDCAI--LRIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNM 102 I R+D G ++ ++CGA N R G L V A PG+ +P + Sbjct: 61 FKKPIRYCRVDVGTPTDLDGGEIDPTRPPTNGIICGAQNFREGDLVVVALPGAVLP-GDF 119 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSL 161 ++ RK G S GM+CS +EL + +D + I+ LP A G + L L D +++++ Sbjct: 120 EISERKTYGHVSEGMICSARELGIGEDHSGILVLPPGTASPGDDAREVLALEDTVLELAP 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKE-INISCPLS-SESIPLEIKFDLDDSSLCKGFAM 219 TP+ + +RG+A +L A + +I P ++ P+ I +D C+ F + Sbjct: 180 TPDLGHALSIRGLARELACAFDAPYGDPAHIDVPEGEGDAWPVTI----EDPVGCRRFVL 235 Query: 220 CCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V G+ P W+++RL G+R IS VDITNYV L+ G+P H FD + L V Sbjct: 236 RRVTGLDAGAPTPWWIQRRLLLAGMRPISLAVDITNYVMLELGHPLHAFDTGSLQGGLVV 295 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 RRA GEK+ LD+ E L PD+VVIA D + S+AG++GG D++TDVL+E A W Sbjct: 296 RRAQPGEKLTTLDDVERTLDPDDVVIADDRGVISLAGVMGGASTEIRDDSTDVLLEAAHW 355 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 DP I+R+ + + +++ RFER D + + + +L G + Sbjct: 356 DPAAISRTARRHNLFSEAAKRFERFTD-PALCATAVEVAARLLRQYGDGSIRPGRTDEGQ 414 Query: 399 YKPRKIVFMNSEVK-RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSV----PSWRQD 452 +P + + M + +++G+ ++R L ++G V +G D V PSWR D Sbjct: 415 VEPAQSITMPINLPDQVAGVRFERGVTVRRLTQIGCKVSVGTGDDGTALVTAVPPSWRGD 474 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E+ ADLVEE+LR+ G D I S L R L+ Q R R V R LA +EV+ Sbjct: 475 LEQPADLVEEVLRLEGYDTIPSV---LPAAPAGRGLTAAQRRRRAVSRALAEAGYVEVIP 531 Query: 513 WSFISKEQSVLFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + F+S G + R + +LNP+ +D + TSLLPGLL+ RNV R D Sbjct: 532 FPFVSASVWDDLGLAEDDPRRRTVSVLNPLESDKDQLTTSLLPGLLETLQRNVARGFRDV 591 Query: 568 AIFEVSHVY-----------------------------ENDTPEGQKYMAAG--IRKGSS 596 A++ + V D P + AG R G Sbjct: 592 ALYHIGQVVLPGPEQSVAPDLRVDQRPAEEELAELERSVPDQPLHVAVVLAGERFRSGWW 651 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G EG W+D + R V A V LD E+ A +HPGR + Sbjct: 652 G-EGENASWADAVQA-ARLVGDVSA-----------VELD---IEADAVMPWHPGRCARL 695 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 V G+ GE HP +++ GL E+ LD+IP+ + + + +S PV Sbjct: 696 SIDGRTV-GHAGELHPKVVEKLGLPKRTAAMELNLDAIPVVEHRPAPS-----ISPFPPV 749 Query: 717 KRDLAFIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 D+A IVD+ +P+ + + L++DV++FDV+ G+ +GEGK+S+A ++ + Sbjct: 750 LLDVALIVDEKVPSAALAEALREAAGELVEDVSLFDVYSGEQVGEGKRSLAYKLRFRAPD 809 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T ++ D V V ++ AVLR Sbjct: 810 RTLTVEEATKARDAAVAAVGERFGAVLRG 838 >gi|265753489|ref|ZP_06088844.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_33FAA] gi|263235203|gb|EEZ20727.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_33FAA] Length = 820 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 244/829 (29%), Positives = 411/829 (49%), Gaps = 35/829 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ + LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAEALTSIGLETGGVEEVQTIKGGLEGIVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGA NV G V A G+ + + ++K +RGIE Sbjct: 61 NSDHMHVTTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGEECFTIKKSKLRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA G DY + S+ +++V +TPNR+D Sbjct: 121 SMGMICAEDEIGIGNSHEGIIVLPADAVPGTPAKDYFNIKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P ++ ++I +++++ C +A +KGV Sbjct: 181 GVARDLYAYLIQNGKQATLKRPSVEAFKVDNHDMDIAIEVENTEACPRYAGVSIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITN++ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNHILHAYGQPLHCFDADKIKGGKIVVKTVAEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A ++P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNTEEPMCIAGVFGGLDSGTTEQTVDVFLESAYFNPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TDS +RFERG+D G I LK L+ L GGT S V + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGTIYALKEAALLVQELAGGTISSEIKDNYPAPIADFTVEL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 N E V L G +P+E I+ L ++ E + VP +R DV+ D+VE+ILR Sbjct: 421 NYEKVHSLIGKTIPVETIKSIVTSLEMKIVNETPGGLTLQVPPYRVDVQRDCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQSVL 523 IYG + ++ + + K + Q + L E++N S S + + Sbjct: 481 IYGYNNVEIPTTLKSSLTTKGEVDYSQKLQNLISEQLVGCGFNEILNNSLTAASYYEGLE 540 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKNENLVYLMNPLSNDLNVMRQTLLFGGLESIQHNANRKNADLKFFEFGNCYFYNAEKK 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ ++ ++ Sbjct: 601 NPE--KVLAAYAEEYHLGLWVTGKRVSNSWAHPDENSSVYELKAYVLNIFTRLGLNFGNV 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG I F + N EVY I + Sbjct: 659 VFGNLTNDIYSTAIS--VHTRGGKLLATFGIISKKIQKAFDIDN-----EVYYAEINWKE 711 Query: 699 -KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 K K+ KV LS VKRDLA ++D++I + I + +L+ +V +FDV++ Sbjct: 712 LMKAIKSAKVNFKELSKFPAVKRDLALLIDKNIQFAEIEKIAYETEKKLLKEVKLFDVYE 771 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK+L KKS A+ L+Q T D I +M +++ N+ K A LR Sbjct: 772 GKNLEPDKKSYAVSFLLQDENATLNDKQIDKIMSKLIANLENKLGAKLR 820 >gi|312109969|ref|YP_003988285.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus sp. Y4.1MC1] gi|311215070|gb|ADP73674.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. Y4.1MC1] Length = 804 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 241/829 (29%), Positives = 433/829 (52%), Gaps = 52/829 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 M + WL++++D T ++ +++ D +T G+EVE V+ N+ A + VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLTGITAKELADRITKSGIEVESVEVLNKGA-KGVVVGHVLEREQHPN 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +D G+ + +Q++CGAPNV G A G+ +P + + K+RG ES G Sbjct: 60 ADKLSKCLVDIGEGEPVQIICGAPNVAKGQKVAVAKVGAVLP-GGLKIKRAKLRGEESNG 118 Query: 117 MMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS E +L+ + + I P DAPVG + L L D ++++ LTPNR+DC+ Sbjct: 119 MICSLQELGIESKLVPKEYTDGIFVFPSDAPVGADALELLNLDDEVLELGLTPNRADCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + G+A + VAA LG+ N+ P++ E++ I +D +A VK V Sbjct: 179 MIGVAYE-VAAILGR----NVKLPVTEIQENGENVHDYISVRVDAPEDNPVYAGRIVKNV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 + +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +G Sbjct: 234 KIGPSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIIVRRAKAG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E I+ LD+ + L+ D++VI + ++AG++GG ++ D+TT V +E A + I Sbjct: 294 ETIVTLDDTKRTLTEDHLVITNGTEPVALAGVMGGANSEVRDDTTTVFIESAYFTSPAIR 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K+LG+ +++ RFE+G+D L +L+ GG + N T K +++ Sbjct: 354 KASKDLGLRSEASTRFEKGIDPARTKEALDRAAALMAEYAGGEVIGGVVEVN-TLKEQEV 412 Query: 405 VFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + + R+ G + ++ IL L F+ F ++VPS R+D+ + D++EE Sbjct: 413 TVTVTLDRINRVLGTAITKDEVAAILTNLQFAFTENNGTFTITVPSRRRDISIEEDIIEE 472 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + R+YG D++ + LP+ + + + L+ Q++ R V+R L + + + +S S E++ Sbjct: 473 VARLYGYDRLPA-TLPVAEAKPGK-LTPYQAKRRQVRRYLEDVGLFQAITYSLTSAEKAT 530 Query: 523 LFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----E 577 +F E + + P+S + S +R SL+P LL+ N R + + A++E VY E Sbjct: 531 MFALETAEPIRLALPMSEERSVLRQSLIPHLLEVASYNRARQVENVAVYETGAVYLASGE 590 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 N+ P +K AGI G LW + + VD + AK + E + Sbjct: 591 NELP-SEKERLAGIITGV----WHAHLWQGEK----KAVDFYVAKGILDGLFELLGLTNR 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + ++ HPGR+ I + V G+ G+ HP + + L E Y+ + ++ Sbjct: 642 IEYKQAKREHMHPGRTADILLDGKTV-GFVGQLHPVVQKEYDLK------ETYVFELALA 694 Query: 698 QKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQ 754 T + + + + + RD+A +VD+++ AG L II+ L+ +V++FDV++ Sbjct: 695 DLLNTDVEDIRYAPIPRFPSIARDIALVVDENVVAGELQKAIIEAGGSLLKEVSIFDVYK 754 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G L +GKKS+A + + T D+++ + +++++ V ++ A LR Sbjct: 755 GDRLPDGKKSIAFSLRYYDPERTLTDEEVTAVHEKVIQAVKQQFGATLR 803 >gi|291485295|dbj|BAI86370.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. natto BEST195] Length = 804 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 239/825 (28%), Positives = 414/825 (50%), Gaps = 44/825 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGAEAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 NGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K P +SE I ++D + +K V Sbjct: 177 MNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE LS D++VI + + Q++AG++GG + ++T +L+E A ++ + ++ Sbjct: 297 VTLDDQERKLSADHLVITNGMKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQTVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 K+LG+ +DS RFE+G+D + + LI GG + ++T + I Sbjct: 357 KDLGLRSDSSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ + I +RLGF+V + V+VPS R D+ + DL+EE R+ Sbjct: 417 SADKVSSVLGLTISKEELISIYKRLGFTVGEAGELLVVTVPSRRGDITIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + + +S +++++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKAAAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL + N+ R A++EV V+ E DT Sbjct: 535 EKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + AG G LW + + + VD F K +++ LDS+ F Sbjct: 595 VETERVAGAVTG---------LWRKQLWQGEKKPVDFFVVKGIVEGLLDKLNVLDSIEFV 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I + ++ G+ G+ HP++ + E Y+ + + Sbjct: 646 QSERKQLHPGRTANILLNGSLI-GFIGQVHPSLEKELDIK------ETYVFELDLHALLA 698 Query: 702 TKTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 +T +V+ + +P V RD+A + D+ + +G L ++IK +L+ +VTVFDV++G+ + Sbjct: 699 AETAPLVYTAIPKYPSVTRDIALVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHM 758 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ ++++ + AVLR Sbjct: 759 EEGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQAVLR 803 >gi|125717755|ref|YP_001034888.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus sanguinis SK36] gi|125497672|gb|ABN44338.1| Phenylalanyl-tRNA synthetase beta chain, putative [Streptococcus sanguinis SK36] Length = 801 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 242/824 (29%), Positives = 431/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFSLVENQKQAAESLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLNTFEGDHIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG + +T V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGAATEISNQSTRVVLEAAVFDGKSIRKTSSR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFTFNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEDL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E L E A + Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPAAVDFFYAKG----VVEALFDKLGLTAEYAASN 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G LG Sbjct: 699 QPEQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 758 VGLKSMAYSLTFQNPESSLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|258512093|ref|YP_003185527.1| phenylalanyl-tRNA synthetase, beta subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478819|gb|ACV59138.1| phenylalanyl-tRNA synthetase, beta subunit [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 803 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 263/834 (31%), Positives = 414/834 (49%), Gaps = 69/834 (8%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 M+ + WL ++LD +S ++ D LTS GL V+ VD NR + I K+L V +P Sbjct: 1 MRASYKWLAEYLDLAGLSPAELADRLTSAGLAVDAVDPLNR-GVEGVVIGKILEVRPHPQ 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + R+D G Q +++VCGAPN GL+ A PG+ +P + + + + RG+ S G Sbjct: 60 ADRLKVCRVDVGGRQ-LEIVCGAPNAAPGLVVPVALPGAKLP-GGVEIRIAEFRGVSSHG 117 Query: 117 MMCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL + D + LP D P+G + +L L D ++D+ LTPNRSDC+ Sbjct: 118 MLCSADELGIETRYLPKRDVEGLFVLPEDLPLGEDVVPHLHLDDVVLDLDLTPNRSDCLS 177 Query: 171 VRGIALDLVAAGLGKLK-EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 +RG+ +L A + ++ P + PL+++ + + C + ++GV Sbjct: 178 IRGLVHELSAILRRPHRFPASVPAPAAEGESPLQVRLE---TPRCPRYEAQLLEGVEVRE 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 P WM+ RL A+G+RSI +VD+TNYV L+ G P H FDA I+ + VR+A GE+++ Sbjct: 235 TPLWMKMRLLAMGVRSIDLVVDVTNYVMLEWGQPLHAFDADAIAHATIVVRQAREGERLV 294 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+PD +VIA + +AG++GG+++ +T + +E A +D +I R+G+ Sbjct: 295 TLDGQERALTPDMIVIADPEKAIGLAGVMGGENSEIGPSTRRIALESARFDGASIRRTGQ 354 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKIV 405 L + ++++ RFE+GVD + L L++ L G A A+ KP I Sbjct: 355 ALSLRSEAQQRFEKGVDPAAVSSALHRATELLVQLAGSRPVGAPRRVPAQADVSKPTVIS 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 F R G+DVP E+ E LGF V +++ V VP+ R DV+ ADL EE+ R Sbjct: 415 FSPRACARFLGVDVPEEEMRACFESLGFDVTQGENEWRVEVPTRRPDVQLPADLYEEVAR 474 Query: 466 IYGVDQIK--SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +YG D I S LP+ E L L R V+R L + EV ++ S E Sbjct: 475 LYGYDHIPATSMRLPVEAPESSGQLML----VRKVRRALVDWGLHEVRTYALTSPEAEAP 530 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + +L P+S D +R LLP L + N+ + AIFEV G Sbjct: 531 VAPSGVPVPLLRPMSDDRRTLRRHLLPSLAEVARHNLAHQVLGGAIFEV----------G 580 Query: 584 QKYMAAGIRKGSSGIEGS--GRLWSDKSE----ERCRFVDLFDAKADALSVIEPFVSLDS 637 + ++AA + + E + G LW + E ER R D +DAK +++ + Sbjct: 581 KVFLAASWPQEALPEERAVLGMLWFGEPEGDPFERPRRYDFYDAKGVCDALLARLGIQAT 640 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG-FEV-YLDSIP 695 R A + HPGR I+ + E V G GE HP++ + + + + F++ L S+ Sbjct: 641 YRVSQHA--YLHPGRQASIEVNGEPV-GLVGELHPDVGEAYEVERAVYAEFDLGRLLSLA 697 Query: 696 ISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVDRLIDD------VT 748 S+ + + HP +RDLA +V + + + LV+ R + D V Sbjct: 698 SSEVRVLPIPR-------HPASRRDLAVVVPRELESQALVDAAW---RTLGDRGDLRLVR 747 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 VFDV+ G + EG KS+A+ + Q + T D +I D VE V++ A Sbjct: 748 VFDVYTGVGVPEGHKSLAVALWFQRDERTLTDAEI----DEAVEAVLRAWEAAF 797 >gi|320546487|ref|ZP_08040802.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] gi|320448872|gb|EFW89600.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus equinus ATCC 9812] Length = 801 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 247/831 (29%), Positives = 421/831 (50%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E L+ + V+S E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTHELSEKMSTTGIEVEGVSTPSEGLTKLVVGHVVSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQIVCGAPNVTAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L + S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 120 SLQELGLPESIIPKEFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKEVKEVSKAAKDVIDVAI-----ESDKVLTYKARVVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ +++ R A GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEGNIIVARNAREGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI + ++AG++GG+ D N+ +V++E A++D +I R+ Sbjct: 294 VTLDGEERELIAEDLVITVADKPVALAGVMGGQDTEIDSNSKNVVLEAAVFDGTSIRRTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 L + ++S RFE+G++ + L +++ L G D+ R P + V Sbjct: 354 GRLNLRSESSARFEKGINYATVDEALDFAAAMLTELAEG---DVLAGRVEAGSVPTEDVE 410 Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +++ + ++ G ++ D + +LGF + G DKF VSVP R D+ +ADLVEEI Sbjct: 411 VSTTLDYVNVRLGTELTYADIEDVFAKLGFGLSGNADKFTVSVPRRRWDIAIQADLVEEI 470 Query: 464 LRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 RIYG + + P L Q L+ Q R ++ + + + E+V+++ + E++ Sbjct: 471 ARIYGYENL---PTTLPQAAGTAGELTATQKLRRKMRSIAEAAGLSEIVSYALTTPEKAT 527 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--- 578 F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ V+E Sbjct: 528 EFTLQPSNLTELMWPMSVERSVLRQNVVSGMLDTIAYNVARKNSNLAIYEIGKVFEQKGN 587 Query: 579 ---DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VS 634 D P A I SG + + + VD F AK ++ ++ Sbjct: 588 PKVDLPNEINTFAFAI---------SGLVAEKDFQTKATPVDFFYAKGIVEAIFNKLDLT 638 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +D + E G S HPGR+ I ++V G+ G+ HP + + E+ LD I Sbjct: 639 VDYVA-EKGLDSM-HPGRTASIYLDDKLV-GFVGQIHPQTAKNYNVPETYVA-ELNLDVI 694 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDV 752 + K V ++ V RD+A ++ +V I+ V RL D+ +FDV Sbjct: 695 ---EAALEADKAFVEITKYPAVSRDIALLLPAATTHKDIVTAIELAKVKRLT-DIKLFDV 750 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G ++ EG KS+A + Q D D+++ MD+I + +V++ A +R Sbjct: 751 YAGANIAEGMKSMAYSLTFQNPNDNLTDEEVTKYMDKITKVLVEQLGAEVR 801 >gi|312127654|ref|YP_003992528.1| phenylalanyl-tRNA synthetase subunit beta [Caldicellulosiruptor hydrothermalis 108] gi|311777673|gb|ADQ07159.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor hydrothermalis 108] Length = 791 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 244/823 (29%), Positives = 423/823 (51%), Gaps = 53/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK +D D S++++ D LT G +VE + R E + + K+L + +P + Sbjct: 1 MKVSLEWLKSFVDIDCSVDELVDKLTMSGTKVEGYEKRLENIKNVVVGKILEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++DT + + + ++ A NV+ GL A PG+ + N ++V + +GI S GM+ Sbjct: 61 NLFVCKVDT-RDKILTIITAAKNVKPGLYVPLAKPGAVLA-NGKTIDVLEFKGIVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFSYADENGIFILEGMDDSMIGTDIKIALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 V GIA ++ A LK N+S + E + I ++ + +C+ + +K V+ Sbjct: 179 VVGIAREIAAILNKPLKFPNLSFKETDEPVKNYIDSIEIQNKKICRRYMGRVIKNVKIEE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A GEKI+ Sbjct: 239 SPLWLRRRLVACGVRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLASDGEKIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L P ++VIA + R ++AG++GG D++TT VL+E A ++P + R+ + Sbjct: 299 TLDGVERVLRPSDIVIADEKRAIAVAGVMGGLDTEVDESTTLVLLESATFNPAMVRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAELAIQRACALIEQIGAGEVVKGAVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEKADLVEEILR 465 S +++L G+ + + L IL RL EYDK + +P +R D+E+ AD+ EE++R Sbjct: 419 FSYIEKLLGLRIEKGEVLNILSRLEI----EYDKEKEVFIIPPFRTDIEDMADISEEVIR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ S + L+ +Q +K LA+ E+ ++SF S + + Sbjct: 475 IYGYDKLPSRVFMGNAISS--GLTQKQRMVNNIKNFLANSGYYEIYSYSFESPKVYEVLK 532 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 G + ++I NP+ D S MR LL +LK N+ R I D IFE+S V++ + Sbjct: 533 GYNLDDAVKISNPLGEDFSIMRMQLLSSVLKTVYLNISRNIKDVKIFELSTVFKKSNEKL 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ + I GSS D + +LFD + + ++F S Sbjct: 593 PQEKLVLAI--GSSA--------QDFYSLKGVLENLFD-----------MLRIKDVKFSS 631 Query: 643 GAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP RS I T ++GY GE HP+IL+ F + + E+++D + ++KK Sbjct: 632 QHQNPNLHPTRSAKIYTEESFLIGYIGEVHPDILERFDIPTRVVYAELFIDELLEAEKKE 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 K+ V L V+RD AF+V + + + I K ++++ +FDV++G+ + Sbjct: 692 ---KRYVQLPKYPAVERDYAFVVPDDVESRVIEEIFKKYSSDILEEFRLFDVYKGQQIKP 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS A + + + T D DI + +++++ +K N LR Sbjct: 749 GFKSYAYKAVFRSKSKTLSDSDINQIQEKVLDE-LKNYNISLR 790 >gi|255691588|ref|ZP_05415263.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides finegoldii DSM 17565] gi|260622798|gb|EEX45669.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides finegoldii DSM 17565] Length = 820 Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 248/833 (29%), Positives = 424/833 (50%), Gaps = 43/833 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGEGDPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPENAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDDFKVENHDLDIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VD+TNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDVTNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLSDRDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK--I 404 + G+ TD+ +RFERG+D +I LK ++ L GGT +S+I +++ P + I Sbjct: 361 RRHGLNTDASFRFERGIDPNSVIYCLKLAAIMVKELAGGTISSEI---KDVYTTPAQDFI 417 Query: 405 VFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 V ++ E V L G +P+E I+ L + E + ++VP +R DV+ D++E+ Sbjct: 418 VDLSYEKVHSLIGKVIPVETIKSIVTSLEMKITNETQEGLTLAVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 ILRIYG + ++ + + K V L E++N S ++ Sbjct: 478 ILRIYGYNNVEIPTTLKSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLT---RAA 534 Query: 523 LFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 + G R + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 535 YYDGLETYPSNRLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFGNCYY 594 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VS 634 + D +K +A G+ +G+ S+ +++ KA ++++ + Sbjct: 595 FDGDKKNPEKALAPYSEDYHLGLWVTGKKVSNSWAHPDENSSVYELKAYVENILKRLGLD 654 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 L +L + + + S + T L FG +L F + N EVY + Sbjct: 655 LHNLVIGNLSDDIFAAALS--VHTKGGKRLASFGVVTKKLLKAFDIDN-----EVYFADL 707 Query: 695 PISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + K ++ KV + LS V+RDLA ++D+++ + I + +L+ +V +F Sbjct: 708 NWKELLKAVRSAKVSYKELSKFPAVRRDLALLLDKNVQFAEIEKIAYETEKKLLKEVELF 767 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 768 DVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|331697621|ref|YP_004333860.1| Phenylalanyl-tRNA synthetase subunit beta [Pseudonocardia dioxanivorans CB1190] gi|326952310|gb|AEA26007.1| Phenylalanyl-tRNA synthetase beta chain [Pseudonocardia dioxanivorans CB1190] Length = 846 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 265/856 (30%), Positives = 408/856 (47%), Gaps = 113/856 (13%) Query: 1 MKFTLSWLKDHLDTDVSLE--KICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVERNPD 57 M+ +SWL DH++ D+ + +I + +GLE+E V E ++ P + +VL + + Sbjct: 1 MRVPVSWLADHVEGDLPADADEIGEAFVRVGLEIEDVHRAEEITGPLVVGRVLEITELTE 60 Query: 58 LDCAI--LRIDTG-KHQE--------------IQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 I R+D G +H + +VCGA N VG L V A PGS +P Sbjct: 61 FKKPIRYCRVDVGDEHNDPAGEDPAGGTGGGSRGIVCGARNFVVGDLVVVALPGSVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDV 159 + RK G S GM+ S +EL + D A I+ LP V G L + DP+I++ Sbjct: 120 GFAIAARKTYGHVSDGMIASARELGIGSDHAGILVLPEGTAVPGDDARPVLGIDDPVIEL 179 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEI----KFDLDDSSLCK 215 ++TP+R C VRG+A +L AA LG+ + + P + ++P E LDD+ C Sbjct: 180 NVTPDRGYCFSVRGLAREL-AASLGR----DFTDPAARVAVPAEAAESWPVRLDDAEGCP 234 Query: 216 GFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD 274 F V GV N +P W+R+RL A G+R IS VD+TNYV ++ G P H +DASR+ Sbjct: 235 RFVARRVTGVDPNAPSPWWLRRRLLAAGMRPISLTVDVTNYVMIELGQPLHAYDASRLQG 294 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN-----TT 329 + VRRA +GEK+ LD+ E L PD+++I D +AG++GG + T Sbjct: 295 PIVVRRARAGEKLRTLDDAERALDPDDLLITDDSGPIGLAGVMGGASTEIPETHEPGATI 354 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTA 388 DVL+E A +DP IAR + + +++ RFER VD Q + PV + L++ GGT Sbjct: 355 DVLIEAAHFDPATIARGARRHKLPSEASRRFERAVDAQ-LPPVAAERAAQLLVEHGGGTI 413 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGEYDKFEV- 444 P + R +G+ +++ L ++G +V G K V Sbjct: 414 VAGRTDVGAAPVPAPVRMALDLPDRTAGVAYARGATVQRLTQIGATVELETGPDGKGVVV 473 Query: 445 -SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 + PSWR D+ ADLVEE+LR+ G+D I S L R L+ Q R R V R LA Sbjct: 474 ATPPSWRPDLAMAADLVEEVLRLEGLDVIPSV---LPSAPAGRGLTAAQRRRRAVSRALA 530 Query: 504 SRAMMEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGR 558 +EV+ + F+ FG +R + ++NP+ A+ ++ T+LLPGLL A R Sbjct: 531 EAGYVEVLPFPFVGDAVWDAFGLAADDVRRRTVTVVNPLDAERGSLATTLLPGLLDAVVR 590 Query: 559 NVDRAIADFAIFEVSHVY--------------------------ENDTPEGQKYMA---A 589 N R + D A+F V V + P +++A A Sbjct: 591 NRSRGLDDVALFHVGQVVLPHAQPVAMPEPGVRVRPSAAEYAQIDAALPAQPQHVAVVLA 650 Query: 590 GIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G R+ G G GR W+D E R V V+ LR G + Sbjct: 651 GERE-PRGWWGPGREAGWADAVEA-ARLVGR--------------VAGVELRVTKGELAP 694 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR+ +++ + +G+ GE HP +++ GL C E+ LD +P+ T + V Sbjct: 695 FHPGRTAVLRVG-DFPVGHAGELHPKVVEALGLPPRTCAMELDLDLVPL-----TDPRPV 748 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S PV D+A + +P + + + L+++V +FDV+ G +GEG++S+A Sbjct: 749 PRVSPYPPVAVDVALVTPDDVPVADVADALEEGGGELLEEVRLFDVYSGAQVGEGRRSLA 808 Query: 767 IQVLIQPLKDTFRDDD 782 + FR DD Sbjct: 809 FSL-------RFRADD 817 >gi|257438396|ref|ZP_05614151.1| phenylalanyl-tRNA synthetase, beta subunit [Faecalibacterium prausnitzii A2-165] gi|257199227|gb|EEU97511.1| phenylalanyl-tRNA synthetase, beta subunit [Faecalibacterium prausnitzii A2-165] Length = 803 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 262/838 (31%), Positives = 422/838 (50%), Gaps = 90/838 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLK+ +D DV+ +++ + L S G EVE++ +A +S + K++ +E+ Sbjct: 1 MKVPFSWLKEFVDIDVTAQELEEKLFSCGFEVEELIPLDAGISKVVVGKIVEMEKQEGTH 60 Query: 60 CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G + +I++ GA N+++G A GS +P + + RK++G+ES GM+ Sbjct: 61 LTKCVVDCGDYGHDIRISTGAANMKLGDCVPAALDGSTLP-GGIKIKARKMQGVESNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L+DD ++ LP D+ G ++ + L D I D+S+T NR DC V Sbjct: 120 CSGEELGLNDDLFPGSEVYGLLILPEDSVPGTDIAPVVGLDDYIFDISITANRPDCQSVL 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA LGK + ++ ++ P+ ++ + D LC + V+ +R Sbjct: 180 GIARE-VAAILGKPLHMPAMDYKAVCEPDA-PITVQVEAPD--LCPRYMAHYVRNIRMGE 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++ L GLRSIS +VDITN+ L+ G P H FD ++++ + VRRA GEKI+ Sbjct: 236 SPRWMKRHLALCGLRSISNVVDITNHTLLEMGQPMHAFDLNKVAGRTIDVRRAHEGEKIV 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E+ L+P+N+VI + ++AGI+GG ++G D+NTT +L E A + + ++ + Sbjct: 296 TLDEKEFTLNPNNLVICDAEKPVALAGIMGGANSGMDENTTSLLFECATFARDCVRKTSR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS---DICIARNITYKPRKI 404 LG +DS R+E+GVD L + LI L CG + D+ R + K I Sbjct: 356 ALGQNSDSSARYEKGVDRNSPELGLARALHLIQELDCGDITTLEYDLTDGRPLERK--HI 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEI 463 V +++ + GI VP + + IL+RL F+V + D ++VS P +R+DVE DL EE+ Sbjct: 414 VTTPAKICGVLGITVPEQTMIDILQRLEFTVDVQADGSWDVSAPLYREDVESFPDLAEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R YG D I L V + L+ Q + KR+LA++ E +F S + + Sbjct: 474 IREYGYDHINPTFLNTASVTNG-GLNYAQKQQLKTKRLLAAQGFYEASTLAFYSNAELDM 532 Query: 524 FG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE- 577 ++ + ILNPIS ++S MRT L P +L N+ + A+ +FE++ VY Sbjct: 533 LHIPAEDAARKAIRILNPISENLSIMRTLLTPSMLNVIVDNLKKGNAEGRLFEMAPVYLA 592 Query: 578 -----NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 ++ P ++ + G + EE D F K A+ + Sbjct: 593 KELPISEHPHERQTLCIG---------------AFGPEE-----DFFTVKG-AMEALAAG 631 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG------ 686 L + +E W HPG S + + + LG FG+ LSN I G Sbjct: 632 FDL-TFTYERETTPWLHPGISAAVYCNGK-RLGVFGK----------LSNEINGELEIAK 679 Query: 687 -----FEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 +YL + ++ + LS VKRDLA + ++ I G + + IK Sbjct: 680 DQKDSQNIYLGELDYEALMSCVDGELRYKPLSPYAAVKRDLALVCEEKITCGEIEDTIKK 739 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 LI +V +FD+++G +LGEGKKS+A + T D I D+ VE VKK Sbjct: 740 ASSLITEVKLFDIYRGANLGEGKKSMAFSL-------TLSDPSAEISADQ-VERTVKK 789 >gi|299146136|ref|ZP_07039204.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_23] gi|298516627|gb|EFI40508.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_23] Length = 820 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 247/834 (29%), Positives = 423/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPENAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG+D +I LK + ++ L GGT S T P IV + Sbjct: 361 RRHGLNTDASFRFERGIDPNSVIYCLKLVALMVKELAGGTISSEIKDVFTTPAPDFIVDL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 E V L G +P+E I+ L + E + ++VP +R DV+ D++E+ILR Sbjct: 421 AYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISKEQS 521 IYG + ++ +P T + + ++ ++ ++A + E++N S ++ Sbjct: 481 IYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGMETYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 + D +K +A G+ +G+ S+ +++ KA ++++ + Sbjct: 594 HFDADKKNEEKILAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L +L + + S I T L FG +L F + N EVY Sbjct: 654 DLHNLVVGNLTDDIFAAALS--INTKGGKRLASFGIVTKKLLKAFDIDN-----EVYFAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ K+ + +S VKRDLA ++D+++ + I + +L+ +V + Sbjct: 707 LNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYETEKKLLKEVEL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|239827984|ref|YP_002950608.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus sp. WCH70] gi|239808277|gb|ACS25342.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. WCH70] Length = 804 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 242/823 (29%), Positives = 435/823 (52%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 M + WL++++D T ++ +++ D +T G+EVE V+ N+ A + VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLTGITAKELADLITKSGIEVESVEVLNKGA-KGVVVGHVLEREQHPN 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +D G+ + +Q++CGAPNV G A G+ +P N+ + K+RG ES G Sbjct: 60 ADKLSKCLVDIGEGEPVQIICGAPNVAKGQKVAVAKVGAVLP-GNLKIKRAKLRGEESNG 118 Query: 117 MMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS E +L+ + + I P DAPVG + L L D ++++ LTPNR+DC+ Sbjct: 119 MICSLQELGVESKLVPKEYADGIFVFPSDAPVGADALELLNLDDEVLELGLTPNRADCLS 178 Query: 171 VRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 + G+A + VAA LG+ +K I ++E++ I +D +A VK V+ Sbjct: 179 MIGVAYE-VAAILGRDVKLPTIELQENNENVHDYISVRVDAPQDNPLYAGRIVKNVKIGP 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I+ Sbjct: 238 SPLWMQTRLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAGETIV 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ + L+ D++VI + ++AG++GG ++ D+TT V +E A + I ++ K Sbjct: 298 TLDDTKRTLTEDHLVITNGTEPVALAGVMGGANSEVRDDTTTVFIESAYFTSPVIRKASK 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 + G+ +++ RFE+G+D L +L+ GG + N T K +++ Sbjct: 358 DHGLRSEASTRFEKGIDPARTKEALDRAAALMAEYAGGEVVGGVVEVN-TLKEKEVTVTI 416 Query: 409 S--EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + R+ G + ++ IL L F+ + F ++VPS R+D+ + D++EE+ R+ Sbjct: 417 TLDRINRVLGTMITKDEVATILTNLQFAFTEDNGTFTITVPSRRRDITIEEDIIEEVARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D++ + LP+ + + + L+ Q++ R V+R L + + + +S S+E++ +F Sbjct: 477 YGYDRLPA-TLPVAEAKPGK-LTPYQAKRRQVRRYLEDVGLFQAITYSLTSEEKATMFAL 534 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SLLP LL+ N R + + A++E VY EN+ P Sbjct: 535 ETAEPIRLALPMSEERSVLRQSLLPHLLEVASYNRARQVENVAVYETGAVYLANGENELP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +K AG+ G LW + + VD + AK + E + + ++ Sbjct: 595 -SEKERLAGVLTGV----WHAHLWQGEK----KAVDFYVAKGILDGLFELLGLTNRIEYK 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I + + G+ G+ HP + + L FE+ L + ++ + Sbjct: 646 QAKREHMHPGRTAHILLDGKTI-GFVGQLHPVVQKEYDLKETYV-FELALTDLLNAEVED 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGE 760 + + S + RD+A +VD+++ AG L II+ L+ +V++FDV+QG L + Sbjct: 704 IRYSPIPRFPS---ITRDIALVVDENVVAGELQKAIIEAGGELLKEVSIFDVYQGDRLPD 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ + +++++ V ++ A LR Sbjct: 761 GKKSIAFSLRYYDPERTLTDEEVTAVHEKVIQAVEQQFGATLR 803 >gi|183601744|ref|ZP_02963114.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis HN019] gi|241190758|ref|YP_002968152.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196164|ref|YP_002969719.1| phenylalanyl-tRNA synthetase subunit beta [Bifidobacterium animalis subsp. lactis DSM 10140] gi|183219350|gb|EDT89991.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis HN019] gi|240249150|gb|ACS46090.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis Bl-04] gi|240250718|gb|ACS47657.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis DSM 10140] gi|295793747|gb|ADG33282.1| phenylalanyl-tRNA synthetase beta chain [Bifidobacterium animalis subsp. lactis V9] Length = 863 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 259/872 (29%), Positives = 398/872 (45%), Gaps = 98/872 (11%) Query: 5 LSWLKDHL--DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ + + E++ L +GLE E++ P + V+ P + + Sbjct: 1 MGWLREHVAVPENETYEELARDLVRVGLEEEEIHTSNVTGPIVVGYVVDATPEPQKNGKV 60 Query: 63 L---RIDTGK-HQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G+ + ++ ++CGAPN++ G V PG+ +P N + RK Sbjct: 61 INWCHVDVGEEYNDVDEHGNKVPRGIICGAPNMKAGEKVVVTLPGAVLP-GNFKIEPRKT 119 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L P + G L L +PI++++ Sbjct: 120 YGHISDGMCASERELGLGDSHDGIILLRDYGFTPEEYEALQPGDDAMHLLHLDEPILEIN 179 Query: 161 LTPNRSDCIGVRGIA-----------LDLVAAGLGKLKEINISCPLSSESIPLEIKFD-L 208 +TP+R RGIA D VAA + ++ + + + + + Sbjct: 180 VTPDRGYAFSYRGIAREFHNSTGAEFTDPVAAFEERAPQLEDQNGQTHDIDVIIDDDNPI 239 Query: 209 DDSSLCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 C F + V + + PNWMR RL G+RS+S VD+TNYV LD G P H + Sbjct: 240 HGVVGCDRFYVRAVHDYKPGSPTPNWMRHRLSRAGMRSLSLPVDVTNYVMLDLGQPMHAY 299 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGKH 321 D +IS + VRRA +GE ++ LD +++DL P++++I RI IAG++GG++ Sbjct: 300 DLDKISGPIVVRRAKAGETLVTLDGKKHDLDPEDLLITDSPNGEQGSRILGIAGVMGGEY 359 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 D TT++L+E A +DPI +ARS + I +++ RFERGVD Q + V L+ Sbjct: 360 GEVTDETTNILLEAAHFDPITVARSARRHKIPSEASRRFERGVDTQIQPAAAQMAVDLLT 419 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD- 440 ASD N + I F EVKRL+ +D+ I IL +G SV G + Sbjct: 420 KYGDAKASDTPRDVNNVKRGHPIAFKAGEVKRLTSLDLDINKISDILTDIGCSVAGGGNG 479 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 +F V+ PSWR D+ DLVEE+ RIYG D+I +P VE L+ Q R V Sbjct: 480 EFSVTAPSWRPDLTAACDLVEEVARIYGYDRIPVR-VPHAPVEGHVGLTDDQLHKRQVAD 538 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKA 555 LA ++EV+++ F+ K F E +EI+NP++ D +R +L L Sbjct: 539 ELAEYGLVEVLSYPFVGKADFKNFQIDSEEVEKVSVEIVNPLAGDRPFLRRQVLLTLATT 598 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEG--------------------------QKYMAA 589 RN+ R + + +E+ HVY D PE Q A Sbjct: 599 VQRNLHRGLENICCYELGHVYLAD-PEAPAVPALPGAQRPSDDQLSALDAGLPEQPLHVA 657 Query: 590 GIRKGSS---GIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 I G++ G G R W+D E R D AK + LD + Sbjct: 658 AILTGNAEDDGWLGDKRPVDWTDAVEAVHRIADRLGAK----------IVLDQSDGDKAG 707 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 W HPGR I S + +G GE HP + D G FE+ L ++ + + Sbjct: 708 AQW-HPGRVARI-MSGDTPVGVVGELHPKVDDALGFPRHSAAFEIDLTALFSTLSNKPVQ 765 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 K + S+ PVK+DLAF V + A L I+ +++ + +FDV+ G +G+GKK Sbjct: 766 AKPI--STFPPVKQDLAFTVPTSVTAHELTETIRQAAGDVLESIELFDVYTGDQVGDGKK 823 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 S+A V + T D + RIVE Sbjct: 824 SLAYAVTFRAPDRTLTSQDSEEIRQRIVEKTA 855 >gi|239940051|ref|ZP_04691988.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces roseosporus NRRL 15998] gi|239986540|ref|ZP_04707204.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces roseosporus NRRL 11379] gi|291443480|ref|ZP_06582870.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces roseosporus NRRL 15998] gi|291346427|gb|EFE73331.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces roseosporus NRRL 15998] Length = 837 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 261/873 (29%), Positives = 422/873 (48%), Gaps = 104/873 (11%) Query: 1 MKFTLSWLKDHLD---TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE-- 53 M+ LSWL++++D T+ + + L S+GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPETETGRD-VQAKLVSVGLEVETVEQIGAGLKGPLVVGQVLTIEEL 59 Query: 54 ---RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + P C + TG+ QEI VCGA N VG V PG+ +P + + R Sbjct: 60 EGFKKPIRFCTVDVGTANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLP-GDFAIAAR 116 Query: 108 KIRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 K G S GM+CS EL + DD + I+ LP + VG + L+L D ++D+++TP+R Sbjct: 117 KTYGKTSHGMICSTDELGMGDDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIAVTPDRG 176 Query: 167 DCIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + A L++ +++ P ++ P++I D C F V Sbjct: 177 YCLSMRGVARETATAYGLPLRDPALLDVPAP-NAYGYPVQIS----DPIGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G++ +P WM++RL+ G+R IS VDITNYV L+ G P H +D +R+ + VRRA Sbjct: 232 GLQPEARSPIWMQRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRNRVDGPIGVRRAT 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN------TTDVLVEVA 336 GEK+ LD L +++VI + +AG++GG + D TT+V++E A Sbjct: 292 QGEKLTTLDGTVRVLDAEDLVITDNRGPIGLAGVMGGANTEIADADGEHALTTEVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +D I+IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 HFDAISIARTARRHKLSSEASKRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEIT 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + PR I + +++G++ E +R L+ +G V G+ D+ V+VPSWR D+ E Sbjct: 412 SPHAPRTIAMPANHPDQVAGVEYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLNEP 470 Query: 457 ADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EE++R+ G + + S P P + R L+ +Q R + R LA +E +++ F Sbjct: 471 NDLAEEVIRLEGYENLPSTLPTPPS----GRGLTDRQRLHRRIGRALAGSGYVEALSYPF 526 Query: 516 ISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I G +R ++++NPIS +RT+LLPGLL A RN R D A+F Sbjct: 527 IGDAVLDQLGLEADDARRRTVKLVNPISDKEPALRTTLLPGLLGALRRNDGRGSHDLALF 586 Query: 571 EVSHVYENDTPEGQKYMA--------------------------------AGIRKGSSGI 598 E V+ P G++ A AG R+ +G Sbjct: 587 ETGLVFR---PTGEEKQAVRLPVDRRPTDEEIAGLNAALPRQPRRAAVVLAGARE-QAGW 642 Query: 599 EGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G G W+D E R + A + VI +R + AP +HPGR + Sbjct: 643 WGKGTPATWADAVEA-ARLI----AAEAGVEVI--------VRADQHAP--WHPGRCAAL 687 Query: 657 KTSA---EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + E + G+ GE HP ++ L C EV LD + ++ + +S+ Sbjct: 688 YVNVNGEEALFGHAGELHPRVIKALHLPERTCAAEVELD---VLEQAVDGALQAPRISTF 744 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A +V +PA + ++ L++ + +FDVF G+ +G G KS+A + + Sbjct: 745 PVATQDVALVVAGDVPAADVEAALREGAGELLESLRLFDVFTGEQIGGGNKSLAYALRFR 804 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V ++T AVLR + Sbjct: 805 AADRTLTVEEASAARDSAVALAAERTGAVLRGA 837 >gi|325297902|ref|YP_004257819.1| Phenylalanyl-tRNA synthetase beta chain [Bacteroides salanitronis DSM 18170] gi|324317455|gb|ADY35346.1| Phenylalanyl-tRNA synthetase beta chain [Bacteroides salanitronis DSM 18170] Length = 820 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 250/834 (29%), Positives = 413/834 (49%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ E++ LTSIGLE +V+ + L I KVL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPEQVAAALTSIGLETGEVEEVQSIKGGLEGLVIGKVLTCESHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I +D G+ +Q+VCGA NV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVDLGQGDPVQIVCGASNVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP D G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTSHEGIIVLPDDVEPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + E + P + ++ L+I ++++ C +A VK V Sbjct: 181 GVARDLYAWLVQNGHEAELKRPSVEAFAVDNHDLDIDVVVENTEACPRYAGVVVKNVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +LKA+GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQAKLKAIGLRPINNIVDITNYILHAYGQPMHCFDADKIKGGKIVVKTVAEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E+ LS +++I + IAG+ GG +G + T +V E A + P + ++ Sbjct: 301 VTLDGVEHKLSDRDLMICNAEEPMCIAGVFGGLDSGTTEETRNVFFESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKI 404 + G+ TDS +RFERG+D G+I LK L L GG + C ++ P + Sbjct: 361 RRQGLSTDSSFRFERGIDPNGVIYALKEAAILAKELAGGEIA--CEIKDNYPSPIAGFPV 418 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEI 463 + V+ L G ++P E RI+ L + GE + + VP +R DV+ D+VE+I Sbjct: 419 ELPYAYVRSLIGKEIPAEVIKRIVSSLEMEITGETGEGLSLVVPPYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 LRIYG + ++ L + EDK ++ LQ V L E++N S S Sbjct: 479 LRIYGYNNVEIPTSVKACLSVEGAEDK-SVKLQN----LVSEQLVGCGFNEILNNSLTSA 533 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + E + ++NP+S D++ +R +LL G L++ N +R AD FE + Y Sbjct: 534 SYYEGLETYKPENLVRLMNPLSNDLNVLRGTLLFGGLESIEHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPE--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 + + +K +A + G+ +G+ S+ +++ KA L+++ V Sbjct: 594 HYNAGKRNPEKALAPYSEELHMGLWVTGKRVSNSWAHADEDSSVYELKAYVLNILRRLGV 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + +L F + + Y S + T +L G H +L F + N EVY Sbjct: 654 NFGALVFGTLSDDIYAAALS--VHTRGGKLLATLGILHKKLLKMFDIEN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K K V + +S VKRDLA ++D+ + + I D +L+ V + Sbjct: 707 LNWRELMKAVKNNAVTYKDISKYPAVKRDLALLLDKQVQFAEIEKIAYETDKKLLKRVEL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ +Q T D I LM+++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFTLQDENATLNDKQIDKLMNKLVQNLETKLGAKLR 820 >gi|229099020|ref|ZP_04229954.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-29] gi|228684248|gb|EEL38192.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-29] Length = 806 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 413/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L R L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVANQIAYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + + FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPESQKQLDVKDTFV-FELSLVKVFGADVEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYLPIPRFPSM---TRDMAVVVTKETKAGGMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|222100728|ref|YP_002535296.1| Phenylalanyl-tRNA synthetase beta chain [Thermotoga neapolitana DSM 4359] gi|221573118|gb|ACM23930.1| Phenylalanyl-tRNA synthetase beta chain [Thermotoga neapolitana DSM 4359] Length = 788 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 238/816 (29%), Positives = 423/816 (51%), Gaps = 54/816 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTI------VKVLSVER 54 M+ SWL++ +D D +E+I + LT G VE + L PF + +V+ + Sbjct: 1 MRVPESWLREFIDLDWDIEEIAERLTFSGTSVEDI-----LKPFNVSGKIVTARVVETFQ 55 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P D + R+D G+ VV V+ + A G+ + N + + R+ GI Sbjct: 56 HPKSDKLLVCRVDAGEKL-YTVVTADRTVKEEDYVILALEGATL-NNGVKIAPREFSGIV 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S + P G + + L + ++D+ +TPNR DC+ + G Sbjct: 114 SEGMLCSLEELGLEEKSDRVYRFPEPVTPGVNVIEEFGLDERVLDLEITPNRPDCLSILG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A +L A LK+ + E +P ++ ++D C + +KGV +P W Sbjct: 174 VARELSALSRRPLKKPSPRVSFVDEDVPFDVI--VEDVEGCPRYTARIMKGVTVKDSPLW 231 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 ++ RL A G+RS++ +VD TNYV L+ G+P H FD +R+ + + V+ A GE++L LD Sbjct: 232 LKARLVASGMRSLNNVVDATNYVMLELGHPVHAFDLARLGNARIVVKTASGGERVLLLDE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY++ V+I I ++ GI+GG +G +NT D+++EVA +DP+ I ++ K+LGI Sbjct: 292 KEYEMKGGEVLITDGENILALGGIMGGMESGVSENTRDLVLEVAYFDPVRIRKTSKSLGI 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI----VFMN 408 ++S YRFERGVD V + +I L GG + + + P+KI VF+ Sbjct: 352 SSESSYRFERGVDPNDADLVSLKLAEMIQKLAGG----VVLRKFWDVYPKKIEPKRVFLR 407 Query: 409 SE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 E VK++ GI+V E+ RILERL F V + +EV VP++R DVE + DL+EEI RI Sbjct: 408 KERVKKILGIEV--EEPDRILERLEFQVKSVENGYEVVVPTFRPDVEREIDLIEEIGRIN 465 Query: 468 GVDQIKSE--PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G ++I+ LP + R L++ + ++K E+V++SF++ E+ + Sbjct: 466 GYEKIEPRIISLPAVNIGWNRKQILRKEISHFMK----GMGFDEIVSFSFVNSEKVKKWP 521 Query: 526 GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 ++E + + NPIS+DM MR +L +++ N R + +FE+ +Y + G+ Sbjct: 522 VVRKEPIFLTNPISSDMDVMRYTLFHSMIQVLSENFKRQNRNLKLFEIGKIYYREN--GE 579 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FES 642 + + G+E ++DK R V + K V++ +R + Sbjct: 580 YREVETLSAVACGLENPDD-YTDK-----RKVSFYTMKG----VLDELFQRYGVRAEYRE 629 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + + P R+ I + + LG+ G P +LD + + FE+ L+S+ +R Sbjct: 630 AELTGFFPTRTARIFSEGK-ELGFLGMVDPKLLDEYDVKEETYFFEIDLESLAELVSERP 688 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 K + V+RD++F++ + + ++++ + + + L+++V VFDV++GK + EG Sbjct: 689 VYKPTPKFPA---VRRDVSFLLPRGFKSLEILDLFRKMGESLVEEVGVFDVYEGKGVPEG 745 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 SV V+ + + T D+++ + +R+V+ V +K Sbjct: 746 MVSVTFYVIFRHPERTLTDEEVNQIFERMVQRVEEK 781 >gi|16079915|ref|NP_390741.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221310804|ref|ZP_03592651.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. 168] gi|221315129|ref|ZP_03596934.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320047|ref|ZP_03601341.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. JH642] gi|221324329|ref|ZP_03605623.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. subtilis str. SMY] gi|3123292|sp|P17922|SYFB_BACSU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1770031|emb|CAA99564.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus subtilis] gi|2635328|emb|CAB14823.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus subtilis subsp. subtilis str. 168] Length = 804 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 239/824 (29%), Positives = 414/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGAEAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 NGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K P +SE I ++D + +K V Sbjct: 177 MNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE LS D++VI + + Q++AG++GG + ++T +L+E A ++ + ++ Sbjct: 297 VTLDDQERKLSADHLVITNGTKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 K+LG+ ++S RFE+G+D + + LI GG + ++T + I Sbjct: 357 KDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ + I +RLGF+V D V+VPS R D+ + DL+EE R+ Sbjct: 417 SADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + + +S +++++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL + N+ R A++EV V+ E DT Sbjct: 535 EKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + AG G +LW + + VD F K +++ LDS+ F Sbjct: 595 VETERVAGAVTGL----WRKQLWQGEK----KPVDFFVVKGIVEGLLDKLNVLDSIEFVQ 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + ++ G+ G+ HP++ + E Y+ + + Sbjct: 647 SERKQLHPGRTANILLNGSLI-GFIGQVHPSLEKELDIK------ETYVFELDLHALLAA 699 Query: 703 KTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +T +V+ + +P V RD+A + D+ + +G L ++IK +L+ +VTVFDV++G+ + Sbjct: 700 ETAPLVYTAIPKYPSVTRDIALVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQAVLR 803 >gi|295696875|ref|YP_003590113.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] gi|295412477|gb|ADG06969.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus tusciae DSM 2912] Length = 803 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 253/839 (30%), Positives = 422/839 (50%), Gaps = 72/839 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL++ +D D +S E++ + LT G+ VE V LS + +VL V +P+ Sbjct: 1 MKVSYRWLQEWIDLDDLSPEEVAELLTRHGVAVETVRQLNPGLSQVVVGEVLEVRPHPEG 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+D G+ +Q+VCGAPN GL A G+ +PE + V RG+ S GM Sbjct: 61 GRLRVCRVDVGRGDPLQIVCGAPNAAPGLRVPTALVGATLPETTIGEAV--FRGVASQGM 118 Query: 118 MCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KE L+ D + + LP D+P+G + D L D ++++ LTPNRSDC+ + Sbjct: 119 LCSAKEIGMEARLLPKDQTEGLYVLPPDSPIGKDIVDVLGWDDAVLELDLTPNRSDCLSM 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A +L A LK + + +E P ++ L+ + LC+ + ++G R +P Sbjct: 179 VGVAHELSAILDRPLKFPDWTEGGVAEG-PSPVRITLE-TPLCRRYMGQVIEGARQASSP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM+ RL A G+R I A+VD TNYV L+ G P H FD ++ + VR GE++ L Sbjct: 237 LWMQMRLLAAGIRPIDAIVDATNYVMLELGQPLHAFDFDQVQGGHIRVRAGQPGERLRTL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E L +VIA + R +AG++GG+++ +TT +++E A +DP+++ R+ ++L Sbjct: 297 DGVERTLDSSMIVIADEARAIGLAGVMGGENSEITASTTRIVLESAWFDPVSVRRTARHL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMNS 409 G+ +++ RFE+GV+ + + L I + GG + + ++ R KI Sbjct: 357 GLRSEAGLRFEKGVNPEVLPLALARASRFITAHAGGRLVGAPVDKGDLHEDRKKIALRPD 416 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V G+ V + RI ERLGFSV + ++V VPS R+D+ + DL EE+ R++G Sbjct: 417 KVNEWLGVKVEPGEMKRIFERLGFSVDRLDMRTWQVEVPSRRRDISREIDLAEEVARLHG 476 Query: 469 VDQIKSEPLPLTQVEDK---RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF- 524 D I P T E + +L Q ++R L EV W++ + SV+ Sbjct: 477 YDNI-----PATMPEGRVTAAGRTLSQRVRGTIRRFLTDLGFFEV--WTYTLQNPSVIGR 529 Query: 525 ---GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE---- 577 G Q L +L+P+S + + +RT+LLPGLL A NV R + AI+E+ V+ Sbjct: 530 LNEGRSQEYLAVLHPMSEERAALRTALLPGLLDAAAYNVRRDQREIAIYEIGRVFHPRGL 589 Query: 578 --NDTPEGQKYMAAGI--RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 D P+ ++ + A I R G GI GR D + AK A +V+E Sbjct: 590 PLADLPDEREQVGALILGRFGPHGIGWEGRP-----------ADFYAAKGVAAAVLERLG 638 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 V D F G HPGR+ I+ + + G+ G HP + + + + + + LD Sbjct: 639 VQAD---FVPGVREGLHPGRAAQIQVNGRKI-GWVGALHPEVEERWEIPK---AYYIELD 691 Query: 693 ------SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLID 745 S+P + R L + RDLA +V + A + I ++ ++ Sbjct: 692 MQDIVKSLPGATTYRP-------LPRYPGISRDLALLVPRERAAREVEAGIRESGGPWLE 744 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +V +FDV++G + G KS+A ++ + + T D+++ + R++ + +++ LRS Sbjct: 745 NVELFDVYEGAQVPPGFKSLAFRLSYRAEERTLTDEEVNDALRRLI-DTLRERGVQLRS 802 >gi|168490529|ref|ZP_02714672.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] gi|183574860|gb|EDT95388.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC0288-04] Length = 801 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 244/827 (29%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVRAARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YER-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK ++E + L+ Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG----ILEALFTRLGLQVTYT 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 A S HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 643 ATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIE 695 Query: 701 RTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ Sbjct: 696 GALQPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 755 KLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|229076062|ref|ZP_04209030.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock4-18] gi|228706925|gb|EEL59130.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock4-18] Length = 806 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 413/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA NV GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANVAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVANQIAYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + + FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPESQKQLDVKDTFV-FELSLVKVFGADVEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSPIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|239932320|ref|ZP_04689273.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces ghanaensis ATCC 14672] gi|291440684|ref|ZP_06580074.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces ghanaensis ATCC 14672] gi|291343579|gb|EFE70535.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces ghanaensis ATCC 14672] Length = 855 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 266/886 (30%), Positives = 431/886 (48%), Gaps = 113/886 (12%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE VD+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVDHLGADLKGPLVVGRVATIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI +CGA N VG V A PG+ +P + I RK Sbjct: 61 GFKKPIRFCTVDVGEANGTGEPQEI--ICGARNFAVGDKVVVALPGAVLPGDFQIAE-RK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP + +G + LEL D ++D+++TP+R Sbjct: 118 TYGRVSRGMICSSDELDMGDDGSKGIIVLPPETEIGKDAVELLELVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+++ D C F V Sbjct: 178 CLSMRGVARETAIAYGL-PLRDPALLDVPGP-NAFGYPVKVS----DPVGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D + + + VRRA Sbjct: 232 GLSPEARSPIWLKRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRNLVQGTIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK------HAGCDDNTTDVLVEVA 336 GEK+ LD + L P+++VI + +AG++GG H ++ +TDV++E A Sbjct: 292 PGEKLTTLDGVQRTLDPEDLVITDERGPIGLAGVMGGANTEIADHDATENASTDVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +D +++AR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 HFDAVSVARTARRHRLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEVV 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY----------------- 439 PR I R++G+ E +R L+ +G V+G Sbjct: 412 APTAPRTITIPVDHPDRVAGVAYGRETVVRRLQEVGCDVVGNTAAWNAPSGSGVREAGGK 471 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D+ V+VPSWR D+ + DL EE++R+ G + + P L + R L+ +Q R + Sbjct: 472 DELIVTVPSWRPDLTDPNDLAEEVIRLEGYENL---PSTLPRPPAGRGLTGRQRLHRRIG 528 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 R LA +E N+ FI+++ G +R +++ NP+S + +RTSLLPGLL Sbjct: 529 RALAGAGYVEAPNYPFIAEQVFDQLGLDADDPARRVVKLTNPLSDEEPALRTSLLPGLLG 588 Query: 555 ATGRNVDRAIADFAIFEVSHVY----ENDT----------------------PEGQKYMA 588 A RN R D A+FE V+ E T PE +++A Sbjct: 589 ALRRNDGRGSHDLALFETGLVFLPGEEQRTAVRLPVDRRPTDEELAGLNAALPEQPRHVA 648 Query: 589 ---AGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 AG R+ +G G GR W+D E R V +A A+ L G Sbjct: 649 VVLAGARE-QAGWWGKGRPADWADAVEA-ARTV-AREAGAE-------------LVVRKG 692 Query: 644 APSWYHPGRSGIIKTSA---EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +HPGR + +A E V+G+ GE HP +L GL C E+ LD++ ++ Sbjct: 693 RYGPWHPGRCAELVVTADGTEQVIGHAGELHPGVLKTLGLPARTCAMELDLDAL---EQV 749 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ-GKSL 758 T + +S+ +D+A +VD +PA + ++ L++ + +FDV++ + L Sbjct: 750 GDDTPQAPGISTFPVATQDVALVVDASVPASDVEAALREGAGELLESIRLFDVYENAEQL 809 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GEG+KS+A + + T D+ + V ++T AVLR Sbjct: 810 GEGRKSLAYALRFRAGDRTLTVDEASAARESAVALAGERTGAVLRG 855 >gi|229169286|ref|ZP_04296997.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH621] gi|228614181|gb|EEK71295.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH621] Length = 806 Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 234/823 (28%), Positives = 410/823 (49%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL + + + I P DA VG + L L+D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKFVAKEYADGIFIFPSDAEVGADALEILNLNDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L ++VI + + ++AG++GG + D T +VL+E A + + R+ K+L Sbjct: 300 DAQERTLQSHHLVITNGTKALAVAGVMGGADSEVDSETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D+I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DRI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E +G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-AIGFIGQLHPETEKQLDVKNTFV-FELSLAKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DV +FD+++G+ + E Sbjct: 706 TYYLAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVALFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|34539967|ref|NP_904446.1| phenylalanyl-tRNA synthetase subunit beta [Porphyromonas gingivalis W83] gi|41018265|sp|Q7MXR4|SYFB_PORGI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|34396278|gb|AAQ65345.1| phenylalanyl-tRNA synthetase, beta subunit [Porphyromonas gingivalis W83] Length = 819 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 256/840 (30%), Positives = 411/840 (48%), Gaps = 58/840 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + WL ++L +S ++I DTLTSIGLE VE+++ R L I VL+ E +P Sbjct: 1 MNISYKWLLEYLPCTLSPQEIADTLTSIGLETGGVEEIETIRGGLRGLVIGHVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D G +Q+VCGAPNV G V A G+ + E + KIRG+E Sbjct: 61 NSDHLHITTVDVGADAPLQIVCGAPNVAAGQKVVVATVGTTLYHGEEEFAIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+CSE E+ + + + LP DAPVG ++Y + SD I+V +TPNR D Sbjct: 121 SFGMICSEVEIGVGSSNDGTIVLPSDAPVGMPAAEYYHVESDYCIEVDITPNRVDATSHY 180 Query: 173 GIALDLVAA-------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A DL A+ KL E+N L ++ I I+ + D++ C + ++ + Sbjct: 181 GVARDLAASLKRNGVPAELKLPEVN----LPTDIIDSRIEVKVADATACPRYQGLVIRDI 236 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 +P W+R RL+A+GLR I+ +VDITNYV + G P H FD + I D + V+ G Sbjct: 237 TVGESPEWLRNRLQAIGLRPINNIVDITNYVLHEFGQPLHAFDLAFIKGDRVHVQTVAEG 296 Query: 285 EKILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + LD E L+ ++++I S+G +AG+ GG H+G + TTD+ +E A ++P + Sbjct: 297 TPFVTLDGVERKLTAEDLMICDSNGDPMCVAGVFGGLHSGVTEKTTDIFLESANFNPTMV 356 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 R+ + LG+ TDS +RFERG+D + L+ SLIL + GG + + KP Sbjct: 357 RRTARRLGLNTDSSFRFERGLDPERTDWALRRAASLILEIAGGHLGGMTDVYSNPLKPHL 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 I +V + G + E IL L + E D + VP +R DV D++EE Sbjct: 417 ISLSFEKVNSVIGRTIEPEMVRSILNSLEIRISKEEDGVMTLEVPRYRTDVTRDVDVIEE 476 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 I+RIYG +Q++ + + + V L E++N S + Sbjct: 477 IMRIYGYNQVELTGYIRASLGHETETDRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYYE 536 Query: 523 LFGGGQREL--EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--- 577 RE+ E++NP+S +++ MR +LL G L+ N+ R +FE Y Sbjct: 537 GLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLYLFEWGKCYRFHA 596 Query: 578 ----NDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVI 629 ++TP +AA GI G+ W+ E +F+ KA V+ Sbjct: 597 AKRTDETP-----LAAYAEDDRLGIWICGQRVHNSWAHPEEP----TSVFELKA----VV 643 Query: 630 EPFVSLDSLRFESGAPSWYHP-----GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 E L + E+GA + + +KT + +LG FG ++ F + P+ Sbjct: 644 EQV--LCRVGIETGAYTLKTADNDLYASAMEVKTRSGKLLGTFGTVSTELIKRFEIEQPV 701 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 E+ D++ +S+ R K + L VKRDLA ++D+ + + ++ + + +L Sbjct: 702 YFAELLWDAL-MSESARYKL-EARDLPRFPEVKRDLALLLDKAVSFAEIESLARGCEKKL 759 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V +FDV++GK+L GKKS A+ ++ + T D I +M +I + +K A LR Sbjct: 760 LRRVELFDVYEGKNLPAGKKSYAVSFFLRNDEKTLNDKQIEAIMAKIRTTLEQKLGAQLR 819 >gi|306833179|ref|ZP_07466309.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] gi|304424753|gb|EFM27889.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus bovis ATCC 700338] Length = 801 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 250/838 (29%), Positives = 419/838 (50%), Gaps = 72/838 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V E L+ + V+S E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTYELSEKMSTTGIEVEGVSTPSEGLTKLVVGHVVSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDEELRQIVCGAPNVTAGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP DA G + YL+L D I+++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDSIIPREFSDGIQILPEDAKPGDSIFPYLDLDDEIVELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ + + I + I +S + V+ V Sbjct: 180 VAHE-VAAIYGKEVHFPEKELKEVSKAAKDVINVAI-----ESDKVLTYKARVVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD ++ D + R A +GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLNKFEDNKIVARNARAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI + ++AG++GG+ DDN+ +V++E A++D +I ++ Sbjct: 294 VTLDGEERELIAEDLVITVADKPVALAGVMGGQATEIDDNSKNVVLEAAVFDGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 L + ++S RFE+G++ + L +++ L G + + P + V + Sbjct: 354 GRLNLRSESSSRFEKGINYATVAEALDFAAAMLTELADGDV--LAGSVEAGSVPTEAVEV 411 Query: 408 NSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 ++ + ++ G ++ D + +LGF + G+ D+F VSVP R D+ +ADLVEEI Sbjct: 412 STTLDYVNVRLGTELTYADIEDVFAKLGFGLSGKADEFTVSVPRRRWDIAIQADLVEEIA 471 Query: 465 RIYGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 RIYG D LP T E L+ Q R ++ + + E+V+++ + E++ Sbjct: 472 RIYGYDN-----LPTTLPEAAGTAGELTATQKLRRKMRSIAEGAGLTEIVSYALTTPEKA 526 Query: 522 VLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-- 578 F L E++ P+S + S +R +++ G+L NV R ++ AI+E+ V+E Sbjct: 527 TEFTLQPSNLTELMWPMSVERSVLRQNVISGMLDTVAYNVARKNSNVAIYEIGKVFEQKG 586 Query: 579 ----DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FV 633 + P A I SG + + + VD F AK ++E F Sbjct: 587 NPKEELPNEVNTFAFAI---------SGLVAEKDFQTKATPVDFFYAKG----IVEAIFA 633 Query: 634 SLD---SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 LD E G S HPGR+ I ++V G+ G+ HP + + E+ Sbjct: 634 KLDLTVDYVAEKGLASM-HPGRTASIYLDGQLV-GFVGQVHPQTAKNYNVPETYVA-ELN 690 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT-----LVNIIKNVDRLID 745 LD I + K V ++ V RD+A + +PA T L I + + Sbjct: 691 LD---IIEAAFHADKAFVEITKFPAVSRDIALL----LPAATTHKEILAAIESAKVKRLT 743 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+ +FDV+ G ++ EG KS+A + Q D D+++ MD+I + +V + A +R Sbjct: 744 DIKLFDVYAGANIAEGMKSMAYSLTFQNPNDNLTDEEVAKYMDKITKFLVDQLGAEVR 801 >gi|229062243|ref|ZP_04199565.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH603] gi|228717071|gb|EEL68750.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus AH603] Length = 806 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 236/826 (28%), Positives = 409/826 (49%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVELLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C I D G+ + +Q++CGA N+ GL A G+ +P N + K+RG S Sbjct: 61 DKLNKCLI---DIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEAS 116 Query: 115 TGMMCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+C+ +EL + + + I P DA VG + L L D ++++ LTPNR+DC Sbjct: 117 HGMVCALQELGIDGKFVAKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K I+ S+E I ++ + VK V+ Sbjct: 177 LNMLGVAYEVAAIYGREVKLPAINLQESAEKTADYISVSVEAKEENPLYIAKMVKNVKIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI Sbjct: 237 PSPMWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD QE L ++VI + + ++AG++GG + D T +VL+E A + + R+ Sbjct: 297 QTLDAQERTLQSHHLVITNGEKALAVAGVMGGADSEVDSETVNVLIESAYFAGQTVRRTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVF 406 K+LG+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 357 KDLGLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+ Sbjct: 417 TAEKVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRL 476 Query: 467 YGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 477 YGYDHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYM 533 Query: 526 GGQRELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----EN 578 E +N P+S + S +R SL+P LL+A NV R A++EV ++ Sbjct: 534 VEPNEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAG 593 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + P+ ++++ AG+ G + W + + VD F K + + + + Sbjct: 594 ELPKEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQI 644 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + HPGR+ I E +G+ G+ HP + N FE+ L + + Sbjct: 645 TYAPAKREGMHPGRTADIVLDGE-AIGFIGQLHPETEKQLDVKNTFV-FELSLAKVFGAD 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + T + S+ RD+A +V AG + +I L+ DV +FD+++G+ Sbjct: 703 AEETYYLAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVALFDLYEGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKS+A + + T D+++ +R++ V +K A LR Sbjct: 760 MEEGKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|226306777|ref|YP_002766737.1| phenylalanyl-tRNA synthetase beta chain [Rhodococcus erythropolis PR4] gi|226185894|dbj|BAH33998.1| phenylalanyl-tRNA synthetase beta chain [Rhodococcus erythropolis PR4] Length = 828 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 258/858 (30%), Positives = 422/858 (49%), Gaps = 84/858 (9%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVER 54 M+ SWL + L D +V+ E++ +GLEVE++D EA+ P + KV+S+ Sbjct: 1 MRVAQSWLTEILQRATPDWEVTPEELDAGFVRVGLEVEELDTLEAIDGPLVVGKVVSITE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I +++ G+ + +VCGA N G L V A PG+ +P + RK G Sbjct: 61 LTEFKKPIRFCQVEVGEPEPRGIVCGARNFNEGDLVVVALPGAVLP-GGFEIATRKTYGQ 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + D + I+ L P A G ++ L L D II++++TP+R C V Sbjct: 120 VSDGMICSVSELGIGKDHSGILVLEPGTAEPGADGNELLGLGDTIIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L A G ++ + P S + P E L+ S F M + G+ Sbjct: 180 RGLTREL-ACGF----DLEYADPASVPAHPAEGEAWPVRLEPESKASRFVMRKITGIDPQ 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA+ + L VRRA +GEK+ Sbjct: 235 AVSPWWLQRRLLLSGVRPISPAVDVTNYVMLELGQPLHAFDATSVQGDLVVRRAKAGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E L P++VVIA D + S+A ++GG TTD+L+E A WDP+ + ++ Sbjct: 295 TTLDDVERTLDPEDVVIADDSGVISLAAVMGGATTEVGTATTDILLEGATWDPLAVFKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + +++ RFER VD + + +L++ + GG + PR + M Sbjct: 355 RRHKLPSEASKRFERVVDPAIPLAAVDRAAALLVEIAGGRIEPVLTDVG-DVAPRAAIRM 413 Query: 408 NSEVK-RLSGIDVPIEDSLRILERLGFSV---IGE--YDKFEVSVPSWRQDVEEKADLVE 461 + ++ R++G+ P + R L ++G +V + E + + + PSWR D+ + ADLVE Sbjct: 414 DIDLPDRVAGVTYPNGTAARRLTQVGCNVEVGVSEEGHGQLVATPPSWRPDLVQPADLVE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G++QI S L R L+ Q R R V + +A +EV+ F+ Sbjct: 474 EVLRLEGLEQIPSV---LPAAPAGRGLTPSQRRKRTVSKAVAHAGYVEVLPPVFLPTNVF 530 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 ++G + ++LNP+ AD + T+LLPGLL+ RN R D +++ ++ V Sbjct: 531 DVWGLDADDPRRNTSKVLNPLEADRPELATTLLPGLLEILARNASRGQRDLSLYGIAQVV 590 Query: 577 --ENDT------------------------PEGQKYMAA---GIRKGSSGIEGSGRLWSD 607 DT P ++AA G+R+ SG G GR Sbjct: 591 LPGPDTKPVDALPVDRRPTDEQIANLIASLPAQPVHIAAVLSGLRE-PSGPWGPGR---- 645 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + D F A + V L + ++ +HPGR + +V G+ Sbjct: 646 ----QAEASDTFAAVRVIAAAAGVEVELRAAQYLP-----WHPGRCAEVVVDGNVV-GHA 695 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP +L+ GL C E+ LD++P+ + +S V +D+A +VD+ Sbjct: 696 GELHPAVLERAGLPARTCALEIDLDALPL-----VENLPAPRISPFPAVLQDVAVVVDRD 750 Query: 728 IPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 IPA + +++ L++D+ +FDVF+G+ +GEG+KS+A + + + T +D+ Sbjct: 751 IPAAKVQEALRSGGGELLEDIRLFDVFEGEQVGEGRKSLAFALRFRGVDRTLTEDEASAA 810 Query: 787 MDRIVENVVKKTNAVLRS 804 D VE K A +R Sbjct: 811 RDAAVEAASKAVGAQMRG 828 >gi|327459858|gb|EGF06198.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1057] Length = 801 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 241/823 (29%), Positives = 429/823 (52%), Gaps = 42/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMSG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + +S +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFPLVENEKQAADSLSVALETEKASY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++VI + ++AG++GG+ +T V++E A++D +I ++ Sbjct: 296 LDGEERDLEVSDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQTGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAIEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEEL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS- 646 I + + +G + + + VD F AK V+E + L E A S Sbjct: 593 PNEINSFAFAL--TGFVQEKDFQTKPVAVDFFYAKG----VVEALFTKLGLTAEYAANSK 646 Query: 647 --WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKRT 702 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 647 IKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQLQ 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGE 760 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G LG Sbjct: 700 PAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKLGV 758 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 759 GLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|229013761|ref|ZP_04170889.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus mycoides DSM 2048] gi|228747430|gb|EEL97305.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus mycoides DSM 2048] Length = 806 Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 234/823 (28%), Positives = 409/823 (49%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL + + + I P DA VG + L L+D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKFVAKEYADGIFIFPSDAEVGADALEILNLNDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L ++VI + + ++AG++GG + D T +VL+E A + + R+ K+L Sbjct: 300 DAQERTLQSHHLVITNGTKALAVAGVMGGADSEVDSETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E +G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-AIGFIGQLHPETEKQLDVKNTFV-FELSLAKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DV +FD+++G+ + E Sbjct: 706 TYYLAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVALFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|229105187|ref|ZP_04235836.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-28] gi|228678113|gb|EEL32341.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock3-28] Length = 806 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 235/823 (28%), Positives = 414/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTADYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + ++T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQDHHLVITNGTKALAVAGVMGGADSEVTNDTVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLMPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVANQIAYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + + FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPESQKQLDVKDTFV-FELSLVKVFSADVEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSPIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|311031390|ref|ZP_07709480.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus sp. m3-13] Length = 804 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 420/823 (51%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + +WLKD+++ D +S E + + +T G+EVE V+ + ++ + VL E++P+ Sbjct: 1 MLVSYNWLKDYVNIDDISAEDLAEKITRSGIEVEGVEVLNDGINGVVVGHVLEKEQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D GK + +Q+VCGA NV G A G+ +P N + K+RG ES GM Sbjct: 61 DKLNVCQVDLGKGETVQIVCGAKNVDKGQKVAVATVGAVLP-GNFKIKRAKLRGEESNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + S I P + VG +YL +D ++++ LTPNRSD + + Sbjct: 120 ICSLQELGIGSKLVAKEFSEGIFVFPNEVEVGTDALEYLNRNDKVMELGLTPNRSDALSM 179 Query: 172 RGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + V A LG+ +K + +SE I +++ S + VK V+ + Sbjct: 180 LGVAYE-VGAILGRDVKWPSTDYEANSEIASDYISVNVNASEDNPLYVAKVVKNVKIGPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA EKI Sbjct: 239 PLWMQGRLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEILVRRAHKDEKITT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L+ +++VI + ++AG++GG ++ +TT +L+E A ++ + + ++ K+ Sbjct: 299 LDDAERTLTEEHLVITNGSEPVALAGVMGGANSEVQSDTTTILLESAYFNGVTVRKASKD 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVFMN 408 G+ +++ R+E+G+D + V+L+ GG + N + +P + Sbjct: 359 HGLRSEASARYEKGIDPNRTHEAAERAVALMAEYAGGEVVGGSVEVNTLKVEPAVVTTTV 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ + G + + I +L F V + F V+VP+ R D+ + DLVEE+ R++G Sbjct: 419 EKINSVLGTSISAAEVKNIFTKLQFDVSEDNGSFTVTVPTRRGDITIEEDLVEEVARLFG 478 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D I + LP++ L+ Q++ R V+R L +++ + +S S E++ F Sbjct: 479 YDNIPT-TLPVSAATPGV-LTAYQAKRRKVRRYLEGAGLIQNITYSLTSDERAKQFALED 536 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT--PEG 583 + + + P+S + S +R SL+P LL+A N+ R++ A++E+ V+ ++D PE Sbjct: 537 GKAIRLAMPMSEERSTLRLSLVPHLLEALQHNIARSLQANAVYEIGSVFIGKDDAVLPEE 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ +A + LW + + VD F AK V + + + Sbjct: 597 KERLAGALTG----------LWQQHPWQGEKKAVDFFVAKGILEGVFSMLGVSEGITYTR 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + E + G+ G+ HP L+ L FE+ L ++ Sbjct: 647 SEKDGLHPGRTAEILLNGESI-GFIGQLHPEKLNELDLPETYV-FELSLTALLGESIGEI 704 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + + + S + RD+A +VD+ PAG L +IK L+ +V VFDV++G + Sbjct: 705 QYEAIPRFPS---ISRDIALVVDRETPAGELEAVIKTTGGSLLKEVQVFDVYEGDKIDSS 761 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KKSVA + + T D+++ + ++++ V +K AVLRS Sbjct: 762 KKSVAFALRYYHPEHTLTDEEVTKVHTKVLQAVEEKFEAVLRS 804 >gi|52081370|ref|YP_080161.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|52786745|ref|YP_092574.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus licheniformis ATCC 14580] gi|319647277|ref|ZP_08001499.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus sp. BT1B_CT2] gi|81384866|sp|Q65GD3|SYFB_BACLD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|52004581|gb|AAU24523.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus licheniformis ATCC 14580] gi|52349247|gb|AAU41881.1| PheT [Bacillus licheniformis ATCC 14580] gi|317390624|gb|EFV71429.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus sp. BT1B_CT2] Length = 804 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 235/826 (28%), Positives = 420/826 (50%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+++++ D ++ E + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLQEYVNLDGMTPEILAEKITRSGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G+ + +Q++CGAPNV G A G+ +P N + K+RG S Sbjct: 61 DKLNKCLV---DIGEEEPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEAS 116 Query: 115 TGMMCSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS +EL + + + I P DA G L L D ++++ LTPNR+D Sbjct: 117 NGMICSLQELGIQGKLVPKEYAEGIFVFPGDAETGADALQSLALDDAVLELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + + G+A + VAA LG+ +K + +E I ++D +A +K V+ Sbjct: 177 MNMLGVAYE-VAAILGREVKLPETAYQAGAEKAADYISVKIEDPEANPLYAAKIIKDVKI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P WM+ +L G+R + +VD+TN+V L+ G P H FD R S + +R+A E Sbjct: 236 GPSPLWMQTKLINAGIRPHNNVVDVTNFVLLEYGQPLHAFDYDRFGSKEVVIRKAYENET 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD QE L+ +++VI + Q++AG++GG + ++T VL+E A ++ + ++ Sbjct: 296 ITTLDEQERTLTTEHLVITNGSSPQAVAGVMGGAESEVREDTATVLLEAAYFNGQTVRKA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIV 405 K+LG+ ++S RFE+G+D + + LI GGT + + N + K I Sbjct: 356 SKDLGLRSESSVRFEKGIDPARVRLAAERAADLISRYAGGTVLEGTVEENHLDIKENVIR 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +V ++ G+ + E+ + I ERLGF+V + V+VPS R D+ + DL+EE+ R Sbjct: 416 LSVDKVTKVLGMSISKEEMVNIFERLGFAVEDAERELVVTVPSRRGDIAIEEDLIEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG D I S +T L+ Q + R V+R L + + + +S + +++ + Sbjct: 476 LYGYDNIPSTLPEVTGFAG--GLTPYQDKRRKVRRFLEGAGLSQAITYSLTNDKKATAYA 533 Query: 526 GGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + IL+ P+S + S +R SLLP LL + N+ R A +E+ V+ E+ Sbjct: 534 LEKSFKTILSLPMSEERSVLRHSLLPNLLDSVAYNLARQADSAAFYEIGSVFLKAEEHTK 593 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P ++++A + +G+ LW + + VD F K ++E + + F Sbjct: 594 PVEKEHVAGAV----TGL-WHKNLWQGEK----KPVDFFVVKGIVEGLLEKLGITEGIEF 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ I + +V G+ G+ HP++ LS+ Y+ + + + Sbjct: 645 AQSERKELHPGRTANILHNGSLV-GFIGQLHPSVEKELDLSD------TYVFELDLHELL 697 Query: 701 RTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 R ++ + + V RD+A +VD+ AG L ++IK + + +V VFDV++G+ Sbjct: 698 RLDVPEITYTPIPKYPSVTRDIALVVDKQTTAGQLEDVIKTAGGKWLKEVHVFDVYEGEH 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKSVA + + T ++++ + D++++ + K AVLR Sbjct: 758 MEEGKKSVAFSLQYLNPEQTLTEEEVTKVHDQVLKALEDKYQAVLR 803 >gi|83590585|ref|YP_430594.1| phenylalanyl-tRNA synthetase beta subunit [Moorella thermoacetica ATCC 39073] gi|91208120|sp|Q2RHN8|SYFB_MOOTA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83573499|gb|ABC20051.1| phenylalanyl-tRNA synthetase beta subunit [Moorella thermoacetica ATCC 39073] Length = 803 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 266/831 (32%), Positives = 414/831 (49%), Gaps = 55/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIV---KVLSVERNP 56 M+ WL+ ++D + ++ D LT GL VE V++ L+P F V K+ ++ +P Sbjct: 1 MRVPYKWLQQYVDVTLPPAELADKLTMAGLAVEGVED---LTPGFQKVVAGKIKTITPHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D D I +D G+ E+Q+V GAPNV G + A G+ +P I RG+ S Sbjct: 58 DADHLVICNVDAGR--ELQLVTGAPNVHEGQMVAVALEGARLPGGREIHRA-TFRGVVSE 114 Query: 116 GMMCSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL L +D I+ LP DA G ++ L L D ++ + LTPNR+DC+ Sbjct: 115 GMLCSAQELGLDVSLVSPEDREGIITLPPDASPGADAAEVLGLKDVVLVLELTPNRADCL 174 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCKGFAMCCVKGV 225 + G+A + VAA G I++ L E P EI ++ LC + V+GV Sbjct: 175 SILGVARE-VAAITGA--PIHLPATLPGEDGP-EITGLATVEITAPDLCARYVARLVQGV 230 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 R +P W++ L+A G+R I+ +VDITN++ L+ G P H FD + + VRRA G Sbjct: 231 RIGPSPAWLQAFLRAAGMRPINNVVDITNFIMLEMGQPLHAFDYDLLEGHRIIVRRAGPG 290 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EKI LD E +L P+ +VIA R ++AG++GG TT++L+E A +D +I Sbjct: 291 EKITTLDGVERELDPEMLVIADAARPVAVAGVMGGLATEVTPATTNILIESAHFDGASIR 350 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYK 400 R+ + LG+ +++ RFERGV+L+G L+ L GG + D + R + Sbjct: 351 RTSRRLGLRSEASTRFERGVNLEGAPAAADRAARLMAELAGGRVAPGRIDCYVKRR---Q 407 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P I V L G ++ +LERL V GE F+V+VP++R D+ + DLV Sbjct: 408 PVTIELRPERVNYLLGTELAPTTMKELLERLHLEVRGE-GPFQVTVPAYRGDLTGEIDLV 466 Query: 461 EEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK- 518 EEI R+YG ++I + P LT E + + Q + A+ + EV+ +SFI Sbjct: 467 EEIARLYGYNRIPVTLPGNLTAREKQ---APAQRWEEAGREAAAAAGLAEVITYSFIGPR 523 Query: 519 --EQSVLF--GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +Q L +R ++I NP+ + S MR SLLPGLL+ GRN R + AI+E+ Sbjct: 524 ALDQLRLPEDHPWRRTVKIQNPLREEQSIMRPSLLPGLLEVAGRNASRRVLPVAIYELGR 583 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 V+ P G + +R + + R W+ + E +D + K S+ Sbjct: 584 VF---IPAGSRRPGEPLRLAGLVMGTTPRGWNWPAGE----MDFYYLKGILESIFSRLRV 636 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 D S A + HPGR+ IK VLGY GE HP++L L C FE+ ++ Sbjct: 637 RDVSWEASNAYPFLHPGRAATIKAGTR-VLGYLGELHPDVLAAVELPARACAFELDWEA- 694 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 + + + L V+RDLA +V PA + +I+ L+ + +FDV+ Sbjct: 695 --AGDLALRVPRYEPLPRFPAVERDLAVVVPATTPAAAVAGVIREAGGELLRAIALFDVY 752 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G + EG KS+A ++ Q T D ++ +RI + ++ A LR Sbjct: 753 EGAPVPEGCKSLAYSLVYQLPDRTLTDAEVNAAQERIQRALEERLGASLRQ 803 >gi|291570936|dbj|BAI93208.1| phenylalanyl-tRNA synthetase beta subunit [Arthrospira platensis NIES-39] Length = 817 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 239/835 (28%), Positives = 425/835 (50%), Gaps = 49/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ +D +S E++ +TLT G EVE +++R + ++ K+ + +P+ D Sbjct: 1 MRISLNWLRELVDISISPEQLAETLTVAGFEVEDIEDRRTWADGVVLGKIAEIAPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +VCGAPN ++ A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGQSDRLNIVCGAPNAAADMIVAVATIGTYLPAIDLKLKKTKLRGVPSMGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L +S I +D PV G + + L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLSELGLEKESPGIHSFDLDEPVLGSDVRPLIGLDDVILDVTATANRADGLSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + A G LK + + L + P ++ DL +S C + + V+ +P+W+++ Sbjct: 181 VAALTGGSLKIPDAAGVLIGDQDPAGGLEIDLMESQACPTYIGGAIANVKIAPSPDWLKR 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL+A G+R I+ +VD+TNY+ L+ G P H FD R++++ + VR A + E + Sbjct: 241 RLQAAGIRPINNVVDVTNYILLEWGQPLHAFDRDRLTNLTGSQNLTIGVRFAKASESLKT 300 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q L N+VI ++ + ++AG++GG+ + TT++++E A++ P+ I RS + Sbjct: 301 LDGQTRQLQEQNLVITANDQPVALAGVMGGEDTEVHEGTTNLILEAAVFSPVAIRRSARV 360 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 GI T+S R+ERG++ + + + LI L GGTA+ A T + R ++ Sbjct: 361 QGIRTESSTRYERGINQAELALACRRAILLISELAGGTATVQKAASGAT-QMRMTQEVSL 419 Query: 410 EVKRLSGI--------DVPIEDSLR------ILERLGFSVI---GEYDKFEVSVPSWRQ- 451 + RL+ I D +E L+ IL LG GE + V+VP +RQ Sbjct: 420 SLDRLNAILGPLKRGEDTEVESYLQPPEVEGILNALGCGTSRQEGESVVWTVTVPPYRQR 479 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+E + DL+EE+ R+YG D+ S+ LP V L +++ R ++ + + E++ Sbjct: 480 DLEREIDLIEEVARLYGYDRF-SDTLPTQSVPGY--LPPEEAAKRDLRAAFRAAGLTELM 536 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++S + ++ G ++ I NP+ + S +RT +L GL+ A N++ E Sbjct: 537 HYSLVKQQ-------GDNQVVIANPLFVEYSALRTEMLSGLIDAFVFNLENGNGPLNGLE 589 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + ++ D G+ Y G G + S W + ++ + F+AK SV E Sbjct: 590 IGRIFRRD---GEVYHEEDAIAGVIGGDPSQGRWVNSGKDNA--MSWFEAKGVLESVWER 644 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 R ES A HPGR+ + + + LG FG+ HP I L + FE L Sbjct: 645 LSLSVEYRQESDA-KMLHPGRTATLWLNGD-RLGIFGQLHPQIQREKELPEAVYLFEFRL 702 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTV 749 + + + K+ S P RDLAF V+ + L +IK ++++ V + Sbjct: 703 SVLTAAITAKDYLKRPFQSYSTFPASDRDLAFFVEDSVSVADLQKTMIKTGGKILESVEL 762 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD ++GK++ E ++S+A +++ + T D+DI + +I + + K+ LRS Sbjct: 763 FDEYRGKNVPENQRSLAFRLVYRVGDRTLTDEDIEPIQQKIRDALAKEFQVTLRS 817 >gi|229492692|ref|ZP_04386493.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodococcus erythropolis SK121] gi|229320351|gb|EEN86171.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodococcus erythropolis SK121] Length = 828 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 258/858 (30%), Positives = 422/858 (49%), Gaps = 84/858 (9%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVER 54 M+ SWL + L D +V+ E++ +GLEVE++D EA+ P + KV+S+ Sbjct: 1 MRVAQSWLTEILQRATPDWEVTPEELDAGFVRVGLEVEELDTLEAIDGPLVVGKVVSITE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I +++ G+ + +VCGA N G L V A PG+ +P + RK G Sbjct: 61 LTEFKKPIRFCQVEVGEPEPRGIVCGARNFNEGDLVVVALPGAVLP-GGFEIATRKTYGQ 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + D + I+ L P A G ++ L L D II++++TP+R C V Sbjct: 120 VSDGMICSVSELGIGKDHSGILVLEPGTAEPGADGNELLGLGDTIIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L A G ++ + P S + P E L+ S F M + G+ Sbjct: 180 RGLTREL-ACGF----DLEYADPASVPAHPAEGEAWPVRLEPESKASRFVMRKITGIDPQ 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA+ + L VRRA +GEK+ Sbjct: 235 AVSPWWLQRRLLLSGVRPISPAVDVTNYVMLELGQPLHAFDATAVQGDLVVRRAKAGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E L P++VVIA D + S+A ++GG TTD+L+E A WDP+ + ++ Sbjct: 295 TTLDDVERTLDPEDVVIADDSGVISLAAVMGGATTEVGTATTDILLEGATWDPLAVFKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + +++ RFER VD + + +L++ + GG + PR + M Sbjct: 355 RRHKLPSEASKRFERVVDPAIPLAAVDRAAALLVEIAGGRIEPVLTDVG-DVAPRAAIRM 413 Query: 408 NSEVK-RLSGIDVPIEDSLRILERLGFSV---IGE--YDKFEVSVPSWRQDVEEKADLVE 461 + ++ R++G+ P + R L ++G +V + E + + + PSWR D+ + ADLVE Sbjct: 414 DIDLPDRVAGVTYPNGTAARRLTQVGCNVEVGVSEEGHGQLVATPPSWRPDLVQPADLVE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G++QI S L R L+ Q R R V + +A +EV+ F+ Sbjct: 474 EVLRLEGLEQIPSV---LPAAPAGRGLTPSQRRKRTVSKAVAHAGYVEVLPPVFLPTNVF 530 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 ++G + ++LNP+ AD + T+LLPGLL+ RN R D +++ ++ V Sbjct: 531 DVWGLDADDPRRNTSKVLNPLEADRPELATTLLPGLLEILARNASRGQRDLSLYGIAQVV 590 Query: 577 --ENDT------------------------PEGQKYMAA---GIRKGSSGIEGSGRLWSD 607 DT P ++AA G+R+ SG G GR Sbjct: 591 LPGPDTKPVDALPVDRRPTDEQIANLIASLPAQPVHIAAVLSGLRE-PSGPWGPGR---- 645 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + D F A + V L + ++ +HPGR + +V G+ Sbjct: 646 ----QAEASDTFAAVRVIAAAAGVEVELRAAQYLP-----WHPGRCAEVVVDGNVV-GHA 695 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP +L+ GL C E+ LD++P+ + +S V +D+A +VD+ Sbjct: 696 GELHPAVLERAGLPARTCALEIDLDALPL-----VENLPAPRISPFPAVLQDVAVVVDRD 750 Query: 728 IPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 IPA + +++ L++D+ +FDVF+G+ +GEG+KS+A + + + T +D+ Sbjct: 751 IPAAKVQEALRSGGGELLEDIRLFDVFEGEQVGEGRKSLAFALRFRGVDRTLTEDEASAA 810 Query: 787 MDRIVENVVKKTNAVLRS 804 D VE K A +R Sbjct: 811 RDAAVEAASKAVGAQMRG 828 >gi|328956932|ref|YP_004374318.1| phenylalanine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] gi|328673256|gb|AEB29302.1| phenylalanine--tRNA ligase subunit beta [Carnobacterium sp. 17-4] Length = 805 Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 233/822 (28%), Positives = 431/822 (52%), Gaps = 36/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WLK++LD + V+ E++ D ++ G+E+E V+ E L + + V +PD Sbjct: 1 MNASYQWLKEYLDLSKVTPEELADKMSRTGIEIEDVNIPETGLKKIVVGHAVKVVDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + Q+VCGAPN+ G + A PGS I N + K+RG S GM Sbjct: 61 DHLHVCQVDIGEEELSQIVCGAPNIAAGQKIIVALPGSRIT-GNAKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EL S+ + I LP DA G + YL + D I+++S+TPNR+D + + Sbjct: 120 VCSLAELGFSEKVIPKKYADGIYILPEDAVAGEPVFPYLAMDDAILELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 RG+A ++ A K K + S+S+ +K + ++ + + VK V+ + Sbjct: 180 RGVAHEVGAIYDQKPKFPSFELTEDESDSVENYLKVAVQNNEDAPSYNIRIVKDVKVAES 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ +L G+R ++ +VDITNY+ L+ G P H FD +++ S + VR+A GE + Sbjct: 240 PMWLQTKLMNAGIRPLNNVVDITNYILLEYGQPLHAFDYNQLQSKEIVVRQANDGEALTT 299 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E L+ +++VI + ++AG +GG + +D T V +E A+++PI++ ++ K Sbjct: 300 LDGEERSLTSEDIVITNGSIPVALAGTMGGLDSEIEDTTVTVAIEAAVFNPISVRKTAKR 359 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 + ++S RFE+G++L + H +LI L GGT ++++ K+V + Sbjct: 360 YNLRSESSSRFEKGINLSTITTAGDHAAALIAELAGGTVVAGTASQSVLEIKDKVVPITL 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + R G + IE+ I +RLGFSV+ + FEV++P R D+E +ADLVEE+ RI+G Sbjct: 420 NRINRSLGTSITIEEVKAIFDRLGFSVLEKEGLFEVAIPPRRWDIEIEADLVEEVARIFG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + S LP++ + L +Q R+ +R L + + +++ + E++ + + Sbjct: 480 YDNLPS-TLPISPAQPAA-LDNKQRLVRHTRRFLEGAGLSQAISYVLTTPEKATQYMMRE 537 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT----PEG 583 + ++ P+S D S +R +LL GLL N R + A++E+ V+ + P Sbjct: 538 SKATQLEMPMSEDRSTLRMNLLSGLLDDVSYNKARKNKNVALYEIGRVFYKEESQVLPIE 597 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 ++++A + +G L + + + VD F K +I + + + F + Sbjct: 598 EEHLAGVL---------TGSLLEKDWKGQPKKVDFFVLKGILEGLIASYGLTEDITFVAD 648 Query: 644 AP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ + E +G+ G+ HP + L + GFE+ L +I ++K+ T Sbjct: 649 KQRDGMHPGRTAAVFL-GEKEIGFAGQIHPLAAKAYEL-DETYGFELNLQAIVEAEKEST 706 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 + + + RD+A +VD+ I LV++I K + + +V +FD++QG+++ +G Sbjct: 707 VYEAIPKFPGM---TRDIALLVDEAITNQQLVDLIYKKGGKYLVNVRLFDIYQGENIEDG 763 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A + T ++++ D++ ++++ V+R Sbjct: 764 KKSMAYTLSYLNPTATMVEEEVSKAYDKVTSALIEEYQVVVR 805 >gi|307711347|ref|ZP_07647767.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] gi|307616863|gb|EFN96043.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis SK321] Length = 801 Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 423/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D V +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIAVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEETRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPENAVPGEEVFSYLDLDDEIIELSITPNRADALSMHG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K KE ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKEFTLTETNEAATDALSVGIETDKAPY---YATRILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A + EK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVREARADEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLDVNDLVITVADKPVALAGVMGGEATEISEKSSRVVLEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G D F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L+ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTATQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILEALFARLGLQVTYTATA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 + HPGR+ +I + VLG+ G+ HP + + E Y+ + +S + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAIEAAL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V ++ V RD+A ++ + + +++ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAAPFVEITKFPAVSRDVALLLKEEVTHQEVIDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 FGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|163942294|ref|YP_001647178.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus weihenstephanensis KBAB4] gi|163864491|gb|ABY45550.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus weihenstephanensis KBAB4] Length = 806 Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 234/823 (28%), Positives = 408/823 (49%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL + + + I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKFVAKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L ++VI + + ++AG++GG + D T +VL+E A + + R+ K+L Sbjct: 300 DAQERTLQSHHLVITNGTKALAVAGVMGGADSEVDSETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E +G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-AIGFIGQLHPETEKQLDVKNTFV-FELSLAKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DV +FD+++G+ + E Sbjct: 706 TYYLAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVALFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|329116520|ref|ZP_08245237.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] gi|326906925|gb|EGE53839.1| phenylalanine--tRNA ligase, beta subunit [Streptococcus parauberis NCFD 2020] Length = 801 Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 242/823 (29%), Positives = 426/823 (51%), Gaps = 42/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV ++ + +++ G+EVE V+ E LS + +LS E PD Sbjct: 1 MLVSYKWLKELVDIDVPSAELAEKMSTTGIEVEGVEVPSEGLSKLVVGNILSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDEPRQIVCGAPNVKAGIKVIVAIPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LSD S I LP +A G + L+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSDSIIPKEYSEGIQILPENAIPGESIFPVLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK KE+ S + + + + I+ D +A V+ V Sbjct: 180 VAHE-VAAIYGKTVAFPDKELVESNQEACDILEVTIETDK-----VLTYASRIVENVTIA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD + + R+A +GEK+ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFDGKKIIARQAKAGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E +L +++VI+ + + ++AG++GGK D+ + +V++E A++D ++ ++ Sbjct: 294 VTLDGEERELIEEDIVISVNNQAVALAGVMGGKATEIDNTSRNVVLEAAVFDGKSVRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV+ ++ L +++ L GT S A + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGVNYDTVLEALDFAAAMLTELANGTVLSGQIQAGQLPTEPVQVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D ++ +LGF + G + F VSVP R D+ +ADLVEEI RI Sbjct: 414 NLDYVNVRLGTELTYADIQQVFAQLGFGLNGSAENFTVSVPRRRWDISIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG E LP T E L+ Q R ++ + + EV+ ++ + +++ Sbjct: 474 YGY-----ENLPTTLPEAGGTAGELTKTQKLRRQIRTIAEGAGLNEVITYALTTPDKAKE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F L E++ P++ D S +R +++ G+L NV R + AI+E+ V+ + T Sbjct: 529 FTLEASNLTELMWPMTIDRSVLRQNMISGMLDTIAYNVARKNNNMAIYEIGKVF-HQTGN 587 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q+ + + + I G L +DK + + + VD F AK L V+ + L+ Sbjct: 588 PQEELPEEVNTFAFAISG---LIADKDFQTQAQPVDFFYAKG-ILEVMFEKLGLEVTYQA 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ + + + LG+ G+ HP + + + V L+ + + + Sbjct: 644 EKEMASMHPGRTARVYHNDHL-LGFVGQIHPQTASNYDVP---ATYVVELN-LTVVEGLL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGE 760 + + + V RD+A ++DQ + +++ I + + + V +FDV+ G SLGE Sbjct: 699 SDEYIFQEIPKIPAVSRDIALLLDQEVSHQAILDAITSAKVKFLKSVKLFDVYAGPSLGE 758 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q ++ +++ +++I + ++ NA +R Sbjct: 759 GKKSMAYSLTFQNPNESLTVEEVAKYIEKITNALTEQVNAEIR 801 >gi|328951291|ref|YP_004368626.1| Phenylalanyl-tRNA synthetase beta chain [Marinithermus hydrothermalis DSM 14884] gi|328451615|gb|AEB12516.1| Phenylalanyl-tRNA synthetase beta chain [Marinithermus hydrothermalis DSM 14884] Length = 779 Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 248/815 (30%), Positives = 398/815 (48%), Gaps = 66/815 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN-PDLD 59 M+ SWLK+ L E + L +GL VE V + A P + V+ R P+ Sbjct: 1 MRVPYSWLKEFLPDLPPPEDLEPILARLGLAVEAVHHIPAPPPGVVFGVVRAARPLPESA 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G Q + +V GAPN R G+ A PG+ +P+ + R+IRG+ S GM Sbjct: 61 LKVLEVDVGTRQ-VTMVSGAPNAREGIGVAAALPGTVLPDGTELAE-RRIRGVASYGMAL 118 Query: 120 SEKELMLSDDSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 S E+ + ++ELP DA P L + E + ++++ LTPNR+D V G+A D Sbjct: 119 SPLEMGVGSYGGGLLELPADALEPGTPLLQAWPE--EWVLELELTPNRADAASVLGVARD 176 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA LG L + + +E I + ++D+ C + +G++ +P ++R Sbjct: 177 LAAA-LG-LSLVLPEPEVRAEEIEFPVAVTVEDARGCDRYVARYARGLKIGPSPLGAQRR 234 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A GLR I+ +VD TNYV L+ G P H FD + + + VRRA GE ++ LD + L Sbjct: 235 LLAAGLRPINNVVDATNYVMLELGNPLHAFDRRAVGEGIVVRRAREGEALVTLDGERRAL 294 Query: 298 SPDNVVIASDGRIQS----IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +++VIA+ S IAG++GG ++ +TT++++EVA +DP++I R+ + LG+ Sbjct: 295 EAEDLVIAARAGGASTPIGIAGVMGGANSEVRPDTTEIILEVAHFDPVSIRRTARRLGLA 354 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMNSEVK 412 TD+ YRFERGVD + + L G + + + KPR + F S Sbjct: 355 TDASYRFERGVDPNLPPLAAERFLELAQQWAGAEVAAVGVDVG-GPKPRASVAFRPSYAN 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 RL G D E L +L RLG V G+ + + V P+WRQD+ + DLVEE+ R+ G D I Sbjct: 414 RLLGTDWAEEAQLEVLRRLGCEVEGQAEPYTVRPPTWRQDLAIEEDLVEEVARLVGYDAI 473 Query: 473 KSEPLP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 E LP D R ++ VLA EVVN++++ + L Sbjct: 474 P-EALPEFFPAPDNRGAEAPFLEKARLREVLAGLGFQEVVNYAWVDPGDLARARAPEPVL 532 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT--------P 581 + NP+ A +RT+L PGLL+ N RA + +FEV +V+ E +T P Sbjct: 533 RLKNPLDAQKDALRTALYPGLLRTVEAN--RAERNLLLFEVGNVFLEEEETHLALVLVGP 590 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +AG +G ++G L +A A L +++ Sbjct: 591 AIPPVWSAGFGEGFYALKG-----------------LLEAAATRLGA--------AIQVH 625 Query: 642 SGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + + HPG SG ++ AE+ G+ G+ HP I L + + E+ L P+ + + Sbjct: 626 PHSHAHLHPGISGTVLWNGAEV--GWIGQIHPEITAALELPS-VFAAELKL---PLPRAE 679 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLG 759 R T L RDLA +V + +P + ++K+ ++ + VFDV++G L Sbjct: 680 RPFTD----LPRFPAALRDLAVVVPEAVPYHEVATLLKDAAGAYLEGLEVFDVYRGAPLP 735 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 G+KS+A + + + T RD+++ M+RI++ V Sbjct: 736 AGQKSLAFHLSFRHPERTLRDEEVDAFMERIIQAV 770 >gi|325694190|gb|EGD36106.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK150] Length = 801 Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 241/824 (29%), Positives = 430/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + + LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPADGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVQFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG +T V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGAATEISGKSTRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPHRRWDIAIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFTFNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFEQ-TGNPKEEL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A S Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAASS 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G LG Sbjct: 699 QPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 758 VGLKSMAYSLTFQNPEASLTDEEVSKYMEKIEKSLTEKLGAEVR 801 >gi|291533699|emb|CBL06812.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Megamonas hypermegale ART12/1] Length = 811 Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 257/837 (30%), Positives = 421/837 (50%), Gaps = 61/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D + E++ D LT G+ VE V D E L ++ +E + + D Sbjct: 1 MQVSIKWLKDYIDFTETPEQLADKLTMAGIPVENVVDPGEGLEKVVTGRIEKLEPHQNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++ G + I +V GA NV G + A G+ +P N M ++ K+RG+ S GM+ Sbjct: 61 HLQICTMNVGLAENIIIVTGAQNVAEGQVVPVAMVGAHLP-NGMKISKGKLRGVASNGML 119 Query: 119 CSEKELML------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L + I LP D PVG D L L+D +++ LT NR+DC V Sbjct: 120 CSAQELKLDLEKLPEEQKTGIFILPSDTPVGIPAKDVLGLNDVVLEFELTANRADCFSVF 179 Query: 173 GIALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNN 228 G+ ++ A K EI ++ ++ L F ++ D LC F+ +K V+ Sbjct: 180 GLVREIAAITGNKPHFPEIKVN---EDDNTKLNDIFSVEIADPDLCSRFSTRMLKNVKIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P WM+QRL+ G+RSI+ +VD+TN+V ++ G+P H +D +I+ L RRA GE++ Sbjct: 237 PSPEWMQQRLEGAGIRSINNVVDVTNFVMIELGHPMHAYDYDKITGKKLIARRAIEGEEL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ + +VIA + +AGI+GG D TT V++E A + I R+ Sbjct: 297 HTLDDTSRKAKGEMLVIADSEKAAGLAGIMGGFETEITDTTTTVVLESADFYGPCIRRTA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK---I 404 + G+ +++ RFERGVD + I L L+ + T + + ++ P++ + Sbjct: 357 RACGLSSEASGRFERGVDSETTIKALDRAAQLLQEMGACTVCEGIV--DVYPNPKQANYV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEI 463 F ++ G ++ + L I+ +GF V E D+ V VPSWR DV AD+ EEI Sbjct: 415 TFTPEQINNHLGTNIAKDVMLNIITSVGFDVTKDENDEITVKVPSWRNDVTCMADISEEI 474 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R++G D+IKS LP V + S +Q+ VK L+S+ + E ++++ ++E Sbjct: 475 ARLHGFDKIKST-LP-NGVSMQGTQSAKQTFIDKVKASLSSQGLYETISFALTNEETFNK 532 Query: 524 FGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 Q + + I+NP+S + +RT+LL + RN+ R D A+FEV V+ Sbjct: 533 LNIPQDSPLRKAVPIMNPLSDEYPLVRTTLLSSIFDNLARNLARKNDDVALFEVGSVFFP 592 Query: 577 ----ENDTPEGQKYMAAGI--RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 + P+ +A I R+ + G W+ ++ VD +DAK +IE Sbjct: 593 KALPVTELPDEVVKIAGAITGRRNAQG-------WNQTND----MVDFYDAKG----IIE 637 Query: 631 PFVS-LDSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 ++ L R+ E+G HPG++ + K + V+ GE HP +L +G++ P+ F Sbjct: 638 ELLANLRVTRYTVEAGTHYAMHPGKTALFKKGRD-VIATVGEVHPTVLSAYGITKPVYIF 696 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDD 746 E LD+ I K K K L RDLA +VD + A + + K + + Sbjct: 697 E--LDAT-IVMKYMAKDLKYKALPKYPATSRDLAMLVDVDVNAADIEKAMTKAAGQNLTQ 753 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +T+FDV+ GK + EG+KS+A + Q T D +I +++IV + K NA LR Sbjct: 754 ITLFDVYTGKQVEEGQKSLAFSLTFQSNDKTLTDAEIDPAIEKIVAKLQKDFNANLR 810 >gi|229135392|ref|ZP_04264181.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST196] gi|228648088|gb|EEL04134.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus BDRD-ST196] Length = 806 Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 234/823 (28%), Positives = 408/823 (49%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL + + + I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKFVAKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGCEVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIQTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L ++VI + + ++AG++GG + D T +VL+E A + + R+ K+L Sbjct: 300 DAQERTLQSHHLVITNGTKALAVAGVMGGADSEVDSETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMIEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVANQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E +G+ G+ HP + N FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-AIGFIGQLHPETEKQLDVKNTFV-FELSLAKVFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V AG + +I L+ DV +FD+++G+ + E Sbjct: 706 TYYLAIPRFPSM---TRDMAVVVTTETKAGEMKQVIAEAGGELLKDVALFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMNYFDAERTLTDEEVTEAHNRVLTAVEEKFGAELR 805 >gi|221632657|ref|YP_002521878.1| phenylalanyl-tRNA synthetase subunit beta [Thermomicrobium roseum DSM 5159] gi|221156383|gb|ACM05510.1| phenylalanyl-tRNA synthetase, beta subunit [Thermomicrobium roseum DSM 5159] Length = 817 Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 274/846 (32%), Positives = 425/846 (50%), Gaps = 73/846 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPDLD 59 MK + WL++ + TD S E+I + LT GLEVE ++ A V V+ +E +P+ D Sbjct: 1 MKVPMRWLQELVATDRSAEEIAERLTLAGLEVESIERIGAHWDKIYVGVVEKIEPHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN------MIVNVRKIRGI 112 +L +D G H+ + VV GAPN+ VG A G+ + + + + + IRG+ Sbjct: 61 RLVLATVDAGAHR-LTVVTGAPNIAVGQKVALALAGATLYDGHSAEPRLITLKPATIRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CSEKEL LS++ I+ L DAPVG L DYL D I+++S+TPNR D + Sbjct: 120 RSEGMVCSEKELGLSEEHEGILVLDPDAPVGIPLRDYL--GDEILELSITPNRVDAYSIV 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDSSLCKGFAMCCVKGVRN 227 GIA ++ A L+ E P+++ D ++ S LC F ++G+R Sbjct: 178 GIAREVAALTNSPLR--------LPELAPIQVSVDPTLATVEASDLCHRFVGIALEGIRV 229 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W+R+RL+ VGLR I+ +VD+TNYV ++ G P H FD SR+ L VRRA GE+ Sbjct: 230 APSPWWLRRRLQLVGLRPINNVVDVTNYVMIEWGQPQHAFDRSRLRGGRLIVRRARPGEE 289 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD+ L+PD +VIA R IAG++GG + D TTDVL+E A +D ++I R+ Sbjct: 290 IETLDHVRRPLNPDMLVIADAERPVGIAGVMGGLESEISDETTDVLLETANFDMLSIRRT 349 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN--ITYKPRKI 404 + L + T++ RFERG+D P + V L LS+ T + + + + +P +I Sbjct: 350 ARTLRLRTEASARFERGLDPNLCWPAAQRAVQL-LSVLVPTCRVVAMVDHYPVPRRPWQI 408 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDVEEKADLV 460 F SE+ RL G+D P E + + E LG SV +D + V+VP++R D+ ADLV Sbjct: 409 RFPRSEIPRLLGVDYPDERVISVFESLGLSVERGWDNGRSVWLVTVPTYRSDITIPADLV 468 Query: 461 EEILRIYGVDQIKSEPLPLTQ---VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 EE R+ G D I E LP+ Q VE L L R ++ L + + EV+ + + Sbjct: 469 EEAARVIGYDTI-PERLPVGQTVPVEIDPELRL----VRQIQNGLVAAGLHEVITYPMVD 523 Query: 518 KEQ-SVLFGGGQRELEIL--------------NPISADMSNMRTSLLPGLLKATGRNVDR 562 + L G R E + NPI + S MR S+LP LL+ + Sbjct: 524 DQALMALTPSGDRLPERIGFFIRPTQEFVRARNPIRPEWSIMRPSMLPTLLRNAAEQLKF 583 Query: 563 AIADFAIFEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 A AIFE VY ++ P+ ++ + + +G+ L+ D+ R VD Sbjct: 584 NEA-VAIFETGKVYLPRQRDELPDERRVVGCLL----AGLATPRDLYQDE-----RPVDY 633 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 FD K L I P + + + F + PGRS I+ + G GE + + F Sbjct: 634 FDLKG-ILETILPRIGVADVAFCALTHPTLQPGRSAEIRARGRPI-GVLGEVLVTVTERF 691 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 G+ P V IP + V +S PV +D A +VD+ +PA + I+ Sbjct: 692 GIP-PQTRVVVAEIDIPAILEIGLAPISVRPVSRYQPVDQDFAIVVDESVPAADVAAAIR 750 Query: 739 NVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L ++ +FDV++G ++ GKKS+A +V+ +++++ L +RI + V ++ Sbjct: 751 AAAGPLATEIRLFDVYRGPAIPPGKKSLAFRVIFSAPDRPLSEEELQRLRERIEQQVRRR 810 Query: 798 TNAVLR 803 R Sbjct: 811 VKGEFR 816 >gi|325687867|gb|EGD29887.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK72] Length = 801 Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 431/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNIGAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIGPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++VI + ++AG++GG+ + ++ V++E A++D +I ++ Sbjct: 296 LDGEERDLEVSDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F V+VP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVNVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGVGLTEIITYALTTPEKAIEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEEL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A S Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAASS 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S Q++ Sbjct: 646 QIKNLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIQEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G LG Sbjct: 699 QPEQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++++K A +R Sbjct: 758 VGLKSMAYSLTFQNTESSLTDEEVAKYMEKIEKSLIEKLGAEVR 801 >gi|319651784|ref|ZP_08005910.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] gi|317396603|gb|EFV77315.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. 2_A_57_CT2] Length = 804 Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 237/827 (28%), Positives = 419/827 (50%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D + V+ ++ + +T G+EVE V+ E + + VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLSGVTPAELAEKITKSGIEVEGVEVLNEGIKGVVVGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + DTG + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DTGAGEPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKRAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P D VG + L D I+++ LTPNRSDC Sbjct: 117 NGMICSLQELGIESKLIAKEYAEGIYVFPNDTEVGQDALEQLNRDDQILELGLTPNRSDC 176 Query: 169 IGVRGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKG 224 + + G+A + VAA LG KL E S +E++ + +D+ L + VK Sbjct: 177 LSMLGVAYE-VAAILGRGVKLPEPQAETSSEKASDYIEVQVEAKEDNPL---YVAKVVKN 232 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 + +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VR+A Sbjct: 233 AKIGPSPVWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKQILVRKARD 292 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE I+ LD+ + +L+ D+++I + ++AG++GG ++ +T +VL+E A + + Sbjct: 293 GEVIVTLDDAKRELTSDHLLITNGSEPIALAGVMGGANSEVQSDTKNVLIESAYFKGATV 352 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPR 402 ++ K+ G+ +++ RFE+GVD + + V L+ GG + + A + +P Sbjct: 353 RKASKDHGLRSEASARFEKGVDPNRVRAAAERAVQLLAQYAGGEVLEGSVEADALQVEPA 412 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + ++ + G ++ +++ I RL F + D V+VP+ R D+ + DL+EE Sbjct: 413 VVSVTLEKINHVLGTELSMKEVEDIFARLQFETNTDNDTITVTVPTRRGDITIEEDLIEE 472 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + R++G D + S LP+ +LS Q++ R V+R L + + V +S ++ ++ Sbjct: 473 VGRLFGYDNLAS-TLPVGS-STPGHLSEYQNKRRMVRRYLEGAGLYQAVTYSLTNEAKAT 530 Query: 523 LFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----E 577 + +R+ +++ P+S D S +R S++P LL+ N R A++E V+ E Sbjct: 531 QYALEERKPVQLAMPMSEDRSLLRLSIVPQLLEVLKYNSARQNDSLAVYETGAVFLSNGE 590 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 D PE ++++A + +G S + + VD + K + + D Sbjct: 591 EDLPEEREHLAGAV---------TGLWHSHPWQGEKKPVDFYAVKGVLEGLFDKLGLSDK 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 F HPGR+ + S + V G+ G+ HP + L FE+ L +I Sbjct: 642 AEFRQAQKDGMHPGRTAEVLLSGKSV-GFVGQIHPTVEKELDLKETYA-FELSLKAILDE 699 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 + + + + S + RD+A + D+ AG L IIK +L+ DV VFD+++G+ Sbjct: 700 EVSPLQYEAIPRFPS---ITRDIALVADKGTAAGELEGIIKEAGGKLLKDVHVFDLYEGE 756 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + GKKS+A + + T D+D+ D++++ V +K AVLR Sbjct: 757 RMEPGKKSIAFSLKYFDPERTLTDEDVTKAHDKVLDAVKEKAGAVLR 803 >gi|292670664|ref|ZP_06604090.1| phenylalanyl-tRNA synthetase [Selenomonas noxia ATCC 43541] gi|292647691|gb|EFF65663.1| phenylalanyl-tRNA synthetase [Selenomonas noxia ATCC 43541] Length = 810 Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 252/835 (30%), Positives = 409/835 (48%), Gaps = 57/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++D D + E+I D LT G+ VE+ V E L ++ + +PD D Sbjct: 1 MQVSIKWLKDYVDIDETAEEIADRLTMAGVPVERIVRADEGLEKVITGRIEKIVPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ +Q+V GA NVR G + A GS +P+ I + K+RGI S GMM Sbjct: 61 HLLICQLNIGRDDLLQIVTGASNVREGHVVPVALVGSILPDGKKI-SKGKLRGIPSNGMM 119 Query: 119 CSEKELM-----LSDDS-ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D+ I LP D PVG ++ L L D +++ LT NR+DC V Sbjct: 120 CSAGELAIDIEGLPDEQIHGIYILPDDTPVGIPAAEALGLDDVVLEFELTANRADCFSVI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A +L I ++E + + + D+ LC+ F+ ++ V+ +P Sbjct: 180 GIAREIAALTGKELHLPKIEVGETAEDNASDLVTIQIADADLCRRFSARVLRDVKIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 W+ RL G+RSI+ +VD+TN+V L+ G P H +D ++ +LT RRA +GE + L Sbjct: 240 AWIVDRLHGAGIRSINNVVDVTNFVMLELGQPLHAYDYDAVAGHILTARRAHAGENLHTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ D +VIA + +AGI+GG + D TT V++E A + I R+ + + Sbjct: 300 DDSARTAVGDELVIADSEKPAGLAGIMGGLESEITDGTTSVILEAAAFHGPTIRRTARRI 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVF 406 G+ +++ RFERGVD + L+ + T + DI R + P + F Sbjct: 360 GLHSEASGRFERGVDETETVRAATRAAQLLAEMGACTVAKGVVDIYPTRRV---PTVLEF 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILR 465 V G ++P + L LGF V + + + V+VPSWR DV D+ EE+ R Sbjct: 417 SARTVGERIGANIPGDWMASALRSLGFIVEEKALETYRVAVPSWRGDVTMMEDISEEVAR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I S LP+ V+ R S Q ++ L + M E +++SF S++ G Sbjct: 477 FYGYDNIASR-LPMGAVQQGRT-SEMQDFVDAMRESLCALGMTEELSFSFTSEKTLDKLG 534 Query: 526 GG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 ++ + I+NP++ + +RT+LL +L+ RNV R D +F+++ V+ Sbjct: 535 VPPDSPLRQAIPIMNPLTDEYPLIRTTLLTSMLENAARNVARKNTDLRLFDIAPVF---F 591 Query: 581 PEG--------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 P+ +K AG+ G S W ++ VD +D K ++E F Sbjct: 592 PKALPVTELVHEKLKIAGLITGRR----SPIAWDTSND----LVDFYDMKG----IVERF 639 Query: 633 ---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + E G HPG++ K + V+ GE HP I FG++ + FE Sbjct: 640 LAAIGVQKYTVERGEHFALHPGKTAFFKKGRD-VIAVVGELHPTIAANFGIAQNVYIFE- 697 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVT 748 +D+ + + +R KT + L RDLA +VD + + +I KN + T Sbjct: 698 -MDAETLLRYRRKKT-VIAALPKYPASTRDLAILVDADLTTSEIDRVIAKNGGKFFRSAT 755 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FD++ GK + EGKKS+A + Q T D+++ I+ ++ +A LR Sbjct: 756 LFDIYMGKQVAEGKKSMAFHLYFQSDDKTLTDEEVDAAFSDILRAAEEQLHAQLR 810 >gi|160884270|ref|ZP_02065273.1| hypothetical protein BACOVA_02248 [Bacteroides ovatus ATCC 8483] gi|293370163|ref|ZP_06616723.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides ovatus SD CMC 3f] gi|156110009|gb|EDO11754.1| hypothetical protein BACOVA_02248 [Bacteroides ovatus ATCC 8483] gi|292634660|gb|EFF53189.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides ovatus SD CMC 3f] Length = 820 Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 247/834 (29%), Positives = 422/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPENAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG+D +I LK ++ L GGT S T P IV + Sbjct: 361 RRHGLNTDASFRFERGIDPNSVIYCLKLAALMVKELAGGTISSEIKDVFTTPAPDFIVDL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 E V L G +P+E I+ L + E + ++VP +R DV+ D++E+ILR Sbjct: 421 AYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISKEQS 521 IYG + ++ +P T + + ++ ++ ++A + E++N S ++ Sbjct: 481 IYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGMETYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 + D +K +A G+ +G+ S+ +++ KA ++++ + Sbjct: 594 HFDADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L +L + + S I T L FG +L F + N EVY Sbjct: 654 DLHNLVVGNLTDDIFAAALS--INTKGGKRLASFGIVTKKLLKAFDIDN-----EVYFAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ K+ + +S VKRDLA ++D+++ + I + +L+ +V + Sbjct: 707 LNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYETEKKLLKEVEL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|157150935|ref|YP_001450160.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus gordonii str. Challis substr. CH1] gi|157075729|gb|ABV10412.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus gordonii str. Challis substr. CH1] Length = 865 Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 241/823 (29%), Positives = 427/823 (51%), Gaps = 42/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + + LS + +V+S E PD Sbjct: 65 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPADGLSKIVVGEVVSCEDIPDTH 124 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPN+R G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 125 LHVCQVNVGEEENRQIVCGAPNIRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 183 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 184 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 243 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 244 VAHE-VAAIYDKSVQFKDFPLVEDEKQAADSLSVALETEKAPY---YAARILENVTIAPS 299 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 300 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 359 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +T V++E A++D +I ++ Sbjct: 360 LDGEERELEVSDLVITVADKPVALAGVMGGQATEISGKSTRVVLEAAVFDGKSIRKTSGR 419 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G++L + L S+I L G T + I A ++ ++V Sbjct: 420 LNLRSESSSRFEKGINLATVNEALDAAASMIADLAGATVRAGIVSAGSLDISDVEVVSSL 479 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 480 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGSAEQFTVSVPRRRWDISIEADLYEEIARIYG 539 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 540 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFTLNP 597 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 598 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEEL 656 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 I S +G + + + VD F AK V+E + L E A S Sbjct: 657 PNEIN--SFAFAFTGLVNEKDFQTQPVAVDFFYAKG----VVEALFAKLGLTAEYAASSQ 710 Query: 648 ---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKRT 702 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 711 IKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQLQ 763 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGE 760 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G LG Sbjct: 764 PAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKLGV 822 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 823 GLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 865 >gi|331701539|ref|YP_004398498.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus buchneri NRRL B-30929] gi|329128882|gb|AEB73435.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus buchneri NRRL B-30929] Length = 803 Score = 330 bits (845), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 240/831 (28%), Positives = 426/831 (51%), Gaps = 56/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MK + WLK +LD ++ + + + + +EV+ V E L + +LS+ ++P+ D Sbjct: 1 MKVSYKWLKQYLDLNMPAKDLAEKIERTAVEVDSVTVAEDGLKKLVVGHILSMTKHPESD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV V + A P S I N+ + K+RGIES+GM+ Sbjct: 61 HLHVCQVDVGEDEPLQIVCGAPNVDVDQKVIVALPNSRIG-GNVKIKRSKMRGIESSGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ E+ S D + I D PVG + YL + DPIID+ +TPNR D + + Sbjct: 120 CALDEIGFSKDVIPKEWADGIYVFDDDVPVGEPIYKYLGMDDPIIDLDVTPNRGDMLSIL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNN 228 G DL A ++ I P+ E L EI+ DD L K + + V+GV+ Sbjct: 180 GTVHDLAAI---YNQQPEIKKPVVDEDSSLDANQEIQAKADDQ-LAKTYKLRVVEGVKIA 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P+W++ L G+R I+ +VD+TNY+ L G P H FD +I+ + VR A GEK+ Sbjct: 236 PSPSWLQIVLWNAGIRPINNVVDVTNYILLKYGQPLHSFDKDKINGNVNVRLAQKGEKLT 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E++LS D++VIA D + ++AG++GG + DDNT++V++E A++D I ++ + Sbjct: 296 TLDEDEHELSADDIVIADDDKPIALAGVMGGFNTQIDDNTSNVVIESAIFDSFKIRKTAQ 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 + +++ RFERG++ G+ + VS+I L GG + + + + +++ Sbjct: 356 RHNLHSEASQRFERGINPDGVQDAVDEAVSMIKQLAGGKLAKGTVTASEYHPKLPTIYIT 415 Query: 409 SE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +E + G + + I +RLGFS D V++P+ R D+ ADL EE+ RIY Sbjct: 416 AERTNHVLGTSLTTAEIKSIFDRLGFSSEAHDDGLNVTIPARRWDIFRDADLYEEVARIY 475 Query: 468 GVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G D LP T +++ L+ Q R + L + + +++S + +++ +F Sbjct: 476 GYDN-----LPATLPTGRQSIGVLTPIQKLQRASRTALEGLGLTQAISYSLTTAKKAKMF 530 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--- 580 +E ++L P++ D + +R ++L GLL N + D A++E V+ D+ Sbjct: 531 LMRDSQETKLLWPMTQDHAVLRMNMLSGLLDDVAYNHAHKVDDVALYESGRVFYKDSADQ 590 Query: 581 --PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 PE +++ AG+ G+ + LW++ + VD F K ++ F+ + Sbjct: 591 IRPEEVEHI-AGVVTGNF----TDPLWNN----HVKPVDFFQLKG----IVNQFLVNLGV 637 Query: 639 R--FESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + E A Y HPGR+ I V G+ G+ HP I F + GFE+ + Sbjct: 638 KGDIEYTATDQYPEMHPGRTANISIHGHYV-GFLGQIHPRIAKQFKIKE-TYGFELNMQE 695 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDV 752 + K + + + S +KRD++ +VDQ + ++ ++ K ++DV +FDV Sbjct: 696 LIDLPKDDNQYQAISKYPS---IKRDISLVVDQDVTNSQILAVMNKRGGAFLNDVRLFDV 752 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G ++ +GKKS+A + ++T +D+ + ++I + + NA +R Sbjct: 753 YEGDNVPDGKKSMAYSLTYVDPRETLKDEVVNTAFEKIKKRLTADLNAEIR 803 >gi|260590751|ref|ZP_05856209.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella veroralis F0319] gi|260537237|gb|EEX19854.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella veroralis F0319] Length = 822 Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 242/834 (29%), Positives = 415/834 (49%), Gaps = 43/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLK+++D D++ ++ D LTS GLEV+ ++ R L + KVL+ E +P Sbjct: 1 MKISYKWLKEYVDFDLTPQETADALTSTGLEVDALEEVETIRGGLKGLFVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + +++ ++K +RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDDDKEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DAPVG ++Y L SD +ID+ +T NR+D + Sbjct: 121 SLGMICAEDEIGVGTAHDGIIVLPEDAPVGQPAAEYYHLDSDWLIDIDITANRADALSHC 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + + +P+E+ +++ C+ +A + Sbjct: 181 GVARDLYAWLTQNGYKTSLHRPNCDAFVVDNHDLPIEVT--IENPEACRRYACLSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G+ Sbjct: 239 VKESPQWLKDKLNVIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKDNNEGK 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I ++ IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHILGEHDLAICNEEEPMCIAGVFGGKGSGTYETTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TD+ +RFERG+D G+I LK L L GG S T V Sbjct: 359 SARRHGLSTDASFRFERGIDPNGVIYALKQAAILCKELAGGKISMEIRDEYPTKMSDFPV 418 Query: 406 FMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 +N E RL G + + RI E L V+ E + ++ VP++R DV+ D+VE+I Sbjct: 419 RLNYEYCDRLIGKRLGNDVIKRIAESLEMKVVKEDAEGLDLLVPAYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--SKEQS 521 LRIYG + ++ + + + + + + L +E++N S S + Sbjct: 479 LRIYGYNNVEIPTTLKSSLTIAEDADKEYHKENIIGEQLVGEGFLEIMNNSLTKASYYEE 538 Query: 522 VLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-- 577 F + ++++NP+SAD+ MR +LL G L++ RNV+R + FEV +VY+ Sbjct: 539 TGFNAYPWEETVKVMNPLSADLGVMRQTLLFGGLESIVRNVNRKAQNLRFFEVGNVYKYV 598 Query: 578 -----NDTPEGQKYMAAGIRKGSSG--IEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 ++P I +G I+GS W+ E+ ++ KA +++ Sbjct: 599 KEKWSEESPVKAYVQDHHIALWVTGKHIQGS---WAHPDEDS----SFYELKAYVENILR 651 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 L + + + ++ ++KT A L G + +L F + + + Sbjct: 652 RIGVPQGLLVCTNSDNNAFD-KALVLKTRAGKALVEMGIVNHKVLKSFDIEQKV--YYAE 708 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 LD + + R + +S V RDLA +VD ++ + I D + + V + Sbjct: 709 LDWTGLMKATRKNKLQFHEISKYPAVSRDLALLVDNNVEFAQIEEIAHQTDKKQLKRVEL 768 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV+QGK+L EGKKS A+ ++Q T D I +M ++++N+ K A LR Sbjct: 769 FDVYQGKNLPEGKKSYAVNFILQDETKTLNDKAIDAIMQKLIKNLTNKLGAELR 822 >gi|40054|emb|CAA37225.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] Length = 804 Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 238/824 (28%), Positives = 413/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLKGMDPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G +Q++CGAPNV G A G+ +P N + +RG ES Sbjct: 61 DKLNKCLV---DIGAEAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKANVRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 NGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGSDALAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K P +SE I ++D + +K V Sbjct: 177 MNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYISVKIEDQEANPLYTAKIIKNVTIA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENEMI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE LS D++VI + + Q++AG++GG + ++T +L+E A ++ + ++ Sbjct: 297 VTLDDQERKLSADHLVITNGTKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQKVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 K+LG+ ++S RFE+G+D + + LI GG + ++T + I Sbjct: 357 KDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLAGTVEEDHLTIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ + I +RLGF+V D V+VPS R D+ + DL+EE R+ Sbjct: 417 SADKVSSVLGLTISKEELISIYKRLGFTVGEADDLLVVTVPSRRGDITIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + + +S +++++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKATAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL + N+ R A++EV V+ E DT Sbjct: 535 EKSLNTVLALPMSEERSILRHSLVPNLLDSVSYNLARQTDSVALYEVGSVFLTKEEDTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + AG G +LW + + VD F K +++ LDS+ F Sbjct: 595 VETERVAGAVTGL----WRKQLWQGEK----KPVDFFVVKGIVEGLLDKLNVLDSIEFVQ 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + ++ G+ G+ HP++ + E Y+ + + Sbjct: 647 SERKQLHPGRTANILLNGSLI-GFIGQVHPSLEKELDIK------ETYVFELDLHALLAA 699 Query: 703 KTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 +T +V+ + +P V RD+A + D+ + +G L ++IK +L+ +VTVFDV++G+ + Sbjct: 700 ETAPLVYTAIPKYPSVTRDIALVTDKTVTSGQLESVIKEAGGKLLKEVTVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQAVLR 803 >gi|294791508|ref|ZP_06756665.1| phenylalanyl-tRNA synthetase, beta subunit [Scardovia inopinata F0304] gi|294457979|gb|EFG26333.1| phenylalanyl-tRNA synthetase, beta subunit [Scardovia inopinata F0304] Length = 868 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 260/871 (29%), Positives = 408/871 (46%), Gaps = 77/871 (8%) Query: 5 LSWLKDHL--DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+ + + ++ L +GLE E + + P + V + + P + Sbjct: 4 MGWLREHVAVPKEETYSQLAADLVKVGLEEEAIHQSDVTGPIVVGYVQDLVKEPQKNGKT 63 Query: 63 L---RIDTGKH-------QEI--QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + ID G + Q + +VCGAPN+ G V A PG+ +P N + RK Sbjct: 64 ISWCHIDLGPYNGQDENGQPVPRSIVCGAPNIAQGQKVVVALPGAVLP-GNFTIEPRKTY 122 Query: 111 GIESTGMMCSEKELMLSDDSASIMELP---------IDAPVGGRLSDYLELSDPIIDVSL 161 G S GM S +EL LS+D I+ L G L + L L +P++++++ Sbjct: 123 GHLSEGMCASARELGLSNDHTGIIVLGDYGLSPDQYESLKPGDDLMEILGLGEPVLEINI 182 Query: 162 TPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSSESIPLEIKFDLDDS------ 211 TP+R RG+A + AA +K ++ + P DLD + Sbjct: 183 TPDRGYAFSYRGVAREFHHSTGAAFRDPVKALDKAAPRLVRGAGTGPGRDLDVAVEDGNP 242 Query: 212 ----SLCKGFAMCCVKGVRNN-VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 S C + + V+GV N+ P+WM +RL+ G+RS+S LVD+TNYV LD G P H Sbjct: 243 IHGVSGCDRYYLRAVRGVDNSRQTPSWMARRLQRSGMRSLSPLVDVTNYVMLDLGQPLHA 302 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D +I+ + VRRA GE + LD ++++LS +++VI RI IAG++GG Sbjct: 303 YDLDKIAPPIVVRRAQQGEHLTTLDGKDHELSVEDLVITDSPEGSRGSRILGIAGVMGGM 362 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + TT+VL+E A +DP++IARS + I +++ RFERGVD + + VSLI Sbjct: 363 YGEVTAETTNVLIEAAHFDPVSIARSARRHKIPSEASRRFERGVDTKLQAAAAQEAVSLI 422 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEY 439 LCGG ASD + I F SEVKRL+ +D + IL +G V G Sbjct: 423 SRLCGGHASDTPTDYKAVKPTKPIRFKTSEVKRLTALDCSVTKISDILIDIGCHVGGGGN 482 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + V PSWR D+ DLVEE+ R+ G DQI +P V+D L+ Q R R V Sbjct: 483 GELVVDPPSWRPDLRYPCDLVEEVARLVGYDQIPIH-VPAVGVKDVTGLTADQLRRRQVA 541 Query: 500 RVLASRAMMEVVNWSFISKE--QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLK 554 LA M EV ++ F+ K+ Q E +E+ NP++AD +R +L L + Sbjct: 542 NTLAEAGMTEVWSYPFVGKQDFDDFQLDAAQIEPVSVELANPLAADRPYLRRMILHTLAR 601 Query: 555 ATGRNVDRAIADFAIFEVSHVYEND---------------TPEGQKYMAAGIRKGSSGIE 599 RN+ R ++E HV+E D T + + AG+ Sbjct: 602 TVQRNIRRDNPQVCLYESGHVFEWDPQAPAVPALPGAIRPTDDQLAALDAGLPYQPEHTA 661 Query: 600 G--SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA---PSWYHPGRSG 654 G +G + R VD + +A++ I V D ++ + P +HPGR Sbjct: 662 GILTGLAQETGWLQDNRPVD-WTYAVEAVTRIGQRVGADFSLYQPASEAVPPQWHPGRFA 720 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 ++ S +G GE HP++ D G FE LD I K ++ + +S+ Sbjct: 721 YVRLSDGTQVGLVGELHPHLNDRMGFPQHSAAFE--LDMTSIFAKVSSEPLQARPISTYP 778 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PV +DLAF V + A + I++ + ++ + +FDV++G +G +KS+A + + Sbjct: 779 PVHQDLAFTVSNEVTAQQVEEAIRSGAGQALESLELFDVYRGDQVGSQEKSLAYSLTFRL 838 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D L I++ V K A LR+ Sbjct: 839 PDRTLNSADSDALRSAIIQE-VSKLGAQLRA 868 >gi|265764202|ref|ZP_06092770.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_16] gi|263256810|gb|EEZ28156.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_16] Length = 820 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 249/834 (29%), Positives = 420/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDAVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQAALTRPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA++I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDANKIKGGEVIVKTMPEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P+E I+ L ++ E + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPVETIKSIVTSLEMKIMDEMAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++ + + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L SL + + Y + + T L FG +L F + N EVY Sbjct: 654 DLHSLVVGNLSDDIYSTALT--VNTKGGKRLATFGVVTKKMLKAFDVDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|218899714|ref|YP_002448125.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus G9842] gi|218541274|gb|ACK93668.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus cereus G9842] Length = 806 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 235/823 (28%), Positives = 412/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + + K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRHTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFANLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R + + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFVEGAGLYEAITYSLTSADKAKQYMIEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSKQITYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + N FE+ L I + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPGAEKQLDVKNTFV-FELSLVKIFGADAEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYSAIPRFPSM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|332359795|gb|EGJ37610.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK49] Length = 850 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 242/824 (29%), Positives = 430/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 50 MLVSYKWLKELVDIDVASIELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 109 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 110 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 168 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 169 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 228 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 229 VAHE-VAAIYDKSVHFKDFPLVENEKQAAASLSVALETEKAPY---YAARILENVTIAPS 284 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 285 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFDGDQIVVREARAGEKLVT 344 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL ++VI + ++AG++GG+ +T V++E A++D +I ++ Sbjct: 345 LDGEERDLEVSDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFDGKSIRKTSGR 404 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 405 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 464 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S+V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 465 SDVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 524 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 525 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAIEFTLNP 582 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E T ++ + Sbjct: 583 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFEQ-TGNPKEDL 641 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A + Sbjct: 642 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAASN 694 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 695 QIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQL 747 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G LG Sbjct: 748 QPEQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKLG 806 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 807 VGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 850 >gi|168485697|ref|ZP_02710205.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] gi|183571236|gb|EDT91764.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae CDC1087-00] Length = 801 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 244/824 (29%), Positives = 422/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D V +++ + +++ G+EVE V+ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELMDIYVPSQELAEKMSTTGIEVESVELPVADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP DA G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALSMCG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ ++ + + L + + D + +A + V + Sbjct: 180 VAHE-VAAIYDKAVNFKKFTLTETNEAAADALSVSIETDKAPY---YAARILDNVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGTDIRVRAARDGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E DL+ ++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 296 LDGEERDLAETDLVITVADKPVALAGVMGGQATEISEKSSRVILEAAVFNGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVSSTL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G ++ D + RLGF + G F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTELSYADVEDVFRRLGFGLSGNAGSFTVSVPRRRWDITIEADLFEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 D+ LP + +D L++ Q R V+ + + E++ ++ + E++V F Sbjct: 476 YDR-----LPTSLPKDDGTAGELTVTQKLRRQVRTIAEGAGLTEIITYALTTPEKAVEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T + Sbjct: 531 AQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + VD F AK L + + L + Sbjct: 590 EELPNEINSFAFALTG---LVAEKDFQTAAVPVDFFYAKG-ILETLFTRLGLQVTYIATS 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HPGR+ +I + VLG+ G+ HP + + E Y+ + IS + Sbjct: 646 EIASLHPGRTAVISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNISAIEGAL 698 Query: 704 TKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 V V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G+ LG Sbjct: 699 QPAVPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSGEKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 758 LGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 801 >gi|304436939|ref|ZP_07396903.1| phenylalanyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370138|gb|EFM23799.1| phenylalanyl-tRNA synthetase beta subunit [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 811 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 257/818 (31%), Positives = 401/818 (49%), Gaps = 63/818 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD+++ D EKI D LT G+ VE+ V E L ++ + +PD D Sbjct: 1 MQVSIKWLKDYVEIDEPAEKIADRLTMAGVPVERIVRADEGLEKVITGRIEKITPHPDSD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G + Q+V GA NVR G + A G+ +P I + K+RGI S GMM Sbjct: 61 HLLVCQLNMGSAELTQIVTGASNVREGHIVPVATVGAVLPGGKKI-SKGKLRGIPSNGMM 119 Query: 119 CSEKELM-----LSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L D+ + I LP D PVG + L L D I++ LT NR+DC V Sbjct: 120 CSAGELAIDTEGLPDEQVNGIYILPPDTPVGVPAAQVLGLDDVILEFELTANRADCFSVI 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA GK + I + + L + ++D LC+ F+ ++ V+ Sbjct: 180 GIARE-VAALTGKSLRMPTIKVKETAGVRAADL-VSIHIEDEELCRRFSARVLRDVKVAP 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 P WM RL+ G+RSI+ +VD+TN+V L+ G P H +D RI+ LT R A +GE++ Sbjct: 238 TPAWMVDRLRGAGIRSINNVVDVTNFVMLELGQPLHAYDYDRIAGHTLTARHARAGEQLH 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ D +VIA + +AGI+GG + D TT V++E A + I R+ + Sbjct: 298 TLDDSNRIAVGDELVIADSEKPAGLAGIMGGLDSEVTDKTTTVVLEAASFHGPTIRRTAR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-PRKIVFM 407 +G+ +++ RFERGVD I + L+ + T ++ I N + P + F Sbjct: 358 RIGLRSEASGRFERGVDETETIRAVTRAAQLLTEMDACTVAEGAIDVNPAPRVPTVLTFR 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++P E L LGF V E + + V VPSWR DV D+ EE+ R+ Sbjct: 418 ARTVAERIGANIPGEWMASALRSLGFIVEEEGIETYRVVVPSWRGDVTLMEDISEEVARL 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK-------- 518 YG D I S+ +P V + ++S Q+ ++ AS M E +++SF S Sbjct: 478 YGFDNIASK-MPSGAVL-QGSVSEMQAFVDTMRETFASLGMTEELSFSFTSAAALDKLCV 535 Query: 519 -EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E S+L +R + I+NP+ + +RT+LL +L+ RNV R D +F+++ V+ Sbjct: 536 PEDSML----RRAVPIMNPLMEEYPLVRTTLLTSILENAARNVARRNLDLRLFDIAPVF- 590 Query: 578 NDTPEG--------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 P +K AG+ G + W + VD +DAK V+ Sbjct: 591 --FPRALPVTELVEEKRKVAGLLTGRR----NPIAWDTDNA----MVDFYDAKG----VL 636 Query: 630 EPFVS---LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 E F+S + E G HPG++ K + V+ GE HP + FG+ + Sbjct: 637 ERFLSAVGVQKYTVERGEHFAMHPGKTAFFKKGRD-VIAILGEIHPTVAANFGIGQSVYV 695 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLID 745 FE+ +++ +KK+ K L RDLA +VD + + +I K Sbjct: 696 FEMDAETLLRYRKKKAAIKP---LPKYPASTRDLAILVDAGLTTAEIERVIAKKGGSYFR 752 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 T+FDV++GK +GEGKKS+A + Q T D+++ Sbjct: 753 GATLFDVYEGKQVGEGKKSMAFHLHFQSDDKTLTDEEV 790 >gi|328946111|gb|EGG40257.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1087] Length = 801 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 241/824 (29%), Positives = 429/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG +T V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVAEKPVALAGVMGGAATEISGKSTRVVLEAAVFDGKSIRKTSSR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGAIVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAIEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEEL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A S Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAASS 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G LG Sbjct: 699 QPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 758 VGLKSMAYSLTFQNQEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|301163539|emb|CBW23090.1| putative phenylalanyl-tRNA synthetase beta chain [Bacteroides fragilis 638R] Length = 820 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 249/834 (29%), Positives = 419/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP D G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDTVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQAALTRPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA++I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDANKIKGGEVIVKTMPEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P E I+ L ++GE + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPAETIKSIVTSLEMKIMGETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++ + + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L SL + + Y + + T L FG +L F + N EVY Sbjct: 654 DLHSLVVGNLSDDIYSTALT--VNTKGGKRLATFGVVTKKMLKAFDVDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|255009514|ref|ZP_05281640.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides fragilis 3_1_12] gi|313147287|ref|ZP_07809480.1| phenylalanine-tRNA ligase beta [Bacteroides fragilis 3_1_12] gi|313136054|gb|EFR53414.1| phenylalanine-tRNA ligase beta [Bacteroides fragilis 3_1_12] Length = 820 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 248/834 (29%), Positives = 420/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDAVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQAVLTKPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S DIC A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDICAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P+E I+ L ++ E + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPVETIKSIVASLEMKIMNETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + + L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLIAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGMETYAAKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++++ + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENSSVYELKAYVENILKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L +L + + Y + + T L FG +L F + N EVY Sbjct: 654 ELHTLVVGNLSNDIYSTALT--VNTKGGKRLATFGVITRKLLKAFDIDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|313156999|gb|EFR56431.1| phenylalanine--tRNA ligase, beta subunit [Alistipes sp. HGB5] Length = 821 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 255/830 (30%), Positives = 412/830 (49%), Gaps = 51/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 M + +WLK +LDTD+ E+I LT IGLEVE + E L + +VL+ +P Sbjct: 1 MNISYNWLKRYLDTDLPAEEIARILTDIGLEVEGFEKIETVKGGLHGVVVGEVLTCTDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI----PENNMIVNVRKIRG 111 D D + +D G +Q+VCGAPN R GL + A G+ + + + KIRG Sbjct: 61 DSDHLHLTTVDVGAGDPLQIVCGAPNCRAGLKVLCATVGTVLYPGGGDEEFKIKRSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDCIG 170 +ES GM+C+E EL + IMELP DA VG +YL + D +I+V LTPNR D Sbjct: 121 VESLGMLCAEDELGIGASHDGIMELPADARVGMTAKEYLGIEDDYLIEVGLTPNRVDAAS 180 Query: 171 VRGIALDLVA----AGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 G+A DL A GL K+ +++ P + +P+ ++ +++ +A VK Sbjct: 181 HIGVARDLAAYLRSQGLNAEVKMPDVSAFAP-DNHDLPVTVR--VENHEAAPRYAGVTVK 237 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + +P WM+ L+A G+ + LVDITN+V + G P H FDA++I V R C+ Sbjct: 238 NCKIGPSPEWMQNCLRAAGINPKNNLVDITNFVLFELGQPLHAFDAAKIEGREVVVRTCA 297 Query: 284 -GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G + LD E L+ D+++I S R IAG+ GG +G D TTDV +E A ++P+ Sbjct: 298 EGTPFVTLDGVERKLTADDLMICSAERPMCIAGVFGGLDSGIGDTTTDVFIESAYFNPVW 357 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKP 401 + ++ K G+ TDS +RFERGVD + K L+ L GG +SDI + Sbjct: 358 VRKTAKRFGLNTDSSFRFERGVDPNMQVYAAKRAALLMKELAGGEISSDITDIYPTPVED 417 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLR-ILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 K + + L G +P ED++R IL L ++ E + V+VP +R DV+ +ADL Sbjct: 418 FKFDISFARIDSLIGKKIP-EDTVRTILAALEVKILAEKEGVLSVAVPPYRVDVQREADL 476 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFI 516 VE+ILRIYG + ++ +P ++V + + + R++ + L S E+++ S Sbjct: 477 VEDILRIYGYNNVE---IP-SRVRSTLSYAPKPDRSKLMNLAADFLTSNGFTEIMSNSLT 532 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + E + ILNP+SAD++ MR +LL +L+A N +R D ++E + Sbjct: 533 KAAYYEGLESYKPENCVRILNPLSADLNVMRQTLLFNMLEAVQLNANRKNGDLKLYEFGN 592 Query: 575 VYENDTPE--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 Y D + + +AA + I +G R + F +A A ++ F Sbjct: 593 CYFYDESKRSEENRLAAYSEEYRLAIAVTGVAEPASWNARPQAASFFTLRAVAEKLLRRF 652 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + +LR E+ + G + + + +L G I + + E+ Sbjct: 653 GIDIYALRTETLQNDLF--GEALSMSLGGKELL-QIGTVSAKIRRRLDVKQDVYYLEMNF 709 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 D++ S +K + LS VKRDLA ++D+ + L ++ +R L+ V++F Sbjct: 710 DALVKSTRKHKIAAE--ELSKFPEVKRDLALLIDKQVTFSALRDVAFATERKLLKSVSLF 767 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 DV++G L EGKKS A+ +++ D R L ++ +E +K A Sbjct: 768 DVYEGDKLPEGKKSYALSFILE--------DKTRTLDEKTIEKAMKNLTA 809 >gi|313115698|ref|ZP_07801153.1| phenylalanyl-tRNA synthetase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] gi|310622025|gb|EFQ05525.1| phenylalanyl-tRNA synthetase, beta subunit [Faecalibacterium cf. prausnitzii KLE1255] Length = 803 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 258/844 (30%), Positives = 424/844 (50%), Gaps = 82/844 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLK+ +D DV+ +++ + L S G EVE++ +A +S + K++ +E+ Sbjct: 1 MKVPFSWLKEFVDIDVTAQELEEKLFSCGFEVEELIPLDAGISKVVVGKIVEMEKQEGTH 60 Query: 60 CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G + +I++ GA N+++G A GS +P + + RK++G+ES GM+ Sbjct: 61 LTKCVVDCGDYGHDIRISTGATNMKLGDCVPAALDGSTLP-GGIKIKARKMQGVESNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L+DD ++ LP D+ G ++ + L D I D+S+T NR DC V Sbjct: 120 CSGEELGLNDDLFPGSEVYGLLILPEDSVPGTDIAPVVGLDDYIFDISITANRPDCQSVL 179 Query: 173 GIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA + VAA LGK + ++ ++ P+ +K + D LC + V+ +R Sbjct: 180 GIARE-VAAVLGKPLHMPAMDYKTVCEPDA-PITVKVEAPD--LCPRYMAHYVRNIRMGE 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++ L GLRSIS +VDITN+ L+ G P H FD ++++ + VRRA +GEKI+ Sbjct: 236 SPRWMKRHLALCGLRSISNVVDITNHTLLEMGQPMHAFDLNKVAGRTIDVRRAHAGEKIV 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E+ L+P+N+VI + ++AGI+GG ++G D+NTT +L E A + + ++ + Sbjct: 296 TLDEKEFTLNPNNLVICDAEKPVALAGIMGGANSGMDENTTSLLFECATFARDCVRKTSR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTAS---DICIARNITYKPRKI 404 LG +DS R+E+GVD L + LI L CG + D+ R + K I Sbjct: 356 ALGQNSDSSARYEKGVDRHSPELGLARALHLIQELDCGDITTLEYDLTDGRPMERK--HI 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEI 463 V +++ + GI VP + + IL+RL F+V + D ++VS P +R+DVE DL EE+ Sbjct: 414 VTTPAKICGVLGITVPDQTMIDILQRLEFTVDVQADGSWDVSAPLYREDVESFPDLAEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +R YG D I L V + L+ Q + KR+LA++ E +F S + + Sbjct: 474 IREYGYDHIVPTFLNTASVTNG-GLNYDQKQQLKTKRLLAAQGFYEASTLAFYSNAELDM 532 Query: 524 FG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE- 577 ++ + ILNPIS ++S MRT L P +L N+ + + +FE++ VY Sbjct: 533 LHIPADDEARKAIRILNPISENLSIMRTLLAPSMLNVIVDNLKKGNTEGRLFEMAPVYLA 592 Query: 578 -----NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 N+ P ++ + G + EE D F K AL + Sbjct: 593 KELPINEHPHERQTLCIG---------------AFGPEE-----DFFTVKG-ALEALAAG 631 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG------ 686 L S ++ W HPG S + + LG FG+ LSN I G Sbjct: 632 FGL-SFDYKRETTPWLHPGISAAV-YCGDKRLGTFGK----------LSNEINGELEIAK 679 Query: 687 -----FEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 +YL + ++ + LS VKRDLA + D+ G + IK Sbjct: 680 DQKDNQNIYLGELDYEALMSCVDGELRYQPLSPYAAVKRDLALVCDEKTTCGEIEETIKK 739 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 L+ ++ +FD+++G +LGEGKKS+A + + K +++ ++ +I+ N+ K Sbjct: 740 ASPLVGEIKLFDIYRGANLGEGKKSMAFTLSLSDPKKEVSAEEVERVVKKILGNLKFKLG 799 Query: 800 AVLR 803 +R Sbjct: 800 IEIR 803 >gi|60682069|ref|YP_212213.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides fragilis NCTC 9343] gi|81314867|sp|Q5LC76|SYFB_BACFN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|60493503|emb|CAH08290.1| putative phenylalanyl-tRNA synthetase beta chain [Bacteroides fragilis NCTC 9343] Length = 820 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 249/834 (29%), Positives = 420/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDAVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQAALTRPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA++I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDANKIKGGEVIVKTMPEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P+E I+ L ++ E + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPVETIKSIVTSLEMKIMDETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++ + + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L SL + + Y + + T L FG +L F + N EVY Sbjct: 654 DLHSLVVGNLSDDIYSTALT--VNTKGGKRLATFGVVTKKMLKAFDVDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|237719512|ref|ZP_04549993.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 2_2_4] gi|229451372|gb|EEO57163.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 2_2_4] Length = 820 Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 246/834 (29%), Positives = 422/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPENAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + G+ TD+ +RFERG+D +I LK ++ L GGT S T P IV + Sbjct: 361 RRHGLNTDASFRFERGIDPNSVIYCLKLAALMVKELAGGTISSEIKDVFTTPAPDFIVDL 420 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 E V L G +P+E I+ L + E + ++VP +R DV+ D++E+ILR Sbjct: 421 AYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISKEQS 521 IYG + ++ +P T + + ++ ++ ++A + E++N S ++ Sbjct: 481 IYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGMETYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 + D +K +A G+ +G+ S+ +++ KA ++++ + Sbjct: 594 HFDADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L +L + + S + T L FG +L F + N EVY Sbjct: 654 DLHNLVVGNLTDDIFAAALS--VNTKGGKRLASFGIVTKKLLKAFDIDN-----EVYFAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ K+ + +S VKRDLA ++D+++ + I + +L+ +V + Sbjct: 707 LNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYETEKKLLKEVEL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|163788160|ref|ZP_02182606.1| phenylalanyl-tRNA synthetase beta subunit [Flavobacteriales bacterium ALC-1] gi|159876480|gb|EDP70538.1| phenylalanyl-tRNA synthetase beta subunit [Flavobacteriales bacterium ALC-1] Length = 808 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 253/833 (30%), Positives = 415/833 (49%), Gaps = 55/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK ++ D EK D LT +GLE+E ++ E+ L + +VL+ E++P Sbjct: 1 MKISYNWLKQFINIDWDAEKTGDLLTDLGLEIEGIERYESVKGGLEGIIVGEVLTCEQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PE-NNMIVNVRKIRGI 112 + D + ++ G +Q+VCGAPNV G A G+ + PE ++ + KIRG Sbjct: 61 NADRLKVTTVNIGADAPLQIVCGAPNVAAGQKVPVATIGTTLYTPEGDSWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L VG S ++ +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGESHDGIMVLDEKIKVGSPASMVFKVENDQVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A L K + + P S ++ L+I D+ D + + GV+ Sbjct: 181 YGVARDLKAGLLQKEVALELITPSVSSYHVDARSLKIDVDVQDKEKAPRYCGVTISGVKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P+W++ RLK++GL I+ +VD TNYV + G P H FDA ++S + + V+ +G K Sbjct: 241 EASPSWLQHRLKSIGLSPINNIVDATNYVLHELGQPLHAFDAHKVSGNKIEVKTCKAGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD +L D+++I + IAG+ GG +G +NT+++ +E A +DP++I ++ Sbjct: 301 FTTLDGVVRELHEDDLMICDAEKPMCIAGVFGGIDSGVSENTSNIFLESAYFDPVSIRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIV 405 K + TD+ +RFERG+D LK LI + GG ASDI A + ++ Sbjct: 361 AKRHALNTDASFRFERGIDPNITEYALKRAALLITDIAGGEIASDISDAYQNKIEDFQVR 420 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEIL 464 K+L G ++P E IL L V + ++VP++R DV+ +AD++EEIL Sbjct: 421 LSFDNAKKLIGEEIPKETIKSILTSLDIKVNNVTETGLGLTVPAYRNDVQREADIIEEIL 480 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKRVLASRAMMEVVNWSFI 516 R+YG + I + +K N S+ S +R+ + LAS+ E++ S Sbjct: 481 RVYGYNNIGT--------TEKLNASISNS-SRFEDYKLQNIIGNQLASQGFYEIMANSLT 531 Query: 517 SKEQSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 S L + +++LNP+S D+ MR SLL L+A N++R D +FE Sbjct: 532 SPRYIELSSDLNEEHNVKMLNPLSNDLEVMRQSLLFSGLEAVSHNINRKREDLKLFEFGK 591 Query: 575 VYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 Y ++T E K+++ + +G + R S S D F K V+E Sbjct: 592 TYHQYSETREEYKHLSMFV----TGNKTQERWNSSNSPS-----DFFYLKGTVEVVLE-- 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 L R +S AP+ GI + + L FG ++L FG+S + + D Sbjct: 641 -RLGLTRLKS-APNKIDMFSEGISLSIGKKRLVDFGLVKKSVLKHFGISQNVLFADFNWD 698 Query: 693 SI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 ++ ++Q + K + V+RD A ++D ++ + I K ++ L+ +V +F Sbjct: 699 NVLEMAQHNKIKFSAIPKYPE---VRRDFALLLDYNVTFEDIYTIAKQTEKQLLKNVNLF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK L +GKKS A+ IQ T D I +M ++ +N K A LR Sbjct: 756 DVYEGKKLPKGKKSYAVSFTIQDENKTLTDKQIDKIMFKLQKNFESKLGAALR 808 >gi|193212364|ref|YP_001998317.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobaculum parvum NCIB 8327] gi|193085841|gb|ACF11117.1| phenylalanyl-tRNA synthetase, beta subunit [Chlorobaculum parvum NCIB 8327] Length = 810 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 249/836 (29%), Positives = 418/836 (50%), Gaps = 61/836 (7%) Query: 1 MKFTLSWLKDHLDTDVS-LEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +++WLK+ + + S ++ D LT +GLEVE+V ++ P IV KV V ++P+ Sbjct: 1 MKISVNWLKEFIPSFSSDTSELVDRLTYLGLEVEEVFEQKLPDPKVIVGKVAEVRQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP--ENNMIVNVRKIRGIEST 115 D I +DTG+ + Q+VCGAPNV G++ A G+ + + + + KIRG S Sbjct: 61 DRLRICMVDTGEPELQQIVCGAPNVEEGMVVPVATIGAVLTSGDESFTIKPAKIRGERSF 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C+ EL LSDD +M L VG L+DYLE +D ++D+++TPNRSD + G+A Sbjct: 121 GMICAADELGLSDDHDGVMVLDEACEVGKPLADYLE-TDTVLDIAVTPNRSDALSHLGVA 179 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 +L EI E ++ D C ++ ++GV +P W+ Sbjct: 180 REL-----ADCHEIVFPQAPVIEFTRGGGLVEVQDEDACPYYSATVIRGVTVGPSPRWLA 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL+ +GLR + +VDITNY+ G P H FD R++ V R+ + +AL+ +EY Sbjct: 235 RRLEQIGLRPKNNIVDITNYILHSFGQPLHAFDMHRLAGSRIVVRSDAESSFMALNQEEY 294 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L P I ++ G++GG ++ + TTD+L+E A ++P +I ++ K L + TD Sbjct: 295 KLQPGMAAICDSREPVAVGGVMGGLYSAVTEKTTDILLEAAYFNPASIRKTAKLLQLSTD 354 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 S YR+ERG+D + V ++ +++IL + GG + A P +N KR + Sbjct: 355 SSYRYERGIDPCNVKRVAEYAIAMILEIAGGK---VETAEAWGSMPSTQKIVNLRPKRAN 411 Query: 416 ---GIDVPIEDSLRILERLGFSVIGE------YDKFEVSVPSWRQDVEEKADLVEEILRI 466 G + + +R+LE++ + + D+ +VPS R D+E++ DL+EE+ R+ Sbjct: 412 AVLGSSITASEMMRLLEKICIKAVSQGAVSNDADQIAFAVPSHRVDIEQEIDLIEEVARL 471 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG + ++ ++ R + + Y++ ++ EV+ I K ++ F Sbjct: 472 YGYNNLEPSSAMVSSYPVSRKIP--EYFPDYLRNIMIGLNFREVLTNPLIRKAEASCF-- 527 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + LNPIS ++ +R L P LL+ G N+ D +FEV+H +E PE ++ Sbjct: 528 SDQPVSALNPISEELEVLRPCLAPSLLRIVGHNIRHGNRDLRLFEVAHGFEM-LPEAERS 586 Query: 587 MAAGIRKG------SSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + + K S I G R W+ EE VD +D + ++E LD Sbjct: 587 GSGPLAKYRERELLSMVITGRREPRSWNHSGEE----VDFYDLRGVVEMLLEKLNLLD-- 640 Query: 639 RFESGAPSWYHPGRSGIIKTSAE------IVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 A + Y+ GI TSAE + G + +L F L +V+L Sbjct: 641 ---KSALNIYNANTIGIEITSAENGNSPALKAGTVQQVSKEVLAAFDLDQ-----DVFLA 692 Query: 693 SIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF 750 I +S +R VV+ S V+RDL+F + +HIPA LV++ D L+ V +F Sbjct: 693 EIDVSVLERCFESGVVYEPPSKFPVVERDLSFALPRHIPAQRLVDLATESDPLVRSVRIF 752 Query: 751 DVF-QGKSLGEGK--KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DVF +G+S G G+ +SVAI + + T ++ I ++ ++ +N + A +R Sbjct: 753 DVFDRGESGGHGQAERSVAISLELADRTGTMNEETINAVVQKVSDNAKSELGAEIR 808 >gi|222151573|ref|YP_002560729.1| phenylalanyl-tRNA synthetase beta subunit [Macrococcus caseolyticus JCSC5402] gi|222120698|dbj|BAH18033.1| phenylalanyl-tRNA synthetase beta subunit [Macrococcus caseolyticus JCSC5402] Length = 799 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 242/812 (29%), Positives = 417/812 (51%), Gaps = 44/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL +++ DV +E + + +T G+E+E++ D R+ + + V S+E++PD D Sbjct: 1 MLVSKEWLDEYVKVDVPVEALAEKITRSGIEIEEIIDYRKDIKDLVVGHVESIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + Q+VCGAPNV G + PG +P + + K+RG+ES GM+ Sbjct: 61 KLNVCQVNVGEEVK-QIVCGAPNVATGQTVIVCLPGGRLP-GGIKIKKAKLRGVESNGMI 118 Query: 119 CSEKELMLSDD--------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL +S + + E I AP L+ L L D +++ LTPNRSDC+ Sbjct: 119 CSLGELGISSNLIPEAYEKGIYVFEEAI-APGTDALA-ALSLDDAVMEFGLTPNRSDCMS 176 Query: 171 VRGIALDLVAAGLG--KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + G A + A KL E NI+ + E + I +++D++L +A VK V+ Sbjct: 177 MIGSAFETSALYEEPLKLPESNINETI--EQVADLISIEIEDATLSPYYAARIVKNVKIG 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P ++ RL G+R I+ +VD++NYV L+ G P H+FD +I S + VR A GEK+ Sbjct: 235 PSPAHIQGRLIKAGIRPINNVVDVSNYVMLEYGQPLHMFDYDKIGSTTIKVRPATDGEKM 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD++E L+ +++VI + ++AG++GG + D+T +VL+E A++ P+NI ++ Sbjct: 295 TTLDDKERALTAEDIVITNGTTPVALAGVMGGDFSEVTDSTVNVLIESAMFAPLNIRKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+GV + ++ L L+ G S I A + + Sbjct: 355 NRLNLRSESSSRFEKGVAAEFVLDALDRAAYLLQENAQGEVLSGIASAGTLPQFTTNVQI 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ +L G D+ + I ERLGF + D F V VPS R D+ K DLVEE+ RI Sbjct: 415 TTDDINQLIGFDISNTEIKNIFERLGFETKVDGDSFNVIVPSRRGDITIKEDLVEEVARI 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D + + LP T+ + L+ Q++ R VK +L + + + ++ +S E+S F Sbjct: 475 YGYDALPA-TLPETKTNKQVGLTDYQAKRRAVKALLQGLGLNQAITYALVSNEKSKQFAL 533 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + E +L P+S D + +R SLLP L+ N R + D A +E+ + + E+ P Sbjct: 534 KEAETTALLMPMSEDHAVLRQSLLPHLIDVVSYNNARQMKDVAFYEIGNTFFKQEDLLPS 593 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++++A I +G + + + VD F K + I + L + R+ Sbjct: 594 EEEHVAGII---------TGLVTPTMHQGKKEHVDFFHVKG-IVEAISERLGL-AFRYVR 642 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-IPISQKKR 701 HPGRS I + E +G G+ HP + L FE+ L++ + I+Q + Sbjct: 643 SDEPMLHPGRSADIYVN-ETKIGIIGQLHPTVEKENDLKETYV-FELDLNALLSINQGQI 700 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGE 760 + + RD++ V++ G L+ I VD + + VFDV++G+ + + Sbjct: 701 IYS----MIPKFPGTSRDISLEVERKQDTGDLIAEILKVDSKYLKSAEVFDVYEGEHIAQ 756 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 KKSVAI++ + T D++I+ + D ++E Sbjct: 757 DKKSVAIRMEFLNPEQTLTDEEIKPIYDAVIE 788 >gi|328952056|ref|YP_004369390.1| Phenylalanyl-tRNA synthetase beta chain [Desulfobacca acetoxidans DSM 11109] gi|328452380|gb|AEB08209.1| Phenylalanyl-tRNA synthetase beta chain [Desulfobacca acetoxidans DSM 11109] Length = 798 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 251/827 (30%), Positives = 420/827 (50%), Gaps = 52/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +++WLKD ++ V E++ D LT GLEVE V+ + +V +V V +P D Sbjct: 1 MRLSINWLKDFVEVAVPPEELADRLTLAGLEVEAVEIPDVRFVGVMVGRVEQVAAHPQAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L + +VVCGAPNV+ G L +AP G+ + + + V K+RGI S GM+ Sbjct: 61 RLKLADVFDGRRRYRVVCGAPNVQAGGLYPFAPVGAVLADGKPLKAV-KLRGILSEGMLL 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 +E EL LSDD + +MELP D VG L + L L D +++V++TPNR DC+ V G+A ++ Sbjct: 120 AEDELGLSDDHSGLMELPSDLTVGSDLVEALSLRDMVLEVAITPNRPDCLSVLGLAREVS 179 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A L+ ++ +ESI D++D C + V ++ +P W+R+RL+ Sbjct: 180 ALLDVPLRLPSVELQPDTESIQRWAAVDIEDPENCPRYTARMVVDLQVRPSPFWLRRRLQ 239 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE-KILALDNQEYDL 297 G R+I+ LVD+TNYV L+ G P H FD + + VRR + E + LD Q+ L Sbjct: 240 VSGFRAINNLVDVTNYVLLEYGQPLHAFDFDCLQGGRIIVRRPRTEETRFTTLDGQDRPL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + ++I +IAG++GG+ + +T VL+E A ++P +I R+ K LG+ ++S Sbjct: 300 AWETLLICDAAVPVAIAGVMGGQASEVTGDTRRVLIESAYFNPPSIRRASKRLGLSSESS 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMNSEVKR 413 YRFERG+D + ++P L L+ GG D+C R I+ ++ + Sbjct: 360 YRFERGIDPETLLPALDRAAQLMAEFGGGRILHGLIDVC-PRPISRPRLRLRLGRTSAVL 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + +D P+ IL RL I E D V VPS+R D+ + DL+EE+ R++G D+I Sbjct: 419 GTPLDKPLVSD--ILRRLQMPPITEDADALTVQVPSYRGDLTREVDLIEEVARLHGYDKI 476 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKR-VLASRAMMEVVNWSFISKEQSVLFGGGQRE- 530 P+ L ++ +++R R R +L EV+N++F + L G + Sbjct: 477 ---PVTLPRLAMSAARPPKEARLREKARELLLGMGFFEVINYAFQPDRLTTLLEGEDPDR 533 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQ 584 +++ NPIS + + MR SL+PGLL+ N I D IFE+ + P+ + Sbjct: 534 SFVKVANPISEEQAVMRRSLIPGLLQNMRLNAAHFIKDVKIFEIGKTFWPCSGGKLPD-E 592 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS---LDSLRFE 641 M AG+ G+ W+ +D +D K V+E ++ ++ + F+ Sbjct: 593 PLMLAGLLTGARTTPA----WNLAETA----LDYYDVKG----VVENLLAGLLVNPVNFK 640 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + S+ P G + S E VLG+FGE HP+I + F L F+ LD + ++ Sbjct: 641 PASVSFLCP---GALIQSGETVLGWFGEIHPDIAEQFDLKPRAYVFQ--LDFVLVT---- 691 Query: 702 TKTKKVVHLSSL--HP-VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKS 757 K+ H + L +P V RDLA + P+ + I + + + +FDV+ G Sbjct: 692 AAAKECAHFTPLPRYPAVYRDLAVTLAASWPSDQVTEAIYALGHPWLVEAQLFDVYAGPP 751 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + G++S+A + + + T D+ + + +++ + +K A LR+ Sbjct: 752 VPPGERSLAFHLHYRDPERTLTDEVVDPWHEAVIQGLQEKFGAKLRT 798 >gi|332361509|gb|EGJ39313.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1056] Length = 801 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 241/834 (28%), Positives = 425/834 (50%), Gaps = 64/834 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNIGAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVA-------------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 +A ++ A K E ++S L +E P +A Sbjct: 180 VAHEVAAIYDKSVHFKDFPLVENEKQAEDSLSVALETEKAPY--------------YAAR 225 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVR 279 ++ V +P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR Sbjct: 226 ILENVTIAPSPQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFDGDQIVVR 285 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A +GEK++ LD +E DL ++VI + ++AG++GG+ +T V++E A++D Sbjct: 286 EARAGEKLVTLDGEERDLEVSDLVITVADKSVALAGVMGGQATEISGQSTRVVLEAAVFD 345 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNIT 398 +I ++ L + ++S RFE+G+++ + L S+I L G T + I ++ Sbjct: 346 GKSIRKTSGRLNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSTGSLD 405 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 ++V S+V R+ G D+ D + + RLGF + G ++F VSVP R D+ +AD Sbjct: 406 TSDVEVVSSLSDVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEAD 465 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EEI RIYG D++ + LP + QQ R R V+ + + E++ ++ + Sbjct: 466 LYEEIARIYGYDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTP 523 Query: 519 EQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E+++ F L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E Sbjct: 524 EKAIEFTLNPSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFE 583 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLD 636 T ++ + I + + G L ++K + + VD F AK V+E Sbjct: 584 Q-TGNPKEDLPNEINSFAFALTG---LVNEKDFQTKPAAVDFFYAKG----VVEALFDKL 635 Query: 637 SLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L E A S HPGR+ +I + V G+ G+ HP + + E Y+ Sbjct: 636 GLTAEYAASSQIKSLHPGRTALISIKGQPV-GFVGQVHPATAKAYDIP------ETYVAE 688 Query: 694 IPIS--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTV 749 + +S +++ + ++ V RD+A ++ I +++ I+ V RL D+ + Sbjct: 689 LNLSAIEEQLQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKL 747 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD+F G LG G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 748 FDIFSGDKLGVGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|317503113|ref|ZP_07961185.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella salivae DSM 15606] gi|315665763|gb|EFV05358.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella salivae DSM 15606] Length = 822 Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 257/856 (30%), Positives = 421/856 (49%), Gaps = 87/856 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTSIGLEV+ ++ + L + KVL+ +P Sbjct: 1 MNISYKWLKEYVDFDLTPQQTADALTSIGLEVDALEEVQTIKGGLKGLYVGKVLTCVDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + E++ + K+RG+E Sbjct: 61 NSDHLHVTMVDLGKDEPQQIVCGAPNVATGQKVIVADLGCVLYDGEDSFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA VG ++Y L SD +I++ +T NR D + Sbjct: 121 SFGMICAEDEIGVGNSHGGIIVLPDDAVVGTPAAEYYHLESDWLIEIDITANRGDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINI-------SC---PLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 G+A DL A LK+ N SC + +E +P+++ ++ +S CK +A + Sbjct: 181 GVARDLYAW----LKQNNYPTTLHRPSCDEFKVDNEDLPIDV--EVQNSDACKRYACVSI 234 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 +P W++ +L+ +GLR I+++VDITNYV + G P H FDA + + VR Sbjct: 235 TDCEVKESPAWLQNKLRVIGLRPINSIVDITNYVMMAYGQPMHCFDADMVKGHKIVVRTQ 294 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G K + LD +E+ LS ++ I + IAG+ GGK +G D T +V++E A++ P Sbjct: 295 ADGTKFVTLDGEEHTLSDRDLSICNAEEPMCIAGVFGGKGSGTYDTTRNVVLESAVFHPT 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 I +S + G+ TDS YRFERG+D G++ LK L L GG I + Y P Sbjct: 355 WIRKSARRHGLSTDSSYRFERGIDPNGVVYALKQAAILCKELAGGK---ISMQIKDVY-P 410 Query: 402 RKIVFMNSE-----VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEE 455 I N + V RL G ++ E I+ L +I E D ++ VP +R DV+ Sbjct: 411 EPIEGFNVDLSFDYVHRLIGKEIGKETIKNIVSSLEMKIIEETEDGLKLIVPPYRYDVQR 470 Query: 456 KADLVEEILRIYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 +D+VE+ILRIYG + ++ + L + EDK+ T + L E+ Sbjct: 471 PSDVVEDILRIYGYNNVEIPTRLNSSLTVAGDEDKK-----YRLTNLLGEQLVGCGFNEI 525 Query: 511 VNWSFISKEQSVLFGGGQREL---------EILNPISADMSNMRTSLLPGLLKATGRNVD 561 +N S S L+ EL +++NP+SAD+ MR +LL G L++ RNV+ Sbjct: 526 LNNSL-----SKLYYYTDLELNAYPESSTVKLMNPLSADLGVMRQTLLFGGLESIMRNVN 580 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG------------IEGSGRLWSDKS 609 R + FEV +VY+ + +K+ A K S IEGS W Sbjct: 581 RRNGNIRFFEVGNVYKYNK---EKWQAEAPYKAYSEDRHLALWLTGKRIEGS---WIHAD 634 Query: 610 EERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 E+ +++ KA ++ VS +L + + S K + G Sbjct: 635 EDSS----IYELKAYVQNIFTRVGVSAGALVVSESDNNIFSKALS--YKNRGGKLFAEVG 688 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHI 728 + +L G+ P+ E+ LD+ + + R + + V RDLA ++D+ + Sbjct: 689 ILNMKLLKKMGIEQPVYYAEIDLDA--LLKAVRNNEFEFEEICKYPAVSRDLALLLDKKV 746 Query: 729 PAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILM 787 + I + +L+ V +FDV++GK+L EGKKS A+ ++Q T D I +M Sbjct: 747 SFEQVEQIAFQTEKKLLKRVELFDVYEGKNLPEGKKSYAVNFILQDANKTLNDKAIEAIM 806 Query: 788 DRIVENVVKKTNAVLR 803 ++++ + + A LR Sbjct: 807 QKLIKQLTTQLGAELR 822 >gi|210623623|ref|ZP_03293949.1| hypothetical protein CLOHIR_01899 [Clostridium hiranonis DSM 13275] gi|210153493|gb|EEA84499.1| hypothetical protein CLOHIR_01899 [Clostridium hiranonis DSM 13275] Length = 797 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 251/833 (30%), Positives = 418/833 (50%), Gaps = 65/833 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M ++ WL+D++D D+ +++ D +T G ++E V+ E + + K+L + +P+ D Sbjct: 1 MLVSVKWLRDYVDIDMDVKEFADMMTMTGTKMETVEYFGEDIENVVVGKILEINPHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I+ ++D G+ + +Q+V GA NV+VG A G+ +P + + K+RG S GMM Sbjct: 61 KLIVTKVDAGE-KVLQIVTGAKNVKVGDYIPLAIHGAKLP-GGIKIKTGKLRGEVSEGMM 118 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + + +++ G + + L ++D +ID LT NR DC Sbjct: 119 CSAAELGIDEKYVEEYKKNGIFLLDYEDSYETGKDVKEVLGINDAVIDFELTSNRPDCRC 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V GIA + K+K +S + E+I +++ +++ LC+ +A VK V+ Sbjct: 179 VIGIAREAAVTVGKKVKYPEVSVKEEADEAIDFDVQ--IENPELCRRYAARIVKDVKIAP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITNYV L+ G P H FD S I + + VR A GEK + Sbjct: 237 SPYWMQRRLIEAGVRPINNIVDITNYVMLEMGQPMHAFDLSDIGTGKIVVRNAEEGEKFV 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L D +VI + + ++AG++GG ++ D TT++L E A + N+ + K Sbjct: 297 TLDEQERTLDKDMLVITNGEKSLALAGVMGGLNSEIKDTTTELLFESANFQAENVRATSK 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFM 407 LG+ T+S RFE+G+D + L+ L G I N KP +KI+ + Sbjct: 357 KLGLRTESSSRFEKGIDPNLAELAVNRAAQLVEMLGEGKVLK-GIEDNYPSKPEQKILTV 415 Query: 408 NSEVKRLS---GIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEI 463 N KR++ GID+PI + ILE L F + ++ E+ VPS+R D+E++AD++EEI Sbjct: 416 NP--KRITARLGIDLPIAQFIEILESLEFDCDLKSAEELEIRVPSFRLDMEQEADVLEEI 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFIS--- 517 RIYG + I P Q+E ++ R ++ +K S + EV+++SF+S Sbjct: 474 ARIYGFENI-----PAKQLEGNYTAGIKTERQKFNDILKSTALSTGLYEVLSYSFVSPSG 528 Query: 518 --KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 K + + +++LNP+ + S MRT+++P +L N+ R +FA FE HV Sbjct: 529 VDKIKLPADSPKRNFVKLLNPLGEETSVMRTTMIPNMLDIVYTNMSRKNPEFAGFECGHV 588 Query: 576 Y---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + E P +M + + VD F K V+E Sbjct: 589 FVPSEEGLPSELNHMCMAM--------------------YGKEVDFFVLKGAVEKVLERA 628 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + +HPGR I + +V GY GE HP++L+ +GL+ + E+ D Sbjct: 629 GMKEYEIIPEKENTTFHPGRCAKIVCNGALV-GYLGEVHPDVLENYGLTQRVYVCEIDTD 687 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 + RT K L RD+A V + + +IIK N + L++ +FD Sbjct: 688 VV-FENSDRTIVFK--SLPKYPSTSRDIALTVKDEVYVKDIEDIIKANGEGLVESYRLFD 744 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V++G + G KSVA + + + T DDDI + + I++ + +K A LR+ Sbjct: 745 VYRGSQIETGYKSVAYSITYRSAEKTLTDDDIAPVHENILKELSEKLGAELRA 797 >gi|229118051|ref|ZP_04247410.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock1-3] gi|228665274|gb|EEL20757.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus cereus Rock1-3] Length = 806 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 235/823 (28%), Positives = 413/823 (50%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEESVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQEHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQVQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G D+ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTDISASEMGTMFTNLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I P+ L + + L+ Q++ R V+R L + E + +S S +++ + Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADKAKQYMVEP 536 Query: 529 RELEILN---PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E +N P+S + S +R SL+P LL+A NV R A++EV ++ + P Sbjct: 537 NEKAPVNLALPMSEERSQLRLSLVPQLLEAVSYNVARKNDSVALYEVGSIFLPTEAGELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++ AG+ G + W + + VD F K + + + + + Sbjct: 597 KEEQHL-AGVMTGLA----LHHAWQGEK----KVVDFFVMKGVLEGLFDVLGVANQIAYA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I E V+G+ G+ HP + + FE+ L + + + Sbjct: 648 PAKREGMHPGRTADIVLDGE-VIGFIGQLHPESQKQLDVKDTFV-FELSLVKVFGADVEE 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 T + S+ RD+A +V + A + +I L+ DVT+FD+++G+ + E Sbjct: 706 TYYLPIPRFPSM---TRDMAVVVTKETKACEMKQVIAEAGGELLKDVTLFDLYEGEKMEE 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ +R++ V +K A LR Sbjct: 763 GKKSLAFSMTYFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 805 >gi|212638389|ref|YP_002314909.1| phenylalanyl-tRNA synthetase subunit beta [Anoxybacillus flavithermus WK1] gi|212559869|gb|ACJ32924.1| Phenylalanyl-tRNA synthetase beta subunit [Anoxybacillus flavithermus WK1] Length = 804 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 241/822 (29%), Positives = 433/822 (52%), Gaps = 38/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL++++D T ++ +++ D +T G+EVE V+ R + + I VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLTGITAKQLADRITKAGIEVESVEVRNKGVQGVVIGHVLEREQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +Q++CGAPNV G A G+ +P N + K+RG ES GM Sbjct: 61 DKLSKCLVDIGEGDPVQIICGAPNVAKGQKVAVAKVGAVLP-GNFKIKRAKLRGEESNGM 119 Query: 118 MCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS E +L+ + + I P DAPVG + L L D ++++SLTPNR+DC+ + Sbjct: 120 ICSLQELGVESKLVPKEYADGIFVFPSDAPVGADALELLYLDDEVLELSLTPNRADCLSM 179 Query: 172 RGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + VAA LG+ +K I ++ES+ I +D +A VK V+ + Sbjct: 180 IGVAYE-VAAILGRSVKLPTIELHENNESVHDYISVRVDAQEDNPLYAGRIVKNVKIGPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I+ Sbjct: 239 PLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKNGETIVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L+ +++VI + ++AG++GG ++ D+T V +E A + I ++ K+ Sbjct: 299 LDDVERTLTEEHLVITNGKEPVALAGVMGGANSEVKDDTMTVFIESAYFTSPVIRQAVKD 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D L +L+ GG + N T++P++ V + Sbjct: 359 HGLRSESSTRFEKGIDPARTKEALDRAAALMAEYAGGEVVGGVVEAN-TWQPKEAVVTIA 417 Query: 410 --EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + ++ G + ++ RIL L F + F ++VPS R+D+ + D++EE+ R+Y Sbjct: 418 LDRINQVLGTAITKDEVARILTNLQFPFTEDNGTFTITVPSRRRDIAIEEDIIEEVARLY 477 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + + LP+ + + + L+ Q++ R V+R L + + + +S ++ ++ +F Sbjct: 478 GYDNLPA-TLPIGEAKPGK-LTPYQAKRRKVRRYLEDVGLFQAITYSLTNEAKATMFALE 535 Query: 528 QRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPE 582 E + + P+S + S +R SL+P LL+A N R + + A++E VY +N+ P Sbjct: 536 TAEPIRLALPMSEERSVLRQSLVPHLLEAASYNRARQVENVAVYETGAVYLSKGDNELP- 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 +K AG+ G +W + + VD + AK + + + ++ Sbjct: 595 NEKERLAGVLTGV----WHAHMWQGEK----KAVDFYVAKGILDGLFALLGVENRIEYKQ 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + + G+ G+ HP + + L FE+ L + ++ + Sbjct: 647 AKREHLHPGRTADILLDNKTI-GFIGQLHPIVQKEYDLKETYV-FELALTDLLNAEVEDI 704 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEG 761 + + S + RD+A +VD+H+ AG L I++ L+ DV++FDV++G L EG Sbjct: 705 RYSPIPRFPS---ITRDIALVVDEHVVAGELQKAIVEAGGELLKDVSIFDVYKGDRLPEG 761 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A + + T D+++ + +++++ V ++ A LR Sbjct: 762 KKSIAFSLRYYDPERTLTDEEVTNVHEQVIKAVEQQFGATLR 803 >gi|333028254|ref|ZP_08456318.1| putative phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. Tu6071] gi|332748106|gb|EGJ78547.1| putative phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. Tu6071] Length = 836 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 262/866 (30%), Positives = 413/866 (47%), Gaps = 93/866 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGQVRAIEELE 60 Query: 54 --RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + D E+Q +VCGA N VG V PG+ +P + + RK Sbjct: 61 GFKKPIRFCHVDVGDANGTGELQEIVCGARNFAVGDKVVVVLPGAVLP-GDFAIAARKTY 119 Query: 111 GIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 G S GM+CS EL + DD + I+ LP VG + LEL D ++D+++TP+R C+ Sbjct: 120 GKTSHGMICSADELGMGDDGTHGIIVLPPQYEVGTDAIELLELVDEVLDIAVTPDRGYCL 179 Query: 170 GVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 +RGIA + +A GL L++ I++ P ++ P+EI D C F V G+ Sbjct: 180 SMRGIARETAIAYGL-PLRDPALIDVPGP-NAHGYPVEIA----DPFGCDRFTARTVAGL 233 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 P WM +R++ G+R +S VDITNYV L+ G P H +D S++ + VRRA +G Sbjct: 234 DPEARTPIWMARRIQKAGMRPVSLTVDITNYVMLELGQPLHAYDRSQVRGPIGVRRARAG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA-----GCDDNTTDVLVEVALWD 339 E + LD Q L +++VI + +AG++GG G + TT+V+VE A +D Sbjct: 294 ETLKTLDGQNRKLDAEDLVITDERGPIGLAGVMGGAETEIADHGAELGTTEVVVEAAHFD 353 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 I IAR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 354 QITIARASRRHKLASEASRRFERGVDPEAASAAAQRTVDLLVLLAGGTADAGVTEVIAPS 413 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 PR + R++G+ E +R L+++G V G+ D+ V+VPSWR D+ DL Sbjct: 414 APRTVTMPAGHPDRVAGVAYGREIVVRRLQQVGCDVYGQ-DELIVTVPSWRPDLTAPNDL 472 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EE++R+ G + + S L + R L+ +Q R V R LA +E +++ FI + Sbjct: 473 AEEVIRLEGYENLPST---LPKPPAGRGLTERQRFHRRVGRALAGHGYVEALSYPFIGTD 529 Query: 520 QSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 G +R + ++NP+S + +RT+LLPGLL A RN R D A+FE Sbjct: 530 AFDALGLADDDPARRVVRLVNPLSDEEPALRTTLLPGLLAALRRNEGRGSHDLALFETGL 589 Query: 575 VYE-----------------NDT---------PEGQKYMA---AGIRKGSSGIEGSGRL- 604 V+ DT PE +++A AG R+ SG G GR Sbjct: 590 VFHPRAESVVPERLPVAHRPEDTQLDELNTALPEQPRHLAVVLAGARE-RSGWWGKGRPA 648 Query: 605 -WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SA 660 W+D + + L GA +HPGR + A Sbjct: 649 DWADAV---------------EAARTAAAEAGADLVVRKGAYGPWHPGRCAELVAFVDGA 693 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RD 719 E V+G+ GE HP ++ GL C E+ LD++ + + ++ S +PV +D Sbjct: 694 ERVIGHAGELHPRVIKALGLPARACATELDLDALERAGAGAVQAPRI----SNYPVATQD 749 Query: 720 LAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +V +PA + + ++ L++ + +FDV+ G L EG KS+A + + T Sbjct: 750 VALVVPADVPAAEVESALREGAGELLESLRLFDVYTGDQLAEGHKSLAYALRFRAADRTL 809 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 ++ D V + T AVLR Sbjct: 810 TVEEATAARDAAVALAAEHTGAVLRG 835 >gi|284052815|ref|ZP_06383025.1| phenylalanyl-tRNA synthetase subunit beta [Arthrospira platensis str. Paraca] Length = 817 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 240/835 (28%), Positives = 425/835 (50%), Gaps = 49/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ +D +S E++ +TLT G EVE +++R + ++ K+ + +P+ D Sbjct: 1 MRISLNWLRELVDISISPEQLAETLTVAGFEVEDIEDRRTWADGVVLGKIAEIAPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +VCGAPN ++ A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGQSDRLNIVCGAPNAAADMIVAVATIGTYLPAIDLKLKKTKLRGVPSMGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L +S I +D PV G + + L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLSELGLEKESPGIHSFDLDNPVLGSDVRPLIGLDDVILDVTATANRADGLSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + A G LK + + L + P ++ D+ +S C + + V+ +P+W+++ Sbjct: 181 VAALTGGSLKIPDAAGVLIGDQDPAGGLEIDIMESQACPTYIGGAIANVKIAPSPDWLKR 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL+A G+R I+ +VD+TNY+ L+ G P H FD R++++ + VR A + E + Sbjct: 241 RLQAAGIRPINNVVDVTNYILLEWGQPLHAFDRDRLTNLTGSQNLTIGVRFAKASESLKT 300 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q L N+VI ++ + ++AG++GG+ + TT++++E A++ P+ I RS + Sbjct: 301 LDGQTRQLQDQNLVITANDQPVALAGVMGGEDTEVHEGTTNLILEAAVFSPVAIRRSARV 360 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 GI T+S R+ERG++ + + + LI L GGTA+ A T + R ++ Sbjct: 361 QGIRTESSTRYERGINQAELALACRRAILLISELAGGTATVQKSASGAT-QMRMTQEVSL 419 Query: 410 EVKRLSGI--------DVPIEDSLR------ILERLGFSVI---GEYDKFEVSVPSWRQ- 451 + RL+ I D +E L+ IL LG GE + V+VP +RQ Sbjct: 420 SLDRLNAILGPLKRGEDTEVESYLQPPEVESILTALGCGTSRQEGESVVWTVTVPPYRQR 479 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+E + DL+EE+ R+YG D+ S+ LP V L +++ R ++ + + E++ Sbjct: 480 DLEREIDLIEEVARLYGYDRF-SDTLPTQSVPGY--LPPEEAAKRDLRSAFRAAGLTELM 536 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++S + ++ G ++ I NP+ + S +RT +L GL+ A N++ E Sbjct: 537 HYSLVKQQ-------GDNQVVIANPLFVEYSALRTEMLSGLIDAFVFNLENGNGPLNGLE 589 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + ++ D G+ Y G G + S W + ++ + F+AK SV E Sbjct: 590 IGRIFRRD---GEVYQEEDAIAGVIGGDPSQGRWVNSGKDNP--MSWFEAKGVLESVWER 644 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 R ES HPGR+ + + + LG FG+ HP I L + FE L Sbjct: 645 LSLSVEYRQESDV-KMLHPGRTATLWLNGD-RLGIFGQLHPQIQRQKELPEAVYLFEFRL 702 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTV 749 + + + K+ S P RDLAF V + L +IKN ++++ V + Sbjct: 703 PVLTAAITAKDYLKRPFQSYSTFPASDRDLAFFVADSVSVADLQKTMIKNGGKILESVDL 762 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD ++GK++ E ++S+A +++ + T D+DI L +I + +VK+ LRS Sbjct: 763 FDEYRGKNVPENQRSLAFRLVYRVGDRTLTDEDIEPLQQKIRDALVKEFQVSLRS 817 >gi|323704470|ref|ZP_08116048.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacterium xylanolyticum LX-11] gi|323535932|gb|EGB25705.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacterium xylanolyticum LX-11] Length = 793 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 245/828 (29%), Positives = 428/828 (51%), Gaps = 60/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + SWLKD++D V +K+ D LT G +VE + + E + I K++S+E++PD + Sbjct: 1 MLISYSWLKDYVDLSVDAKKLADDLTMSGSKVETIKSYGEEIKNVVIGKIVSLEKHPDAN 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +D G+ +++Q+V GA N++VG A GS +P + + K+RG+ES GMM Sbjct: 61 KLQIGIVDVGE-EKLQIVTGAQNIKVGDYIPVALHGSTLP-GGVKIKKGKLRGVESNGMM 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS KEL L + I LP + P+G + LEL D +I+ +TPNR DC+ V Sbjct: 119 CSAKELGLDESLLPEYQRNGIFILP-ELPLGEDVRKVLELDD-VIEFEITPNRPDCLSVV 176 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA + A + + P + + DD LC + ++ + +P Sbjct: 177 GIAREAAATYRKSYSMPEVKINEVDDKNPATVTVEADD--LCFRYVARVIRNAKIGPSPM 234 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 WM+ RL G+R I+ +VD+TNYV ++ G P H FD ++ + + VRRA GEK+ LD Sbjct: 235 WMQMRLLKAGIRPINNIVDVTNYVMMELGQPLHAFDLDKVKNRHIIVRRAKEGEKLTTLD 294 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++E L D +VIA + R +AG++GG++ D+T ++L+E A + NI + + LG Sbjct: 295 DKERILDRDMLVIADEERAIGLAGVMGGQNTEITDDTINILIESANFKGSNIRYTSRKLG 354 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--RKIVFMNS 409 + +++ RFE+G+D + + L+ L GG + + ++ KP K++ + Sbjct: 355 LRSEASSRFEKGLDPEITVLACNRAAQLMAELSGGEILEGLL--DVYPKPVTEKVLSVRY 412 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 E + +L G ++ ++ IL L F I + + V VP++R D++ +AD+ EEI R+YG Sbjct: 413 ERINKLLGTNLSCQEMKEILSFLDFGAICDGENLIVKVPAFRSDIDGEADIAEEIGRMYG 472 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------KE 519 + I+ L TQ+ + +Q VK V S + EV+ SF+ + Sbjct: 473 YNNIEDTLLKGTQITAGVK-TREQKLEDTVKDVFLSCGLNEVITTSFMGMKDLDRINLPD 531 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 S L + ++I+NP+ D + MRT+LLP +L N R + +F FE+S V+ Sbjct: 532 DSYL----RNAVKIMNPLGEDQAYMRTTLLPFMLNVAYTNYSRKVPEFKAFEISRVF--- 584 Query: 580 TPEGQ--KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 P+ + + I+ G + G VD K +++ +++ + Sbjct: 585 IPKSLPVEELPTEIKSGIIAMYGQD-------------VDFLTIKGVVEELLD-VLNIKN 630 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 +++ YHPGRS + E + FGE P++ + + ++ + EV L+ + Sbjct: 631 VKYVRSQNPAYHPGRSADVIVEDEKIC-VFGELSPDVAENYDINKRVYVAEVNLELL--- 686 Query: 698 QKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 K +KV +P V+RD+A +VD++ + ++I+ V +L+DDV +FDV++G Sbjct: 687 -FKHANDEKVYKPLPKYPAVERDIAVLVDKNTFVADIESVIRKVGGKLVDDVKLFDVYEG 745 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ +GKKSVA + + T D+++ + D+IV ++ ++ A LR Sbjct: 746 ENIPDGKKSVAFSIWYRSYDKTLTDEEVSKVHDKIVMSLNEELGAQLR 793 >gi|209526097|ref|ZP_03274629.1| phenylalanyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] gi|209493485|gb|EDZ93808.1| phenylalanyl-tRNA synthetase, beta subunit [Arthrospira maxima CS-328] Length = 817 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 240/835 (28%), Positives = 425/835 (50%), Gaps = 49/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ +D +S E++ +TLT G EVE +++R + ++ K+ + +P+ D Sbjct: 1 MRISLNWLRELVDISISPEQLAETLTVAGFEVEDIEDRRTWADGVVLGKIAEIAPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +VCGAPN ++ A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGQSDRLNIVCGAPNAAADMIVAVATIGTYLPAIDLKLKKTKLRGVPSMGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L +S I +D PV G + + L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLSELGLEKESPGIHNFDLDNPVLGSDVRPLIGLDDVILDVTATANRADGLSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + A G LK + + L + P ++ D+ +S C + + V+ +P+W+++ Sbjct: 181 VAALTGGSLKIPDAAGVLIGDQDPAGGLEIDIMESQACPTYIGGAIANVKIAPSPDWLKR 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL+A G+R I+ +VD+TNY+ L+ G P H FD R++++ + VR A + E + Sbjct: 241 RLQAAGIRPINNVVDVTNYILLEWGQPLHAFDRDRLTNLTGSQNLTIGVRFAKASESLKT 300 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q L N+VI ++ + ++AG++GG+ + TT++++E A++ P+ I RS + Sbjct: 301 LDGQTRQLQDQNLVITANDQPVALAGVMGGEDTEVHEGTTNLILEAAVFSPVAIRRSARV 360 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 GI T+S R+ERG++ + + + LI L GGTA+ A T + R ++ Sbjct: 361 QGIRTESSTRYERGINQAELALACRRAILLISELAGGTATVQKSASGAT-QMRMTQEVSL 419 Query: 410 EVKRLSGI--------DVPIEDSLR------ILERLGFSVI---GEYDKFEVSVPSWRQ- 451 + RL+ I D +E L+ IL LG GE + V+VP +RQ Sbjct: 420 SLDRLNAILGPLKRGEDTEVESYLQPPEVESILTALGCGTSRQEGESVVWTVTVPPYRQR 479 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+E + DL+EE+ R+YG D+ S+ LP V L +++ R ++ + + E++ Sbjct: 480 DLEREIDLIEEVARLYGYDRF-SDTLPTQSVPGY--LPPEEAAKRDLRSAFRAAGLTELM 536 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++S + ++ G ++ I NP+ + S +RT +L GL+ A N++ E Sbjct: 537 HYSLVKQQ-------GDNQVVIANPLFVEYSALRTEMLSGLIDAFVFNLENGNGPLNGLE 589 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + ++ D G+ Y G G + S W + ++ + F+AK SV E Sbjct: 590 IGRIFRRD---GEVYQEEDAIAGVIGGDPSQGRWVNSGKDNP--MSWFEAKGVLESVWER 644 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 R ES HPGR+ + + + LG FG+ HP I L + FE L Sbjct: 645 LSLSVEYRQESDV-KMLHPGRTATLWLNGD-RLGIFGQLHPQIQREKELPEAVYLFEFRL 702 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTV 749 + + + K+ S P RDLAF V + L +IKN ++++ V + Sbjct: 703 PVLTAAITAKDYLKRPFQSYSTFPASDRDLAFFVADSVSVADLQKTMIKNGGKILESVDL 762 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD ++GK++ E ++S+A +++ + T D+DI L +I + +VK+ LRS Sbjct: 763 FDEYRGKNVPENQRSLAFRLVYRVGDRTLTDEDIEPLQQKIRDALVKEFQVSLRS 817 >gi|271967360|ref|YP_003341556.1| phenylalanine--tRNA ligase [Streptosporangium roseum DSM 43021] gi|270510535|gb|ACZ88813.1| Phenylalanine--tRNA ligase [Streptosporangium roseum DSM 43021] Length = 838 Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 257/867 (29%), Positives = 405/867 (46%), Gaps = 95/867 (10%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVE----- 53 MK LSWL++++D V+ +I D LT+ GL++E V + + + +VL++E Sbjct: 1 MKAPLSWLREYVDLPAVTAHEIADRLTAAGLKLEAVTSYGYDVKNVVVGEVLAIEELQGF 60 Query: 54 RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + P C +++ G+ ++VCGA N VG PG +P V RK G Sbjct: 61 KKPIRHC---QVEVGEAAPREIVCGATNFAVGDRVPVVLPGGVLP-GGFEVGARKTYGRM 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CSE+EL LSD+ A IM L P+G + + L L D +I++ +TP+ + +RG Sbjct: 117 SEGMICSERELGLSDEHAGIMVLAEGTPIGADVVELLGLRDDVIEMEITPDIGYALSIRG 176 Query: 174 IALDLVAA-GLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 +A + A L ++S P + S P I D + C F + V G + + Sbjct: 177 VAREAATAFDSAFLDPADVSPPAEAGPSYPASIA----DPTACDRFVLREVHGFDPSARS 232 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WMR RL G+R +S VD+TNYV L+ G P H FDA +++ + VRRA GE + L Sbjct: 233 PLWMRTRLTRAGVRPVSLAVDVTNYVMLETGQPLHAFDAGKLTGEIVVRRAEPGETLETL 292 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ +L P++++I S+AG +GG H D +TD+++E A + IAR + Sbjct: 293 DHVVRELHPEDILITDGSGAISMAGTMGGLHTEISDTSTDIVIEAAHFSASGIARESRRH 352 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 +++++ RFERGVD + + L+ L GGT + +P +I + Sbjct: 353 NLVSEASKRFERGVDRELPLYASWRAAQLLAELGGGTIQPGVTHAEVEVEPVRISIPSGH 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEY----------------DKFEVSVPSWRQDVE 454 R++G+ E +R LE++G +V+ D V+ PSWR D+ Sbjct: 413 PGRVAGVGYDRETVIRHLEQVGCTVVAGTVAPADELAAKLAVTGDDMLTVTPPSWRPDLT 472 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL EE++R+ G + + P L LS Q R V R LA+ +EV+ + Sbjct: 473 DPNDLAEEVIRLEGYENL---PSILPAAPAGAGLSESQRLRRRVGRALAASGYVEVLAYP 529 Query: 515 FISKE-----QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F+ + Q +R + + NP+S D MRT+LLPGLLK RNV R D A+ Sbjct: 530 FVGERDFDNLQLPAGDARRRAVRLANPLSEDEPLMRTTLLPGLLKTLVRNVGRGFGDVAL 589 Query: 570 FEVSHVYE--NDTPEGQKYM-------------------AAGIRKGS--------SGIEG 600 FE VY D P + A +R G+ SG G Sbjct: 590 FETGLVYRPSQDAPATAPVLGVDRRPTEEELASIEAALPAQPLRVGAVLAGEFERSGWWG 649 Query: 601 SGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 GR W+D E R V E V+LD +R + P +HPGR + Sbjct: 650 KGRAGTWADAVEA-ARTV-----------AREAGVTLD-VRADRHEP--WHPGRCAALY- 693 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK- 717 + ++++G+ GE HP +++ +GL E+ L + + S +P+ Sbjct: 694 AGDVLVGHAGELHPRVIEAYGLPARTSAMELELTRLESPSAGPVAAPAI----SAYPIAT 749 Query: 718 RDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 +D+A IVD P A + + L++ V +FDV+ G GEG+KS+A + + Sbjct: 750 QDVALIVDAATPVAAVEAALCEGAGDLLESVRLFDVYTGAQAGEGRKSLAYSLRFRAPDR 809 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T ++ D V ++T A LR Sbjct: 810 TLTAEEASAARDAAVALAGERTGAQLR 836 >gi|28211876|ref|NP_782820.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium tetani E88] gi|41018338|sp|Q891T8|SYFB_CLOTE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28204318|gb|AAO36757.1| phenylalanyl-tRNA synthetase beta chain [Clostridium tetani E88] Length = 791 Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 246/827 (29%), Positives = 418/827 (50%), Gaps = 60/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK WLKD+++ ++S ++ D LT G +VE++ + + + K+ +ER+PD D Sbjct: 1 MKVPFKWLKDYVNINISANELGDRLTLSGSKVEEIISSGDEIQNVVTGKIEKIERHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ GK + IQ+V GA N++ + A G+ +P N++ + K+RGI S GMM Sbjct: 61 KLVVCSVNIGKEEPIQIVTGANNMKEEDIVPVAVHGAVLP-NDVKIKKGKLRGIMSNGMM 119 Query: 119 CSEKELMLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSEKEL + + +M LP D +G + + L+L + +I+ +T NR DC+ V GIA + Sbjct: 120 CSEKELGMPESGVDGLMILPSDTAIGKDIKEVLDLDNAVIEFEITSNRPDCLSVVGIARE 179 Query: 178 LVAAGLG------KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 AA LG KL + +S+ +EI+ DL C+ + VK V+ +P Sbjct: 180 -TAATLGIKYTMPKLDYTPKNKANIKDSLEVEIRDDL-----CRRYMARGVKNVKIQESP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM++RL+ G+R+I+ +VDITN+V L+ G P H FD +I S+ + + + GEK L Sbjct: 234 EWMQERLEEAGVRAINNIVDITNFVMLELGQPLHAFDGRQITSNKIVIEKGKVGEKFATL 293 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E + + I R ++AGI+GG ++ ++T ++++E A +D NI S K L Sbjct: 294 DKVERTIDESVLCIKDGDRAVALAGIMGGLNSEVKEDTKEIILECANFDGTNIRVSSKKL 353 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMN 408 G+ T+S +FE+ +D + + + LI L G + I I +N K R + + Sbjct: 354 GLRTESSSKFEKDLDPNLVEIAMDRVCHLIEELDAGEVMEGTIDIYKN-PIKERNLKVDS 412 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + + G D+ ED L+RL E D ++VP++R D+ K D+ EEI RIYG Sbjct: 413 NWMNKFLGTDISKEDMKEYLDRLELKTDVEGDTLNITVPTFRSDIVLKQDVAEEIARIYG 472 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGG 526 + I + V + +L+Q V +L + + +++SF+S + +L Sbjct: 473 YNNIPT--TMFNSVSKRAGKTLKQHLEDKVVEILIGSGLNQSISYSFVSPKIFDKILIPK 530 Query: 527 G---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----EN 578 + ++I NP+ D S MRT+ L +++A RN R + +FE+ VY E Sbjct: 531 DNDLRNTVKIKNPLGEDYSLMRTTTLASMMEALSRNYSRNNSYARLFEMGKVYIPSQDEK 590 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS 637 PE + + G ++ + VD + K ++IE + S Sbjct: 591 VLPEERNTLVIG-------------MYGE--------VDYLNLKGILENLIEELNIEKSS 629 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + ES P+ +HPG++ + + E G GE HP++LD + + E+ LD + Sbjct: 630 YKRESEHPT-FHPGKTAKLYVNKEFA-GLLGEIHPDVLDNYDIDEKCYIAELNLD---VL 684 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 K KK L V RD+A +VD + + +II+N ++++DV +FDV++G Sbjct: 685 FKNANIEKKYKALPKFPAVDRDMALLVDDEVLVQDIESIIRNKGGKILEDVKLFDVYKGA 744 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKSVA ++ + T D ++ + D+IV + A LR Sbjct: 745 QIPEGKKSVAYSIVYRMPNRTLTDAEVNKVHDKIVRTLENNLGAELR 791 >gi|327469581|gb|EGF15050.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK330] Length = 801 Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 241/827 (29%), Positives = 432/827 (52%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPN+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNIGAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKLKEINISCPL------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +A + VAA K PL ++ES+ + + ++ +A ++ V Sbjct: 180 VAHE-VAAIYDKSVHFK-DFPLVENEKQAAESLSVAL-----ETEKAPYYAARILENVTI 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK Sbjct: 233 APSPQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEK 292 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ++ LD +E +L ++VI + ++AG++GG +T V++E A++D +I ++ Sbjct: 293 LVTLDGEERELEVSDLVITVADKPVALAGVMGGAATEISGQSTRVVLEAAVFDGKSIRKT 352 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 353 SGRLNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIASAGSLDTSDVEVV 412 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI R Sbjct: 413 SSLADVNRVLGTDLLYTDIVDVFRRLGFGLSGSAEQFTVSVPRRRWDISIEADLYEEIAR 472 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 473 IYGYDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAIEFT 530 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T + Sbjct: 531 LNPSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPK 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + + VD F AK V+E + L+ E Sbjct: 590 EDLPNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLKAEYA 642 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A + HPGR+ +I + + V G+ G+ HP + + E Y+ + +S + Sbjct: 643 ASNQIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGK 756 ++ + ++ V RD+A ++ I +++ I V RL D+ +FD+F G Sbjct: 696 EQLQPEQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGD 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q + + D+++ M++I +++++K A +R Sbjct: 755 KLGVGLKSMAYSLTFQNTESSLTDEEVAKYMEKIEKSLIEKLGAEVR 801 >gi|324990897|gb|EGC22832.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK353] Length = 801 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 244/825 (29%), Positives = 431/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVYFKDFPLVENEKQAGDSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ + ++ V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFGGG 527 D++ + LP + QQ R R R LA A + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLRRRV--RTLAEGAGLTEIITYALTTPEKAVEFTLN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ Sbjct: 533 PSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKED 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + + VD F AK V+E L E A Sbjct: 592 LPNEINSFAFALTG---LVNEKDFQTKPAAVDFFYAKG----VVEALFDKLGLTAEYAAS 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 + HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 645 NQIKSMHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQ 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSL 758 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G L Sbjct: 698 LQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 757 GVGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|116333646|ref|YP_795173.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus brevis ATCC 367] gi|116098993|gb|ABJ64142.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus brevis ATCC 367] Length = 802 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 241/823 (29%), Positives = 411/823 (49%), Gaps = 41/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + +W+K++LD DVS + + + +EV+ V + L + VLS+E +PD D Sbjct: 1 MKISYNWIKEYLDLDVSPVDLAEKIERTSVEVDGVTTPSDGLKKIVVGHVLSLEAHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A PGS I NN+ + K+RG+ S GM+ Sbjct: 61 HLHICQVDVGEDEPLQIVCGAPNVAAGQNVIVALPGSRI-ANNVKIKKSKMRGVPSAGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ ++D + I LP DA G + DYL ++D +ID+ +TPNR D + + Sbjct: 120 CALQEIGFAEDVVPKAYADGIYVLPTDATPGDDIYDYLGMNDSLIDLDVTPNRGDMLSLY 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G DL A +K + + +++ ++ +DD L + M VK V+ +P Sbjct: 180 GTLHDLAAIYDQPVKLEQPAVKEAGQAVADQLTVHVDDQ-LAPQYRMRLVKQVKLAPSPM 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKILAL 290 W++ RL G R I+ +VDITNY+ L G P H FD + + DV VR A +GE + L Sbjct: 239 WLQIRLWNAGYRPINNVVDITNYIMLKYGQPLHAFDYDKFAGQDVY-VRTAQTGESLTTL 297 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E++L P ++VIA + ++AG++GG + T V +E A+++ +I ++ + Sbjct: 298 DEGEHELDPQDIVIADEHAPIALAGVMGGLDTAISEGTVTVAIEAAVFEHDHIRKAAQRH 357 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKIVFMN 408 + TD+ RFERGV+ G+ L ++ L G + + A NI P I Sbjct: 358 HLHTDASQRFERGVNQAGVQEALDAAAQMMTELADGEVQSGTVVAAANIP-APAVITLTL 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S + + G + +E ILE LG +V + + V+VP R D+ ADL+EEI RIYG Sbjct: 417 SRINAVLGTTLAMEQVSHILESLGCTVAIDGETLTVTVPVRRNDIHIPADLLEEIARIYG 476 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 DQ+ + LP ++ L+ Q R +R L + + ++++ +++++ +F Sbjct: 477 YDQLPAT-LPTGRMT-MGALTPAQKLMRATRRSLEGLGLNQAISYALTTEDKANMFMMRA 534 Query: 529 RELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT--PEG 583 E L P+S D + +R +++ GLL N R + D A++E V+ E DT P Sbjct: 535 SEPTHLAWPMSVDHAVLRMNIITGLLDDIAYNTARKVKDVALYEQGRVFYREADTERPSE 594 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--E 641 ++++A I +G L ++ + VD + K + ++ + + Sbjct: 595 EEHIAGAI---------TGTLLPAAWDQPAKEVDFYQVKGIVAAYLKDMAVNGDVTYVAN 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S P HPGR+ I + G+ G+ HP + F + FE+ L +I I K+ Sbjct: 646 SDMPDM-HPGRTADILVHGHRI-GFMGQIHPTVAKQFKIGATYV-FELNLQAI-IDMPKQ 701 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGE 760 V+ S + RD+A +VD + ++ +I K + V +FDV+ G + + Sbjct: 702 ENQYDVI--SRYPAITRDIAMLVDNQVTNEQIMALIEKRGGAYLRSVKLFDVYDGVKVPK 759 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q T DD + D++ + + + A +R Sbjct: 760 GKKSLAYTLTYQDKNATLVDDAVNQAFDKVTQRLQDELGAEIR 802 >gi|293554033|ref|ZP_06674633.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] gi|291601815|gb|EFF32067.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1039] Length = 806 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 232/827 (28%), Positives = 427/827 (51%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGIAVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEILVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + K + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 355 TAKQFNLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G + +++ I E LGFS + + V VP R D++ +AD++EEI Sbjct: 415 KISLERINQYLGTSLVVKEVNEIFEALGFSYEEKDHVYSVVVPPRRWDIQIEADIIEEIA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F Sbjct: 475 RIYGYDQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTP 581 + + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END Sbjct: 533 VINESNITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP- 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + ++ ++ + I G +W +K + + + VD F K ++ E + + + Sbjct: 592 --RTHLPQEVKHAAIAISG---IWEEKDWQTKAQNVDFFTIKGLLENLFEQLGITEDIHY 646 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 647 QTVTEMKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAV 699 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGK 756 K +V ++ V RD+A +V + + L +I++ R + D+ +FDV+QG+ Sbjct: 700 VEAAQKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIQLFDVYQGE 759 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ +G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 760 NIEKGHKSMAYSLTFVNPEATLTDEEINKAMEKVEKALVENLEASIR 806 >gi|21910043|ref|NP_664311.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pyogenes MGAS315] gi|21904233|gb|AAM79114.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptococcus pyogenes MGAS315] Length = 786 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 236/811 (29%), Positives = 415/811 (51%), Gaps = 58/811 (7%) Query: 21 ICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGA 79 + + +++ G+EVE ++ E LS + VLS E P+ + ++DTG Q+VCGA Sbjct: 6 LAEKMSTTGIEVEGIEVPAEGLSKLVVGHVLSCEDVPETHLHLCQVDTGDETPRQIVCGA 65 Query: 80 PNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD------SASI 133 PNV+ G+ + A PG+ I +N I KIRG+ES GM+CS +EL LSD S I Sbjct: 66 PNVKAGIKVIVAVPGARIADNYKIKK-GKIRGMESLGMICSLQELGLSDSIIPKEFSDGI 124 Query: 134 MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL-----KE 188 LP +A G + YL+L D II++S+TPNR+D + +RG+A + VAA GK K Sbjct: 125 QILPDEAVPGDAIFKYLDLDDHIIELSITPNRADALSMRGVAHE-VAAIYGKSVSFPEKN 183 Query: 189 INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISA 248 + S +SE+I + I D+ L +A V+ V+ +P W++ L G+R I+ Sbjct: 184 LQESDKATSEAIEVAIA---SDNVLT--YASRVVENVKVKPSPQWLQNLLMNAGIRPINN 238 Query: 249 LVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKILALDNQEYDLSPDNVVIASD 307 +VD+TNYV L G P H FD + D V RA GE ++ LD ++ +L+ +++VI Sbjct: 239 VVDVTNYVLLYFGQPMHAFDYDKFEDHKIVTRAARQGESLVTLDGEKRELTTEDLVITVA 298 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 + ++AG++GG+ D N+ V++E A++D +I ++ L + ++S RFE+GV+ Sbjct: 299 DKPVALAGVMGGQATEIDANSQTVVLEAAVFDGKSIRKTSGRLNLRSESSSRFEKGVNYA 358 Query: 368 GMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR 426 ++ L +++ L G S A ++ +P ++ V G ++ D R Sbjct: 359 TVLEALDFAAAMLQELAEGQVLSGHVQAGQLSTEPVEVSTNLDYVNVRLGTELTFADIQR 418 Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE--- 483 I +LGF + G+ +F V+VP R D+ ADLVEEI RIYG D+ LP T E Sbjct: 419 IFNQLGFGLTGDETRFTVAVPRRRWDISIPADLVEEIARIYGYDK-----LPTTLPEAGG 473 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-EILNPISADMS 542 L+ Q+ R V+ + + E+++++ + E+++ F L E++ P+S + S Sbjct: 474 TAAELTPTQALRRKVRGLAEGLGLTEIISYALTTPEKAIEFAVAPSHLTELMWPMSVERS 533 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN------DTPEGQKYMAAGIRKGSS 596 +R +++ G+L NV R ++ A++E+ ++E D P + A I Sbjct: 534 ALRQNMVSGMLDTVAYNVARKQSNLALYEIGKIFEQEVNPKEDLPNEVNHFAFTI----- 588 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G + + + + VD + AK L + ++L + + HPGR+ +I Sbjct: 589 ----CGLVAQKDFQTQAQAVDFYHAKG-ILDTLFANLNLKVQYVPTKDLANMHPGRTALI 643 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKRTKTKKVVHLSSLH 714 E V+G+ G+ HP + + E Y+ + ++ + + ++ Sbjct: 644 LLD-EQVIGFVGQVHPGTAKAYSIP------ETYVAELDMAALEAALPSDQTFAEITKFP 696 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + RD+A ++D+ + +V I++ V RL + +FDV++G ++ GKKS+A + Q Sbjct: 697 AMTRDIALLLDREVSHQAIVTAIESAGVKRLT-KIKLFDVYEGATIQAGKKSMAYSLTFQ 755 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D D+++ M++I + + ++ A +R Sbjct: 756 NPNDNLTDEEVAKYMEKITKALTEQVGAEVR 786 >gi|225868734|ref|YP_002744682.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] gi|225702010|emb|CAW99590.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus equi subsp. zooepidemicus] Length = 801 Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 237/826 (28%), Positives = 423/826 (51%), Gaps = 48/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK +D DVS ++ + +++ G+EVE + + E LS + ++S + P+ Sbjct: 1 MLVSYKWLKKLVDIDVSPAELAEKMSTTGIEVEGITSPSEGLSKLVVGHIVSCDAVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++TG + Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVNTGDDELRQIVCGAPNVKAGINVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDAIIPKDFSEGIQILPETATAGDSIFPYLDLDDNIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +++S+ + I DS +A ++ V Sbjct: 180 VAHE-VAAIYGKSVSFPEKTLIESAKAAADSLEVAI-----DSDKVLTYASRIIEHVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD +D L R A GE++ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDTFADHKLLARDAREGERL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L+ D++VI + ++AGI+GGK ++ V++E A+++ +I ++ Sbjct: 294 VTLDGEERVLTTDDIVITVADQPVALAGIMGGKSTEISTSSKTVVLEAAVFNGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+G++ ++ L +++ L GGT + A ++ P ++ Sbjct: 354 SRLNLRSESSSRFEKGINHDTLVEALDFAAAMLEELAGGTVLAGRLQAGSLPTDPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G + D I RLGF + G + F VSVP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTALTFADVEGIFARLGFGISGTAEHFTVSVPRRRWDITIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA----MMEVVNWSFISKEQSV 522 YG D+ LP T + + + + ++T+ ++R L A + E+++++ + E+++ Sbjct: 474 YGYDR-----LP-TTLPEAAGTAAELTKTQALRRQLRGLAEGLGLTEIISYTLTTPEKAL 527 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 F +L E++ P+S + S +R S++ G+L NV R + A++E+ V+E Sbjct: 528 EFAMKPSQLTELMWPMSVERSVLRQSMVSGMLDTLAYNVARQQHNLAVYEIGKVFEQ--- 584 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 EG A +G + + + + VD + AK + + +S+D + Sbjct: 585 EGNPKEALPTELNHFAFAITGLVADKDFQTQAQAVDFYHAKGILECLFDKLGLSVDYIPT 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 + A HPGR+ I+ + V+G+ G+ HP + + E Y+ + ++ + Sbjct: 645 KEMAS--MHPGRTARIQLGDQ-VIGFVGQVHPQAAKAYHIP------ETYVAELDLTAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 V ++ + RD+A +VD +++ I + + + ++ +FD++ G + Sbjct: 696 AALPAHHAFVEITKYPAMVRDIALLVDASTSHQAILSAITSAKVKRLTEIKLFDIYAGAT 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + GKKS+A + Q D D+++ M++I + +V+K A +R Sbjct: 756 IAAGKKSMAYSLTFQNPTDNLTDEEVAGYMEKITKALVEKVGAEVR 801 >gi|257878160|ref|ZP_05657813.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257881056|ref|ZP_05660709.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257889641|ref|ZP_05669294.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257892419|ref|ZP_05672072.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260559207|ref|ZP_05831393.1| phenylalanyl-tRNA synthetase [Enterococcus faecium C68] gi|293563133|ref|ZP_06677598.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|294623305|ref|ZP_06702167.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] gi|314939886|ref|ZP_07847092.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] gi|314943733|ref|ZP_07850472.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|314949689|ref|ZP_07853007.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] gi|314953235|ref|ZP_07856174.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|314993685|ref|ZP_07859033.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|314997398|ref|ZP_07862349.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|257812388|gb|EEV41146.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,230,933] gi|257816714|gb|EEV44042.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,502] gi|257826001|gb|EEV52627.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,410] gi|257828798|gb|EEV55405.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,408] gi|260074964|gb|EEW63280.1| phenylalanyl-tRNA synthetase [Enterococcus faecium C68] gi|291597273|gb|EFF28462.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium U0317] gi|291604911|gb|EFF34380.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1162] gi|313588533|gb|EFR67378.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a01] gi|313591859|gb|EFR70704.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133B] gi|313594701|gb|EFR73546.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133A] gi|313597596|gb|EFR76441.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133C] gi|313640849|gb|EFS05429.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0133a04] gi|313643947|gb|EFS08527.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium TX0082] Length = 806 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 232/827 (28%), Positives = 427/827 (51%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE V E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGVTVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEIFVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + K + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 355 TAKQFNLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ Sbjct: 415 KISLERINQYLGTSLVVKEVNEIFEALGFSYEEKEYVYSVVVPPRRWDIQIEADIIEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F Sbjct: 475 RIYGYDQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTP 581 + + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END Sbjct: 533 VINESNITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP- 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + ++ ++ + I G +W +K + + + VD F K ++ E + + + Sbjct: 592 --RTHLPQEVKHAAIAISG---IWEEKDWQTKAQNVDFFTIKGLLENLFEQLGITEDVHY 646 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 647 QTVTEMKEMHPGRTAAIYL-GEKFIGFVGQVHPTITKSYDIP------ETYVAEFDLSAI 699 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGK 756 K +V ++ V RD+A +V + + L +I++ R + D+ +FDV+QG+ Sbjct: 700 VEAAQKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIQLFDVYQGE 759 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ +G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 760 NIEKGHKSMAYSLTFVNPEATLTDEEINKAMEKVEKALVENLEASIR 806 >gi|308174560|ref|YP_003921265.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens DSM 7] gi|307607424|emb|CBI43795.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens DSM 7] gi|328554483|gb|AEB24975.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens TA208] gi|328912887|gb|AEB64483.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus amyloliquefaciens LL3] Length = 804 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 235/826 (28%), Positives = 416/826 (50%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLQGIDPAVLAEKITRAGIEVEGIEYKGEGVKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G + +Q++CGAPNV G A G+ +P N + K+RG S Sbjct: 61 DKLNKCLV---DIGAEEPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEAS 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 HGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGADAMAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K S ++E + ++D+ +A +K V+ Sbjct: 177 MNMLGVAYEVAAILGAEVKLPETSYETAAEKAADAVSVKIEDTQANPHYAAKIIKNVKIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENETI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD QE LS ++VI + + Q++AG++GG + ++TT +L+E A +D + ++ Sbjct: 297 VTLDEQERKLSSSHLVITNGKKAQAVAGVMGGAESEVREDTTSILLEAAYFDGQTVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVF 406 ++LG+ +++ R+E+G+D ++ + SLI + GG + N + + I Sbjct: 357 RDLGLRSEASARYEKGIDPARVLLAAERACSLIQAYAGGEVLSGTVEENHLKIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ + I +RLGF+V D V+VPS R D++ + DL+EE R+ Sbjct: 417 SVEKVNAVLGMTIAKEEIISIYKRLGFAVGEAEDVLVVTVPSRRGDIKIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + +S + +++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQATTYSLTNDKKAAAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL+A N+ R A++E V+ E +T Sbjct: 535 EKSFNTMLALPMSEERSILRHSLVPNLLEAVSYNLARQTDSVALYETGSVFLTKEENTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +K AG + G R LW + + VD F K ++ D + F Sbjct: 595 VEKERVAG------AVTGLWRKNLWQGEK----KPVDFFVVKGIVEGLLHQLNVSDRIEF 644 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ I + + G+ G+ HP + + E Y+ + + Sbjct: 645 VQSERKNMHPGRTANILLNGSLA-GFIGQVHPAMEKELDIK------ETYVFELDLHALL 697 Query: 701 RTKTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 +T+ +V+ + +P V RD+A + D+ + +G L +IK+ L+ +VTVFDV++G+ Sbjct: 698 TEETEPLVYTAIPKYPSVTRDIALVADKTVTSGQLEAVIKDAGGALLKEVTVFDVYEGEH 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKSVA + + T ++++ + + +++ + + AVLR Sbjct: 758 MEEGKKSVAFSLQYVNPEQTLTEEEVTKVHENVLKALEETYQAVLR 803 >gi|53713856|ref|YP_099848.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides fragilis YCH46] gi|66773892|sp|Q64T65|SYFB_BACFR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|52216721|dbj|BAD49314.1| phenylalanyl-tRNA synthetase beta chain [Bacteroides fragilis YCH46] Length = 820 Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 249/834 (29%), Positives = 419/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDAVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQAALTRPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA++I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDANKIKGGEVIVKTMPEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C A + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCAAPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P E I+ L ++ E + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPAETIKSIVTSLEMKIMDETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++ + + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L SL + + Y + + T L FG +L F + N EVY Sbjct: 654 DLHSLVVGNLSDDIYSTALT--VNTKGGKRLATFGVVTKKMLKAFDVDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|126435567|ref|YP_001071258.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium sp. JLS] gi|126235367|gb|ABN98767.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium sp. JLS] Length = 832 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 251/838 (29%), Positives = 414/838 (49%), Gaps = 84/838 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL++ + +VS E++ TL IG EVE V ++ P T+ +V +E Sbjct: 1 MRLPYSWLREVVSAGAPGWNVSAEELEQTLIRIGHEVEDVLPVGPVTGPLTVGRVAEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I +++D G+ + +VCGA N VG L V A PG+ +P + + RK G Sbjct: 61 LTEFKKPIRAVKVDVGEPENRDIVCGATNFAVGDLVVVALPGATLP-GDFTIATRKTYGR 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL L D + I+ LP A G ++ L L D + D+++TP+R C+ V Sbjct: 120 TSDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGLDDTVFDLAITPDRGYCLSV 179 Query: 172 RGIA--------LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 RG+A LD V E + P+ E++P+ I D + F + V Sbjct: 180 RGMAREIACAYDLDYVDPAFDP--ERVPALPVEGEALPVAI----DPGTGVLRFGLRPVT 233 Query: 224 GV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ V+P WM++RL G+R+IS VD+TNYV L+ G+P H D S I+ VR A Sbjct: 234 GIDPAAVSPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAE 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE ++ LD+ E L P +V+I D +I G++G + TTDVL+E A+WDP Sbjct: 294 PGETVVTLDDIERRLDPADVLIVDDEATAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAA 353 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNI 397 ++R+ + L + +++ R+ER VD + L +L+ + GG Sbjct: 354 VSRTQRRLRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVEPRLTDWRGDPPRE 413 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 + P + R +G+D P + R L ++G V + D+ PSWR D+++ A Sbjct: 414 DWSPPPVSMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIKQPA 473 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DLVEE+LR+ G++QI S L R L+ Q R R + + LA +E++ F+ Sbjct: 474 DLVEEVLRLEGLEQIPSV---LPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLP 530 Query: 518 KEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 ++G + ++LNP+ AD ++ T+LLPGLL+A RNV R AD A+F + Sbjct: 531 AGVFDVWGLADDDPRRATTQVLNPLEADRPHLATTLLPGLLEALARNVSRGAADAALFAI 590 Query: 573 SHVYE------------NDT--------------PEGQKYMAAGIRKGSSGIEGSGRLWS 606 + V E ND P +++ A + +G+ W Sbjct: 591 AQVVEPTEDTRAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVL----TGLREPAGPWG 646 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 R R V+ DA + + ++ ++ +LR P +HPGR + + V+G Sbjct: 647 -----RGRPVEAADA-FEMVRIVGRAAEVEFTLRSAQRLP--WHPGRCAEVLIG-DTVVG 697 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + G+ HP +++ GL C E+ LD++PI+++ +S V +D++ IVD Sbjct: 698 HAGQLHPAVVERAGLPKGTCAVELDLDAVPITER-----LPAPRVSPFPAVFQDVSLIVD 752 Query: 726 QHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + A ++V +++ L++DV +FDV+ G +GEG+KS+A+ + + T +D+ Sbjct: 753 DDVAAQSVVEAVRSGAGELLEDVRLFDVYTGPQIGEGRKSLALALRFRAADRTLTEDE 810 >gi|218262490|ref|ZP_03476936.1| hypothetical protein PRABACTJOHN_02614 [Parabacteroides johnsonii DSM 18315] gi|218223338|gb|EEC95988.1| hypothetical protein PRABACTJOHN_02614 [Parabacteroides johnsonii DSM 18315] Length = 820 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 255/843 (30%), Positives = 423/843 (50%), Gaps = 63/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLKD+LD D+ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKDYLDFDLQPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGAEPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DA VG +Y + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPADAVVGTPAKEYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K N+ P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPANLKRPNVDAFKIDDETPAIEVV--VENTEACLRYSGITIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RLK +GLR I+ +VD+TNY+ G P H FDA ++ + + VR A G Sbjct: 239 VKESPEWLQNRLKVIGLRPINNVVDVTNYILHGVGQPLHSFDADKVKGNKVVVRSAKEGS 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + IAG+ GG +G ++T +V +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIAGVFGGLDSGVTEHTKNVFLESATFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKP 401 + + G+ TD+ +R+ERG+D + V+K LI + GGT + DI A P Sbjct: 359 TARRFGLNTDASFRYERGLDPNQTVDVMKRAALLIQEVAGGTITGAIQDIYPA---PVAP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 ++ ++V L G +P+E ILE L ++ E + + + VP +R DV+ D++ Sbjct: 416 YRVELAYNKVNTLIGKVIPVETVKSILESLEMKIVSETAEGWVIDVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK------RVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R K L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSYKLQNLISEQLCGCGFNEILNNS 529 Query: 515 FISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + + ++NP+SAD++ MR +LL G L++ N R + Sbjct: 530 LT---RSAYYDNLSTYPVSHCVMLMNPLSADLNCMRQTLLFGGLESVEHNAKRKNGNIRF 586 Query: 570 FEVSHVYE---NDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAK 622 FE + Y+ + EG+ +A G+ SG W+ +E+ +++ K Sbjct: 587 FEFGNCYDYNIDHKKEGET-LAEFSEDYRLGLWVSGSRVDNNWAHPNEKSS----VYELK 641 Query: 623 ADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 A +++ V+L + F + A Y G S I TS+ LG G P I + Sbjct: 642 AYVENILVRLGVNLQKVIFGNLANDIYSAGLS--ITTSSGRQLGTMGIVSPKICKELDIE 699 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + E+ ++ + + K++K +S VKRDLA ++D+++ + I + Sbjct: 700 TDVYYAELSW-TLLMKEIKKSKV-TFSEISKFPAVKRDLALLLDKNVQFAEIEKIATESE 757 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 R L+ ++ +FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K A Sbjct: 758 RKLLKNIALFDVYEGKNLPAGKKSYAVSFYLQDEGKTLNDKQIDAIMKKIQTNLEQKLGA 817 Query: 801 VLR 803 LR Sbjct: 818 QLR 820 >gi|56421241|ref|YP_148559.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus kaustophilus HTA426] gi|66773844|sp|Q5KWE5|SYFB_GEOKA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56381083|dbj|BAD76991.1| phenylalanyl-tRNA synthetase beta subunit [Geobacillus kaustophilus HTA426] Length = 804 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 241/823 (29%), Positives = 432/823 (52%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WL +++D T ++ +++ + +T G+EVE+V+ + + I VL E +P+ Sbjct: 1 MLVSYRWLGEYVDLTGITAKELAERITKSGIEVERVEALDRGMKGVVIGHVLECEPHPNA 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D LR +D G+ + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DK--LRKCLVDLGEDEPVQIICGAPNVAKGQKVAVAKVGAVLP-GNFKIKRAKLRGEESN 117 Query: 116 GMMCSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL + + + I P DAP+G ++L L D ++++SLTPNR+DC+ Sbjct: 118 GMICSLQELGVETKVVPKEYADGIFVFPSDAPIGADAIEWLGLHDEVLELSLTPNRADCL 177 Query: 170 GVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + G+A + VAA LG+ +K + +SE + I ++ +A VK VR Sbjct: 178 SMIGVAYE-VAAILGRDVKLPEAAVKENSEHVHEYISVRVEAPEDNPLYAGRIVKNVRIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I Sbjct: 237 PSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAGETI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ E L+ +++VI + ++AG++GG ++ D+TT V +E A + I ++ Sbjct: 297 ITLDDVERKLTEEHLVITNGREPVALAGVMGGANSEVRDDTTTVFIEAAYFTSPVIRQAV 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 K+ G+ +++ RFE+G+D L+ +L+ GG + ++ + +V + Sbjct: 357 KDHGLRSEASTRFEKGIDPARTKEALERAAALMSEYAGGEVVGGIVEASVWRQDSVVVTV 416 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 E + + G + E+ IL L F + F + VPS R+D+ + D++EE+ R+ Sbjct: 417 TLERINGVLGTAMSKEEVAAILSNLQFPFTEDNGTFTIHVPSRRRDIAIEEDIIEEVARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D++ + LP+ + + L+ Q++ R V+R L + + + +S S +++ F Sbjct: 477 YGYDRLPAT-LPVAEAKPG-GLTPYQAKRRRVRRYLEGAGLFQAITYSLTSPDKATRFAL 534 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A N R + + A++E+ VY E+ P Sbjct: 535 ETAEPIRLALPMSEERSVLRQSLIPHLLEAASYNRARQVENVALYEIGSVYLSKGEHVQP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + + AG+ G LW + + D + AK + + F + ++ Sbjct: 595 AENERL-AGVLTGL----WHAHLWQGEK----KAADFYVAKGILDGLFDLFGLAARIEYK 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ I + V+G+ G+ HP + + L FE+ L + ++ + Sbjct: 646 PAKRADLHPGRTAEIALGGK-VIGFVGQLHPAVQKEYDLKETYV-FELALTDLLNAESEA 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 + + + S V RD+A +VD+++ AG L I+ + L+ DV++FDV++G L + Sbjct: 704 IRYEPIPRFPS---VVRDIALVVDENVEAGALKQAIEEAGKPLVKDVSLFDVYKGDRLPD 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ + +R++ V K+ AVLR Sbjct: 761 GKKSLAFSLRYYDPERTLTDEEVAAVHERVLAAVEKQFGAVLR 803 >gi|294811654|ref|ZP_06770297.1| Phenylalanyl-tRNA synthetase beta chain [Streptomyces clavuligerus ATCC 27064] gi|326440162|ref|ZP_08214896.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces clavuligerus ATCC 27064] gi|294324253|gb|EFG05896.1| Phenylalanyl-tRNA synthetase beta chain [Streptomyces clavuligerus ATCC 27064] Length = 842 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 260/832 (31%), Positives = 394/832 (47%), Gaps = 95/832 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 M+ LSWL++++D VS + L + GLEVE V+ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPVSETGRDVQAKLIAAGLEVEAVERLGAGLTGPLVVGRVLTIEELT 60 Query: 57 DLDCAI--LRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 D I +D TG QEI +CGA N VG V A PG+ +P I RK Sbjct: 61 DFKKPIRFCTVDVGPANGTGAPQEI--ICGARNFAVGDKVVVALPGAVLPGEFRIAE-RK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP + VG ++ LEL D ++D+++TP+R Sbjct: 118 TYGRMSRGMICSGDELGMGDDGSHGIIVLPPEYEVGIDAAELLELYDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 C+ +RG+A + +A GL + P + L + D C F V G+ Sbjct: 178 CLSLRGVARETAIAYGLPLRDPALLDVPGPNG---LGHPVQVADPIGCDRFTARTVTGLD 234 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 +P W+R+RL+ G+R +S VD+TNYV L+ G P H +D + + VRRA GE Sbjct: 235 PEAHSPIWLRRRLQKAGMRPVSLAVDVTNYVMLELGQPLHAYDRGSVQGAIGVRRAEPGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD-----------NTTDVLVE 334 K+ LD L ++VI D +AG++GG + D TTDV+VE Sbjct: 295 KLTTLDGVARVLDAADLVITDDRGPIGLAGVMGGANTEIADAVADPETGQVRGTTDVVVE 354 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA 394 A +DP+ IAR+ + + +++ RFERGVD + V L++ L GGTA Sbjct: 355 SAHFDPVAIARTARRHKLSSEASKRFERGVDPLAGAAAAQRTVDLLVLLAGGTAEPGVTQ 414 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + PR I R++G+ E +R L+ +G V G+ D+ V+VPSWR D+ Sbjct: 415 VSSPSAPRTITMAADHPDRVAGVAYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLG 473 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 DL EE+LR+ G + + P L + R L+ +Q R + R LA +E N+ Sbjct: 474 APNDLAEEVLRLEGYENL---PATLPRPPAGRGLTERQRTHRRIGRALAGAGYVETPNYP 530 Query: 515 FISKE---QSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 FIS++ Q L +R + ++NP+S + +RT+LLPGLL A RNV R D A+ Sbjct: 531 FISEQVLDQLDLAADDPDRRVVRLVNPLSDEEPALRTTLLPGLLGALRRNVGRGGHDLAL 590 Query: 570 FEVSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEG 600 FE V+ PE ++ A G R+ SG G Sbjct: 591 FETGLVFHPLAEPRTAAVLPVDRRPTDEEIAGLNAALPEQPRHAAVVLTGERE-RSGWWG 649 Query: 601 SGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 GR W+D E A+ A P ++ E +HPGR + T Sbjct: 650 KGRPADWADAVEA---------ARTVARETGAPLLA------EQAQYGPWHPGRCAALVT 694 Query: 659 ---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 + G+ GE HP ++ GL C EV LD + ++ T + +S+ Sbjct: 695 FVDGEKRTAGHAGELHPRVIKALGLPARTCAMEVDLD---LLERAAEGTLEAPRISTFPV 751 Query: 716 VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +D+A +VDQ +PA + + + L++ + +FD++ G +G GKKS+A Sbjct: 752 ATQDVALVVDQAVPAAFVEHQLTLGAGELLESIRLFDIYTGDQVGPGKKSLA 803 >gi|253565818|ref|ZP_04843273.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 3_2_5] gi|251946097|gb|EES86504.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 3_2_5] Length = 820 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 248/834 (29%), Positives = 419/834 (50%), Gaps = 45/834 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGNGEPTQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA G DY + SD +++V +TPNR+D Sbjct: 121 SIGMICAEDEIGIGTSHDGIIVLPEDAVPGTLAKDYYNVKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKQAALTRPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA++I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDANKIKGGEVIVKTMPEGTTF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDGVERKLNERDLMICNKEDAMCIAGVFGGLDSGSTEATTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERG+D I LK ++ L GGT S D+C + Sbjct: 361 RRHGLNTDASFRFERGIDPNITIYCLKLAAMMVKELAGGTISSEIKDVCATPAQDF---- 416 Query: 404 IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 IV + E V L G +P+E I+ L ++ E + ++VP +R DV+ D++E Sbjct: 417 IVELTYEKVHSLIGKVIPVETIKSIVTSLEMKIMDETAEGLTLAVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + V L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPSTLKSSLTTKGDCDKSNKLQNLVAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + +LNP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCY 593 Query: 577 ENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 D + +K +A G+ +G++ S+ +++ KA ++ + + Sbjct: 594 HFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGL 653 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L SL + + Y + + T L FG +L F + N EVY Sbjct: 654 DLHSLVVGNLSDDIYSTALT--VNTKGGKRLATFGVVTKKMLKAFDVDN-----EVYYAD 706 Query: 694 IPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 + + K ++ KV + +S VKRDLA ++D+ + + I + +L+ +V++ Sbjct: 707 LNWKELMKAIRSVKVSYKEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVSL 766 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 767 FDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|293376348|ref|ZP_06622585.1| phenylalanyl-tRNA synthetase, beta subunit [Turicibacter sanguinis PC909] gi|325843428|ref|ZP_08167986.1| phenylalanine--tRNA ligase, beta subunit [Turicibacter sp. HGF1] gi|292645037|gb|EFF63110.1| phenylalanyl-tRNA synthetase, beta subunit [Turicibacter sanguinis PC909] gi|325489350|gb|EGC91724.1| phenylalanine--tRNA ligase, beta subunit [Turicibacter sp. HGF1] Length = 805 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 243/826 (29%), Positives = 424/826 (51%), Gaps = 45/826 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M +++WL +++ +D+ +++ + +T G+EVE V+ + I VL ++P+ D Sbjct: 1 MLVSVNWLNQYVNISDIDPKELAERITRTGIEVESVNILSDATNIVIGHVLERVQHPNAD 60 Query: 60 -CAILRIDTGKHQEI-QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D G + + Q+VCGA NV G + A PG+ +P N + K+RG ES GM Sbjct: 61 KLSVCQVDVGGEEGVLQIVCGAKNVAAGQKIIVAKPGAVLP-GNFKIKRSKLRGEESNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS KEL + + I DAPVG +YL+ +D +I++ LTPNR DC+ + Sbjct: 120 CCSLKELGIEQKLVPTAYAEGIFVCADDAPVGMDALEYLKFNDTVIELGLTPNRMDCLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K +S +E+ IK ++ + VK V +P Sbjct: 180 YGVAYEVGAILSREVKFEEVSVNEVAEAAKDLIKVT-SNTEKSPAYLTRVVKNVEIKESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L A G+R + +VD+TN+V L+ G P H FD I S + VR A +GE I L Sbjct: 239 QWLQAMLIAAGMRPKNNVVDVTNFVMLEMGQPLHAFDYETITSKEIVVREAVNGETIKTL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D Q+ +L +++I +DG+ +IAG++GG++ D T VL+E A++D + + ++ Sbjct: 299 DGQDRELVEGDIII-TDGKTPIAIAGVMGGENTEVTDETKTVLLESAMFDRLQVRKTATR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIVFMN 408 LG+ +++ RFE+G+D Q + L SL+ L G +A + I Sbjct: 358 LGLRSEASARFEKGIDPQRVELALNRAASLLAELANGEVCQGIVADDRFELTAVDIEITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ + G ++ ++ I RL F+ + F V VPS R D+ DL+EE RIYG Sbjct: 418 EKINSVLGTNMSTDEVASIWSRLQFTYDLNGEVFTVHVPSRRLDITIVEDLIEEAGRIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF---- 524 D+I + LP T ++ + +Q R R L + + +V+ +S S+E++ F Sbjct: 478 YDKIPT-TLPSTDIKGGYS-PIQLVRNR-AHETLKACGLTQVITYSLTSEEKATQFLSLP 534 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 + +++ P+S + + +R S +PGLL+ N R +A+ AI+E+ VY E D Sbjct: 535 ADVKETVKLSMPMSEERAYLRQSTIPGLLEVVRYNNARTMANVAIYEIGKVYGQTEGDYV 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 E K A +G+L +K + + VD F AK +++ L+ Sbjct: 595 EETKISGA----------VTGQLIQNKWQGKVENVDFFVAKGYVETLLTEMGHLNVTYRP 644 Query: 642 SGAPSW--YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 A + +HPGRS ++ + ++ +G G+ HP + L N FE+ LD++ Sbjct: 645 VDATEYKDFHPGRSAVVLVN-DVTVGVVGQVHPALQQELDL-NETYVFELSLDAL----Y 698 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKS 757 +K + + HP + RD+A +V++ + A LV IK ++L+ V VFD+++GK Sbjct: 699 GLETSKPGYEIIAKHPGMTRDIALVVNREVLADDLVQTIKKAANKLLQTVEVFDIYEGKG 758 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKSVAI + + T D+D++ ++++ + + +AVLR Sbjct: 759 VEEGKKSVAISLYYLDREKTLTDEDLQPTHQKVLDALTAEHDAVLR 804 >gi|262091706|gb|ACY25296.1| phenylalanyl-tRNA synthetase beta subunit [uncultured actinobacterium] Length = 789 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 249/828 (30%), Positives = 410/828 (49%), Gaps = 67/828 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +L+WL + D I D LT +GL VE V++ A + KVL +E++PD Sbjct: 1 MKISLAWLNEFADFGTDTNVISDRLTELGLAVESVEHVGAPVKGVVTAKVLRLEKHPDA- 59 Query: 60 CAILRI--DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + R+ D G E V CGA N+ G + A G+ +P+ +++ R I GI+S GM Sbjct: 60 AKVTRVFVDAGDGIERHVWCGATNMSEGDIVPLATLGTSMPDGR-VISQRGILGIDSEGM 118 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIAL 176 +CS E+ LS D + ++ LP + P+G + + + + SD I D+ +T NR DC G G+A Sbjct: 119 LCSGTEIGLSQDDSGLLILPSNTPLGIDVYEAMGVQSDVIFDLDVTRNRPDCTGYLGVAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 DL AAGL K+ C S I L + ++ C F + + G+ +P Sbjct: 179 DL-AAGLAKI------CKQPSSEIGKLGPRLTVPVQIEAPECCSRFTVVAMSGIVVTKSP 231 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +W+ QRL G+RSI+ +VD++N V+L+ P+H +D +SD VR A S E LD Sbjct: 232 SWIEQRLSRAGMRSINNVVDVSNLVNLELNQPNHAYDLQSVSDGFIVRMANSKESFTTLD 291 Query: 292 NQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 E L ++VIA + +AGI+GG H+ +T + +E+A ++P I + L Sbjct: 292 GNERILEESDLVIADAKNTAVGLAGIMGGLHSEVTASTHSIALEIAYFEPNAIRSTATRL 351 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-----GGTASDICIARNITYKP--RK 403 + T++ RFERGVD G + L+ C G +D+ R + P +K Sbjct: 352 ALRTEASLRFERGVDPYGAEAAVARFAELLSITCPELVVHGGFTDV---RTESLPPQNQK 408 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVE 461 V + VKR+ G+ + + +L +GF VI + F++S+PSWR D + D++E Sbjct: 409 CVLRATSVKRILGVYMTTQQIADLLTPIGFGVIEVNGGESFQISIPSWRNDCTLEIDVIE 468 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 EI R YG D++ + +P + V + LS Q R R V+ ++ S E + F++ + Sbjct: 469 EIARHYGYDKL-GKIVPTSPVHGR--LSEMQQRRRLVREIVVSLGASEAMPNPFLAPGEL 525 Query: 522 VLFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 G + L + NP+ A+ S +RTSL+PG+LKA N D ++FE+ HVY Sbjct: 526 AKVGLAEENALRLANPLVAEESVLRTSLIPGMLKAVSYNQSHRNRDISLFEIGHVY---- 581 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSL 638 P+G + + D+ E C V DA A D S + +S+ + Sbjct: 582 PQGTQVL------------------PDEFESLCIMVAGADASAAVDLWSQLSAGLSVGAQ 623 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 + P YH RS ++ ++VLG GE P +L FG+ + EV L S+ +++ Sbjct: 624 LSQDTPPDGYHQTRSAQLR-RGKVVLGAIGEIDPTVLANFGVVGRVACVEVNL-SLLLAE 681 Query: 699 KKRTKTKKVVHLSSLHPVKR-DLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGK 756 + + V S +P DLA + + + T+ I+ ++ DV++FDV++GK Sbjct: 682 TPKPVAAQFV---SKYPSSDFDLALVAPEKVSTSTIQKAIRQAAGNIVVDVSLFDVYRGK 738 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + +S+A ++ +Q T + ++ + + +K A LRS Sbjct: 739 GVPDDSRSLAFRIRLQASDRTLTEAEVVEARAKCIA-AAEKNGATLRS 785 >gi|332982290|ref|YP_004463731.1| phenylalanyl-tRNA synthetase subunit beta [Mahella australiensis 50-1 BON] gi|332699968|gb|AEE96909.1| phenylalanyl-tRNA synthetase beta subunit [Mahella australiensis 50-1 BON] Length = 795 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 244/822 (29%), Positives = 401/822 (48%), Gaps = 47/822 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK LSWLKD +D DV LE D +T G +VE V+ ++ + +++ ++P+ D Sbjct: 1 MKVPLSWLKDFVDIDVPLEDFVDRMTMSGSKVEAVEQLGGEINNVVVGRIIERHKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+V A N+ G A G+ + + + K+RG S GMM Sbjct: 61 RLQVCQVDIGGST-VQIVTAADNIETGDYIPVALHGADL-VGGVKIKRGKLRGEVSEGMM 118 Query: 119 CSEKELMLSDDSASIME----LPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS KEL L+++ E L +D P +G + L L + ++D +TPNR DC+ + Sbjct: 119 CSGKELGLTEEDYPGAETHGILILDKPYELGADIKKVLGLEETVVDFEITPNRPDCLSIM 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GI + A ++ E + ++ LC +A + V+ +P Sbjct: 179 GIGREAAATFKKPFNALDPIVKEGPEMVEAAASITVECPQLCPRYATRIITNVKIGPSPK 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALD 291 WMR RLKA G+R I+ +VDITNYV L+ G P H FD + + + VR A GE LD Sbjct: 239 WMRDRLKAAGIRPINNVVDITNYVMLECGQPMHAFDLNSLKQRRIVVRTAHDGELFETLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L D +VI ++AG++GG ++ D+T VL+E A ++ +++ + + LG Sbjct: 299 GVQRRLDGDMLVITDGMNPVAVAGVMGGANSEISDDTHTVLLESANFNKVSVRNTSRKLG 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE- 410 + T++ RFE+G+D + + L L L GT I ++++ + E Sbjct: 359 LRTEASSRFEKGLDPELVALALDRAAELFNMLGAGTPMQGVIDVYSIKPEQRVIQTDVES 418 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + ++ +L L F V + V VPS+RQDV E ADL EE+ R YG D Sbjct: 419 INALLGTTISADEMRAMLLPLAFEVECHDSRMSVKVPSFRQDVVEMADLAEEVARFYGYD 478 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS----KEQSVLFGG 526 +IK + +RN ++Q Y+K VL + + EV +SF K+ + Sbjct: 479 RIKPTLMKSGISVGRRN--IRQQLMEYIKDVLTACGLYEVNTYSFTGYRQLKQAGIKMDE 536 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE--- 582 + + I N + D S MR +L+P +L+ RN++R + F +FE + V+ N+ P Sbjct: 537 SFKPVTIKNALGEDQSLMRPTLIPSMLEVLARNINRGVDSFGVFEAAPVFLANELPPITL 596 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ M + G+ G+ VD F K +V+E ++ + F Sbjct: 597 PQQPMRLAV-----GLYGN--------------VDFFTLKGIIEAVLEAL-AIKGIYFSP 636 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +HPGR+ + +V G GE HP++LD F + I E+ LD + T Sbjct: 637 TQRDGFHPGRTAEVAFDTTVV-GVMGEVHPDVLDSFDVEKRIYIAELDLDML---LDNGT 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 + V L V+RD+A +V +H+ A + N+IK +LI+DV +FDV++G + EG Sbjct: 693 LDRTYVALPKFPAVQRDIAIMVPKHVLARDIENVIKKSGGKLIEDVKLFDVYEGSQIPEG 752 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVA ++ + T D ++ L +RI+ + ++ A LR Sbjct: 753 YKSVAYSIVYRASDRTLTDQEVDKLQERIIRALGEQVGAQLR 794 >gi|302335333|ref|YP_003800540.1| phenylalanyl-tRNA synthetase beta subunit [Olsenella uli DSM 7084] gi|301319173|gb|ADK67660.1| phenylalanyl-tRNA synthetase beta subunit [Olsenella uli DSM 7084] Length = 823 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 257/849 (30%), Positives = 412/849 (48%), Gaps = 71/849 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPD-- 57 M+ + WLK +D ++ D G EVE V+ A + +VL +PD Sbjct: 1 MRVSYEWLKTMVDVPDDPHELVDEFVRTGTEVEAVERLGADIRGVVTSQVLEKVPHPDSD 60 Query: 58 ------LDCAILRIDT-GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 +D +D GK +QVVCGA N G V A G+ +P + + K+R Sbjct: 61 HLFVCKMDVGACNVDADGKPVPLQVVCGAQNFEQGDKTVTALVGARLP-GGIEIKRGKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 GIES GM CS +EL L D + IM LP DAPVG ++Y + D +ID +TPNR DC+ Sbjct: 120 GIESLGMNCSSRELGLDGDHSGIMILPPDAPVGVDFTEYRGMCDTVIDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-----DDSSLCKGFAMCCVKGV 225 + G+A++ AA L + I + + ES DL +D LC + V+GV Sbjct: 180 MCGMAVE-AAAVLDRDTHIELPA-IKGESADFGRTADLVDVHIEDPELCGRYTARVVRGV 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRR 280 + +P W+ +R+ A G R I+ +VD+TNYV G P H FD ++ + VR Sbjct: 238 KIAPSPEWLARRVIACGARPINNVVDVTNYVMFLTGQPLHAFDLGKLGKRAGKRHIVVRA 297 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A GE + LD QE L+PD VI DG+ ++AG++GG + D+ T DVL+E A++D Sbjct: 298 ARKGELLTTLDGQERALTPDMTVITDDGKTPIALAGVMGGLDSDIDEGTVDVLLESAVFD 357 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 +I+R+ +NL +++++ R+ER VD ++ + + + C A+ +C Y Sbjct: 358 AGHISRTSRNLDLMSEASIRYERQVD-GARCAIVSDVAAALFEQC--CAAQVCEGMVDAY 414 Query: 400 -KPRKIVFMNSEVKRLSGI-DVPIEDSLRI--LERLGFSVIGEYD----KFEVSVPSWRQ 451 P M+ R+ + PI D + LERLG SV G + V P+ R Sbjct: 415 PAPVAAPEMDLRPDRVRALCGAPITDEFMVSRLERLGCSV-GHAEACGGALHVVAPTNRP 473 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ + DLVEE+LR++G + EP L+++Q R R + L + + E Sbjct: 474 DLVREIDLVEEVLRLWGEGDV--EPTLPAARNHAGGLTVEQRRLRDIGSALRASGLAETS 531 Query: 512 NWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 ++F L G G ++I+ P+ AD S MR ++PGLL++ N+D + + Sbjct: 532 TYNFADPRDLELLGMDEVGRGVPVKIMRPLVADQSEMRRDMMPGLLRSVAYNIDHGVDNV 591 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKA--- 623 ++E+ V+ Q + S+ + GS WSD S R +D FDAK Sbjct: 592 HLYEIGRVFFGHPHRSQPDEPLFV---SAAMCGS---WSDDSWCAKRLPLDFFDAKGIVE 645 Query: 624 ---DALSVIEPFVSLDSLRFESGAPS---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 DAL ++ +RF++ P+ W PGRS + E+ LG+ G HP L Sbjct: 646 GLLDALRIVR-------VRFKAADPARYGWLQPGRSAEVIAQGEL-LGWVGNIHPTSLKN 697 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 F + P+ FE+ + ++ ++ + V +L V DLA +VD+ + +V I Sbjct: 698 FDIDVPVVAFELSVAALLRLAQRELPYEDV---PTLPGVSIDLALVVDEAMTFEQVVQRI 754 Query: 738 KNV-DRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 ++ +L+ DV +FDV++ +G GKKS+A + + T +++ R+V V+ Sbjct: 755 RSAGGKLLSDVRLFDVYRDAVRVGVGKKSMAFSLTYRAADHTLTSEEVDRAHGRLVTKVM 814 Query: 796 KKTNAVLRS 804 + T +R Sbjct: 815 RSTGGEVRG 823 >gi|168181823|ref|ZP_02616487.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum Bf] gi|237796586|ref|YP_002864138.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum Ba4 str. 657] gi|182675215|gb|EDT87176.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum Bf] gi|229263295|gb|ACQ54328.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum Ba4 str. 657] Length = 793 Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 246/834 (29%), Positives = 422/834 (50%), Gaps = 73/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPVKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILEQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SESI +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSESIKDSLKVEVKDT-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK + LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEGEKFITLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTNISKEEMQECLDRLDLNTEIKGEILEIHVPTFRSDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFIS-------- 517 I P+T + +++++Q + V L + + + +++SF+S Sbjct: 477 I-----PITTI---KSVTMQAGKNEKQHLDDKVIETLMASGLNQSISYSFVSPKVFEKIN 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 KE S L ++ ++I NP+ D S MRT+ +P +++A RN R ++FE+ +Y Sbjct: 529 LKEDSNL----RKVVKIKNPLGEDFSIMRTTTIPSMMEALSRNYSRNNDYASLFEIGKIY 584 Query: 577 ---ENDT--PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 E+ T PE + + G+ VD F+ K +++ Sbjct: 585 IPKEDSTELPEEKNIVTIGLYGA---------------------VDYFNLKGIVENILGG 623 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L+ + P+ +HPGR+ + + V G GE HP++ D + + E+ Sbjct: 624 LGIDNYKLKRQEENPT-FHPGRTAELYIKKDYV-GILGEIHPDVQDNYDIEERCYVAELN 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + K K+ L V RD+A IVD + + NIIKN +++ + + Sbjct: 682 LD---VLYKHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHL 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 739 FDVYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|303239610|ref|ZP_07326135.1| phenylalanyl-tRNA synthetase, beta subunit [Acetivibrio cellulolyticus CD2] gi|302592781|gb|EFL62504.1| phenylalanyl-tRNA synthetase, beta subunit [Acetivibrio cellulolyticus CD2] Length = 795 Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 251/839 (29%), Positives = 409/839 (48%), Gaps = 81/839 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK L WLKD++D +V+ ++ D +T G +VE ++ + E +S + K++ +E++PD D Sbjct: 1 MKAPLKWLKDYVDINVTPKEFADAMTLSGSKVEGIEVQGEEISKIVVGKIIEIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + IQVV GA N+++ A G+ +P + I + K+RGIES GMM Sbjct: 61 KLQVTKVDIG-SEVIQVVTGAQNIKLNDYIPVALVGATLPGDKKI-SKGKLRGIESNGMM 118 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL LS + I L +G + + + +++ ID +T NR DC+ + Sbjct: 119 CSIEELNLSREDYPDAPEHGIYILEPGLELGSDVKEVMGINETTIDFEITSNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + + K+ + + + ++ D LC +A VK V+ +P Sbjct: 179 GLAREAAVTLKKEFKKPQVKVLEKGDEAKNYVSVEIKDPDLCPRYAARVVKDVKIGPSPK 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALD 291 WM++RL+A G+R I+ +VDITNYV L+ G P H FD + + + VRRA GE + LD Sbjct: 239 WMKERLRAAGVRPINNIVDITNYVMLEYGQPMHAFDLKDVQGNKIIVRRAFDGETLKTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +Q+ +L +VIA + R ++AG++GG ++ DN +L E A ++ + + K LG Sbjct: 299 DQDRNLDSSMLVIADESRAIAVAGVMGGANSEISDNAKAILFESANFEGTAVRLAAKKLG 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIAR----NITYKPRK 403 + T++ RFE+G+D++ +IP + V L+ L GT D + + IT +P K Sbjct: 359 LRTEASGRFEKGLDVENVIPAVDRAVQLVEELGAGTVCKGIVDCYVKKTEQVTITLRPDK 418 Query: 404 I-VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 I F+ G ++ E+ + IL+ L F V G V VPS+R DVE +AD+ EE Sbjct: 419 INAFL--------GTNISKEEMVSILKALEFEVDGSGI---VKVPSFRPDVEREADIAEE 467 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS----- 517 I R YG + I++ L + + +QS +K + S + E +SF S Sbjct: 468 IARFYGYNNIEATLLSGKAATLGKK-TYKQSIEDLIKDTMISCGLYEAFTYSFTSPKDFD 526 Query: 518 ----KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 E S L + + I NP+ D S MRT+ +P +L N +R I + +FE+S Sbjct: 527 MINLPEDSAL----RNAVVISNPLGEDFSIMRTTTIPDMLTVISTNYNRRIEEARLFEMS 582 Query: 574 HVYENDTPEGQKYMAAGIRKG--SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 VY PE K + G+ G D +D K +E Sbjct: 583 FVY---LPESLPIKELPKEKPILTLGMYGE--------------TDFYDLKG----TVEE 621 Query: 632 FVSLDSLRFESGAP----SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +S ++ AP S +HPGR+ + E G GE HP + + F C Sbjct: 622 LLSRLGIKEYEFAPVKDNSSFHPGRTASLMIKGEYA-GIIGEVHPQVSEKFE-----CPE 675 Query: 688 EVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLI 744 YL I + K + L V RD+A +V I + +IIK +++ Sbjct: 676 RTYLGVIEVESLVKNSALESQYKPLPKFPAVSRDIAMLVKDEIMVKQIEDIIKQRSGKIL 735 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +D+ +FDV++GK + EG KSVA + + T D+++ M +I+E + A LR Sbjct: 736 EDIKLFDVYKGKQVPEGMKSVAYSITFRASDRTLTDEEVGKTMTKILEGLRTNLEAQLR 794 >gi|329736255|gb|EGG72527.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus epidermidis VCU028] Length = 800 Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 238/821 (28%), Positives = 418/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +PD D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKKLVVGHVLSKTPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + + L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKNYESGIYVFPEAVKPGTDALEAIYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVAALYQTKMNKPQLTSNESQESAKDELTIEVKNEDKVPYYSTRVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVTEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYASGTVLKDRVSHGDLGSFVTPIEITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G ++ E+ + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNRTIGFNLTDEEIIDIFEQLGFDTENKNGEITVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + L+ +Q +TR VK L + + + +S +SK + F R Sbjct: 480 EIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLDQAITYSLVSKNHATDFALQNRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + K V+E +L+F+ +G Sbjct: 599 YL-SGILTG----DFVNNTWQSKKES----VDFYLTKG----VVERIAEKLNLQFDFRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 646 QIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + V RD+A V+ + + L++II +N + +++D VFDV++G+ L +GK Sbjct: 704 YEPIPRFPG---VTRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 761 KSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|303248731|ref|ZP_07334984.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] gi|302489896|gb|EFL49824.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio fructosovorans JJ] Length = 801 Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 238/802 (29%), Positives = 404/802 (50%), Gaps = 40/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WL++ + + +++ D LT +GLE+E++ N E ++ + KVL+ E +PD D Sbjct: 1 MLLSLAWLREFTPYEGTPQQLADRLTMLGLEIEEIKNPFEEIASVVVGKVLTCEAHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + +VCGAPNV G A G +P + + KIRG S GM+ Sbjct: 61 HLSCCTVDVGGEAPLPIVCGAPNVAAGQHVPVATVGVTLP-GGLHIKKSKIRGQVSEGMI 119 Query: 119 CSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSE EL L+++ S IM LP A VG L D L L ++DVS+TPNR+DC+ V GIA + Sbjct: 120 CSESELGLAEERSGGIMVLPESATVGWSLPDALGLDTCVLDVSITPNRADCLSVLGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A L +S P S ++ +++D+ C + + GV +P +R R Sbjct: 180 VAMAFDLPLTLPEVSYPESGPDAATQVAIEIEDAEQCPVYRAKLLTGVAVGPSPERIRWR 239 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L A+G R IS +VD TNYV + G P H FD ++++ + + VR A GEK+ LD QE Sbjct: 240 LLAIGQRPISNIVDATNYVLFELGQPLHAFDRAKLAGNTVKVRNAAEGEKLTTLDGQERL 299 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +++I + ++AG++GG+++ ++T+VL+E A++ P I ++ + L + +++ Sbjct: 300 LTARDLLICDAEKPVALAGVMGGENSEMGSDSTEVLLECAVFRPGAIRKTARRLSLPSEA 359 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLS 415 YRFERGVD G + + VSL+L GGT +A Y PR I F + L Sbjct: 360 SYRFERGVDQVGSVYAMHRAVSLMLETAGGTVLPGEAVAEPHPYTPRGIGFRPARASLLL 419 Query: 416 GIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++P + + L LG + V+ PS+R D+E +ADL+EE+ R+YG+D+I Sbjct: 420 GEEMPEDFCRKTLTALGCKLTDTDPSGTMAVTPPSYRLDLEREADLIEEVGRVYGLDRIA 479 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR---AMMEVVNWSFISK-EQSVLFGGGQR 529 + L +V + + ++ + R+ A + E VN+SF+ + +L Sbjct: 480 PK---LPRVSKSLDDAAPETEFGFWARLRAYAVGFGLREAVNYSFVGHGDLDLLCLDAAC 536 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP+S D + MR L PGLL A N+ + A +FEV+ ++ D A Sbjct: 537 RVSVANPLSEDQNVMRPMLAPGLLGAVRHNLAQGNAHLRLFEVARIFTADVASDSTAREA 596 Query: 590 GIRKGSSGIEGS--GRLWSDKSEERCRFVD---LFDAKADALSVIEPFVSLDSLRFESGA 644 G R G + + G+ W + + D L + + EP S R E Sbjct: 597 G-RMGIA-LHGARHPEAWPWPKDVEAGYADIKGLVEGLLAHFHLPEPTFS----RVEDQ- 649 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 W P + T + LG G+ P + D F +P+ E+ +D++ + Sbjct: 650 -PWLAP---QVDVTCGPVRLGLIGQVTPEVADAFHARSPLWIAELDIDAL----RVLVDA 701 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEG 761 +K V L PV+RD+ V + G ++ I+ + ++V + D ++ + GE Sbjct: 702 QKTVFAPLPGFPPVRRDITLAVPAGVTVGAVLAAIRTAKAPIFENVVLIDAYEPE--GEA 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDI 783 ++ + ++ + L+ T +D ++ Sbjct: 760 ERRLTFRITYRHLEKTLKDKEV 781 >gi|302866853|ref|YP_003835490.1| phenylalanyl-tRNA synthetase subunit beta [Micromonospora aurantiaca ATCC 27029] gi|302569712|gb|ADL45914.1| phenylalanyl-tRNA synthetase, beta subunit [Micromonospora aurantiaca ATCC 27029] Length = 864 Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 272/871 (31%), Positives = 418/871 (47%), Gaps = 126/871 (14%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKV-DNREALS-PFTIVKVLSVE--- 53 M+ ++SWL++++D D+ + L +G+EVE V D RE+++ P + +VL +E Sbjct: 1 MRVSVSWLREYVDLPADLPTGDLEQALVDLGIEVESVVDLRESVTGPLVVGEVLEIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N VG V PG +P + Sbjct: 61 GFKKPIRFC---RVDVGAANGTGEPQEI--VCGARNFAVGDKVVVILPGGVLP-GGFAIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPID--APVGGRLSDYLELSDPIIDVSLTP 163 RK G S GM+CS +EL L DD + I+ LP D A G + L D ++++ +TP Sbjct: 115 ARKTYGRNSHGMICSAQELGLGDDHSGIVVLPEDVKAQPGDDARPVVGLDDVVVEMEITP 174 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 +R + VRGIA +L A LG P + ++ D C FA V+ Sbjct: 175 DRGYALSVRGIARELSHA-LGVPFRDPADAPAPGATAEPAYPVEVRDPVGCDRFAARMVR 233 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 GV V P WMRQRL G+RSIS VDITNY+ L+ G P H FDA RI+ L VRRA Sbjct: 234 GVDPTVETPGWMRQRLTVAGVRSISLAVDITNYLMLELGQPMHAFDADRIAGTLVVRRAE 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAG-----------IIGGKHAGCDDNTTDV 331 +GEK+ LD LS +++VI G ++AG ++GG+ + +TT+V Sbjct: 294 AGEKLTTLDGVNRTLSAEDLVICDAGLPNALAGEDAGVPISLAAVMGGETSEVLASTTNV 353 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 L E A WDP + R+ + + +++ R+ERGVD + L+ V L+ L GGTA + Sbjct: 354 LFEAAHWDPATVGRTARRHKLFSEAAKRWERGVDPALPLVALEKAVRLLTDLAGGTAGEE 413 Query: 392 CIARNITY-KPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFE------ 443 + +I + PR V + ++ R G+ + + +LE++G +V D+ Sbjct: 414 VL--DIDHVAPRTPVTLPVDLPSRRVGVTYSPDRVVELLEQVGCTVTRGTDRLAEDPGAV 471 Query: 444 ----------------VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRN 487 V+ PSWR D+ + ADLVEE++R+ G D++ S L R Sbjct: 472 GTAGVGPGAGAGEVLTVTPPSWRPDLTDPADLVEEVVRLDGYDRVPSV---LPTAPPGRG 528 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQRE--LEILNPISADMS 542 L+ QQ R R V R LA R +EV+ F++ E Q L R + + NP+S + Sbjct: 529 LTWQQQRRRAVARSLAERGYVEVLAQPFVAPELVDQLGLPADDPRRPAVRLANPLSEEEP 588 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-------------NDTPEGQKYMAA 589 +RT+LL LL RNV R D AI+E+ V+ + P +++ AA Sbjct: 589 LLRTTLLGPLLGIVKRNVGRGQRDVAIYEIGTVFHPRPGAGTPPAMGVDRRPTDEEFAAA 648 Query: 590 GIRKGS---------------SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPF 632 + +G G+GR W+D E +D AD ++V Sbjct: 649 DAVVPAQPRHVAVALTGEIEPAGWWGAGRTAGWADAVEAGRAVLDAAGIPADRVTV---- 704 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 +G + +HPGR + ++V+G+ GE HP +L L E+ LD Sbjct: 705 --------RAGERAPWHPGRCAELVVD-DVVVGHAGELHPAVLAALELPRRTSAMELDLD 755 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFD 751 ++P + T +S+ P D+A +VD +PA + +++ L++DV +FD Sbjct: 756 ALPAAPLAAGPT-----ISTFPPALIDVALVVDDSVPAAEVRAALVEGAGALLEDVRLFD 810 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 V+ + LGEG+KS+A ++ TFR D Sbjct: 811 VYTSEQLGEGRKSLAYKL-------TFRAPD 834 >gi|308272684|emb|CBX29288.1| Phenylalanyl-tRNA synthetase beta chain [uncultured Desulfobacterium sp.] Length = 803 Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 244/813 (30%), Positives = 424/813 (52%), Gaps = 41/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK +LSWL+D++ + ++ + LT GLEVE V D L + +++ + +P+ D Sbjct: 1 MKVSLSWLEDYIPIETDIDDLASALTMAGLEVESVTDTFNYLEKVVVGRIIEINPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R+D G +Q+VCGAPN++ LL A G+ + + +I ++RG S GM+ Sbjct: 61 KLKICRVDAGDGV-LQIVCGAPNIKENLLVPLAMHGTLLSDGTLI-EACEVRGQRSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL + DD + ++ L G ++ L+LSD +++ LTPNRSDC+ + GIA ++ Sbjct: 119 CSEKELEIGDDGSGVLVLSEKCRAGSSITSALDLSDYTLEIGLTPNRSDCLSIIGIAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K+K +++ ++++ + ++ C +A VKG+ +P W+R+RL Sbjct: 179 AAIQKTKIKYPSVNQINNNKNYDF-VSVKIEAVDHCPRYAAGLVKGISVAPSPFWLRKRL 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL 297 +VG R I+ +VDI+N+V L+ G P H FD ++++ + VR A GE + LD + + Sbjct: 238 LSVGQRPINNIVDISNFVMLECGQPLHTFDFDQVAEKKIVVRTATKGEIFVTLDGKNRVM 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + ++I + +IAG++GG ++ ++T DVL+E A ++P++I ++ K LG+ T+S Sbjct: 298 DEEMLLICDGEKPVAIAGVMGGLNSEISNSTKDVLIESAYFNPLSIRKTSKKLGLSTESS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD G + L LI + G I + K I S+ +L G Sbjct: 358 YRFERGVDPDGTVRALIRAADLIAEIGNGKMVESIKDEYLLKQKTDAIELSVSKTNKLLG 417 Query: 417 IDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 +++ + +LE + F V D E+ PS+R D+ DL+EE R+YG + I + Sbjct: 418 VELNKDTIKALLESIEFKVQNSSSDTIEIVPPSFRVDITRPVDLMEEAARLYGYNNIPT- 476 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----SVLFGGGQRE- 530 LPL E L R ++ ++ + E +N+SF+++ + +R Sbjct: 477 TLPLMHAETVHPLETLVLREN-IRNIMTGLSFAEAINYSFVNESTCDRLKLSSDSPKRHL 535 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 L +LNP++ + + MRTSL+PGL++ RN+ + + I+E+ ++ +N PE + Sbjct: 536 LYVLNPLTEEQNVMRTSLIPGLIETMRRNLSHQVRNLKIYEIGKIFLNKDKNSLPE-EIE 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL---FDAKADALSVIEPFVSLDSLRFESG 643 M AG+ G + W K E C F D+ +A DAL++ + L FE Sbjct: 595 MIAGLWTG----DRYNPAWYTK-ETNCDFYDIKGVAEAILDALNIDNAVFT--KLSFELC 647 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + Y G + I E + G GE +L F L FE+ +S+ K Sbjct: 648 NYTRY--GYTAKIVAGKETI-GLVGELDSGVLQNFDLKQAAFIFELDCNSL---LKLSNL 701 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 +K L RD+ I+D+ I A ++++ IK + ++LI++ +FD+F+G + K Sbjct: 702 SKMSEQLPKYPSAIRDITIIIDKDIEAMSIIDNIKGIGEKLIENANLFDIFEGAPIPSAK 761 Query: 763 KSVAIQVLIQPLKDTFRDDDI----RILMDRIV 791 KSV+I++ + + T DD++ +I+ DR++ Sbjct: 762 KSVSIRITYRSSEKTLEDDEVNNTHKIITDRLI 794 >gi|296331589|ref|ZP_06874058.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675452|ref|YP_003867124.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] gi|296151184|gb|EFG92064.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413696|gb|ADM38815.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus subtilis subsp. spizizenii str. W23] Length = 804 Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 237/824 (28%), Positives = 414/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDIKGMEPAVLAEKITRAGIEVEGIEYKGEGIKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DIGADAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P A G L+L D I+++ LTPNR+D Sbjct: 117 NGMICSLQELGIESKLVAKEYAEGIFVFPNAAETGSDALAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A ++K P +SE I ++D + +K V Sbjct: 177 MNMLGVAYEVAAILDTEVKLPQTDYPAASEQASDYIAVKVEDQEANPLYTAKIIKNVTIA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A E I Sbjct: 237 PSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAENETI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+QE LS D++VI + + Q++AG++GG + ++T +L+E A ++ + ++ Sbjct: 297 VTLDDQERKLSADHLVITNGTKAQAVAGVMGGAESEVQEDTKTILLEAAYFNGQTVRKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVF 406 K+LG+ ++S RFE+G+D + + LI GG I ++T + I Sbjct: 357 KDLGLRSESSVRFEKGIDPARVRLAAERAAQLIHLYAGGEVLTGTIEEDHLTIEANNIHV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V + G+ + E+ + I +RLGF+V + V+VPS R D+ + DL+EE R+ Sbjct: 417 SADKVSSVLGMTISKEELISIYKRLGFTVGEANELLVVTVPSRRGDITIEEDLIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D I S LP T L+ Q++ R V+R L + + + +S +++++ F Sbjct: 477 YGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQAITYSLTNEKKAAAFAI 534 Query: 527 GQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 + +L P+S + S +R SL+P LL++ N+ R A++EV V+ E DT Sbjct: 535 EKSLNTVLALPMSEERSILRHSLVPNLLESVSYNLARQTDSVALYEVGSVFLTKEEDTKP 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + AG G +LW + + VD F AK +++ LDS+ F Sbjct: 595 VETERVAGAVTGL----WRKQLWQGEK----KPVDFFVAKGIVEGLLDKLNVLDSIEFVQ 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 HPGR+ I + ++ G+ G+ HP++ + E Y+ + + Sbjct: 647 SERKQLHPGRTANILLNGSLI-GFIGQVHPSLEKELDIK------ETYVFELDLHALLAA 699 Query: 703 KTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 T +V+ + +P V RD+A + ++ + +G L ++IK +L+ +V+VFDV++G+ + Sbjct: 700 DTAPLVYTAIPKYPSVTRDIALVTNKSVTSGQLESVIKEAGGKLLKEVSVFDVYEGEHME 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 EGKKSVA + + T ++++ ++++ + AVLR Sbjct: 760 EGKKSVAFSLQYVNPEQTLTEEEVTKAHSKVLKALEDTYQAVLR 803 >gi|257884717|ref|ZP_05664370.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,501] gi|257820555|gb|EEV47703.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,231,501] Length = 806 Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 232/827 (28%), Positives = 427/827 (51%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE V E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGVTVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEIFVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + K + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 355 TAKQFNLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ Sbjct: 415 KISLERINQYLGTSLVVKEVNEIFEALGFSYEEKDHVYSVVVPPRRWDIQIEADIIEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F Sbjct: 475 RIYGYDQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTP 581 + + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END Sbjct: 533 VIKESNITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP- 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + ++ ++ + I G +W +K + + + VD F K ++ E + + + Sbjct: 592 --RTHLPQEVKHAAIAISG---IWEEKDWQTKAQNVDFFTIKGLLENLFEQLGITEDIHY 646 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 647 QTVTEMKEMHPGRTAAIYL-GEKFIGFVGQVHPTIAKIYDIP------ETYVAEFDLSAV 699 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGK 756 K +V ++ V RD+A +V + + L +I++ R + D+ +FDV+QG+ Sbjct: 700 VEAAQKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIHLFDVYQGE 759 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ +G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 760 NIEKGHKSMAYSLTFVNPEATLTDEEINKGMEKVEKALVENLEASIR 806 >gi|315658553|ref|ZP_07911425.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis M23590] gi|315496882|gb|EFU85205.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus lugdunensis M23590] Length = 800 Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 246/821 (29%), Positives = 417/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V++E + + +T G+EV+ + D + + + + S E++ D D Sbjct: 1 MLISNEWLKDYVDAGVAIEDLAERITRTGIEVDDIIDYTKDIKNLVVGYIQSKEKHSDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDIGEKEAVQIVCGAPNVEAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +E+ +S ++ + PI+ + YL +D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNVVPKAYENGIFVFTEPIEPGTDALTALYL--NDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + SES E+ +D+ ++ VK V + Sbjct: 178 MIGTAYEVAALYKTKMTKPHTQSDEISESTSNELSVSIDNPEKVPYYSARIVKNVTIAPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A E + Sbjct: 238 PIWMQMRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIIVRQANENETMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LDN E L ++VI++ ++AG++GG + TT+V+VE A++DP++I + + Sbjct: 298 LDNTERTLVNSDIVISNSKEPIALAGVMGGDFSEVTATTTNVVVEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMN 408 L + +++ RFE+G+ + + + L+ + G + A N+ I Sbjct: 358 LNLRSEASSRFEKGIATEFVDEAVDRACYLLQTYADGNVLQGRVSAGNLGSFVTPIKITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V + G ++ + I E+LGF D+ V+VPS R+D+ K DL+EE+ RIYG Sbjct: 418 EKVNKTVGFNLSCGEIKAIFEQLGFKTQQNGDELTVNVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S +P+ + L+ +Q +TR VK L + + + +S +SK+ + F Sbjct: 478 YDNIPS-TMPVFEDVTSGELTDRQHKTRIVKETLEGAGLDQAITYSLVSKDHAKDFALQT 536 Query: 529 R-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R + +L P+S S +R SLLP L++A NV R D ++E+ V+ E + PE Sbjct: 537 RPTISLLMPMSEAHSTLRQSLLPHLIEAAAYNVARKNKDVKLYEIGRVFFGNDEGELPEE 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W +K E VD + AK V E +L+ +++G Sbjct: 597 VEYL-SGILTGEYVV----NTWQNKKEA----VDFYIAKGVVDRVAEKL-NLE-FSYKAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 S HPGR+ II + + G+ GE HP + L N FE+ +I Sbjct: 646 EISGLHPGRTAIISLQGKDI-GFIGELHPQLAAENDL-NRTYVFELNYHTIMEVAVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 K + V RD+A V +PA L+ I N D ++ D VFDV++G+ LGEGK Sbjct: 704 YKPIPKFPG---VTRDIALEVTSDVPASVLLETIHSNGDDILQDSLVFDVYEGEHLGEGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + D+I+ ++ AV+R Sbjct: 761 KSIAIRLNYLDTENTLTDERVTKVHDKILA-ALQAQGAVIR 800 >gi|160286086|pdb|2RHQ|B Chain B, Phers From Staphylococcus Haemolyticus- Rational Protein Engineering And Inhibitor Studies Length = 795 Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 232/807 (28%), Positives = 408/807 (50%), Gaps = 36/807 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V +E + + +T G+EV+ +D + + + + S E+ Sbjct: 1 MLISNEWLKDYVDAGVKVEDLAERITRTGIEVDNMIDYSKDIKNLVVGYIQSKEKGSGNI 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 C ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+C Sbjct: 61 C---QVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMIC 116 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +E+ +S + I P + G L L+D +++ LTPNR+D + + G Sbjct: 117 SLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTALYLNDQVMEFDLTPNRADALSMVG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A ++ A ++ + +SES E+ +D+ ++ VK V +P W Sbjct: 177 TAYEVAALYQTEMTKPETQSNETSESATNELSVTIDNPEKVPYYSARVVKNVSIEPSPIW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 ++ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A E + LDN Sbjct: 237 VQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAKDEETMTTLDN 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L ++VI++ ++AG++GG + + TT+V++E A++DP++I + + L + Sbjct: 297 NERKLVDTDIVISNGQEPIALAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLNL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEV 411 +++ RFE+G+ + + + L+ L G D + ++ I +V Sbjct: 357 RSEASSRFEKGIATEFVDEAVDRACYLLQELASGEVLQDRVSSGDLGSFVTPIDITAEKV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ ++ I +LGF + + V+VPS R+D+ K DL+EE+ RIYG D+ Sbjct: 417 NKTIGFNLSNDEIQSIFRQLGFETTLKGETLTVNVPSRRKDITIKEDLIEEVARIYGYDE 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR-E 530 I S LP+ L+ +Q +TR +K L + + + +S +SK+ + F +R Sbjct: 477 IPS-SLPVFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPT 535 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKY 586 + +L P+S + +R SLLP L++AT NV R D ++E+ V+ E + P+ +Y Sbjct: 536 ISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVEY 595 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + +GI G + W K EE +D F AK V E +L+ +++G Sbjct: 596 L-SGILTGEYVVNA----WQGKKEE----IDFFIAKGVVDRVAEKL-NLE-FSYKAGKIE 644 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPGR+ I+ + + G+ GE HP + L FE+ D++ ++ Sbjct: 645 GLHPGRTAIVSLEGQDI-GFIGELHPQVAADNDLKRTYV-FELNYDAMMQVAVGYINYEQ 702 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSV 765 + V RD+A V+ +P+ L II N + ++ VFDV++G+ L +GKKSV Sbjct: 703 IPKFPG---VTRDIALEVNHDVPSSELKQIIHNNGEDILQSTLVFDVYEGEHLEKGKKSV 759 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVE 792 AI++ +DT D+ + + D+I+E Sbjct: 760 AIRLNYLDTEDTLTDERVSKIHDKILE 786 >gi|289551056|ref|YP_003471960.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus lugdunensis HKU09-01] gi|289180588|gb|ADC87833.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus lugdunensis HKU09-01] Length = 800 Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 247/827 (29%), Positives = 420/827 (50%), Gaps = 51/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V++E + + +T G+EV+ + D + + + + S E++P+ D Sbjct: 1 MLISNEWLKDYVDAGVAIEDLAERITRTGIEVDDIIDYTKDIKNLVVGYIQSKEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P ++ + K+RG S GM+ Sbjct: 61 KLNICQVDIGEEEAVQIVCGAPNVEAGQHVIVAKVGGRLP-GDIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +E+ +S ++ + PI+ + YL +D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNVVPKAYENGIFVFTEPIEPGTDALTALYL--NDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + SES E+ +D+ ++ VK V + Sbjct: 178 MIGTAYEVAALYKTKMTKPHTQSDEISESTSNELSVSIDNPEKVPYYSARIVKNVTIAPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A E + Sbjct: 238 PIWMQMRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIIVRQANENETMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LDN E L ++VI++ ++AG++GG + TT+V+VE A++DP++I + + Sbjct: 298 LDNTERTLVNSDIVISNSKEPIALAGVMGGDFSEVTATTTNVVVEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMN 408 L + +++ RFE+G+ + + + L+ + G + A N+ I Sbjct: 358 LNLRSEASSRFEKGIATEFVDEAVDRACYLLQTYADGNVLQGRVSAGNLGSFVTPIKITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V + G ++ + I E+LGF D+ V+VPS R+D+ K DL+EE+ RIYG Sbjct: 418 EKVNKTVGFNLSCGEIKAIFEQLGFKTQQNGDELTVNVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S +P+ + L+ +Q +TR VK L + + + +S +SK+ + F Sbjct: 478 YDNIPS-TMPVFEDVTNGELTDRQHKTRIVKETLEGAGLDQAITYSLVSKDHAKDFALQT 536 Query: 529 R-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R + +L P+S S +R SLLP L++A NV R D ++E+ V+ E PE Sbjct: 537 RPTISLLMPMSEAHSTLRQSLLPHLIEAAAYNVARKNKDVKLYEIGRVFFGNDEGKLPEE 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W +K E VD + AK V E +L+ +++G Sbjct: 597 VEYL-SGILTGEYVV----NTWQNKKEA----VDFYIAKGVVDRVAEKL-NLE-FSYKAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 S HPGR+ II + + G+ GE HP + L N FE+ +I Sbjct: 646 EISGLHPGRTAIISLQGKDI-GFIGELHPQLAAENDL-NRTYVFELNYHTI--------- 694 Query: 704 TKKVVHLSSLHP------VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + V + P V RD+A V +PA L+ I N D ++ D VFDV++G+ Sbjct: 695 MEVAVGYINYQPIPKFPGVTRDIALEVTSDVPASVLLETIHSNGDDILQDSLVFDVYEGE 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGEGKKS+AI++ ++T D+ + + D+I+ ++ AV+R Sbjct: 755 HLGEGKKSIAIRLNYLDTENTLTDERVTKVHDKILA-ALQAQGAVIR 800 >gi|126698279|ref|YP_001087176.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile 630] gi|115249716|emb|CAJ67533.1| Phenylalanyl-tRNA synthetase subunit beta (Phenylalanine--tRNA ligase beta chain) (PheRS) [Clostridium difficile] Length = 797 Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 244/831 (29%), Positives = 407/831 (48%), Gaps = 60/831 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL+D++D D+ +++ D +T G +VE +D E + + K+L ++++P+ D Sbjct: 1 MLVSLKWLRDYVDIDIDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA N+ G A GS +P + + RG S GMM Sbjct: 61 KLVVTKVDIG-DKVVQIVTGATNISEGDYIPVAVNGSKLP-GGVEIKQTDFRGELSDGMM 118 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + + I++ +G + D L L D +ID LT NR DC Sbjct: 119 CSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKC 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + GIA + A K+K I S E I + K ++D+ LC+ + V V+ + Sbjct: 179 MMGIAREAAATIGTKVKYPEIEVKESDEEI--DFKVEIDNPDLCRRYVARMVTDVKIEPS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++RL G+R IS +VDITN+V L+ G P H FD +++ + + VR A GEK++ Sbjct: 237 PYWMQRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L D +VI + + +AG++GG ++ NT VL E A + P NI + K Sbjct: 297 LDDVERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENIRMTAKK 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 +GI +++ R E+ +D L+ L G + +P+K+V Sbjct: 357 VGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNP 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G+DVP+E + ILE L F + DK E+ VPS+R D+E++AD+ EEI RIY Sbjct: 417 QRINHLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQ---- 520 G + I P Q+E ++ S+ ++ +K + + E++ +SF+S + Sbjct: 477 GFENI-----PSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKI 531 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 V G +R ++LNP+ + S MRT+L+P +L NV I + + FE H++ Sbjct: 532 RVPEGNAKRNFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIPQ 591 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 +++ P+ + M G+ + VD F K + I V Sbjct: 592 DSELPKEENRMCVGM--------------------YGKDVDFFTLKG-TIETILVNVGFK 630 Query: 637 SLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 E + +HPGR I + + V G GE HP++++ + L + E+ +D + Sbjct: 631 CYEIEPQDNNTTFHPGRCAKIVYNNKYV-GTLGELHPDVIENYNLGQRVYVAEIDIDFV- 688 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ 754 +TK V L RD+A IV + + +IIK N L++ +FDV++ Sbjct: 689 --FDNSDRTKNYVPLPKYPSTSRDIALIVKDDVFVKQIEDIIKENGQGLVESYKLFDVYK 746 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 G + G KS+A + + T D+D+ + D+I+ + +K NA LRS+ Sbjct: 747 GSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN 797 >gi|329955165|ref|ZP_08296122.1| phenylalanine--tRNA ligase, beta subunit [Bacteroides clarus YIT 12056] gi|328526164|gb|EGF53183.1| phenylalanine--tRNA ligase, beta subunit [Bacteroides clarus YIT 12056] Length = 820 Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 247/836 (29%), Positives = 413/836 (49%), Gaps = 49/836 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREAL----SPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE V+ + + I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGQEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAA----GL-GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A GL LK+ ++ + E+ L+IK +++ C +A VKGV Sbjct: 181 GVARDLYAYLVQNGLPASLKKPSVDA-FAVENHDLDIKVTVENGEACPRYAGVTVKGVTV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 240 KESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTMPEGTL 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E LS +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 300 FVTLDGVERKLSERDLMICNREEAMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPR 402 + G+ TD+ +RFERG+D + LK ++ L GGT S D+C A + Sbjct: 360 ARRHGLNTDASFRFERGIDPNATLYCLKLAALMVKELAGGTISSDIKDVCAAPAQDF--- 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 ++ +V L G +P+E I+ L ++GE + + VP +R DV+ D++E Sbjct: 417 RVELSYEKVHSLIGKVIPVETIKSIVTSLEMKIVGETAEGLTLDVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 +ILRIYG + ++ + + K + L E++N S ++ Sbjct: 477 DILRIYGYNNVEIPTALKSSLTTKGEWDKSNRLQNLIAEQLVGCGFNEILNNSLT---RA 533 Query: 522 VLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + + ++NP+SAD++ MR SLL G L++ N +R AD FE + Y Sbjct: 534 AYYDGLESYPVKNLVMLMNPLSADLNAMRQSLLFGGLESISHNANRKNADLRFFEFGNCY 593 Query: 577 ----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 E PE K +A G+ +G+ S+ + +++ KA ++ Sbjct: 594 YFNEEKRNPE--KALAPYSEDYHLGLWVTGKRVSNSWAHQDEDSSVYELKAYVENIFARL 651 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + L + Y S ++T L FG +L F + N EVY Sbjct: 652 GLQMHDLVVGNLTDDIYAAALS--VQTRGGKRLATFGVVTRKLLKAFDIDN-----EVYY 704 Query: 692 DSIPISQ-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 + + K K KV +S VKRDLA ++D+ + + I + +L+ +V Sbjct: 705 ADLNWKELMKAVKNVKVNYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEV 764 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++FDV++GK+L GKKS A+ L+Q T D I +M ++V N+ K A LR Sbjct: 765 SLFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVRNLEDKLGAKLR 820 >gi|324993157|gb|EGC25077.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK405] gi|324995540|gb|EGC27452.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK678] gi|327474060|gb|EGF19473.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK408] gi|327489282|gb|EGF21075.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1058] Length = 801 Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 243/825 (29%), Positives = 430/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMSG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + +S +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFLLVENEKQAADSLSVALETEKASY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +T V++E A++ +I ++ Sbjct: 296 LDGEERELEASDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFGGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFGGG 527 D++ + LP + QQ R R R LA A + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLRRRV--RTLAEGAGLTEIITYALTTPEKAVEFTLN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E T ++ Sbjct: 533 PSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFEQ-TGNPKEE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + + VD F AK V+E + L E A Sbjct: 592 LPNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAAS 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 + HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 645 NQIKSMHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQ 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSL 758 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G L Sbjct: 698 LQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 757 GVGLKSMAYSLTFQNPESSLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|325696818|gb|EGD38706.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK160] Length = 801 Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 243/825 (29%), Positives = 430/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMSG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + +S +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFLLVENEKQAADSLSVALETEKASY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +T V++E A++ +I ++ Sbjct: 296 LDGEERELEASDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFGGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFGGG 527 D++ + LP + QQ R R R LA A + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLRRRV--RTLAEGAGLTEIITYALTTPEKAVEFTLN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E T ++ Sbjct: 533 PSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFEQ-TGNPKEE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + + VD F AK V+E + L E A Sbjct: 592 LPNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAAS 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 + HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 645 NQIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIEEQ 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSL 758 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G L Sbjct: 698 LQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 757 GVGLKSMAYSLTFQNPESSLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|116670051|ref|YP_830984.1| phenylalanyl-tRNA synthetase subunit beta [Arthrobacter sp. FB24] gi|116610160|gb|ABK02884.1| phenylalanyl-tRNA synthetase beta subunit [Arthrobacter sp. FB24] Length = 847 Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 250/863 (28%), Positives = 402/863 (46%), Gaps = 76/863 (8%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDN-REAL-SPFTIVKVLSVERNP 56 M+ LSWL++ + + + E + L +G E E V +AL P + +VLS+ + P Sbjct: 1 MRIPLSWLREFAQVPAEATAEDVMAELVKVGFEEEAVHRPTDALRGPVVVGQVLSLVKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N G V PG+ +P Sbjct: 61 QTNGKTINWCQVRVVPEGQEQTLTGDGIDPSGVQGIICGAHNFVEGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + +D I+ L +D +G + L L D Sbjct: 120 GDFHISARKTYGHLSAGMIASVRELGIGEDHDGILVLSRIGLDPEIGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-----DDS 211 ++++TP+R +RG+A + A + P S P E+ DD+ Sbjct: 180 AEINVTPDRGYAFSIRGVAREYAHA-----TGTAFTDPASQVQAPAELAGGYGVKLNDDA 234 Query: 212 SL-----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 + C F V+G+ P WM RL+ G+RSIS VDI+NYV L+ G P+H Sbjct: 235 PIYGKPGCDRFVARTVRGIDATKPTPPWMVSRLRLAGIRSISLPVDISNYVMLELGQPTH 294 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 +D ++S + VRRA +GEKI LD++E L ++++I D IAG++GG Sbjct: 295 CYDLDKLSGDIVVRRAVAGEKITTLDDKERKLDVEDLLITDDSGAIGIAGVMGGAATEVS 354 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D+T++VLVE A +D ++IARS + + +++ RFERGVD Q + +V L++ L G Sbjct: 355 DSTSNVLVEAAHFDEVSIARSRRRHKLPSEASKRFERGVDWQVAGIAAQRVVDLLVELAG 414 Query: 386 GTA----SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK 441 GTA +D+ A + F + + GID E + LE LG +V Sbjct: 415 GTADEAGTDVGTAPDAVTIELPAAFAAARI----GIDFTDEQIVTSLEDLGAAVARNDAG 470 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 + V+ PSWR D+E K DL EEI R+ G DQI P L R L+ Q + R + + Sbjct: 471 WTVTAPSWRNDLETKEDLSEEIARLVGYDQI---PATLPVAPPGRGLTRVQQQRRRLVQA 527 Query: 502 LASRAMMEVVNWSFISKEQSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 LA + EV+ + F+SK + F G G++ +++ NPIS + +RTS+LPGL++ Sbjct: 528 LADAGLTEVLAYPFVSKAANDTFGVAEQGAGRKAVKLANPISEEQGYLRTSILPGLIEVA 587 Query: 557 GRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 RN R D A+FE V+ DT G++ ++ D+ Sbjct: 588 KRNHSRGFRDLAVFEAGLVFLPGDTLGTPSIPPLGVKPSDEVLDALYDGVPDQPLHIAAV 647 Query: 616 VDLFDAKADALSVIEPFVSLDSLR--------------FESGAPSWYHPGRSGIIKTSAE 661 + D+ A A + D+L G YHPGR+ + + Sbjct: 648 LTGHDSPAAASHTPRAWDWADALDIARLAGDVLGVEIVISQGHHQAYHPGRTAQLSLRSG 707 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 V+GY GE HP +L + E+ D++ + K H+S +D+A Sbjct: 708 EVIGYAGELHPKLLAAHDMPARSVALELNADALFEAAADVIVAK---HISGFPVATQDVA 764 Query: 722 FIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V + +PA L + + L++DV +FDV+ GK + +GKKS+A + + T Sbjct: 765 LVVPKDVPADDVLAALREGAGELLEDVALFDVYAGKGIEDGKKSLAFGLRFRAADRTLTA 824 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 D+ + V ++ AV R Sbjct: 825 DEASAARESAVTVAAERFGAVQR 847 >gi|138896269|ref|YP_001126722.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus thermodenitrificans NG80-2] gi|196250225|ref|ZP_03148919.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. G11MC16] gi|134267782|gb|ABO67977.1| Phenylalanyl-tRNA synthetase beta subunit [Geobacillus thermodenitrificans NG80-2] gi|196210409|gb|EDY05174.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. G11MC16] Length = 804 Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 251/832 (30%), Positives = 426/832 (51%), Gaps = 58/832 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WL +++D T V+ E++ D +T G+EVE+V+ E + I VL E +P+ Sbjct: 1 MLVSYRWLGEYVDLTGVTAEQLADRITKSGIEVERVEALERGMKGVVIGHVLECEPHPNA 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D LR +D G+ + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DK--LRKCLVDLGEGEPVQIICGAPNVAKGQKVAVAKVGARLP-GNFKIKRAKLRGEESN 117 Query: 116 GMMCSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL + + + I P DAPVG ++L L D +++++LTPNR+DC+ Sbjct: 118 GMICSLQELGVETKVVPKEYAEGIFVFPSDAPVGADALEWLGLHDEVLELALTPNRADCL 177 Query: 170 GVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + G+A + VAA LG+ +K + + ES+ I ++ +A VK V+ Sbjct: 178 SMLGVAYE-VAAILGRDVKLPETAVNENEESVHDYISVRVEAPEDNPLYAGRIVKNVQIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I Sbjct: 237 PSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAGEMI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ E L+ D++VI + ++AG++GG ++ D+T V +E A + I ++ Sbjct: 297 VTLDDVERKLTEDHLVITNGREPVALAGVMGGANSEVQDDTKTVFIEAAYFTSPVIRQAV 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVF 406 K+ G+ +++ RFE+G+D L+ +L+ GG S I A +P + Sbjct: 357 KDHGLRSEASTRFEKGIDPARTKEALERAAALMAEYAGGEVVSGIVEANTWKEEPVVVTV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + G + E+ IL L FS + F + VPS R+D+ + D++EE+ R+ Sbjct: 417 ALERINGVLGTAMTKEEVAGILSNLQFSFTEDNGTFTIHVPSRRRDITIEEDIIEEVARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D + + LP+ + + L+ Q++ R V+R + + + +S S +++ F Sbjct: 477 YGYDHLPAT-LPVAEAKPG-ELTPYQAKRRRVRRYFEGAGLFQAITYSLTSPDKATRFAL 534 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A N R + + A++E+ VY EN P Sbjct: 535 ETTEPVRLALPMSEERSVLRQSLVPHLLEAASYNRARQVENVALYEIGSVYLSKGENVQP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL----DS 637 +K AG+ G LW + + D + AK V++ +L D Sbjct: 595 -AEKERLAGVITGL----WHAHLWQGEK----KAADFYVAKG----VLDGLFALLGLSDR 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + + HPGR +AEIVL G+ G+ HP + + L FE+ Sbjct: 642 ISYRPAKRADLHPGR------TAEIVLDGKEIGFVGQLHPAVQKEYDLKETYV-FELAFA 694 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFD 751 + ++ + + + + S V RD+A +VD ++ AG L I + L+ DV +FD Sbjct: 695 ELLNTEGETIRYESIPRFPS---VVRDIALVVDDNVEAGALKQAIAEAGNPLLKDVALFD 751 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++G L GKKS+A + + T D+++ + +R++ V ++ AVLR Sbjct: 752 VYKGDRLPTGKKSLAFSLRYYDPERTLTDEEVTAVHERVLAAVEEQFGAVLR 803 >gi|306819998|ref|ZP_07453648.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551946|gb|EFM39887.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 789 Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 240/826 (29%), Positives = 423/826 (51%), Gaps = 61/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ + W++D++D D+S +++ D +T G + E V+ E +S + K+ + ++PD D Sbjct: 1 MRVPVKWIRDYVDIDISAKELADMMTMSGTKAETVEYPGEEISNVVVGKIEEITKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +I+ GK + +Q+V GA N+ VG + A S +P + + K+RG+ S GM+ Sbjct: 61 KLQVTQINVGKDELVQIVTGASNISVGDVVPVALHKSTLP-GGVKITKGKLRGVASNGML 119 Query: 119 CSEKELMLS----DDSAS--IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS KEL + DD + IM L + +G + + L L D II+ LT NR DC+ + Sbjct: 120 CSCKELNIEEKFVDDKSKNGIMILDSNLTLGQDIKEALCLDDAIIEFELTANRPDCLSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A ++ A +K E+ E+K + D SLC + + VK V+ + Sbjct: 180 GMAREVSATIDKSVKLPENKYEAVKENFDFEVKSE--DESLCPRYMLRKVKDVKIKKSHY 237 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++RL G+R I+ +VDITN+V L+ G P H FDA +++ + +++A GEK LD+ Sbjct: 238 HIQRRLIEAGIRPINNIVDITNFVMLEYGQPMHAFDAKMLNNKIVIKKAVQGEKFTTLDD 297 Query: 293 QEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E L D +++ +DG + +IAG++GG+++ DNTT+V E A ++ ++ + K LG Sbjct: 298 VERTLD-DTMLMITDGVKSIAIAGVMGGQNSEITDNTTEVAFECASFNADSVRLTSKKLG 356 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--------IARNITYKPRK 403 + TDS RFE+G+DL+ + LI GT D I R I K Sbjct: 357 LRTDSSSRFEKGIDLERPQLAMDRACELITKYGFGTVIDDTKDTLKQELIKRVIEVDAVK 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + +++L G D+ I + +ILE+L F V E ++++P +R D+ D++EE+ Sbjct: 417 L------IQKL-GNDIEIGEIKKILEKLFFEVEVEGSILKITIPFYRDDITMSDDVLEEV 469 Query: 464 LRIYGVDQIKSEPL-PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI-SKEQS 521 RIYG + I S+ + + +K + + + +Y L S + EV+ +SFI K+ Sbjct: 470 ARIYGYNNIVSKNIDSVVTFGEKSEIKRFEDKVKY---ALMSNGLTEVITYSFIGEKDLD 526 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---EN 578 ++ + L+I+NP+ D S MRT+L+P ++ RN R F FE+ H + E Sbjct: 527 MINFPKDKILKIINPLGEDTSIMRTTLVPSMMNVVKRNFTRKNDYFYGFEIGHTFIKEEG 586 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + QK G +++D + D F K+ E Sbjct: 587 NVEPIQKRQLV------------GAVYADNA-------DFFTIKSMLEGAFENLGITRKY 627 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 E+ + +HP IKT +I LGY G+ HP IL+ + + + F + D + Sbjct: 628 EVENDN-ALFHPQICAKIKTQ-DITLGYVGQIHPLILEKYEIKKKVYLFVIDFDLLF--- 682 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + R K ++S +KRD+AF+ D+ + + ++I +N D +++ V +FD++ G Sbjct: 683 ENRQSIKLAKNVSKFPAIKRDIAFVTDEKVLCSQIEDLINQNADNIVESVELFDIYSGSQ 742 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +GKKS+A + + T D++++ + D+I+ + +K +A LR Sbjct: 743 VEKGKKSMAYSITYRADDRTLTDEEVKKVQDKILHELEEKFDAHLR 788 >gi|291297044|ref|YP_003508442.1| phenylalanyl-tRNA synthetase subunit beta [Meiothermus ruber DSM 1279] gi|290472003|gb|ADD29422.1| phenylalanyl-tRNA synthetase, beta subunit [Meiothermus ruber DSM 1279] Length = 784 Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 262/823 (31%), Positives = 407/823 (49%), Gaps = 59/823 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 MK SWLK+ L S E++ + L +GLE E + + A P +V +VL VE Sbjct: 1 MKIVYSWLKEFLPDAPSSERLEELLAGLGLETESI-TKLAPPPSRVVFGRVLQVENLEGK 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + L +D G QE+QV+ APN + G+ A PG+ +P+ + + VR I G+ES GM Sbjct: 60 EVRRLVVDIG--QEVQVISAAPNAKAGVGVALALPGTVLPDGSEL-RVRTIAGLESYGMA 116 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 S KEL + D + ++E +A P G L++ D +I+V +TPNR D + V G+A D Sbjct: 117 LSPKELGVGDYAGGLLEFAPEALPPGTPLAEAWG-PDEVIEVEITPNRPDWLSVYGVARD 175 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L A GL ++ S + +PL ++D C F + +GVR +P W+++R Sbjct: 176 LAALGLSLVRP---SPKPQTTPLPLPFGVWIEDPEGCDRFTLSYARGVRVGPSPLWVQRR 232 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A G+R IS +VD TNY L+ G P H +DA+ I + L VRRA +GEK++ LD QE L Sbjct: 233 LYAAGMRPISNVVDATNYAMLELGNPMHAYDAAFIREGLVVRRARNGEKLVTLDGQERTL 292 Query: 298 SPDNVVIA-SDG---RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 +++IA DG R +AG++GG + T+ V +EVA +DP+ + R+ + LG+ Sbjct: 293 DERDLLIAVKDGPQTRPAGLAGVMGGLEDEIRETTSAVALEVAHFDPVRVRRTARRLGLK 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR---NITYKPRKIVFMNSE 410 T++ YRFERGVD G + + L L GG + R N T I F + Sbjct: 353 TEASYRFERGVDKDGQLLAADRFMEL-LQAWGGPNVQVAQDRLDLNHTQPHPPIAFRPAY 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 RL G++ P +L RLG +V + + V+ PS R D+ + DLVEE+ R+ G Sbjct: 412 ASRLVGLEYPEATQAEVLRRLGCTVEPTDQAGVWAVTPPSHRVDLNIEEDLVEEVARVVG 471 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +QI + D + +K+V+A EV+N+S+ S E+ L Sbjct: 472 YEQIPTTLPSFFPHPDNLGVEAPYEANERLKQVMAGLGFQEVLNYSWSSPEECTLMRAPA 531 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-----FAIFEVSHVYENDTPEG 583 + + NP + D + +RT+L PGLL RN+ A+A F +FEV V+ + Sbjct: 532 PTVFMQNPQTPDRTALRTALYPGLL----RNLQTALAQGEEEPFLLFEVGKVFR----QV 583 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV--DLFDAKADALSVIEPFVSLDSLRFE 641 + A + G + G LW K F L +A A L +R E Sbjct: 584 ESLHLAALLCGDP-VPG---LW-QKGLGGGFFALKGLLEAAAHNLG--------SCVRVE 630 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 A + HPG SG + + + V G G HP I + L P+ FE+ ++P+S+ Sbjct: 631 KEAVPYLHPGISGAVYWNEQKV-GQIGALHPAIAEALELP-PVFLFEL---ALPLSR--- 682 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 + V ++ RDLA +V P + +I+ ++ + VFDV++GK L E Sbjct: 683 -GSGGFVDIARYPASMRDLAVVVPDATPYAEVERLIRAGAGEYLEKLEVFDVYRGKPLEE 741 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+A + + + T D + M I+ + +K A+ R Sbjct: 742 GQKSLAFHLSFRHPERTLTDPETDGFMQNIIAALEQKGFAIRR 784 >gi|227890810|ref|ZP_04008615.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus salivarius ATCC 11741] gi|227867219|gb|EEJ74640.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus salivarius ATCC 11741] Length = 805 Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 242/826 (29%), Positives = 423/826 (51%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL D++ D +++E++ + + +EV++ E L + K L V ++PD Sbjct: 1 MKVSTKWLNDYVKVDDLAVEELAEKIERTAVEVDETYRLEEGLKKIVVGKTLEVVKHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ++CGAPN+ + A G+ I N+ + K+RG S GM Sbjct: 61 DHLNICQVDVGEDEPIQIICGAPNIAANQKVIVALSGARIA-GNVKIKRGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +E+ S+ + I LP A G + +YL + + IIDV +TPNR D + + Sbjct: 120 ICALQEIGFSESVVPKEYADGIYVLPESAVPGEPVYNYLGMDEDIIDVDVTPNRGDMLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 RG+A D VAA G+ E+ + +E L IK L D L + + + V Sbjct: 180 RGVARD-VAAVYGR--ELTLPVGTVNEDDGLHIKDYLSVKADKELAPAYKLRVIDNVTVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TNY+ +D G P H FD ++I S L VR A GEKI Sbjct: 237 PSPMWLQKRLWNAGVRPINNVVDVTNYILMDYGQPLHSFDYNKINSKELVVRLAEQGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE +L ++VI + ++AG++GG + DDNTT V++E A++D +I ++ Sbjct: 297 TTLDDQERELQSGDIVITNGKDPIALAGVMGGANTEVDDNTTTVVLESAMFDSSSIRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVF 406 + I +++ RFERG++ + L + +LI L G A+ I ++I + + Sbjct: 357 RRENIHSEASMRFERGINRGTIEEALDYAANLIAELGDGKVATGIAQEQDIDVQDTTVEI 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ + G D+ + D I ERLGF V +F V+VP +R D+ ADL+EE+ RI Sbjct: 417 SLEKINNVLGTDLSVADVTDIFERLGFKVEENAGEFVVNVPPFRWDISIPADLIEEVARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KEQSVLF 524 YG D I + LP+ + + +Q R + +L + + + +++ + K + F Sbjct: 477 YGYDNIPA-TLPVGPTT-PGHYTYEQQVIRNTRAILEASGLTQAISYGLTTKVKAERFAF 534 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + E+ P+S+D + +R +L+ GLL N R + + A++E V+ +++ Sbjct: 535 EPAMKSTELDFPMSSDHTTVRMNLISGLLDDVSYNKARKVENVALYEQGRVFFRDEDSER 594 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +++AA + + IE + W DK R VD + K ++++ + + Sbjct: 595 PREVEHVAAAM---TGLIEDA--TWHDKK----RPVDFYVIKGIVQNLLDKVGVGSRVVY 645 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + A HPGR+ I E + G+ GE HP + + L + FE+ L + Sbjct: 646 TATAEHEEMHPGRTANIYIDGEFI-GFVGEVHPTLAKEYNLDR-VYVFELDLQKV----M 699 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + +K +V S P +KRD+A +V + I ++ IK N + V +FDV+ G+ Sbjct: 700 ELSKDLEVYEPVSKFPAIKRDIALLVAEDIQNSDIIKTIKENGGANLASVNIFDVYAGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G KS+A + + + T DD++ D++V + + AV+R Sbjct: 760 IDLGFKSLAYTLTFENKERTLTDDEVNKAFDKVVNKLQENYKAVIR 805 >gi|154493685|ref|ZP_02033005.1| hypothetical protein PARMER_03026 [Parabacteroides merdae ATCC 43184] gi|154086895|gb|EDN85940.1| hypothetical protein PARMER_03026 [Parabacteroides merdae ATCC 43184] Length = 821 Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 255/839 (30%), Positives = 418/839 (49%), Gaps = 55/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLKD+LD D+ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKDYLDFDLQPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGAEPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DA VG +Y + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPADAVVGTPAKEYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A K N+ P S ++ ++ I+ +++ C ++ +K V Sbjct: 181 GVARDLAAYLKQNGKPANLKRP-SVDAFKIDDEVPAIEVVVENKEACLRYSGITIKNVTV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ RLK +GLR I+ +VDITNY+ G P H FDA +I + + VR A G K Sbjct: 240 KESPEWLQNRLKVIGLRPINNVVDITNYILHGVGQPLHSFDADKIKGNKVVVRSATEGAK 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E L+ +++I + IAG+ GG +G + T +V +E A + P I ++ Sbjct: 300 FVTLDGVERTLTDRDLMICNVEEPMCIAGVFGGLDSGVTEQTKNVFLESATFHPTWIRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIV 405 + G+ TD+ +R+ERG+D + V+K LI + GGT + I + P ++ Sbjct: 360 ARRFGLNTDASFRYERGLDPNQTVEVMKRAALLIQEVAGGTITGAIQDIYPVPVAPYRVE 419 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEIL 464 +V L G +P+E ILE L ++ E + + VP +R DV+ D++E+IL Sbjct: 420 LTYDKVNTLIGKVIPVETVKSILESLEMKIVSETAEGLVIDVPVYRIDVQRDVDVIEDIL 479 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK------RVLASRAMMEVVNWSFISK 518 RIYG + ++ K NLS Q R K L E++N S Sbjct: 480 RIYGYNNVEFSD------NVKSNLSYQTPTDRSYKLQNLISEQLCGCGFNEILNNSLT-- 531 Query: 519 EQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +S + + ++NP+SAD++ MR +LL G L++ N R + FE Sbjct: 532 -RSAYYDNLSTYPVSHCVMLMNPLSADLNCMRQTLLFGGLESVEHNAKRKNGNIRFFEFG 590 Query: 574 HVYE---NDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADAL 626 + Y+ + EG+ +A G+ SG W+ +E+ +++ KA Sbjct: 591 NCYDYNIDHKKEGET-LAEFSEDYRLGLWVSGSRVDNNWAHPNEKSS----VYELKAYVE 645 Query: 627 SVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +++ V+L + F + A Y G S I TS+ LG G P I + + Sbjct: 646 NILVRLGVNLQKVIFGNLANDIYSAGLS--ITTSSGRQLGTMGIVSPKICKELDIETDVY 703 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 E+ ++ + + K++K +S VKRDLA ++++++ + I +R L+ Sbjct: 704 YAELSW-TLLMKEIKKSKV-TFSEISKFPAVKRDLALLLEKNVQFAEIEKIATESERKLL 761 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV +FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K A LR Sbjct: 762 KDVALFDVYEGKNLPAGKKSYAVSFYLQDEGKTLNDKQIDAIMKKIQTNLEQKLGAQLR 820 >gi|295399472|ref|ZP_06809454.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus thermoglucosidasius C56-YS93] gi|294978938|gb|EFG54534.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus thermoglucosidasius C56-YS93] Length = 804 Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 242/827 (29%), Positives = 432/827 (52%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 M + WL++++D T ++ +++ D +T G+EVE V+ N+ A + VL E++P+ Sbjct: 1 MFVSYKWLQEYVDLTGITAKELADRITKSGIEVESVEVLNKGA-KGVVVGHVLEREQHPN 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + +D G+ + +Q++CGAPNV G A G+ +P + + K+RG ES G Sbjct: 60 ADKLSKCLVDIGEGEPVQIICGAPNVAKGQKVAVAKVGAVLP-GGLKIKRAKLRGEESNG 118 Query: 117 MMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS E +L+ + + I P DAPVG + L L D ++++ LTPNR+DC+ Sbjct: 119 MICSLQELGIESKLVPKEYTDGIFVFPSDAPVGADALELLNLDDEVLELGLTPNRADCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + G+A + VAA LG+ N+ P++ E++ I +D +A VK V Sbjct: 179 MIGVAYE-VAAILGR----NVKLPVTEIQENGENVHDYISVRVDAPEDNPVYAGRIVKNV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 + +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +G Sbjct: 234 KIGPSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E I+ LD+ + L+ D++VI + ++AG++GG ++ D+TT V +E A + I Sbjct: 294 ETIVTLDDTKRTLTEDHLVITNGTEPVALAGVMGGANSEVRDDTTTVFIESAYFTSPAIR 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K+LG+ +++ RFE+G+D L +L+ GG + N T K +++ Sbjct: 354 KASKDLGLRSEASTRFEKGIDPARTKEALDRAAALMAEYAGGEVVGGVVEVN-TLKEQEV 412 Query: 405 VFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + + R+ G + ++ IL L F+ F ++VPS R+D+ + D++EE Sbjct: 413 TVTVTLDRINRVLGTAITKDEVAAILTNLQFAFTENNGTFTITVPSRRRDISIEEDIIEE 472 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + R+YG D++ + LP+ + + + L+ Q++ R V+R L + + + +S S E++ Sbjct: 473 VARLYGYDRLPA-TLPVAEAKPGK-LTPYQAKRRQVRRYLEDVGLFQAITYSLTSAEKAT 530 Query: 523 LFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----E 577 +F E + + P+S + S +R SL+P LL+ N R + + A++E VY E Sbjct: 531 MFALETAEPIRLALPMSEERSVLRQSLIPHLLEVASYNRARQVENVAVYETGAVYLASGE 590 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 N+ P +K AGI G LW + + VD + AK + E + Sbjct: 591 NELP-SEKERLAGIITGV----WHAHLWQGEK----KAVDFYVAKGILDGLFELLGLTNR 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + ++ HPGR+ I + V G+ G+ HP + + L FE+ L + + Sbjct: 642 IEYKQAKREHMHPGRTADILLDGKTV-GFVGQLHPVVQKEYDLKETYV-FELALADLLNA 699 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGK 756 + + + S + RD+A +VD+++ AG L II+ L+ +V++FDV++G Sbjct: 700 DVEDIRYAPIPRFPS---IARDIALVVDENVVAGELQKAIIEAGGSLLKEVSIFDVYKGD 756 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +GKKS+A + + T D+++ + +++++ V ++ A LR Sbjct: 757 RLPDGKKSIAFSLRYYDPERTLTDEEVTAVHEKVIQAVKQQFGATLR 803 >gi|317476204|ref|ZP_07935455.1| phenylalanyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] gi|316907615|gb|EFV29318.1| phenylalanyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA] Length = 820 Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 252/840 (30%), Positives = 420/840 (50%), Gaps = 57/840 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE V+ + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAA----GL-GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A GL LK+ ++ + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGLPTSLKKPSVDA-FAVENHDLDIKVTVENSEACPRYAGVTVKGVTV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 240 KESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVVVKTMPEGTP 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E LS +++I + IAG+ GG +G ++T D+ +E A + P + ++ Sbjct: 300 FVTLDGVERKLSERDLMICNKEEAMCIAGVFGGLDSGSTEDTKDIFLESAYFHPTWVRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPR 402 + G+ TD+ +RFERGVD + LK ++ L GGT S D+C A + Sbjct: 360 ARRHGLNTDASFRFERGVDPNITLYCLKLAAIMVKELAGGTISSDIKDVCAAPAQDF--- 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 ++ +V L G +P E I+ L ++ E + + VP +R DV+ D++E Sbjct: 417 RVELSYEKVHSLIGKVIPAETVKSIVASLEMKIVAETAEGLTLDVPPYRVDVQRDCDVIE 476 Query: 462 EILRIYGVDQIK----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 +ILRIYG + ++ + P T+ E ++ LQ V L E++N S Sbjct: 477 DILRIYGYNNVEIPTALKSSPTTKGEWDKSNRLQN----LVAEQLVGCGFNEILNNSLT- 531 Query: 518 KEQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 ++ + G + + ++NP+SAD++ MR SLL G L++ N +R +D FE Sbjct: 532 --RAAYYDGLESYPAKNLVMLMNPLSADLNAMRQSLLFGGLESISHNANRKNSDLRFFEF 589 Query: 573 SHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 + Y E PE K +A G+ +G+ S+ + +++ KA ++ Sbjct: 590 GNCYYFNEEKRNPE--KALAPYSEDYHLGLWVTGKRVSNSWAHQDEDSSVYELKAYVENI 647 Query: 629 IEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + + L + Y S ++T L FG +L F + N Sbjct: 648 FARLGLKMHDLVVGNLTDDIYAAALS--VQTRGGKRLATFGVVTRKLLKAFDIDN----- 700 Query: 688 EVYLDSIPISQ-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 EVY + + K K KV +S VKRDLA ++D+ + + I + +L Sbjct: 701 EVYYADLNWKELMKAIKNVKVNYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKL 760 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +V++FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 761 LKEVSLFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|295083959|emb|CBK65482.1| phenylalanyl-tRNA synthetase beta subunit [Bacteroides xylanisolvens XB1A] Length = 820 Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 244/837 (29%), Positives = 426/837 (50%), Gaps = 51/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGRQATLQRPSVDGFKVENQDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKQEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D G+I LK ++ L GGT +S+I +++ P + Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEI---KDVFTTPAQDFI 417 Query: 407 MN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 ++ +V L G +P+E I+ L + E + ++VP +R DV+ D++E+ Sbjct: 418 VDLAYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILRIYG + ++ +P T + + ++ ++ ++A + E++N S Sbjct: 478 ILRIYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT-- 531 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ + G + +LNP+SAD++ MR +LL G L++ N +R AD FE Sbjct: 532 -RAAYYDGLEAYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFG 590 Query: 574 HVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + Y D +K +A G+ +G+ S+ +++ KA ++++ Sbjct: 591 NCYYFNADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKR 650 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L +L + + S + T L FG +L F + N EVY Sbjct: 651 LGLDLHNLVIGNLTDDVFAAALS--VNTKGGKRLASFGIVTKKLLKAFDIDN-----EVY 703 Query: 691 LDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 + + K ++ K+ + +S VKRDLA ++D++I + I + +L+ + Sbjct: 704 YADLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNIQFAEIEKIAYETEKKLLKE 763 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 764 VELFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|261207740|ref|ZP_05922425.1| phenylalanyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289565815|ref|ZP_06446257.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium D344SRF] gi|294614011|ref|ZP_06693941.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] gi|294618398|ref|ZP_06697975.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] gi|260078123|gb|EEW65829.1| phenylalanyl-tRNA synthetase [Enterococcus faecium TC 6] gi|289162358|gb|EFD10216.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium D344SRF] gi|291593118|gb|EFF24697.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1636] gi|291595348|gb|EFF26664.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1679] Length = 806 Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 237/831 (28%), Positives = 427/831 (51%), Gaps = 53/831 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE V E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGVTVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLLESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEIFVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + K + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 355 TAKQFNLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ Sbjct: 415 KISLERINQYLGTSLVVKEVNEIFEALGFSYEEKEHVYSVVVPPRRWDIQIEADIIEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F Sbjct: 475 RIYGYDQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT- 580 + + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END Sbjct: 533 VINESNITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDPC 592 Query: 581 ---PEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLD 636 P+ K+ A I SGI W +K + + + VD F K ++ E + Sbjct: 593 THLPQEVKHAAIAI----SGI------WEEKDWQTKAQNVDFFTIKGLLENLFEQLGITE 642 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + +++ HPGR+ I E +G+ G+ HP I + + E Y+ Sbjct: 643 DVHYQTVTEMKEMHPGRTAAIYL-GEKFIGFVGQVHPTIAKSYDIP------ETYVAEFD 695 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDV 752 +S K +V ++ V RD+A +V + + L +I++ R + D+ +FDV Sbjct: 696 LSAVVEAAQKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIQLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QG+++ +G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 756 YQGENIEKGHKSMAYSLTFVNPEATLTDEEINKGMEKVEKALVENLEASIR 806 >gi|293366879|ref|ZP_06613555.1| phenylalanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W2(grey)] gi|291319180|gb|EFE59550.1| phenylalanyl-tRNA synthetase [Staphylococcus epidermidis M23864:W2(grey)] gi|329730012|gb|EGG66403.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus epidermidis VCU144] gi|329734433|gb|EGG70746.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus epidermidis VCU045] Length = 800 Score = 326 bits (836), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 238/821 (28%), Positives = 417/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +PD D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKKLVVGHVLSKTPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + + L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKNYESGIYVFPEAVKPGTDALEAIYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVTALYQTKMNKPQLTSNESQESAKDELTIEVKNEDKVPYYSTRVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVTEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYASGTVLKDRVSHGDLGSFVTPIEITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G ++ E+ + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNRTIGFNLTDEEIIDIFEQLGFDTENKNGEITVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 I S LP+ + L+ +Q +TR VK L + + + +S +SK + F R Sbjct: 480 DIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLDQAITYSLVSKNHATDFALQNRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + K V+E +L+F+ +G Sbjct: 599 YL-SGILTG----DFVNNTWQSKKES----VDFYLTKG----VVERIAEKLNLQFDFRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 646 QIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + V RD+A V+ + + L++II +N + +++D VFDV++G+ L +GK Sbjct: 704 YEPIPRFPG---VTRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 761 KSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|255019928|ref|ZP_05292002.1| Phenylalanyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] gi|254970587|gb|EET28075.1| Phenylalanyl-tRNA synthetase beta chain [Acidithiobacillus caldus ATCC 51756] Length = 796 Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 251/819 (30%), Positives = 402/819 (49%), Gaps = 48/819 (5%) Query: 1 MKFTLSWLKD-HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNP 56 M+ ++ WL++ LD+ S +++ ++LT G+EVE +D A SP + V +V +P Sbjct: 1 MQISIQWLREAWLDSSWSTQRLAESLTMGGIEVEAIDR--AASPLPGVVVAAVRTVRSHP 58 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + I +D G + QVVCGA N+R G A PG+ +P ++ + ++RG+ S Sbjct: 59 QAEKLRIAEVDAGDGRLRQVVCGAANLRPGQCVPLALPGALLP-GDVHIQETELRGVRSE 117 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L+D S+ ++EL AP+G L DYL L D I+ + +TPNR D GIA Sbjct: 118 GMLCSAAELNLADGSSGLLELDAQAPLGHALYDYLRLDDEILTLGITPNRGDAFSYLGIA 177 Query: 176 LDLVAAGLGKLKEIN---ISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNN 228 DL A G G L+ +S ++ PL +I + + C + ++ + Sbjct: 178 RDLSALGAGMLRAWQPQAVSWAQQAQRAPLGERLQIAVEPAAAQACPRYHALLLEDLPTR 237 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 + P+ +R+RL+ G R ++ +VD N L G P H FDA +I LTVR A SGE + Sbjct: 238 L-PDHLRERLRRSGQRQVAPVVDWLNLQMLALGQPMHAFDADQIRGGLTVRWARSGEILD 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 ALD ++ L D +VIA D ++AGIIGG+ D+T +++E A + + + Sbjct: 297 ALDGRDRILESDMLVIADDEGPVALAGIIGGRRTAVHDDTRRIVLESAYFQAKAVQGRAR 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 LG+ T++ RFERGVD + +P + T + N I + Sbjct: 357 RLGLQTEAAMRFERGVDFRLGLPAAVATWQSMAHHARVTVLASAMVANAEPDLPWIPLRS 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 V R+ G P E IL LG SV + + + V PS R D+ +ADL+EEI RI Sbjct: 417 QRVARILGFAPPAERIREILSALGCSVEAQGEGSWRVQPPSHRYDLRIEADLIEEIARIS 476 Query: 468 GVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G DQ+ + +PL L + R ++ L +R EV+ +SFIS E F Sbjct: 477 GYDQLPQRQPLGLLAPHPL----APEPRAEALRAFLVARDYHEVITYSFISAEAQARFCP 532 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + NP+S D++ +R SL PGLL+A NV+R +FE+ ++ T Q+ Sbjct: 533 DDEPVALRNPLSNDLAVLRGSLWPGLLQALQFNVNRQQERVRLFEMGRIF---TGAQQRL 589 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 AG+ G + E WS S + D +D + D ++ + +LD S P+ Sbjct: 590 QLAGVIHGPALPEH----WSGPSP----WCDFYDLRGDVEGLLRHWQTLDLEYRRSCNPN 641 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S + + LG G PN+ + + L F YLD ++ K K+ Sbjct: 642 -LHPGQSADLWLDGSL-LGSIGALRPNLHERYELDK--AAFLFYLDLEALA--KHGKSVH 695 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 + S ++RDLA IV + I AG ++ ++ R + + +FD +QG + G + Sbjct: 696 FQPIPSQPGLRRDLALIVPEGISAGQVLRTVREAASRAVREHWIFDRYQGSQVAPGHYGL 755 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +L+Q +D R L + V+ +++ A LR+ Sbjct: 756 GVGLLLQ--------EDDRTLTESEVQGELERILAALRT 786 >gi|154686998|ref|YP_001422159.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus amyloliquefaciens FZB42] gi|154352849|gb|ABS74928.1| PheT [Bacillus amyloliquefaciens FZB42] Length = 804 Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 241/829 (29%), Positives = 416/829 (50%), Gaps = 52/829 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL+D++D + + + +T G+EVE ++ + E + I VL E++P+ Sbjct: 1 MFVSYKWLEDYVDLQGIDPAVLAEKITRAGIEVEGIEYKGEGVKGVVIGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + D G + +Q++CGAPNV G A G+ +P N + K+RG S Sbjct: 61 DKLNKCLV---DIGAEEPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKKAKLRGEAS 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I P DA G L+L D I+++ LTPNR+D Sbjct: 117 HGMICSLQELGIESKLVAKEYAEGIFVFPNDAETGADAMAALQLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + + G+A + VAA LG KL E + + + +K ++D+ +A +K V Sbjct: 177 MNMLGVAYE-VAAILGAEVKLPEASYEKAAEKAADAVSVK--VEDTQANPHYAAKIIKNV 233 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 + +P WM+ +L G+R + +VDITN+V L+ G P H FD R S + VR+A Sbjct: 234 KIGPSPLWMQTKLMNAGIRPHNNVVDITNFVLLEYGQPLHAFDYDRFGSKEVVVRKAAEN 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E I+ LD QE LS ++VI + + Q++AG++GG + ++TT +L+E A +D + Sbjct: 294 ETIVTLDEQERKLSSSHLVITNGKKAQAVAGVMGGAESEVREDTTAILLEAAYFDGQTVR 353 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRK 403 ++ ++LG+ +++ R+E+G+D ++ + SLI + GG + N + + Sbjct: 354 KASRDLGLRSEASARYEKGIDPARVLLAAERACSLIQAYAGGEVLSGTVEENHLKIEANN 413 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 I +V + G+ + E+ + I +RLGF+V D V+VPS R D+ + DL+EE Sbjct: 414 IHVSVEKVNAVLGMTIAKEEIISIYKRLGFAVGEAEDVLVVTVPSRRGDIRIEEDLIEEA 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+YG D I S LP T L+ Q++ R V+R L + + +S + +++ Sbjct: 474 ARLYGYDNIPS-TLPET-AGTTGGLTPYQAKRRKVRRFLEGAGLSQATTYSLTNDKKAAA 531 Query: 524 FGGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 F + +L P+S + S +R SL+P LL+A N+ R A++E V+ E + Sbjct: 532 FAIEKSFNTMLALPMSEERSILRHSLVPNLLEAVSYNLARQTDSVALYETGSVFLTKEEN 591 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 T +K AG + G R LW + + VD F AK ++ D Sbjct: 592 TKPVEKERVAG------AVTGLWRKNLWQGEK----KPVDFFVAKGIVEGLLHQLNVSDR 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + F HPGR+ I + + G+ G+ HP + + E Y+ + + Sbjct: 642 VEFVQSERKNMHPGRTANILLNGSLA-GFIGQVHPAMEKELDIK------ETYVFELDLH 694 Query: 698 QKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ 754 +T+ VV+ + V RD+A + D+ + +G L +IK L+ +VTVFDV++ Sbjct: 695 ALLTEETEPVVYTPIPKYPSVTRDIALVADKTVTSGQLEAVIKEAGGALLKEVTVFDVYE 754 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + EGKKSVA + + T ++++ + + +++ + + AVLR Sbjct: 755 GEHMEEGKKSVAFSLQYVNPEQTLTEEEVTKVHENVLKALEETYQAVLR 803 >gi|254974315|ref|ZP_05270787.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-66c26] gi|255091711|ref|ZP_05321189.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile CIP 107932] gi|255099814|ref|ZP_05328791.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-63q42] gi|255305699|ref|ZP_05349871.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile ATCC 43255] gi|255313439|ref|ZP_05355022.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-76w55] gi|255516127|ref|ZP_05383803.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-97b34] gi|255649223|ref|ZP_05396125.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-37x79] gi|260682397|ref|YP_003213682.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile CD196] gi|260685996|ref|YP_003217129.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile R20291] gi|306519326|ref|ZP_07405673.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-32g58] gi|260208560|emb|CBA61234.1| phenylalanyl-tRNA synthetase beta chain [Clostridium difficile CD196] gi|260212012|emb|CBE02556.1| phenylalanyl-tRNA synthetase beta chain [Clostridium difficile R20291] Length = 797 Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 244/831 (29%), Positives = 407/831 (48%), Gaps = 60/831 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL+D++D D+ +++ D +T G +VE +D E + + K+L ++++P+ D Sbjct: 1 MLVSLKWLRDYVDIDMDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA N+ G A GS +P + + RG S GMM Sbjct: 61 KLVVTKVDIG-DKVVQIVTGATNISEGDYIPVAVNGSKLP-GGVEIKQTDFRGELSDGMM 118 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + + I++ +G + D L L D +ID LT NR DC Sbjct: 119 CSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLKDALIDFELTSNRPDCKC 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + GIA + A K+K I S E I + K ++D+ LC+ + V V+ + Sbjct: 179 MMGIAREAAATIGTKVKYPEIEVKESDEEI--DFKVEIDNPDLCRRYVARMVTDVKIEPS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++RL G+R IS +VDITN+V L+ G P H FD +++ + + VR A GEK++ Sbjct: 237 PYWMQRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRNAKDGEKLVT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L D +VI + + +AG++GG ++ NT VL E A + P NI + K Sbjct: 297 LDDVERTLDKDMLVITNGEKSLGLAGVMGGANSEITSNTKTVLFESANFKPENIRMTAKK 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 +GI +++ R E+ +D L+ L G + +P+K+V Sbjct: 357 VGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNP 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G+DVP+E + ILE L F + DK E+ VPS+R D+E++AD+ EEI RIY Sbjct: 417 QRINHLLGVDVPMEQFVGILESLEFKCNLVANDKLEIDVPSFRTDMEQEADVWEEIARIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFISKEQ---- 520 G + I P Q+E ++ S+ +++ K + + E++ +SF+S + Sbjct: 477 GFENI-----PSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDKI 531 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 V G +R ++LNP+ + S MRT+L+P +L NV I + + FE H++ Sbjct: 532 RVPEGNAKRNFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIPQ 591 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 +++ P+ + M G+ + VD F K + I V Sbjct: 592 DSELPKEENRMCVGM--------------------YGKDVDFFALKG-TIETILVNVGFK 630 Query: 637 SLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 E + +HPGR I + + V G GE HP++++ + L + E+ +D + Sbjct: 631 GYEIEPQDNNTTFHPGRCAKIVYNNKYV-GTLGELHPDVIENYNLGQRVYVAEIDIDFV- 688 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ 754 +TK V L RD+A IV + + +IIK N L++ +FDV++ Sbjct: 689 --FDNSDRTKNYVPLPKYPSTSRDIALIVKDDVFVKQIEDIIKENGQGLVESYKLFDVYK 746 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 G + G KS+A + + T D+D+ + D+I+ + +K NA LRS+ Sbjct: 747 GSQIEAGYKSIAYSITYRSKDKTLTDEDVAKVHDKILSELSEKLNANLRSN 797 >gi|297562007|ref|YP_003680981.1| phenylalanyl-tRNA synthetase subunit beta [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296846455|gb|ADH68475.1| phenylalanyl-tRNA synthetase, beta subunit [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 828 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 260/849 (30%), Positives = 398/849 (46%), Gaps = 66/849 (7%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVE--- 53 M+ LSWL++++D V + ++ LT GLEVE VD + P +VL +E Sbjct: 1 MRVPLSWLREYVDLPVGTTARELAGRLTLAGLEVETVDELGSDITGPIVYGRVLEIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N G L V PG+ +P + Sbjct: 61 GFKKPIRYC---RVDVGGANGTGEPQEI--VCGARNFSEGDLVVVCLPGAELP-GGFRIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPN 164 RK G S GM+CS EL L +D + I+ LP VG L L + ++D+++TP+ Sbjct: 115 ARKTYGRMSAGMICSASELGLWEDHSGIIVLPEGFGAVGEDAIGPLGLREDVLDIAVTPD 174 Query: 165 RSDCIGVRGIALDLVA-AGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCV 222 R + +RG+A D A G+ +++ S E P EI D +LC + + Sbjct: 175 RGYALSLRGVARDAAALYGVDFHDPADVAVAESGGEGHPAEI-----DPALCDRYVLRGA 229 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G + +P WM++RL G+R IS VD+TNYV L+ G P H +D +++ L VR A Sbjct: 230 TGFDPDAPSPLWMKRRLHQCGVRPISLAVDVTNYVMLELGQPLHAWDRAQLRGALRVRAA 289 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GEK+ LD+ + L D++VIA D +IAG++GG +T+VLVE A +D + Sbjct: 290 EAGEKLETLDHVQRSLDTDDIVIADDSGPVNIAGVMGGLTTEISLTSTEVLVEAAHFDAM 349 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +IAR+ + + ++S RFERGVD + V L+ L G T + T Sbjct: 350 HIARASRRHQLSSESSRRFERGVDSAVQLAAATRAVELLAELGGATVETAYTHLDRTAAR 409 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 + S ++G+D P + R L +G V + D V PSWR D+ + DL E Sbjct: 410 EPVTVRASHAGAVAGVDYPEGTTQRWLRAVGCEVEADGDLLRVVPPSWRPDITDPNDLAE 469 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-- 519 E++R G + I S + R L+ Q R V R LA EV+N+ F+ + Sbjct: 470 EVIRFEGYENIPS----IRPRASGRGLTASQRLRRAVGRALAGTGFHEVLNYPFVGERDL 525 Query: 520 ---QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 Q + L + NP++ +RT+LLPGL KA RN R D A++E VY Sbjct: 526 DGLQLAADDDRRDALRLANPLNEGEPLLRTTLLPGLFKALARNTGRGFTDVALYETGLVY 585 Query: 577 ENDTPEGQKYMAAGIRKGSSG-----IEGS--------GRLWSDKSEERCRFVDLFDAK- 622 P + + +G IE + G + S +E + +A Sbjct: 586 -RPRPGAPRAPMLAVDRGPDAEELARIEAALPDQPRRVGAVISGHAERAGWWGPGREAGW 644 Query: 623 ADALSVIEPFVSLDS--LRFESGAPSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDF 677 ADA+ + L E+ + +HPGR + + +++G+ GE HP + Sbjct: 645 ADAVQTARDVARVAGVELEVEADQHAPWHPGRCAALYVRVDGERLLVGHAGELHPRTVQA 704 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTL-VN 735 FGL EV LD I +R +T S +PV +D+A +VD +P G + Sbjct: 705 FGLPERTAAVEVELDRI-----ERARTPVTAPEISTYPVATQDVALVVDSSVPVGRVSAA 759 Query: 736 IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + + L++ V +FDV+ G +GEG KSVA + + T ++ D V Sbjct: 760 LAEGAGELLESVRLFDVYTGDQVGEGSKSVAFALRFRAADRTLTAEEAGAARDAAVALAT 819 Query: 796 KKTNAVLRS 804 ++T AVLR Sbjct: 820 ERTGAVLRG 828 >gi|69246352|ref|ZP_00603908.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|293569782|ref|ZP_06680869.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] gi|68195305|gb|EAN09756.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium DO] gi|291587530|gb|EFF19407.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E1071] Length = 806 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 236/831 (28%), Positives = 427/831 (51%), Gaps = 53/831 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE V E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGVTVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEIFVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRR 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKI 404 + K + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 355 TAKQFNLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ Sbjct: 415 KISLERINQYLGTSLVVKEVNEIFEALGFSYEEKEHVYSVVVPPRRWDIQIEADIIEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F Sbjct: 475 RIYGYDQLPS-TLPSGET-VAGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQF 532 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT- 580 + + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END Sbjct: 533 VINESNITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDPC 592 Query: 581 ---PEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLD 636 P+ K+ A + SGI W +K + + + VD F K ++ E + Sbjct: 593 THLPQEVKHAAIAV----SGI------WEEKDWQTKAQNVDFFTIKGLLENLFEQLGITE 642 Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + +++ HPGR+ I E +G+ G+ HP I + + E Y+ Sbjct: 643 DVHYQTVTEMKEMHPGRTAAIYL-GEKFIGFVGQVHPTIAKSYDIP------ETYVAEFD 695 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDV 752 +S K +V ++ V RD+A +V + + L +I++ R + D+ +FDV Sbjct: 696 LSAVVEAAQKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIQLFDV 755 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QG+++ +G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 756 YQGENIEKGHKSMAYSLTFVNPEATLTDEEINKGMEKVEKALVENLEASIR 806 >gi|167762819|ref|ZP_02434946.1| hypothetical protein BACSTE_01177 [Bacteroides stercoris ATCC 43183] gi|167699159|gb|EDS15738.1| hypothetical protein BACSTE_01177 [Bacteroides stercoris ATCC 43183] Length = 820 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 238/832 (28%), Positives = 408/832 (49%), Gaps = 41/832 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE V+ + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTVKGGLEGLVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGA NV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K + P + ++ L+I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGKPAALKKPSVETFAVDNHDLDIRVTVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVIVKTLPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L+ +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 TTLDGVERKLNGRDLMICNREEPMCIAGVFGGLDSGSTETTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERGVD + LK ++ L GGT S D+C A + + Sbjct: 361 RRHGLNTDASFRFERGVDPNATLYCLKLAALMVKELAGGTISSDIKDVCAAPARDF---R 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 + +V L G ++P E I+ L ++GE + + VP +R DV+ D++E+ Sbjct: 418 VELSYGKVHALIGKEIPAETIKSIVTSLEMKIVGETAEGLTLDVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 ILRIYG + ++ + + K V L E++N S ++ Sbjct: 478 ILRIYGYNNVEIPTALKSSLTTKGECDKSNRLQNLVAEQLVGCGFNEILNNSLT---RAA 534 Query: 523 LFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 + G + + ++NP+SAD++ MR +LL G L++ N +R AD FE + Y Sbjct: 535 YYDGLESYPAKNLVMLMNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFGNCYY 594 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 E PE K +A G+ +G+ S+ + +++ KA ++ Sbjct: 595 FNEEKRNPE--KALAPYSEDYHLGLWITGKRVSNSWAHQDEDSSVYELKAYVENIFARLG 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + L + Y S ++T L FG +L F + N + + L+ Sbjct: 653 LQMHDLVVGNLTDDIYAAALS--VQTKGGKRLATFGVVTRKLLKAFDIDNEV--YYADLN 708 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 + + R +S VKRDLA ++D+ + + I + +L+ +V++FD Sbjct: 709 WKELMKAIRNVKVNYTEISKFPAVKRDLALLIDKKVQFAEIEKIAYETEKKLLKEVSLFD 768 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++GK+L GKKS A+ L+Q T D I +M +++ N+ + AVLR Sbjct: 769 VYEGKNLEAGKKSYAVSFLLQDENATLNDKQIDKVMQKLIANLQNRLGAVLR 820 >gi|108799939|ref|YP_640136.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium sp. MCS] gi|119869049|ref|YP_939001.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium sp. KMS] gi|108770358|gb|ABG09080.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium sp. MCS] gi|119695138|gb|ABL92211.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium sp. KMS] Length = 832 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 251/838 (29%), Positives = 412/838 (49%), Gaps = 84/838 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL++ + DVS E++ TL IG EVE V ++ P + +V +E Sbjct: 1 MRLPYSWLREVVAAGAPGWDVSAEELEQTLIRIGHEVEDVLPVGPVTGPLIVGRVAEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I +++D G+ + +VCGA N VG L V A PG+ +P + + RK G Sbjct: 61 LTEFKKPIRAVKVDVGEPENRDIVCGATNFAVGDLVVVALPGATLP-GDFTIATRKTYGR 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL L D + I+ LP A G ++ L L D + D+++TP+R C+ V Sbjct: 120 TSDGMICSTAELNLGADHSGILVLPPGTAAPGTPAAEVLGLDDTVFDLAITPDRGYCLSV 179 Query: 172 RGIA--------LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 RG+A LD V E + P+ E++P+ I D + F + V Sbjct: 180 RGMAREIACAYDLDYVDPAFDP--ERVPALPVEGEALPVAI----DPGTGVLRFGLRPVT 233 Query: 224 GV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ V+P WM++RL G+R+IS VD+TNYV L+ G+P H D S I+ VR A Sbjct: 234 GIDPAAVSPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDRSLITGGFRVRFAE 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE ++ LD+ E L P +V+I D +I G++G + TTDVL+E A+WDP Sbjct: 294 PGETVVTLDDIERRLDPADVLIVDDEATAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAA 353 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNI 397 ++R+ + L + +++ R+ER VD + L +L+ + GG Sbjct: 354 VSRTQRRLRLASEAGRRYERTVDPAISVAALDRCAALLADIAGGAVEPRLTDWRGDPPRE 413 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 + P + R +G+D P + R L ++G V + D+ PSWR D+ + A Sbjct: 414 DWSPPPVSMALDRPDRTAGVDYPPGTTERRLTQIGAVVRVDGDRVTAVPPSWRPDIRQPA 473 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DLVEE+LR+ G++QI S L R L+ Q R R + + LA +E++ F+ Sbjct: 474 DLVEEVLRLEGLEQIPSV---LPAAPAGRGLTAVQKRRRAIGKSLALSGYVEILPTPFLP 530 Query: 518 KEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 ++G + ++LNP+ AD ++ T+LLPGLL+A RNV R AD A+F + Sbjct: 531 AGVFDVWGLADDDPRRATTQVLNPLEADRPHLATTLLPGLLEALARNVSRGAADAALFAI 590 Query: 573 SHVYE------------NDT--------------PEGQKYMAAGIRKGSSGIEGSGRLWS 606 + V E ND P +++ A + +G+ W Sbjct: 591 AQVVEPTEDTRAVERIPNDRRPTDDEIATLDASLPRQPQHVGAVL----TGLREPAGPWG 646 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 R R V+ DA + + ++ ++ +LR P +HPGR + + V+G Sbjct: 647 -----RGRPVEAADA-FEMVRIVGRAAEVEFTLRSAQRLP--WHPGRCAEVLIG-DTVVG 697 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + G+ HP +++ GL C E+ LD++PI+++ +S V +D++ IVD Sbjct: 698 HAGQLHPAMVERAGLPKGTCAVELDLDAVPITER-----LPAPRVSPFPAVFQDVSLIVD 752 Query: 726 QHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + A ++V +++ L++DV +FDV+ G +GEG+KS+A+ + + T +D+ Sbjct: 753 DDVAAQSVVEAVRSGAGELLEDVRLFDVYTGPQIGEGRKSLALALRFRAADRTLTEDE 810 >gi|255326336|ref|ZP_05367420.1| phenylalanyl-tRNA synthetase, beta subunit [Rothia mucilaginosa ATCC 25296] gi|255296553|gb|EET75886.1| phenylalanyl-tRNA synthetase, beta subunit [Rothia mucilaginosa ATCC 25296] Length = 856 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 246/833 (29%), Positives = 404/833 (48%), Gaps = 76/833 (9%) Query: 1 MKFTLSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + D S E + TL +GLE E V + E P + +VLS+E Sbjct: 1 MRVPLSWLREFVPVAEDASAEDLMATLVKVGLEEEDVHRPSDELSGPIVVGQVLSMEPET 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N + G V PG+ +P Sbjct: 61 HSNGKTVNWCQVRVVPEGQEQTLTGKGIEPSGVQGIICGAHNFKPGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 + RK G +S GM+ S +EL + DD I+ L +D +G + L L D Sbjct: 120 GGFEITARKTYGHKSAGMIASTRELGIGDDHGGILVLSTLGLDPELGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS----CPLSSES-IPLEIKFD--LD 209 +V++TP+R +RGIA + A ++ ++ P ++++ P+ ++ D + Sbjct: 180 AEVNVTPDRGYAFSLRGIAREWCHATGSSFEDFVLAYGERAPEANDAGHPVVLRDDAPIH 239 Query: 210 DSSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 + C F M V GV+ + P WM RL+ G+RS+S VDI+NYV L+ G P H +D Sbjct: 240 GNPGCVRFVMREVSGVKADAPVPTWMSSRLRLAGVRSLSLPVDISNYVMLETGQPLHFYD 299 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A ++ + VRRA +GEK++ LD E L P+++VIA D + +AG++GG D+T Sbjct: 300 ADKVQGEIVVRRAAAGEKLVTLDGVERTLHPEDIVIADDSGVIGLAGVMGGASTEVTDST 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T +LVE A +D +++AR+ + +I++S RFERGVD Q + V L++ L G Sbjct: 360 TRILVESARFDEVSVARTARRHKLISESSKRFERGVDPQIQAAAAQRAVELLVGLAGAQV 419 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPS 448 ++ Y+P I G+D E L +G SV + V+VPS Sbjct: 420 EPGVTDVSLGYEPVVIDLPADYTAGRIGVDYSPEQIESCLREIGCSVERTESGYAVTVPS 479 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 WR D+ K DL EEI RI G + I S LP+ R + +Q+ R LA+ + Sbjct: 480 WRTDLRAKEDLTEEIARIDGYENIPST-LPVAPA--GRGYTPEQAGKRRALNALAASGLT 536 Query: 509 EVVNWSFISKEQSVLFGGGQ-----------RELEILNPISADMSNMRTSLLPGLLKATG 557 EV + F+S + + L+ + + NPIS+ MR SLLPGL++ Sbjct: 537 EVFAYPFVSADANNLWSAPWVSTPENPVTEVPSVRLENPISSAEGWMRRSLLPGLVEVLK 596 Query: 558 RNVDRAIADFAIFEVSHVY--------ENDTPEGQKY-------MAAGIRKGSSGIEGSG 602 RN+ R + AIFE HV+ E+ P G + + AGI + + I G Sbjct: 597 RNLSRGFKNLAIFEAGHVFIPGEQLGSESIPPLGARPSDEVLADLNAGIPQQPTFIAG-- 654 Query: 603 RLWSDKSEE-----RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 L++ E R D DA DA+ ++ VS + ++ +G + +HPGR + Sbjct: 655 -LFAGTEHEVMPGAAPRAFDWRDA-LDAVRLVAAAVSAE-IQVRNGVHTAFHPGRVAEVL 711 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 A +G+ GE HP +L L C FE+ ++ R + ++ + + Sbjct: 712 NVAGERVGFAGELHPKLLQELNLPERTCAFELDFSAL---FAGRVEARQATPVLTFPAAT 768 Query: 718 RDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 +D+A +VD+++PA + +++ L++D+ VFD ++G + + KKS+A + Sbjct: 769 QDVALLVDRNLPASEVERVLREGAGELLEDIRVFDDYRGTGIDDSKKSLAFAL 821 >gi|251810587|ref|ZP_04825060.1| Phe-tRNA synthetase beta chain [Staphylococcus epidermidis BCM-HMP0060] gi|282876413|ref|ZP_06285280.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis SK135] gi|251805747|gb|EES58404.1| Phe-tRNA synthetase beta chain [Staphylococcus epidermidis BCM-HMP0060] gi|281295438|gb|EFA87965.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis SK135] Length = 800 Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 239/821 (29%), Positives = 417/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +PD D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKKLVVGHVLSKTPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKNYESGIYVFPEAVKPGTDALEALYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVAALYQTKMNKPQLTSNESQESAKDELTIEVKNEDKVPYYSARVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVTEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYASGTVLKDRVSHGDLGSFVTPIEITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G ++ E+ + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNRTIGFNLTDEEIIDIFEQLGFDTENKNGEIIVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 I S LP+ + L+ +Q +TR VK L + + + +S +SK + F R Sbjct: 480 DIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLNQAITYSLVSKNHATDFALQNRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + K V+E +L+F+ +G Sbjct: 599 YL-SGILTG----DFVNNTWQGKKES----VDFYLTKG----VVERIAEKLNLQFDFRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 646 QIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + V RD+A V+ + + L++II +N + +++D VFDV++G+ L +GK Sbjct: 704 YEPIPRFPG---VTRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 761 KSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|262282551|ref|ZP_06060319.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] gi|262261842|gb|EEY80540.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus sp. 2_1_36FAA] Length = 801 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 241/824 (29%), Positives = 431/824 (52%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVISCENVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVQFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG +T V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGATTEISGKSTRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I +L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEGLDAAASMIANLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIEDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEDL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A + Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLAAEYVASN 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQPV-GFVGQVHPATSKAYDIP------ETYVAELNLSAIEEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I+ + RL D+ +FD+F G LG Sbjct: 699 QPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGIKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++++K A +R Sbjct: 758 VGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLIEKLGAEVR 801 >gi|327461427|gb|EGF07758.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1] Length = 801 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 243/825 (29%), Positives = 430/825 (52%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + + G Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMSG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + +S +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFLLVENEKQAADSLSVALETEKASY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG+ +T V++E A++ +I ++ Sbjct: 296 LDGEERELEASDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFGGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFGGG 527 D++ + LP + QQ R R R LA A + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLRRRV--RTLAEGAGLTEIITYALTTPEKAVEFTLN 532 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 L E++ P++ + S +R +++ G+L + NV R + A++E+ ++E T ++ Sbjct: 533 PSNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKIFEQ-TGNPKEE 591 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I + + G L ++K + + VD F AK V+E + L E A Sbjct: 592 LPNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYAAS 644 Query: 646 SW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKK 700 + HPGR+ +I + + V G+ G+ HP + + E Y+ + +S +++ Sbjct: 645 NQIKSLHPGRTALISINGQPV-GFVGQVHPATAKAYDIP------ETYVVELNLSAIEEQ 697 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSL 758 + ++ V RD+A ++ I +++ I V RL D+ +FD+F G L Sbjct: 698 LQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAILAAGVKRLT-DIKLFDIFSGDKL 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 757 GVGLKSMAYSLTFQNPESSLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|260174493|ref|ZP_05760905.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. D2] gi|315922760|ref|ZP_07919000.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696635|gb|EFS33470.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 820 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 244/837 (29%), Positives = 427/837 (51%), Gaps = 51/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP +A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPENAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + K+ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D +I LK ++ L GGT +S+I +++ P + Sbjct: 361 RRHGLNTDASFRFERGIDPNSVIYCLKLAALMVKELAGGTISSEI---KDVFTTPAQDFI 417 Query: 407 MN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 ++ +V L G +P+E I+ L + E + ++VP +R DV+ D++E+ Sbjct: 418 VDLAYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILRIYG + ++ +P T + + ++ ++ ++A + E++N S Sbjct: 478 ILRIYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT-- 531 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ + G + +LNP+SAD++ MR +LL G L++ N +R AD FE Sbjct: 532 -RAAYYDGMETYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFG 590 Query: 574 HVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + Y + D +K +A G+ +G+ S+ +++ KA ++++ Sbjct: 591 NCYHFDADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKR 650 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L +L + + S I T L FG +L F + N EVY Sbjct: 651 LGLDLHNLVVGNLTDDIFAAALS--INTKGGKRLASFGIVTKKLLKAFDIDN-----EVY 703 Query: 691 LDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDD 746 + + K ++ K+ + +S VKRDLA ++D+++ + I + +L+ + Sbjct: 704 FADLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNVQFAEIEKIAYEREKKLLKE 763 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 764 VELFDVYEGKNLEAGKKSYAVSFLLQDESQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|23099585|ref|NP_693051.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacillus iheyensis HTE831] gi|30316226|sp|Q8EPH5|SYFB_OCEIH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|22777815|dbj|BAC14086.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacillus iheyensis HTE831] Length = 811 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 242/834 (29%), Positives = 415/834 (49%), Gaps = 53/834 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + +WLK++++ D V+ E++ +T G+EVE V+ E + V + E++PD Sbjct: 1 MLVSYNWLKNYVNLDAVTPEELAAKITKSGIEVEGVEYIAEKNENIVVGYVETCEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++ G+ + +Q+VCGAPN+ G A PG+ +P NM + K+RG+ES GM Sbjct: 61 DKLNVTQVSVGE-ETLQIVCGAPNIAKGQKVAVAKPGAVLP-GNMKIKKVKLRGVESNGM 118 Query: 118 MCSEKELML------SDDSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 +CS +EL L +D + I P D VG ++ ++L L+D ++D+ + NR D + Sbjct: 119 ICSLQELGLEEKYIPTDIAEGIFVFPEDEDIEVGSKVDEWLNLTDAVLDLDVLANRPDAL 178 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 + G+A ++ A ++ + E + +I+ +++ L +A VK V Sbjct: 179 SMLGVAYEVAAVLDQPIELPTKNIDYIDEKVSDQIEINIESKDLNPYYAAFMVKDVVIKP 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WMR L A G+R I+ +VDITNYV L+ G P H FD R S+ + +RR GE I Sbjct: 239 SPLWMRNYLMASGIRPINNIVDITNYVLLEYGQPLHAFDFDRFASNQIVIRRGVEGEVIQ 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+ DN+VI + ++AG++GG ++ D T +VL+E A ++ + + + Sbjct: 299 TLDEQERKLTEDNLVITNGSEPVALAGVMGGANSEVTDKTVNVLLEAAYFEATAVRHTVR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI--TYKPRKIVF 406 G+ ++S RFE+G+D ++ L+ GG N T +++ Sbjct: 359 QTGLRSESSTRFEKGIDPNRIVEAGLRACQLMQRYAGGKVLQGFAEENHLDTKSTKEVKV 418 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++V + G+++ +D +L RL F + F V VP+ R+D+ D++EEI+RI Sbjct: 419 PLTQVNQRLGMELTEKDVQSVLNRLKFDFDQDGHTFIVHVPTRRRDITIFEDMLEEIIRI 478 Query: 467 YGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +G D + P + Q K L+ +Q R ++ + S ME + +S +++ Sbjct: 479 HGYDHL---PYTIPQGWVKSGGLTDKQLLQRKIREFMMSSGAMETLTYSLTNEQNVKRLV 535 Query: 526 GGQRELE------ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 +LE + P+S D +R S++P LL+ N+ R D FE+ V+ ++ Sbjct: 536 TPNIDLENSYPISLAMPMSEDHKYLRLSIVPELLRILQHNIARKQTDLNYFEIGKVFISE 595 Query: 580 TPE-----GQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFV 633 E +K AG G LW + ++ + VD F K +IE Sbjct: 596 EQELTHQPTEKLHLAGAFTG---------LWHNHPWQQDKKQVDFFVVKG----IIEGLF 642 Query: 634 SLDSLR--FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L F+ HPGR + E + G+ G+ HP + F L FE+ L Sbjct: 643 NYLQLNISFKQVKMKDMHPGRCAELNIDGENI-GFMGQLHPKTANVFDLPETYV-FEIDL 700 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 +S+ +K + V RD+AFI+D + +G + I+ + L+ +V++F Sbjct: 701 ESV---FEKYINVPSFTDIPRYPSVSRDIAFILDTEVFSGEVQQYIQEIGAPLVKEVSIF 757 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV+QG+ L +GKKSVA +++ Q T +DD++ +IVE V KK + +RS Sbjct: 758 DVYQGEHLEDGKKSVAYRLMYQDPAKTLQDDEVESSYQQIVEAVNKKFGSYVRS 811 >gi|195977935|ref|YP_002123179.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974640|gb|ACG62166.1| henylalanyl-tRNA synthetase beta chain PheT [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 801 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 237/825 (28%), Positives = 419/825 (50%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK +D DVS ++ + +++ G+EVE + + E LS + ++S + P+ Sbjct: 1 MLVSYKWLKKLVDIDVSPAELAEKMSTTGIEVEGITSPSEGLSKLVVGHIVSCDAVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++TG + Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVNTGDDELRQIVCGAPNVKAGINVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDAIIPKDFSEGIQILPETATAGDSIFPYLDLDDNIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +++S+ + I DS +A ++ V Sbjct: 180 VAHE-VAAIYGKSVSFPEKPLIESAKAAADSLEVAI-----DSDKVLTYASRIIEHVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD +D L R A GE++ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDTFADHKLLARDAREGERL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L+ D++VI + ++AGI+GGK ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERVLTTDDIVITVADQPVALAGIMGGKATEITTSSKTVVLEAAVFNGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+G++ ++ L +++ L GGT + A ++ P ++ Sbjct: 354 SRLNLRSESSSRFEKGINHDTLVEALDFAAAMLEELAGGTVLAGRLQAGSLPTNPVEVSS 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G + D I RLGF + G + F VSVP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTALSFTDIEGIFARLGFGISGTAEHFTVSVPRRRWDITIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D+ LP T E L+ Q+ R ++ + + E+++++ + E+++ Sbjct: 474 YGYDR-----LPTTLPEAAGTAAELTKTQAFRRQLRGLAEGLGLTEIISYALTTPEKALE 528 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 F +L E++ P+S + S +R S++ G+L NV R + A++E+ V+E E Sbjct: 529 FAMKPSQLTELMWPMSVERSVLRQSMVSGMLDTLAYNVARQQHNLAVYEIGKVFEQ---E 585 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 G A +G + + + + VD + AK + + +S+D + + Sbjct: 586 GNPKEALPTELNHFAFAITGLVADKDFQTQAQAVDFYHAKGILECLFDKLGLSVDYIPTK 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QK 699 A HPGR+ I+ + V+G+ G+ HP + + E Y+ + ++ + Sbjct: 646 EMAS--MHPGRTARIQLGDQ-VIGFVGQVHPQAAKAYHIP------ETYVAELDLTAIEA 696 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSL 758 V ++ + RD+A +VD +++ I + + + +V +FD++ G ++ Sbjct: 697 ALPADHAFVEITKYPAMVRDIALLVDASTSHQAILSAITSAKVKRLTEVKLFDIYAGATI 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q D D+++ M++I + +V++ A +R Sbjct: 757 AAGKKSMAYSLTFQNPTDNLTDEEVAGYMEKITKALVEEVGAEVR 801 >gi|81428986|ref|YP_395986.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus sakei subsp. sakei 23K] gi|91208119|sp|Q38VV4|SYFB_LACSS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78610628|emb|CAI55679.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus sakei subsp. sakei 23K] Length = 806 Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 228/823 (27%), Positives = 411/823 (49%), Gaps = 37/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK + +WLKD+LD + E + + +T G+EV V A L + VLS E +PD D Sbjct: 1 MKVSYNWLKDYLDLTTAPEALAEKITRTGIEVADVAQMSAGLKKIVVGHVLSCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + Q+VCGAPNV G + A P S I +N+ + K+RG+ S GM+ Sbjct: 61 HLHVCEVDVGEEEPFQIVCGAPNVAAGQYVIVALPNSRIA-DNVKIKKGKMRGVVSMGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C +E+ +D I P G + + L ++D IID+ LT NR+D +G+ Sbjct: 120 CGLQEIGFADSVVPKEYVDGIFVFPEAIAPGTDVYEALGMTDYIIDLDLTANRADALGIH 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A ++ A +++ S ++ + D L + + ++ V +P Sbjct: 180 GVAHEVAAIESLTPHFEDVAVSESDVQTKNQLSAQVADEQLAPTYHLRMLQNVTVQPSPL 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS---DVLTVRRACSGEKILA 289 W++ RL G+R I+ LVD+TNY+ L G P H FDA ++ + VR A +GEK+ Sbjct: 240 WLQTRLWNAGIRPINNLVDVTNYMMLTYGQPLHAFDADTLTGDHKQIEVRLAKTGEKLTT 299 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E+DL+ +++VI + ++AG++GG ++ NT +V++E A++ P + ++ + Sbjct: 300 LDEAEHDLTNEDIVITDGNQPIALAGVMGGFNSEITANTKNVIIEAAIFAPTAVRKTAQR 359 Query: 350 LGIITDSRYRFERGVDLQGM-IPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 + +D+ RFE+GV++ + + + + G + + N+ +P+ I F + Sbjct: 360 HNLRSDASSRFEKGVNVADVQVALDAAAAMMAELGAGQVTAGVVSPTNLAPQPKVIQFDS 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + V R+ G D+ ++ + +LERLGF V D+ V++P+ R D+E +AD++EEI R+YG Sbjct: 420 ARVNRVLGTDMSVQTMINLLERLGFEVANNADQLTVTIPARRWDIEIQADVIEEIARLYG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GG 527 D + S LP + L+ +Q R + L + + ++++ ++E++ F Sbjct: 480 YDNLPST-LPTGDMTTGA-LTTEQKALRRTRHTLEGAGLTQAISYALTTEEKAGQFTLAA 537 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPE 582 ++ +L+ P++ D + +R +L+ GLL NV R D A++E V+ + P Sbjct: 538 KQTATVLDWPMTQDHAYLRMNLVTGLLDDAAYNVARKQTDLALYEQGRVFLQHADQARPN 597 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 +Y+ AG+ G+ ++ W +E VD + K +++ + ++ +++ Sbjct: 598 EVEYV-AGLMSGNRQVKS----W----QEAAAPVDFYTIKGIVDTLMASYNLQAAVAYQA 648 Query: 643 G-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 A HPGR+ I E +G G+ HP I L FE+ L I Q++ Sbjct: 649 TDAYPEMHPGRTAAIYV-GETFVGIVGQIHPKIAKATHLKETYI-FELDLAKILELQRQT 706 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 K V RD+A V + I LVN IK R + V++FDV+ G + Sbjct: 707 IIAKPAPKFPE---VTRDIALQVPEAITNADLVNAIKEKGGRYLVSVSLFDVYAGSHIEA 763 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+A + T ++++ +++V ++V A +R Sbjct: 764 GEKSMAYTLTYLNEDATLTEEEVNAAFEKVVAHLVATFQAKVR 806 >gi|224542081|ref|ZP_03682620.1| hypothetical protein CATMIT_01255 [Catenibacterium mitsuokai DSM 15897] gi|224525014|gb|EEF94119.1| hypothetical protein CATMIT_01255 [Catenibacterium mitsuokai DSM 15897] Length = 795 Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 242/804 (30%), Positives = 398/804 (49%), Gaps = 50/804 (6%) Query: 20 KICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCG 78 ++ + +T IGLEVE + + V +P+ D I +++T + Q+VCG Sbjct: 21 ELAEKITRIGLEVEGQGPLAKGTKLVVGYVKECIEHPNSDHLHICQVETAPGEVRQIVCG 80 Query: 79 APNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML------SDDSAS 132 APNV G + A PG C E I + IRG +S GM+CS EL L +D A Sbjct: 81 APNVAAGEKVIVALPG-CELEGGKISS-GAIRGEKSDGMICSIAELGLDSRLLKEEDKAG 138 Query: 133 IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGK---LKEI 189 I LP DAPVG YL L D I+D+ LTPNR+DC+ ++ +A + AA LG+ L EI Sbjct: 139 IHVLPEDAPVGTEALTYLGLDDYILDIGLTPNRADCMAMQSLAYE-AAAVLGRKVTLPEI 197 Query: 190 NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISAL 249 P I + + ++ LC F VKGV +P WM+ L A G++ I+ + Sbjct: 198 K-KYPEEKSEIEVHV-----ETPLCSFFGAKLVKGVTTKESPKWMQNALLASGIKPINNI 251 Query: 250 VDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 VDI+N+V ++ G P H++D ++ V + +K + LD EY++ P++V++++D Sbjct: 252 VDISNFVMVETGQPIHMYDYDKLVKKAFVIKTGFNQKAVLLDENEYEILPEDVIVSTDDG 311 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG-VDLQG 368 I +AG++GG D+NT ++++E A +D + + + + ++TD+ + +G +D Sbjct: 312 IGCVAGVMGGNDTKIDENTKNIVIEAATFDGAALRNTARRMNLLTDASQHYIKGAIDTMS 371 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 + VL L++ + + + + S V L G + +++ I Sbjct: 372 SLKVLDRCTDLLVQFADAETIYETVHTPLDETRKTVTIELSRVNGLLGTSLTVKEVSDIF 431 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 + L F E + F V+VP++R D+ ADLVEE+ RIYG D + + LP+ + D L Sbjct: 432 DSLCFEYTLEDELFTVTVPTYRNDITMDADLVEEVARIYGYDNLPT-TLPVMNMTDGV-L 489 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILNPISADMSNM 544 + +QS+ + ++ L + E + ++ S E +V LF +++++P+ + S Sbjct: 490 TPKQSKEQLIRHTLVDLGLHETLTYTLTS-EATVNEFNLFHSLDNTVKLMSPLGEERSAA 548 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL 604 R SL+ LL+ N + D IFE+++ Y + +G + Sbjct: 549 RKSLIGSLLQTIHYNNAHSNKDVNIFEIANTYSDKEVSNLAIAVSG--------DYVNVP 600 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFE--SGAPSWYHPGRSGIIKTSAE 661 W K E VD + K ++ + +S FE +HPGRSG IK E Sbjct: 601 WMGKKEA----VDFYLVKGFVETLFKKLCIEESRYTFEKVEADNKDFHPGRSGYIKMGKE 656 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDL 720 IV G G+ HP + +++ E+ L +I + + K K + L+P V RD+ Sbjct: 657 IV-GVIGQVHPAKAKAYEVNDTYVA-ELNLTAILALRTRALKFKAI----PLYPAVSRDI 710 Query: 721 AFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A +VD +PA +V IK + L+ VFDV++G+ + EGKKS+AI +L Q T Sbjct: 711 ALVVDSKVPAADVVKTIKRASKQLVKSAEVFDVYEGEHMEEGKKSLAISLLFQDPSRTLD 770 Query: 780 DDDIRILMDRIVENVVKKTNAVLR 803 D I M++I+E K NAVLR Sbjct: 771 DATINSAMEKILEACKKDHNAVLR 794 >gi|169350597|ref|ZP_02867535.1| hypothetical protein CLOSPI_01368 [Clostridium spiroforme DSM 1552] gi|169292651|gb|EDS74784.1| hypothetical protein CLOSPI_01368 [Clostridium spiroforme DSM 1552] Length = 796 Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 234/808 (28%), Positives = 410/808 (50%), Gaps = 53/808 (6%) Query: 19 EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVC 77 +++ D +TSIGLEVE + N + TI VL +PD D + +++ + Q+VC Sbjct: 20 KELADKITSIGLEVEGMHNLANGNNMTIGHVLECVPHPDSDHLNVCKVEVKPGEIRQIVC 79 Query: 78 GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS------DDSA 131 GAPNV + A PG C N I+ KIRG+ES GM+CS EL L +D Sbjct: 80 GAPNVAANQKVIVANPG-CDLGNGFIIKESKIRGVESNGMICSIAELGLDQRLLKPEDKE 138 Query: 132 SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINI 191 I L +APVG +Y+ L D I+++ LTPNR+DC+ + A ++ G + + ++ Sbjct: 139 GIHILDDNAPVGEDPLEYIGLKDTILEIGLTPNRADCMALTSFAYEV-----GAILKRDV 193 Query: 192 SCP-LSSESI---PLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + P + ++ I + +K D D LC F VKGV +P W++ L A G++ I+ Sbjct: 194 NLPKIETKGIDGSEINVKVDTD---LCSFFGAKLVKGVTTKDSPEWLKNALLASGIKPIN 250 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD 307 +VDI+N+V L+ G P H++D +++ V + K + LD +EY + P+++++++D Sbjct: 251 NIVDISNFVMLETGQPIHMYDYDKLNKKEFVIKTGFNRKEILLDGEEYTIEPNDIIVSTD 310 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG-VDL 366 I IAG++G D+NTT++++EVA +D N+ + + L ++TD+ + +G ++ Sbjct: 311 DGIGCIAGVMGSNSTKIDENTTNIVIEVATFDGANLRETARRLNLLTDASQHYIKGALNT 370 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR 426 + +L+ +L+ L + ++ + R + S+V L G ++ + Sbjct: 371 ANSLNILERCANLLEELADAKEIYKSVTTDLNIEERYVEVSTSKVNGLLGTNISTLEIEE 430 Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR 486 I L F ++F V VP++R D+ ADL+EE+ RIYG D+I S ++ KR Sbjct: 431 IFNSLKFEFTLNGEQFNVKVPTYRNDITMTADLIEEVARIYGYDKIPSTLPEMSMTVGKR 490 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFGGGQRELEILNPISADMSN 543 N Q++ ++ +L + + E + +S S E +F + +++ P+ + S Sbjct: 491 NDV--QAKKHVIRNLLKDQGLHETLTYSLTSPTLVEDFNIFHTNET-IKLAMPLGEERSV 547 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGR 603 R S++ LL+ N I D +FE+S Y DT E Q A E +G Sbjct: 548 TRKSIISSLLQVINYNQSHNIKDVNVFELSTTYSKDT-ELQNLAIACCG------EYNGL 600 Query: 604 LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE----SGAPSWYHPGRSGIIKTS 659 + S + D + K ++ + ++ R++ YHPGRS I Sbjct: 601 AFKQISYK----ADYYLMKGFVETIFKNL-GIEESRYKLVRVDQNDINYHPGRSAYIMIG 655 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV--VHLSSLHPVK 717 EIV G G HP + + + +VY+ + ++ KT KV V + V Sbjct: 656 KEIV-GVIGNIHPLMEKKYNVK------DVYVVELNLTTLLSLKTSKVKFVDIPVYPSVS 708 Query: 718 RDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD+A ++D+ + + II+ +L+ + +FDV++G+ +G KKSVAI ++ Q K Sbjct: 709 RDIALVMDKDVATYDVCRKIIQASKQLVKETKIFDVYEGEHIGANKKSVAINLIFQDSKG 768 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +++ I +M++I+E+V K+ +AVLR+ Sbjct: 769 TLQENTINAVMEKILESVSKEFDAVLRA 796 >gi|145636221|ref|ZP_01791891.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittHH] gi|145270743|gb|EDK10676.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittHH] Length = 653 Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 210/643 (32%), Positives = 350/643 (54%), Gaps = 32/643 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V++ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVESVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA ++ Sbjct: 120 CSFSELGIDVEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIAREI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 G + + ++ P ES+P +++ DL C + + +K V +P W Sbjct: 180 -----GVVNKQLVNQP-HFESVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A GE+++ LD Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLELGQPMHAFDAAKVTQPVQVRFAKEGEELVLLDGS 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L + ++IA ++AGI GG +G + T DV++E A + P+ IA + G+ Sbjct: 294 TAKLQSNTLLIADQNGPLAMAGIFGGAESGVNSETKDVILESAFFAPLAIAGRARQYGLH 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEV 411 TD+ +RFERGVD + ++ +L+L +CGG +IC A + T+ P+ + S++ Sbjct: 354 TDASHRFERGVDFELARKAMERATALLLEICGGEVGEICEASSETHLPKVNTVQLRRSKL 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L G + I RLGF V D + V+ SWR D+E + DL+EE+ RIYG + Sbjct: 414 DALLGHHIETGSVTEIFHRLGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNS 473 Query: 472 I-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I + PL ++ + + L +R +K L E + +SF+ + L Q Sbjct: 474 IPNNAPLAHLRMREHKESDLDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPHQEA 530 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKY 586 L + NPIS +MS MR SL+ GLL A N +R + +FE + D Q++ Sbjct: 531 LVLPNPISVEMSAMRVSLMSGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEF 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 + + + G++ E W+ K+E VD FD K D S++ Sbjct: 591 VLSAVITGTAKSEH----WAGKAES----VDFFDLKGDLESIL 625 >gi|300214534|gb|ADJ78950.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus salivarius CECT 5713] Length = 805 Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 240/826 (29%), Positives = 423/826 (51%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL D++ D +++E++ + + +EV++ E L + K L V ++PD Sbjct: 1 MKVSTKWLNDYVKVDDLAVEELAEKIERTAVEVDETYRLEEGLKKIVVGKTLEVVKHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ++CGAPN+ + A G+ I N+ + K+RG S GM Sbjct: 61 DHLNICQVDVGEDEPIQIICGAPNIAANQKVIVALSGARIA-GNVKIKRGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +E+ S+ + I LP A G + +YL + + IIDV +TPNR D + + Sbjct: 120 ICALQEIGFSESVVPKEYADGIYVLPESAVPGEPVYNYLGMDEDIIDVDVTPNRGDMLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 RG+A D VAA G+ E+ + +E L I+ L D L + + + V Sbjct: 180 RGVARD-VAAVYGR--ELTLPMETVNEDDELHIEDYLTVKADKELAPAYKLRVIDNVTVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TNY+ +D G P H FD ++I S L VR A GEKI Sbjct: 237 PSPMWLQKRLWNAGVRPINNVVDVTNYILMDYGQPLHAFDYNKINSKELVVRLAKQGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE +L ++VI + ++AG++GG + DDNTT V++E A++D +I ++ Sbjct: 297 TTLDDQERELQSGDIVITNGKDPIALAGVMGGANTEVDDNTTTVVLESAMFDSSSIRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVF 406 + + +++ RFERG++ + L + +LI L G A+ I ++I + + Sbjct: 357 RRENLHSEASMRFERGINRGTIEEALDYAANLIAELGDGKVATGIAQEQDIDVQDITVEI 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ + G D+ + D I ERLGF V +F V+VP +R D+ ADL+EE+ RI Sbjct: 417 SLEKINNVLGTDLSVADVTDIFERLGFKVAENAGEFVVNVPPFRWDISIPADLIEEVARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KEQSVLF 524 YG D I + LP+ + + +Q R + +L + + + +++ + K + F Sbjct: 477 YGYDNIPA-TLPVGPTT-PGHYTYEQQVIRNTRAILEASGLTQAISYGLTTKVKAERFAF 534 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + E+ P+S+D + +R +L+ GLL N R + + A++E V+ +++ Sbjct: 535 EPAMKSTELDFPMSSDHTTVRMNLISGLLDDVSYNKARKVENVALYEQGRVFFRDEDSER 594 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +++AA + + IE + W DK R VD + K ++++ + + Sbjct: 595 PREVEHVAAAM---TGLIEDA--TWHDKK----RPVDFYVIKGIVQNLLDKVGVGSRVVY 645 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + A HPGR+ I E + G+ GE HP + + L + FE+ L + Sbjct: 646 TATAEHEEMHPGRTANIYIDGEFI-GFVGEVHPTLAKEYNLDR-VYVFELDLQKV----M 699 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + +K +V S P +KRD+A +V + I ++ IK N + V +FDV+ G+ Sbjct: 700 ELSKDPEVYEPVSKFPAIKRDIALLVAEDIQNSDIIKTIKENGGANLASVNIFDVYAGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G KS+A + + + T DD++ D++V + + AV+R Sbjct: 760 IDLGFKSLAYTLTFENKERTLTDDEVNKAFDKVVNKLQENYKAVIR 805 >gi|298481067|ref|ZP_06999261.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. D22] gi|298272641|gb|EFI14208.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. D22] Length = 820 Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 244/837 (29%), Positives = 426/837 (50%), Gaps = 51/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGRQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D G+I LK ++ L GGT +S+I +++ P + Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLATLMVKELAGGTISSEI---KDVFTTPAQDFI 417 Query: 407 MN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 ++ +V L G +P+E I+ L + E + ++VP +R DV+ D++E+ Sbjct: 418 VDLAYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILRIYG + ++ +P T + + ++ ++ ++A + E++N S Sbjct: 478 ILRIYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT-- 531 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ + G + +LNP+SAD++ MR +LL G L++ N +R AD FE Sbjct: 532 -RAAYYDGLEAYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFG 590 Query: 574 HVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + Y D +K +A G+ +G+ S+ +++ KA ++++ Sbjct: 591 NCYYFNADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKR 650 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L +L + + S + T L FG +L F + N EVY Sbjct: 651 LGLDLHNLVVGNLTDDVFAAALS--VNTKGGKRLASFGIVTKKLLKAFDIDN-----EVY 703 Query: 691 LDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 + + K ++ K+ + +S VKRDLA ++D++I + I + +L+ + Sbjct: 704 YADLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNIQFAEIEKIAYETEKKLLKE 763 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 764 VELFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|313891656|ref|ZP_07825263.1| phenylalanine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] gi|313119934|gb|EFR43119.1| phenylalanine--tRNA ligase, beta subunit [Dialister microaerophilus UPII 345-E] Length = 823 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 238/834 (28%), Positives = 415/834 (49%), Gaps = 54/834 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WL +D ++ E + +TLT G+ VE V + +S K+L +E++PD Sbjct: 1 MNVSLKWLATLVDIQGINAEDMAETLTVDGIPVEHVVYPAKGISNVKTSKILEIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP------------ENNMIVN 105 + + ++D G+ IQ+V GA NV+VG + A G+ +P + ++ + Sbjct: 61 NKLVVCQLDIGEKDTIQIVTGASNVKVGQIVPVALHGAHLPAKHDASKPGGLAKGDIKIK 120 Query: 106 VRKIRGIESTGMMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG++S GMMCS EL L +S IM LP P+G + +L D I ++ Sbjct: 121 KSKLRGVQSDGMMCSVGELGLDSNLFVGVESEGIMILPESTPIGIDFTTLYDLDDVIYEM 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 LT NR+DC + G+A ++ A K+ IS E+I +++ C F + Sbjct: 181 ELTANRADCFSMMGMAREVGAIFKRKVNLPEISIEEKGETIKGRADLVIENPEYCSRFGL 240 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 ++ V+ +P W+ RL++ G+R I+ +VD NYV L+ G P H +D +IS LT Sbjct: 241 RLIENVKIGRSPEWIENRLRSNGIRPINNVVDAANYVMLEMGQPLHTYDYDKISGHSLTC 300 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A E I+ LD +E L P ++VIA + IAG++GG + + T ++L+E A++ Sbjct: 301 RHAKKDEVIITLDEKERKLLPTDLVIADEKGPVCIAGVMGGLDSEVTNKTKNILLESAVF 360 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNI 397 D +I R+ + LG+ +++ R+E+GV+ + + L ++L T A DI + Sbjct: 361 DSASIRRTSRRLGLRSEASGRYEKGVNPEASLDALNRFCQILLEQNACTVARDILDLYPV 420 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE-K 456 + + ++ E+ + G+++P E + IL RL F+V + +K +V VP +R D+E Sbjct: 421 PKEKQTVITTVEEINKYIGMNIPKETIIDILTRLSFTVEEKENKLKVEVPLFRLDIESGM 480 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL EE+ R+YG +I + P + + R ++ + V+ L M E + +SF+ Sbjct: 481 PDLAEEVARVYGYSKIPN-TTPWSAIVKGRMTKEMETLIK-VQNSLIENGMTETLTYSFM 538 Query: 517 SKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 K L +++ + I+NPIS + MRT+LLPGL + N+ + + AIFE Sbjct: 539 HKNALKLLNYTEKDFVNKAIPIINPISEEYPVMRTTLLPGLFRTLKYNLSQKNNNLAIFE 598 Query: 572 VSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 VY + PE + M +G+ G++ EG + D +D KA Sbjct: 599 TGKVYYPKELPLKELPE-EVVMISGLLCGNTENEGYPN--------EVKKYDFYDIKAIV 649 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +V+ + + + + HPG S +K VL FGE HPN+LD + + Sbjct: 650 ENVLSN-IGIKNYEIRRSSHPTLHPGISAEFVKDGC--VLAIFGEIHPNVLDVLNIKEKV 706 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRL 743 GF + L ++ ++ K+ + V+RDLA V + NII K + Sbjct: 707 FGFIMELKNLDKYADEKIIYSKIAKYPA---VERDLAITVPVSKSNNYVENIICKAAGKY 763 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ + +FD++QG+ + G KS+A + + T D+++ +++I+E + K+ Sbjct: 764 LESLKLFDLYQGEQIKSGYKSMAYSLKFRLKDRTLTDEEVNQWINKIIEELSKE 817 >gi|281411548|ref|YP_003345627.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] gi|281372651|gb|ADA66213.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotoga naphthophila RKU-10] Length = 788 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 243/820 (29%), Positives = 409/820 (49%), Gaps = 62/820 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT----IVKVLSVER-- 54 M+ SWL++ +D D +E+I + LT G VE + L PF I+ +ER Sbjct: 1 MRVPESWLREFVDLDWDIEQIAERLTFSGTSVEDI-----LRPFNVSGEIITARVIERFD 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P + I+ R+DTGK VV V G + A G+ + N + R+ +G+ Sbjct: 56 HPASEKLIVCRVDTGKRI-YTVVTADKTVNEGDYVILALEGATL-NNGFKIEPREFKGVI 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S + P +G + + L++ ++D+ +TPNR DC+ + G Sbjct: 114 SEGMLCSLEELGLEEKSDRVYRFPEPVELGVNVVEKYGLNERVLDIEITPNRPDCLSIIG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A +L A LK+ E + ++K ++D C ++ +KGV +P W Sbjct: 174 VARELSALSGRPLKKPQPIVSFVDEDVQFDVK--IEDVEGCPRYSARIMKGVTVKDSPLW 231 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL A G+RS++ +VD TNYV ++ G+P H FD +R+ + + V+ A GE++L LD Sbjct: 232 MKARLVAAGVRSLNNVVDATNYVMIELGHPVHAFDLNRLKNKRIVVKSAKGGERVLLLDE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY+L V+I + ++ GI+GG +G D+T D+++EVA +DP+ I ++ K LGI Sbjct: 292 KEYELKGGEVLITDGENVLALGGIMGGMESGVYDDTRDLVLEVAYFDPVRIRKAAKALGI 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI---CIARNITYKPRKIVFMNS 409 ++S YRFERGVD + V + LI L GG R I +P+K++ + Sbjct: 352 DSESSYRFERGVDPNDVELVSLRLAELIQKLAGGYVLRKFWDVYPRKI--EPKKVMLRKA 409 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++++ G V E IL RL F V D +EV VP++R DVE + DL+EEI RIYG Sbjct: 410 RIEKILGTKV--EKPGDILRRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIYGY 467 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++++S+ + + + R S +Q R + + + EVV +SF+ + + R Sbjct: 468 EKVESKVISVPAI--NRGWSEKQLFRREISQFMKGMGFDEVVTFSFVDSLKVKKWPLVDR 525 Query: 530 E-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 E + + NPI++DM MRTS L++ N R D +FE+ +Y + G Sbjct: 526 EPIALSNPIASDMDVMRTSQFYSLIQVLAENFKRQNRDLKLFEIGKIYFKEN--GNFREI 583 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + S G+E G ++DK R V + K LD L F G Y Sbjct: 584 ETLSAMSCGLENPGD-YTDK-----RSVSFYTIKG----------VLDELFFRLGVNVVY 627 Query: 649 H--------PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 P RS I + G+ G P +LD + + FE+ ++ + K Sbjct: 628 RAVEIPGLFPTRSARIYVENREI-GFIGMVDPKLLDEYDVKEDTYFFEIDMELLRKYASK 686 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 R + + V+RD++F++ + + ++ + K L+++V VFD+++GK + Sbjct: 687 RPAYRPTPRFPA---VRRDISFLLPKGFESVKIIELFKKSGGDLVEEVGVFDIYEGKGIP 743 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 E SV V+ + + T D+++ ++I E +V+K Sbjct: 744 ENMVSVTFYVVFRHSERTLTDEEV----NKIFEEMVQKAE 779 >gi|237714555|ref|ZP_04545036.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. D1] gi|262406421|ref|ZP_06082970.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_22] gi|294643299|ref|ZP_06721125.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides ovatus SD CC 2a] gi|294806493|ref|ZP_06765334.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides xylanisolvens SD CC 1b] gi|229445324|gb|EEO51115.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. D1] gi|262355124|gb|EEZ04215.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_22] gi|292641422|gb|EFF59614.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides ovatus SD CC 2a] gi|294446356|gb|EFG14982.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides xylanisolvens SD CC 1b] Length = 820 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 244/837 (29%), Positives = 426/837 (50%), Gaps = 51/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ ++ LTSIGLE VE+V + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCTEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G + +Q+VCGAPNV G V A G+ + + + ++K IRG+E Sbjct: 61 NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 STGM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ + P E+ L I+ +++S C +A VKGV Sbjct: 181 GVARDLYAYLIQNGRQATLQRPSVDGFKVENHDLNIEVKVENSEACPHYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I + + V+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLNERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D G+I LK ++ L GGT +S+I +++ P + Sbjct: 361 RRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEI---KDVFTTPAQDFI 417 Query: 407 MN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 ++ +V L G +P+E I+ L + E + ++VP +R DV+ D++E+ Sbjct: 418 VDLAYEKVHSLVGKVIPVETIKSIVTSLEMKITNETAEGLTLAVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILRIYG + ++ +P T + + ++ ++ ++A + E++N S Sbjct: 478 ILRIYGYNNVE---IP-TTLNSSLTTKGEHDKSNKLQNLIAEQLVGCGFNEILNNSLT-- 531 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ + G + +LNP+SAD++ MR +LL G L++ N +R AD FE Sbjct: 532 -RAAYYDGLEAYPSNHLVMLLNPLSADLNAMRQTLLFGGLESIAHNANRKNADLKFFEFG 590 Query: 574 HVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + Y D +K +A G+ +G+ S+ +++ KA ++++ Sbjct: 591 NCYYFNADKKNEEKVLAPYSEDYHLGLWVTGKKVSNSWAHADENSSVYELKAYVENILKR 650 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L +L + + S + T L FG +L F + N EVY Sbjct: 651 LGLDLHNLVVGNLTDDVFAAALS--VNTKGGKRLASFGIVTKKLLKAFDIDN-----EVY 703 Query: 691 LDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 + + K ++ K+ + +S VKRDLA ++D++I + I + +L+ + Sbjct: 704 YADLNWKELMKAIRSVKISYKEISKFPAVKRDLALLLDKNIQFAEIEKIAYETEKKLLKE 763 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 764 VELFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|257869451|ref|ZP_05649104.1| phenylalanyl-tRNA synthetase [Enterococcus gallinarum EG2] gi|257803615|gb|EEV32437.1| phenylalanyl-tRNA synthetase [Enterococcus gallinarum EG2] Length = 806 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 230/807 (28%), Positives = 414/807 (51%), Gaps = 29/807 (3%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + WL D+LD +++S ++ D ++ G+EVE ++ A L + +V +PD Sbjct: 1 MLVSYKWLNDYLDLSEISPNELADKMSVTGIEVEGIEMPAAGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPN++ G+ + A PGS I N+ + K+RG +S GM Sbjct: 61 DHLSICQVDIGESELSQIVCGAPNIKSGIKVIVALPGSRIA-GNVKIKKGKMRGQQSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD + I LP DA VG + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQELGYSDSVIPKEYAEGIYYLPTDAEVGKEVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A K I S+ +IK +++ + + ++ V +P Sbjct: 180 RGVAYEVGAIYRQTPKFETIQLNESAVKAADKIKVSVENQKDAPAYQIRIIENVTIAPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ RL G+R I+ +VDITNY+ L G P H FD ++ S + VRR E ++ L Sbjct: 240 QWLQNRLMNEGIRPINNVVDITNYILLLFGQPLHAFDYQKLGSQEIVVRRGKPQETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + L N+VI + ++AG++GG + +TT V +E AL+DP+ I + K Sbjct: 300 DGETRTLDDKNIVITNGKEPVALAGVMGGLDSEITQDTTTVALEAALFDPLAIRLTSKKF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+G++ + ++I L GGT + +T K ++ Sbjct: 360 NLRSESSSRFEKGINQAAIAEACDAAAAMIAELAGGTVLQGAVKGAEVTPKDVQVTITLD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + R G + I ++ I + LGF ++V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINRYLGTQITIAEANEIFDALGFGYQENEGTYQVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D++ S LP + +L+ +Q TR V+ +L + E ++++ ++E++ F + Sbjct: 480 DRLPS-TLPSGETV-AGSLTKEQRLTRKVRTLLEGNGVSEAISYALTTEEKARQFCWLES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 ++ L+ P++ + +R +LL GLL N+ R A+ A++EV V+ + + ++ Sbjct: 538 QVTRLDWPMTEERGVLRMNLLSGLLDDIAYNLARKNANVALYEVGRVFYKTSDDPRELPT 597 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSW 647 G+ +G + +E + VD + K ++ D + +E + A Sbjct: 598 ---ENNHLGLAITGAITEKDWQEAEQKVDFYHIKGILENLFASLSLTDQITYEKTTAIKE 654 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HPGR+ I E V+GY G+ HP+ + L+ E Y+ + + + T+ + Sbjct: 655 LHPGRAAAILLQDE-VIGYLGQVHPSTAKAYDLT------ETYVAELDLDRLIATENAAL 707 Query: 708 VH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKS 764 ++ +S V RD+A +VD+ T++ I+ R + D+ +FDV+QGK++ KKS Sbjct: 708 IYQAVSKFPSVNRDIALLVDEKTSNQTILQTIEQAAGRFLTDIHLFDVYQGKNIDSNKKS 767 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIV 791 +A ++ + T D++I M +I Sbjct: 768 MAYRLTFANPEATLTDEEINQAMSKIT 794 >gi|153941054|ref|YP_001392407.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum F str. Langeland] gi|152936950|gb|ABS42448.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum F str. Langeland] gi|295320396|gb|ADG00774.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum F str. 230613] Length = 793 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 245/834 (29%), Positives = 422/834 (50%), Gaps = 73/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPIKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVVGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SESI +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSESIKDSLKVEVKDA-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEGEKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTNISKEEMQEFLDRLDLNTEIKGEILEIHVPTFRCDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFIS-------- 517 I P+T + +++++Q + V L + + + +++SF+S Sbjct: 477 I-----PITTI---KSVTMQAGKNEKQHLDDKVIETLMASGLNQSISYSFVSPKVFEKIN 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 KE S L ++ ++I NP+ D S MRT+ +P +++A RN R ++FE+ +Y Sbjct: 529 LKEDSNL----RKVVKIKNPLGEDFSIMRTTTIPSMVEALSRNYSRNNDYASLFEIGKIY 584 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + + G L+ + VD F+ K ++++ Sbjct: 585 IPKEDPTELPDEKNILTLG-------------LYGN--------VDYFNLKGIVENILDG 623 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L+ + P+ +HPGR+ I + V G GE HP++ D + + E+ Sbjct: 624 LGIDNYKLKRQEENPT-FHPGRTAEIYIKKDYV-GILGEIHPDVQDNYDIEERCYVAELN 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + K K+ L V RD+A IVD + + NIIKN +++ + + Sbjct: 682 LD---VLYKHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHL 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 739 FDVYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|332798673|ref|YP_004460172.1| Phenylalanyl-tRNA synthetase beta chain [Tepidanaerobacter sp. Re1] gi|332696408|gb|AEE90865.1| Phenylalanyl-tRNA synthetase beta chain [Tepidanaerobacter sp. Re1] Length = 798 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 246/833 (29%), Positives = 410/833 (49%), Gaps = 66/833 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M +SWLKD +D + E++ LT G VE ++ + I ++ +V+++PD D Sbjct: 1 MLVPISWLKDFVDINEKPEELSKRLTMSGSNVEGIEYWGTDIKNIVIGEIQTVQKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I+ ++TG+ + IQ+V GA N++ G A GS I I K+RGIES GM+ Sbjct: 61 KLVIVYVNTGE-ETIQIVTGATNIKAGDKVPVALHGSTITGGKKI-RTSKLRGIESAGML 118 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L D I+ LP DAPVG + DYL L D +ID +TPNR DC+ + Sbjct: 119 CSAEELGLDDHGLPKEMQNGILILPEDAPVGKDIKDYLNLEDVVIDFEITPNRPDCLSIV 178 Query: 173 GIALDLVAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + A + EIN+ + + + + +++ LC + VK + + Sbjct: 179 GVARETAATFKSNFRIPEINLKEE-AEDCVKDNVNINIEAEDLCNRYVARLVKDIVIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P WM++RL+ G+RSI+ +VDITNYV L+ G P H FD ++ + VRR + EKI Sbjct: 238 PLWMQRRLQTCGVRSINNIVDITNYVMLEMGQPLHAFDYDKVEGHSIIVRRGKTSEKIET 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +++ ++I + IAG++GG + +T VL+E A + NI R+ K Sbjct: 298 LDGNIREINESMLLITDGKKPLGIAGVMGGADSEITSSTKCVLIESANFFGPNIRRTSKQ 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIV 405 LG+ ++S RFE+G+D + LI L G D+ + P++I Sbjct: 358 LGLRSESSMRFEKGIDPNICLQAADRACELIEQLGAGKVLKGYIDVFPGKT---APKEIP 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 F ++ + G D+P + + IL RL +V D +V VP++R D+ E+AD++EEI R Sbjct: 415 FNPDKINSVLGTDIPTNEMVDILNRLEITVNSTADGMKVIVPTFRSDLVEEADIIEEIGR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG D++ LP V + LS Q +K VL E+ +SFIS + Sbjct: 475 MYGYDRLPI-TLPTGNVTHGK-LSDHQKYINEIKDVLVYNGYSEIYTYSFISPKVFDNIN 532 Query: 526 GGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 Q + + +LNP+ + S MRT+L+P +L N++ + + FE+ Y Sbjct: 533 APQNSSLRQAITLLNPLGEEHSIMRTTLMPNILDVISFNLNHKVDELRFFEIGAAYLPKE 592 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-- 632 + P K +A G+ S +D +D K VIE Sbjct: 593 LPLKELPYENKRIAIGLCDDS--------------------MDFYDLK----RVIETLFK 628 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + + F +H R I + V+G+ GE +P++L+ + +S + E+ L Sbjct: 629 KLRIKNYNFLQEQHFAFHTSRCAKIVLGND-VIGFAGEINPDVLENYEISKRVYIAELDL 687 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVF 750 D I + + + L RDLA +V++ + G ++N IK + L++ V +F Sbjct: 688 DIILSNASGKVGFEP---LPKFPTSDRDLAIVVNEKVLVGDVINTIKESAGNLLERVELF 744 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++QG + +G KS+A ++ + T D ++ ++++I +++ K NA LR Sbjct: 745 DIYQGGQIAKGYKSIAFSLVFRAEDRTLTDTEVNEIIEKITKHLQDKFNATLR 797 >gi|27467750|ref|NP_764387.1| Phe-tRNA synthetase beta chain [Staphylococcus epidermidis ATCC 12228] gi|30316204|sp|Q8CSY8|SYFB_STAES RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|27315294|gb|AAO04429.1|AE016746_219 Phe-tRNA synthetase beta chain [Staphylococcus epidermidis ATCC 12228] Length = 800 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 237/821 (28%), Positives = 418/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +P+ D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKKLVVGHVLSKTPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + + L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKNYESGIYVFPEAVKPGTDALEAIYLNDQVMEFDLTPNRADALSMV 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVAALYQTKMNKPQLTSNESQESAKDELTIEVKNEDKVPYYSTRVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVTEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ GT D ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLERYASGTVLKDRVSHGDLGSFVTPIEITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G ++ E+ + I E+LGF + + V+VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 VNRTIGFNLTDEEIIDIFEQLGFDTENKNGEITVNVPSRRKDISIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR- 529 +I S LP+ + L+ +Q +TR VK L + + + +S +SK + F R Sbjct: 480 EIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLDQAITYSLVSKNHATDFALQNRP 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + P+ + Sbjct: 539 TIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGELPDEVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE--SG 643 Y+ +GI G + W K E VD + K V+E +L+F+ +G Sbjct: 599 YL-SGILTG----DFVNNTWQGKKES----VDFYLTKG----VVERIAEKLNLQFDFRAG 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 646 QIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + + V RD+A V+ + + L++II +N + +++D VFDV++G+ L +GK Sbjct: 704 YEPIPRFPG---VTRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 761 KSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|322807440|emb|CBZ05014.1| phenylalanyl-tRNA synthetase beta chain [Clostridium botulinum H04402 065] Length = 793 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 245/834 (29%), Positives = 422/834 (50%), Gaps = 73/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPIKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SESI +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSESIKDSLKVEVKDA-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEGEKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTNISKEEMQEFLDRLDLNTEIKGEILEIHVPTFRCDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFIS-------- 517 I P+T + +++++Q + V L + + + +++SF+S Sbjct: 477 I-----PITTI---KSVTMQAGKNEKQHLDDKVIETLMASGLNQSISYSFVSPKVFEKIN 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 KE S L ++ ++I NP+ D S MRT+ +P +++A RN R ++FE+ +Y Sbjct: 529 LKEDSNL----RKVVKIKNPLGEDFSIMRTTTIPSMVEALSRNYSRNNDYASLFEIGKIY 584 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + + G L+ + VD F+ K ++++ Sbjct: 585 IPKEDPTELPDEKNILTLG-------------LYGN--------VDYFNLKGIVENILDE 623 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L+ + P+ +HPGR+ I + V G GE HP++ D + + E+ Sbjct: 624 LGIDNYKLKRQEENPT-FHPGRTAEIYIKRDYV-GILGEIHPDVQDNYDIEERCYVAELN 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + K K+ L V RD+A IVD + + NIIKN +++ + + Sbjct: 682 LD---VLYKHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHL 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 739 FDVYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|261418280|ref|YP_003251962.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus sp. Y412MC61] gi|319767760|ref|YP_004133261.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus sp. Y412MC52] gi|261374737|gb|ACX77480.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. Y412MC61] gi|317112626|gb|ADU95118.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. Y412MC52] Length = 804 Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 242/823 (29%), Positives = 430/823 (52%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WL +++D T ++ +++ + +T G+EVE+V+ + ++ I VL E +P+ Sbjct: 1 MLVSYRWLGEYVDLTGITAKELAERITKSGIEVERVEALDRGMNGVVIGHVLECEPHPNA 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D LR +D G+ + ++++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DK--LRKCLVDLGEGEPVRIICGAPNVAKGQKVAVAKVGAVLP-GNFKIKRAKLRGEESN 117 Query: 116 GMMCSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL + + + I P DAPVG ++L L D +++++LTPNR+DC+ Sbjct: 118 GMICSLQELGVETKVVPKEYADGIFVFPSDAPVGADALEWLGLHDEVLELALTPNRADCL 177 Query: 170 GVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + G+A + VAA LG+ +K + +SE + I ++ +A VK VR Sbjct: 178 SMIGVAYE-VAAILGRDVKLPEAAVKENSEHVHEYISVRVEAPEDNPLYAGRIVKNVRIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I Sbjct: 237 PSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAGETI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ E L+ +++VI + ++AG++GG ++ D+TT V +E A + I ++ Sbjct: 297 ITLDDVERKLTENHLVITNGREPVALAGVMGGANSEVRDDTTTVFIEAAYFTSPIIRQAV 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 K+ G+ +++ RFE+G+D L +L+ GG + ++ + +V + Sbjct: 357 KDHGLRSEASTRFEKGIDPARTKEALDRAAALMSEYAGGEVVGGIVEASVWRQDPVVVTV 416 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 E + + G + E+ IL L F + F + VPS R+D+ + D++EE R+ Sbjct: 417 TLERINGVLGTAMTKEEVAAILSNLQFPFTEDNGTFTIHVPSRRRDIAIEEDIIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D++ + LP+ + + L+ Q++ R V+R L + + + +S S +++ F Sbjct: 477 YGYDRLPAT-LPVAEAKPG-GLTPHQAKRRRVRRYLEGTGLFQAITYSLTSPDKATRFAL 534 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A N R + D A++E+ VY E+ P Sbjct: 535 ETAEPIRLALPMSEERSVLRQSLIPHLLEAASYNRARQVEDVALYEIGSVYLSKGEHVQP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +K AG+ G LW + + VD + AK + + + ++ Sbjct: 595 -AEKERLAGVLTGL----WHAHLWQGEK----KAVDFYVAKGILDGLFDLLGLAARIEYK 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ I V+G+ G+ HP + + L FE+ L + ++ + Sbjct: 646 PAKRADLHPGRTADIVLDGR-VIGFVGQLHPAVQKEYDLKETYV-FELALTDLLNAESEA 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 + + + S V RD+A +VD+++ AG L I+ + L+ DV++FDV++G L + Sbjct: 704 IRYEPIPRFPS---VVRDIALVVDENVEAGALKQAIEEAGKPLVKDVSLFDVYKGDRLPD 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ + +R++ V K+ AVLR Sbjct: 761 GKKSLAFSLRYYDPERTLTDEEVAAVHERVLAAVEKQFGAVLR 803 >gi|15643585|ref|NP_228631.1| phenylalanyl-tRNA synthetase subunit beta [Thermotoga maritima MSB8] gi|12230006|sp|Q9WZS9|SYFB_THEMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|4981353|gb|AAD35904.1|AE001749_7 phenylalanyl-tRNA synthetase, beta subunit [Thermotoga maritima MSB8] Length = 788 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 240/819 (29%), Positives = 413/819 (50%), Gaps = 60/819 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT----IVKVLSVER-- 54 M+ SWL++ +D D +E+I + LT G VE + L PF I+ +ER Sbjct: 1 MRVPESWLREFVDLDWDIEQIAERLTFSGTSVEDI-----LRPFNVSGEIITARVIERFD 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P + I+ ++DTGK V+ V G + A G+ + N + + R+ +G+ Sbjct: 56 HPASEKLIVCKVDTGKRI-YTVITADKTVNEGDYVILALEGATL-NNGLKIEPREFKGVI 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S + P +G + + L++ ++D+ +TPNR DC+ + G Sbjct: 114 SEGMLCSLEELGLEEKSDRVYRFPDPVELGVNVVEEYGLNERVLDIEITPNRPDCLSIIG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A +L A L + E + ++ +++D C ++ +KGV +P W Sbjct: 174 VARELSALSGRPLNKPQPDVSFVDEDVQFDV--EIEDVEGCPRYSARIMKGVTVKDSPLW 231 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ RL A G+RS++ +VD TNYV ++ G+P H FD +R+ + + V+ A GE++L LD Sbjct: 232 MKARLVAAGVRSLNNVVDATNYVMIELGHPVHAFDLNRLKNKRIVVKSAKGGERVLLLDE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY+L V+I + ++ GI+GG +G D+T D+++EVA +DP+ I ++ K LGI Sbjct: 292 KEYELKGGEVLITDGENVLALGGIMGGMESGVYDDTRDLVLEVAYFDPVRIRKAAKALGI 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI---CIARNITYKPRKIVFMNS 409 ++S YRFERGVD + V + LI L GG R I +P+K++ + Sbjct: 352 SSESSYRFERGVDPNDVELVSLRLAELIQKLAGGYVLRKFWDVYPRKI--EPKKVMLRKA 409 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++++ G V E+ IL RL F V D +EV VP++R DVE + DL+EEI RIYG Sbjct: 410 RIEKILGTKV--EEPGDILRRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIYGY 467 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++++S+ + + V R +Q R + + + EVV +SF+ ++ + R Sbjct: 468 EKVESKVISVPAV--NRGWGEKQLFRREISQFMKGMGFDEVVTFSFVDSQKVKKWPLVDR 525 Query: 530 E-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 E + + NPI++DM MRTS L++ N R D +FE+ +Y + G Sbjct: 526 EPIALSNPIASDMDVMRTSQFYSLIQVLAENFKRQNRDLKLFEIGKIYFKEN--GNFREI 583 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + S G+E G ++DK R V + K LD L F G Y Sbjct: 584 ETLSAMSCGLENPGD-YTDK-----RSVSFYTIKG----------VLDELFFRLGVNVVY 627 Query: 649 HPGR-SGIIKT-SAEIV-----LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 G+ T SA I +G+ G P +LD + + FE+ ++ + KR Sbjct: 628 RAAEIPGLFPTRSARIYVENREIGFIGMVDPKLLDEYDVKEDTYFFEIDMELLRKYASKR 687 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + + V+RD++F++ + + ++ + K L+++V VFD+++GK + E Sbjct: 688 PAYRPTPRFPA---VRRDISFLLPKGFESVKIIELFKKSGGDLVEEVGVFDIYEGKGIPE 744 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 SV + V+ + + T D+++ ++I E +V+K Sbjct: 745 NMVSVTLYVVFRHPERTLTDEEV----NKIFEEMVQKAE 779 >gi|255013426|ref|ZP_05285552.1| phenylalanyl-tRNA synthetase subunit beta [Bacteroides sp. 2_1_7] Length = 820 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 257/845 (30%), Positives = 414/845 (48%), Gaps = 67/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++LD D+ E++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYLDFDLEPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGEAPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP DA VG DY + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPADAVVGTLAKDYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K + P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPAELRRPSVDAFKIDDETPGVEVV--VENTEACPRYSGVTIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL+ +GLR I+ +VDITN++ + G P H FDAS+I + + V+ A +G Sbjct: 239 VKESPEWLQNRLRVIGLRPINNVVDITNFILHELGQPLHSFDASKIKGNKVIVKAAEAGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + I G+ GG +G + TTDV +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIGGVFGGLDSGVTEETTDVFLESACFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG----GTASDICIARNITYKP 401 + + G+ TD+ +RFERG+D + VLK LI L G G D+ A +P Sbjct: 359 TARRFGLNTDASFRFERGLDPNNTMYVLKRAALLIQELAGGKITGAVQDVYPA---VAEP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + ++ L G D+P+E IL L +I E + + VP +R DV+ D++ Sbjct: 416 YTVEVTYEKINTLIGKDIPVETVKSILASLEMEIISETAEGLTLHVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R + L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSWKLQNLISEQLCGCGFNEIMNNS 529 Query: 515 FISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + E ++NP+SAD++ MR +LL G L++ N+ R + Sbjct: 530 LT---RSAYYTDLSVYPEAHCVMLMNPLSADLNCMRQTLLFGGLESIEHNMKRKNGNVRF 586 Query: 570 FEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKA 623 +E + Y+ D + + +A GI +G W+ E+ +++ KA Sbjct: 587 YEFGNCYDYNIDNKKEDETLAQFSEDYRLGIWVAGNRVENNWAHPDEKSS----VYELKA 642 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V + + F + Y G S I T + LG G + + Sbjct: 643 YVENILARLGVDMKRVIFGNLTNDIYSSGLS--ITTGSGRQLGTMGIVSKKLRKMLDID- 699 Query: 683 PICGFEVYLDSIPISQ-KKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 EVY + +Q K K KV +S VKRDLA ++D+ + + I K+ Sbjct: 700 ----MEVYYAELSWTQLMKEIKKAKVTFSEISKFPAVKRDLALLLDKSVQFSEVEKIAKD 755 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 DR L+ +V++FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K Sbjct: 756 SDRKLLKEVSLFDVYEGKNLPAGKKSYAVSFFMQDESKTLNDKQIDAIMKKIQTNLEQKL 815 Query: 799 NAVLR 803 A LR Sbjct: 816 GAQLR 820 >gi|293572576|ref|ZP_06683550.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] gi|291607359|gb|EFF36707.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium E980] Length = 806 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 229/822 (27%), Positives = 423/822 (51%), Gaps = 35/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGITVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFSYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A + SS+ IK ++D + + + ++GV +P Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSQLASDRIKVTVEDKEVVPAYQIRIIEGVNIQPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R I+ +VD+TNY+ L G P H FD ++ S+ + VR A E ++ L Sbjct: 240 QWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSNEILVRHAKENETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R+ K Sbjct: 300 DGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRRTAKQF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 360 NLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINQYLGTSLVVKEVNEIFEALGFSYEEKDHVYSVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F + Sbjct: 480 DQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVIKES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END + + Sbjct: 538 NITRLDCPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP---RTH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I+ + I G +W +K + + + VD F K ++ E + + +++ Sbjct: 595 LPQEIKHAAIAISG---IWEEKDWQTKAQNVDFFTIKGLLENLFEQLGIHEDIHYQTVTE 651 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 652 IKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAAQ 704 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K++V ++ V RD+A +V + + L +I + R + D+ +FDV+QG+++ +G Sbjct: 705 KEIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIHSAAGRFLTDIQLFDVYQGENIEKG 764 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T D++I MD++ + + + A +R Sbjct: 765 HKSMAYSLTFVNPEATLTDEEINKAMDKVTKALTETLGASIR 806 >gi|319948178|ref|ZP_08022338.1| phenylalanyl-tRNA synthetase subunit beta [Dietzia cinnamea P4] gi|319438162|gb|EFV93122.1| phenylalanyl-tRNA synthetase subunit beta [Dietzia cinnamea P4] Length = 829 Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 261/838 (31%), Positives = 405/838 (48%), Gaps = 82/838 (9%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNR--EALSPFTIVKVLSVE 53 M+ SWL + L V+ ++ +GLEVE + E P TI +V S+E Sbjct: 1 MRIAQSWLTEILQRANDGWTVTPAELDAGFVRVGLEVEGEPEQLPEISGPLTIGRVASIE 60 Query: 54 -----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D G + Q+VCGA N G L V A PG+ +P + RK Sbjct: 61 ELEGFKKPIRFCLV---DVGGDEPQQIVCGARNFAEGDLVVVALPGTVLP-GGFEIGKRK 116 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMEL------PIDAPVGGRLSDYLELSDPIIDVSLT 162 G S GM+CS EL + D + I+ L P D P G L+ D +I++++T Sbjct: 117 TYGRPSEGMICSASELGIGSDHSGIIVLAPGTAEPGD-PAGPVLAAGAGERDTVIELNVT 175 Query: 163 PNRSDCIGVRGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 P+R C+ RG+A +L A G + + P E+ PLE+ L +S + FA+ Sbjct: 176 PDRGYCLSARGLAREL-ACGFDLDFADPAVELGLPADGEAWPLEV---LPESG-ARRFAL 230 Query: 220 CCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V GV P WM +RL G+R IS VD+TNYV L+ G+P H FDA+R+ LTV Sbjct: 231 RRVTGVDPAARTPWWMARRLLLSGVRPISPAVDVTNYVMLELGHPMHAFDAARLQGGLTV 290 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 RRA +GE ++ LD+ E L P++VVI D S+AG++GG D TTDVL+E A+W Sbjct: 291 RRARAGETLVTLDDVERTLDPEDVVICDDSGPVSMAGVMGGASTEVSDQTTDVLLEAAVW 350 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNI 397 D + + R+ + + +++ R+ERGVD I L +L+ + GGT + + + Sbjct: 351 DTLAVFRTIRRHKLPSEAGKRYERGVDAAASIAALDRAATLLAEITGGTVEASLTDVGSA 410 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEK 456 P I F R++G+ P + R LE++G +V G+ EV+ P+WR D+ Sbjct: 411 PVMP-TIAFDPDRPARVAGVGYPAGTARRRLEQIGCTVAGDDAVLLEVTPPTWRPDLTLP 469 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ +Q R V LA+ +EV+ F Sbjct: 470 ADLVEEVLRLEGLENIPSV---LPTAPAGRGLTAEQRGRRAVGHALAAAGHVEVLTSPFC 526 Query: 517 SKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 G G + + ++NP+ +D +++ T+LLP L++ RN+ R D A+F Sbjct: 527 DPSVFDDMGLGDDDERRSTMSVVNPLESDKAHLATTLLPSLVEIARRNITRGTRDLALFS 586 Query: 572 VSHVY---------------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF- 615 V+ V T E ++ ++A + + + L++ K E F Sbjct: 587 VAQVSFRTPTTAPVEMLPVDREPTAEERERLSASLPEQPLHVAA---LYTGKREPAGHFG 643 Query: 616 ----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 D DA A V + +R AP +HPGR + +V+G+ GE H Sbjct: 644 PGREADALDAVEAARIVGRALGAEVGVRAAEYAP--WHPGRC-VEVLVDSVVVGHAGELH 700 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P + G+ C E+ L +I + T +SS V +D+A +VD +PA Sbjct: 701 PAACERLGVPARTCAVELDLTAIGAREVLPAPT-----ISSYPAVNQDVALVVDASVPAA 755 Query: 732 TLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + + ++ L++ V +FDV+ G LG+G+KS+A + TFR DD + D Sbjct: 756 DVESALRAGGGDLLESVRLFDVYTGTQLGDGRKSLAYAL-------TFRADDRTLTED 806 >gi|15615672|ref|NP_243976.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus halodurans C-125] gi|12585228|sp|Q9K896|SYFB_BACHD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|10175732|dbj|BAB06829.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus halodurans C-125] Length = 808 Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 237/831 (28%), Positives = 416/831 (50%), Gaps = 52/831 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M + WLK ++D D +S E++ + LT G+EV+ + D + + + VL ++P+ Sbjct: 1 MLVSYQWLKQYVDLDGISAEEVAEKLTRGGIEVDIIHDLNQGATGVVVGHVLECRQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +++ G+ + +Q+VCGAPNV G A G+ +P N + K+RG S GM Sbjct: 61 DKLNLCQVEIGEEEPVQIVCGAPNVAAGQKVAVAKVGAVLP-GNFKIKKAKLRGELSQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + + + I D +G + L D ++++ LTPNRSDC+ + Sbjct: 120 ICSLQELGVENKFVQKEFADGIYVFSDDVEIGSDALEALNRYDQVLELDLTPNRSDCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSES-----IPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A ++ A L + + P + S + +++D + +K V+ Sbjct: 180 YGVAYEVAA-----LFDKEVHWPTAESSGTDGQASDYVSVEIEDIEKNPYYGATIIKNVK 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL A G+R IS +VD+TNYV L+ G P H FD R+ S+ + R A GE Sbjct: 235 VGPSPLWLQNRLIAAGIRPISNVVDVTNYVLLEYGQPLHAFDYDRLGSNKVVTRLAKEGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K++ LD+ E L D+++I + +IAG++GG + ++TT VL+E A +DP + + Sbjct: 295 KMVTLDDVERTLQADHLLITNGRDPVAIAGVMGGATSEVQEDTTTVLLEAAYFDPATVRK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + ++LG+ +DS RFE+GVD + + +LI + GGT + +V Sbjct: 355 ASRDLGLRSDSSSRFEKGVDPKRVREAAARAATLIAEVAGGTVVGGVVEAGELAIEEPVV 414 Query: 406 FMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +N + + G+++ ++ I +RLGF+ E D FEV+ PS R D+ + DL EE+ Sbjct: 415 SLNLPHMNQRLGMELSHDEVAAIFDRLGFAYTVENDTFEVTAPSRRGDIRIEEDLFEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG D I + P+ + L+ Q + R ++R L + EV+ +S S+E+ Sbjct: 475 RLYGYDNIPT-TFPVGGT-TRGGLTDYQQKRRKIRRYLEGAGLFEVMTYSLTSEEKEKGL 532 Query: 525 GGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--END 579 G + + + P+S + S MRTSL+P LL N++R I+E+ V+ + + Sbjct: 533 QGENEDYLPIRVAMPMSEERSTMRTSLVPHLLDVVQYNLNRKQEALFIYELGSVFLSKEE 592 Query: 580 T----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 T PE ++ M AG G + LW + + VD F K + Sbjct: 593 TLTKQPE-EREMLAGALTGF----WTEHLWQGEK----KAVDFFVVKGILEGMFAELGLS 643 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + + FE G HPGR+ +K + V G+ G+ HP L E Y+ + Sbjct: 644 EKVTFERGEQPGMHPGRTANVKVNGRAV-GFAGQIHPERQSELDLK------ETYVFQLD 696 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDV 752 + + +V + L + RD+A +VD+++ A L +I+ N + V +FD+ Sbjct: 697 VESLLTEEGTEVAYEPLPRFPAISRDIALVVDENVTAAQLQQVIEANGGEWLKHVYLFDL 756 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++G+ + GKKS+A + + T D+++ + ++I++ + T AVLR Sbjct: 757 YEGEHMEAGKKSIAFSLTYFDPERTLTDEEVTAVHEQILKELEASTGAVLR 807 >gi|77406396|ref|ZP_00783456.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] gi|77174987|gb|EAO77796.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae H36B] Length = 777 Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 232/801 (28%), Positives = 415/801 (51%), Gaps = 46/801 (5%) Query: 25 LTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVR 83 +++ G+EVE V+ E LS + ++S E PD + ++DTG + QVVCGAPNV+ Sbjct: 1 MSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTHLHLCQVDTGDDELRQVVCGAPNVK 60 Query: 84 VGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD------SASIMELP 137 G+ + A PG+ I +N I KIRG+ES GM+CS +EL LS+ S I LP Sbjct: 61 TGINVIVAVPGARIADNYKIKK-GKIRGMESLGMICSLQELGLSESIIPKEFSDGIQILP 119 Query: 138 IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGK---LKEINI--S 192 A G + YL+L D II++S+TPNR+D + +RG+A + VAA GK +E N+ Sbjct: 120 EGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRGVAHE-VAAIYGKKVHFEEKNLIEE 178 Query: 193 CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDI 252 +++ I + I +S ++ VK V +P W++ +L G+R I+ +VD+ Sbjct: 179 AERAADKISVVI-----ESDKVLSYSARIVKNVTVAPSPQWLQNKLMNAGIRPINNVVDV 233 Query: 253 TNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ 311 TNYV L G P H FD + + R A +GEK++ LD +E DL D++VIA + + Sbjct: 234 TNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKLITLDGEERDLIADDLVIAVNDQPV 293 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 ++AG++GG+ ++ V++E A+++ +I ++ L + ++S RFE+G++ + Sbjct: 294 ALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTSGRLNLRSESSSRFEKGINYDTVSE 353 Query: 372 VLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILER 430 + +++ L GG + + +P ++ V G ++ D + E+ Sbjct: 354 AMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVSTTLGYVNTRLGTELTYTDIEEVFEK 413 Query: 431 LGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSL 490 LGF++ G KF V VP R D+ +ADLVEEI RIYG +++ + LP S+ Sbjct: 414 LGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARIYGYEKLPT-TLPEAGATAGELTSM 472 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLL 549 Q+ R R V+ V + E++ ++ + E++V F + E++ P++ D S +R +++ Sbjct: 473 QRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFSTQATNITELMWPMTVDRSALRQNVV 531 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS 609 G+L NV R ++ A++E+ V+E T ++ + + + + +G + Sbjct: 532 SGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKEDLPTEVETFTFAL--TGLVEEKDF 588 Query: 610 EERCRFVDLFDAKADALSVIEPF---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 + + + VD F AK ++E + LD + HPGR+ I + + G+ Sbjct: 589 QTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQKGLASMHPGRTATILLDGKEI-GF 643 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIV 724 G+ HP + + E Y+ I +S + + ++ ++ V RD+A ++ Sbjct: 644 VGQVHPQTAKQYDIP------ETYVAEINLSTIESQMNQALIFEDITKYPSVSRDIALLL 697 Query: 725 DQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + + +V+ I+ V RL + +FDV+ G ++ EG KS+A + Q D D++ Sbjct: 698 AESVSHHDIVSAIETSGVKRLT-AIKLFDVYAGNNIAEGYKSMAYSLTFQNPNDNLTDEE 756 Query: 783 IRILMDRIVENVVKKTNAVLR 803 + M++I +++V+K NA +R Sbjct: 757 VAKYMEKITKSLVEKVNAEIR 777 >gi|288925820|ref|ZP_06419751.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella buccae D17] gi|288337475|gb|EFC75830.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella buccae D17] Length = 822 Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 248/845 (29%), Positives = 421/845 (49%), Gaps = 65/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQETADALTSCGLEVDALEEVQTVKGGLKGLFVGKVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + E + K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGEQEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DAPVG ++Y L SD +I++ +T NRSD + Sbjct: 121 SFGMICAEDEIGVGTDHAGIIVLPEDAPVGQPAAEYYHLESDWVIEIDITANRSDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + S+P+++ ++++ CK +A + Sbjct: 181 GVARDLYAWLVQNGHTTSLHRPDCEAFKVDDHSLPIDV--EIENKEACKRYACVSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L+ +GLR I+ +VDITNYV + G P H FDA + + VR G Sbjct: 239 VKESPEWLQNKLRVIGLRPINNIVDITNYVMMAYGQPMHCFDADMVVGHKIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAGI GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLSICNAEAPMCIAGIFGGKGSGTYETTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKP--R 402 S + G+ TDS YRFERG+D + LK L L GG S DI +++ +P Sbjct: 359 SARRHGLSTDSSYRFERGIDPDNTVYALKQAAILCRQLAGGKVSMDI---KDVYPEPING 415 Query: 403 KIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 +V +N + V L G ++ E I+ L + E + + VP++R DV+ D+V Sbjct: 416 TLVELNYDYVYNLIGKEIGKETIKNIVTSLEMKIEEETETGLRLLVPAYRVDVQRPCDVV 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSF- 515 E+ILRIYG + ++ +P TQ++ ++ + R ++ ++ + E++N S Sbjct: 476 EDILRIYGYNNVE---IP-TQLKSSLTIAGDEDRKNKLQNLIGEQLVGCGFNEILNNSLS 531 Query: 516 -ISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + E ++++NP+SAD+ MR ++L G L++ RNV+R + FE Sbjct: 532 KLSYYTDLNLNAYTEEHTVKLMNPLSADLGVMRQTMLFGGLESIVRNVNRKSGNLRFFET 591 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSG------------IEGSGRLWSDKSEERCRFVDLFD 620 + Y D K+ A KG + IEGS W +E+ ++ Sbjct: 592 GNCYHYDK---DKWSAENPVKGYTQETHIALWVTGKRIEGS---WIHPTEDST----FYE 641 Query: 621 AKADALSVI-EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 KA ++ V + ++ + + + G S + T L G I F Sbjct: 642 LKAYVENIFRRAGVGVGAVVVQKSENNIFSKGLS--MMTRGGKALAELGVVDLKIKKAFD 699 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 LS + ++ D++ + KK +S V RDLA ++D + + + + Sbjct: 700 LSQDVYFADINFDNVMKAIKKNELV--FTEISKYPAVSRDLALLIDNGVEFAEIEQVARQ 757 Query: 740 VD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + +L+ V +FDV+QG++L EGKKS A+ ++Q T D I +M ++++N+ K Sbjct: 758 TEKKLLKKVELFDVYQGRNLPEGKKSYAVNFILQDDTKTLNDKAIDAIMQKLIKNLTAKL 817 Query: 799 NAVLR 803 A LR Sbjct: 818 GAELR 822 >gi|149183056|ref|ZP_01861509.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. SG-1] gi|148849237|gb|EDL63434.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. SG-1] Length = 804 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 240/826 (29%), Positives = 406/826 (49%), Gaps = 46/826 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL+D++D + ++ E + + +T G+EVE V+ + + VL E +PD Sbjct: 1 MFVSYKWLQDYVDLSGITPEDLAEKITRSGIEVEGVEVIGNGVKNVVVGHVLECEPHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C ++D G + +Q++CGAPNV G A G+ +P N + K+RG S Sbjct: 61 DKLNRC---QVDVGDEEPVQIICGAPNVAAGQKVPVAKVGAVLP-GNFKIKKAKLRGQAS 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + + I D VG + L L D I+++ LTPNR+D Sbjct: 117 HGMICSLQELGVEGKLVPKEHAEGIYVFANDTEVGSDAVEELNLDDAILELGLTPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A +K+ I +SE I +++ + + +K + Sbjct: 177 MSMLGVAYEVAAILDRDVKKPEIKVEETSEKASDYISVNVEATEDNPLYVAKVIKNINIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R S + VRRA GE I Sbjct: 237 PSPMWMQNRLIASGIRPHNNVVDITNYILLEYGQPLHAFDYDRFGSKEILVRRAKQGEVI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L+ +++VI + ++AG++GG ++ +T VL+E A + + + Sbjct: 297 VTLDEEERKLNENHLVITNGTEPVALAGVMGGANSEVGQDTKTVLLESAYFAGGTVRAAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYKPRKIVF 406 K+ G+ +++ R+E+GVD + + VSL+ GG + + N+ +P + Sbjct: 357 KDHGLRSEASSRYEKGVDPNRVKEAAERAVSLMAEFAGGEVLEGSVTVDNLKVEPAVVTI 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ + G D+ ED I RL F V ++F+V+VP+ R D+ + DL+EE+ R+ Sbjct: 417 TLEKINSVLGTDISAEDVESIFRRLQFQVSVSGNEFQVTVPTRRGDITIEEDLLEEVARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 YG D LPLT E +L+ Q + R +R L +M+ + +S + ++ Sbjct: 477 YGYDN-----LPLTLPEGDATAGSLTPFQIKRRATRRNLEGSGLMQAITYSLTNDAKAGQ 531 Query: 524 FGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 F +RE + ++ P+S + SN+R S++P LL+A N R A +EV V+ EN Sbjct: 532 FALHKREPIRLIMPMSEERSNLRLSIIPQLLEALSYNSARQNDSLAFYEVGSVFLKEENQ 591 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLW-SDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + AG G LW S + + VD F K + E + + Sbjct: 592 ELPSEHEHIAGALTG---------LWNSHPWQGEKKPVDFFVVKGILEGLFEELGVSEHI 642 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F HPGR+ I E V+G+ G+ HP + L N FE+ ++ PI Sbjct: 643 TFRQAEREGMHPGRTAEILLD-ETVIGFAGQVHPEVQKAMDL-NETYVFEI--EAAPIFN 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + + + RD+A +VDQ AG L IIK +L+ +V++FD+++G+ Sbjct: 699 YGLPALQYTA-IPRYPSITRDIALVVDQQAKAGELKTIIKEAGGKLLKEVSIFDLYEGEH 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + GKKS+A + + T DD++ ++++E V K A LR Sbjct: 758 MEPGKKSLAYSLKYFDPERTLTDDEVVKAHNKVLEAVKAKAGAELR 803 >gi|170287911|ref|YP_001738149.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] gi|170175414|gb|ACB08466.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotoga sp. RQ2] Length = 788 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 238/820 (29%), Positives = 410/820 (50%), Gaps = 62/820 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT----IVKVLSVER-- 54 M+ SWL++ +D D +E+I + LT G VE + L PF I+ +ER Sbjct: 1 MRVPESWLREFVDLDWDIEQIAERLTFSGTSVEDI-----LRPFNVSGEIITARVIERFD 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P + I+ ++DTGK V+ V G + A G+ + N + + R+ +G+ Sbjct: 56 HPASEKLIVCKVDTGKRI-YTVITADKTVNEGDYVILALEGATL-NNGLKIEPREFKGVI 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S + P +G + + L++ ++D+ +TPNR DC+ + G Sbjct: 114 SEGMLCSLEELGLEEKSDRVYRFPDPVELGVNVVEEYGLNERVLDIEITPNRPDCLSIIG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A +L A L + E + ++ +++D C ++ +KGV +P W Sbjct: 174 VARELSALSRRPLNKPQPDVSFVDEDVQFDV--EIEDVEGCPRYSARIMKGVTVKDSPLW 231 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 M+ RL A G+RS++ +VD TNYV ++ G+P H FD +R+ + ++ V+ A GE++L LD Sbjct: 232 MKARLVAAGVRSLNNVVDATNYVMIELGHPVHAFDLNRLKNKIIVVKSAKGGERVLLLDE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L ++I + ++ GI+GG +G D+T D+++EVA +DP+ I ++ K LGI Sbjct: 292 KEYKLKGGEILITDGENVLALGGIMGGMESGVYDDTRDLVLEVAYFDPVRIRKAAKALGI 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI---CIARNITYKPRKIVFMNS 409 ++S YRFERGVD + V + LI L GG R I +P+K++F + Sbjct: 352 SSESSYRFERGVDPNDVELVSLRLAELIQKLAGGYVLRKFWDVYPRKI--EPKKVMFRKA 409 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++++ G V E+ IL RL F V D +EV VP++R DVE + DL+EEI RIYG Sbjct: 410 RIEKILGTKV--EEPGDILRRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIYGY 467 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++++S+ + + V R +Q R + + + EVV +SF+ + + R Sbjct: 468 EKVESKVISVPAV--NRGWGEKQLFRREISQFMKGMGFDEVVTFSFVDSLKVKKWPLVDR 525 Query: 530 E-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 E + + NPI++DM MRTS L++ N R D +FE+ +Y + G Sbjct: 526 EPIALSNPIASDMDVMRTSQFYSLIQVLAENFKRQNRDLKLFEIGKIYFKEN--GNFREI 583 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + S G+E G ++DK R V + K LD L F G Y Sbjct: 584 ETLSAMSCGLENPGD-YTDK-----RSVSFYTIKG----------VLDELFFRLGVNVVY 627 Query: 649 H--------PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 P RS I + G+ G P +LD + + FE+ ++ + K Sbjct: 628 RAVEIPGLFPTRSARIYVENREI-GFIGMVDPKLLDEYDVKEDTYFFEIDMELLRKYASK 686 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 R + + V+RD++F++ + + ++ + K L++++ VFD+++GK + Sbjct: 687 RPAYRPTPRFPA---VRRDISFLLPKGFESVKIIELFKKSGGDLVEEMGVFDIYEGKGIP 743 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 E SV V+ + + T D+++ ++I E +V+K Sbjct: 744 ENMVSVTFYVVFRHSERTLTDEEV----NKIFEEMVQKAE 779 >gi|283783146|ref|YP_003373900.1| phenylalanyl-tRNA synthetase, beta subunit [Gardnerella vaginalis 409-05] gi|298253914|ref|ZP_06977501.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis 5-1] gi|283441645|gb|ADB14111.1| phenylalanyl-tRNA synthetase, beta subunit [Gardnerella vaginalis 409-05] gi|297532057|gb|EFH71032.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis 5-1] Length = 873 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 264/884 (29%), Positives = 417/884 (47%), Gaps = 121/884 (13%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + P + V+ P + Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVRVGLEEEEIHTSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G K+ ++ +VCGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDKYNDVDENGKKVPRGIVCGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI---------DAPVGGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L + G + + L L+ PI++++ Sbjct: 125 YGHISDGMCASERELGLGDSHNGIILLREYGFSKAEYDELKPGDDVMELLHLNKPILEIN 184 Query: 161 LTPNRSDCIGVRGIA-----------LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD 209 +TP+R RG+A D V+ ++ +IN +S+ I ++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAVYTDPVSKLNEQVSQINDEGHKTSD-----IDVSIE 239 Query: 210 DSSLCKGFAMC------CVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 D++ G C V G + A P WM++RL G+RSIS VDITNYV LD G Sbjct: 240 DTNPIHGVPGCDRYYARAVHGFDSTCASPRWMQRRLTRAGMRSISLAVDITNYVMLDLGQ 299 Query: 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGI 316 P H +D +I + VRRA GE + LD ++++L +++VI R+ +AG+ Sbjct: 300 PLHAYDLDKIEGPIVVRRAHEGEHLTTLDGKDHELHVEDLVICDSPRGNHGSRVLGLAGV 359 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 +GG + T ++L+E A +DP++IAR+ + I +++ RFERGVD Q + P + Sbjct: 360 MGGMYGEVTSETKNILIEAAHFDPVSIARTARRHKIPSEASRRFERGVDTQ-LQPAAAQM 418 Query: 377 VSLILSLCGGT--ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS 434 + +L GG ++ C N T IVF +EV+R++G+DV + IL +G S Sbjct: 419 AANLLEQFGGAKPSTSPCDVNN-TQSRNVIVFKANEVQRVAGLDVDLNRISDILTDIGCS 477 Query: 435 VIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 V G + F V P+WR D+ E DLVEEI R+ G D+I + +P V + L+ QQ Sbjct: 478 VAGGGNGSFSVLPPTWRPDLNEPCDLVEEIARLVGYDEIPVK-VPAVPVTGRTGLTAQQQ 536 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSL 548 R + LA +E +++ F+ +E F E + I NP++ D +R S+ Sbjct: 537 TRRAIAYELAETGFVESLSYPFVGEEDIKAFRQNVDEVAEVSVRIANPLAGDRPWLRRSV 596 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYENDT--------------------------PE 582 L L RN+ R + D +++E+ HVY +D PE Sbjct: 597 LMTLAGTVRRNLHRGLTDISMYELGHVYFSDPNAPAIPALPGSVRPSNAELAALDAGLPE 656 Query: 583 GQKYMAAGI--RKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 ++AA + +G G+ R WSD E R K ++E F + D Sbjct: 657 QPLHVAALLTGHAEETGWLGTHRDVDWSDAVEALQRVGKRIGVKF----ILEQFKAQD-- 710 Query: 639 RFESGAPSWYHPGRSGIIKTSAE----IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 APS +HPGRS + AE + LG GE HP++ + L FE LD Sbjct: 711 -----APSSWHPGRSAQVCVLAEDGSSVNLGVVGELHPHVCEALDLPKHSAAFE--LDLT 763 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVF 753 + + K + +S+ PVK+D AF + A L + I K+ L++ V +FDV+ Sbjct: 764 ELFKNMIMKPVQAKPISTFPPVKQDFAFTAPIELKANELQSAIEKSAGDLLESVELFDVY 823 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +G+ LGEG +S+A V TFR +D R L +E V KK Sbjct: 824 EGEQLGEGLRSLAYSV-------TFRAND-RTLSGEEMEEVRKK 859 >gi|291563706|emb|CBL42522.1| phenylalanyl-tRNA synthetase beta subunit [butyrate-producing bacterium SS3/4] Length = 804 Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 262/836 (31%), Positives = 420/836 (50%), Gaps = 65/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS----VERNP 56 MK SWLK+++D DV+ +++ D L G EVE++ + A +V V+ VE Sbjct: 1 MKVPFSWLKEYVDIDVTAQELEDKLFGCGFEVEELIDLSAEIDRVVVGVVKECTPVEGTH 60 Query: 57 DLDCAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C ++D G++ +IQ+V GAPNV G+ A S +P + + + +RGIES Sbjct: 61 LCTC---KVDCGEYGNDIQIVTGAPNVYAGMHTPAALDNSTLP-GGIRIKAKPMRGIESN 116 Query: 116 GMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL L++D +++L D G ++ + L D I D+S+T NR+DC Sbjct: 117 GMLCSGEELGLNEDLYPGSEVYGLLDLLKDTVPGTDIAKVVGLDDYIFDISVTANRADCQ 176 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIKFDLDDSSLCKGFAMCCVKGVRNN 228 V GIA ++ A LK + S L+IK + D LC + V+ + Sbjct: 177 SVLGIAREVAAVLDKPLKMPALDYKESDYKYENLDIKVEAQD--LCPRYLGHGVRNITPG 234 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WMR++L GLRSIS +VDITNYV L+ G P H FD S + S + VRRA +GE I Sbjct: 235 QSPRWMRRQLALCGLRSISNVVDITNYVMLEIGQPMHAFDMSTLESSQIIVRRAENGEMI 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD +E+ L+ +N+VI + ++AGI+GG ++ +NTT +L E A + NI ++ Sbjct: 295 QTLDGKEFKLNENNLVICDGSKPVALAGIMGGMNSEITENTTQLLFESAKFMRDNIRKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGG-TASDICIARNITYKPRKIV 405 ++LG TD+ +E+G+ + + + LI L CG TAS ++ + +K Sbjct: 355 RSLGQNTDASSHYEKGIAEYTVEIGMARALHLIEELGCGEITASAFDVSAGAPREGKKFT 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE-EKADLVEEIL 464 S + ++ GI+VP E+ L IL RL F V + D V+ P +R+D+E + DL EE++ Sbjct: 415 ATLSGINKILGIEVPAENVLDILRRLCFEVERDGDVLTVTAPRYREDIEVGEPDLAEEVI 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS------- 517 R YG + I L + V + L+ Q R +K+V+ S+ EV +F S Sbjct: 475 REYGYEHIVPTFLKDSAVTNG-GLNPAQKRRTKLKQVMVSQGYFEVSTLAFYSDADLDAL 533 Query: 518 ------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 KE++V + +LNPI+ ++S MRT+L P +L NV + FE Sbjct: 534 HIAEDAKERNV--------IRLLNPITTNLSIMRTTLAPSMLNTVVENVKKGNTAGRFFE 585 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 ++VY P+ A + + + I G ++ EE D F K + Sbjct: 586 YANVY---YPK-----ALPLTELPNEIPHVG--FAAFGEEE----DFFTVKGTMEELAAS 631 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFEV 689 F VS D R E + HPG S I E V G FG+ ++ L + ++ Sbjct: 632 FGVSFDYERAED--VPYLHPGISAYILCDGERV-GSFGKLANSVAGELKLPKDSKANNQI 688 Query: 690 YLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDV 747 YL I + + + + +S V RDLA +VD+ + G+L+N I+ + + D Sbjct: 689 YLGEIDFAALASHMPEGLRYKPISEYDTVTRDLAMVVDEDVSCGSLINEIRKACKQVGDA 748 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FD+++G+ LG+GKKS+A ++ P DI + +I+ N+ + A +R Sbjct: 749 ELFDIYRGEQLGKGKKSMAFKITFVPEDKALDPKDIERFVKKILGNLKFRLGADIR 804 >gi|297529134|ref|YP_003670409.1| phenylalanyl-tRNA synthetase subunit beta [Geobacillus sp. C56-T3] gi|297252386|gb|ADI25832.1| phenylalanyl-tRNA synthetase, beta subunit [Geobacillus sp. C56-T3] Length = 804 Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 242/823 (29%), Positives = 429/823 (52%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WL +++D T ++ +++ + +T G+EVE+V+ + ++ I VL E +P+ Sbjct: 1 MLVSYRWLGEYVDLTGITAKELAERITKSGIEVERVEALDRGMNGVVIGHVLECEPHPNA 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D LR +D G+ + +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DK--LRKCLVDLGEGEPVQIICGAPNVAKGQKVAVAKVGAVLP-GNFKIKRAKLRGEESN 117 Query: 116 GMMCSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS +EL + D + I P DAPVG ++L L D +++++LTPNR+DC+ Sbjct: 118 GMICSLQELGVETKVVPKDYADGIFVFPSDAPVGADAIEWLGLHDEVLELALTPNRADCL 177 Query: 170 GVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + GIA + VAA LG+ +K + ++E++ I ++ +A VK VR Sbjct: 178 SMIGIAYE-VAAILGREVKPPKAAVKETNENVHDYISVRVEAPEDNPLYAGRIVKNVRIG 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WM+ RL A G+R + +VDITNY+ L+ G P H FD R+ S + VRRA +GE I Sbjct: 237 PSPLWMQARLMAAGIRPHNNVVDITNYILLEYGQPLHAFDYDRLGSKEIVVRRAKAGETI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ E L+ +++VI + ++AG++GG ++ D+TT V +E A + I ++ Sbjct: 297 ITLDDVERKLTENHLVITNGCEPVALAGVMGGANSEVRDDTTTVFIEAAYFTSPVIRQAV 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 K+ G+ +++ RFE+G+D L +L+ GG + ++ + +V + Sbjct: 357 KDHGLRSEASTRFEKGIDPARTKEALDRAAALMSEYAGGEVVGGIVEASVWRQDPVVVTV 416 Query: 408 NSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 E + + G + E+ IL L F + F + VPS R+D+ + D++EE R+ Sbjct: 417 TLERINGVLGTAMTKEEVAAILSNLQFPFTEDNGTFTIHVPSRRRDIAIEEDIIEEAARL 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D++ + LP+ + + L+ Q++ R V+R L + + + +S S +++ F Sbjct: 477 YGYDRLPAT-LPVAEAKPG-GLTPHQAKRRRVRRYLEGAGLFQAITYSLTSPDKATRFAL 534 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 E + + P+S + S +R SL+P LL+A N R + + A++E+ VY E+ P Sbjct: 535 ETAEPIRLALPMSEERSVLRQSLIPHLLEAASYNRARQVENVALYEIGSVYLSKGEHVQP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +K AG+ G LW + + D + AK + + + + Sbjct: 595 -AEKERLAGVLTGL----WHAHLWQGEK----KAADFYVAKGVLDGLFDLLGLSKRIAYR 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ I V+G+ G+ HP + + L FE+ L + ++ + Sbjct: 646 PAKRADLHPGRTADIVLDGR-VIGFVGQLHPAVQKEYDLKETYV-FELALAELLNAESEA 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 + + + S V RD+A +VD+++ AG L I+ + L+ DV++FDV++G L + Sbjct: 704 IRYEPIPRFPS---VVRDIALVVDENVEAGALKQAIEEAGKPLVKDVSLFDVYKGDRLPD 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D+++ + +R++ V K+ AVLR Sbjct: 761 GKKSLAFSLRYYDPERTLTDEEVAAVHERVLAAVEKQFGAVLR 803 >gi|210629894|ref|ZP_03296158.1| hypothetical protein COLSTE_00041 [Collinsella stercoris DSM 13279] gi|210160765|gb|EEA91736.1| hypothetical protein COLSTE_00041 [Collinsella stercoris DSM 13279] Length = 824 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 253/847 (29%), Positives = 421/847 (49%), Gaps = 66/847 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WL ++ ++ G EVE ++ EA +VLS +PD D Sbjct: 1 MKVSYDWLSTMVELPEDPSELSREFIRTGTEVEAIETVGEAFDHVVTAQVLSKTAHPDSD 60 Query: 60 -CAILRIDTGKH--------QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + +D G + + +Q+VCGA N G V A G+ +P ++ + K+R Sbjct: 61 HLWVCSVDVGANNVDAEGNPEPLQIVCGAQNFNEGDHIVTAMVGAVLP-GDVKIKKGKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ S GM CS +EL LS D I LP DAPVG LS YL SD ++D +TPNR DC+ Sbjct: 120 GVVSMGMNCSARELGLSSDHEGIWILPQDAPVGMPLSQYLGSSDVVLDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPL------SSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 + GIA + +G + + + S L S S + +L D LC + V+ Sbjct: 180 MIGIARE-----VGAIYDRDFSVELPQVREESGASAEDTVSVELLDEGLCDRYVARVVRN 234 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVR 279 V+ +P+W+ QRL A G+R+ + +VDITNYV + G P H FD S + + VR Sbjct: 235 VKVGPSPDWLVQRLNACGVRTHNNVVDITNYVMMLTGQPLHAFDLSAFEERDGKRAVAVR 294 Query: 280 RACSGEKILALDNQEYDLSPDNVVIAS---DGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 A GE+ LD+ E LS +IA+ ++AG++GG + D T DVL+E A Sbjct: 295 AAHEGEQFRTLDDVERTLSAGMGLIATGEAGATPVALAGVMGGMDSEVTDATVDVLIESA 354 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 ++ + + ++L +I+D+ RFER VD G + V +LI L GG + C+ + Sbjct: 355 CFNAGRTSHTSRDLALISDASIRFERQVDETGCVDVANIACALIEDLAGGAVAPGCV--D 412 Query: 397 ITYKPRKIVFMNSEVKRLSGI-DVPIEDSL--RILERLGFSVI----GEYDKFEVSVPSW 449 + PR + + + R+ I IE + + L RLG +V GE + V+ P++ Sbjct: 413 VYPAPRTVEPVTLRLARVHAICGAAIEPAFIEKTLGRLGCTVARAGEGEDLVYTVTPPTF 472 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 R D+ + DL+EEILRI+G+ ++++ +P + L+ +Q TR V +VL S + E Sbjct: 473 RPDLPREIDLIEEILRIWGMGRVEAT-IPAAK-NHIGGLTREQRLTRKVGQVLRSCGLNE 530 Query: 510 VVNWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 +N+SF + G G +E++NP+ A+ + MR SL+PGLL++ N+ + A Sbjct: 531 TMNFSFAAPGDLERIGMTAEGRGCAVELMNPLVAEQTEMRRSLIPGLLQSVEFNITHSTA 590 Query: 566 DFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 + ++E+ ++ EN + ++ AG+ G+ G W+ K RF FD K Sbjct: 591 NVQLYEIGTLFFGRENASAPKEREAVAGVMSGAMG----DVTWNYKPMP-LRF---FDGK 642 Query: 623 ADALSVIEPFVSLDSLRFESG---APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 ++E + +RF A ++ PGR + S VLG+ GE HP+ + +G Sbjct: 643 GVVEELLEQL-RIPKVRFREATGDAYAFLQPGRCAEV-LSGGTVLGWVGEIHPDAREAYG 700 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 + P+ FE+ LD++ + + ++ S V+ DLA +V++ + L +++ Sbjct: 701 IDIPVVAFELNLDAMLAAAGTQEAYRE---FSQFPSVEHDLAIVVNEDVTCEDLERRLRS 757 Query: 740 V-DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +L+ V +FDV++ +G GKKS+A + + T +++ ++V V K Sbjct: 758 AGGKLLVGVRLFDVYRDPVRVGAGKKSMAFALTYRSDDHTLTSEEVEKAHSKLVAKVCKA 817 Query: 798 TNAVLRS 804 T +RS Sbjct: 818 TGGEVRS 824 >gi|169629421|ref|YP_001703070.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium abscessus ATCC 19977] gi|169241388|emb|CAM62416.1| Phenylalanyl-tRNA synthetase beta chain PheT [Mycobacterium abscessus] Length = 827 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 245/821 (29%), Positives = 396/821 (48%), Gaps = 57/821 (6%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL + L + S I +TL IG EVE+V ++ P + +V+ + Sbjct: 1 MRVPYSWLLEVLRVGAPEFTASAADIEETLIRIGHEVEEVVIPGPVTGPLVVGRVVQITE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I +D G+ + ++VCGA N V L V A PG +P + + RK G Sbjct: 61 LTEFKKPIRFCLVDVGEAEPREIVCGASNFAVDDLVVVALPGVTLP-GDFTIATRKTYGH 119 Query: 113 ESTGMMCSEKELML---SDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDC 168 S GM+CS EL L S S I+ LP + A G + L D I D+S+TP+R C Sbjct: 120 TSDGMICSTSELGLGIESSGSPGILVLPPETAAPGADAIAVVGLDDAIYDLSITPDRGYC 179 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGV 225 + VRG+A DL A ++N P + + +P E + +D + K F + V G+ Sbjct: 180 LSVRGLARDLACA-----YDLNFVDPAAVQPLPAEGASLPVHIDAGTGVKRFGLRPVVGI 234 Query: 226 -RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 V+P W+++RL G+R+IS VD TNYV L+ G+P H D + + VR A G Sbjct: 235 DPAAVSPWWLQRRLMLCGIRAISPAVDATNYVMLEIGHPMHAHDKTHVRGDFRVRFATPG 294 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E ++ LD+ E L P +V+IA D + +I G++G +++TDVL+E A+WDP + Sbjct: 295 ETVVTLDDLERRLEPGDVLIADDAGVTAIGGVMGAGSTEMREDSTDVLLEAAVWDPAAVL 354 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRK 403 R+ + L + +++ R+ER VD + L SL+ + GGTA +++ R + + Sbjct: 355 RTQRRLHLHSEAGRRYERSVDPAISVAALDRCASLLCDIAGGTAPAELTDWRADSEARPE 414 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 IV R++G+D R L ++G V+ E D V+ PSWR D+ E ADLVEE+ Sbjct: 415 IVMAADLPARIAGVDYADGVVERRLRQIGAGVVVEGDTLRVTPPSWRPDITEGADLVEEV 474 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 LR+ G+ I S L L+ Q R R V + LA E++ F+ Sbjct: 475 LRLEGLSDIPSI---LPAAPQGGGLTPVQRRRRAVGKSLALNGYTEILPMPFLPAGVFDA 531 Query: 524 FG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE- 577 +G + ++LNP+ +D + ++LLPG+L+A RN+ R AD A+F + V Sbjct: 532 WGLDDNDPRRHTTKVLNPLESDRPELASTLLPGVLEALSRNISRGNADVALFTIGQVVRP 591 Query: 578 NDTPEGQKYMAAGIRKGSSGIEG----------------SGRLWSDKSEERCRFVDLFDA 621 +T + R + + +G R R D+ DA Sbjct: 592 TETTRAIPLLDVSGRPSEAELHALLESLPAQPVHVALVLAGAREPSGPWGRGRTADVTDA 651 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +A VI +D + +G +HPGR I +IV G+ GE HP +++ GL Sbjct: 652 -LEAARVIGRAAYVD-IALRAGEELPWHPGRCAEIVVDGQIV-GHTGELHPAVIERLGLP 708 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-V 740 C E+ LD++P++ +S V +D++ +V + +PA + +++ Sbjct: 709 KRTCALELSLDALPVANPLPAP-----RISPFPAVHQDVSLVVTETVPADAVTEALRDGA 763 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 LI+DV + +V+ G +GEG KS+ ++ + T +D Sbjct: 764 GELIEDVRLVEVYTGPQVGEGNKSLNFRLRFRAADRTLTED 804 >gi|315608224|ref|ZP_07883215.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella buccae ATCC 33574] gi|315250094|gb|EFU30092.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella buccae ATCC 33574] Length = 822 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 249/845 (29%), Positives = 419/845 (49%), Gaps = 65/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQETADALTSCGLEVDALEEVQTVKGGLKGLFVGKVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + E + K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGEQEFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP DAPVG ++Y L SD +I++ +T NRSD + Sbjct: 121 SFGMICAEDEIGVGTDHAGIIVLPEDAPVGQPAAEYYHLESDWVIEIDITANRSDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + ++ P + S+P+++ ++++ CK +A + Sbjct: 181 GVARDLYAWLVQNGHTTSLHRPDCEAFKVDDHSLPIDV--EIENKEACKRYACVSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L+ +GLR I+ +VDITNYV + G P H FDA + + VR G Sbjct: 239 VKESPEWLQNKLRVIGLRPINNIVDITNYVMMAYGQPMHCFDADMVVGHKIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAGI GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGEHDLSICNAEAPMCIAGIFGGKGSGTYETTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKP--R 402 S + G+ TDS YRFERGVD + LK L L GG S DI +++ +P Sbjct: 359 SARRHGLSTDSSYRFERGVDPDNTVYALKQAAILCRQLAGGKVSMDI---KDVYPEPING 415 Query: 403 KIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 +V +N + V L G + E I+ L + E + + VP++R DV+ D+V Sbjct: 416 TLVELNYDYVYNLIGKKIGKETIKNIVTSLEMKIEVETETGLRLLVPAYRVDVQRPCDVV 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSF- 515 E+ILRIYG + ++ +P TQ++ ++ + R ++ ++ + E++N S Sbjct: 476 EDILRIYGYNNVE---IP-TQLKSSLTIAGDEDRKNKLQNLIGEQLVGCGFNEILNNSLS 531 Query: 516 -ISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + E ++++NP+SAD+ MR ++L G L++ RNV+R + FE Sbjct: 532 KLSYYTDLNLNAYTEEHTVKLMNPLSADLGVMRQTMLFGGLESIVRNVNRKSGNLRFFET 591 Query: 573 SHVYENDTPEGQKYMAAGIRKGSS------------GIEGSGRLWSDKSEERCRFVDLFD 620 + Y D K+ A KG + IEGS W +E+ ++ Sbjct: 592 GNCYHYDK---DKWSAENPVKGYTQETHIALWVTGKHIEGS---WIHPTEDST----FYE 641 Query: 621 AKADALSVI-EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 KA ++ V ++ + + + G S + T L G I F Sbjct: 642 LKAYVENIFRRAGVGAGAVVVQKSENNIFSKGLS--MMTRGGKALAELGIVDLKIKKTFD 699 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 LS + ++ D++ + KK +S V RDLA ++D + + + + Sbjct: 700 LSQDVYFADINFDNVMKAIKKNELV--FTEISKYPAVSRDLALLIDNGVEFAEIEQVARQ 757 Query: 740 VD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + +L+ V +FDV+QG++L EGKKS A+ ++Q T D I +M ++++N+ K Sbjct: 758 TEKKLLKKVELFDVYQGRNLPEGKKSYAVNFILQDDTKTLNDKAIDAIMQKLIKNLTTKL 817 Query: 799 NAVLR 803 A LR Sbjct: 818 GAELR 822 >gi|156741424|ref|YP_001431553.1| phenylalanyl-tRNA synthetase subunit beta [Roseiflexus castenholzii DSM 13941] gi|156232752|gb|ABU57535.1| phenylalanyl-tRNA synthetase, beta subunit [Roseiflexus castenholzii DSM 13941] Length = 833 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 257/854 (30%), Positives = 426/854 (49%), Gaps = 73/854 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDNREALSPF-----TIVKVLSV 52 M+ LSWLK+ +D +S+E++ + LT GLE +E++ A P+ I +L V Sbjct: 1 MRVPLSWLKEFVDITLSVEELAERLTRAGLECEGIERIGVEGADLPWDPEKIVIGGILEV 60 Query: 53 ERNPDLDCAILR-IDTGKHQEIQVVCGAPNV-------RVG--LLGVWAPPGSCIPENN- 101 ++P+ D +L +D G VV GAPN+ R+ L GV+A G+ + + + Sbjct: 61 RQHPNADRLVLADVDYGAGAPHTVVTGAPNLFPYKDKGRLSQPLKGVFAREGAELYDGHA 120 Query: 102 -----MIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI 156 M + R +RGI S M+CSEKEL LS+D I+ LP DAPVG L DYL D + Sbjct: 121 EGWVKMRLKGRPVRGIMSDAMLCSEKELGLSEDHEGILILPDDAPVGMPLRDYL--GDVV 178 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 + + PN + C+ + G+A ++ A L+ ++ I ++ +++ LC Sbjct: 179 LKFDVLPNMARCLSILGVAREIAALTGASLRMPEMNVVEHGPPIEGRVRVTIEEPDLCPR 238 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV- 275 F ++GV +P WM++RL G+R I+ +VDI+NYV L+ G P+H+FDA R++D Sbjct: 239 FTATLIEGVTIGPSPLWMQRRLTMAGMRPINNIVDISNYVMLEFGGPNHMFDADRVADQH 298 Query: 276 LTVRRACSGEKILALDNQEYDLSPD------NVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 L +R A GE+++ LDN+E++L +++ S+AG++GG + TT Sbjct: 299 LIIRLARLGERLVTLDNKEHNLDASLGGGMLPLLVCDPRGPLSLAGVMGGASSEVSATTT 358 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TA 388 VL+EVA+WDP I R G L +++ RFERGVD + V + +SL+ + GG A Sbjct: 359 RVLLEVAVWDPTIIRRMGTALRARSEASKRFERGVDYELPPLVQRRALSLLQRIAGGKVA 418 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSV 446 + ++P + EV+R+ G+ + + +L LGF+ +I V+V Sbjct: 419 QGMVDNYPRPWQPVILDLTPREVRRIVGVALSATEIADLLRPLGFACDLIDNGAVVRVTV 478 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED----KRNLSLQQSRTRYVKRVL 502 PS R+DV ADL EE+ R+YG D+I PLT + D +RN S + R V+ +L Sbjct: 479 PSSRRDVTMLADLCEEVARMYGYDRI-----PLTLMADALPEQRNNSSLELELR-VRDLL 532 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGR 558 A + E + +S S R L + NP++ + +R SLLP LL+A + Sbjct: 533 AGAGLDEAITYSLTSMAAVAAVNPADADPSRYLRLANPLTPEREFLRRSLLPTLLEALAQ 592 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFV 616 N+ R +FE+ VY P + R+ + + G R W E F+ Sbjct: 593 NL-RERERVLLFEIGRVYLKRAPGSDEPRPEEPRRLALALAGRRHERAWHTSDET---FM 648 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAP----SWYHPGRSGIIKTSAEIVLGYFGEFHP 672 D FD K V+E ++ ++ P +HPGR+ ++ VLG GE HP Sbjct: 649 DFFDLKG----VVETLLARLNISGVQYVPVSDDPRFHPGRAARLERDGR-VLGVIGELHP 703 Query: 673 NILDFFGLSNP-ICGFEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 ++ + ++ P E+ L+ I + + R + +S +DL+ + +PA Sbjct: 704 DVCERLEIAAPRAMAAELDLELIGALIEPVRYRA-----ISRYPATTQDLSLVAAIDVPA 758 Query: 731 GTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + V I K L++ +T+FDV++ + +G GK+S+ +++ + T D +I + + Sbjct: 759 ERVTVTIRKYAGALLESLTLFDVYESEQVGVGKRSLTYRLVFRAPDRTLNDAEIAKIRQK 818 Query: 790 IVENVVKKTNAVLR 803 IV + A +R Sbjct: 819 IVRGLEHDLGATIR 832 >gi|297181106|gb|ADI17304.1| phenylalanyl-tRNA synthetase beta subunit [uncultured actinobacterium HF0070_17F14] gi|297181197|gb|ADI17392.1| phenylalanyl-tRNA synthetase beta subunit [uncultured Verrucomicrobiales bacterium HF0070_30L02] Length = 790 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 255/825 (30%), Positives = 407/825 (49%), Gaps = 56/825 (6%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK TLSWL++ D ++ +TL+++GL VE+++ E + KVL + +PD Sbjct: 1 MKVTLSWLREFAPGIDGDPVELGETLSALGLAVEEMETIGEIADGVVLAKVLDLRPHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ +D G Q +QV CGA N+ VG L +A G+ +P N M + R++RG S GM Sbjct: 61 DKIQLVDVDRGGGQPLQVCCGAFNMAVGDLIPFATIGTVMP-NGMEIAQREMRGQMSNGM 119 Query: 118 MCSEKELMLSDDSASIM---ELPID-APVGGRLSDYLELS-DPIIDVSLTPNRSDCIGVR 172 C+ E+ L D I ++ +D A +G L++ + + D + D+ + NR D + V Sbjct: 120 CCAADEIGLVSDDNGIYILNDVVVDGAELGMPLAEAIGMQVDVLWDLEVNANRPDAMSVA 179 Query: 173 GIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A DL AA LG + E I+ + E + + ++D LC F ++ VR Sbjct: 180 GVARDLAAA-LGVEFRFPEYEITT--TDEPVDGLLDIRIEDPELCGRFVATVLRNVRVGE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM+QRL +G+R I+++VDI+NYV L+ G P+H FD + I D L +RRA GE ++ Sbjct: 237 SPAWMQQRLIQLGMRPINSIVDISNYVMLELGQPNHTFDLATIPDGRLNIRRARDGETLV 296 Query: 289 ALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E L ++ VI ++ I S+AG++GG D+TT+VL+E+A WDP +I+R+ Sbjct: 297 TLDDIERSLETNDGVITNESDTIISLAGVMGGATTEISDSTTEVLLEMAWWDPPSISRTV 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIP-VLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 K L + +++ RF RG D I ++ V L S T + Sbjct: 357 KRLNVPSEASSRFRRGADWGDNIDRAMRRFVQLAAESGITAVSGFVDVPGTTPDRAPVPV 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++V L G ++ +D L +GF V D V VP+WR D + D+ EE+ R+ Sbjct: 417 RVAKVNGLLGTELTADDMAAHLSSIGFEVTIAGDTLHVVVPTWRWDTATETDIAEEVGRM 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 +G + I P + + +D LS Q R V+ VL E + F++ G Sbjct: 477 FGYENI---PRTVPKGDDPGGLSQYQKDRRLVREVLLGAGCDETLPMPFLAPGDLAKAGL 533 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + + NP+ A+ S +RTSLLPG LKA N D FE+ HV+ P Sbjct: 534 PEDGVTLTNPLHAEESVLRTSLLPGQLKAIAYNQSHRNPDVRFFEIDHVFLPAADGEILP 593 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + ++++A I EE V L DA AL++ P V L R Sbjct: 594 DEREHLAVAI----------------AGEEAPTAVALLDALDRALAL--PNVQLAPAR-- 633 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKK 700 P+ HP RS + + G+ GE P +L+ + + + E+ L ++ Sbjct: 634 ---PAGLHPTRSADVVIAGR-TRGHVGEVDPAVLEAYSVEGRVAWLELDLGAVLDGPHGN 689 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLG 759 RT T +S DLAF+V + + A + ++ K L+ DV +FDV++G + Sbjct: 690 RTYTP----VSKFPSSDIDLAFVVGEDVAASRIEASLRKGGGALLTDVGLFDVYRGPGVD 745 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G +S+ ++ Q T D D+ + ++ VVKKT AVLRS Sbjct: 746 NGARSLTYRLRFQATDRTLTDSDVADVRQACIDQVVKKTGAVLRS 790 >gi|256840131|ref|ZP_05545640.1| phenylalanyl-tRNA synthetase, beta subunit [Parabacteroides sp. D13] gi|256739061|gb|EEU52386.1| phenylalanyl-tRNA synthetase, beta subunit [Parabacteroides sp. D13] Length = 820 Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 257/845 (30%), Positives = 414/845 (48%), Gaps = 67/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++LD D+ E++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYLDFDLEPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGEAPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP DA VG DY + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPADAVVGTLAKDYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K + P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPAELRRPSVDAFKIDDETPGVEVV--VENTEACPRYSGVTIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL+ +GLR I+ +VDITN++ + G P H FDAS+I + + V+ A +G Sbjct: 239 VKESPEWLQNRLRVIGLRPINNVVDITNFILHELGQPLHSFDASKIKGNKVIVKAAEAGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + I G+ GG +G + TTDV +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIGGVFGGLDSGVTEETTDVFLESACFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KP 401 + + G+ TD+ +RFERG+D + VLK LI L GG I A Y +P Sbjct: 359 TARRFGLNTDASFRFERGLDPNNTMYVLKRAALLIQELAGGK---ITGAVQDVYPTVAEP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + ++ L G D+P+E IL L ++ E + + VP +R DV+ D++ Sbjct: 416 YTVEVTYEKINTLIGKDIPVETVKSILASLEMEIVSETAEGLTLHVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R + L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSWKLQNLISEQLCGCGFNEIMNNS 529 Query: 515 FISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + E ++NP+SAD++ MR +LL G L++ N+ R + Sbjct: 530 LT---RSAYYTDLSVYPEAHCVMLMNPLSADLNCMRQTLLFGGLESIEHNMKRKNGNVRF 586 Query: 570 FEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKA 623 +E + Y+ D + + +A GI +G W+ E+ +++ KA Sbjct: 587 YEFGNCYDYNIDNKKEDETLAQFSEDYRLGIWVAGNRVENNWAHPDEKSS----VYELKA 642 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V + + F + Y G S I T + LG G + + Sbjct: 643 YVENILARLGVDMKRVIFGNLTNDIYSSGLS--ITTGSGRQLGTMGIVSKKLRKMLDID- 699 Query: 683 PICGFEVYLDSIPISQ-KKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 EVY + +Q K K KV +S VKRDLA ++D+ + + I K+ Sbjct: 700 ----MEVYYAELSWTQLMKEIKKAKVTFSEISKFPAVKRDLALLLDKSVQFSEVEKIAKD 755 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 DR L+ +V++FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K Sbjct: 756 SDRKLLKEVSLFDVYEGKNLPAGKKSYAVSFFMQDESKTLNDKQIDAIMKKIQTNLEQKL 815 Query: 799 NAVLR 803 A LR Sbjct: 816 GAQLR 820 >gi|15606806|ref|NP_214186.1| phenylalanyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] gi|12644560|sp|O67620|SYFB_AQUAE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|2984040|gb|AAC07582.1| phenylalanyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5] Length = 775 Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 244/810 (30%), Positives = 410/810 (50%), Gaps = 41/810 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP-DL 58 MK SWL + ++ +DVS E+I + L+ +E L KV+ V+ +P Sbjct: 1 MKVPYSWLSEFVELSDVSPEEIAEKLSLRSVEATVETFGIDLDGVVFGKVVEVKEHPTKK 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 A++++ +H I VV +VR G + A P + + NM V R+ G+ S G++ Sbjct: 61 KLAVVKVQVQEHIFIDVVTVDKSVREGDGVIVALPNAKV--GNMCVTEREFDGVVSKGLL 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S +EL L + S ++++ D G ++ L + II++ +TPNR D + VRG+A DL Sbjct: 119 LSAQELGLEEKSEGVLKIHEDFKPGTDANEILGFGEKIIEIDITPNRGDMLSVRGVARDL 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A + +L + P E+ I+ + +D CK + ++GV +P ++++RL Sbjct: 179 SA--IFRLPKKKPEEPTYEETGEFFIEIEDED---CKRYRGVVIEGVEIKESPLYIKKRL 233 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G++SI+ +VDITNYV L G P H FD S++ + VR A GEKI+ LD +E +L Sbjct: 234 WQCGIKSINNVVDITNYVMLRDGQPLHAFDLSKVEGGIIVRSAKKGEKIITLDGEERELD 293 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D +VIA + ++AG+IGG +G +NT D+L+E A ++P + ++ K LGI T+S Y Sbjct: 294 EDILVIADREKPLAVAGVIGGLESGIKENTKDILLESAYFNPFRVRKASKKLGIQTESSY 353 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFER VD++ + + V LIL GG + YKP+K+ + R +G Sbjct: 354 RFERNVDIERVDRAQDYAVYLILKHAGGKVKVVKDVYREKYKPKKVFLPQGKYIRYAGES 413 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPL 477 E+ IL+ L EV VPS R D++ DL+EEI+R+ G + SE L Sbjct: 414 YKNEEVKEILDALEIPNEIMRCGVEVLVPSHRSFDIQRDVDLIEEIMRVKGYEHYTSETL 473 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 L + + L + VK+ L + + EV+N+SF + L ELE++NP+ Sbjct: 474 KLPSIAN-----LWKDNLLEVKKYLRDKGLTEVINFSFEDSKLYELLNLPLPELEVINPL 528 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 + MR +L+ LL+ N D A+FE+ V+ + E + G Sbjct: 529 NPTQRYMRNTLITSLLRTAVYNDRNYNYDQAVFELGKVFFKEGEENR-----------LG 577 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKAD--ALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 I G EE+ DL + A AL +EP F + ++ HP G Sbjct: 578 ILLKGNKPRTLKEEKWEPYDLTEIIAGIFALFGLEP-------EFRNAKRNFLHPYVQGE 630 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 + E V G+FG+ HP I L E+ ++ + +S+K+ ++V + P Sbjct: 631 VYLEGEFV-GFFGKLHPKIAKELELKGEPFVAEIEIERV-LSKKRLPHYREV---AKFPP 685 Query: 716 VKRDLAFIVDQHIPAGT-LVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD+A ++D+ + L++ + L+++V VFDV+ G+ +GEGKKSVA++++++ Sbjct: 686 VVRDIALVMDKELDVNKLLIDTKSQIGELLEEVRVFDVYTGEKVGEGKKSVAVRLVLRSK 745 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + +D++ L++++V + +K LR+ Sbjct: 746 TGSLKDEEANELVNKLVNYLKEKYGVELRT 775 >gi|218441654|ref|YP_002379983.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7424] gi|218174382|gb|ACK73115.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7424] Length = 809 Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 244/831 (29%), Positives = 428/831 (51%), Gaps = 49/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +++WL++ +D ++ E++ +TLT G+EVE +++R L+ ++ K+L E++P+ D Sbjct: 1 MRISVNWLRELVDVTLTPEELAETLTIAGIEVEDIEDRRQLADGVVIGKILKREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +VCGAPN R + A PG+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCEVDIGGESPSTIVCGAPNARADIFVAVATPGTYLPAIDLKIKPAKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ +S I + +G + L L D I+D+S T NR+D + + G+A + Sbjct: 121 CSLAELGLAKESEGIHIFSDETLELGTDVRPLLGLDDVILDISPTANRADALSMVGVARE 180 Query: 178 LVAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A G L ++ P LS ++ + D+ D + C + ++GV +P W++ Sbjct: 181 VAALTDGSL---HLPQPPNLSIKTKKGALTLDIADDTACPAYIGTIIEGVNIAPSPEWLQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKIL 288 +RL+A G+R I+ +VD+TNYV L+ G P H FD R+ V + VR A E + Sbjct: 238 KRLEAAGVRPINNVVDVTNYVLLEWGQPLHAFDQDRLKTVAGGKSLTIGVRFAQEKETLK 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L N++I ++ +IAG++GG+ + T ++++E AL++PI I RS K Sbjct: 298 TLDGQERVLVAQNLLITANDVPVAIAGVMGGEDTEVYEGTQNIVLEAALFNPITIRRSSK 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--------RNITYK 400 + G+ ++S R+ERGV+ + ++LI L GG IA R+I + Sbjct: 358 SQGLRSESSARYERGVNQIELDLACARAIALITELAGGKVVHQVIADARPDHHTRSIELR 417 Query: 401 PRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWR-QDVEEKA 457 +I + VK+ I V +D RIL+ LG + + + + V VPS+R +D+E + Sbjct: 418 LERIHQILGNVKKGDSIGQVEGDDVDRILKALGCQLTETQPNIWTVIVPSYRYRDLEREI 477 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DL+EE+ R+YG D + LP + + L+ ++ R ++ + + EVV +S + Sbjct: 478 DLIEEVARLYGYDHF-CDTLP--RKTEPGGLNAEEQLQRKIRETFRAVGLTEVVQYSLVK 534 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E+ E+ ++NP+ + S +RT+LL GL+ A N + FE+ +++ Sbjct: 535 PEKD--------EVVLVNPLFVEYSALRTNLLNGLIDAFEYNQSQGNGALNAFEIGRIFQ 586 Query: 578 NDTPEGQKY--MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 T +G K + +GI G+ + GR W+ + + +DAK SV E + Sbjct: 587 K-TKDGLKEEDLLSGILGGN--LTAGGR-WTKGGKPDT--MSWYDAKGLLESVFERL-GI 639 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 HPGR+ + + LG FG+ HP + GL + + FE+ L+ + Sbjct: 640 TVEYQPDKTDERLHPGRTASLWLEGK-QLGIFGQLHPQLRQDKGLIDEVYAFELNLEVLL 698 Query: 696 IS-QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 + QK T + S+ V+RDLAF + L +K L+ V +FD + Sbjct: 699 KTLQKDELITPRYQPYSTYPAVERDLAFFAPVDLSVFQLEKAMKKAGGNLLAGVELFDEY 758 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +GK++ EG++S+A + + T D ++ + ++I E +VK+ N LRS Sbjct: 759 KGKNVPEGERSLAFSLAYRVGDRTLTDTEVDPIHNKIREALVKEFNVTLRS 809 >gi|329122111|ref|ZP_08250719.1| phenylalanyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] gi|327466918|gb|EGF12434.1| phenylalanyl-tRNA synthetase beta subunit [Dialister micraerophilus DSM 19965] Length = 823 Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 237/834 (28%), Positives = 415/834 (49%), Gaps = 54/834 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WL +D ++ E + +TLT G+ VE V + +S K+L +E++PD Sbjct: 1 MNVSLKWLATLVDIQGINAEDMAETLTVDGIPVEHVVYPAKGISNVKTGKILEIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP------------ENNMIVN 105 + + ++D G+ IQ+V GA NV+VG + A G+ +P + ++ + Sbjct: 61 NKLVVCQLDIGEKDTIQIVTGASNVKVGQIVPVALHGAHLPAKHDASKPGGLAKGDIKIK 120 Query: 106 VRKIRGIESTGMMCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG++S GMMCS EL + +S IM LP P+G + +L D I ++ Sbjct: 121 KSKLRGVQSDGMMCSVGELGLDCNLFIGVESEGIMILPESTPIGIDFTTLYDLDDVIYEM 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 LT NR+DC + G+A ++ A K+ IS E+I +++ C F + Sbjct: 181 ELTANRADCFSMIGMAREVGAIFKRKVNLPEISIEEKGETIKGRADLAIENPEYCSRFGL 240 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 ++ V+ +P W+ RL++ G+R I+ +VD NYV L+ G P H +D +IS LT Sbjct: 241 RLIENVKIGRSPEWIENRLRSNGIRPINNVVDAANYVMLEMGQPLHTYDYDKISGHSLTC 300 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A E I+ LD +E L P ++VIA + IAG++GG + + T ++L+E A++ Sbjct: 301 RHAKKDEVIITLDEKERKLLPTDLVIADEKGPVCIAGVMGGLDSEVTNKTKNILLESAVF 360 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNI 397 D +I R+ + LG+ +++ R+E+GV+ + + L ++L T A DI + Sbjct: 361 DSASIRRTSRRLGLRSEASGRYEKGVNPEASLDALNRFCQILLEQNACTVARDILDLYPV 420 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE-K 456 + + ++ E+ + G+++P E + IL RL F+V + +K +V VP +R D+E Sbjct: 421 PKEKQTVITTVEEINKYIGMNIPKETIIDILTRLSFTVEEKENKLKVEVPLFRLDIESGM 480 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL EE+ R+YG +I + P + + R ++ + V+ L M E + +SF+ Sbjct: 481 PDLAEEVARVYGYSKIPN-TTPWSAIVKGRMTKEMETLIK-VQNSLIENGMTETLTYSFM 538 Query: 517 SKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 K L +++ + I+NPIS + MRT+LLPGL + N+ + + AIFE Sbjct: 539 HKNALKLLNYTEKDFVNKAIPIINPISEEYPVMRTTLLPGLFRTLKYNLSQKNNNLAIFE 598 Query: 572 VSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 VY + PE + M +G+ G++ EG + D +D KA Sbjct: 599 TGKVYYPKELPLKELPE-EVVMISGLLCGNTENEGYPN--------EVKKYDFYDIKAIV 649 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +V+ + + + + HPG S +K VL FGE HPN+LD + + Sbjct: 650 ENVLSN-IGIKNYEIRRSSHPTLHPGISAEFVKDGC--VLAIFGEIHPNVLDVLNIKEKV 706 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRL 743 GF + L ++ ++ K+ + V+RDLA V + NII K + Sbjct: 707 FGFIMELKNLDKYADEKIIYSKIAKYPA---VERDLAITVPVSKSNNYVENIICKAAGKY 763 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ + +FD++QG+ + G KS+A + + T D+++ +++I+E + K+ Sbjct: 764 LESLKLFDLYQGEQIKSGYKSMAYSLKFRLKDRTLTDEEVNQWINKIIEELSKE 817 >gi|257887554|ref|ZP_05667207.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,141,733] gi|257823608|gb|EEV50540.1| phenylalanyl-tRNA synthetase [Enterococcus faecium 1,141,733] Length = 806 Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 228/822 (27%), Positives = 422/822 (51%), Gaps = 35/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL +LD ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYLDLSNVTPKELADKMSVTGIEVEGITVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFSYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A + SS+ +I+ ++D + + + ++GVR +P Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSQLASDKIQVTVEDKEVVPAYQIRIIEGVRIQPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R I+ +VD+TNY+ L G P H FD ++ S+ + VR A E ++ L Sbjct: 240 QWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSNEILVRHAKENETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R+ K Sbjct: 300 DGESRKLTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRRTAKQF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 360 NLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G + +++ I E LGF + + V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINQYLGTSLVVKEVNEIFEALGFGYEEKDHVYSVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F + Sbjct: 480 DQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVIKES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END + + Sbjct: 538 NITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP---RAH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + ++ + I G +W +K + + + VD F K ++ E + + +++ Sbjct: 595 LPQEVKHAAIAISG---VWEEKDWQTKAQNVDFFTIKGLLENLFEQLGIHEDIHYQTVTE 651 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 652 IKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAAQ 704 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K +V ++ V RD+A +V + + L +I + R + D+ +FDV+QG+++ +G Sbjct: 705 KGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIDSAAGRFLTDIQLFDVYQGENIEKG 764 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T D++I MD++ + + + A +R Sbjct: 765 HKSMAYSLTFVNPEATLTDEEINKAMDKVTKALTETLGASIR 806 >gi|256962288|ref|ZP_05566459.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|293383317|ref|ZP_06629232.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|293387526|ref|ZP_06632075.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|312905824|ref|ZP_07764844.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 512] gi|312909121|ref|ZP_07767980.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] gi|256952784|gb|EEU69416.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis Merz96] gi|291079340|gb|EFE16704.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis R712] gi|291083036|gb|EFE19999.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis S613] gi|310628163|gb|EFQ11446.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 512] gi|311290545|gb|EFQ69101.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis DAPTO 516] Length = 807 Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 230/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + EK++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEKLI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S I + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAIGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|229546205|ref|ZP_04434930.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis TX1322] gi|256852766|ref|ZP_05558136.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis T8] gi|307291099|ref|ZP_07570984.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] gi|229308729|gb|EEN74716.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis TX1322] gi|256711225|gb|EEU26263.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis T8] gi|306497753|gb|EFM67285.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0411] Length = 807 Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVSHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QGK Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGK 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|300771236|ref|ZP_07081112.1| phenylalanyl-tRNA synthetase beta subunit [Sphingobacterium spiritivorum ATCC 33861] gi|300761906|gb|EFK58726.1| phenylalanyl-tRNA synthetase beta subunit [Sphingobacterium spiritivorum ATCC 33861] Length = 799 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 240/823 (29%), Positives = 398/823 (48%), Gaps = 44/823 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERN 55 M + +WLK+ +D D + E+I LT IGLEVE ++ ++ L + +V + E++ Sbjct: 1 MNISYNWLKNFVDIKDKTPEQISHILTDIGLEVEVLETFQSIPGGLEGLVVGEVKTCEQH 60 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRG 111 P+ D + +D G+ + + +VCGAPNV G + A G+ + +N KIRG Sbjct: 61 PNADRLRVTTVDVGREELLHIVCGAPNVAAGQKVIVATVGTTVHPLEGEPFKINKSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI-IDVSLTPNRSDCIG 170 S GM+C+E E+ L I+ LP D PVG DY ++D ++ LTPNR+D Sbjct: 121 EVSEGMICAEDEIGLGKSHDGILVLPADTPVGQTARDYFHITDDYRYEIGLTPNRADAAS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A DL +IS S+ES ++ + ++ + + GV + Sbjct: 181 HLGVARDLAGFFRTSFTLPDISAFQSAES-AVQTTVSVRNTDAAPRYTGVNISGVTVKES 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P+W++++L +G+R I+ +VD+TNYV D G P H FDA +I+ + VR A GE Sbjct: 240 PDWLKEKLNVIGIRPINNIVDVTNYVLHDLGQPLHAFDADQIAGQQVIVRNAAEGEAFTT 299 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD LS +++VIA + IAG+ GG H+G +T +V +E A ++ +++ ++ K Sbjct: 300 LDGVARTLSAEDLVIADAEKPMCIAGVFGGLHSGVSASTVNVFLESAYFNSVSVRKTAKR 359 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 + TDS +RFERG D LK LIL + GGT +S I P + Sbjct: 360 HALKTDSSFRFERGTDPNMTAFALKRAALLILEVAGGTVSSAITDLYPDPVAPFEFTVNY 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 + V+RL G +P ED I+ LG +V E + + V VP ++ DV + D+VEE+LRIY Sbjct: 420 ANVQRLIGKAIPTEDIRSIITSLGIAVAKENEHELLVQVPPFKVDVTREVDIVEEVLRIY 479 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLF 524 G + I+ + Q+ N S + R + ++ L + E+++ S E Sbjct: 480 GYNNIEIK----QQINASLNTSEKPDREVVLNQIADLLIANGYNEILSNSLTKSE---YV 532 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HVYENDTP 581 +++LNP+S+D+ MR +L+ L A N R D FE H+ E Sbjct: 533 DDVDTAVKLLNPLSSDLDTMRQNLVFSALTAVSYNQKRKSTDLKFFEFGRTYHLLEEGYQ 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 E Q + G+ +GR +K + V ++ KA A+ I +++ L Sbjct: 593 ERQHF----------GLALAGRQTGEKWSGEAKLVTFYNIKA-AVDTIIRRLNIQGLEVT 641 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 +++ G S + G + + D G F D + + R Sbjct: 642 DTDSTYFDYGLSYKKGQKTLVAFGAVAQTNLKKADVDGQV-----FFADFDWDQVLKVIR 696 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGE 760 + K +S V+RDLA +VD+ + L + +K +L+ +V +FDV++G L + Sbjct: 697 KNSIKYKEVSKFPAVRRDLALLVDEAVTFDKLRQVAVKTERKLLTEVNIFDVYKGDKLPQ 756 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS A+ ++Q + T D I ++ +++ N K+ AV+R Sbjct: 757 GKKSYALSFVLQDEEKTLADKQIDAIVQKLILNFEKELGAVVR 799 >gi|319401547|gb|EFV89757.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis FRI909] Length = 800 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 243/826 (29%), Positives = 415/826 (50%), Gaps = 49/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +P+ D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKNLVVGHVLSKTPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKIFESGIYVFPEAVKPGTDALEALYLNDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVAALYQTKMNKPKLTSNESQESAKDELTIEVKNEDKVPYYSARVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVSEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-------KPRKI 404 + ++S RFE+G+ + + V L AS + I+Y P KI Sbjct: 360 LRSESSSRFEKGIATE----FVDEAVDRACYLLETYASATVLKDRISYGDLGSFVTPIKI 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +V R G ++ E+ + I E+LGF + V+VPS R+D+ K DL+EE+ Sbjct: 416 T--ADKVNRTIGFNLTDEEIIDIFEQLGFKTENKNGDIIVNVPSRRKDISIKEDLIEEVA 473 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D I S LP+ + L+ +Q +TR VK L + + + +S +SK + F Sbjct: 474 RIYGYDDIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLDQAITYSLVSKNHATDF 532 Query: 525 GGGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 R +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + Sbjct: 533 ALQNRPTIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGE 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 P+ +Y+ +GI G + W DK E VD + K V E + D Sbjct: 593 LPDEVEYL-SGILTG----DFVNNKWQDKKEP----VDFYLTKGIVERVAEKLNLQFD-- 641 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F +G HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 642 -FRAGQIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVS 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 K + RD+A V+ + + L++II +N + +++D VFDV++G+ Sbjct: 699 VGYINYKPIPRFPG---ATRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEH 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +GKKS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 756 LEKGKKSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|227488141|ref|ZP_03918457.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glucuronolyticum ATCC 51867] gi|227092003|gb|EEI27315.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glucuronolyticum ATCC 51867] Length = 842 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 246/848 (29%), Positives = 408/848 (48%), Gaps = 79/848 (9%) Query: 10 DHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAIL 63 DH D V+ E + +G E E + E P +V ++E + P +C + Sbjct: 18 DHADWSVNSEDLDSGYVRVGFETEGYEPIEETTGPLVFGRVENIEELTGFKKPIRNCKVN 77 Query: 64 RIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 D E+Q ++CGA N + G L V + PG+ +P ++ RK S GM+CS Sbjct: 78 VGDANGTGELQNIICGARNFKEGDLVVISLPGTVLP-GGFKISARKTYDHVSEGMICSAA 136 Query: 123 ELMLSD-DSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 EL L+D + I+ LP D G ++ L L + + DV++TP+R + RG+ +L + Sbjct: 137 ELGLTDAQNKGIITLPDDFGTPGEPAAEKLGLKETVFDVNITPDRGYALSARGLTRELAS 196 Query: 181 A------GLGKLKEIN----ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 A + E+ + P ++ P++I +D + + F + V G+ Sbjct: 197 AFNLNFVDPAEDPEVAGLDLPAIPAATGHAPIDIS--IDPKTQTRRFGLRHVTGIDPEAE 254 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+++ L GLR I+A D+TNYV L G P H FDA +IS LT+R A GE A Sbjct: 255 SPYWLQRELMLSGLRPINAPTDVTNYVMLLLGLPMHAFDADKISGGLTIRNAQKGETFQA 314 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN-TTDVLVEVALWDPINIARSGK 348 +D+ + L ++VVI + QS+AG++GG + +DN TT+V E A+W+P+ +AR+ + Sbjct: 315 IDHTNHKLHEEDVVICDETGPQSLAGVMGGTTSEIEDNKTTNVFFEAAVWEPVRVARTSR 374 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 I +D+ R+ERGVD+Q + L +L++ + GG A+ +P I Sbjct: 375 RRKISSDASRRYERGVDVQLVEVALDIACALLVKIAGGEATGERFLYGEVAEPAPITMDI 434 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + ++G++ + + LE +G +V + V P+WR D++EK DLVEE+ R+ G Sbjct: 435 AYPSSVAGVEYGADAVVGRLEEIGATVTRDGGTLTVVPPTWRGDLQEKCDLVEEVTRLEG 494 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--- 525 +D+I S +P+ D LS Q R R+V LA +E++ FI+ + +G Sbjct: 495 LDKIPSI-IPVAPAGD--GLSQSQLRRRHVTHALAYNGYVEILPTPFIATDTFDTWGLDK 551 Query: 526 -GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN----- 578 +R+ + + NP+ +D + + T+LLP +L A RNV R D A+F V V N Sbjct: 552 DNERRQVVTVQNPLESDRAVLGTTLLPSMLDAVRRNVVRGAHDLALFGVEQVAINHGDGK 611 Query: 579 -------------------DTPEGQKYMAAGIRKGSSGIE---GSGRLWSDKSEERCRFV 616 +T Q AA + G+ E G GR ++ F Sbjct: 612 SPMLDTSHRPSDEEVAHLRETLPSQPLYAATVGCGNEEFEGPWGEGRTYT--------FA 663 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 D ++ + +++++ + +HPGR I E+V G+ GE HP IL+ Sbjct: 664 DAIESARLVARAADVDITVENADYLP-----WHPGRCAAILVDGEVV-GHAGELHPQILE 717 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VN 735 GL C E+ + ++P + LS+ +D+A +VD+ +PA + Sbjct: 718 RLGLPKRTCAMEMNISALPFAPSAPAPV-----LSAFPTNLQDVALVVDEDVPAEAVRAT 772 Query: 736 IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + + L + V +FDV++ +SLGE KKS+A V + T DD+ VE Sbjct: 773 VQEGAGELAEKVELFDVYRSESLGENKKSLAFAVTFRAPDRTLTDDEASAARHAAVELAA 832 Query: 796 KKTNAVLR 803 ++ AVLR Sbjct: 833 ERHGAVLR 840 >gi|66773913|sp|Q6MEA6|SYFB_PARUW RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 799 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 237/816 (29%), Positives = 403/816 (49%), Gaps = 43/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ LSWLK+++D ++ +I LT GLEV+ + + S + VL VE++P+ D Sbjct: 1 MRIPLSWLKEYIDLNLEPVEIAKILTMAGLEVDGYEEIGKGFSGVIVGDVLEVEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTGM 117 ++ + + + QVVCGA N R GL +AP G+ + + ++K +RGIES GM Sbjct: 61 KLLIALVSDGKEIHQVVCGASNCRKGLKTAFAPVGASLIDEGKEFKIKKGKLRGIESNGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS KEL +S++ IMEL G L+ SD I ++SLTPN C + G+A + Sbjct: 121 LCSAKELQISNEDDGIMELSEHLQAGTALNTLY--SDTIFEISLTPNLGHCASIVGVARE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA L+ ++ I + D++ C + +K V+ +P+W++ + Sbjct: 179 LSAATSHPLRYPHLVFKEEGNLINNSLTLDIEAKEACSRYTCRVIKNVKVGASPDWLKAK 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 ++ GLRS++ +VD+TNYV L+ G+P H FD + + VR A GE LD +E Sbjct: 239 IEKSGLRSVNNIVDVTNYVLLEMGHPLHAFDYDLVKGKKIVVRMAQEGEIFETLDGKERI 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L ++VIA + +IAG++GG+++ + TT++++E A +DPI + ++ K LG+ TD+ Sbjct: 299 LKDSHLVIADSEKPIAIAGVMGGRNSEVSEKTTNIILESAFFDPIFVRKTSKQLGLQTDA 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNSEVKRLS 415 RFERG D +I VL LI + GG D I + + I S + ++ Sbjct: 359 SKRFERGTDPNQLISVLNRAAMLIQMVAGGIIEDSILDEQTKDFLELTIRCRLSRINQIL 418 Query: 416 GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + + I + LGF + D F V VP++R DV+E+ DL+EE+ RIYG D I Sbjct: 419 GTTLSRGEVETIFQSLGFHYQWDGQDSFMVCVPTYRTDVKEEIDLIEEVARIYGYDHIPR 478 Query: 475 E------------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 P+ L + E + L + + ++ L ++ VV + E V Sbjct: 479 NGGRYQTSKLPDAPIYLFEKEIQSYL-IAEGLQEFITCDLIGPTLVNVVQNLSMPAEAIV 537 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 ++LNP S + S +RTSLLPGLL+ N+D FE+ ++ D Sbjct: 538 ---------KVLNPTSIEQSILRTSLLPGLLQVVKYNLDHQNHQINGFEIGRIHFKD--- 585 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G +Y + GI SG EE+ R D +D K ++++ + ++ +F++ Sbjct: 586 GDQYQEQSV----VGILLSGFSQPYHFEEKKREYDFYDLKGIIENLLKE-LGIEKPQFKN 640 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +H GR + E+ +G FGE HP+I +S I E L + + T Sbjct: 641 LDLKTFHSGRQASLFVD-ELEVGSFGEVHPSIQRRLDVSQRILFGEFNLHDL---MQVAT 696 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 K +KV L+ +RD F + +P ++ I + L+++V + D+++ + L G Sbjct: 697 KLEKVKPLAIYPGSERDWTFTIKTSVPFAEIIKAIHEQKSDLLENVLLLDIYRSEKLTVG 756 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +++ ++ + + T + + R+ V +K Sbjct: 757 HQNMTLRFIYRDFSKTIAQEVVENEHQRLKTAVSQK 792 >gi|117928471|ref|YP_873022.1| phenylalanyl-tRNA synthetase subunit beta [Acidothermus cellulolyticus 11B] gi|117648934|gb|ABK53036.1| phenylalanyl-tRNA synthetase beta subunit [Acidothermus cellulolyticus 11B] Length = 824 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 252/854 (29%), Positives = 405/854 (47%), Gaps = 80/854 (9%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 M+ +SWL +++D S +I D L IGLEVE V+ A P I +V+ ++ Sbjct: 1 MRVPVSWLGEYVDLPPGASGRRIADALLRIGLEVEAVEPLGADLAGPLVIGQVVGIDEFV 60 Query: 57 DLDCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + +R +D G+ ++CGA N RVG + A PG+ +P + RK G Sbjct: 61 ASNRKTIRYCQVDVGEAGTRGIICGAQNFRVGDKVIVALPGAVLP-GGFAIEARKAYGHL 119 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL + DD I+ + DAPVG + L+L D ++D++++P+R C+ VRG Sbjct: 120 SDGMICSARELRIGDDHTGIVVVDPDAPVGVDAAKALDLRDDVLDIAVSPDRGYCLSVRG 179 Query: 174 IALDLVAA---GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 +A +L A G E+ + P + P+ I +D + C F V + Sbjct: 180 VARELAVALDTGFRDPAEVQLP-PGAGTGRPVRI----EDPAGCDRFVAWTVTSINAAAR 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P MR+RL A G+R IS VD+TNYV L+ G P H +DA+++ + VRRA SGE++ Sbjct: 235 TPFVMRRRLWACGMRPISLAVDVTNYVMLELGQPLHAYDATKLRGPIGVRRARSGERLTT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + L P +++I D +AG +GG D +TDV++E A +D +++AR + Sbjct: 295 LDTVDRTLDPGDLLIVDDSGPIGLAGTMGGATTEIDATSTDVVLEAAHFDAVSVARMARR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + T++ RFERGVD Q + PV + +L+ GG P I Sbjct: 355 HKLATEASRRFERGVDPQ-LPPVAAARAADLLARHGGARIGAVTDVGAPAAPAVITIPAD 413 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 R++G+D +R LE++G V + +V PSWR D+ + DL EE++R+ G Sbjct: 414 HPDRVAGLDYGPAVVVRRLEQIGCQVRAAGGRLDVVPPSWRPDLTDPNDLAEEVIRLEGY 473 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-- 527 D++ S LP V R L+ +Q R R + RVLA+R +EV+++ F++ + FG Sbjct: 474 DRLPSV-LPRAPV--GRGLTEEQRRRRLIGRVLAARGYVEVLSYPFMAADIPDRFGLPAA 530 Query: 528 ---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 +R + + NP+ +RT+LLPGL RN+ R AD A+FE+ V+ +P GQ Sbjct: 531 DLRRRAVRLANPLDEGEPLLRTTLLPGLFAVARRNLSRGAADLALFEIGVVFLG-SPTGQ 589 Query: 585 -KYMAAGIRKGSS-----------------------------GIEGSGRL--WSDKSEER 612 + G+ + + G G+GR W+D Sbjct: 590 LRAPRPGVDRRPTEEELAALDAALPEQPLHLAVVLVGAMERRGWWGTGRPAGWADA---- 645 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 ++ A +L V +LR + + +HPGR + +G+ GE HP Sbjct: 646 ---IEAMREVAGSLGV--------ALRVAASDMAPWHPGRCAALAVGDGQPIGFAGELHP 694 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 +L L C E+ + ++ + Q V+ S PV +V Sbjct: 695 RVLAALELPPRTCAAEINVTAL-LRQAGGPVQAPVI---STFPVANLDVAVVVDAGVPAA 750 Query: 733 LVN--IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 V + L++++ +FDV+ G LG G+KS+A + + T D++ L D Sbjct: 751 EVEAALRTGAGPLLEEIRLFDVYSGPQLGAGRKSLAYTLRFRAPDRTLETDEVIALRDAA 810 Query: 791 VENVVKKTNAVLRS 804 V ++ AVLR Sbjct: 811 VAEAARRVGAVLRG 824 >gi|307288579|ref|ZP_07568563.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|306500486|gb|EFM69819.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0109] gi|315165527|gb|EFU09544.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1302] Length = 807 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 230/832 (27%), Positives = 418/832 (50%), Gaps = 54/832 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPN++ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNIKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLG-------KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 RG+A ++ A KLKE +S+++ + ++DS + + +K Sbjct: 180 RGVAYEVGAIYRQTPQFNDPKLKED------ASDNVENYVTVTVEDSQDAPAYQIRVIKD 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + Sbjct: 234 VTIAESPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATA 293 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 E+++ LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I Sbjct: 294 AEELITLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSI 353 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPR 402 ++ K + ++S RFE+G++ + ++I L GT S I + K Sbjct: 354 RKTSKQFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAIGSEVAVKEA 413 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 ++ + + G + I E LGF+ +E+++P R D+ +AD++EE Sbjct: 414 QVAVTLERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEE 473 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + RIYG D + S LP + +L+ Q TR +K +L E ++++ ++E+S Sbjct: 474 VARIYGYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSR 531 Query: 523 LFGGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----- 576 F + + L P+S + S +R +L+ GLL NV R + A +EV V+ Sbjct: 532 QFMMKESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTED 591 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + P + ++A + +G + + VD + K S++ Sbjct: 592 PTKNLPTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLT 642 Query: 636 DSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + ++ + A HPGR+ I E+V G+ G+ HP + + E Y+ + Sbjct: 643 EKISYQATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAEL 695 Query: 695 PISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 + Q T+ V + +S V RD+A +VD+ + LV I N + + ++ +FD Sbjct: 696 NLQQLVATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFD 755 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+QG+ LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 756 VYQGEKLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|308235808|ref|ZP_07666545.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis ATCC 14018] Length = 874 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 254/886 (28%), Positives = 422/886 (47%), Gaps = 105/886 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVRVGLEEEEIHDSQVTGPIVVGYVVDATPEPQKNGKI 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G K+ E+ ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDKYNEVDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL--------PIDA-PVGGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L DA G L L+ P+++++ Sbjct: 125 YGHISNGMCASERELGLGDSHDGIILLREYGFSKAEYDALKPGDDAMSLLHLNKPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSL 213 +TP+R RG+A + A + E+N S+ +I+ ++D++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGATYTDPVIELNNKADQVVSMSDGASKDIEVSIEDNNP 244 Query: 214 CKGFAMC---CVKGVRN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G C + VRN + +PNWMR+RL G+R IS VD+TNYV LD G P H Sbjct: 245 IHGVVGCDRYYARVVRNFNPDSSSPNWMRRRLTRAGMRGISLAVDVTNYVMLDLGQPLHA 304 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGIIGGK 320 +D +I + VRRA +GE++ LD ++ +L+ ++++I R+ +AG++GG Sbjct: 305 YDLDKIEGPIVVRRAKAGERLTTLDGKDRELNVEDLLICDSPKGNHGSRVLGLAGVMGGM 364 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + T ++LVE A +DP++IAR+ + + T++ RFERGVD + V+++ Sbjct: 365 YGEVTSETKNILVEAAHFDPVSIARTARRHKLPTEASRRFERGVDTALQPAAAQMAVTML 424 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G S+ N T IVF SEV+R+SG+ + + IL +G SV G + Sbjct: 425 SDFGSGEPSNTPTDVNNTVDRSVIVFKASEVERVSGLSIDLNRISDILTDIGCSVAGGGN 484 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 F V P+WR D+ E DLVEEI R+ G D+I + +P V K L+ Q+ R + Sbjct: 485 GSFSVLPPTWRPDLNEPCDLVEEIARLVGYDEIPVK-VPAVPVTGKTGLTQDQATRRAIA 543 Query: 500 RVLASRAMMEVVNWSFISKEQSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLK 554 LA ++E +++ F+ +E F + ++I NP++ D +R ++L L Sbjct: 544 YELAEMGLIESLSYPFVGQEDFKAFREDVDSVAKVSVKIANPLAGDRPWLRRNVLTTLAG 603 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDT--------------------------PEGQKYMA 588 RN+ R ++D +++E+ HVY D PE ++A Sbjct: 604 TVRRNIRRGLSDVSLYELGHVYFADPNAPAIPALPGSVRPTDAQLAALDAGLPEQPLHVA 663 Query: 589 AGIRKGS--SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES-G 643 A + + +G G+ R WSD E R V+ D + S Sbjct: 664 ALLTGNAEETGWLGTHREVDWSDAVEAVNRLGKRIG------------VAFDVRQINSDD 711 Query: 644 APSWYHPGRSG----IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQ 698 P+ +HPGR+ + + ++ +G GE HP + + GL FE+ L ++ Q Sbjct: 712 VPASWHPGRTAKVYIPVDGADDVEIGIVGELHPQVDENLGLPKHSAAFELDLSALFDAMQ 771 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKS 757 K + K V S+ PVK+D AF+ + A L I+K L++ V +FDV++G+ Sbjct: 772 VKPVQAKPV---STFPPVKQDFAFVAPSSLTAHDLKEAIVKASGDLLESVELFDVYEGEQ 828 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGEG +S+A V + T DD+ + + I ++ +K +A LR Sbjct: 829 LGEGLRSLAYSVTFRAADRTLSSDDMEAVREAITKS-AQKLHATLR 873 >gi|227551331|ref|ZP_03981380.1| phenylalanine--tRNA ligase [Enterococcus faecium TX1330] gi|257896048|ref|ZP_05675701.1| phenylalanyl-tRNA synthetase [Enterococcus faecium Com12] gi|227179542|gb|EEI60514.1| phenylalanine--tRNA ligase [Enterococcus faecium TX1330] gi|257832613|gb|EEV59034.1| phenylalanyl-tRNA synthetase [Enterococcus faecium Com12] Length = 806 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 228/822 (27%), Positives = 422/822 (51%), Gaps = 35/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL +LD ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYLDLSNVTPKELADKMSVTGIEVEGITVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFSYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A + SS+ +I+ ++D + + + ++GVR +P Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSQLASDKIQVTVEDKEVVPAYQIRIIEGVRIQPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R I+ +VD+TNY+ L G P H FD ++ S+ + VR A E ++ L Sbjct: 240 QWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSNEILVRHAKENETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R+ K Sbjct: 300 DGESRKLTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRRTAKQF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 360 NLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G + +++ I E LGF + + V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINQYLGTSLVVKEVNEIFEALGFGYEEKDHVYSVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F + Sbjct: 480 DQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVIKES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END + + Sbjct: 538 NITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP---RAH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + ++ + I G +W +K + + + VD F K ++ E + + +++ Sbjct: 595 LPQEVKHAAIAISG---VWEEKDWQTKAQNVDFFTIKGLLENLFEQLGIHEDIHYQTVTE 651 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 652 IKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAAQ 704 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K +V ++ V RD+A +V + + L +I + R + D+ +FDV+QG+++ +G Sbjct: 705 KGIVFKAVTKFPAVSRDIALLVKETVTNQELTEVIDSAAGRFLTDIQLFDVYQGENIEKG 764 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T D++I MD++ + + + A +R Sbjct: 765 HKSMAYSLTFVNPEATLTDEEINKAMDKVTKALTETLGASIR 806 >gi|282878659|ref|ZP_06287428.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella buccalis ATCC 35310] gi|281299204|gb|EFA91604.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella buccalis ATCC 35310] Length = 820 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 256/841 (30%), Positives = 420/841 (49%), Gaps = 59/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV---EKVDN-REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ +++ LTS GLEV E+V N + L I +VL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQEVAQALTSTGLEVDALEEVQNVKGGLKGLYIGQVLTCEMHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI---PENNMIVNVRKIRGI 112 + D I +D GK + Q+VCGAPNV G + A G CI +++ + K+RG+ Sbjct: 61 NSDHLHITTVDLGKGKPQQIVCGAPNVAAGQKVIVADLG-CILYDGDDSFTIKKSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 +S GM+C+E E+ + I+ LP DAPVG ++Y L SD II++ +T NRSD + Sbjct: 120 DSFGMICAEDEIGVGTSHEGIIVLPEDAPVGQPAAEYYNLESDWIIEIDITANRSDALSH 179 Query: 172 RGIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A DL A + ++ P + +E +P+++K ++++ CK +A + Sbjct: 180 YGVARDLYAWLKQNGYQTSLHRPSCEDFKVDNEDLPIDVK--IENTEACKRYACLSLTDC 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 +P W++ +LK +GLR ++ +VDITNYV + G P H FDA + + VR G Sbjct: 238 EVKESPEWLQNKLKVIGLRPVNNIVDITNYVMMAYGQPMHCFDADMVEGHQIVVRTQPEG 297 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K + LD +E+ L ++ I + IAGI GGK +G + T +V++E A + P I Sbjct: 298 TKFVTLDGEEHTLGEHDLSICNAEHPMCIAGIFGGKGSGTYETTRNVVLESAYFHPTWIR 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRK 403 +S + G+ TD+ YRFERG+D G I LK L L GG S I + Sbjct: 358 KSARRHGLSTDASYRFERGIDPNGTIYALKQAAILCQQLAGGKVSMQIKDVYPTPIENAH 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 + V L G ++ + IL+ L + E + ++SVP++R DV+ D+VE+ Sbjct: 418 VSLSYDYVNGLIGKEIEPDVIKSILDSLEMEIKSENPQGLDLSVPAYRVDVQRPCDVVED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILRIYG + ++ +P TQ++ + + R +++ ++ + E++N S Sbjct: 478 ILRIYGYNNVE---IP-TQLKSSLAIQGDEDRAAHLENLVGEQLVGCGFHEILNNSLTKT 533 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E ++I+NP+S D+ MR +LL G L++ RNV+R + FE + Y Sbjct: 534 SYYHDLNRYPEEATVKIMNPLSTDLGVMRQTLLFGGLESIMRNVNRKQTNLRFFEFGNCY 593 Query: 577 ------ENDTPEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 EN+ + Y A G+ +EGS W+ ++E F +L KA + Sbjct: 594 QYVAERENEEDPIKAYQQAYHLGLWVTGKRVEGS---WA-HADEPSSFDEL---KAYVQN 646 Query: 628 VIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 + V L E + + G S I ++ G +L +S Sbjct: 647 IFARLGVPSGMLVTEKSDNNIFSHGLS--IMNRGGKIIAELGVVCKKLLKQVDVSG---- 700 Query: 687 FEVYLDSIPISQ-KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDR 742 EVY I + K T+ KV + LS V RDLA ++D+ + I + + Sbjct: 701 -EVYFAEINWTALMKLTRKNKVEYKELSKYPAVSRDLALLIDKQTEFEQIEKIAFQTEKK 759 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ V +FDV++GK+L EGKKS A+ ++Q + T D I +M ++++N+ +K A L Sbjct: 760 LLKRVELFDVYEGKNLPEGKKSYAVNFILQDEQKTLNDKQIDGIMQKLIKNLTEKLGAEL 819 Query: 803 R 803 R Sbjct: 820 R 820 >gi|229550390|ref|ZP_04439115.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis ATCC 29200] gi|229304512|gb|EEN70508.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis ATCC 29200] Length = 807 Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 418/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + S+AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVSLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|325689936|gb|EGD31940.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK115] Length = 801 Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 428/824 (51%), Gaps = 44/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVHFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG +T V++E A++D +I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGAATEISGQSTRVVLEAAVFDGKSIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++ Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVTSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGSAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFTLKP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEDL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 I + + G L ++K + + VD F AK V+E + L E A + Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFTKLGLTAEYAASN 645 Query: 647 W---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--QKKR 701 HPGR+ +I + + V G+ G+ H + + E Y+ + +S +++ Sbjct: 646 QIKSLHPGRTALISINGQTV-GFVGQVHLATAKAYDIP------ETYVAELNLSAIKEQL 698 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G LG Sbjct: 699 EPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGDKLG 757 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 758 VGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|320531690|ref|ZP_08032630.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] gi|320136110|gb|EFW28118.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces sp. oral taxon 171 str. F0337] Length = 885 Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 258/900 (28%), Positives = 415/900 (46%), Gaps = 120/900 (13%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+D T +S E++ L +GLE E++ P + KVL+ E + + Sbjct: 6 IEWLREHVDVPTGLSAEQLAADLVRVGLEEERIVPPAVTGPLVVGKVLTREAKEQSNGKV 65 Query: 63 L---RIDTG-KHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + R+D G +H + +VCGA N VG V PG+ +P + + Sbjct: 66 INYCRVDVGPEHNDAPGTGKEPSDLPSRGIVCGAHNFDVGDYVVVCLPGAVLP-GDFCIA 124 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPI----------DAPVGGRLS-DYLELSD 154 RK G S GM+CS +EL + +D + I+ L + P G + L L + Sbjct: 125 ARKTYGHVSDGMICSARELGIGEDHSGIIVLQQWLAEHGHEGEEPPAPGTDAIGILGLGE 184 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE----INISCPLSSESIPLEIKFDL-- 208 ++++++TP+R C +RG+A + + + + N + + E FD+ Sbjct: 185 EVLEINVTPDRGYCFSMRGVAREYSHSTGARFTDPADATNTGLYPNGVAPAGEGGFDVVV 244 Query: 209 -DDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 +D G C V+G+ N +P WM+ RL A G+R IS VD+TNYV LD Sbjct: 245 PEDPRPIHGRPGCDRYVARLVRGIDPNAPSPAWMQDRLTAAGMRPISLAVDVTNYVMLDL 304 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GRIQSIAG 315 G P H FDA +++ + VRRA GE++ LD+ L P+++VIA R +AG Sbjct: 305 GQPLHAFDAGKLAAPIVVRRAKDGERLTFLDDVTRTLDPEDLVIADSPEGEGSRALVLAG 364 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 + GG + D +T DVL+E A +DP+++ARS + + T+S R ERGVD + + Sbjct: 365 VFGGALSEVDADTRDVLIEAAHFDPVSVARSSRRHKLPTESSKRNERGVDTELAPIAAQR 424 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 V L++ GGTA + N T P I +RL+G+ E +L +G +V Sbjct: 425 AVDLLVEYGGGTAEPVATDINRTQAPEPITMRADAAERLTGVAYGTERVTELLTTIGCTV 484 Query: 436 --IGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS 489 G D V+ P+WR D+ A L EEI R+ G D I P+ + LS Sbjct: 485 ERSGSADDGTVLLTVTPPTWRPDLVGPAHLAEEIARLDGYDAI---PVIVPAAPAGTGLS 541 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG----QRELEILNPISADMSNMR 545 Q R V R LA + +V+++ FI +L ++ + + NP++ D +R Sbjct: 542 ADQRARRDVVRALADDGLTQVLSYPFIGDIHDLLEIPADDVRRQTVRLANPLAEDAPYLR 601 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--------------NDTPEGQKYMAAGI 591 TS+L L+ RNV R + D A+FEV V T + + AGI Sbjct: 602 TSVLDSLVDVARRNVSRGLTDVAVFEVGSVTHPAGTVPAPIPGTAGRPTDSEETALEAGI 661 Query: 592 -------------RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + G+ G+GR W ADA+ V+ S + Sbjct: 662 PAQPTHVGAVMTGERERGGVLGAGRPWD---------------WADAVDVVRTVASTLGV 706 Query: 639 RFESGAP----SWYHPGRSGIIKTSA-----EI----VLGYFGEFHPNILDFFGLSNPIC 685 E AP + +HPGR+ I+ EI ++ + GE HP ++ GL C Sbjct: 707 EIEVSAPERPCAPWHPGRTAEIRLPGRRRGKEIEPGRLVAHAGELHPRVVRTLGLPERAC 766 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLI 744 E+ LD + + + T +V +S+ K D+A +VD+ A + +++ L Sbjct: 767 AVEIDLDPL-LETVRSTGALQVKTISTFPAAKEDIALVVDESTTAAEVEALVRQAAGDLA 825 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++V +FDVF+G LGEGKKS+A+ ++++ T ++ + R+V+ K A LRS Sbjct: 826 EEVRLFDVFRGPQLGEGKKSLAVSLVLRAPDRTLTAEETAAVRKRVVKRAAKVLGAELRS 885 >gi|148269250|ref|YP_001243710.1| phenylalanyl-tRNA synthetase subunit beta [Thermotoga petrophila RKU-1] gi|147734794|gb|ABQ46134.1| phenylalanyl-tRNA synthetase beta subunit [Thermotoga petrophila RKU-1] Length = 788 Score = 323 bits (828), Expect = 8e-86, Method: Compositional matrix adjust. Identities = 239/822 (29%), Positives = 410/822 (49%), Gaps = 66/822 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT----IVKVLSVER-- 54 M+ SWL++ +D D +E+I + LT G VE + L PF I+ +ER Sbjct: 1 MRVPESWLREFVDLDWDIEQIAERLTFSGTSVEDI-----LRPFNVSGEIITARVIERFD 55 Query: 55 NPDLDCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P + I+ ++DTGK V+ V G + A G+ + N + + R+ +G+ Sbjct: 56 HPASEKLIVCKVDTGKRI-YTVITADKTVNEGDYVILALEGATL-NNGLKIEPREFKGVI 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CS +EL L + S + P +G + + L++ ++D+ +TPNR DC+ + G Sbjct: 114 SEGMLCSLEELGLEEKSDRVYRFPDPVELGVNVVEEYGLNERVLDIEITPNRPDCLSIIG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A +L A L + E + ++ +++D C ++ +KGV +P W Sbjct: 174 VARELSALSGRPLNKPQPDVSFVDEDVQFDV--EIEDVEGCPRYSARIMKGVTVKDSPLW 231 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 M+ RL A G+RS++ +VD TNYV ++ G+P H FD +R+ + ++ V+ A GE++L LD Sbjct: 232 MKARLVAAGVRSLNNVVDATNYVMIELGHPVHAFDLNRLKNKIIVVKSAKGGERVLLLDE 291 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L ++I + ++ GI+GG +G D+T D+++EVA +DP+ I ++ K LGI Sbjct: 292 KEYKLKGGEILITDGENVLALGGIMGGMESGVYDDTRDLVLEVAYFDPVRIRKASKALGI 351 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-----VFM 407 ++S YRFERGVD + V + LI L GG + + PRKI + Sbjct: 352 SSESSYRFERGVDPNDVELVSLRLAELIQKLAGGH----VLGKFWDVYPRKIESKKVMLR 407 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + ++++ G V E+ IL+RL F V D +EV VP++R DVE + DL+EEI RIY Sbjct: 408 KARIEKILGTKV--EEPGNILKRLEFQVEDRGDSYEVLVPTFRPDVEREIDLIEEIGRIY 465 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-G 526 G ++++S+ + + + R +Q R + + + EVV +SF+ ++ + Sbjct: 466 GYEKVESKVISVPAI--NRGWDEKQLFRREISQFMKGMGFDEVVTFSFVDSQKVKRWPLV 523 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G+ + + NPI +DM MRTS L++ N R D +FE+ VY + G Sbjct: 524 GREPITLSNPIVSDMDVMRTSQFYSLIQVLAENFKRQNRDLKLFEIGKVYFKEN--GNFM 581 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + S G+E G ++DK R V + K LD L F G Sbjct: 582 EIETLSAMSCGLENPGD-YTDK-----RNVSFYTTKG----------ILDELFFRFGVNV 625 Query: 647 WYH--------PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 Y P RS I + G+ G P +LD + + FE+ ++ + Sbjct: 626 EYRVAEIPGLFPTRSARIYVENREI-GFIGMVDPKLLDEYDVKEDTYFFEIDMELLRECA 684 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 KR + + V+RD++F++ + + ++ + K L+++V VFDV++G+ Sbjct: 685 SKRPAYRPTPKFPA---VRRDISFLLPKGFESVKIIELFKKSGGDLVEEVGVFDVYEGRG 741 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + E SV V+ + + T D+++ +RI E +V+KT Sbjct: 742 IPEDMVSVTFYVVFRHPERTLTDEEV----NRIFEEMVQKTE 779 >gi|315028073|gb|EFT40005.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2137] Length = 807 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 230/832 (27%), Positives = 418/832 (50%), Gaps = 54/832 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLG-------KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 RG+A ++ A KLKE +S+++ + ++DS + + +K Sbjct: 180 RGVAYEVGAIYRQTPQFNDPKLKED------ASDNVGNYVTVTVEDSQDAPAYQIRVIKD 233 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + Sbjct: 234 VTIAESPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATA 293 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 E+++ LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I Sbjct: 294 AEELITLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSI 353 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPR 402 ++ K + ++S RFE+G++ + ++I L GT S + + K Sbjct: 354 RKTSKQFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEA 413 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 ++ + + G + I E LGF+ +E+++P R D+ +AD++EE Sbjct: 414 QVAVTLERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEE 473 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + RIYG D + S LP + +L+ Q TR +K +L E ++++ ++E+S Sbjct: 474 VARIYGYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSR 531 Query: 523 LFGGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----- 576 F + + L P+S + S +R +L+ GLL NV R + A +EV V+ Sbjct: 532 QFMMKESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTED 591 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + P + ++A + +G + + VD + K S++ Sbjct: 592 PTKNLPTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLT 642 Query: 636 DSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + ++ + A HPGR+ I E+V G+ G+ HP + + E Y+ + Sbjct: 643 EKISYQATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAEL 695 Query: 695 PISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 + Q T+ V + +S V RD+A +VD+ + LV I N + + ++ +FD Sbjct: 696 NLQQLVATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFD 755 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+QG+ LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 756 VYQGEKLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|323140835|ref|ZP_08075749.1| phenylalanine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] gi|322414685|gb|EFY05490.1| phenylalanine--tRNA ligase, beta subunit [Phascolarctobacterium sp. YIT 12067] Length = 817 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 245/845 (28%), Positives = 415/845 (49%), Gaps = 71/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK ++D ++S+ ++CD +T +GLEV+ V + L KV+ + R+PD D Sbjct: 1 MLASLEWLKQYVDINISVAELCDKITRVGLEVDTVTQLGKGLEGVITGKVMEIHRHPDSD 60 Query: 60 -CAILRIDTGKHQE-IQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + +D G+ E +Q++ GA NV V ++G PP P+ + + K+RG Sbjct: 61 HLWVCMLDYGQGGEPVQILTGAQNVHQYDIVPVAVVGSVLPPSERNPQG-LKLKKAKMRG 119 Query: 112 IESTGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 ++S GM+CS E +L+L + I LP + P+G + L L D +ID+ LT NR Sbjct: 120 LDSFGMLCSADELGIESKLLLPEQRNGIFILPENTPIGVDIKTVLGLDDTVIDIDLTSNR 179 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE----------IKFDLDDSSLCK 215 +DC + G+A ++ A CPL ++ ++ + +D LC Sbjct: 180 ADCFSIIGLAREISAI---------TGCPLKMPAMDVKEAAAGKASDYVNVKIDAPELCS 230 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-D 274 FA +K ++ +P WM++RL+A G+R IS +VD+TNYV L+ G P H +DA +++ Sbjct: 231 RFATRVLKDIKIMPSPEWMQRRLRACGVRPISNVVDVTNYVMLELGQPMHAYDADKVAGH 290 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 L VRRA GEK++ LD +E +L+ + I + + G++GG D T +V++E Sbjct: 291 TLIVRRAEEGEKLVTLDGRERELTSAMITIGDAEKAAGLGGVMGGLLTEVTDETKNVILE 350 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICI 393 A + +I R+ + LG+ +++ RFERGVD L L+ + T S I Sbjct: 351 AASFHGPSIRRTSRALGLRSEASGRFERGVDTIRDHDALNRAAHLLEQMGACETFSGIVE 410 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 A KP I +++ G+++ ++ + IL +LGF V + + ++ P+WR+D+ Sbjct: 411 AYPEELKPAVITTTAAKINGRIGVNIAEDEMVAILSKLGFGVEAKDGELLITAPTWRRDI 470 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 + AD+ EEI R++G D I+S LT + + S+ V+ + + E++ + Sbjct: 471 DCDADISEEIARMHGYDFIESHQPELTITQGSQ--SVLDDVKDDVQDYMVGAGLSEMMTY 528 Query: 514 SFI---SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 SFI + ++ +L R +E+LNPI+ S MRT+++P L+ N+ + A Sbjct: 529 SFIKANAYDKMLLPADDARRNCIELLNPITDAFSVMRTTMVPSALQTASFNLRNHNSSVA 588 Query: 569 IFEVSHVY-------ENDTPEGQKYMA--AGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 +FE+ ++ D E Q A +G RK + W D VD + Sbjct: 589 LFEIGRIFLPKALPLTEDPAERQLLTAVLSGSRKALN--------WCDDKGS----VDFY 636 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 D K ++E D S P + HPG+S I + E V+G FGE HP + + F Sbjct: 637 DMKGIVEGLLEAMQVSDYTMTRSQQP-YLHPGKSCDIVVNGE-VIGSFGEVHPVVQENFE 694 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK- 738 L E+ ++ + S T + HL + RD+A +V + L +I+ Sbjct: 695 LDQVTYVLEMAVEPLVASA---TAVPQYKHLPKFPSMSRDIAVVVPAEVTNAELEQVIRA 751 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + L+ V VFD++ GK + G KS+A + Q T D ++ M +++ V + Sbjct: 752 HAGELLQGVRVFDIYTGKQVAAGCKSMAFNLTYQAADRTLTDAEVDASMKKVIAEVAEAY 811 Query: 799 NAVLR 803 A LR Sbjct: 812 KAKLR 816 >gi|46446003|ref|YP_007368.1| putative phenylalanine-tRNA ligase beta chain [Candidatus Protochlamydia amoebophila UWE25] gi|46399644|emb|CAF23093.1| putative phenylalanine-tRNA ligase beta chain [Candidatus Protochlamydia amoebophila UWE25] Length = 802 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 237/816 (29%), Positives = 403/816 (49%), Gaps = 43/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ LSWLK+++D ++ +I LT GLEV+ + + S + VL VE++P+ D Sbjct: 4 MRIPLSWLKEYIDLNLEPVEIAKILTMAGLEVDGYEEIGKGFSGVIVGDVLEVEKHPNAD 63 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTGM 117 ++ + + + QVVCGA N R GL +AP G+ + + ++K +RGIES GM Sbjct: 64 KLLIALVSDGKEIHQVVCGASNCRKGLKTAFAPVGASLIDEGKEFKIKKGKLRGIESNGM 123 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS KEL +S++ IMEL G L+ SD I ++SLTPN C + G+A + Sbjct: 124 LCSAKELQISNEDDGIMELSEHLQAGTALNTLY--SDTIFEISLTPNLGHCASIVGVARE 181 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L AA L+ ++ I + D++ C + +K V+ +P+W++ + Sbjct: 182 LSAATSHPLRYPHLVFKEEGNLINNSLTLDIEAKEACSRYTCRVIKNVKVGASPDWLKAK 241 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 ++ GLRS++ +VD+TNYV L+ G+P H FD + + VR A GE LD +E Sbjct: 242 IEKSGLRSVNNIVDVTNYVLLEMGHPLHAFDYDLVKGKKIVVRMAQEGEIFETLDGKERI 301 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L ++VIA + +IAG++GG+++ + TT++++E A +DPI + ++ K LG+ TD+ Sbjct: 302 LKDSHLVIADSEKPIAIAGVMGGRNSEVSEKTTNIILESAFFDPIFVRKTSKQLGLQTDA 361 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNSEVKRLS 415 RFERG D +I VL LI + GG D I + + I S + ++ Sbjct: 362 SKRFERGTDPNQLISVLNRAAMLIQMVAGGIIEDSILDEQTKDFLELTIRCRLSRINQIL 421 Query: 416 GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G + + I + LGF + D F V VP++R DV+E+ DL+EE+ RIYG D I Sbjct: 422 GTTLSRGEVETIFQSLGFHYQWDGQDSFMVCVPTYRTDVKEEIDLIEEVARIYGYDHIPR 481 Query: 475 E------------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 P+ L + E + L + + ++ L ++ VV + E V Sbjct: 482 NGGRYQTSKLPDAPIYLFEKEIQSYL-IAEGLQEFITCDLIGPTLVNVVQNLSMPAEAIV 540 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 ++LNP S + S +RTSLLPGLL+ N+D FE+ ++ D Sbjct: 541 ---------KVLNPTSIEQSILRTSLLPGLLQVVKYNLDHQNHQINGFEIGRIHFKD--- 588 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G +Y + GI SG EE+ R D +D K ++++ + ++ +F++ Sbjct: 589 GDQYQEQSV----VGILLSGFSQPYHFEEKKREYDFYDLKGIIENLLKE-LGIEKPQFKN 643 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +H GR + E+ +G FGE HP+I +S I E L + + T Sbjct: 644 LDLKTFHSGRQASLFVD-ELEVGSFGEVHPSIQRRLDVSQRILFGEFNLHDL---MQVAT 699 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 K +KV L+ +RD F + +P ++ I + L+++V + D+++ + L G Sbjct: 700 KLEKVKPLAIYPGSERDWTFTIKTSVPFAEIIKAIHEQKSDLLENVLLLDIYRSEKLTVG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +++ ++ + + T + + R+ V +K Sbjct: 760 HQNMTLRFIYRDFSKTIAQEVVENEHQRLKTAVSQK 795 >gi|301301226|ref|ZP_07207382.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] gi|300851225|gb|EFK78953.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus salivarius ACS-116-V-Col5a] Length = 805 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 240/826 (29%), Positives = 423/826 (51%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL D++ D +++E++ + + +EV++ E L + K L V ++PD Sbjct: 1 MKVSTKWLNDYVKVDDLAVEELAEKIERTAVEVDETYRLEEGLKKIVVGKTLEVVKHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ++CGAPN+ + A G+ I N+ + K+RG S GM Sbjct: 61 DHLNICQVDVGEDEPIQIICGAPNIAANQKVIVALSGARIA-GNVKIKRGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +E+ S+ + I LP A G + +YL + + IIDV +TPNR D + + Sbjct: 120 ICALQEIGFSESVVPKEYADGIYVLPESAVPGEPVYNYLGMDEDIIDVDVTPNRGDMLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 RG+A D VAA G+ E+ + +E L I+ L D L + + + V Sbjct: 180 RGVARD-VAAVYGR--ELTLPMGTVNEDDGLHIEDYLTVKADKELAPAYKLRVIDNVTVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TNY+ +D G P H FD ++I S L VR A GEKI Sbjct: 237 PSPMWVQKRLWNAGVRPINNVVDVTNYILMDYGQPLHAFDYNKINSKELVVRLAKQGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE +L ++VI + ++AG++GG + DDNTT V++E A++D +I ++ Sbjct: 297 TTLDDQERELQSGDIVITNGKDPIALAGVMGGVNTEVDDNTTTVVLESAMFDSSSIRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVF 406 + + +++ RFERG++ + L + +LI L G A+ I ++I + + Sbjct: 357 RRENLHSEASMRFERGINRGTIEEALDYAANLIAELGDGKVATGIAQEQDIDVQDTTVEI 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ + G D+ + D I ERLGF V +F V+VP +R D+ ADL+EE+ RI Sbjct: 417 SLEKINNVLGTDLSVADVTDIFERLGFKVEENAGEFVVNVPPFRWDISIPADLIEEVARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KEQSVLF 524 YG D I + LP+ + + +Q R + +L + + + +++ + K + F Sbjct: 477 YGYDNIPA-TLPVGPTT-PGHYTYEQQVIRNTRAILEASGLTQAISYGLTTKVKAERFAF 534 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + E+ P+S+D + +R +L+ GLL N R + + A++E V+ +++ Sbjct: 535 EPAMKSTELDFPMSSDHTTVRMNLISGLLDDVSYNKARKVENVALYEQGRVFFRDEDSER 594 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +++AA + + IE + W DK R VD + K ++++ + + Sbjct: 595 PREVEHVAAAM---TGLIEDA--TWHDKK----RPVDFYVIKGIVQNLLDKVGVGSRVVY 645 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + A HPGR+ I E + G+ GE HP + + L + FE+ L + Sbjct: 646 TATAEHEEMHPGRTANIYIDGEFI-GFVGEVHPTLAKEYNLDR-VYVFELDLQKV----M 699 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + +K +V S P +KRD+A +V + I ++ IK N + V +FDV+ G+ Sbjct: 700 ELSKDPEVYEPVSKFPAIKRDIALLVAEDIQNSDIIKTIKENGGANLVSVNIFDVYAGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G KS+A + + + T DD++ D++V + + AV+R Sbjct: 760 IDLGFKSLAYTLTFENKERTLTDDEVNKAFDKVVNKLQENYKAVIR 805 >gi|323464761|gb|ADX76914.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus pseudintermedius ED99] Length = 801 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 236/821 (28%), Positives = 412/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL+ ++D DVS+E + + +T G+EV+ + D + + + V + ++PD D Sbjct: 1 MLISKEWLETYVDLDVSIEALAERITRTGIEVDDIQDFTKEIKNLVVGYVEEIAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVNIGEETPVQIVCGAPNVGAGQTVIVAKVGGRLP-GGIKIKRAKLRGQVSEGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ L + I + G L L D +++ LTPNRSD + + Sbjct: 120 CSLQEIGLPSNVVPKKFEDGIYQFATAIEPGTDALKALYLDDQMMEFDLTPNRSDALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A + A ++++ + ++ + ++D++ ++ V+ V+ +P Sbjct: 180 GTAYEAAALYDKQVRKPETTVTAQPKAAHETLTVKVEDTTQVPYYSARVVENVQIAPSPE 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S+ + VR A EK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVMLEYGQPLHMFDKDHIGSNDIVVRLAHENEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +QE +L ++VI + + ++ G++GG + T +V+VE A+++P+ I + + L Sbjct: 300 DQERELLSSDIVITNGQQPIALGGVMGGDFSEVTPETKNVIVEGAIFNPVAIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ +L G D + ++ I + Sbjct: 360 LRSESSSRFEKGIATEFLDEAVDRACFLLETLAQGQVLDGRVTDGDLGALVTDITITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G D+ D +R+ E+LGF+ + V VPS R+D+ +ADL+EEI RIYG D Sbjct: 420 VNRTVGFDLTEADIVRVFEQLGFNTEITNNDIHVKVPSRRRDITIEADLIEEIARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS-VLFGGGQR 529 I S LP+ + L+ +Q +TR VKR L + + + +S + +E++ + Sbjct: 480 NIPS-TLPVFEDVTSGALTDRQRKTRVVKRTLEGAGLSQAITYSLVDRERATAFTTTTHQ 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT-PEGQK 585 +E+L P+S S +R SL+P L+ AT NV R D A++E+ +V+ E T PE + Sbjct: 539 TVELLMPMSEAHSTLRQSLIPHLIDATQYNVARKNQDIALYEIGNVFFGQEGQTLPEQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G E W K E VD + K ++E +LRFE Sbjct: 599 YL-SGIMTG----EYVSNPWQGKKE----VVDFYLVKG----IVERIADQLALRFEYEIT 645 Query: 646 S--WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ + + E +G+ GE HP + + L FE+ + I ++ Sbjct: 646 QIDGLHPGRTAAVTLNGE-AIGFIGELHPTVAKTYDLGRTYV-FELNYEKI---MQQSVG 700 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + V RD+A +V + A +L++ I +N ++ D VFDV++G+ + GK Sbjct: 701 YINYQPIPKFPGVTRDIALVVASEVRAASLIHTIHQNGGAILKDAHVFDVYEGEHMEVGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KSVAI++ +T ++ + + I+ V++ A LR Sbjct: 761 KSVAIRLTYLDENNTLTEEQVTKVHQAILA-VLEAQGATLR 800 >gi|297583680|ref|YP_003699460.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus selenitireducens MLS10] gi|297142137|gb|ADH98894.1| phenylalanyl-tRNA synthetase, beta subunit [Bacillus selenitireducens MLS10] Length = 806 Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 243/836 (29%), Positives = 420/836 (50%), Gaps = 62/836 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + WLK +++ D V+ E++ + +T G+EV+ ++ ++A ++ + KVLS E++PD Sbjct: 1 MLVSYKWLKRYVNLDDVTPEEVAEQMTRSGIEVDSIEKKDAEITKLQVGKVLSCEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + +Q+VCGA NV + G +P M + K+RG+ S GM Sbjct: 61 DKLNVCQVDVGEEEPVQIVCGAANVGADQFVAVSRVGGRLP-GGMKIKRAKLRGVVSEGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + I P + G L L D I+++ LTPNRSD + + Sbjct: 120 ICSLQELGFEGKVIPKKYAEGIYNFPNEYTPGEDAVPLLGLDDTILELDLTPNRSDALSM 179 Query: 172 RGIALDLVAAGLGK---LKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A + VAA + + E I + SSES+ I + +++ + ++ V Sbjct: 180 LGVAYE-VAAIFDRDVRIPETPIQATERSSESM---INVHVANTADNPYYGATVIEDVTI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ L G+R ++ +VDITNYV + G P H FD + S ++VRRA E Sbjct: 236 EESPLWLQSALMMSGVRPLNNIVDITNYVLFEYGQPLHAFDLDQFGSSEVSVRRAYDNEV 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+QE LSP+++VI + ++AG++GG + D T VL+E A ++P + ++ Sbjct: 296 MKTLDDQERKLSPEHLVITNGTTPVALAGVMGGADSEVSDQTGRVLLEAAYFNPAVVRQA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-----ASDICIARNITYKP 401 + LGI +DS RFE+GVD + LI L GGT A + R+ T Sbjct: 356 SRELGIRSDSSIRFEKGVDPNRVEASAARAAGLIQDLAGGTVLLPEAKVDELNRDETV-- 413 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 I ++ + G + + D L ++ +L F V + F V+VP+ RQD+ +AD++E Sbjct: 414 --ITITLEKINSVLGTSLIVSDVLDVMRKLKFDVTENGETFTVNVPTRRQDIAIQADIIE 471 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KE 519 E+ RIYG DQI + LP T + L+ Q R +R L + E V++S + KE Sbjct: 472 EVARIYGYDQIPT-TLPNTATTPGK-LTPAQEAKRKARRYLEGAGLSEAVSYSLTTKEKE 529 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 +++ F + + + P+S D S +RT+L+P L+ A N +R D +FE+ V+ Sbjct: 530 EALGFTDAESRVRVSLPMSEDRSALRTTLVPHLVDALRHNKNRNNYDVHLFEIGSVFHTS 589 Query: 580 ------TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 P+ + Y++A G+ + + VD F K V+E + Sbjct: 590 EAVITKQPDEKTYLSAAFM---------GKWFDHAWQGEVTDVDFFAVKG----VLEGLL 636 Query: 634 S---LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 S ++++ HPGR+ + + E G+ G+ HP + L + + FE+ Sbjct: 637 STLNVENVELSPIEKEGCHPGRTAAVHINGEEA-GFIGQLHPAVAKDLSLPD-VYVFELQ 694 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTV 749 D + K + + S V+RD+A +V++ I AG + I+ L+ V V Sbjct: 695 FDRLMAVSGGTVKYEAIPRFPS---VERDIALVVNRDIQAGEIERTIQEAGGSLLKQVNV 751 Query: 750 FDVFQGKSLGEGKKSVAIQV-LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD+++G+ L GKKS+A + + P K T ++D++ + D++++ V + A LR Sbjct: 752 FDLYEGEHLEAGKKSIAFSLRYLDPAK-TLTEEDVQAVHDQVLKAVHDRHEATLRQ 806 >gi|239618504|ref|YP_002941826.1| phenylalanyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] gi|239507335|gb|ACR80822.1| phenylalanyl-tRNA synthetase, beta subunit [Kosmotoga olearia TBF 19.5.1] Length = 786 Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 245/807 (30%), Positives = 412/807 (51%), Gaps = 43/807 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M+ + WL + +D +D ++++ L+ G VE V+ + L K+ V +P+ Sbjct: 1 MRIPVEWLNEIIDLSDKDVQELTSALSLSGTAVEGVEYPWDYLEGAVTGKIEKVIPHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++ G + + VV +V+ P G + ++ + R RG+ S GM Sbjct: 61 DKLVVTEVNIG-DKLLTVVTADLSVKPEEYVAVLPEGGRL--WDLEIRKRNFRGVMSEGM 117 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 S +EL L + S I+ P+G + D L+L+ P+I+V LTPNR DC+ + GIA + Sbjct: 118 FLSFEELRLEEKSTHILRFSEAVPLGKDVKDILKLNYPVIEVELTPNRGDCLSMIGIARE 177 Query: 178 LVAAGLGKLK--EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 L A LK EIN + P+EI+ + D+ C+ + +K VR +P W++ Sbjct: 178 LRAIYKRPLKIPEIN---EVKGTDKPVEIRIE-DEG--CQRYTALVMKNVRVKESPLWLK 231 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQE 294 +RL A GLR ++ +VDITNYV L+ G+P H FD ++I + + VR A GEK+ LD + Sbjct: 232 RRLIAAGLRPLNNVVDITNYVLLETGHPVHAFDLAKIPNKKIVVRNASQGEKMTLLDGKV 291 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L +++I ++AGI+GG ++G + TTDVL+EVA++DP+ I ++ + LGI T Sbjct: 292 IELLDTDLLITDGETPLALAGIMGGANSGISEETTDVLLEVAVFDPVRIRKTARRLGIST 351 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YRFERG+D + + V+K + +L+ L + I + +P I V ++ Sbjct: 352 DSSYRFERGIDAKDSLYVIKRLATLLQQLASAEIASGIIDVGQSSEPGTIHLRKWFVDKV 411 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G VPI+D IL LGFS+ D + V+ PS R D++++ DLVEEI RIYG D+I+S Sbjct: 412 LGTVVPIKDVEEILLSLGFSLKESGDGWNVTPPSHRHDIDQEIDLVEEIGRIYGYDKIES 471 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQREL 531 E +T Q S + +KRV + S EV+ +SFI+ + + Sbjct: 472 ELPRITP-----GGCSQSSEVKTIKRVKNIMTSLGYDEVITYSFINPDSITSLDKNLKYT 526 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + NP+S +MS +R SLL GLL+ N R D IFEV ++ D + + + Sbjct: 527 LLKNPLSIEMSALRPSLLFGLLEVASYNYRRQNRDLKIFEVGKIFSVDPKKPESLSLGFL 586 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G E ++DK R V + K V+E + S+ F+ SW Sbjct: 587 AMGKENKED----YTDK-----RMVSFYTFKGVVEDVLESYGV--SVTFKEPEESWLEKR 635 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILD-FFGLSNPICGFEVYLDSIPISQKKRTKTKKV--V 708 S I E +G+FG F ++ D + + N EV++ + + +TK+ V Sbjct: 636 ASADIYI-GEKKIGFFGVFDSSLADRLYEIKNA----EVFIAELDLESLLEKETKRCINV 690 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++S V RDL+ ++ I + I+ + + D+ V D+++GK + +G +S+ I Sbjct: 691 NMSPFPRVFRDLSILISPEITYEKIKETIQKAGSKYLTDIRVTDIYRGKGIPKGFRSITI 750 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENV 794 + + +T ++D+I ++ I+ ++ Sbjct: 751 SLTFESFTETLKEDEINSAINNIISSL 777 >gi|89098884|ref|ZP_01171764.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] gi|89086288|gb|EAR65409.1| phenylalanyl-tRNA synthetase beta subunit [Bacillus sp. NRRL B-14911] Length = 804 Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 242/833 (29%), Positives = 416/833 (49%), Gaps = 60/833 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL++++D + +S ++ + +T G+EVE ++ E + + VL E++P+ Sbjct: 1 MLVSYKWLQEYVDLSGISAAQLAEKITKSGIEVEGIEILNEGIKGVVVGHVLEREQHPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C + DTG +Q++CGAPNV G A G+ +P N + K+RG ES Sbjct: 61 DKLNKCLV---DTGGEAPVQIICGAPNVDKGQKVAVATVGAVLP-GNFKIKRAKLRGEES 116 Query: 115 TGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS E +L+ + S I P D VG + L D I+++ LTPNR+DC Sbjct: 117 NGMICSLQELGIESKLVAKEFSEGIFVFPNDVEVGEDALEMLNRDDHILELGLTPNRADC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSES---------IPLEIKFDLDDSSLCKGFAM 219 + + G+A + VAA LG+ E+ + P ++ES + +E K +D+ L + Sbjct: 177 LSMLGVAYE-VAAILGR--EVKLPSPQAAESAEKASDYITVNVEAK---EDNPL---YVA 227 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTV 278 +K V+ +P WM+ RL A G+R + +VDITNYV L+ G P H FD R+ S + V Sbjct: 228 KIIKNVKVGPSPLWMQTRLMAEGIRPHNNVVDITNYVLLEYGQPLHAFDYGRLGSKEILV 287 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 RRA GE I+ LD+ E LS +++VI + ++AG++GG ++ +TT VL+E A + Sbjct: 288 RRANEGETIVTLDDAERKLSAEHLVITNGSEPVALAGVMGGANSEVQSDTTTVLLESAYF 347 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNI 397 I ++ K+ G+ +++ R+E+GVD + + L+ G + + A ++ Sbjct: 348 TAGTIRKASKDHGLRSEASTRYEKGVDPNRVRAAAERAAELMEKYASGEVLEGSVEADSL 407 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 T +P I ++ R+ G ++ + + I RL F + V+VPS R D+ + Sbjct: 408 TIEPAVISISLEKINRVLGTELAMAEVEDIFARLQFEASADNGSITVTVPSRRGDITIEE 467 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EE+ R+YG D + P+ L E +L+ Q + R V+R L + + V ++ Sbjct: 468 DLIEEVARLYGYDNL---PVTLPSGESTPGSLTEYQKKRRIVRRYLEGAGLYQAVTYALT 524 Query: 517 SKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 S++++ + RE +++ P+S D S +R S++P LL+ N R A++E V Sbjct: 525 SEKKAGQYALESREPIKLAMPMSEDRSILRQSIVPQLLEVLKYNTARQNDSLAVYETGSV 584 Query: 576 Y----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + PE ++++AA + +G S + + VD F K + Sbjct: 585 FLSNGSESLPEEREHLAAAV---------TGLWHSHPWQGEKKPVDFFVLKGIVEGLFAR 635 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + ++ + HPGR+ I S + + G+ G HP + L FE+ L Sbjct: 636 LGLEGKVEYQRASVDGMHPGRTAEIILSGKKI-GFIGGVHPTVEKDLDLKETYV-FELSL 693 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 + + + + + S + RD+A ++D AG L IIK L+ +V VF Sbjct: 694 KDVLGEETAPLQYQAIPRYPS---ITRDIALVIDSGKEAGELERIIKEAGGSLLKEVAVF 750 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++G + GKKS+A + + T D+DI D+++E V +K AVLR Sbjct: 751 DLYEGDRMEAGKKSLAFSLKYFDPEKTLTDEDIAKAHDKVLEAVKEKAGAVLR 803 >gi|223933630|ref|ZP_03625609.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|330832958|ref|YP_004401783.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis ST3] gi|223897704|gb|EEF64086.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus suis 89/1591] gi|329307181|gb|AEB81597.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis ST3] Length = 799 Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 235/816 (28%), Positives = 414/816 (50%), Gaps = 43/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D D + + + +++ G+EVE V+ + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSKLVVGQVVSAEPIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +++ G + Q+VCGAPNV+ G+ + A PG+ I N + KIRG+ES GM+C Sbjct: 61 LNTCQVNVGD-EITQIVCGAPNVKPGIKVIVALPGARIA-GNYKIKKGKIRGVESLGMLC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S E+ +SD + I LP DA VG + YL+L D II++S+TPNR+D + +RG Sbjct: 119 SLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDEIIELSITPNRADALSMRG 178 Query: 174 IALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A K K + + S +E+ + D + ++ V +P Sbjct: 179 VAHEVAAIYDSKVNFKPVVLEESDKKASDVIEVAIESDK---VAAYTARVIENVTIAPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITNY+ L G P H FD + + R+A GE ++ L Sbjct: 236 QWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKFDGKKIVARQAKEGENLVTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E DL D++VI+ + ++ G++GG + D+N+ V++E AL+D +I ++ L Sbjct: 296 DGEERDLITDDIVISVGDKAVALGGVMGGANTEIDNNSKTVVLEAALFDGKSIRKTSGRL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G+++ + + ++I L GG S I A ++ + Sbjct: 356 NLRSESSSRFEKGINVATLTEAMDTAAAMIAELAGGQVLSGIVSAGSVDTSDVPVTATID 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V R G ++ I RLG G+ +F V+VP R D+ ADLVEEI RIYG Sbjct: 416 YVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTVAVPRRRWDIRIPADLVEEIARIYGY 475 Query: 470 DQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + + P L + ED L+L Q+ R V+ + + E+++++ + E++V F Sbjct: 476 NNL---PTTLPK-EDGTAGELTLTQNIRRQVRSLAEGAGLTEIISYALTTPEKAVEFAAR 531 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + E++ P++ D S +R +++ G+L NV R + A++E+ ++E + ++ Sbjct: 532 PTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVARKNKNLALYEIGKIFEQ-SGNPKED 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I K + + G L ++K + VD F AK ++E L + A Sbjct: 591 LPQEINKFALVLTG---LVAEKDFQTPAVPVDFFHAKG----ILEAIFGHYKLAVDFVAT 643 Query: 646 S---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 S HPGR+ I + V+G+ G+ HP +G+ E+ LD+I ++ Sbjct: 644 SEIAALHPGRTAEIHLNGA-VIGFVGQVHPQTAKDYGIPETYVA-EINLDAI---EEALQ 698 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGE 760 + +S V RD+A ++ + +++ I V RL VT+FDV+ G ++ Sbjct: 699 PAQPFTEISKFPAVSRDIALLLSSDVKHQDVLDAIAGAGVKRLT-KVTLFDVYAGSNIEA 757 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 GKKS+A + Q D+ D+++ M++I + +V+ Sbjct: 758 GKKSMAYNLTFQNPADSLTDEEVAKYMEKISKALVE 793 >gi|318061731|ref|ZP_07980452.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces sp. SA3_actG] gi|318077899|ref|ZP_07985231.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces sp. SA3_actF] Length = 845 Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 259/875 (29%), Positives = 411/875 (46%), Gaps = 102/875 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGQVRAIEELE 60 Query: 54 --RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + + E+Q +VCGA N VG V PG+ +P + + RK Sbjct: 61 GFKKPIRFCHVDVGEANGTGELQEIVCGARNFAVGDKVVVVLPGAVLP-GDFAIAARKTY 119 Query: 111 GIESTGMMCSEKELMLSD----------DSASIMELPIDAPVGGRLSDYLELSDPIIDVS 160 G S GM+CS EL + D + I+ LP VG + LEL D ++D++ Sbjct: 120 GKTSHGMICSADELGMGDWGSPRTESGGGTHGIIVLPPQYEVGTDAIELLELVDEVLDIA 179 Query: 161 LTPNRSDCIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKG 216 +TP+R C+ +RGIA + +A GL L++ I++ P ++ P+EI D C Sbjct: 180 VTPDRGYCLSMRGIARETAIAYGL-PLRDPALIDVPGP-NAHGYPVEIA----DPFGCDR 233 Query: 217 FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F V G+ P WM +R++ G+R +S VDITNYV L+ G P H +D S++ Sbjct: 234 FTARTVAGLDPEARTPIWMARRIQKAGMRPVSLTVDITNYVMLELGQPLHAYDRSQVRGP 293 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA-----GCDDNTTD 330 + VRRA +GE + LD Q+ L +++VI + +AG++GG G + TT+ Sbjct: 294 IGVRRARAGETLKTLDGQQRKLDAEDLVITDERGPIGLAGVMGGAETEIADHGAELGTTE 353 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD 390 VLVE A +D I IAR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 354 VLVEAAHFDQITIARASRRHKLASEASRRFERGVDPEAASAAAQRTVDLLVLLAGGTADA 413 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 PR + R++G+ E +R L+++G V G+ D+ V+VPSWR Sbjct: 414 GVTEVIAPSAPRTVTMPAGHPDRVAGVAYGRETVVRRLQQVGCDVYGQ-DELIVTVPSWR 472 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ DL EE++R+ G + + S L + R L+ +Q R V R LA +E Sbjct: 473 PDLTAPNDLAEEVIRLEGYENLPST---LPRPPAGRGLTERQRFHRRVGRALAGHGYVEA 529 Query: 511 VNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 +++ FI + G +R + ++NP+S + +RT+LLPGLL A RN R Sbjct: 530 LSYPFIGTDAFDALGLADDDPARRVVRLVNPLSDEEPALRTTLLPGLLAALRRNEGRGSH 589 Query: 566 DFAIFEVSHVYENDT--------------------------PEGQKYMA---AGIRKGSS 596 D A+FE V+ PE +++A AG R+ S Sbjct: 590 DLALFETGLVFHPRAESVVPERLPVAQRPEDSRLDELNAALPEQPRHLAVVLAGARE-RS 648 Query: 597 GIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 G G GR W+D + + L GA +HPGR Sbjct: 649 GWWGKGRPADWADAV---------------EAARTAAAEAGADLVVRKGAYGPWHPGRCA 693 Query: 655 IIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 + AE V+G+ GE HP ++ GL C E+ LD++ + + ++ Sbjct: 694 ELVAFVDGAERVIGHAGELHPRVIKALGLPARACATELDLDALERAGAGAVQAPRI---- 749 Query: 712 SLHPVK-RDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S +PV +D+A +V +PA + + ++ L++ + +FDV+ G L EG KS+A + Sbjct: 750 SNYPVATQDVALVVPADVPAAEVESALREGAGELLESLRLFDVYTGDQLAEGHKSLAYAL 809 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T ++ D V + T AVLR Sbjct: 810 RFRAADRTLTVEEATAARDAAVALAAEHTGAVLRG 844 >gi|257898675|ref|ZP_05678328.1| phenylalanyl-tRNA synthetase [Enterococcus faecium Com15] gi|257836587|gb|EEV61661.1| phenylalanyl-tRNA synthetase [Enterococcus faecium Com15] Length = 806 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 227/822 (27%), Positives = 423/822 (51%), Gaps = 35/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGITVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFSYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A + SS+ IK ++D + + + ++GV +P Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSQLASDRIKVTVEDKEVVPAYQIRIIEGVNIQPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R I+ +VD+TNY+ L G P H FD ++ S+ + VR A E ++ L Sbjct: 240 QWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSNEILVRHAKENETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R+ K Sbjct: 300 DGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRRTAKQF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+G++ + + ++I+SL GG + I + + Sbjct: 360 NLRSESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G + +++ I E LGFS + + V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINQYLGTSLVVKEVNEIFEALGFSYEKKDHVYSVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F + Sbjct: 480 DQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVIKES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END + + Sbjct: 538 NITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP---RTH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + ++ + I G +W +K + + + VD F K ++ E + + +++ Sbjct: 595 LPQEVKHAAIAISG---IWEEKDWQTKTQNVDFFTIKGLLENLFEQLGITEDIHYQTVTE 651 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 652 IKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAAQ 704 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K +V ++ V RD+A +V + + L +I + R + D+ +FDV+QG+++ +G Sbjct: 705 KGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIHSAAGRFLTDIQLFDVYQGENIEKG 764 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T D++I M+++ + +++ A +R Sbjct: 765 HKSMAYSLTFVNPEATLTDEEINKAMEKVEKALIENLEASIR 806 >gi|313680433|ref|YP_004058172.1| phenylalanyl-tRNA synthetase beta subunit [Oceanithermus profundus DSM 14977] gi|313153148|gb|ADR36999.1| phenylalanyl-tRNA synthetase beta subunit [Oceanithermus profundus DSM 14977] Length = 779 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 242/808 (29%), Positives = 396/808 (49%), Gaps = 48/808 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M SWL++ L E + + L ++GL VE+V +R P +V +VL E P Sbjct: 1 MNVPYSWLREFLPDLPGPEAVREVLDALGLAVEEV-HRLPPPPEGVVFGRVLKAEEVPGT 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + L +D G+ + + +V GAPN R G+ A PG+ +P+ I R+IRG+ S GM Sbjct: 60 ELKKLEVDVGR-EVVTLVSGAPNARAGIGLAVARPGAVLPDGTEI-TAREIRGVASEGMA 117 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S EL + + + ++ELP DA GR + ++ + ++ LTPNR+D V G+A DL Sbjct: 118 LSPAELGVGEYAGGLLELPADALEPGRELAEVWPAEVVFELELTPNRADAFSVLGVARDL 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AA L +L+ + S + + + ++ D C + G+ +P +++L Sbjct: 178 -AAKL-ELELVEPSTEIEESPVARFVTVEVADPEGCDRYLARYAGGLEIGPSPLEAQRKL 235 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 AVGLR I+ +VD TNY + G P H FD + + + VRRA +GEKI+ LD +E L+ Sbjct: 236 LAVGLRPINNVVDATNYTMWELGSPLHAFDLEEVKEGIVVRRAKAGEKIVTLDGEERRLT 295 Query: 299 PDNVVIA----SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 P+++VIA S ++AG++G ++ + T +V++E A +DP+ + + + LG+ T Sbjct: 296 PEDLVIARKTGSGTEPVAVAGVMGAANSEVTEKTREVVLEAAHFDPVRVRLTARRLGLST 355 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-IVFMNSEVKR 413 DS YRFERGVD + P +L G A + KPR+ + F S R Sbjct: 356 DSSYRFERGVD-PNLPPRAAARFLHLLQRWTGCAVGDVVVDVGGDKPRRGVPFRPSYANR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G E L L RLG V G + + V P+WR D+ + DLVEE+ RI G + + Sbjct: 415 LLGTAFDTESQLAALARLGCEVAGGEEPYTVRPPTWRVDLNIEEDLVEEVGRILGYEHVP 474 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 +EPL L D N R ++R + EV+N+++ S L + + Sbjct: 475 TEPLALIPAPDNLNAEEPYRREEALRRAMRGLGGWEVINYTWQSPAYLSLTRAPEPRRFL 534 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP+ + +RT+L PGLL+ N + F FE+ HV+ + + +AA + Sbjct: 535 KNPMDQSKNALRTALYPGLLENLAANREERHRFF--FELGHVFLDVE---ETRLAAVL-- 587 Query: 594 GSSGIEGSGRLWSDKSEERCRFV----DLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G +E + W E V + A+A A + P + P H Sbjct: 588 GGPLVEAT---WQPAYGEGYPAVKGLLEALAARAGARVEVRP---------QPHQP--LH 633 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PG SG + + E G+ G HP + + L P+ FE+ L P+ + R + Sbjct: 634 PGVSGTVFWNDE-PRGFIGRLHPEVEEALEL-GPVYLFELVL---PLPEAAR----EFRD 684 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 L P +RDLA +V + +P ++++++ ++ +FDV++G+ L EG+KS+A Sbjct: 685 LPKFPPARRDLAVVVPEDVPHVEVLDLVRRFGGPYLEAAELFDVYRGRPLAEGQKSLAYH 744 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVK 796 + + + T D ++ M RIV V++ Sbjct: 745 LTFRHPERTLTDAEVDEEMGRIVTAVLE 772 >gi|218130892|ref|ZP_03459696.1| hypothetical protein BACEGG_02487 [Bacteroides eggerthii DSM 20697] gi|217987236|gb|EEC53567.1| hypothetical protein BACEGG_02487 [Bacteroides eggerthii DSM 20697] Length = 820 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 246/835 (29%), Positives = 412/835 (49%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGSVEEVQTIKGGLEGLVIGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGAPNV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAPNVAAGQKVVVATLGAKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D A I+ LP A G DY + SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHAGIIVLPETAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ P + E+ L+IK +++S C +A VKGV Sbjct: 181 GVARDLYAYLVQNGLPTSLKKPSVDAFAVENHDLDIKVTVENSEACPRYAGVTVKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VDITNY+ G P H FDA +I + V+ G Sbjct: 241 ESPEWLQNKLRIIGLRPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVVVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G ++T D+ +E A + P + ++ Sbjct: 301 VTLDGVERKLSERDLMICNKEEAMCIAGVFGGLDSGSTEDTKDIFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRK 403 + G+ TD+ +RFERGVD + LK ++ L GGT S D+C A + + Sbjct: 361 RRHGLNTDASFRFERGVDPNITLYCLKLAAIMVKELAGGTISSDIKDVCAAPAQDF---R 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 + +V L G + E I+ L ++ E + + VP +R DV+ D++E+ Sbjct: 418 VELSYEKVHSLIGKVISAETVKSIVASLEMKIVAETAEGLTLDVPPYRVDVQRDCDVIED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 ILRIYG + ++ + + K V L E++N S ++ Sbjct: 478 ILRIYGYNNVEIPTALKSSLTTKGEWDKSNRLQNLVAEQLVGCGFNEILNNSLT---RAA 534 Query: 523 LFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 + G + + ++NP+SAD++ MR SLL G L++ N +R +D FE + Y Sbjct: 535 YYDGLESYPAKNLVMLMNPLSADLNAMRQSLLFGGLESISHNANRKNSDLRFFEFGNCYY 594 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF- 632 E PE K +A G+ +G+ S+ + +++ KA ++ Sbjct: 595 FNEEKRNPE--KALAPYSEDYHLGLWVTGKRVSNSWAHQDEDSSVYELKAYVENIFARLG 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + L + Y S ++T L FG +L F + N EVY Sbjct: 653 LKMHDLVVGNLTDDIYAAALS--VQTRGGKRLATFGVVTRKLLKAFDIDN-----EVYYA 705 Query: 693 SIPISQ-KKRTKTKKV--VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + K K KV +S VKRDLA ++D+ + + I + +L+ +V+ Sbjct: 706 DLNWKELMKAIKNVKVNYTEISKFPAVKRDLALLLDKKVQFAEIEKIAYETEKKLLKEVS 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK+L GKKS A+ L+Q T D I +M ++V+N+ K A LR Sbjct: 766 LFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMIDKIMSKLVKNLEDKLGAKLR 820 >gi|37522495|ref|NP_925872.1| phenylalanyl-tRNA synthetase subunit beta [Gloeobacter violaceus PCC 7421] gi|41018271|sp|Q7NCQ2|SYFB_GLOVI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|35213496|dbj|BAC90867.1| phenylalanyl-tRNA synthetase [Gloeobacter violaceus PCC 7421] Length = 785 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 232/826 (28%), Positives = 406/826 (49%), Gaps = 63/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ + +WL+++++ D + ++ + LT G EVE V++R + +V +VL +P D Sbjct: 1 MRVSFNWLQEYVEFDFTPSELAEKLTMAGFEVEHVEDRRTWAAGVVVGRVLECAPHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G + + +VCGAPN R G+ AP G+ +P ++ + IRG+ S GM+ Sbjct: 61 RLHVCRVDIGTGRLLNIVCGAPNARAGIYAPVAPVGTYLPIKDLKLRAASIRGMPSEGML 120 Query: 119 CSEKELMLSDDSASIMELP-IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS +EL L S I P P+G + L L D I++V+ T NR+D + + GIA + Sbjct: 121 CSLEELGLEKASEGIHIFPEASLPLGLDVGPLLGLDDAILEVASTANRADALSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A G L+ + PL ++ + + C + ++ V AP+W+R+R Sbjct: 181 VAALTGGILRLPLVDAPLVPRG---DLAARIAEPEACPVYTATLLEEVAVGPAPDWLRER 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L+ G+R I+ +VD+TNYV L+ G P H FDA R++ L VR A GE+++ LD E Sbjct: 238 LEKAGMRPINNVVDVTNYVLLEWGQPLHAFDADRLAAGTLGVRFAHKGEQLVTLDGTERP 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+P N++I + R ++AG++GG+ T +++E A++DP I RS + + T++ Sbjct: 298 LTPANLLITAGERPVALAGVMGGEATEVGGQTRRIVLEAAIFDPPAIRRSARVFALRTEA 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLS 415 R+ERGVD + L + L L+ C G + + + + ++V + E + ++ Sbjct: 358 SARYERGVDASALEHALGRALQL-LADCAGARAVVQATDDYRRRENRVVSLRPERLAQIL 416 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKS 474 G D+P + R+L+ LGF V +F V+VP R +D+E + DL+EE+ R+ G D+ Sbjct: 417 GEDIPDAEIARVLKNLGFDVQTGPQEFAVTVPGHRLRDIEREIDLIEEVARVVGYDRFAP 476 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 L D L + R V+ + + EVV +S Q+ + + Sbjct: 477 T---LPPPADGGYLPFEDFIERRVRSLCQGAGLTEVVTYSLAPDRD-------QQPVVLS 526 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 NP+SA+++++RT+L+ GLL+ N + F FEV V+ + Sbjct: 527 NPLSAELNSLRTNLIDGLLEILRFNRSQGNMPFHAFEVGVVF---------------LRS 571 Query: 595 SSGIEGSGRL------------WSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLR 639 GI SGRL W + D F AK ++++P+ V + R Sbjct: 572 DEGIFESGRLGAVMCGEPAVGDWQKLTPP----FDWFAAKGVLAAILQPWQIEVEYQADR 627 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + HPGR+ + S E LG G+ HP + L FE+ LD + Sbjct: 628 RDER----LHPGRTASLWVSGE-RLGTLGQLHPRLASRLDLPEQTFVFEIDLDF--LIDL 680 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 R + + S P RDL+F + + +I+ + L++ V + D F+G+ + Sbjct: 681 VRERPVEFRSFSPFPPAARDLSFYAREALTVFEFERLIREQGEPLLESVALLDEFKGQGV 740 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EG +S+A +++ + T +++I + R+ + + ++ + LRS Sbjct: 741 PEGCRSLAFRMVYRS-DHTLTEEEITAVHQRVRQALAERYSVDLRS 785 >gi|300781266|ref|ZP_07091120.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium genitalium ATCC 33030] gi|300532973|gb|EFK54034.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium genitalium ATCC 33030] Length = 835 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 257/835 (30%), Positives = 406/835 (48%), Gaps = 79/835 (9%) Query: 1 MKFTLSWLKDHLDT------DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE 53 M + +WL L+ VS E++ +G E E + E P + +V +E Sbjct: 1 MLISQNWLMSLLNNAGNPGWTVSAEELDAGFVRVGFETEGYEPLPEITGPLVVGRVKEIE 60 Query: 54 RNPDLDCAI--LRIDTGKHQ---EIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + I ++D G+ E+Q ++CGA N + G L V + PG+ +P + R Sbjct: 61 ELTEFKKPIRYCQVDVGRANGTGELQGIICGARNFKEGDLVVVSLPGAVLP-GGFEIAAR 119 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRS 166 + G S GMM SE EL + S I+ L A G+ + L D + DV++TP+R Sbjct: 120 ETYGHISNGMMASEAELGFTATSDGIIVLEEGAGEPGQDAREVLGGPDTVFDVNITPDRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSS---ESIPLE----IKFDLDDSSLCKGFAM 219 + RG+ ++ +A + K++ ++ +P I L++S+ + F + Sbjct: 180 YALSARGLGREVASAFDLEYKDLAADPSIAGIDVSDVPAPAGDLIPITLEESTKAQRFGL 239 Query: 220 CCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V+G+ AP W+++ L G+RS++A D+TN+V L G P H FDA +I+ L V Sbjct: 240 RMVEGIDPKAQAPFWLKRVLMLGGVRSVNAATDVTNFVMLLTGQPMHAFDADKIAGGLRV 299 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 A GE+ LD+ + L+ ++VVI+ D IQS+A I+GG + D TT+V E A W Sbjct: 300 HNAQGGEEFETLDHVKRTLTANDVVISDDNGIQSLAAIMGGTTSEISDETTNVYFEAASW 359 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 D + +ARS ++ + +++ RFERGVD + L +L+ + GGT SD R + Sbjct: 360 DALTVARSARHHKLSSEASRRFERGVDPAIIEISLDIACALLADIAGGTISD---KRTLV 416 Query: 399 --YKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 K R + M S L G+D E +R LE +G +V G+ + V+ P+WR D+ E Sbjct: 417 GDVKDRAPIEMRVSRPSELIGVDYSKETVVRRLEEVGCAVTGDDETLRVTPPTWRTDLNE 476 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 +L+EEI+R+ G+D I PL L R LS Q R R V LA +E++ F Sbjct: 477 PVELIEEIVRLEGLDDI---PLELPTPRGGRGLSPVQRRRRAVTHALAYSGYVEIIPTPF 533 Query: 516 ISKEQSVLFG---GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + +G G +R +++ NP+ AD + + T+LLP +L+A GRNV R D A++ Sbjct: 534 MPNTVLDTWGLESGDKRRKTVQVQNPLDADYAVLATTLLPTMLEAVGRNVARGRTDLALY 593 Query: 571 EVSH-------------VYENDTPE----------GQKYMAAGIRKGSSGIEGSGRLWSD 607 V+ V E TPE Q AA + G+ +EG W Sbjct: 594 SVAQTVFKTADESPMPSVLERPTPEVLEELIGSLPEQHLHAATVAIGNKELEGP---WG- 649 Query: 608 KSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 + R DA A V + V LD ES +HPGR + +V GY Sbjct: 650 ----KGRTYTWADAIESAQIVAKSCGVELD---IESAEHLPWHPGRCAQLSVDGSVV-GY 701 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 GE HP IL+ GL C E+ L ++PIS+ LS+ + +D+A +VD Sbjct: 702 AGELHPQILEALGLPERTCAMEIDLTALPISENLPAPV-----LSAFPALHQDIALVVDD 756 Query: 727 HIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 IPA T+ +++ L++ V +FDV++ +LG+GKKS+A ++ + T D Sbjct: 757 DIPAETVRRTLVETAGELLETVELFDVYRSDALGDGKKSLAFGLVFRASDRTLTD 811 >gi|298376765|ref|ZP_06986720.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_19] gi|301310099|ref|ZP_07216038.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 20_3] gi|298266643|gb|EFI08301.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 3_1_19] gi|300831673|gb|EFK62304.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 20_3] Length = 820 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 256/845 (30%), Positives = 413/845 (48%), Gaps = 67/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++LD D+ E++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYLDFDLEPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGEAPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP DA VG DY + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPADAVVGTLAKDYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K + P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPAELRRPSVDAFKIDDETPGVEVV--VENTEACPRYSGVTIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL+ +GLR I+ +VDITN++ + G P H FDA +I + + V+ A +G Sbjct: 239 VKESPEWLQNRLRVIGLRPINNVVDITNFILHELGQPLHSFDAGKIKGNKVIVKAAEAGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + I G+ GG +G + TTDV +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIGGVFGGLDSGVTEETTDVFLESACFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KP 401 + + G+ TD+ +RFERG+D + VLK LI L GG I A Y +P Sbjct: 359 TARRFGLNTDASFRFERGLDPNNTMYVLKRAALLIQELAGGK---ITGAVQDVYPTVAEP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + ++ L G D+P+E IL L ++ E + + VP +R DV+ D++ Sbjct: 416 YTVEVTYEKINTLIGKDIPVETVKSILASLEMEIVSETAEGLTLHVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R + L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSWKLQNLISEQLCGCGFNEIMNNS 529 Query: 515 FISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + E ++NP+SAD++ MR +LL G L++ N+ R + Sbjct: 530 LT---RSAYYTDLSVYPEAHCVMLMNPLSADLNCMRQTLLFGGLESIEHNMKRKNGNVRF 586 Query: 570 FEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKA 623 +E + Y+ D + + +A GI +G W+ E+ +++ KA Sbjct: 587 YEFGNCYDYNIDNKKEDETLAQFSEDYRLGIWVAGNRVENNWAHPDEKSS----VYELKA 642 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V + + F + Y G S I T + LG G + + Sbjct: 643 YVENILARLGVDMKRVIFGNLTNDIYSSGLS--ITTGSGRQLGTMGIVSKKLRKMLDID- 699 Query: 683 PICGFEVYLDSIPISQ-KKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 EVY + +Q K K KV +S VKRDLA ++D+ + + I K+ Sbjct: 700 ----MEVYYAELSWTQLMKEIKKAKVTFSEISKFPAVKRDLALLLDKSVQFSEVEKIAKD 755 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 DR L+ +V++FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K Sbjct: 756 SDRKLLKEVSLFDVYEGKNLPAGKKSYAVSFFMQDESKTLNDKQIDAIMKKIQTNLEQKL 815 Query: 799 NAVLR 803 A LR Sbjct: 816 GAQLR 820 >gi|170761831|ref|YP_001788449.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum A3 str. Loch Maree] gi|169408820|gb|ACA57231.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A3 str. Loch Maree] Length = 794 Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 245/832 (29%), Positives = 422/832 (50%), Gaps = 68/832 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPVKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SE I +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSEGIKDSLKVEVKDA-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEGEKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMNRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G D+ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTDISTEEMQECLDRLDLNTEIKGEILEIHVPTFRCDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFIS---------KE 519 I P+T ++ + + + R V +L + + + +++SF+S KE Sbjct: 477 I-----PITTIKSVTMQAGKNEKQRLDDKVIEILMASGLNQSISYSFVSPKVFDKINLKE 531 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--E 577 S L ++ ++I NP+ D S MRT+ + ++++ RN R A+FE+ +Y Sbjct: 532 DSDL----RKVVKIKNPLGEDFSIMRTTTISSMMESLSRNYSRNNDYAALFEIGKIYIPR 587 Query: 578 NDT---PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-V 633 DT P+ + + G L+ + V+ F+ K ++++ + Sbjct: 588 EDTIELPDERNILTLG-------------LYGN--------VNYFNLKGIVENILDGLGI 626 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYLD 692 L+ ++ P+ +HPGR+ + + V G GE HP++ D + + C E+ LD Sbjct: 627 DNSKLKRQAENPT-FHPGRTAELYIKKDYV-GILGEIHPDVQDNYDIEEERCYVAELNLD 684 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFD 751 + K K+ L V RD+A IVD + + NIIKN +++ + +FD Sbjct: 685 ---VLYKYSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHLFD 741 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 742 VYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 793 >gi|323490475|ref|ZP_08095682.1| phenylalanyl-tRNA synthetase beta chain [Planococcus donghaensis MPA1U2] gi|323395879|gb|EGA88718.1| phenylalanyl-tRNA synthetase beta chain [Planococcus donghaensis MPA1U2] Length = 799 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 241/831 (29%), Positives = 424/831 (51%), Gaps = 59/831 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +++WLKD+++T + ++ + +T G+EV+ V D ++ + V S ++P+ Sbjct: 1 MLVSINWLKDYVNTQQLPPAELGEKITRSGIEVDAVIDRSHGMTNVVVGYVESCVKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q++CGAPN+ G + A PG+ +P + + K+RG ES GM Sbjct: 61 DKLSICQVDVGE-ETAQIICGAPNIAEGQKVIVARPGAKLP-GGIKIKKAKLRGEESNGM 118 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL + + I LP DA G + L D ++++ LTPNR+D + + Sbjct: 119 ICSLQELGIEGKLVPKAYAEGIYVLPKDAETGSDVIANFNLDDTVLELGLTPNRADAMSM 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K IS S+++ + +D + V+ ++ +P Sbjct: 179 LGVAYEVGAILSEEVKLPEISYQESADTAASMLTLTVDAPEANPLYVAKVVRNIKVQESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++QRL A G+R + +VD+TNYV ++ G P H FD + + +TVR A GE I L Sbjct: 239 MWLQQRLMAAGVRPHNNVVDVTNYVLMEYGQPLHAFDYDLLGTGNITVRHAKEGEMITTL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ E LS +VI + + +IAG++GG ++ D TT V++E A ++ ++ ++ K+ Sbjct: 299 DDAERKLSAHQLVITNGEKPVAIAGVMGGANSEVSDATTTVVIESAYFESGSVRQTSKDH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV----- 405 G+ +D+ RFE+GVD +IP + L+ L GG + + K KIV Sbjct: 359 GLRSDASSRFEKGVDPNRVIPAAERAAQLLSELAGGEVLSGSVVFDKVSKEEKIVKVSPD 418 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 F+NS + G+ + E+ L IL RL F+ + +SVP+ RQD++ D++EEI R Sbjct: 419 FINSRL----GMKIAFEEMLDILNRLKFTTEAVNGQLVISVPTRRQDIQIPEDVIEEIAR 474 Query: 466 IYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 ++G D+I P L + E L+ Q++ R V+ L +++ +S S++ + F Sbjct: 475 LHGYDEI---PATLPEAETTPGGLTPYQAKRRIVRNFLEGAGLLQATTYSLTSEKSAKQF 531 Query: 525 GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 + E +L P+S + S +R SLLP LL++ N R + A++E V+ E Sbjct: 532 ALEKTETTRLLMPMSEERSILRQSLLPHLLESVTYNTARRMDSVALYETGAVFLKGNDEL 591 Query: 583 --GQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKA--DALSV---IEPFVS 634 Q+++A I LW D S + + VD F K +ALS +E Sbjct: 592 LNEQEHLAVAITG----------LWLDNSWQGEKKPVDFFVLKGIVEALSAKLGVE---- 637 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 L FE G HPGR+ + + + + G G+ HP+ L + E+ L +I Sbjct: 638 ---LTFERGQMDDLHPGRTAFVVLNGQRI-GVIGQLHPSEQKARDLKTTVV-MELNLAAI 692 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 + + +V S+ RD+A ++ + + A T+ N+I++ +L+ DV VFD++ Sbjct: 693 LTLETEALVYTQVPRYPSM---SRDVALVLSKFVEAATIENVIRSAGGKLLKDVRVFDLY 749 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G + EGKKSVA + + T D+++ ++++ + A LRS Sbjct: 750 EGDKMEEGKKSVAFSLTYFDPEKTLTDEEVTKAHEKVL-AALTDVGAELRS 799 >gi|257415730|ref|ZP_05592724.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis AR01/DG] gi|257157558|gb|EEU87518.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis ARO1/DG] Length = 807 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|170756823|ref|YP_001782764.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum B1 str. Okra] gi|169122035|gb|ACA45871.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum B1 str. Okra] Length = 793 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 244/834 (29%), Positives = 421/834 (50%), Gaps = 73/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPVKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SESI +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSESIKDSLKVEVKDA-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA EK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEREKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTNISKEEMQEFLDRLDLNTEIKGEILEIHVPTFRCDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFIS-------- 517 I P+T + +++++Q + V L + + + +++SF+S Sbjct: 477 I-----PITTI---KSVTMQAGKNEKQHLDDKVIETLMASGLNQSISYSFVSPKVFEKIN 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 KE S L ++ ++I NP+ D S MRT+ +P +++A RN R ++FE+ +Y Sbjct: 529 LKEDSNL----RKVVKIKNPLGEDFSIMRTTTIPSMVEALSRNYSRNNDYASLFEIGKIY 584 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + + G L+ D VD F+ K ++++ Sbjct: 585 IPKEDPTELPDEKNILTLG-------------LYGD--------VDYFNLKGIVENILDG 623 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L+ + P+ +HPGR+ + + V G GE HP++ D + + E+ Sbjct: 624 LGIDNYKLKRQEENPT-FHPGRTAELYIKKDYV-GILGEIHPDVQDNYDIEERCYVAELN 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + K K+ L V RD+A IVD + + NIIKN +++ + + Sbjct: 682 LD---VLYKHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHL 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 739 FDVYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|309775751|ref|ZP_07670747.1| phenylalanyl-tRNA synthetase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] gi|308916514|gb|EFP62258.1| phenylalanyl-tRNA synthetase, beta subunit [Erysipelotrichaceae bacterium 3_1_53] Length = 800 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 247/835 (29%), Positives = 421/835 (50%), Gaps = 66/835 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MK + WL ++D +D+S+E+I D +TS GLEVE ++ S I KVL+ E +PD D Sbjct: 1 MKISKKWLSQYMDISDLSIEEIADKITSAGLEVEGIEKMSQGSNLVIGKVLTCEDHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ E Q+VCGAPNV G + A G+ +P+ + V IRG S GM+ Sbjct: 61 HLHVCQVDLGERTE-QIVCGAPNVAAGQKVIVARVGAKLPDGEIKAGV--IRGQASNGMI 117 Query: 119 CSEKEL-----MLSDDSASIME-LPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCIGV 171 CS EL LS++S + +E L APVG YL D I+DV LTPNR+DC+ Sbjct: 118 CSLLELGVDPHQLSEESKNGIEVLDEAAPVGNENPLAYLGFDDEILDVGLTPNRNDCMAA 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL---DDSSLCKGFAMCCVKGVRNN 228 +AL+ G + +S P S K L ++ C F + V Sbjct: 178 WSMALET-----GAILHKEVSLPYVEGSANTGDKSRLIVQSETEKCPLFLGKVINSVTIK 232 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P WMR+ L A G++SI+ +VDI+N V L+ G P H +D I + +TV+ + Sbjct: 233 PSPKWMRELLMAAGMKSINNVVDISNIVMLETGQPLHFYDIDAIPAQEITVKDQQHFD-Y 291 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD + Y + D++VI ++G+ IAGI+GG + + T +++E A+++ + I + Sbjct: 292 TALDGETYHILEDDIVITTEGKPIGIAGIMGGDDSKIEATTKGIIIEAAIFNHVAIRNTS 351 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 + L + TD+ R+++G++ + V L++ + + + +Y P + Sbjct: 352 RRLNLGTDASVRYQKGIEPMATYKAMDRAVQLLVEYADASGLEETKQYGSNSYTPVEFDV 411 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + L G D ++ +++L+ L + V +PS+R D+ +AD+ EEI+RI Sbjct: 412 NLERINILLGTDFQEDEVIKVLDDLHLEPVKNNADIHVKIPSYRMDLAIEADIAEEIIRI 471 Query: 467 YGVDQIKSE--PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G D++ S +P T R QQ R +Y + +L+ E V +S +S+++ Sbjct: 472 LGYDRLPSTMPKMPSTVGALNRR---QQLRRKY-RSMLSDLGYNEAVTYSLVSQKEIEDA 527 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 Q+++ E+ P+S D +R S+LP LL+ N R+I D A+FE+S+VY E Sbjct: 528 VMPQKDIVELAAPMSEDHKYVRDSILPSLLECVAYNQARSIKDIALFEISNVYGKGHVEE 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + +AA SG L ++ + VD + K ++E LDS+ + Sbjct: 588 RLAVAA-----------SGALQENRWQNYRVEVDFYTMKG----LVEAL--LDSIGYHGS 630 Query: 644 A---------PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +HP RS + E+ LG G+ HP + + ++ + E+ L+ + Sbjct: 631 RVVCKENHTDTKHFHPYRSAEVYLGREL-LGLIGQIHPKMAQDYDIAETVA-LEINLEVL 688 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-----IDDVTV 749 ++ ++ K +V S + RDLAF+V + G ++ IK +L I +V V Sbjct: 689 LRNKPQKVKFSEV---SKYPSISRDLAFVVKDEVKVGDIITSIKKNGKLHKENIIQNVEV 745 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FDV+ G+ + +G KS+A++++ Q + T +D DI + ++I+E + K +A LR+ Sbjct: 746 FDVYTGEHVEKGSKSIALRIVFQSAERTLKDADINEIHNKILETLEKDLHAQLRA 800 >gi|257085623|ref|ZP_05579984.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis Fly1] gi|256993653|gb|EEU80955.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis Fly1] Length = 807 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S I + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAIGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|297243610|ref|ZP_06927541.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis AMD] gi|296888361|gb|EFH27102.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis AMD] Length = 873 Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 262/884 (29%), Positives = 417/884 (47%), Gaps = 121/884 (13%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + P + V+ P + Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVRVGLEEEEIHTSQVTGPIVVGYVVDATPEPQKNGKT 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G K+ ++ ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDKYNDVDENGKKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI---------DAPVGGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D I+ L + G + + L L+ PI++++ Sbjct: 125 YGHISDGMCASERELGLGDSHNGIILLREYGFSKAEYDELKPGDDVMELLHLNKPILEIN 184 Query: 161 LTPNRSDCIGVRGIA-----------LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD 209 +TP+R RG+A D V+ ++ +IN +S+ I ++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAVYTDPVSKLNEQVSQINDEGHKTSD-----IDVSIE 239 Query: 210 DSSLCKGFAMC------CVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 D++ G C V G + A P WM++RL G+RSIS VDITNYV LD G Sbjct: 240 DTNPIHGVPGCDRYYARAVHGFDSTCASPRWMQRRLTRAGMRSISLAVDITNYVMLDLGQ 299 Query: 263 PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQSIAGI 316 P H +D +I + VRRA GE + LD ++++L +++VI R+ +AG+ Sbjct: 300 PLHAYDLDKIEGPIVVRRAHDGEHLTTLDGKDHELHVEDLVICDSPHGNHGSRVLGLAGV 359 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 +GG + T ++L+E A +DP++IAR+ + I +++ RFERGVD Q + P + Sbjct: 360 MGGMYGEVTSETKNILIEAAHFDPVSIARTARRHKIPSEASRRFERGVDTQ-LQPAAAQM 418 Query: 377 VSLILSLCGGT--ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS 434 + +L GG ++ C N T IVF +EV+R++G++V + IL +G S Sbjct: 419 AANLLEQFGGAKPSTSPCDVNN-TQSRNVIVFKANEVQRVAGLEVDLNRISDILTDIGCS 477 Query: 435 VIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 V G + F V P+WR D+ E DLVEEI R+ G D+I + +P V + L+ QQ Sbjct: 478 VAGGGNGSFSVLPPTWRPDLNEPCDLVEEIARLIGYDEIPVK-VPAVPVTGRTGLTTQQQ 536 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSL 548 R + LA +E +++ F+ +E F E + I NP++ D +R S+ Sbjct: 537 TRRAIAYELAETGFVESLSYPFVGEEDIKAFRQNVDEVAEVSVRIANPLAGDRPWLRRSV 596 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYENDT--------------------------PE 582 L L RN+ R + D +++E+ HVY +D PE Sbjct: 597 LMTLAGTVRRNLHRGLTDISMYELGHVYFSDPNAPAIPALPGSVRPSNAELAALDAGLPE 656 Query: 583 GQKYMAAGI--RKGSSGIEGSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 ++AA + +G G+ R WSD E R K ++E F + D Sbjct: 657 QPLHVAALLTGHAEETGWLGTHRDVDWSDAVEALQRVGKRIGVKF----ILEQFKAQD-- 710 Query: 639 RFESGAPSWYHPGRSGIIKTSAE----IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 APS +HPGRS + AE + LG GE HP++ + L FE LD Sbjct: 711 -----APSSWHPGRSAQVCVLAEDGSSVNLGVVGELHPHVCEALDLPKHSAAFE--LDLT 763 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVF 753 + + K + +S+ PVK+D AF + A L + I K+ L++ V +FDV+ Sbjct: 764 ELFKNMLMKPVQAKPISTFPPVKQDFAFTAPIELKANELQSAIEKSAGDLLESVELFDVY 823 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +G+ LGEG +S+A V TFR +D R L +E V KK Sbjct: 824 EGEQLGEGLRSLAYSV-------TFRAND-RTLSGEEMEEVRKK 859 >gi|212704414|ref|ZP_03312542.1| hypothetical protein DESPIG_02469 [Desulfovibrio piger ATCC 29098] gi|212672135|gb|EEB32618.1| hypothetical protein DESPIG_02469 [Desulfovibrio piger ATCC 29098] Length = 800 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 229/818 (27%), Positives = 415/818 (50%), Gaps = 46/818 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M +LSWL++ + + + +++ D LT +GLE+E+ V +A++P + V+ +P+ D Sbjct: 1 MLLSLSWLREFVPYEGTAQELGDRLTMLGLELEEIVRPYDAIAPIVVGHVVECVDHPESD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + + +VCGAPNV G A G+ +P +++ K+RG S GM+ Sbjct: 61 HLHICKVDAGQGELLDIVCGAPNVAAGQKVPVALVGTTMP-GGLVIKKAKLRGAPSFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L++D + IM LP A G RL D LEL ++D+S+TPNR+DC+ V G+A + Sbjct: 120 CSERELGLTEDHSGIMVLPDSAVPGTRLVDTLELDHEVLDISITPNRADCLSVLGLARET 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL--------EIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 A + PL+ +PL ++ D LC +A + GV+ + Sbjct: 180 ALA---------FNLPLTIPELPLCEDGPARDLPSVEVSDPELCNLYAGRVIAGVKIAPS 230 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P +R RL AVG+R IS +VD+TNY+ + G P H FD ++ + + V A GEKI+ Sbjct: 231 PMRIRHRLHAVGVRPISNIVDVTNYILFECGQPLHSFDLDKLRGNRIIVSPAAQGEKIVT 290 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD QE L P ++ I R ++AG++GG+ DD +T+V +E A++ P I ++ + Sbjct: 291 LDGQERTLDPRDLCIRDAERAVALAGVMGGQATEIDDASTNVFLESAVFRPGTIRKTSRR 350 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMN 408 LG+ ++S YRFERG+D + I L +++++ GG +A + P +I F Sbjct: 351 LGLSSESSYRFERGIDHKRSIWALDRACAMMVAAAGGKVCPGYTLAEPKPFVPVQIEFRP 410 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G+++ + ++L +G ++ D ++V+ PSWR D+ +ADL+EE+ R++ Sbjct: 411 ARANALLGVELSRDFDEKVLSGMGCAIEKTSDDSWQVTQPSWRPDLTREADLIEEVGRVH 470 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL---ASRAMMEVVNWSFISKEQSVLF 524 G+D I E LP ++D + S ++ R+ A + E VN+SF+ + L Sbjct: 471 GLDTIAPE-LP-AFLQDLGHAGEPMSTFQFWSRLRHWGAGLGLNEAVNYSFVGHKDLDLL 528 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G + + I+NP+SA+ +RT L PGLL N+ + A +FE+++ + P Sbjct: 529 GLPAEGRISIMNPLSAEQDALRTVLAPGLLHDLRNNLAQGAAGVRLFELANTF-TAAPSD 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + G G+ L+ + + V+ +D ++E + +L Sbjct: 588 DPHATGASETGMLGV----LLYGQRHDSAWPHVEADMDYSDLKGIVEHLLHFLNLSAPVC 643 Query: 644 APSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HP ++ S + +G G P + D F + E+ LD + +R Sbjct: 644 ELAEGHPYLLPCVRLSVDGTEVGVMGRVRPEMADSFHARKDVWLAELNLDVL-----RRL 698 Query: 703 KTKKVVHLSSLH---PVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSL 758 V SL PV+RD+ + G +++ I+ L++ + D F + Sbjct: 699 HDAAQVRFQSLAVFPPVRRDITVAAPVGVTVGAILDQIMGQKQPLLEGAVLVDSFSPE-- 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 G ++++ ++ + + T +D ++ + +++ +++V+ Sbjct: 757 GSDERNLTFRLTFRHAERTLKDAEVDKVREKVAQSLVQ 794 >gi|256965483|ref|ZP_05569654.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|307273807|ref|ZP_07555029.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] gi|256955979|gb|EEU72611.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis HIP11704] gi|306509492|gb|EFM78540.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0855] Length = 807 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S I + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAIGSEVDVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTSLDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|302023910|ref|ZP_07249121.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus suis 05HAS68] Length = 799 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 235/816 (28%), Positives = 413/816 (50%), Gaps = 43/816 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D D + + + +++ G+EVE V+ + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSKLVVGQVVSAEPIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +++ G + Q+VCGAPNV+ G+ + A PG+ I N + KIRG+ES GM+C Sbjct: 61 LNTCQVNVGD-EITQIVCGAPNVKPGIKVIVALPGARIA-GNYKIKKGKIRGVESLGMLC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S E+ +SD + I LP DA VG + YL+L D II++S+TPNR+D + +RG Sbjct: 119 SLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDEIIELSITPNRADALSMRG 178 Query: 174 IALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A K K + + S +E+ + D + ++ V +P Sbjct: 179 VAHEVAAIYDSKVNFKPVVLEESDKKASDVIEVAIESDK---VAAYTARVIENVTIAPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITNY+ L G P H FD + + R+A GE ++ L Sbjct: 236 QWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKFDGKKIVARQAKEGENLVTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E DL D++VI+ + ++ G++GG + D+N+ V++E AL+D +I ++ L Sbjct: 296 DGEERDLITDDIVISVGDKAVALGGVMGGANTEIDNNSKTVVLEAALFDGKSIRKTSGRL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G+ + + + ++I L GG S I A ++ + Sbjct: 356 NLRSESSSRFEKGIHVATLTEAMDTAAAMIAELAGGQVLSGIVSAGSVDTSDVPVTATID 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V R G ++ I RLG G+ +F V+VP R D+ ADLVEEI RIYG Sbjct: 416 YVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTVAVPRRRWDIRIPADLVEEIARIYGY 475 Query: 470 DQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + + P L + ED L+L Q+ R V+ + + E+++++ + E++V F Sbjct: 476 NNL---PTTLPK-EDGTAGELTLTQNIRRQVRSLAEGAGLTEIISYALTTPEKAVEFAAR 531 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + E++ P++ D S +R +++ G+L NV R + A++E+ ++E + ++ Sbjct: 532 PTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVARKNKNLALYEIGKIFEQ-SGNPKED 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + I K + + G L ++K + VD F AK ++E L + A Sbjct: 591 LPQEINKFALVLTG---LVAEKDFQTPAVPVDFFHAKG----ILEAIFGHYKLAVDFVAT 643 Query: 646 S---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 S HPGR+ I + V+G+ G+ HP +G+ E+ LD+I ++ Sbjct: 644 SEIAALHPGRTAEIHLNGA-VIGFVGQVHPQTAKDYGIPETYVA-EINLDAI---EEALQ 698 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGE 760 + +S V RD+A ++ + +++ I V RL VT+FDV+ G ++ Sbjct: 699 PAQPFTEISKFPAVSRDIALLLSSDVKHQDVLDAIAGAGVKRLT-KVTLFDVYAGSNIEA 757 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 GKKS+A + Q D+ D+++ M++I + +V+ Sbjct: 758 GKKSMAYNLTFQNPADSLTDEEVAKYMEKISKALVE 793 >gi|154249614|ref|YP_001410439.1| phenylalanyl-tRNA synthetase subunit beta [Fervidobacterium nodosum Rt17-B1] gi|154153550|gb|ABS60782.1| phenylalanyl-tRNA synthetase, beta subunit [Fervidobacterium nodosum Rt17-B1] Length = 780 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 238/805 (29%), Positives = 418/805 (51%), Gaps = 40/805 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREAL---SPFTIVKVLSVERNPD 57 M+ +L WL +++D VS E++ + L +G +++ DN P I K+ VE++P+ Sbjct: 1 MRISLEWLNEYID--VSREEVLEKLPKLGFDID--DNGPVFPINGPIVIGKIEKVEKHPN 56 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 + I ++ G ++ +V+ G A G+ + N + + R++RGI S G Sbjct: 57 AEKLVICTVNIGSEHR-TILTADVSVQTGKYVYVALEGAKLA-NGVEIQKREMRGIFSEG 114 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS +EL L + S + + P+G + L LSD I++ +TPNR DC+ G+ Sbjct: 115 MLCSLEELGLEEKSEHVYTTDEELPLGEDVIRLLGLSDWYIEMEITPNRPDCLSYFGVTR 174 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +L +AGL + I ++ + ++I+ D C + + V+ +P W+++ Sbjct: 175 EL-SAGLKRTPRFPIPSVKAAGNSKVDIEIKTDG---CWRYTARVINNVKVKPSPMWLQK 230 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A GLR I+ +VDITNYV L+ G+P H FD S+++ + V+ A GEK+L LD + Y+ Sbjct: 231 RLIASGLRPINNIVDITNYVMLETGHPVHAFDLSKLAGRIVVKDANPGEKMLLLDGKTYE 290 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 S V+I ++ ++ GI+GG+ +G + TTDVL+EVA++DP+ I R+ + L + +DS Sbjct: 291 FSGGEVLITDGEKLLALGGIMGGEESGISETTTDVLLEVAMFDPVRIRRTSRKLSVSSDS 350 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV-KRLS 415 YRFERGVD + V++ + LI L G S + +K++F+ K++ Sbjct: 351 SYRFERGVDFDDALYVIERLSELIQKLADGEPSAEIVDVWKKKLQQKVIFVPKHFPKKVI 410 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKS 474 GI+V + +E LGF V D ++V VPS+R DV D++EE+ RI+G D I + Sbjct: 411 GIEV--KHIGEYIEPLGFEVEETKDGYQVYVPSFRYFDVSIPEDIMEEVGRIHGYDNIHA 468 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 EP + +E R+ Q + RY +K++L S E SF S + F + L + Sbjct: 469 EPPRMLAIEKGRS---QIQKLRYELKQLLTSFGFNEANTLSFTSSKLIEKFEINGKGLPV 525 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPI +D MR S+L GLL++ N R I D +FE+ ++ + G+ + + Sbjct: 526 SNPIISDFDTMRPSILYGLLESLSYNYKRQIKDIRLFEIGKIF--NLKNGKPFEEEALAF 583 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 ++G E S ++DK R V + K ++ F +FE + + P R Sbjct: 584 VATGRE-SVNDYTDK-----RNVSFYTFKGVIDEILLRFGI--KAQFEKYSKKGFIPTRC 635 Query: 654 GIIKTSAEIVLGYFGEFHPNILD-FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 +IKT + + G+ G P I D + + + I E+YL+ I S K + K + Sbjct: 636 ALIKTHGKDI-GFIGMLEPEIADKLYDVKDEIYVAEIYLEKIYESAKTQKTYKAIPQFPY 694 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 ++RD+++++ ++ I K+ + L+++V + D++ + +GEG SV I + Sbjct: 695 ---IRRDVSYLIPIGQEIAGILEIYKS-NPLVEEVGIDDIY--RQVGEGYYSVTIYAKFR 748 Query: 773 PLKDTFRDDDIRILMDRIVENVVKK 797 + T D+++ I ++ I + + +K Sbjct: 749 HPERTLSDEEVDIAIEDIKKQIKEK 773 >gi|262381626|ref|ZP_06074764.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_33B] gi|262296803|gb|EEY84733.1| phenylalanyl-tRNA synthetase, beta subunit [Bacteroides sp. 2_1_33B] Length = 820 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 257/845 (30%), Positives = 413/845 (48%), Gaps = 67/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++LD D+ E++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYLDFDLEPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGEAPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP DA VG DY + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPADAVVGTLAKDYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K + P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPAELRRPSVDAFKIDDETPGVEVV--VENTEACPRYSGVTIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL+ +GLR I+ +VDITN++ + G P H FDA +I + + V+ A +G Sbjct: 239 VKESPEWLQNRLRVIGLRPINNVVDITNFILHELGQPLHSFDAGKIKGNKVIVKAAEAGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + I G+ GG +G + TTDV +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIGGVFGGLDSGVTEETTDVFLESACFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KP 401 + + G+ TD+ +RFERG+D + VLK LI L GG I A Y +P Sbjct: 359 TARRFGLNTDASFRFERGLDPNNTMYVLKRAALLIQELAGGK---ITGAVQDVYPTVAEP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + ++ L G D+P+E IL L +I E + + VP +R DV+ D++ Sbjct: 416 YTVEVTYEKINTLIGKDIPVETVKSILASLEMEIISETAEGLTLHVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R + L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSWKLQNLISEQLCGCGFNEIMNNS 529 Query: 515 FISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + E ++NP+SAD++ MR +LL G L++ N+ R + Sbjct: 530 LT---RSAYYTDLSVYPEAHCVMLMNPLSADLNCMRQTLLFGGLESIEYNMKRKKGNIRF 586 Query: 570 FEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKA 623 +E + Y+ D + + +A GI +G W+ E+ +++ KA Sbjct: 587 YEFGNCYDYNIDNKKEDETLAQFSEDYRLGIWVAGNRVENNWAHPDEKSS----VYELKA 642 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V + + F + Y G S I T + LG G + + Sbjct: 643 YVENILARLGVDMKRVIFGNLTNDIYSSGLS--ITTGSGRQLGTMGIVSKKLRKMLDID- 699 Query: 683 PICGFEVYLDSIPISQ-KKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 EVY + +Q K K KV +S VKRDLA ++D+ + + I K+ Sbjct: 700 ----MEVYYAELSWTQLMKEIKKAKVTFSEISKFPAVKRDLALLLDKSVQFSEVEKIAKD 755 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 DR L+ +V++FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K Sbjct: 756 SDRKLLKEVSLFDVYEGKNLPAGKKSYAVSFFMQDESKTLNDKQIDAIMKKIQTNLEQKL 815 Query: 799 NAVLR 803 A LR Sbjct: 816 GAQLR 820 >gi|119962268|ref|YP_947390.1| phenylalanyl-tRNA synthetase subunit beta [Arthrobacter aurescens TC1] gi|119949127|gb|ABM08038.1| phenylalanyl-tRNA synthetase, beta subunit [Arthrobacter aurescens TC1] Length = 847 Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 252/850 (29%), Positives = 401/850 (47%), Gaps = 99/850 (11%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + D + E + L +G E E+V E P + +VLS+ + P Sbjct: 1 MRIPLSWLREFAQVPADATAEDVMADLVKVGFEEEEVHRPTDELRGPIVVGQVLSLVKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N G V PG+ +P Sbjct: 61 QTNGKTINWCQVRVVPEGQEQTLTGKGIDPSGVQGIICGAHNFVEGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPI 156 N ++ RK G S GM+ S +EL + DD I+ L +D +G + L L D Sbjct: 120 GNFQISARKTYGHLSAGMIASVRELGIGDDHDGILVLSRIGLDPEIGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-----DDS 211 ++++TP+R +RG+A + A P S S P ++ D++ Sbjct: 180 AEINVTPDRGYAFSIRGVAREYAHA-----TGTTFVDPASRVSAPASLQGGYGVKINDEA 234 Query: 212 SL-----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 + C F V+GV + P WM RL+ G+RSIS VDI+NYV L+ G P+H Sbjct: 235 PIYGKPGCDRFVARTVRGVDASRPTPPWMSARLRLAGVRSISLPVDISNYVMLELGQPNH 294 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 +D +++ + VRRA +GEKI LD++E L ++++I D IAG++GG H Sbjct: 295 CYDLDKLAGDIVVRRAVAGEKITTLDDKERTLDVEDLLITDDSGAIGIAGVMGGAHTEVS 354 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D+TT++LVE A +D ++IARS + + +++ RFERGVD + +V L++ L G Sbjct: 355 DSTTNILVEAAHFDEVSIARSRRRHKLPSEASKRFERGVDWHVANIAAQRVVDLLVELAG 414 Query: 386 GTA----SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK 441 GTA +D+ A + F ++ + GID E L LG V Sbjct: 415 GTADEAGTDVGTAPDAVTIELPAEFASARI----GIDFTDEQITTSLVDLGAVVEKTASG 470 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 + V+ PSWR D+E K DL EEI R+ G D I S LP+ R LS Q + R V + Sbjct: 471 YRVTAPSWRNDLETKEDLSEEIARLVGYDNIPST-LPVA--PPGRGLSRSQQQKRRVVQA 527 Query: 502 LASRAMMEVVNWSFISKEQSVLFG----GGQR-ELEILNPISADMSNMRTSLLPGLLKAT 556 LA + EV+++ F+SK + FG G R L++ NPIS + +RTS+LPGL++ Sbjct: 528 LADAGLTEVLSYPFVSKAANDTFGVAAEGAARPALKLANPISEEQGYLRTSILPGLIEVA 587 Query: 557 GRNVDRAIADFAIFEVSHVY-------ENDTP---------------EGQKYMAAGIRKG 594 RN R D A++E V+ + P +G Y I Sbjct: 588 RRNHSRGFRDLALYEAGSVFLPGDKLGTDSIPPLGVKPADEVLDALYDGVPYQPLHIAAV 647 Query: 595 SSGIEG-SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 +G + + + ++ + VD+ AD L V L G+ +HPGR+ Sbjct: 648 LTGHDSPAAATHTPRAWDWADAVDVARLIADVLGV--------ELVVSQGSHQAFHPGRA 699 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + V+GY GE HP +L + EV ++++ + K H+S Sbjct: 700 AQLALRTGDVVGYAGELHPKLLAAHDMPARSVALEVNVEALFEAAADVIVAK---HISGF 756 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A +V Q +PA +++ ++ L++DV++FDV+ G + +GKKS+A + Sbjct: 757 PVATQDVALVVPQDVPADQVLSALREGAGVLLEDVSLFDVYVGPGIEDGKKSLAFGL--- 813 Query: 773 PLKDTFRDDD 782 FR DD Sbjct: 814 ----RFRADD 819 >gi|297621760|ref|YP_003709897.1| Phenylalanyl-tRNA synthetase beta subunit [Waddlia chondrophila WSU 86-1044] gi|297377061|gb|ADI38891.1| Phenylalanyl-tRNA synthetase beta subunit [Waddlia chondrophila WSU 86-1044] Length = 797 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 230/810 (28%), Positives = 401/810 (49%), Gaps = 36/810 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MK LSW+ + +D ++ KI + LT GLEV+ A + +VL ER+PD + Sbjct: 1 MKLPLSWILEVIDLNLPSHKIANMLTMAGLEVDGCTPLPLAFENVVVGEVLRTERHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + ++ QVVCGAPN R GL +A GS + + + K+RG+ES G Sbjct: 61 KLCIATVFDGEEQFQVVCGAPNCRPGLKTAFAKIGSVLRDEEGKAFKIKKTKLRGVESYG 120 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CSE EL + D + IME VG +S+ D ++++SLTPN C V G+ Sbjct: 121 MLCSEDELGIGDHGSGIMEFADRIQVGADISEIY--GDTVLEISLTPNLGHCASVLGVVR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +L A + + I + E + ++ C +A +KGV+ +P+W+++ Sbjct: 179 ELAAMTGKQYRLPAIKIEENEEEAFEAVSVEVACFEKCPRYACRVIKGVKVGPSPDWLQK 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEY 295 +L A R ++ +VD TNYV ++ G+P H FD + + + VR A GE ++LD + Sbjct: 239 KLLACDQRPVNNVVDATNYVLMEMGHPLHAFDYDLLEERRIVVRTAQEGEAFVSLDEKRR 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D+++I + +IAG++GG ++ + T ++L+E A ++ I R+ K L + T+ Sbjct: 299 VLTSDDLLICDGKKPVAIAGVMGGLNSEVHEGTVNILLESAYFEAAGIRRTSKRLALQTE 358 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA----RNITYKPRKIVFMNSEV 411 + RFER D ++ L LI + GG +IC + + P+++ S V Sbjct: 359 ASRRFEREADPNQVLAALDRAAVLIKEISGG---EICRGVVDVKQKDFSPKEVKCRLSRV 415 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + G + + + + RL F V + D F +++P++R D+ + DL+EE+ RIYG D Sbjct: 416 NAVLGTQLGMSEVNDLFTRLEFGVKWDGKDTFTLTIPTYRADINSEVDLIEEVARIYGFD 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I +P D + + R ++R L + + E++ I + G Sbjct: 476 NI-PKPSSYFTSSDMPHAPIFVFE-REIRRRLMAEGLQELLTCDLIGPKLQEAVNGPIMP 533 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + +++LNP+S + S +RTSLLPGLL+ N D + + FE+ ++ + ++ Sbjct: 534 PENIVKVLNPVSVEQSILRTSLLPGLLQVAKHNYDHECRNLSGFEIGRIHFKEEGRFKEQ 593 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 AG+ G D E + D FD K S++ LD +F SG Sbjct: 594 SMAGVLL-------MGNRHPDHWERKKDGADFFDLKGIVESLLLETGVLD-YQFRSGNLH 645 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKTK 705 ++HPGR G + + V G GE HP IL LSN + E+ L + + Q +R Sbjct: 646 FFHPGRQGSLCIGEQEV-GILGEIHPTILRRMDLSNKVYYAEIDLHLLYQMRQSRRLMEP 704 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKS 764 V+ +S RDL V++++ ++ +I +V RL+++V++ D+++G+ +GE KK+ Sbjct: 705 MPVYPAS----DRDLTVTVEENVAIQEILEVISSVKSRLLENVSLIDIYRGEKVGESKKN 760 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 V ++ + + +K T + + RI + Sbjct: 761 VTLRFIYRNVKKTVSQEAVDAEHARITSQI 790 >gi|257086471|ref|ZP_05580832.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis D6] gi|256994501|gb|EEU81803.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis D6] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|315174635|gb|EFU18652.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1346] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHISICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA S E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATSAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N++I + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIIITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|312899591|ref|ZP_07758917.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] gi|311293270|gb|EFQ71826.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0470] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDITIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|171911355|ref|ZP_02926825.1| phenylalanyl-tRNA synthetase, beta subunit [Verrucomicrobium spinosum DSM 4136] Length = 799 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 248/827 (29%), Positives = 415/827 (50%), Gaps = 52/827 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVERNPDL 58 MK +LSWLK HLD + +++ + D LT G+EVE ++ R S + +VL ++P+ Sbjct: 1 MKVSLSWLKTHLDLSGNTVDSMRDLLTFAGIEVEDIEVRGVDSDKIVVAQVLESLQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ ++D G Q+VCGA N +VG A PG+ +P + + K+R + S GM Sbjct: 61 DRLSVCQVDDGSGTPRQIVCGAKNYKVGDKVPLALPGAILP-GGLEIKAGKLRDVVSNGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 MCS +EL + DD A +M L VG ++ + D + D+ +TPNR D + G+A + Sbjct: 120 MCSGRELGIGDDHAGLMILDPALKVGTPFTEVVP-PDVVFDLEITPNRPDLLSHTGLARE 178 Query: 178 LVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 L AA K E P ++ E+ P +++ LD + C ++ +KGV+ +P W++ Sbjct: 179 L-AALTKKGLEPKPPVPQATVKEATPDQVR--LDTTERCPLYSARIIKGVKVGPSPEWLQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +RL++VGLR I+ +VDITN+V L+ G P H FD +++ + VR+A GEKI+ALD Y Sbjct: 236 RRLQSVGLRPINNVVDITNFVLLEVGQPLHAFDLDKLNGGIIVRQAMEGEKIVALDAATY 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +L+ D++VIA +IAG++GG+ + + TTD+L+E A + P I R+ + LGI +D Sbjct: 296 ELTTDDLVIADTSAPVAIAGVMGGEASSVTETTTDLLLESAYFTPSFIRRTARRLGISSD 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRL 414 S YRFERGVD QG + V LIL + GGTA +++ +A + + F + + L Sbjct: 356 SSYRFERGVDPQGPLAGSDLAVKLILDIAGGTAEAEVLVAGTAPQLTQDVTFDETRARNL 415 Query: 415 SGI-DVPIEDSLRILERLGFSVIGEYDKFEV-SVPSWRQDVEEKADLVEEILRIYGVDQI 472 GI D+ E+ +L LG + E D + +PS+R D++ DLVEE+ R+ G+D++ Sbjct: 416 IGIPDLSREEMHGVLTGLGLAKKSETDTTSLWHIPSYRGDLQRSVDLVEEVARVIGLDRV 475 Query: 473 KSEPLPLTQVEDKRNLSLQQSR--TRYVKRVLASRAMMEVVNWSFISKEQ-SVLFGGG-- 527 S T +L+ ++ T +++ L +R + E IS Q + + G Sbjct: 476 PSR----TAAAFSPSLAPDRTYDFTMTLRQALVNRDVFEAQTLRLISGSQLTDVLGPALT 531 Query: 528 -QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--- 583 + + + NP+S D + +R SL+PGL+ N+ +++ FE+ V+ + P G Sbjct: 532 PDKAVGVKNPLSEDHTTLRPSLVPGLIATAALNIRQSLQRLRFFEIGRVFLKN-PNGSTR 590 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-- 641 ++ A + G S W K F DL ++E L L E Sbjct: 591 EEERLALLLSGPSLPPS----WHTKESPALEFTDL-------RGLLEALPGLAGLGLELV 639 Query: 642 -SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 P W S +K ++ LG+ + HP+ +P+ E+ + ++ Q+ Sbjct: 640 PKPLPGWL---LSAEVKRGSK-TLGWVAQLHPSRARELDARSPVFVAELAISAL---QQG 692 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF---QGK 756 K L + RD+A V + + + + L ++FDVF G+ Sbjct: 693 AQGVAKFSDLPRFPSITRDVALEVPADLATAKVAAFFSTLKEPLFAGASLFDVFTDTTGQ 752 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L KKSVA + + T ++ R+++ +V A +R Sbjct: 753 KLASDKKSVAWCLTYRASDRTLAAKEVDEAHARVLKTLVGTLPATIR 799 >gi|119486585|ref|ZP_01620635.1| phenylalanyl-tRNA synthetase, beta subunit [Lyngbya sp. PCC 8106] gi|119456202|gb|EAW37334.1| phenylalanyl-tRNA synthetase, beta subunit [Lyngbya sp. PCC 8106] Length = 821 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 231/840 (27%), Positives = 437/840 (52%), Gaps = 55/840 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ +D +++ E++ +TLT G EVE +++R + ++ K+L +P+ D Sbjct: 1 MRISLNWLRELVDIEMTPEQLAETLTIAGFEVEDIEDRSTWADGVVLGKILEATPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGAPN + L+ A G+ +P+ ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGNSEPLNIVCGAPNAKADLIVAVATIGTYLPQVDLKLKKTKLRGVPSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DS I ++ P +G + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLAELGLEKDSDGIHAFNLENPQLGTDIRPLLGLDDVILDVTATANRADGLSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 + A L+ + L + L++ D+ +S C + ++G++ +P W++Q Sbjct: 181 IAALTAASLRIPEATGLLIEDKKASLKLAVDVSESQACPIYTGTIIEGIKIAPSPQWLKQ 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL+A G+R I+ +VDITNY+ L+ G P H FD R+ + + VR SGE + Sbjct: 241 RLQASGVRPINNVVDITNYIMLEWGQPLHAFDLDRLQKITASEDLTIGVRLGKSGESLKT 300 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+Q L + ++I ++ + ++AGI+GG+ + + T ++++E A++ + I RS + Sbjct: 301 LDSQTRKLKDETLLITANNQPIALAGIMGGEDSEVYEETQNLMLEAAVFSSVAIRRSARG 360 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI------TYKPRK 403 G+ T++ RFERGV+ ++ +SLI L GG ++ A ++ + P + Sbjct: 361 QGLRTEASTRFERGVNPAELVLACCRAISLITELAGGVSTQQESASSVVDDVTSSQVPLR 420 Query: 404 IVFMNSEVKRLS-GIDVPIEDSLR------ILERLGFSVIGEYDKFE-------VSVPSW 449 + +N + L G + +E L+ IL LG ++ + E V+VP++ Sbjct: 421 LSRINQILGSLKRGENTLVESFLQPEEVEGILTALGCGLMRQTPIKENKDVVWTVTVPAY 480 Query: 450 R-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 R +D+E + DL+EE+ R+YG D S+ LP V L+ Q R+++ + + Sbjct: 481 RARDLEREIDLIEEVARLYGYDNF-SDTLPHQSVPGY--LTEDQLALRHLRAAFRAEGLT 537 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E++++S + +E G+ ++ I NP+ + S +RT +L GL+ A N++ Sbjct: 538 ELMHYSLVKQE-------GENQVVISNPLFVEYSALRTEMLSGLIDAFAFNLENGNGPLN 590 Query: 569 IFEVSHVYENDTPEGQKYMA-AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 FE+ V+ +T Q+ A AGI G + +G W+ E+ + F+AK + Sbjct: 591 GFEIGRVFWKETETFQEKDAIAGIIGGDT-TQGH---WTRGGREQP--ITWFEAKGILEA 644 Query: 628 VIEP-FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 + + ++S++ + P HPGR+ + + LG FG+ HP + + L + Sbjct: 645 IFKRLYLSVEYQKETKIKP--LHPGRTASLWLNGN-HLGVFGQLHPQLQEQRDLPKDVYL 701 Query: 687 FEVYLDSIPISQKKRTK-TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLI 744 FE L + + + T+K S+ P RD+AF V + + L +IK L+ Sbjct: 702 FEFNLSVLVEAMTQGDNLTRKFGSFSTFPPSDRDIAFFVAEEVSVADLEKCMIKAAGNLL 761 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + +FD ++G+ + E ++S+A +++ + T ++++ ++ E +VK+ N LRS Sbjct: 762 ESIKLFDEYKGEHVPEDQRSLAFRLVYRASDRTLTEEEVEPKQQKVREALVKQFNVNLRS 821 >gi|118467858|ref|YP_888071.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium smegmatis str. MC2 155] gi|118169145|gb|ABK70041.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium smegmatis str. MC2 155] Length = 832 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 256/863 (29%), Positives = 417/863 (48%), Gaps = 90/863 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL++ + D DV+ E++ T IG EVE++ +S P T+ +V+ +E Sbjct: 1 MRIPYSWLREAVRAGAPDWDVTPEELEQTFIRIGHEVEEIITAGPVSGPLTVGRVIEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQ----EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + I ++D G +VCGA N VG L V A PG+ +P + ++ RK Sbjct: 61 LTEFKKPIRACKVDVGDQNVDGAPRDIVCGARNFAVGDLVVVALPGTTLP-GDFTISSRK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL D + I+ LP A G +D L L D + +++TP+R Sbjct: 120 TYGRLSDGMICSAAELNFGTDHSGIIVLPPGTAEPGAPAADVLGLDDVVFHLAVTPDRGY 179 Query: 168 CIGVRGIALDLVAAGLGKLKEINIS----CPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ VRG+A ++ A L ++++ P+ E+ PL ++ + + F + V Sbjct: 180 CLSVRGLAREIACAF--DLDYVDLADVEPLPVEGEAWPLTVQ----PGTGVQRFGLRPVT 233 Query: 224 GV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ V+P WM++RL G+R+IS VD+TNYV L+ G+P H D+S I+ VR A Sbjct: 234 GIDPAAVSPWWMQRRLLLSGIRAISPAVDVTNYVMLEFGHPMHAHDSSLITGAFDVRFAR 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GEK++ LD+ E L+ +V+I D +I G++G + TTDVL+E A+WDP Sbjct: 294 DGEKVVTLDDVERTLNSGDVLIVDDVATAAIGGVMGAGTTEVRETTTDVLLEAAVWDPAA 353 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNIT 398 ++R+ + L + +++ R+ER VD + L SL+ + GGT +D Sbjct: 354 VSRTQRRLHLASEAGRRYERSVDPAISVAALDRCASLLAEIAGGTVQPKLTDWRDGDRED 413 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV--PSWRQDVEEK 456 + + R +G+D P + R L ++G +V E D ++V PSWR D+ + Sbjct: 414 WSGPAVRIAADLPDRTAGVDYPAGTTARRLTQIGATVT-EADPGVLTVVPPSWRPDLRQP 472 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + + LA +E++ F+ Sbjct: 473 ADLVEEVLRLEGLEIIPSV---LPTAPAGRGLTPVQKRRRAIGKSLALAGFVEILPTPFV 529 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G +R ++LNP+ +D ++ T+LLPGLL+A RNV R AD A+F Sbjct: 530 PAGVFDLWGLPADDQRRRTTQVLNPLESDRPHLATTLLPGLLEALSRNVSRGAADVALFG 589 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 + V + P +++A AG+R+ +G G G Sbjct: 590 IQQVVQPTDATKAVERVPTDRRPTDEEIAALDASLPRQPQHVAAVLAGLRE-PAGPWGPG 648 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 R D F +A+ VI ++ F + +HPGR I + Sbjct: 649 R--------PTEAADAF----EAVRVIGRAAGVE-FTFRAAQELPWHPGRCAAILIG-DT 694 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 V+G+ GE HP +++ GL C E+ LD++PI + +S V +D++ Sbjct: 695 VVGHAGELHPAVIERSGLPKRTCAVELDLDAVPI-----VEILPAPQVSPFPAVFQDISV 749 Query: 723 I-VDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 I D A + + L++DV +FDV+ G +GEG+KS+ + + + T +D Sbjct: 750 IVDDDVAAADVVAAVRDGAGELLEDVRLFDVYTGPQIGEGRKSLTLALRFRATDRTLTED 809 Query: 782 DIRILMDRIVENVVKKTNAVLRS 804 + D V ++ AVLR Sbjct: 810 EASAARDAAVAAASERVGAVLRG 832 >gi|315030718|gb|EFT42650.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4000] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVSHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QGK Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGK 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+ + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMTYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|256958613|ref|ZP_05562784.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis DS5] gi|257078033|ref|ZP_05572394.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294780987|ref|ZP_06746339.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|307268770|ref|ZP_07550138.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|256949109|gb|EEU65741.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis DS5] gi|256986063|gb|EEU73365.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis JH1] gi|294451933|gb|EFG20383.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis PC1.1] gi|306514898|gb|EFM83445.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4248] gi|315031594|gb|EFT43526.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0017] gi|315034964|gb|EFT46896.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0027] gi|323480355|gb|ADX79794.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis 62] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLKDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|257082921|ref|ZP_05577282.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis E1Sol] gi|256990951|gb|EEU78253.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis E1Sol] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKSYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|57866642|ref|YP_188305.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus epidermidis RP62A] gi|242242438|ref|ZP_04796883.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis W23144] gi|66773840|sp|Q5HQ35|SYFB_STAEQ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|57637300|gb|AAW54088.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis RP62A] gi|242234145|gb|EES36457.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus epidermidis W23144] Length = 800 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 242/826 (29%), Positives = 415/826 (50%), Gaps = 49/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ D S++ + + +T G+EV+ + D + + + VLS +P+ D Sbjct: 1 MLISNEWLKDYVNVDQSVQALAERITRTGIEVDDIIDYTKDIKKLVVGHVLSKTPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVDLGEEEPVQIVCGAPNVDEGQHVIVAKVGGRLP-GGVKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + I P G + L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSHVTPKNYESGIYVFPEAVKPGTDALEALYLNDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + ++ S ES E+ ++ + ++ V V +P Sbjct: 180 GTAYEVAALYQTKMNKPQLTSNESQESAKDELTIEVKNEDKVPYYSARVVHDVTIGPSPV 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD +I S + VR+A E + LD Sbjct: 240 WMQFRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQEQIGSQSIEVRQAKKDETMRTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L ++VI + ++ G++GG + + T V+VE A++DP++I + + L Sbjct: 300 GEERRLLDTDIVITNGKDPIALGGVMGGDFSEVTEQTRHVVVEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-------KPRKI 404 + ++S RFE+G+ + + V L AS + I+Y P KI Sbjct: 360 LRSESSSRFEKGIATE----FVDEAVDRACYLLETYASATVLKDRISYGDLGSFVTPIKI 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +V R G ++ E+ + I E+LGF + V+VPS R+D+ K DL+EE+ Sbjct: 416 T--ADKVNRTIGFNLTDEEIIDIFEQLGFKTENKNGDIIVNVPSRRKDISIKEDLIEEVA 473 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D I S LP+ + L+ +Q +TR VK L + + + +S +SK + F Sbjct: 474 RIYGYDDIPS-TLPVFKDVTSGELTDRQFKTRTVKETLEGAGLDQAITYSLVSKNHATDF 532 Query: 525 GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 R +E+L P+S S +R SLLP L+ A NV R + ++E+ V+ E + Sbjct: 533 ALQNRSTIELLMPMSEAHSTLRQSLLPHLIDAVSYNVARKNTNVKLYEIGRVFFGNGEGE 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 P+ +Y+ +GI G + W K E VD + K V E + D Sbjct: 593 LPDEVEYL-SGILTG----DFVNNKWQGKKEP----VDFYLTKGIVERVAEKLNLQFD-- 641 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F +G HPGR+ I+ + + + G+ GE HP + L FE+ D++ Sbjct: 642 -FRAGQIDGLHPGRTAIVSLNGKDI-GFIGELHPTLAANNDLKRTYV-FELNYDAMMEVS 698 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 + + V RD+A V+ + + L++II +N + +++D VFDV++G+ Sbjct: 699 VGYINYEPIPRFPG---VTRDIALEVNHEVTSSELLSIIHENGEDILNDTLVFDVYEGEH 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L +GKKS+AI++ ++T D+ + + D+I+E +KK A++R Sbjct: 756 LEKGKKSIAIRLSYLDTENTLTDERVNAVHDKILE-ALKKHGAIIR 800 >gi|255973161|ref|ZP_05423747.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T1] gi|257422967|ref|ZP_05599957.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|312951368|ref|ZP_07770266.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|255964179|gb|EET96655.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T1] gi|257164791|gb|EEU94751.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis X98] gi|295112700|emb|CBL31337.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus sp. 7L76] gi|310630628|gb|EFQ13911.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0102] gi|315144629|gb|EFT88645.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2141] gi|315153694|gb|EFT97710.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0031] gi|315156543|gb|EFU00560.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0043] gi|315158286|gb|EFU02303.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0312] gi|315160940|gb|EFU04957.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0645] gi|315168384|gb|EFU12401.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1341] gi|327534747|gb|AEA93581.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus faecalis OG1RF] Length = 807 Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|255654744|ref|ZP_05400153.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium difficile QCD-23m63] gi|296449489|ref|ZP_06891267.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296878188|ref|ZP_06902202.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] gi|296261680|gb|EFH08497.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium difficile NAP08] gi|296430804|gb|EFH16637.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium difficile NAP07] Length = 797 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 243/832 (29%), Positives = 412/832 (49%), Gaps = 62/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL+D++D D+ +++ D +T G +VE +D E + + K+L ++++P+ D Sbjct: 1 MLVSLKWLRDYVDIDMDVKEFADKMTMTGTKVETIDYYGEEIENILVGKILEIKQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA N+ G A GS +P + + RG S GMM Sbjct: 61 KLVVTKVDIG-DKVVQIVTGATNISEGDYIPVAVNGSKLP-GGVEIKQTDFRGELSDGMM 118 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + + I++ +G + D L L+D +ID LT NR DC Sbjct: 119 CSAAELGIDEHYIEEYKRGGIYILDHEDSYELGKDIKDVLGLNDALIDFELTSNRPDCKC 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + GIA + A K+K I S E I + K ++D+ LC+ + V V+ + Sbjct: 179 MLGIAREAAATIGTKVKYPEIEVKESDEEI--DFKVEIDNPDLCRRYVARMVTDVKIEPS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++RL G+R IS +VDITN+V L+ G P H FD +++ + + VR A GEK++ Sbjct: 237 PYWMQRRLTEAGVRPISNIVDITNFVMLELGQPLHAFDINQVETGRIVVRTAKDGEKLVT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E L D +VI + + +AG++GG ++ D+T VL E A + P NI + K Sbjct: 297 LDDVERTLDKDMLVITNGEKSLGLAGVMGGANSEITDDTKTVLFESANFKPENIRMTAKK 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 +GI +++ R E+ +D L+ L G + +P+K+V Sbjct: 357 VGIRSEASSRNEKDLDPNLAEIAANRAAQLVEMLGAGKVLKGVVDVYPNKPEPKKLVVNP 416 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + L G+DVP+E + ILE L F +++ + DK E+ VPS+R D+E++AD+ EEI RI Sbjct: 417 QRINHLLGVDVPMEQFVGILESLEFKCNLVAD-DKLEIDVPSFRTDMEQEADVWEEIARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFISKEQ--- 520 YG + I P Q+E ++ S+ +++ K + + E++ +SF+S + Sbjct: 476 YGFENI-----PSVQLEGNTTAGIKTSKQKFMDALKDNSTAVGLNEILTYSFVSPKGVDK 530 Query: 521 -SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 V G +R ++LNP+ + S MRT+L+P +L NV I + + FE H++ Sbjct: 531 IRVPEGNVKRNFVKLLNPLGEETSVMRTTLIPNMLDVLSTNVSHKIEEVSAFECGHIFIP 590 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 +++ P+ + M G+ + VD F K + I V Sbjct: 591 QDSELPKEENRMCVGM--------------------YGKDVDFFVLKG-TIETILVNVGF 629 Query: 636 DSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E + +HPGR I + + V G GE HP++++ + L + E+ +D + Sbjct: 630 KGYEIEPQDNNTTFHPGRCAKIVYNNKYV-GTLGELHPDVIENYNLGQRVYVAEIDIDFV 688 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF 753 +TK V L RD+A IV + + +IIK N L++ +FDV+ Sbjct: 689 ---FDNSDRTKNYVPLPKYPSTSRDIALIVKDDVFVKQIEDIIKENGQGLVESYKLFDVY 745 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 +G + G KS+A + + T D+++ + D+I+ + +K NA LRS+ Sbjct: 746 KGSQIEAGYKSIAYSITYRSKDKTLTDEEVAKVHDKILSELSEKLNANLRSN 797 >gi|78189504|ref|YP_379842.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobium chlorochromatii CaD3] gi|91208233|sp|Q3AQC6|SYFB_CHLCH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78171703|gb|ABB28799.1| phenylalanyl-tRNA synthetase beta subunit [Chlorobium chlorochromatii CaD3] Length = 803 Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 241/825 (29%), Positives = 410/825 (49%), Gaps = 46/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKI--CDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPD 57 MK ++SWL++ L + S E + + LT +G EVE V+ +L +V +VL E +P+ Sbjct: 1 MKISISWLREFL-PNFSCETVSLVERLTFLGFEVEGVEESASLDRRIVVGRVLETEPHPN 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PE-NNMIVNVRKIRGIE 113 + + +D G+ + +++VCGAPNVR G++ A + + P+ + + KIRG Sbjct: 60 AERLTLCLVDVGREEPLRIVCGAPNVRAGMVVPVATEKAKLQFPDGQTLTIKPSKIRGER 119 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+C+ EL LS+D + +MEL +G +DYLE SD ++D+++TPNR D + G Sbjct: 120 SQGMICAADELGLSNDHSGVMELESSWEIGKPFADYLE-SDVVLDIAVTPNRPDVLSHLG 178 Query: 174 IALDLV-AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 IA +L A L + +++ + E I + +D+ C + ++GV +P Sbjct: 179 IARELADGAPLQYPSQQSLTYQPAGERIAI------NDAVACPYYTGVIIRGVTIRESPE 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALD 291 W+R+RL+A+GL + +VDITNY+ G P H FD ++++ + + VR C E ++AL+ Sbjct: 233 WLRKRLQAIGLNPKNNIVDITNYMLHALGQPMHAFDCAKLAGERIAVRSDCQAE-VVALN 291 Query: 292 NQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 N Y + VI G I +IAG++GG + ++TTD+ +E AL+ P + R+ K L Sbjct: 292 NLTYKVEGGMPVICDGSGAIAAIAGVMGGMASAVTESTTDIFLESALFHPSMVRRTAKKL 351 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 + +DS YRFERGVD + + V+LIL L GGT ++ + + Sbjct: 352 ALASDSSYRFERGVDSRMVQQASATAVALILELAGGTVECAMEQGSVAADLQLLALRPER 411 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +L G + E + +LER+GF + + ++ +VPS+R DV + DL+EE+ R+YG Sbjct: 412 TNKLLGTALSGEQMVELLERIGFRCVEQTTEQLLFAVPSFRVDVTAEIDLIEEVARLYGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + I+S T KR +++ L + E++ I + + L ++ Sbjct: 472 NAIESSRQMATIYPTKRQHP--AYFPDFLRGELITLGFREILTNPLIKRNDAAL--ASEQ 527 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--DTPEGQKYM 587 +++LNPIS + +R SLLPGLLK N+ D +FEV+HV+E + Q+ + Sbjct: 528 LVDVLNPISEGLEVLRPSLLPGLLKVISHNIRHGNRDQKLFEVAHVFEAKPQVQQTQQPL 587 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS- 646 + + +G + + VD +D ++E LD PS Sbjct: 588 EGYCEQERLVMAITGSRYLRRWNHPTDMVDFYDLSGAVEMLLEQLNILDKSVVNIYTPSA 647 Query: 647 ------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G+ + LG + L F + EVY + ++ + Sbjct: 648 LSIDVFLTEKGKRTTHR------LGIMQPVNAAWLKHFDIEQ-----EVYCAELDVALLE 696 Query: 701 R--TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSL 758 R T S V+RD++FI+ + + A +LV ++++ + LI VTVFD F+ Sbjct: 697 RCYQPTSAYEPPSRFPVVERDISFIIPEGVSAQSLVELVQSSNPLIKTVTVFDRFERNHE 756 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + S+A+ + I K T +D+ I ++ I N K AV+R Sbjct: 757 SGKECSIALSLTIADAKATLQDEKINDILATISRNAESKLGAVIR 801 >gi|315150313|gb|EFT94329.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0012] Length = 807 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA S E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATSAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N++I + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIIITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKASAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ + + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGITYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|148381079|ref|YP_001255620.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A str. ATCC 3502] gi|153934178|ref|YP_001385452.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum A str. ATCC 19397] gi|153937460|ref|YP_001388859.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum A str. Hall] gi|168179625|ref|ZP_02614289.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum NCTC 2916] gi|226950560|ref|YP_002805651.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A2 str. Kyoto] gi|148290563|emb|CAL84692.1| phenylalanyl-tRNA synthetase beta chain [Clostridium botulinum A str. ATCC 3502] gi|152930222|gb|ABS35722.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A str. ATCC 19397] gi|152933374|gb|ABS38873.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A str. Hall] gi|182669486|gb|EDT81462.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum NCTC 2916] gi|226842816|gb|ACO85482.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum A2 str. Kyoto] Length = 793 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 244/834 (29%), Positives = 421/834 (50%), Gaps = 73/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++ D D Sbjct: 1 MKVPVKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIVEIRKHLDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKEENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D P+G + L++ II+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPIGEDIKKVLKMESSIIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SESI +K ++ D+ LC+ + +K V+ +P WM Sbjct: 180 E-TAATLNKKYTIPVVEFSPKCSESIEDSLKVEVKDA-LCRRYMARGIKNVKVEQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIKTNTIVVERAKEGEKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R +IAGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAIAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + + LI L G + + + N +P + ++ + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYEN-KLEPHMLEVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ E+ L+RL + + + E+ VP++R D+ K D+ EEI RIYG + Sbjct: 417 NKFLGTNISKEEMQEFLDRLDLNTEIKGEILEIHVPTFRCDLNIKEDIAEEIARIYGYNN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFIS-------- 517 I P+T + +++++Q + V L + + + +++SF+S Sbjct: 477 I-----PITTI---KSVTMQAGKNEKQHLDDKVIETLMASGLNQSISYSFVSPKVFEKIN 528 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 KE S L ++ ++I NP+ D S MRT+ +P +++A RN R ++FE+ +Y Sbjct: 529 LKEDSNL----RKVVKIKNPLGEDFSIMRTTTIPSMVEALSRNYSRNNDYASLFEIGKIY 584 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + + G L+ D VD F+ K ++++ Sbjct: 585 IPKEDPTELPDEKNILTLG-------------LYGD--------VDYFNLKGIVENILDG 623 Query: 632 F-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + L+ + P+ +HPGR+ + + V G GE HP++ D + + E+ Sbjct: 624 LGIDNYKLKRQEENPT-FHPGRTAELYIKKDYV-GILGEIHPDVQDNYDIEERCYVAELN 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + K K+ L V RD+A IVD + + NIIKN +++ + + Sbjct: 682 LD---VLYKHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIHL 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 739 FDVYKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|300860090|ref|ZP_07106178.1| phenylalanine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|307274582|ref|ZP_07555762.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] gi|300850908|gb|EFK78657.1| phenylalanine--tRNA ligase, beta subunit [Enterococcus faecalis TUSoD Ef11] gi|306508734|gb|EFM77824.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX2134] Length = 807 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLKDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|187776948|ref|ZP_02993421.1| hypothetical protein CLOSPO_00492 [Clostridium sporogenes ATCC 15579] gi|187775607|gb|EDU39409.1| hypothetical protein CLOSPO_00492 [Clostridium sporogenes ATCC 15579] Length = 793 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 243/831 (29%), Positives = 419/831 (50%), Gaps = 67/831 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WL D++D D+S +++ D LT G +VE+V + + K++ + ++PD D Sbjct: 1 MKVPVKWLNDYIDIDISPKELGDRLTLSGSKVEEVVTTGDEIQNVVTGKIMEITKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D GK + IQ+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDIGKDENIQIVTAATNMKEMDIIPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+ D +M L D PVG + L++ +I+ +T NR DC+ V GIA Sbjct: 120 CSEEELGLAGDEPVYGLMILDQDTPVGEDIKKVLKMESSVIEFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA L K I + P SE+I ++ ++ D+ LC+ + +K V+ + +P WM Sbjct: 180 E-AAATLNKKYTIPVVEFAPKCSENIENSLRVEVKDT-LCRRYMARGIKNVKVDQSPGWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++RL G+R I+ +VDITN+V L+ G P H FD I ++ + V RA GEK LD Sbjct: 238 QERLLEAGVRPINNIVDITNFVMLELGQPMHAFDRKEIRTNTIVVERAKEGEKFTTLDET 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L D + I R ++AGI+GG ++ ++T ++++E A +D NI S K LG+ Sbjct: 298 ERELDVDILNIKDGDRTVAVAGIMGGLNSEVKEDTKEIILECANFDGTNIRISSKKLGLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VK 412 T++ RFE+ +D + + LI L G + + I+ +NS + Sbjct: 358 TEASSRFEKDLDPNLVELAMDRACKLIQELGAGEVMEGSVDVYENKLEPHILEVNSNWIN 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D+ E+ L+RL + + + EV VP++R D+ K D+ EEI RIYG + I Sbjct: 418 NFLGTDISKEEMQECLDRLDLNTEIKGEILEVHVPTFRCDLNIKEDIAEEIARIYGYNNI 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFIS---------KEQ 520 P+T ++ + + + R +V L + + + +++SF+S KE Sbjct: 478 -----PITTIKSVTMQAGKNEKQRLDDKVIETLMASGLNQSISYSFVSPKVFDKISLKED 532 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---- 576 S L ++ ++I NP+ D S MRT+ +P ++++ RN R ++FE+ +Y Sbjct: 533 SSL----RKVVKIKNPLGEDFSIMRTTTIPSMMESLSRNYSRNNDYASLFEIGKIYIPKE 588 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + PE + + G+ VD F+ K +++ + + Sbjct: 589 DPTELPEEKNIVTIGLYGA---------------------VDYFNLKGIVENIL-GGLGI 626 Query: 636 DS--LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 D+ L+ + P+ +HPGR+ + + V G GE HP++ D + + E+ LD Sbjct: 627 DNWKLKRQEENPT-FHPGRTAELYIKKDYV-GTLGEIHPDVQDNYDIEERCYIAELNLD- 683 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDV 752 + + K+ L V RD+A IVD + + NIIKN +++ + +FDV Sbjct: 684 --VLYRHSNVKKEYSQLPKFPAVTRDIAVIVDDTVLVQEIENIIKNGGGNILESIQLFDV 741 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++GK + EGKKS+A ++ + + T +D ++ + D+IV + K A LR Sbjct: 742 YKGKQIPEGKKSIAYSIVYRNAQRTLKDSEVNKVHDKIVRTLEHKLGAQLR 792 >gi|90961791|ref|YP_535707.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus salivarius UCC118] gi|90820985|gb|ABD99624.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus salivarius UCC118] Length = 805 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 239/826 (28%), Positives = 422/826 (51%), Gaps = 44/826 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL D++ D +++E++ + + +EV++ E L + K L V ++PD Sbjct: 1 MKVSTKWLNDYVKVDDLAVEELAEKIERTAVEVDETYRLEEGLKKIVVGKTLEVVKHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ++CGAPN+ + A G+ I N+ + K+RG S GM Sbjct: 61 DHLNICQVDVGEDEPIQIICGAPNIAANQKVIVALSGARIA-GNVKIKRGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +E+ S+ + I LP A G + +YL + + IIDV +TPNR D + + Sbjct: 120 ICALQEIGFSESVVPKEYADGIYVLPESAVPGEPVYNYLGMDEDIIDVDVTPNRGDMLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 RG+A D VAA G+ E+ + +E L I+ L D L + + + V Sbjct: 180 RGVARD-VAAVYGR--ELTLPMGTVNEDDGLHIEDYLSVKADKELAPAYKLRVIDNVTVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TNY+ +D G P H FD ++I S L VR A GEKI Sbjct: 237 PSPMWLQKRLWNAGVRPINNVVDVTNYILMDYGQPLHAFDYNKINSKELVVRLAEQGEKI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE +L ++VI + ++AG++GG + DDNTT V++E A++D +I ++ Sbjct: 297 TTLDDQERELQSGDIVITNGKDPIALAGVMGGANTEVDDNTTTVVLESAMFDSSSIRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVF 406 + + +++ RFER ++ + L + +LI L G A+ I ++I + + Sbjct: 357 RRENLHSEASMRFEREINRGTIEEALDYAANLIAKLGDGKVATGIAQEQDIDVQDTTVEI 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ + G D+ + D I ERLGF V +F V+VP +R D+ ADL+EE+ RI Sbjct: 417 SLEKINNVLGTDLSVSDVTDIFERLGFKVEENAGEFVVNVPPFRWDISIPADLIEEVARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KEQSVLF 524 YG D I + LP+ + + +Q R + +L + + + +++ + K + F Sbjct: 477 YGYDNIPA-TLPVGPTT-PGHYTYEQQVIRNTRAILEASGLTQAISYGLTTKVKAERFAF 534 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + E+ P+S+D + +R +L+ GLL N R + + A++E V+ +++ Sbjct: 535 EPAMKSTELDFPMSSDHTTVRMNLISGLLDDVSYNKARKVENVALYEQGRVFFRDEDSER 594 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P +++AA + + IE + W DK R VD + K ++++ + + Sbjct: 595 PREVEHVAAAM---TGLIEDA--TWHDKK----RPVDFYVIKGIVQNLLDKVGVGSRVVY 645 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + A HPGR+ I E + G+ GE HP + + L + FE+ L + Sbjct: 646 TATAEHEEMHPGRTANIYIDGEFI-GFVGEVHPTLAKEYNLDR-VYVFELDLQKV----M 699 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 + +K +V S P +KRD+A +V + I ++ IK N + V +FDV+ G+ Sbjct: 700 ELSKDPEVYEPVSKFPAIKRDIALLVAEDIQNSDIIKTIKENGGANLASVNIFDVYAGEK 759 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + G KS+A + + + T DD++ D++V + + AV+R Sbjct: 760 IDLGFKSLAYTLTFENKERTLTDDEVNKAFDKVVNKLQENYKAVIR 805 >gi|258592598|emb|CBE68907.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) [NC10 bacterium 'Dutch sediment'] Length = 805 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 235/824 (28%), Positives = 409/824 (49%), Gaps = 41/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +L WL D++D + ++++ LT G EV ++ R P IV ++ S+E +P D Sbjct: 1 MKVSLKWLSDYVDLVLPVQELAHRLTMCGTEVGGIEERGNGWPGIIVAQIASIEPHPAAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE----NNMIVNVRKIRGIEST 115 L + I +V GA N++VG +A G+ + + ++ +V V +I+G+ S Sbjct: 61 SLSLVGLEIPGERIAIVSGAGNLKVGDRVPFASVGASLIDAHTGHSTVVEVVQIQGVASR 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 G++CSE+EL LS+ ++ LP +A VG LS L D I+D+ +TPNR DC+G+ G+A Sbjct: 121 GVLCSERELGLSEAHEGVLILPDEAEVGSPLSAVL--GDTILDLEVTPNRPDCLGMLGVA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A L ++S + E++ ++ LC + V GV +P+W++ Sbjct: 179 REVAAITEAPLHPPDLSYREEGCDVRDEVQVEILAPDLCPRYGASVVHGVTVGPSPSWLQ 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQE 294 RL A G+R I+ +VD+TNYV L+ G P H FD I + VRRA GE + LD Sbjct: 239 TRLMAAGVRPINNVVDVTNYVMLEYGQPLHAFDYETIHGRRVVVRRATDGESLRTLDGLL 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 LS + +VIA R ++AGI+GG +T VL+E A + P +I +S + L + T Sbjct: 299 RTLSSEMLVIADANRPVALAGIMGGSETEVTPSTKSVLLESANFSPGSIRQSCRALRLRT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFMNSEVKR 413 ++ +RF++G+ L+ L++ +CGG A+ + A +P + +E++R Sbjct: 359 EASFRFDKGLPPITTTAALRRATKLLVEICGGKAARGLWDAFPAPREPMEFTLTPAELRR 418 Query: 414 LSGIDVPIEDSLRILE-RLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + GID+ +L RLGF + + V+ P+ R D++ ADLVEE+ R+ G D+I Sbjct: 419 VLGIDLTTAQMRDVLAGRLGFDCREDGNALRVTPPAHRSDIQISADLVEEVARLVGYDRI 478 Query: 473 KSEP----LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGG 526 + LP + R L T + +L + EV+ +S I + ++ G Sbjct: 479 PTTTLAGRLPDYPPQPMRCL------TERLSDLLVGCGLHEVITYSLIGRRLLNKMMSGR 532 Query: 527 GQRELE---ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 G + + NP++ D +R SLLP LL N+ + A +FE+ VY D Sbjct: 533 GAEMPDGYCLANPMTPDQEMLRMSLLPSLLDCLTNNLRQDEAGPRLFEIGRVYLPHHADL 592 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P+ ++ + G+ +G W + +D +D K +++ ++ Sbjct: 593 PQERQMLVIGM---------AGPTWPRQWSRTTAQLDFYDLKGVVEELLDRLELRETRFI 643 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + +HPGR+ + S ++ LG GE HP + F + P+C E L+ + + Sbjct: 644 QIADQQSFHPGRTTAVY-SRDVRLGVMGELHPAVARNFEVRVPVCLAEFDLEQLLSVIGE 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 R ++ ++RDLA +V + +P L ++ L++ V +FD+F+GK L Sbjct: 703 R--FLRIEPPPRFPAIRRDLALVVPERVPVADLFETVRQAGGSLLERVELFDLFRGKELP 760 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G KS + ++ + T D ++ + I++ + + T A LR Sbjct: 761 QGYKSCGVGLVFRSPDHTLIDAEVGQVESGIIQQLQQMTGARLR 804 >gi|312793466|ref|YP_004026389.1| phenylalanyl-tRNA synthetase subunit beta [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180606|gb|ADQ40776.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor kristjanssonii 177R1B] Length = 791 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 242/823 (29%), Positives = 419/823 (50%), Gaps = 53/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK +D D S++++ D LT G +VE + R E + + K+L + +P + Sbjct: 1 MKVSLEWLKSFVDIDCSVDELVDKLTMSGTKVEGYEKRLENIKNVVVGKILEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++DT K + + ++ A NV+ A PG+ + N ++V + +GI S GM+ Sbjct: 61 NLFVCKVDT-KDKILTIITAAKNVKPSSYVPVAKPGAVLA-NGKTIDVLEFKGIVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFSYADENGIFILEGMDDSMIGTDIKIALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK-FDLDDSSLCKGFAMCCVKGVRNNV 229 + GIA ++ A LK N++ + E + I ++ D +C+ + +K V+ Sbjct: 179 IVGIAREIAAILNKPLKFPNLNFKEADEPVKNYIDGIEIQDKKICRRYMGRVIKNVKIGQ 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A E+I+ Sbjct: 239 SPLWLRRRLVACGVRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLANDSERIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D+NTT VL+E A ++P + R+ + Sbjct: 299 TLDGVERVLRSSDIVIADEKRAIAVAGVMGGLDTEVDENTTLVLLESATFNPAMVRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAELAIQRACALIEQIGAGEVVKGAVDTYVDLWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEKADLVEEILR 465 S +++L G+ + + L IL RL EYDK + +P +R D+E+ AD+ EE++R Sbjct: 419 FSYIEKLLGLRIEKGEVLNILSRLEI----EYDKEKEVFIIPPFRTDIEDMADISEEVIR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ S + L+ +Q +K LA+ E+ ++SF S + + Sbjct: 475 IYGYDKLPSRVFMGNAISS--GLTQKQKMVNNIKNFLANSGYYEIYSYSFESPKVYEVLK 532 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPE 582 G + ++I NP+ D S MR LL +LK N+ R I D +FE+S V+ ++D Sbjct: 533 GYNLDDAVKISNPLGEDFSIMRMQLLSSILKTIYLNISRNIKDVKVFELSTVFKKSDEKL 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+ + I GSS D + +LFD + + ++F S Sbjct: 593 PQEKLVLAI--GSSA--------QDFYSLKGVLENLFD-----------MLRIKDVKFSS 631 Query: 643 GAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP RS I T ++GY GE HP+IL+ F + + EVY+D + ++KK Sbjct: 632 QHQNPNLHPTRSAKIYTDESFLIGYIGEVHPDILERFDIPARVVYAEVYIDKLLEAEKKE 691 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGE 760 K+ L V+RD AF+V + + + I K ++++ +FDV++G+ + Sbjct: 692 ---KRYAPLPKYPAVERDYAFVVPDDVESRVIEEIFKKYSSDILEEFRLFDVYKGQQIKP 748 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS A + + + T D DI + ++I++ +K N LR Sbjct: 749 GFKSYAYKAVFRSKSKTLSDSDINQIQEKILDE-LKNYNISLR 790 >gi|319892128|ref|YP_004149003.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus pseudintermedius HKU10-03] gi|317161824|gb|ADV05367.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus pseudintermedius HKU10-03] Length = 801 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 233/809 (28%), Positives = 406/809 (50%), Gaps = 38/809 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL+ ++D DVS+E + + +T G+EV+ + D + + + V + +PD D Sbjct: 1 MLISKEWLETYVDLDVSIEALAERITRTGIEVDDIQDFTKEIKNLVVGYVEEIAPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNICQVNIGEEAPVQIVCGAPNVGAGQTVIVAKVGGRLP-GGIKIKRAKLRGQVSEGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ L + I + G L L D +++ LTPNRSD + + Sbjct: 120 CSLQEIGLPSNVVPKKFEDGIYQFATAIEPGTDALKALYLDDQMMEFDLTPNRSDALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A + A ++++ + ++ + ++D++ ++ V+ V+ +P Sbjct: 180 GTAYEAAALYDKQVRKPETTVTAQPKAAHEILTVKVEDTTQVPYYSARVVENVQIAPSPE 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S+ + VR A EK+ LD Sbjct: 240 WMQARLMKAGIRPINNVVDISNYVMLEYGQPLHMFDKDHIGSNDIVVRLAHENEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +QE +L ++VI + + ++ G++GG + T +V+VE A+++P+ I + + L Sbjct: 300 DQERELLSSDIVITNGQQPIALGGVMGGDFSEVTPETKNVVVEGAIFNPVAIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ +L G D + ++ I + Sbjct: 360 LRSESSSRFEKGIATEFLDEAVDRACFLLETLAQGQVLDGRVTDGDLGALVTDITITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G D+ D +R+ E+LGF+ + V VPS R+D+ +ADL+EEI RIYG D Sbjct: 420 VNRTVGFDLTEADIVRVFEQLGFNTEITNNDIHVKVPSRRRDITIEADLIEEIARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS-VLFGGGQR 529 I S LP+ + L+ +Q +TR VKR L + + + +S + +E++ + Sbjct: 480 NIPS-TLPVFEDVTSGALTDRQRKTRVVKRTLEGAGLSQAITYSLVDRERATAFTTTTHQ 538 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT-PEGQK 585 +E+L P+S S +R SL+P L+ AT NV R D A++E+ +V+ E T PE + Sbjct: 539 TVELLMPMSEAHSTLRQSLIPHLIDATQYNVARKNQDIALYEIGNVFFGQEGQTLPEQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G E W K E VD + K ++E +LRFE Sbjct: 599 YL-SGIMTG----EYVSNPWQGKKE----VVDFYLVKG----IVERIADQLALRFEYETT 645 Query: 646 S--WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ + + E +G+ GE HP + + L FE+ + I ++ Sbjct: 646 QIDGLHPGRTAAVTLNGE-AIGFIGELHPTVAKTYDLGRTYV-FELNYEKI---MQQSVG 700 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 + V RD+A +V + A +LV+ I +N ++ D VFDV++G+ + GK Sbjct: 701 YINYQPIPKFPGVTRDIALVVASEVRAASLVHTIHQNGGAILKDARVFDVYEGEHMEAGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 KSVAI++ +T ++ + + + I+ Sbjct: 761 KSVAIRLTYLDENNTLTEEQVTKVHEAIL 789 >gi|150007874|ref|YP_001302617.1| phenylalanyl-tRNA synthetase subunit beta [Parabacteroides distasonis ATCC 8503] gi|149936298|gb|ABR42995.1| phenylalanyl-tRNA synthetase beta chain [Parabacteroides distasonis ATCC 8503] Length = 820 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 255/845 (30%), Positives = 413/845 (48%), Gaps = 67/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++LD D+ E++ LTSIGLE VE+V + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYLDFDLEPEEVAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR--KIRGIE 113 + D I ++ G +Q+VCGAPNV G V A G+ + + + ++ KIRG+E Sbjct: 61 NSDHLHITTVNVGGEAPLQIVCGAPNVAAGQKVVVAVNGTKLYDGDECFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP DA VG DY + SD +++V +TPNR D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPADAVVGTLAKDYYNVKSDYVLEVDITPNRVDATSHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A K + P + E+ +E+ ++++ C ++ +KGV Sbjct: 181 GVARDLAAYLKQNGKPAELRRPSVDAFKIDDETPGVEVV--VENTEACPRYSGVTIKGVT 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ RL+ +GLR I+ +VDITN++ + G P H FDA +I + + V+ A +G Sbjct: 239 VKESPEWLQNRLRVIGLRPINNVVDITNFILHELGQPLHSFDAGKIKGNKVIVKAAEAGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E L+ +++I + I G+ GG +G + TTDV +E A + P I + Sbjct: 299 KFVTLDGVERTLTDRDLMICNVEEPMCIGGVFGGLDSGVTEETTDVFLESACFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG----GTASDICIARNITYKP 401 + + G+ TD+ +RFERG+D + VLK LI L G G D+ A +P Sbjct: 359 TARRFGLNTDASFRFERGLDPNNTMYVLKRAALLIQELAGGKITGAVQDVYPA---VAEP 415 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + ++ L G D+P+E IL L ++ E + + VP +R DV+ D++ Sbjct: 416 YTVEVTYEKINTLIGKDIPVETVKSILASLEMEIVSETAEGLTLHVPVYRIDVQRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 E+ILRIYG + ++ K NLS Q R + L E++N S Sbjct: 476 EDILRIYGYNNVEFSD------NVKSNLSYQTPTDRSWKLQNLISEQLCGCGFNEIMNNS 529 Query: 515 FISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S + E ++NP+SAD++ MR +LL G L++ N+ R + Sbjct: 530 LT---RSAYYTDLSVYPEAHCVMLMNPLSADLNCMRQTLLFGGLESIEYNMKRKKGNIRF 586 Query: 570 FEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKA 623 +E + Y+ D + + +A GI +G W+ E+ +++ KA Sbjct: 587 YEFGNCYDYNIDNKKEDETLAQFSEDYRLGIWVAGNRVENNWAHPDEKSS----VYELKA 642 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ V + + F + Y G S I T + LG G + + Sbjct: 643 YVENILVRLGVDMKRVIFGNLTNDIYSSGLS--ITTGSGRQLGTMGIVSKKLRKMLDID- 699 Query: 683 PICGFEVYLDSIPISQ-KKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 EVY + +Q K K KV +S VKRDLA ++D+ + + I K+ Sbjct: 700 ----MEVYYAELSWTQLMKEIKKAKVTFSEISKFPAVKRDLALLLDKSVQFSEVEKIAKD 755 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 DR L+ +V++FDV++GK+L GKKS A+ +Q T D I +M +I N+ +K Sbjct: 756 SDRKLLKEVSLFDVYEGKNLPAGKKSYAVSFFMQDESKTLNDKQIDAIMKKIQTNLEQKL 815 Query: 799 NAVLR 803 A LR Sbjct: 816 GAQLR 820 >gi|21673560|ref|NP_661625.1| phenylalanyl-tRNA synthetase, beta subunit [Chlorobium tepidum TLS] gi|30316240|sp|Q8KEF9|SYFB_CHLTE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21646671|gb|AAM71967.1| phenylalanyl-tRNA synthetase, beta subunit [Chlorobium tepidum TLS] Length = 810 Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 237/832 (28%), Positives = 412/832 (49%), Gaps = 53/832 (6%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +++WLK+ + + + D LT +GLEVE V ++ IV K++ V +P+ Sbjct: 1 MKISVNWLKEFVPSLSFDCSGLVDYLTFLGLEVEDVFEQKLPDQKVIVGKIVEVRPHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG---SCIPENNMIVNVRKIRGIES 114 D I +DTG+ + Q+VCGAPNV G++ A G + + + KIRG S Sbjct: 61 DRLRICMVDTGEGELRQIVCGAPNVEAGMMVPVATIGAVLTAVSGETFTIKPAKIRGEHS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 +GM+C+ EL LSDD +M L +G L+ YLE +D ++D+++TPNR D + G+ Sbjct: 121 SGMICAADELGLSDDHDGVMVLDEACEIGQPLARYLE-TDTVLDIAVTPNRPDALSHLGV 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A +L EI E ++ D C + +KGV +P W+ Sbjct: 180 AREL-----ADCNEIVYPQAPVIEFTRGGGLIEVQDEESCPYYTATVIKGVTVGPSPRWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +GLR + +VDITNY+ G P H FD +++ V R+ + +AL+ E Sbjct: 235 ARRLEQIGLRPKNNIVDITNYILHSFGQPLHAFDYHQLAGSRIVVRSDAESSFMALNKVE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y L P V+ +I G++GG H+ D TTD+L+E A ++P ++ ++ K L + + Sbjct: 295 YQLQPGMTVVCDAREPVAIGGVMGGLHSAVTDKTTDILLEAAYFNPASVRKTAKQLQLSS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YRFERGVD + ++ +++IL + GG ++ + + V + Sbjct: 355 DSSYRFERGVDPCNVKRAAEYAIAMILEIAGGNVDSAEAWGDMPAAQKIVSLRPKRVNAV 414 Query: 415 SGIDVPIEDSLRILERLGFSVIGE------YDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 G + +R+LE++ + + D SVPS+R D+E++ DL+EE+ R+YG Sbjct: 415 LGSSITASRMVRLLEKICIKAVSQEAVSDDVDSIAFSVPSFRVDIEQEIDLIEEVARLYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + ++ P+ ++ R + + Y++ ++ EV+ I K ++ F Sbjct: 475 YNNLEPAPVMVSSYPVSRKVP--EYFPDYLRSIMIGLNFREVLTNPLIRKAEADCF--SS 530 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG---QK 585 + +LNPIS ++ +R +L P LLK G N+ + +FEV+H +E G + Sbjct: 531 MLVNVLNPISEELEVLRPNLAPSLLKVVGYNMRHGNRELRLFEVAHGFEKQPEAGRGNEG 590 Query: 586 YMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++A + K + +GR W+ + E VD +D + V+E + E Sbjct: 591 PLSAFLEKELLSMVITGRREPRSWNRQDEN----VDFYDLRG----VVE-MLLEKLNLLE 641 Query: 642 SGAPSWYHPGRSGIIKTSAE------IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 A + Y+ GI TS E + G + + +LD FGL +VYL + Sbjct: 642 KSAFNIYNARTIGIEITSTENGKTSVLKAGTVQQVNREVLDVFGLDQ-----DVYLAELD 696 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVF 753 ++ +R V++ S V+RDL+F++ +HIPA L+++ K D + V +FDVF Sbjct: 697 VTLLERCFESGVIYEPPSKFPVVERDLSFVLPRHIPAQRLIDLAKASDPRVRSVRIFDVF 756 Query: 754 -QGKSLGE-GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G + GE +SVA+ + + T ++ I ++ ++++N + AV+R Sbjct: 757 DRGTTQGEPSTRSVALSLELADRSGTMNEEAISAVISKVIDNARSELGAVIR 808 >gi|224024457|ref|ZP_03642823.1| hypothetical protein BACCOPRO_01182 [Bacteroides coprophilus DSM 18228] gi|224017679|gb|EEF75691.1| hypothetical protein BACCOPRO_01182 [Bacteroides coprophilus DSM 18228] Length = 820 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 243/829 (29%), Positives = 407/829 (49%), Gaps = 35/829 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGGVEEVQSIKGGLEGLVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGA NV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAANVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP D G DY ++ SD +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTSHEGIIVLPQDVVPGTLAKDYYQIKSDYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ + P ++ ++I +++++ C +A +K V Sbjct: 181 GVARDLYAWLIQNGRQAELKRPSVDAFRVDNHDMDIAVEVENTEACPRYAGVTIKNVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I V + C+ G K Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPMHCFDADKIKGGKIVVKTCAEGTKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G ++T DV +E A + P + ++ Sbjct: 301 VTLDEAERTLSERDLMICNAEEPMCIAGVFGGLDSGTTESTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TDS +RFERG+D G+I LK L+ L GG AS+I + Sbjct: 361 RRHGLSTDSSFRFERGIDPNGVIYALKEAALLVKELAGGEIASEIKDNYPAPIADFAVEL 420 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 V L G +P E I+ L ++ E + + VP +R DV+ D+VE+ILR Sbjct: 421 SYDYVNSLIGKVIPAETVKSIVSSLEMKIVEETAEGLSLLVPPYRVDVQRPCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG + ++ + + K + V L E++N S + Sbjct: 481 IYGYNNVEIPTSVKSSLSVKGEVDKSVKLQNIVSEQLVGCGFNEILNNSLTAAAYYEGLE 540 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + E + ++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKPENLVRLMNPLSNDLNVMRATLLFGGLESIQHNANRKNADLKFFEFGNCYHFHAEKK 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ V+ L Sbjct: 601 NPE--KVLAAYSEELHMGLWLTGKRVSNSWAHADENSSVYELKAYVLNIFRRLGVNFGGL 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG I F + N EVY + + Sbjct: 659 VFGNLTDDIYSVAIS--VHTRGGKLLATFGVVCKKIQKAFDIDN-----EVYYADLNWKE 711 Query: 699 -KKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 K K V + +S VKRDLA ++D+ + + I D +L+ V +FDV++ Sbjct: 712 LMKAIKGNAVSYKEISKFPAVKRDLALLIDKKVQFAEIEKIAYETDKKLLKSVELFDVYE 771 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GK+L GKKS A+ ++Q T D I M +++ N+ K AVLR Sbjct: 772 GKNLEAGKKSYAVSFMLQDENATLNDKQIDKFMQKLIGNLQNKLGAVLR 820 >gi|297569211|ref|YP_003690555.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] gi|296925126|gb|ADH85936.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfurivibrio alkaliphilus AHT2] Length = 819 Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 257/842 (30%), Positives = 424/842 (50%), Gaps = 60/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFT +WL++++ D+ E+I LT +GLEV+ V+ A L+P + +V +V +P+ D Sbjct: 1 MKFTYNWLREYVAVDLGPEEIAARLTLLGLEVDAVEPLHAELAPVKVARVAAVHPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + +VVCGAPNVR G+ PG +P + + KIRG S GM+ Sbjct: 61 RLTLCDVEEGETELRRVVCGAPNVRAGMFSALVTPGMVLP-GGLKIKASKIRGERSEGML 119 Query: 119 CSEKELMLS---DDSASIMEL-----PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CSE+EL L+ D S IM+L P P G + L L+D +I+V LTPNR DC G Sbjct: 120 CSEEELGLAAEGDGSRGIMDLDPELFPGLKP-GIPFREALGLADTLIEVDLTPNRPDCTG 178 Query: 171 VRGIALDLVA-AGLGKLKEINISCPL-----SSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 V GIA ++ GL + ++ + L + + +P + + D C +A ++ Sbjct: 179 VIGIAREVAGFTGLPLKRPVDQAPGLPTPEQAGDDVPFTVSVEAAD---CHRYAARLLRN 235 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACS 283 VR +P WMRQRL+AVGLR I+ +VD+TN V L+ G P H FD R+S + VRRA Sbjct: 236 VRIAPSPPWMRQRLQAVGLRPINNVVDVTNLVMLEYGQPMHAFDFDRLSGGQIRVRRAAE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 EKI LD E +L+P +VIA R ++AG++GG + + ++L+E A ++ ++ Sbjct: 296 QEKITTLDGVERELTPAMLVIADADRAVAVAGVMGGASSEVGPESVNILLESACFEAKSV 355 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPR 402 + L + TDS YRFERGVD Q ++ V LI L G I R P Sbjct: 356 RATAAALKLNTDSSYRFERGVDPQLAPLAMERAVRLIQELAGAQVMPGGIDYRAGVQPPP 415 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE---YDKFEVSVPSWRQDVEEKADL 459 ++ V L G + ++ ++L G + GE + PS+R D+E + DL Sbjct: 416 ELTLRLPRVNDLLGTTLDLDSVEKVLA--GIEIRGERVDASTLRIIPPSFRVDLEREVDL 473 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ R+ G DQI + +P +E R R ++ ++ + E +N+SF++ Sbjct: 474 IEEVARLIGYDQIPAA-MPKVAMELP-PADPAAERRRRLRALMLAAGCCEAINYSFVNPA 531 Query: 520 QSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + +R L +LNP+S ++ MRTSLLPGLL+ N++ D +FE+ Sbjct: 532 HADTLRLDPEDQRRRALPLLNPLSEELGVMRTSLLPGLLENARHNINHQSPDLRLFELGK 591 Query: 575 VYENDT----PEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 V+ D P ++ +AA G R + + LW+ + VD+ D K L Sbjct: 592 VFYVDAGQELPREEEQLAAVFSGRRYPQAPL-----LWNGEEP-----VDIHDVKG-VLE 640 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV---LGYFGEFHPNILDFFGLSNPI 684 + +SL L+ A + + + E LG G+ P +L FG+ + Sbjct: 641 ELLAGLSLSGLQLVPAAAVPPYAVAGFQLSLNREATGEPLGEAGKIQPAVLKAFGIKQEV 700 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRL 743 ++ L + + K + + VK DLA +V + + AG ++ I+ +L Sbjct: 701 FYLDLNLTGLSHCRPAAVGFKPLPRFPA---VKWDLALLVPEEVEAGEMLAAIRQTGGKL 757 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ V +FDV++GK + G+KSVA + + + T D + ++ +I++ + ++ + LR Sbjct: 758 LEQVEIFDVYRGKHIEPGRKSVAFAIQYRDAEQTLNDKKVGVVHGKIIKMLEQRFHGQLR 817 Query: 804 SS 805 + Sbjct: 818 EA 819 >gi|329576393|gb|EGG57906.1| phenylalanine--tRNA ligase, beta subunit [Enterococcus faecalis TX1467] Length = 807 Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEELARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLKDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|315148453|gb|EFT92469.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX4244] Length = 807 Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLKDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGWVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|168188124|ref|ZP_02622759.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum C str. Eklund] gi|169294042|gb|EDS76175.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum C str. Eklund] Length = 789 Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 244/825 (29%), Positives = 421/825 (51%), Gaps = 58/825 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M ++WLKD++D ++S +++ D LT G +VE+V + ++ K++ +E++PD + Sbjct: 1 MLVPINWLKDYVDINISPQELGDALTLSGSKVEEVIVTGDVINKVVTGKIIKIEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDVNSEEPIQIVTAATNMKEQDIVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 119 Query: 119 CSEKELMLSDDS--ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL + D +M LP + P+G + + ++L ID +T NR DC+ V GIA Sbjct: 120 CSEEELGIVGDEPVVGLMILPENTPLGREMKEVIDLEKASIDFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAA-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A G K +SE+I +K ++ D LC+ + VK V+ +P+WM+ Sbjct: 180 EVAATLGTSYRKPSTEYKVQNSENINNTLKVEVKDE-LCRRYMARGVKNVKIAPSPSWMQ 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL G+R I+ +VDITN+V ++ G P H FD I S+ + V RA +GEK + LD +E Sbjct: 239 ERLLEAGVRPINNIVDITNFVMIELGQPMHAFDRREITSNTIVVERAKNGEKFITLDEEE 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ D + I R ++AGI+GG ++ ++TT+V+ E A +D NI S K L + T Sbjct: 299 RELNEDILNIKDGDRTIALAGIMGGLNSEVKEDTTEVVFECANFDGTNIRVSSKKLNLRT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ +FE+ +D + + LI L G + I K V +NS + R Sbjct: 359 EASGKFEKDLDPNAVEEAMNRACHLIQELGAGEIMEGTIDVYGNKKETHTVTVNSTWINR 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+ E L+RL + ++VP++R D+ K D+ EEI RIYG + +K Sbjct: 419 FLGTDISKEQMKEYLDRLELLTEISGEDLVITVPTFRCDINIKEDVAEEIARIYGYNNVK 478 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------KEQSVLF 524 + +P + + Q + + V ++AS + + + +SF+S E S L Sbjct: 479 T-TIPSVETLRGGKSTKQLLQDKIVDTLIAS-GLNQSIAYSFVSPKVFDKILVPEDSEL- 535 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 ++ + I NP+ D S MRT+ +P ++++ RN R ++ +FE+ +Y EN+ P Sbjct: 536 ---RKVVTIRNPLGEDYSIMRTTSIPSMMESLSRNYSRNNSEVRLFEIGKIYIPNENELP 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 E + ++ G+ VD D K ++I+ ++ ++F Sbjct: 593 EERNIISLGMYGN---------------------VDYLDLKGVVENIIDEL-GVEKVKFQ 630 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ES PS +HPG++ + E + G GE HP++ + + + E+ +D I K Sbjct: 631 RESENPS-FHPGKTAALYIKKEFI-GVVGEIHPDVAEKYEVDERCYVAELNMD---ILLK 685 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 KK + L V RDLA I+D+ I + +IIKN +L++ +FDV++GK + Sbjct: 686 HTKIQKKYISLPRFPAVTRDLAVIIDRDILVQEIEDIIKNQGGKLLESAKLFDVYEGKQI 745 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + KKS+A ++ + + T D D+ + D+IV + K A LR Sbjct: 746 PDNKKSIAYSLVYRGDR-TLTDKDVNKVHDKIVRALEHKLGAELR 789 >gi|312622479|ref|YP_004024092.1| phenylalanyl-tRNA synthetase subunit beta [Caldicellulosiruptor kronotskyensis 2002] gi|312202946|gb|ADQ46273.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor kronotskyensis 2002] Length = 791 Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 424/824 (51%), Gaps = 55/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK ++D D S++++ D LT G +VE + R E + + K+L + +P + Sbjct: 1 MKVSLEWLKSYVDIDCSVDELVDKLTMSGTKVEGYEKRLENIKNVVVGKILEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++D K + + ++ A NV+ GL A PG+ + EN ++V + +GI S GM+ Sbjct: 61 NLFVCKVDI-KDKILTIITAAKNVKEGLYVPVAKPGAVL-ENGKTIDVLEFKGILSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFPYADENGIFILEGMDDSMIGNDIKIALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 + GIA ++ A LK N+S + E I I ++ D +C+ + +K V+ Sbjct: 179 IVGIAREIAAILNKPLKFPNVSFKETDELIKNYIDNIEIQDKKICRRYIGRVIKNVKIEQ 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A GEKI+ Sbjct: 239 SPLWLRRRLVACGIRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLASDGEKII 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D++T VL+E A ++P + R+ + Sbjct: 299 TLDGVERVLRSSDIVIADENRAIAVAGVMGGLDTEVDESTKVVLLESATFNPAMVRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAELAIQRACALIEQIGAGEIVKGAVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEKADLVEEILR 465 S +++L G+ + ++ + IL RL +YD+ + VP +R D+E+ AD+ EE++R Sbjct: 419 FSYIEKLLGLRIEKDEVVNILSRLEI----KYDEVKDVFIVPPFRTDIEDMADISEEVIR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ S + + L+ +Q +K LA+ E+ ++SF S + + Sbjct: 475 IYGYDKLPSRVFMGSAISS--GLTQKQKIVNNIKIFLANSGYYEIYSYSFESPKVYEILK 532 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTP 581 G + ++ILNP+ D S MR L+ +LK N+ R I D +FE+S V++ N+ Sbjct: 533 GYNLDDAVKILNPLGEDFSIMRMQLMSSVLKTVYLNISRNIKDVKVFELSTVFKKSNEKL 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +K + A GSS D + +LFD + + ++F Sbjct: 593 PHEKLVLA---IGSSA--------QDFYSLKGVLENLFD-----------MLRIKDVKFS 630 Query: 642 SGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 S + HP RS I T ++GY GE HP+IL+ F + + E+++D + Sbjct: 631 SQHQNPNLHPTRSAKIYTDESFLIGYIGEVHPDILERFDIPVRVVYAELFIDE---LLEA 687 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLG 759 + K+ V L ++RD AF+V + + + I K ++++ +FDV++G+ + Sbjct: 688 EKEEKRYVQLPKYPAIERDYAFVVPDDVESRVIEEIFKKYSSDILEEFRLFDVYKGQQIK 747 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G KS A + + + T D DI + ++I++ +K N LR Sbjct: 748 QGFKSYAYRAIFRSKSKTLSDSDINQIQEKILDE-LKNYNISLR 790 >gi|81300102|ref|YP_400310.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 7942] gi|93141320|sp|P74764|SYFB_SYNE7 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|81168983|gb|ABB57323.1| phenylalanyl-tRNA synthetase beta subunit [Synechococcus elongatus PCC 7942] Length = 810 Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 231/835 (27%), Positives = 422/835 (50%), Gaps = 56/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ + D+ E + + LT G EVE++++R + +V +VL E++P+ D Sbjct: 1 MRISLNWLRELVQVDLEPEVLAEKLTLAGFEVEEIEDRRTWAAGVVVGRVLEREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G+ + + +VCGA NVR + A GS +P ++ + K+RG+ S GM+ Sbjct: 61 RLSVCQVEIGQAEPVTIVCGASNVRADIWVAVATLGSYLPCIDLKLKPTKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL L+ +S I P DA G + L L D ++D++ T NR+D + + GIA Sbjct: 121 CSLSELGLTKESEGIHIFPEDAGLQAGQPVGPLLGLDDVVLDLTSTANRADALSLIGIAR 180 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 ++ A L + E L I S C ++ ++GV +P W+++ Sbjct: 181 EVRALTAATLTLPEVELQTYPELPCLAISLQ---SEACSHYSGTIIEGVTIAPSPEWLQK 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILA 289 RL+ G+R+I+ +VDITNY+ L+ G P H FD ++ + + VR A +GE + Sbjct: 238 RLQLAGIRTINNVVDITNYILLEYGQPLHAFDRQKLQAIAGSSDLAIGVRSAQAGETLKT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+QE L+ +VI + ++AG++GG + TT +L+E A ++PI + RS ++ Sbjct: 298 LDDQERTLAEAALVITAGDCPVALAGVMGGADSEVSQETTQLLLEAAWFEPIAVRRSARS 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 G+ T++ R+ERGV++ + + + L+L + GGT +A +P + + Sbjct: 358 QGLRTEASARYERGVNVTELPIATQRAIDLLLQIAGGTVISQTVATTTQTEPEHSITLR- 416 Query: 410 EVKRLSGIDVPIEDSLRILERLG-------FSVIGEY------DKFEVSVPSWR-QDVEE 455 ++R++ + P++ L+ LG + IG + ++V VP +R +D+E Sbjct: 417 -LQRINELLGPVQAEDEELKDLGADDIERLLTAIGCHLTLVDDAVWQVRVPPYRYRDLER 475 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 + DL+EE+ R+YG D PL D+ LS+ +S R ++ V + E+ ++S Sbjct: 476 EIDLIEEVARLYGYDNFGETLPPLGS--DEGALSIDESLRRQIRAVCRGVGLTELQHYSL 533 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + G R++ + NP+ A+ S +R LL GL+ A N ++ FE+ + Sbjct: 534 VKP-------GSDRQVHLANPLLAEYSALRLDLLSGLIDAFQYNWEQGNGPLWGFEIGRI 586 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + E + A G G + S W +E+ +D + AK + E F Sbjct: 587 FWR---EEDGFFEADRMGGILGGDPSRGRWQRGGKEQA--IDWYAAKGVLEEIFERFGL- 640 Query: 636 DSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE----VY 690 ++ F+ +HPGR+ + + LG FG+ HP++ + GL + FE V+ Sbjct: 641 -TIEFQPDRQDDRFHPGRTASLWLQGD-RLGRFGQLHPSLCEGRGLPAEVYAFELDLDVW 698 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTV 749 LD + Q +R + + SS RDLAF VDQ + L II+ L+ +V + Sbjct: 699 LDH--LDQPER-QVPRFQPYSSFPASDRDLAFFVDQSVTVAELERIIRRQGGALLSEVEL 755 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD + G+ + E ++S+A ++ + T + ++ + D++ +++V++ LRS Sbjct: 756 FDQYCGEHVPENQRSLAFRLTYRASDRTLTEAEVEPVHDQVRQSLVERFRVTLRS 810 >gi|288927514|ref|ZP_06421361.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] gi|288330348|gb|EFC68932.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella sp. oral taxon 317 str. F0108] Length = 820 Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 242/850 (28%), Positives = 426/850 (50%), Gaps = 77/850 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ +K + LTS GLEV+ V+ + L + +VL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQKTAEVLTSCGLEVDSVEEVQIIKGGLKGLYVGEVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D GK + Q+VCGAPNV G + A G+ + +N ++ K+RG+E Sbjct: 61 NSDHLHITTVDLGKGEPSQIVCGAPNVAAGQKVIVADVGAVLYDGDNEFVIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA VG ++Y +L SD +I++ +T N +D + Sbjct: 121 SFGMICAEDEIGVGTAHDGIIVLPADAKVGQPAAEYYQLESDWLIEIDITANHADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + E + P + + +P+++ + +D+ CK +A + Sbjct: 181 GVARDLYAWLVQNGYETTLKRPSCDAFVVDNNDLPIDVTIENNDA--CKRYACVSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L +GLR I+ +VDITNY+ + G P H FDA + + V+ G Sbjct: 239 VKESPEWLQNKLLTIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + + LD +E+ L P ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 RFVTLDGEEHTLGPSDLSICNAEEPMCIAGVFGGKGSGTYETTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---- 401 S + G+ TDS YRFERG+D G + LK L L GG S +++ +P Sbjct: 359 SARRHGLSTDSSYRFERGIDPSGTVYALKQAAILCKELAGGKIS--MEVKDVYPEPISDF 416 Query: 402 ---RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKA 457 K ++ + + G DV RI+ LG V+ E ++ ++ VP++R DV+ Sbjct: 417 DVDLKYAYVGQVIGKEIGNDV----IKRIVTSLGMQVVEETNEGLQLKVPAYRVDVQRPC 472 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNW 513 D+VE+ILRIYG + ++ +P TQ++ + + R ++ ++ + E++N Sbjct: 473 DVVEDILRIYGYNNVE---IP-TQLKSSLTVHGDEDREHKLETLIGEQLVGCGFNEILNN 528 Query: 514 SFISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 S + + G E +LNP+SAD+ MR +LL G L++ RN +R + Sbjct: 529 SLT---KVAYYEGLNNYTEDTCVKLLNPLSADLGMMRQTLLFGGLESLSRNANRQNQNLR 585 Query: 569 IFEVSHVYENDTPEG-----------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 FE + Y + +K++A + +EGS W +E+ F + Sbjct: 586 FFEFGNCYHYHADKANEESPIKAYSEEKHLALWLT--GKRVEGS---WI-HPDEQSSFYE 639 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV--LGYFGEFHPNIL 675 L + + + L L +E + + ++ ++V LGY + I Sbjct: 640 LNGYVENIFARLGIPAGL--LVYEKSENNIFTYALK-VMNRGGKVVAELGYVAD---GIR 693 Query: 676 DFFGLSNPICGFEV-YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 FGL+N + ++ + I ++ KK + K++ S V RDLA ++D+ + +V Sbjct: 694 KNFGLTNEVFFADLNWTALIKLTSKKDIEFKEI---SKFPAVSRDLALLLDKEVLFKDVV 750 Query: 735 NIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 + + +L+ V +FDV++GK+L +GKKS A+ ++Q T +D I +M +++ N Sbjct: 751 AVATQTEKKLLKKVELFDVYEGKNLPQGKKSYAVNFILQDENATLKDKQIESIMQKLIAN 810 Query: 794 VVKKTNAVLR 803 + K A LR Sbjct: 811 LKGKLGAELR 820 >gi|312876020|ref|ZP_07736009.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor lactoaceticus 6A] gi|311797218|gb|EFR13558.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor lactoaceticus 6A] Length = 791 Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 240/821 (29%), Positives = 418/821 (50%), Gaps = 49/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK +D D S++++ D LT G +VE + R E + + K+L + +P + Sbjct: 1 MKVSLEWLKSFVDIDCSVDELVDKLTMSGTKVEGYEKRLENIKNVVVGKILEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++DT K + + ++ A NV+V A PG+ + N ++V + +GI S GM+ Sbjct: 61 NLFVCKVDT-KDKILTIITAAKNVKVDSYVPVAKPGAVLA-NGKTIDVLEFKGIVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFSYADENGIFILEGMDDSMIGTDIKIALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK-FDLDDSSLCKGFAMCCVKGVRNNV 229 + GIA ++ A LK N++ + E + I ++ D +C+ + +K V+ Sbjct: 179 IVGIAREIAAILNKPLKFPNLNFKEADEPVKNYIDGIEIQDKKICRRYMGRVIKNVKIGQ 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A E+I+ Sbjct: 239 SPLWLRRRLVACGVRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLANDSERIV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D+NTT VL+E A ++P + R+ + Sbjct: 299 TLDGAERVLRSSDIVIADEKRAIAVAGVMGGLDTEVDENTTLVLLESATFNPAMVRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAELAIQRACALIEQIGAGEVVKGAVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S +++L G+ + + + IL RL E + F +P +R D+E+ AD+ EE++RIY Sbjct: 419 FSYIEKLLGLRIEKGEVVNILNRLEIKYDEEKEVF--IIPPFRTDIEDMADISEEVIRIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D++ S + L+ +Q +K LA+ E+ ++SF S + + G Sbjct: 477 GYDKLPSRVFMGNAISS--GLTQKQKMVNNIKNFLANSGYYEIYSYSFESPKVYEVLKGY 534 Query: 528 QRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQ 584 + ++I NP+ D S MR LL +LK N+ R I D +FE+S V+ ++D Q Sbjct: 535 NLDDAVKISNPLGEDFSIMRMQLLSSILKTIYLNISRNIKDVKVFELSTVFKKSDEKLPQ 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + I GSS D + +LFD + + ++F S Sbjct: 595 EKLVLAI--GSSA--------QDFYSLKGVLENLFD-----------MLRIKDVKFSSQH 633 Query: 645 PS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + HP RS I T ++GY GE HP+IL+ F + + EVY+D + ++KK Sbjct: 634 QNPNLHPTRSAKIYTDESFLIGYIGEVHPDILERFDIPARVVYAEVYIDKLLEAEKKE-- 691 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGK 762 K+ L V+RD AF+V + + + I K ++++ +FDV++G+ + G Sbjct: 692 -KRYAPLPKYPAVERDYAFVVPDDVESRVIEVIFKKYSSDILEEFRLFDVYKGQQIKPGF 750 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS A + + + T D DI + ++I++ +K N LR Sbjct: 751 KSYAYKAVFRSKSKTLSDSDINQIQEKILDE-LKNYNISLR 790 >gi|227541539|ref|ZP_03971588.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glucuronolyticum ATCC 51866] gi|227182695|gb|EEI63667.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glucuronolyticum ATCC 51866] Length = 842 Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 244/848 (28%), Positives = 406/848 (47%), Gaps = 79/848 (9%) Query: 10 DHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAIL 63 DH D V+ E + +G E E + E P +V ++E + P +C + Sbjct: 18 DHADWSVNSEDLDSGYVRVGFETEGYEPIEETTGPLVFGRVENIEELTGFKKPIRNCKVN 77 Query: 64 RIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 D E+Q ++CGA N + G L V + PG+ +P ++ RK S GM+CS Sbjct: 78 VGDANGTGELQNIICGARNFKEGDLVVISLPGTVLP-GGFKISARKTYDHVSEGMICSAA 136 Query: 123 ELMLSD-DSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 EL L+D + I+ LP D G ++ L L + + DV++TP+R + RG+ +L + Sbjct: 137 ELGLTDAQNKGIITLPDDFGTPGEPAAEKLGLKETVFDVNITPDRGYALSARGLTRELAS 196 Query: 181 A------GLGKLKEIN----ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 A + E+ + P ++ P++I +D + + F + V G+ Sbjct: 197 AFNLNFVDPAEDPEVAGLDLPAIPAATGHAPIDIS--IDPKTQTRRFGLRHVTGIDPEAE 254 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+++ L GLR I+A D+TNYV L G P H FDA +IS LT+R A GE A Sbjct: 255 SPYWLQRELMLSGLRPINAPTDVTNYVMLLLGLPMHAFDADKISGGLTIRNAQKGETFQA 314 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN-TTDVLVEVALWDPINIARSGK 348 +D+ + L ++VVI + QS+AG++GG + +DN TT+V E A+W+P+ +AR+ + Sbjct: 315 IDHTNHKLHEEDVVICDETGPQSLAGVMGGTTSEIEDNKTTNVFFEAAVWEPVRVARTSR 374 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 I +D+ R+ERGVD+Q + L +L++ + GG A+ +P I Sbjct: 375 RRKISSDASRRYERGVDVQLVEVALDIACALLVKIAGGEATGERFLYGEVAEPAPITMDI 434 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + ++G++ + + LE +G +V + V P+WR D++EK DLVEE+ R+ G Sbjct: 435 AYPSSVAGVEYGADAVVGRLEEIGATVTRDGGTLTVVPPTWRGDLQEKCDLVEEVTRLEG 494 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +D+I S +P+ D LS Q R R+V LA +E++ FI+ + +G + Sbjct: 495 LDKIPSI-IPVAPAGD--GLSQSQLRRRHVTHALAYNGYVEILPTPFIATDTFDTWGLDK 551 Query: 529 RE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN----- 578 + + + NP+ +D + + T+LLP +L A RNV R D A+F V V N Sbjct: 552 DDERRQVVTVQNPLESDRAVLGTTLLPSMLDAVRRNVVRGAHDLALFGVEQVAINHGDGK 611 Query: 579 -------------------DTPEGQKYMAAGIRKGSSGIE---GSGRLWSDKSEERCRFV 616 +T Q AA + G+ E G GR ++ F Sbjct: 612 SPMLDTSHRPSDEEVAHLRETLPSQPLYAATVGCGNEEFEGPWGEGRTYT--------FA 663 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 D ++ + +++++ + +HPGR I E+V G+ GE HP IL+ Sbjct: 664 DAIESARLVARAADVDITVENADYLP-----WHPGRCAAILVDGEVV-GHAGELHPQILE 717 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VN 735 GL C E+ + ++P + LS+ +D+A +VD+ +PA + Sbjct: 718 RLGLPKRTCAMEMNISALPFAPSAPAPV-----LSAFPTNLQDVALVVDEDVPAEAVRTT 772 Query: 736 IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + + L + V +FDV++ +SLGE KKS+A V + T D + VE Sbjct: 773 VQEGAGELAEKVELFDVYRSESLGENKKSLAFAVTFRAPDRTLTDGEASAARHAAVELAA 832 Query: 796 KKTNAVLR 803 ++ AVLR Sbjct: 833 ERHGAVLR 840 >gi|198275979|ref|ZP_03208510.1| hypothetical protein BACPLE_02162 [Bacteroides plebeius DSM 17135] gi|198271608|gb|EDY95878.1| hypothetical protein BACPLE_02162 [Bacteroides plebeius DSM 17135] Length = 820 Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 243/835 (29%), Positives = 412/835 (49%), Gaps = 47/835 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ LTSIGLE VE+V + L + +VL+ E +P Sbjct: 1 MNISYNWLKEYVDFDLTPDEVAAALTSIGLETGGVEEVQTIKGGLEGLVVGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ + +Q+VCGA NV G + A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGEPVQIVCGAANVAAGQKVIVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP D G DY + S+ +++V +TPNR+D Sbjct: 121 SNGMICAEDEIGVGTSHEGIIVLPADVVPGTLAKDYYNVKSEYVLEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + + + P ++ + I ++++ C +A +KGV Sbjct: 181 GVARDLYAWLIQNGHKATLKRPSVDAFKVDNHDMNIDIVVENTEACPRYAGVAIKGVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I V + C+ G Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPMHCFDADKIKGGKIVVKTCAEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + TTDV +E A + P + ++ Sbjct: 301 VTLDEVERKLSDKDLMICNAEEPMCIAGVFGGLDSGTTETTTDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TDS +RFERG+D I LK L+ L GG ASDI + Sbjct: 361 RRHGLSTDSSFRFERGIDPNITIYALKEAALLVKELAGGEIASDIKDNYPNPIADFAVEL 420 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 + V L G ++P E I+ L ++ E + + VP +R DV+ D+VE+ILR Sbjct: 421 SYNYVNSLIGKEIPAETVKSIVTSLEMKIVEETAEGLSLQVPPYRVDVQRPCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK------RVLASRAMMEVVNWSFISKE 519 IYG + ++ +P T K +LS++ + VK L E++N S + Sbjct: 481 IYGYNNVE---IPTTL---KSSLSVKGEVDKSVKLQNLVGEQLVGCGFNEILNNSLTA-- 532 Query: 520 QSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + + G + + ++NP+S D++ MR +LL G L++ N +R AD FE + Sbjct: 533 -AAYYDGLETYKPENLVRLMNPLSNDLNVMRATLLFGGLESIQHNANRKNADLKFFEFGN 591 Query: 575 VY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 Y E PE K ++ + G+ +G+ S+ +++ KA L++ Sbjct: 592 CYHFHAEKKNPE--KVLSGYSEELHMGLWITGKRVSNSWAHADENASVYELKAYVLNIFR 649 Query: 631 PF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 V+ SL F + + Y S + T +L FG I F + N + ++ Sbjct: 650 RLGVNFGSLVFGNLSDDIYSVAIS--VHTRGGKLLATFGVVCKKIQKAFDIDNEVYYADL 707 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 + + K T + K +S VKRDLA ++D+ + + I D +L+ V Sbjct: 708 NWKELMKAIKGNTVSYK--EISKFPAVKRDLALLIDKKVQFAEIEKIAYETDKKLLKSVE 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK+L GKKS A+ ++Q T D I M +++ N+ K AVLR Sbjct: 766 LFDVYEGKNLEAGKKSYAVSFMLQDENATLNDKQIDKFMQKLIGNLQNKLGAVLR 820 >gi|311113277|ref|YP_003984499.1| phenylalanyl-tRNA synthetase subunit beta [Rothia dentocariosa ATCC 17931] gi|310944771|gb|ADP41065.1| phenylalanyl-tRNA synthetase beta subunit [Rothia dentocariosa ATCC 17931] Length = 850 Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 246/836 (29%), Positives = 387/836 (46%), Gaps = 92/836 (11%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + D S E + TL +GLE E V E P + +VLS+E Sbjct: 1 MRIPLSWLREFAPVPADASAEDVLATLVKVGLEEEDVHRPTDEISGPIVVGQVLSLEPET 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N +VG V PG+ +P Sbjct: 61 HSNGKTVNWCQVRVVPEGQTQTLTGKGIEESGVQGIICGAHNFKVGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 N + RK G +S GM+ S +EL + +D I+ L +D +G + L L D Sbjct: 120 GNFAITARKTYGHKSAGMIASTRELGIGEDHGGILVLSTLGLDPELGSDALELLGLHDEA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLK----EINISCPLSSE---SIPLEIKFDLD 209 +V++TP+R +RGIA + A E P ++ S+ LE + Sbjct: 180 AEVNVTPDRGYAFSIRGIAREYAHATGTSFNDFVLEYGARAPKANSEGISVRLEDSAPIH 239 Query: 210 DSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 D+ F M V GV P WM RL+ G+RSIS VDI+NYV L+ G P H +D Sbjct: 240 DNPATIRFTMRQVNGVDATAPVPTWMASRLRLAGVRSISLPVDISNYVMLETGQPLHFYD 299 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A ++ + VRRA +GEK+ LD E DL P+++VI D + +AG++GG T Sbjct: 300 ADKVQGEIVVRRAVAGEKLTTLDGVERDLHPEDIVITDDSGVIGLAGVMGGASTEVTAET 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 ++L+E A +D ++IAR+ + +I+++ RFERGVD + + V L++ L G A Sbjct: 360 KNILIEAARFDEVSIARTARRHKLISEASKRFERGVDTKLQPAAAQRAVELLVELAAGVA 419 Query: 389 ----SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 +D+ I+R+ P I V G++ E + L +G V + V Sbjct: 420 DAGVTDVVISRD----PVVIDLPRDYVANRIGVEYSPEQIVNTLTEIGCEVEATATGYTV 475 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 PSWR D+ DL EEI R+ G + I P L + +Q+ R LA+ Sbjct: 476 KAPSWRNDLLAPEDLAEEIARLDGYENI---PYTLPVAPAGHGYTPEQAARRRAANALAA 532 Query: 505 RAMMEVVNWSFISKEQSVLFG---GGQR--ELEILNPISADMSNMRTSLLPGLLKATGRN 559 + EV + F+S+E + L+ G++ + + NPIS+ +R SLLPGL + RN Sbjct: 533 AGLTEVFAYPFVSEEANNLWSSPTAGEKVNSVRLANPISSAEGWLRRSLLPGLTEVLQRN 592 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK---------SE 610 + R + IFE V+ G R+GS+ I G SD+ E Sbjct: 593 LSRGFKNLKIFEAGRVF-----------IPGERQGSASIPPLGERPSDEVLADLNAGIPE 641 Query: 611 ERCRFVDLF-----------DAKA-------DALSVIEPFVSLDSLRFESGAPSWYHPGR 652 + F LF A+A DA +I + ++ + G +HPGR Sbjct: 642 QPVYFSGLFAGAEHEPMPGTQARAYDWRDALDAARLIADVLGVE-IVIAQGTHQAFHPGR 700 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + ++T +GY GE HP +L L C FEV + S R+ + + Sbjct: 701 TAQLRTQDGQTIGYAGELHPKLLQTENLPERTCAFEVNFTELFAS---RSGVPQASPIYG 757 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +D+A +VD+ IPA + +++ L++D+ VFD ++G+ + GKKS+A Sbjct: 758 YPAATQDVALVVDEDIPASEVAQALRDGAGELLEDLRVFDDYRGQGVESGKKSLAF 813 >gi|300744025|ref|ZP_07073045.1| phenylalanyl-tRNA synthetase, beta subunit [Rothia dentocariosa M567] gi|300380386|gb|EFJ76949.1| phenylalanyl-tRNA synthetase, beta subunit [Rothia dentocariosa M567] Length = 850 Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 246/836 (29%), Positives = 387/836 (46%), Gaps = 92/836 (11%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + D S E + TL +GLE E V E P + +VLS+E Sbjct: 1 MRIPLSWLREFAPVPEDASAEDVLATLVKVGLEEEDVHRPTDEISGPIVVGQVLSLEPET 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N +VG V PG+ +P Sbjct: 61 HSNGKTVNWCQVRVVPEGQTQTLTGKGIEESGVQGIICGAHNFKVGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 N + RK G +S GM+ S +EL + +D I+ L +D +G + L L D Sbjct: 120 GNFAITARKTYGHKSAGMIASTRELGIGEDHGGILVLSTLGLDPDLGSDALELLGLHDEA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLK----EINISCPLSSE---SIPLEIKFDLD 209 +V++TP+R +RGIA + A E P ++ S+ LE + Sbjct: 180 AEVNVTPDRGYAFSIRGIAREYAHATGTSFNDFVLEYGARAPKANSEGISVRLEDSTPIH 239 Query: 210 DSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 D+ F M V GV P WM RL+ G+RSIS VDI+NYV L+ G P H +D Sbjct: 240 DNPATIRFTMRQVNGVDATAPVPTWMASRLRLAGVRSISLPVDISNYVMLETGQPLHFYD 299 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A ++ + VRRA +GEK+ LD E DL P+++VI D + +AG++GG T Sbjct: 300 ADKVQGEIVVRRAVAGEKLTTLDGVERDLHPEDIVITDDSGVIGLAGVMGGASTEVTTET 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 ++L+E A +D ++IAR+ + +I+++ RFERGVD + + V L++ L G A Sbjct: 360 KNILIEAARFDEVSIARTARRHKLISEASKRFERGVDTKLQPAAAQRAVELLVELAAGVA 419 Query: 389 ----SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 +D+ I+R+ P I VK G++ E + L +G V + V Sbjct: 420 DAGVTDVVISRD----PVVIDLPRDYVKNRIGVEYSPEQIVNTLTEIGCEVEATATGYTV 475 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 PSWR D+ DL EEI R+ G + I P L + +Q+ R LA+ Sbjct: 476 KAPSWRNDLLAPEDLAEEIARLDGYENI---PYTLPVAPAGHGYTPEQAARRRAANALAA 532 Query: 505 RAMMEVVNWSFISKEQSVLFG---GGQR--ELEILNPISADMSNMRTSLLPGLLKATGRN 559 + EV + F+S+E + L+ G++ + + NPIS+ +R SLLPGL + RN Sbjct: 533 AGLTEVFAYPFVSEEANNLWSSPTAGEKVNSVRLANPISSAEGWLRRSLLPGLTEVLQRN 592 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK---------SE 610 + R + IFE V+ G R+GS+ I G D+ E Sbjct: 593 LSRGFKNLKIFEAGRVF-----------IPGERQGSASIPPLGERPGDEVLADLNAGIPE 641 Query: 611 ERCRFVDLF-----------DAKA-------DALSVIEPFVSLDSLRFESGAPSWYHPGR 652 + F LF A+A DA +I + ++ + G +HPGR Sbjct: 642 QPVYFSGLFAGAEHEPMPGTQARAYDWRDALDAARLIADVLGVE-IVIAQGTHQAFHPGR 700 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 + ++T +GY GE HP +L L C FEV + S R + + Sbjct: 701 TAQLRTQDGQTIGYAGELHPKLLQTENLPERTCAFEVNFTELFAS---RWGVPQASPIYG 757 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 +D+A +VD++IPA + +++ L++D+ VFD ++G+ + GKKS+A Sbjct: 758 YPAATQDVALVVDENIPASEVAQALRDGAGELLEDLRVFDDYRGQGVESGKKSLAF 813 >gi|153839846|ref|ZP_01992513.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] gi|149746629|gb|EDM57617.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio parahaemolyticus AQ3810] Length = 620 Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 213/637 (33%), Positives = 329/637 (51%), Gaps = 34/637 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV---ERNPD 57 MKF+ SWL++ ++ V+ +++ +T GLEV+ V FT VKV V ++PD Sbjct: 1 MKFSESWLREWVNPAVTTDELTHQITMAGLEVDDV--LPVAGSFTGVKVGHVVECGQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAHNCRQGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL DA +G ++L L D +DV LT NR+DC +RG+A Sbjct: 118 MLCSFTELGIDVESDGIMELAEDAVIGTDFREFLGLDDVTVDVDLTANRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + SI ++ ++ + C + VK V P Sbjct: 178 EV-----GVLNRADVTEPSVEAVATSIEDKVSIEVKAPAACPRYLGRVVKNVNVQAETPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ Sbjct: 293 SEAELNADTLVVADHSKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD + ++ L++ +CGG + + + KP K+ ++ Sbjct: 353 HTDSSMRFERGVDYALQVSAMERATQLLVEICGGEVAPVVAVESEADLPKPNKVALRRTK 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G + D + ILERLG +V + + P+WR D+ + DL+EE+ RIYG D Sbjct: 413 LDNLLGHHIADADVVEILERLGLTVEASEEGWVAVAPTWRFDIAIEQDLIEEVGRIYGYD 472 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I ++ P ++ + L R V+ +L R E + +SF+ EQ L G Sbjct: 473 NIPNQNPAAALKMHNHVEADLPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 L + NPISADMS MR L+ GLL N R +FE + + Q+ Sbjct: 530 PLVLPNPISADMSAMRLGLIQGLLNTVVHNQKRQQPRVRLFEYGLRFIPCESAENGMRQE 589 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 M AG+ G+ G E W ++ VD FD K Sbjct: 590 PMLAGVIAGTRGEEH----WDIET----NTVDFFDLK 618 >gi|169343762|ref|ZP_02864761.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens C str. JGS1495] gi|169298322|gb|EDS80412.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens C str. JGS1495] Length = 793 Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 257/842 (30%), Positives = 418/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + +I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKNINDEIKVTVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGIRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VSWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICVP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|256762124|ref|ZP_05502704.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T3] gi|256683375|gb|EEU23070.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T3] Length = 807 Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEGEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VAIEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|168211667|ref|ZP_02637292.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|168214918|ref|ZP_02640543.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens CPE str. F4969] gi|170710357|gb|EDT22539.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens B str. ATCC 3626] gi|170713645|gb|EDT25827.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens CPE str. F4969] Length = 793 Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 257/842 (30%), Positives = 418/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + +I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKNINDEIKVSVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VSWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICVP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|29375692|ref|NP_814846.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis V583] gi|227518371|ref|ZP_03948420.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis TX0104] gi|227552900|ref|ZP_03982949.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis HH22] gi|41018328|sp|Q836J5|SYFB_ENTFA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29343153|gb|AAO80916.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis V583] gi|227074049|gb|EEI12012.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis TX0104] gi|227177972|gb|EEI58944.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis HH22] Length = 807 Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEGEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VAIEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|293378780|ref|ZP_06624937.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] gi|292642573|gb|EFF60726.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecium PC4.1] Length = 806 Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 227/822 (27%), Positives = 421/822 (51%), Gaps = 35/822 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL +LD ++V+ +++ D ++ G+EVE + E L + +V +PD Sbjct: 1 MLVSYKWLNRYLDLSNVTPKELADKMSVTGIEVEGITVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRIA-GNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFSYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 RG+A ++ A + SS+ +I+ ++D + + + ++GVR +P Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSQLASDKIQVTVEDKEVVPAYQIRIIEGVRIQPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 W++ L G+R I+ +VD+TNY+ L G P H FD ++ S+ + VR A E ++ L Sbjct: 240 QWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSNEILVRHAKENETLVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D + L+ DN+VI + ++AG++GG + + TT V +E AL+DPI+I R+ K Sbjct: 300 DGESRKLTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPISIRRTAKQF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 + ++S RFE+ ++ + + ++I+SL GG + I + + Sbjct: 360 NLRSESSARFEKRINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G + +++ I E LGF + + V VP R D++ +AD++EE+ RIYG Sbjct: 420 RINQYLGTSLVVKEVNEIFEALGFGYEEKDHVYSVVVPPRRWDIQIEADIIEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 DQ+ S LP + +LS +Q TR ++ + + E ++++ ++E+S F + Sbjct: 480 DQLPS-TLPSGETV-AGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVIKES 537 Query: 530 ELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 + L+ P+S + S +R +L+ GLL N R + A++E+ V+ END + + Sbjct: 538 NITRLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDP---RAH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + ++ + I G +W +K + + + VD F K ++ E + + +++ Sbjct: 595 LPQEVKHAAIAISG---VWEEKDWQTKAQNVDFFTIKGLLENLFEQLGIHEDIHYQTVTE 651 Query: 646 -SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 652 IKEMHPGRTAAIYL-GEQFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAAQ 704 Query: 705 KKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K +V ++ V RD+A +V + + L +I + R + D+ +FDV+QG+++ +G Sbjct: 705 KGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIDSAAGRFLTDIQLFDVYQGENIEKG 764 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T D++I MD++ + + + A +R Sbjct: 765 HKSMAYSLTFVNPEATLTDEEINKAMDKVTKALTETLGASIR 806 >gi|315573708|gb|EFU85899.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309B] gi|315582677|gb|EFU94868.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0309A] Length = 807 Score = 320 bits (819), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATATEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMME 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEGEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VAIEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|218281260|ref|ZP_03487764.1| hypothetical protein EUBIFOR_00328 [Eubacterium biforme DSM 3989] gi|218217544|gb|EEC91082.1| hypothetical protein EUBIFOR_00328 [Eubacterium biforme DSM 3989] Length = 795 Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 245/837 (29%), Positives = 416/837 (49%), Gaps = 75/837 (8%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-- 57 M+ + W +D D+S+E++ +T G EVE +++ + I V + +PD Sbjct: 1 MRISRKWFNQFMDVQDLSIEEMAKRITDAGFEVEGIEHLSQGTNLVIGHVETCTEHPDSD 60 Query: 58 -LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L C + + ++ + +VCGAPNV G + A PG+ +P + V IRG+ES G Sbjct: 61 HLHCTTVNV---GNEVVSIVCGAPNVAAGQNVIVALPGAVLPGGEIKNGV--IRGVESNG 115 Query: 117 MMCSEKEL-----MLSDDSASIME-LPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCI 169 M+CS EL L+DD + +E LP DAPVG YL L D ++D+ LTPNR+DC+ Sbjct: 116 MICSLLELGVDPSSLNDDQKNGIEVLPADAPVGNTDPLGYLGLDDEVLDIGLTPNRNDCL 175 Query: 170 GVRGIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 +A + A L KL E N + + S++ L ++ + C F + + Sbjct: 176 AAFNMAKE-AGAILNREVKLPEFNGASDVGSKT-HLHVE---STTEKCPLFYGKVINHLT 230 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P WM++ L A G++SI+ +VDI+N V L+ G P H +DA + + V E+ Sbjct: 231 IKESPKWMKELLAASGVKSINNVVDISNIVMLETGQPMHFYDAKSLPEQSIVVADGFDEE 290 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ALD Y L P+++VI + G+ IAG++GG + D T +++E A++D ++I + Sbjct: 291 YTALDGVTYKLQPEDIVITNQGKPIGIAGVMGGDDSKILDTTDSIIIECAIFDHVSIRNT 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIV 405 + L + TD+ R+++G++ L V L++ T + + + Y+P+ I Sbjct: 351 ARRLNLSTDASIRYQKGIEPLASKKALDRAVQLLIEYADATGIEETVQYGQVPYEPKSIS 410 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + G D +++ + + RL F D +PS R D+E ADL EE++R Sbjct: 411 CTLEAINNRLGTDFKLDEVIDVFTRLDFEPEVADDLITCHIPSSRTDMEGMADLSEEVIR 470 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--KEQSVL 523 + G D++ S LP+ + + + L+ +Q TR ++ L ++ + + + ++ IS K+++ + Sbjct: 471 MLGYDRLPS-TLPVMPMTEGK-LTYKQQLTRQARQFLCAQGLQDCLTYTLISTEKKENAI 528 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 F + +E+ +P+S + +RTS+LP LL N R I D +FE+S V Sbjct: 529 FNTDE-AIELASPMSEERRYIRTSILPSLLDVVSYNRARNIKDINVFELSDV-------- 579 Query: 584 QKYMAAGIR--KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 AG+ K I SG L + D + K ++E F LD + Sbjct: 580 -----AGVSGAKMHLAIAMSGSLQQTRWTSDVTVSDFYTLKG----LVEAF--LDQIGIA 628 Query: 642 SGAPSW---------YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + S+ +HP RS I + V G G+ HP +G + I E+ D Sbjct: 629 AQRISFVENDLDTTHFHPYRSAKIMLGKDCV-GLLGDIHPQ----YGKN--IVMAELDFD 681 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-----IDDV 747 ++ +K + K V S V RDLAF++D+ +P +V+ I RL I DV Sbjct: 682 ALIDVKKSKIKFSPV---SKYPSVSRDLAFVLDRAMPVQKVVDTINKQGRLNKEMIIRDV 738 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VFDV++G+ + + +KSVA+ + Q T +D++I + + I+E++ K NA LRS Sbjct: 739 EVFDVYEGEHVSKDEKSVALSITFQSDSHTLKDEEINQVFEAILEHIQKDCNATLRS 795 >gi|297623584|ref|YP_003705018.1| phenylalanyl-tRNA synthetase subunit beta [Truepera radiovictrix DSM 17093] gi|297164764|gb|ADI14475.1| phenylalanyl-tRNA synthetase, beta subunit [Truepera radiovictrix DSM 17093] Length = 812 Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 247/802 (30%), Positives = 390/802 (48%), Gaps = 53/802 (6%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTG-KHQEIQ 74 LEK+ + L S+GL VE+V R A +V + +L + H+ Q Sbjct: 45 AQLEKLTELLDSLGLSVERVVERPAAPAGVVVAEVRAVAPVAASDHLLVAEVWDGHETRQ 104 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM 134 VV GAPN VGL A PG+ +P + V VR++ G+ S G++CS +EL L D + ++ Sbjct: 105 VVTGAPNTAVGLRTALAKPGATLPAVGLAVAVREVAGVRSEGVLCSPRELGLYDHAGGLI 164 Query: 135 ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG-KLKEINISC 193 DAPVG L+ L + +I++ LTPNR+D + G+A DL AA LG + Sbjct: 165 AFGEDAPVGAALA-ALWPQETVIELELTPNRADAFSLLGVARDL-AAKLGVPYRHPADGL 222 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDIT 253 PL + + +DD + C F + V GV +P W+++RL A+GLR + LVD+T Sbjct: 223 PLGDPASEDGLSVRVDDPAACPRFVLRRVDGVSVGPSPLWLQRRLAALGLRPRNNLVDVT 282 Query: 254 NYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVI------AS 306 NYV+ + G PSH +D + ++ + VRRA +GE++LAL +E LSP+N++I ++ Sbjct: 283 NYVTFELGQPSHAYDVADLTGGAVVVRRAAAGERLLALTEEELALSPENLLITTPRAPSA 342 Query: 307 DGRIQSI--AGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGV 364 +G Q I AG+IGG H TT V +EVA +DP+ I +S K LG++TD+R RFERGV Sbjct: 343 EGATQPIGLAGVIGGAHHSVKPTTTAVALEVAHFDPVTIRKSAKRLGLVTDARTRFERGV 402 Query: 365 DLQGMIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 D + PV L+ + GG P+++ F + V L+ ++VP E Sbjct: 403 D-PNLPPVAAARAAQLMAEVGGGRVHPGRTEFGGDAPPKRVAFRPARVPFLTALEVPEEV 461 Query: 424 SLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 R L LG V +++EV VPSWR D+ + DLVEE+ R+YG + I P T Sbjct: 462 QRRFLAGLGCRVTERGERWEVLVPSWRFDLAIEDDLVEEVARLYGYEHI-----PQTVPV 516 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSN 543 + + R ++ +LAS EV+ +SF + + + +P S++ S Sbjct: 517 MDFIPAGADTTHRGLRTLLASMGFQEVMTYSFTGALELERARAPAARVRLAHPPSSERSV 576 Query: 544 MRTSLLPGLLKAT-GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +RT+L PGLL A G +R A+FEV V+ D E + G + Sbjct: 577 LRTALYPGLLAAARGSRGER----LALFEVGRVFVEDELERLALLLRG--------PWAE 624 Query: 603 RLWSDK--SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 WS + + F L + A+ L +LR E HPG S + Sbjct: 625 LPWSPAALAGDFYTFKGLLEGLAETLGA--------TLRLEPAPHPALHPGVSASAFWNG 676 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 V G+ G+ HP + F L F L ++P+ ++ S +RDL Sbjct: 677 REV-GFVGQLHPEVAAQFALE---ATFVAEL-TLPLEGRE----APFRDFSRQPFAERDL 727 Query: 721 AFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A I + A + ++ V FDV+ G + EG++SVA+++ + + Sbjct: 728 AIIAPAEVTYAQLAALAREAAGAWLESVAPFDVYAGPPIPEGERSVALRLRFRHPERALE 787 Query: 780 DDDIRILMDRIVENVVKKTNAV 801 D++ M R+++ + ++ ++ Sbjct: 788 GDEVDSYMARLIDALAREGYSI 809 >gi|189461576|ref|ZP_03010361.1| hypothetical protein BACCOP_02235 [Bacteroides coprocola DSM 17136] gi|189431686|gb|EDV00671.1| hypothetical protein BACCOP_02235 [Bacteroides coprocola DSM 17136] Length = 820 Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 239/826 (28%), Positives = 403/826 (48%), Gaps = 29/826 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLK++++ D++ +++ LTSIGLE VE+V + + L I +VL+ E +P Sbjct: 1 MNISYNWLKEYVNFDLTPDEVAAALTSIGLETGDVEEVQSIKGGLEGLVIGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I ++ G+ +Q+VCGA NV G V A G+ + + + ++K +RG+E Sbjct: 61 NSDHMHITTVNLGQGDPVQIVCGAANVAAGQKVVVATLGTKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP D G DY + SD +++V +TPNRSD Sbjct: 121 SNGMICAEDEIGIGTSHEGIIVLPEDVVPGTLAKDYYNIKSDYVLEVDITPNRSDACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + ++ + P ++ + I ++++ C +A +K V Sbjct: 181 GVARDLYAWLIQNGRQATLKRPSADAFKVDNHDMNIDIVVENTEACPRYAGVAIKNVTVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC-SGEKI 287 +P W++ +L+ +G+R I+ +VDITNY+ G P H FDA +I V + C G K Sbjct: 241 ESPEWLQNKLRLIGVRPINNIVDITNYILHAYGQPMHCFDADKIKGGKIVVKTCPEGTKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E LS +++I + IAG+ GG +G + T DV +E A + P + ++ Sbjct: 301 VTLDEVERKLSDRDLMICNAEEPMCIAGVFGGLDSGTTETTKDVFLESAYFHPTWVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TDS +RFERG++ G I LK L+ L GG AS+I + + Sbjct: 361 RRHGLSTDSSFRFERGIEPNGTIYALKEAALLVKELAGGEIASEIKDNYSAPIADFPVEL 420 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 L G +P E I+ L + E + + VP++R DV+ D+VE+ILR Sbjct: 421 SYEYTNALIGKVIPAETIKSIVTSLEMKITDETPEGLSLLVPAYRVDVQRPCDVVEDILR 480 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG + ++ + + K ++ V L E++N S + Sbjct: 481 IYGYNNVEIPTSVKSSLSVKGDVDKSVKLQNLVSEQLVGCGFNEIMNNSLTAATYYEGLE 540 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 + E ++++NP+S D++ MR +LL G L++ N +R AD FE + Y E Sbjct: 541 TYKPENLVQLMNPLSNDLNVMRATLLFGGLESIQHNANRKNADLKFFEFGNCYHFNAEKR 600 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 PE K +AA + G+ +G+ S+ +++ KA L++ V+ L Sbjct: 601 NPE--KVLAAYSEELHLGLWITGKRVSNSWAHPDENTSVYELKAYVLNIFRRLGVNFGGL 658 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + Y S + T +L FG H I F + N + ++ + + Sbjct: 659 VFGNLTDDIYSVAIS--VHTRGGKLLATFGVLHKKIQKAFDIDNEVYYADLNWKELMKAI 716 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKS 757 K T K +S VKRDLA ++D+ + + I D +L+ V +FDV++GK+ Sbjct: 717 KNNTVAYK--EISKFPAVKRDLALLIDKKVQFAEIEKIAYETDKKLLKSVELFDVYEGKN 774 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS A+ ++Q T D I +M +++ N+ K +A LR Sbjct: 775 LEAGKKSYAVSFMLQDENATLNDKQIDKVMQKLIANLQNKLDAKLR 820 >gi|323345414|ref|ZP_08085637.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269] gi|323093528|gb|EFZ36106.1| phenylalanyl-tRNA synthetase beta subunit [Prevotella oralis ATCC 33269] Length = 821 Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 239/843 (28%), Positives = 411/843 (48%), Gaps = 62/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQETADALTSTGLEVDSLEEVQTVKGGLKGLFVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE--NNMIVNVRKIRGIE 113 D D + +D GK + Q+VCGAPNV G + A G + E N + ++RG++ Sbjct: 61 DSDHLHVTTVDLGKEEPQQIVCGAPNVAAGQKVIVADLGCVLYEGDNEFTIKKSRLRGVD 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA VG ++Y L SD +I++ +T NRSD + Sbjct: 121 SFGMICAEDEIGIGTGHDGIIVLPDDAVVGTPAAEYYHLESDWLIEIDITANRSDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A L + ++ P + +E++P+++ +++++ CK +A + Sbjct: 181 GVARDLYAWLLQNGYQTSLHRPDCSAFKVDNEALPIDV--EIENTDACKRYACVSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W++ +L+ +GLR I+ +VDITNY+ + G P H FDA + + VR G Sbjct: 239 VKESPEWLQNKLRVIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGRKIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAGI GGK +G D T +V++E A + P I + Sbjct: 299 KFVTLDGEEHALGAHDLSICNAEEPMCIAGIFGGKGSGTYDTTKNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---R 402 S + G+ TDS YRFERG+D G + LK L L GG S +++ +P Sbjct: 359 SARRHGLSTDSSYRFERGIDPDGTVYALKQAAILCKELAGGKVS--MRIKDVYPEPINGS 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLV 460 ++ V RL G + + I+ L + E + E+ VP++R DV+ D+V Sbjct: 417 RVALEYDYVDRLIGKAIGHDTIKSIVTSLEMKIEAERENRSLELLVPAYRVDVQRPCDVV 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFI 516 E+ILRIYG + ++ +P Q++ + ++ + +++ ++ + E++N S Sbjct: 477 EDILRIYGYNNVE---IP-AQLKSSLTVQGEEDKADHLQNIIGEQLVGCGFSEILNNSLT 532 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 E ++++NP+SAD+ MR +LL G L++ RN +R ++ FE + Sbjct: 533 KTSYYAGLNHYTEESTVKVMNPLSADLGVMRQTLLFGGLESIMRNANRKNSNLKFFEFGN 592 Query: 575 VYENDTPEG------QKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 Y D + + YM G+ +EGS W+ E F+ KA Sbjct: 593 CYYFDKGKWTADEPIKGYMEECHLGLWVTGKRVEGS---WAHPDEAS----SFFELKAYV 645 Query: 626 LSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +V + E+ + + G + +K L G IL Sbjct: 646 QNVFARLGIGPGMYVVENSDNNIFSKGLA--VKNRGGKTLAEMG-----ILSIKLKKQAD 698 Query: 685 CGFEVYLDSI---PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 +VY I + + R + +S V RDLA ++D+ + + + K + Sbjct: 699 ISSDVYFADINWTAVMKAVRKHKVEFAEISKYPAVSRDLALLIDKDVQFEQIDRLAKQSE 758 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 R L+ V +FDV++GK+L GKKS A+ ++Q + T D I +M++++ + K A Sbjct: 759 RKLLKRVELFDVYEGKNLPAGKKSYAVNFILQDEQKTLNDKQIDAIMNKLITQLTTKLGA 818 Query: 801 VLR 803 LR Sbjct: 819 QLR 821 >gi|329939045|ref|ZP_08288419.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces griseoaurantiacus M045] gi|329301930|gb|EGG45823.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces griseoaurantiacus M045] Length = 834 Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 261/861 (30%), Positives = 422/861 (49%), Gaps = 84/861 (9%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNR-EAL-SPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ + L P + +VL+VE Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEQHGDGLKGPLVVGQVLTVEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFSVGDKVVVVLPGAELP-GGFAISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + +D + I+ LP + VG + L+L D ++D+++TP+R Sbjct: 118 TYGKVSHGMICSSDELGMGEDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+++ D C F V Sbjct: 178 CLSMRGVARETAIAYGL-PLRDPALLDVPAP-NAFGHPVKVA----DPFGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+ +RL+ G+R IS VD+TNYV L+ G P H +D SR+ + VRRA Sbjct: 232 GLDPEARSPIWLTRRLQKAGMRPISLAVDVTNYVMLELGQPLHAYDRSRVQGAIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD---NTTDVLVEVALWD 339 GE++ LD +LS D++VI D +AG++GG ++ DD TT+V+VE A +D Sbjct: 292 QGERLTTLDGVTRELSTDDLVITDDRGPIGLAGVMGGANSEIDDTEGTTTEVVVEAAHFD 351 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 +++AR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 352 SVSVARTARRHKLSSEASRRFERGVDPEAASAAAQRTVDLLVLLAGGTAEAGVTDIIAPS 411 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 P I +++G+ E +R L+++G V G+ D+ V+VPSWR D+ + DL Sbjct: 412 APHTITVPADHPDKVAGVTYGRETVVRRLQQIGCDVYGQ-DELLVTVPSWRPDLTDPNDL 470 Query: 460 VEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 EE++R+ G + + S P PL L+ +Q R V R LA +E + + F+ + Sbjct: 471 AEEVIRLEGYENLPSTLPRPLP----GHGLTERQRLHRRVGRALAGAGYVEALTYPFLGE 526 Query: 519 ---EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +Q L R + ++NP+S + +RT+LLPGLL A RN R D A+FE Sbjct: 527 AALDQLGLDADDPRRTLVTLVNPLSDEEPALRTTLLPGLLGALRRNDGRGSHDLALFETG 586 Query: 574 HVY----ENDTPE---------------------GQKYMAAGIRKGSSGIEGSGRLWSDK 608 V+ E P+ Q AA + G+ G W K Sbjct: 587 LVFLPTGEERIPDRLPVDRRPSKADLAALDAALPRQPRHAAVVLAGAREQAG----WWGK 642 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SAEIVLG 665 R D DA A +V + ++R E AP +HPGR + E ++G Sbjct: 643 G----RPSDWADAIQAARTVAGEYGVELTVRAEQHAP--WHPGRCAALYALVDGTETLVG 696 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + GE HP ++ L C EV LD + + + ++ ++ +D+A +VD Sbjct: 697 HAGELHPRVVKAMHLPERACAAEVELDVLERAGQGMLAAPRI---ATFPVATQDVALVVD 753 Query: 726 QHIPAGTLVNIIK-NVDRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + +PA + ++ L++ V +FDV++ + LGEG+KS+A + + T D+ Sbjct: 754 RAVPAADVEAALREGAGELLESVRLFDVYENAEQLGEGRKSLAYALRFRAEDRTLTVDEA 813 Query: 784 RILMDRIVENVVKKTNAVLRS 804 D V +T AVLR Sbjct: 814 SAARDAAVALAGSRTGAVLRG 834 >gi|148544441|ref|YP_001271811.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri DSM 20016] gi|184153805|ref|YP_001842146.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri JCM 1112] gi|227363131|ref|ZP_03847266.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri MM2-3] gi|325682763|ref|ZP_08162279.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] gi|148531475|gb|ABQ83474.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus reuteri DSM 20016] gi|183225149|dbj|BAG25666.1| phenylalanyl-tRNA synthase beta subunit [Lactobacillus reuteri JCM 1112] gi|227071849|gb|EEI10137.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri MM2-3] gi|324977113|gb|EGC14064.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus reuteri MM4-1A] Length = 805 Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 232/825 (28%), Positives = 412/825 (49%), Gaps = 42/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WL+++LD DV+ + + + + +++ V + + L + +V+ E +PD D Sbjct: 1 MKVSYQWLQEYLDLDVAPQDLAEKIARTSVDINDVYSLSDGLKKIVVGEVVQCENHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + IQ+VCGAPNV+ G + A G+ I +N I KIRG+ES GM+ Sbjct: 61 HLHVCQVDVGEEEPIQIVCGAPNVQEGKKVIVALHGARIADNQKI-KRGKIRGVESNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ SD A I LP DA G + YL + D +ID +TPNR D + + Sbjct: 120 CALQEIGFSDKIAPKDYEDGIYFLPDDAKNGDPVFKYLGMDDTVIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVA-AGL-GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A GL KE+ I + ++ L ++ ++ D+ + + + +KGV+ + Sbjct: 180 GNVNDIAAFYGLKSHFKEVAIKEEGTEKTADL-LQAEIADTKIAPTYKLRVIKGVKIAES 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ RL G+R ++ +VD+TNY+ L G P H +D ++S VR A GEK + Sbjct: 239 PLWLQIRLWNSGIRPVNNVVDVTNYILLKYGQPLHSYDYDQLSGKNFGVRHANEGEKFVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L +++V+ D + ++AG +GG+ D+TT V +E A++DP+ + + + Sbjct: 299 LDGDEQTLKANDIVVTVDNQPVALAGTMGGEGTAVSDDTTTVALEAAIFDPVMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 L + ++S RFERG++ + L +I L GGT + I I Sbjct: 359 LDLHSESSMRFERGINPATVETALNEAAEMIKELAGGTITAGIVTGSEAPAVDTPIKLSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +++ + G + +E I +RL F +V G+ D+ V P+ R D+ ADL EEI RI Sbjct: 419 AKINHVLGTSLTMEQVTDIFDRLAFAYTVDGD-DQLTVIAPARRWDISLAADLYEEIARI 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D + S LP T ++ L+ +Q R + L + + +++S + E++ F Sbjct: 478 YGYDNLPST-LP-TMTRNRGGLTPRQRFIRASRHDLEGMGLTQAISYSLTTVEKAKQFQI 535 Query: 527 G--QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 +++ P+S+D R +++ GLL NV R + + A++E V+ ++ P Sbjct: 536 KPLAEPMKLDFPMSSDHVATRMNIVSGLLNDIAYNVARNVDNVALYEEGRVFLPMGDERP 595 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 Q+++AA + +G++ ++ ++ + VD F K ++ + + Sbjct: 596 VEQEHLAAAV---------TGQMVANSWNKKDQPVDFFQLKGIVERYLKNMGIAGKVAYV 646 Query: 641 -ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 S P HPGR+ I ++V G+ G+ HP + + FE+ L+ + + K Sbjct: 647 PTSDRPEM-HPGRTADIMVDDQLV-GFIGQVHPQTAKEYKIPETYV-FELNLELLLTAPK 703 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 + + S + RD+A +VD + T+V IK + D+ +FDV+ G L Sbjct: 704 IENEYTPISKYPS---ITRDIALLVDDEVENATIVEAIKQKGGAYLKDIHLFDVYAGSHL 760 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q K T +D + D++ + K +A +R Sbjct: 761 PAGKKSLAYTLTYQDNKGTLTEDQVNAAFDKVTAYLQDKIDAEIR 805 >gi|229815996|ref|ZP_04446318.1| hypothetical protein COLINT_03050 [Collinsella intestinalis DSM 13280] gi|229808455|gb|EEP44235.1| hypothetical protein COLINT_03050 [Collinsella intestinalis DSM 13280] Length = 824 Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 252/846 (29%), Positives = 414/846 (48%), Gaps = 64/846 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPD-- 57 MK + WLK ++ ++ G EVE ++ E+ KVLS E +PD Sbjct: 1 MKVSYDWLKSMVELPEDPSELSREFIRTGTEVEAIETVGESFDRIVTAKVLSKEAHPDSD 60 Query: 58 ------LDCAILRIDT-GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 +D +D G + +Q+VCGA N G V A G+ +P ++ + K+R Sbjct: 61 HLWVTMVDVGTNNVDAEGSPEPLQIVCGAQNFNEGDHIVTAMIGAELP-GDIKIKKGKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ S GM CS +EL LS D IM LP DAP+G + YL SD ++D +TPNR+DC+ Sbjct: 120 GVVSCGMNCSARELGLSADHEGIMILPEDAPIGMPFAQYLGTSDTVLDCEITPNRADCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 + GIA + V A + +++ + P + +L D LC + V+ V+ Sbjct: 180 MIGIARE-VGAIYDRDFHVDLPAIAAESGTPTAETVSVELIDEGLCDRYVARVVRDVKVG 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRACS 283 +P W+ QRL + G+R+ + +VDITNYV + G P H FD + + + VR A Sbjct: 239 PSPEWLVQRLNSCGIRTHNNVVDITNYVMMLTGQPLHAFDLNAFEEKSGKRSVAVRVARE 298 Query: 284 GEKILALDNQEYDLSPDNVVIAS---DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 GE LD+ E LS +IA+ ++AG++GG + D T DVLVE A ++ Sbjct: 299 GEVFRTLDDVERTLSAGMGLIATGEAGATPVALAGVMGGMESEVTDATVDVLVESACFNA 358 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 + + ++L +I+D+ RFER VD G + V +LI L GG + C+ ++ Sbjct: 359 GRTSHTSRDLALISDASIRFERQVDETGCVDVANIACALIEQLAGGKVAPGCV--DVYPS 416 Query: 401 PRKIVFMN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDV 453 P+++ ++ S V L G + L RLG SV E + F V ++R D+ Sbjct: 417 PKQLAPISLRLSRVHELCGAAIEPSFIETALTRLGCSVEAEGEGDACVFAVMPATFRPDL 476 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 + DL+EE+LR++G+D++++ +P + L+ +Q TR V ++L + + E +N+ Sbjct: 477 TREIDLIEEVLRLWGMDRVEAT-IPAAK-NHIGGLTREQQLTRKVGQILRACGLNETMNF 534 Query: 514 SFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 SF + G G +EI+NP+ A+ + MR SL+PGLL++ N+ + A+ + Sbjct: 535 SFAAPGDLERIGMTDEGRGCPVEIMNPLVAEQTEMRRSLIPGLLQSVEYNIKHSTANVQL 594 Query: 570 FEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +E+ ++ EN + ++ AG+ GS G W+ K RF FD K Sbjct: 595 YEIGTLFFGRENASAPKERESVAGVLSGSMG----DVTWNHKPMP-LRF---FDGKG--- 643 Query: 627 SVIEPFVS---LDSLRFESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 V+E +S +RF Y PGR + S VLG+ GE HP+ D +G+ Sbjct: 644 -VVEELLSQLRTPKVRFRPAGGDDYAFLQPGRGAEV-LSGGTVLGWVGEIHPDARDVYGI 701 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 P+ FE+ L+++ K + S V+ DLA +VD + L +++ Sbjct: 702 DIPVVAFELNLEAL---IKGAGAQEAYREFSQFPSVEHDLAIVVDDDVTCEDLERRLRSA 758 Query: 741 -DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 +L+ V +FDV++ +G GKKS+A + + T +++ ++V V K T Sbjct: 759 GGKLLVGVRLFDVYRDPVRVGVGKKSMAFALTYRADDHTLTSEEVERAHSKLVTKVCKAT 818 Query: 799 NAVLRS 804 +RS Sbjct: 819 GGEVRS 824 >gi|256832341|ref|YP_003161068.1| phenylalanyl-tRNA synthetase, beta subunit [Jonesia denitrificans DSM 20603] gi|256685872|gb|ACV08765.1| phenylalanyl-tRNA synthetase, beta subunit [Jonesia denitrificans DSM 20603] Length = 854 Score = 319 bits (818), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 267/865 (30%), Positives = 411/865 (47%), Gaps = 77/865 (8%) Query: 2 KFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 + +L WL DH++ L ++ L +GLE E + + P + +V+S+E P + Sbjct: 3 RISLPWLADHVEVPQGLTASQLAADLVRVGLEEEAIHSSGVTGPVVVGRVVSLEAEPQKN 62 Query: 60 CAIL---RIDTGKH---------QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + ++D G+H +VCGA N VG V A PG+ +P ++ R Sbjct: 63 GKTINWCQVDVGEHGVPGADGSFAPRGIVCGAHNFGVGDFVVVALPGAVLP-GPFAISSR 121 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPI------DAPVGGRLSDYLELSDPIIDVSL 161 K G S GM+CS++EL L DD A I+ L D VG L L D I+++++ Sbjct: 122 KTYGHISDGMICSQRELGLGDDHAGIIVLTTLGFDERDLCVGDDALAVLGLDDEILEINV 181 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISC---PLSSESIPLEIKFDLDDSSL----- 213 TP+R C +RGIA + A ++ ++ P +++ + ++ DD+ + Sbjct: 182 TPDRGYCFSMRGIAREYAHATRKVFEDRVVAGRTPPATADGFSVVVR---DDAPIHGVVG 238 Query: 214 CKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C F V+G+ A P WM +RL+ G+RSIS VD+TNYV LD G P H +D S + Sbjct: 239 CDRFVTRLVRGIDPAAATPRWMVRRLEQAGMRSISLTVDVTNYVMLDMGQPLHAYDLSTV 298 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GRIQSIAGIIGGKHAGCDDN 327 + + VRRA SGE + LD+QE L +++VIA R+ +AG++GG Sbjct: 299 VEPIVVRRAISGELLTTLDDQERVLHAEDLVIADSSGGEGARVLGLAGVMGGAATEVSAR 358 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TTDVL+E A +D +++ARS + + +++ RFERGVD + +V L++ GG Sbjct: 359 TTDVLIEAAHFDAVSVARSARRHKLPSEASRRFERGVDPLVAPFAAQRVVELLVEFGGGV 418 Query: 388 ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV- 446 A N I F + +RL G+ + +R L+ +G V D V V Sbjct: 419 ADPRVGDVNEVPARSSIKFSLRDPERLCGVPYSDDSVVRALQEIGCVVTAVPDSSIVDVV 478 Query: 447 -PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 PSWR D+ A+LVEE+ R+ G D I L Q R L+ Q R V LA Sbjct: 479 PPSWRPDLTGAAELVEEVARLVGYDMIVPR---LPQAPAGRGLTAAQKARRRVAAALAEW 535 Query: 506 AMMEVVNWSFISKE-QSVLFGGGQ----RELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E +++ F S E + L Q + + + NP+ D S MRTSLL L+ RNV Sbjct: 536 GCVETLSYPFTSDEARDALMIDAQDVRRQSVRLRNPLQGDRSLMRTSLLETLVDTARRNV 595 Query: 561 DRAIADFAIFEVSHVYE-NDTPEGQKYMAAGIRKGSSGIEG------------SGRLWSD 607 R IA FAI E+ V D + + + +E +G L Sbjct: 596 SRGIASFAISEIGMVTRPGDCAMSAPALPPARQPSADELEQLLASVPSQPRHVAGVLCGS 655 Query: 608 KSE-------ERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTS 659 +SE E ++ D DA AL V E VSL ++ AP +HPGR + T Sbjct: 656 RSEASWWGGAEAWQWSDALDA---ALLVAERVGVSLRVESEQNYAP--FHPGRCARLVTE 710 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 + +GY GE HP + + GL C FEV LD++ + V S+ K D Sbjct: 711 DLVTVGYAGELHPKVCEQVGLPARSCAFEVDLDALIFACDNVPVQADPV--STFPVAKED 768 Query: 720 LAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 AF+V + I A ++ I+ ++ V +FDVF+G+ +G G+KS+A V ++ T Sbjct: 769 FAFVVAEDITAASVRQAILDGGGADVESVQLFDVFRGEQVGAGRKSLAFAVRLRAHDRTL 828 Query: 779 RDDDIRILMDRIVENVVKKTNAVLR 803 + + +RI++ +A LR Sbjct: 829 DAQGVSEIRERIIKAAAFSVDAELR 853 >gi|238063951|ref|ZP_04608660.1| phenylalanyl-tRNA synthetase, beta subunit [Micromonospora sp. ATCC 39149] gi|237885762|gb|EEP74590.1| phenylalanyl-tRNA synthetase, beta subunit [Micromonospora sp. ATCC 39149] Length = 849 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 272/859 (31%), Positives = 414/859 (48%), Gaps = 117/859 (13%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIV-KVLSVE--- 53 M+ ++SWL+++LD D+ + L +G+EVE VD R ++ +V +VL +E Sbjct: 1 MRVSVSWLREYLDLPADLPAADLEQALVDLGIEVESIVDLRSTVTGALVVGEVLEIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N G V PG +P + Sbjct: 61 GFKKPIRFC---RVDVGAANGTGEPQEI--VCGARNFAPGDRVVVILPGGVLP-GGFAIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTP 163 RK G S GM+CS KEL L DD + I+ LP D P G + L D +++V +TP Sbjct: 115 ARKTYGRNSNGMICSAKELGLGDDHSGIIVLPEDTPAKPGDDARPVVGLDDMVVEVEITP 174 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINIS-CP--LSSESIPLEIKFDLDDSSLCKGFAMC 220 +R + VRGIA +L A ++ ++ P + + P+EI+ D+ C FA Sbjct: 175 DRGYALSVRGIARELAHALGVPFRDPGLAPAPGATAEPAYPVEIR----DTVGCDRFAAR 230 Query: 221 CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 V+GV P WMRQRL G+RSIS VDITNYV L+ G P H FDA+RI+ L VR Sbjct: 231 MVRGVDPTAPTPGWMRQRLTVAGVRSISLPVDITNYVMLELGQPMHAFDAARITGPLVVR 290 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA +GEK+ LD L+ +++VI D S+A ++GG+ + +TTDVL E A WD Sbjct: 291 RAEAGEKVTTLDGVTRTLTAEDMVICDDTGPVSLAAVMGGETSEVVASTTDVLFEAAHWD 350 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNIT 398 P+ + R+ + + +++ R+ERGVD + ++ V L+ GGTA ++I +I Sbjct: 351 PVMVGRTARRHKLFSEAAKRWERGVDPALPLVAIERAVGLLTEHAGGTAGAEILDLDHI- 409 Query: 399 YKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSV------------------IGEY 439 +PR V + +++ R G+ + + +LE++G V G Sbjct: 410 -RPRTPVTLPADLPSRRVGVAYSPQRVVSLLEQVGCHVTRGADRLGEDPGSAGVPATGGT 468 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D V PSWR D+ + ADLVEE+ R+ G D++ S L R L+ QQ R R V Sbjct: 469 DVLTVVPPSWRPDLTDPADLVEEVARLDGYDRVPSV---LPTAPPGRGLTWQQRRRRAVA 525 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLK 554 R LA R +EV+ F++ E + L G +R + + NP+S +RT+LL LL Sbjct: 526 RTLAERGYVEVLAHPFVAGELADLLGLPADDPRRRAVRVANPLSEKEPLLRTTLLGPLLG 585 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEG-------------------------QKYMAA 589 RN+ R D A++E+ V+ G Q A Sbjct: 586 ICKRNLGRGHRDVALYEIGAVFHPRPGAGAPPAMGVDRRPTDAELAAADAVVPDQPRHVA 645 Query: 590 GIRKG---SSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + G +G G+GR W+D E + D AD + V R A Sbjct: 646 VVLTGDVEPAGWWGAGRPAGWADAVEAGRVVLAAADLPADRVEV----------RAAEYA 695 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 P +HPGR + +V+G+ GE HP +L L E+ LD++P + T Sbjct: 696 P--WHPGRCAELLVDG-VVVGHAGELHPAVLAALELPRRTSAMELNLDALPAAPVAPAPT 752 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 +S P D+A +VD+ +PA + +++ L++ V +FDV+ + LG G++ Sbjct: 753 -----VSGFPPALIDVALVVDERVPAAQVQQALVEGAGELLEGVRLFDVYASEQLGAGRR 807 Query: 764 SVAIQVLIQPLKDTFRDDD 782 S+A ++ TFR D Sbjct: 808 SLAYKL-------TFRAPD 819 >gi|110800145|ref|YP_696567.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium perfringens ATCC 13124] gi|110674792|gb|ABG83779.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens ATCC 13124] Length = 793 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 257/845 (30%), Positives = 419/845 (49%), Gaps = 96/845 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 V G+A + A + + + C ++I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPSTKFEVKC---DKNINDEIKVSVNDK-LCNRYMARGVKNVK 228 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+ Sbjct: 229 VAPSPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGD 288 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI Sbjct: 289 KFVTLDEIERELNSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRV 348 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKI 404 + KNLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 349 NSKNLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTL 408 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ Sbjct: 409 EVSVSWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVA 468 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS------- 517 RIYG + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 469 RIYGYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKI 526 Query: 518 --KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Sbjct: 527 CVPEDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKT 582 Query: 576 Y-----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 Y EN+ P + + GI +C D FD K ++E Sbjct: 583 YIPNSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVE 617 Query: 631 PFVSLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGL 680 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ Sbjct: 618 NL--LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGV 670 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKN 739 P E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 671 DVPCYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRK 726 Query: 740 V-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K Sbjct: 727 AGGQVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKL 786 Query: 799 NAVLR 803 A LR Sbjct: 787 GAQLR 791 >gi|220905838|ref|YP_002481149.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 7425] gi|219862449|gb|ACL42788.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 7425] Length = 817 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 239/841 (28%), Positives = 426/841 (50%), Gaps = 61/841 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ + E + + LT G EVE +++R + IV +VL+ E +P+ D Sbjct: 1 MRISLNWLRELVEVTLEPEVLAEVLTMAGFEVEDIEDRRTWADGVIVGEVLTCEPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 + +++ G+ + +VCGA NV+ GL A PG+ +P+ + + K+RG+ S Sbjct: 61 KLKVCQVNLGQAEPATIVCGAANVQAGLRVAVATPGTFLPKVGAEGLKIRPSKLRGVMSQ 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+CS EL L+ +SA I P+G + L L D I+D++ T NR+D + + GIA Sbjct: 121 GMICSLAELGLAKESAGIHHFAEQPPIGSDVRPLLSLDDVILDLTSTANRADALSMVGIA 180 Query: 176 LDLVAAGLGKLK--EINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 ++ A GKLK E+ + P++ +S+ + + D C + + GV +P Sbjct: 181 REVAALTGGKLKLPEVPLLKIPVADQSLQVAVA----DPQACPAYIGTVLDGVTIAPSPL 236 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGE 285 W+++RL+A G R I+ +VDITNY+ L G P H FD R+ + L VR A +GE Sbjct: 237 WLQRRLEATGTRPINNVVDITNYILLLWGQPLHAFDGDRLQQLAGQSNLTLGVRFAEAGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD Q+ L N++I S + ++AG++GG+ D T ++++E AL++ + I R Sbjct: 297 TLTTLDGQQRSLQEQNLLITSQNQPVALAGVMGGETTEVHDGTKNLVLEAALFNSVVIRR 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S ++ + T++ R+ERGV+ + +H + LI SL GG A + + R I Sbjct: 357 SARSQSLRTEASARYERGVNEAELDIACRHALDLIQSLAGGQLVSQQAADSRSQSVRSIE 416 Query: 406 FMNSEVKRLSG-IDVP--------IEDSLRILERLGFSV--IGEYDKFEVSVPSWR-QDV 453 V+ + G I++P + +L LGF++ + + V+VP R +D+ Sbjct: 417 LRLERVQLVLGPINLPEGEMGELDAKTVTALLTSLGFTLSPVEPEQVWTVTVPPHRYRDI 476 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 E + DL+EEI R+YG D + LP + L L Q+ R ++ + + E+V++ Sbjct: 477 EREIDLIEEIARLYGYDNF-CDTLPTK--SELGYLPLDQAIERQLREAFRAAGLTELVHY 533 Query: 514 SFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 S++ E S R+++++NP+ + S +RT LL GL+ A N+ + FE+ Sbjct: 534 SWVKSEAS-------RQVKVINPLLVEFSALRTELLTGLINAFALNLSQGNGPLNGFEIG 586 Query: 574 HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 V+ + E Y A + G G+ W S++ + + ++AK +++ Sbjct: 587 RVFWQE--ENGLYEADALAGIIGGDPFRGK-WVRGSQQE-QPLSWYEAKG----ILDSVF 638 Query: 634 SLDSLRFESGA----PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 S +L+ E P HPGR+ + E LG FG+ HP + L + FE+ Sbjct: 639 SRLNLQVEYQPDRRDPR-LHPGRTASLWIQGE-RLGTFGQLHPQLRQERDLPEAVYVFEL 696 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNV-----DRL 743 L+ + ++ +T+ + S +P RDLAF I L ++ L Sbjct: 697 DLEVLIAHLYQQQETQAIFQPFSPYPASDRDLAFFAKLDISVAELERTMRQAATTPQGTL 756 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ V +FD +QG+S+ G++S+A +++ + T + DI+ + +I + + +K LR Sbjct: 757 LESVELFDQYQGESVPPGQRSLAFRLIYRASDRTLTEADIQPVHQKIRDTLEEKYQVKLR 816 Query: 804 S 804 S Sbjct: 817 S 817 >gi|194466623|ref|ZP_03072610.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] gi|194453659|gb|EDX42556.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus reuteri 100-23] Length = 805 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 233/829 (28%), Positives = 415/829 (50%), Gaps = 50/829 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WL+++LD DV+ + + + + +++ V + + L + +V+ E +PD D Sbjct: 1 MKVSYQWLQEYLDLDVAPQDLAEKIARTSVDINDVYSLSDGLKKIVVGEVVKCENHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + IQ+VCGAPNV+ G + A G+ I +N I KIRG+ES GM+ Sbjct: 61 HLHVCQVDVGEEEPIQIVCGAPNVQEGKKVIVALHGARIADNQKIKR-GKIRGVESNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ SD A I LP DA G + YL + D +ID +TPNR D + + Sbjct: 120 CALQEIGFSDKIAPKDYEDGIYFLPDDAKTGDPVFKYLGMDDTVIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVA-AGL-GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A GL KE I + ++ L ++ ++ D+ + + + +KGV+ + Sbjct: 180 GNVNDIAAFYGLKSHFKETAIKEEGAEKTADL-LQAEITDTKIAPTYKLRVIKGVKIAES 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ RL G+R ++ +VD+TNY+ L G P H +D ++S + VR A GEK + Sbjct: 239 PLWLQIRLWNSGIRPVNNVVDVTNYILLKYGQPLHSYDYDQLSGNNFGVRHANEGEKFVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L +++V+ D + ++AG +GG+ D+TT V +E A++DP+ + + + Sbjct: 299 LDGAEQTLKANDIVVTVDDQPVALAGTMGGEGTAVSDDTTTVALEAAIFDPVMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 L + ++S RFERG++ + L +I L GGT + I I Sbjct: 359 LDLHSESSMRFERGINPATVETALNEAAEMIKELAGGTITAGIVTGSEAPAVDTPIKLSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +++ + G + +E I +RL F +V G+ D+ V P+ R D+ ADL EEI RI Sbjct: 419 AKINHVLGTSLTMEQVTDIFDRLAFAYTVDGD-DQLTVIAPARRWDISLAADLYEEIARI 477 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG D + S LP T ++ L+ +Q R + L + + +++S + E++ F Sbjct: 478 YGYDNLPST-LP-TMTRNRGGLTPRQRFIRASRHDLEGMGLTQAISYSLTTVEKAKQFQI 535 Query: 527 G--QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 +++ P+S+D R +++ GLL NV R + + A++E V+ ++ P Sbjct: 536 KPLAEPMKLDFPMSSDHVATRMNIISGLLNDIAYNVARNVDNVALYEEGRVFLPMGDERP 595 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q+++AA + +G++ ++ ++ + VD F K ++E ++ + + Sbjct: 596 LEQEHLAAAV---------TGQMVANSWNKKDQPVDFFQLKG----IVERYLKNMGIDGK 642 Query: 642 ------SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 S P HPGR+ I ++V G+ G+ HP + + FE+ L+ + Sbjct: 643 VAYVPTSDRPEM-HPGRTADIMVDDQLV-GFIGQVHPQTAKEYKIPETYV-FELNLELLL 699 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQ 754 + K + + S + RD+A +VD + T+V IK + D+ +FDV+ Sbjct: 700 TAPKIENEYTPISKYPS---ITRDIALLVDDDVENATIVEAIKQKGGAYLKDIHLFDVYA 756 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G L GKKS+A + Q K T +D + D++ + K +A +R Sbjct: 757 GSHLPAGKKSLAYTLTYQDDKGTLTEDQVNAAFDKVTAYLQDKVDAEIR 805 >gi|328956068|ref|YP_004373401.1| phenylalanyl-tRNA synthetase beta subunit [Coriobacterium glomerans PW2] gi|328456392|gb|AEB07586.1| phenylalanyl-tRNA synthetase beta subunit [Coriobacterium glomerans PW2] Length = 831 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 259/855 (30%), Positives = 411/855 (48%), Gaps = 75/855 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ + +WLK +D ++ + L G EVE V+ E L +V++ +PD D Sbjct: 1 MRVSYAWLKTMVDLPTDPYELAERLNRTGTEVETVETVGENLENVVTARVVTKVPHPDSD 60 Query: 60 CA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ID G + IQ+VCGA N G V A G+ +P + + K+RG+ES GM Sbjct: 61 HMWVTMIDVGADEPIQIVCGAQNFNEGDHIVTALIGAELP-GGIRIKKSKLRGVESRGMN 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L D IM LP DAPVG S Y SD ++D +TPNR DC+ + G+A ++ Sbjct: 120 CSAAELGLGADHDGIMILPPDAPVGVPFSRYRGTSDTVLDCEITPNRPDCLSMIGMAREV 179 Query: 179 VAAGLGKLKEINISCP-LSSES---IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 G +E+ I P +S E+ EI D++ LC + ++GV +P WM Sbjct: 180 ---GAVLDRELRIDAPSISREAGRPTAEEIALDIEGEGLCSRYVARVIRGVSVGPSPEWM 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRACSGEKILA 289 QRL A G+RSI+ +VDITNYV + G P H FD + ++VR A E Sbjct: 237 VQRLAAAGVRSINNVVDITNYVMMLTGQPLHAFDLEAFAAHDGHRQISVRAARPREVFRT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD Q+ LS V+I R ++AG++GG + + +TT VLVE A +D + + ++ Sbjct: 297 LDGQDRTLSEGMVLITDGERPVALAGVMGGMDSEIESDTTSVLVESACFDAARTSHTSRD 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L +I+D+ RFER VD G + V +LI + GGT + + K + V + Sbjct: 357 LSLISDASIRFERQVDEAGCLDVANIACALIEQIAGGTVAPGFVEHYPAPKVQSEVELR- 415 Query: 410 EVKRLSGI-DVPIEDSL--RILERLGFSVIGEYDKFE----------------------V 444 + RL I PIE + L RLG +IG D E Sbjct: 416 -IARLRKIVGAPIEAAFAEHALIRLGCELIGSADAAEHVGRIAAEAAGPAAEGADRPLRF 474 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +P++R D+ + DL+EE+LR++G +++ S +P + L+ +Q R V +L + Sbjct: 475 KIPTFRPDLTREIDLIEEVLRLWGTERVPSR-IPAAE-NHIGGLTREQRTRRRVGSILRA 532 Query: 505 RAMMEVVNWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 + E + SF + + G G + ++NP+ D + MR SLLP LL N+ Sbjct: 533 CGLSETRSLSFAAPDDLARIGMSTAGRGLPVVLMNPLVHDQTEMRRSLLPSLLHQVAYNL 592 Query: 561 DRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 AD A++E ++ E+ + ++ AG+ G+SG + W D + RF Sbjct: 593 AHGTADVALYETGTLFFGRESASLPRERASVAGVLTGASGYDS----WLDHPKP-ARF-- 645 Query: 618 LFDAKADALSVIEPFVS---LDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 FD K V+E ++ ++ +RF E + GR+ + S VLG+ GE Sbjct: 646 -FDGKG----VVEELLAQLRIEKVRFRVPEGDTAAHLQSGRAAEV-LSGGAVLGWVGEIS 699 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P L+ + P+ FE+ LD+ + R H SS V+ DLA +VD+++ Sbjct: 700 PVALEALDIDQPVVAFELNLDA--LVDGARDAGSFRAH-SSYPAVEVDLAIVVDENVSCE 756 Query: 732 TLV-NIIKNVDRLIDDVTVFDVFQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L ++ RL+ + +FDV++ ++ +G G+KS+A + Q T ++ R Sbjct: 757 DLERRLMSAGGRLLRGIRLFDVYRDEARVGAGRKSMAFSLTYQADDHTLTSQEVDKAHQR 816 Query: 790 IVENVVKKTNAVLRS 804 +V+ V T +RS Sbjct: 817 LVKKVTASTGGEVRS 831 >gi|188586431|ref|YP_001917976.1| phenylalanyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351118|gb|ACB85388.1| phenylalanyl-tRNA synthetase, beta subunit [Natranaerobius thermophilus JW/NM-WN-LF] Length = 819 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 247/847 (29%), Positives = 420/847 (49%), Gaps = 70/847 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERNP 56 M+ + +WL ++LD D+S +++ + LT+ G+EVE + E L+P + +V V +P Sbjct: 1 MQVSYNWLCEYLDLDISPQELAEKLTNGGVEVEGI---EQLNPDLDDIVVGEVKEVTEHP 57 Query: 57 DLD-CAILRIDTGK---HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + D ++ ++D G E+Q+VCGAPNV VG A GS +P + I+ IRG Sbjct: 58 NGDKLSVTKVDVGDASDSSELQIVCGAPNVAVGQKVPVALVGSMLP-DGFIIESCSIRGE 116 Query: 113 ESTGMMCS--EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM+CS E EL+ ++ IM L DAP+G + YLEL D I++ LTPNR+DC+G Sbjct: 117 RSYGMICSCEELELLSPEEEEGIMVLDDDAPIGESIVTYLELDDTILEFDLTPNRADCLG 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G+A ++ A E ++ ++++ EI +++DS+L + + ++ + + Sbjct: 177 MLGVAREVAALLDIPFHEPEVTDYKQNKTLD-EININIEDSNLSERYIGMLIEDINIETS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++Q+L++ G+R I+ LVDITN++ ++ G P H FD I ++VR A E+I Sbjct: 236 PMWLQQKLRSYGIRPINNLVDITNFIMIEYGQPLHAFDYDWIKGKNISVRSAQKDEQIKT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD ++ L+P ++VIA + R +IAG++GG NT +L+E A ++ I++ R+ Sbjct: 296 LDEKQRTLTPQDIVIADEERPIAIAGVMGGYDTEVSLNTNRILLEAASFNNISVRRTANR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CG----GTASDICIARNITYKPRKI 404 L + +++ RFE+GVD + + LI L G G A + R ++ Sbjct: 356 LNLRSEASLRFEKGVDPNNTLKAAFRAIDLIEQLDVGKVKIGAADEYPQIRECV----EV 411 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD----------KFEVSVPSWRQDVE 454 S V+ L+G+D+ ++ I RL F + GE K V VP+ R D+ Sbjct: 412 ELRTSRVRALTGLDISDDEIKDIFRRLDFDIDGEKSLSNTDSERGLKLTVKVPTRRNDIS 471 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL+EEI RIYG D+I + +P ++ R + Q + L + E+++++ Sbjct: 472 LEVDLIEEIARIYGYDRIPTS-MPQGKITQGRK-THSQKVADISRETLLTAGFSEIISYT 529 Query: 515 FISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 FIS + + + + + NP++ + S MRT+++P +LK N + DF + Sbjct: 530 FISPDDFDRIKLTEDDQFRTAVPLANPMTKEQSIMRTTMIPSILKILEHNSNHGEKDFQV 589 Query: 570 FEVSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 FE+ VY + P Q + G G G+L E+ +D F K Sbjct: 590 FEIGKVYFPKELPLKELPREQTNLIFG---------GMGKLTPKTWMEQPGEIDFFHLKG 640 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +IE +++ F +HP R+ IK E V G GE HP + F L N Sbjct: 641 VFELLIERLNLNISDFDFMPEKHPSFHPTRTATIKYRGERV-GLMGEIHPELASEFNLDN 699 Query: 683 PICG---FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 + FE + S + + L V RDLA +V + P + I + Sbjct: 700 AVIAELNFEKIIGSANLFDSYQP-------LPKYPAVLRDLAVLVPEDTPEEHVAGKIAD 752 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 LI+++ +FD++QG + EG KS+A + + + T D+ + + + I + + Sbjct: 753 TGSGLIENIQLFDLYQGDRIPEGMKSLAYSISFRDPESTLTDEYVDNIFEEIERRLESEL 812 Query: 799 NAVLRSS 805 A LR S Sbjct: 813 GAKLRKS 819 >gi|294673558|ref|YP_003574174.1| phenylalanyl-tRNA synthetase subunit beta [Prevotella ruminicola 23] gi|294472763|gb|ADE82152.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella ruminicola 23] Length = 820 Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 244/840 (29%), Positives = 411/840 (48%), Gaps = 57/840 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ +++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTAQQVADALTSTGLEVDALEEVQSIKGGLKGLYVGKVLTCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN--MIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + + + ++ K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPSQIVCGAPNVAAGQKVIVADLGCVLYDGDKEFVIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA VG ++Y L SD +I+V +T NR+D + Sbjct: 121 SNGMICAEDEIGVGTSHDGIIVLPEDAVVGTPAAEYYNLESDWLIEVDITANRADGLSHW 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A E + P + + +P+E+K ++++ CK +A + Sbjct: 181 GVARDLYAWLKSNGYETKMHRPDCSKFTVDNHDLPIEVK--IENTEACKRYACVSISDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P+W++ +L +GLR I+ +VDITNYV + G P H FDA + + V+ G Sbjct: 239 VKESPDWLKNKLNTIGLRPINNIVDITNYVMMAYGQPLHTFDADMVKGHQIVVKTMPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 LD +E+ LS ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 PFQTLDGEEHKLSDRDLAICNAEDPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TD+ +RFERGVD G I L+ L L GG S + +V Sbjct: 359 SARRHGLSTDASFRFERGVDPNGTIYALQQAAILCKELAGGKVSMEIVDVYPEKMENAVV 418 Query: 406 FMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEI 463 ++ + V L G ++P + I E L V+ E + ++ +P++R DV D+VE+I Sbjct: 419 DLSYQYVHGLVGKEIPTDKIKAICESLEMKVLEETAEGLKLEIPAYRVDVTRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVED----KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 LRIYG + ++ +P TQ++ K + + V L E++N S Sbjct: 479 LRIYGYNNVE---IP-TQLKGSLVIKGDEDQKHKLANIVSEQLVGEGFNEILNNSLT--- 531 Query: 520 QSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + + G + ++I+NP+S D++ MR +LL G L++ NV+R A+ FE + Sbjct: 532 KGAYYEGHNAYAAENCVKIMNPLSTDLNVMRQTLLFGGLESVQHNVNRKRANLRFFEFGN 591 Query: 575 VYENDTPEG----------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 VY D + ++Y AA G +EGS W+ +EE F +L + Sbjct: 592 VYTFDPEKANLDDPMQAYKEQYHAALWITGKR-VEGS---WAHANEE-SSFYELSAYVEN 646 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 L I V + + + G + I+ L G +L FGL P+ Sbjct: 647 ILRRIG--VKPGMIVRKKSENDIFSAGLT--IENRGGKKLIEMGIITKKLLKQFGLDAPV 702 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 F L+ + + + + V RDLA +VD + + I + + +L Sbjct: 703 --FYAELNWTALMKVIKKNEVLYTEVPKFPAVSRDLALLVDNSVEFAQIEQIARATEKKL 760 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V +FDV++G L GKKS A+ ++Q + T D I +M++++ + K+ NA LR Sbjct: 761 LKKVELFDVYEGDKLPAGKKSYAVNFILQDEEKTMGDKQIEAIMNKLIAQLKKQLNAELR 820 >gi|283470349|emb|CAQ49560.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus ST398] Length = 800 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 413/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKAPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + ++ I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELSAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A V+Q+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVNQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|257418945|ref|ZP_05595939.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T11] gi|257160773|gb|EEU90733.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T11] Length = 807 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 226/827 (27%), Positives = 417/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + +++S + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVENYVTVTVENSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGET-VAGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPG++ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGQTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|218247617|ref|YP_002372988.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8801] gi|218168095|gb|ACK66832.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8801] Length = 812 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 235/835 (28%), Positives = 421/835 (50%), Gaps = 54/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +++WL++ ++ + E + + LT G+EVE++++R + ++ K++ + +P+ D Sbjct: 1 MKISVNWLQELVNVTLPPETLAEILTVAGIEVEEIEDRRQWADGVLIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + +VCGAPN R + A G+ +P+ ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDIGKETPLNIVCGAPNARSDIFVAVATLGTYLPQIDLKIKPAKLRGVPSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I ++ +G +L L D I+D+S T NR+D + + G+A + Sbjct: 121 CSLAEVGLAKESAGIHIFDDNSLKLGADARPFLGLDDVILDISPTANRADALSMVGVARE 180 Query: 178 LVAAGLGKL---KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A GKL + ++S P E+ + ++D + C + ++ V+ +P W+ Sbjct: 181 VAALTGGKLSLPQPPDLSLP---ETSSYRLNVTVEDGNACPAYLGTVIENVKIAPSPEWL 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 ++RL+A G+R I+ +VD+TN V L+ G P H FD ++ + L +R A E + Sbjct: 238 QRRLQAAGVRPINNVVDVTNLVLLEWGQPLHAFDREKLQVIAKNQPLTLGIRFAKDTETL 297 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE L P N++I ++ ++AG++GG+ D+NT ++++E AL+D + I RS Sbjct: 298 KTLDDQERTLKPVNLLITANDHPVALAGVMGGQETEVDENTQNIVLEAALFDQVTIRRSS 357 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + ++S R+ERGV+ + + ++LI L GGTA IA N + + + Sbjct: 358 RAQSLRSESSARYERGVNQSALEIACRRAIALICELAGGTAVTQVIADNRPDLSTESIIL 417 Query: 408 NSEVKRLSGIDVPIE-----------DSLRILERLGFS---VIGEYDKFEVSVPSWR-QD 452 E R+ + PIE D RIL LG V G + VSVPS+R +D Sbjct: 418 RLE--RVHQVLGPIEKEGTITQIAATDVERILTDLGCHLTLVEGTNKVWRVSVPSYRYRD 475 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E + DL+EE+ R+YG D E L + LS + R V+ V + EVV Sbjct: 476 LEREIDLIEEVARLYGYDNFCDE---LPDKSEPGGLSFEYQVQRKVREVFRGVGLTEVVQ 532 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + E++ ++ + NP+ A+ + +RT+LL GL+ + N + FE+ Sbjct: 533 YSLVKPEKA--------DIVLANPLFAEYAALRTNLLDGLIDSFVYNQSQGNGALNAFEI 584 Query: 573 SHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 ++ + Q++ AGI G +G W+ + + ++AK SV Sbjct: 585 GRIFRIIDGKDQEWDEIAGIFGGDVFPQGR---WTRSG--KSVPMTWYEAKGILESVFG- 638 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L + HPGR+ + E LG FG+ HP + L + + F + Sbjct: 639 RLGLAVTYQADNSDERLHPGRTASLWVGKE-RLGIFGQLHPQLRQEKDLPDAVYVFALNF 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTV 749 D + S K ++ S +P V+RDLAF + L ++ K L+ +V + Sbjct: 698 DILLASLAKEDLITPILRPYSTYPAVERDLAFFAPLKVSVAELTQVMNKAGGNLLTEVEL 757 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD +QG+++ G++S+A + + T D D+ + D+I +VK+ LRS Sbjct: 758 FDQYQGENVPAGQRSLAFSLAYRASDRTLTDGDVEPVHDKIRNALVKQFEVTLRS 812 >gi|253682547|ref|ZP_04863344.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum D str. 1873] gi|253562259|gb|EES91711.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum D str. 1873] Length = 791 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 239/828 (28%), Positives = 433/828 (52%), Gaps = 62/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M ++WLKD++D ++S +++ D LT G +VE+V + ++ K++ +E++PD + Sbjct: 1 MLVPINWLKDYVDINISPQELGDALTLSGSKVEEVIVTGDVINKVVTGKIVKIEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDINAEEPIQIVTAATNMKEQDIVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 119 Query: 119 CSEKELMLSDDS--ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M +P + P+G + + ++L+ ID +T NR DC+ + GIA Sbjct: 120 CSEEELGIAGDKPVVGLMIMPEETPLGKEVKEVMDLAKASIDFEITSNRPDCLSIIGIAR 179 Query: 177 DLVAAGLGKLKEINISCPLS------SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + AA LG I+ P + +E+I +K ++ D LC+ + VK V+ + Sbjct: 180 E-TAATLG----IDYKTPSTDYTVENNENINNSLKVEVKDE-LCRRYMARGVKNVKIAPS 233 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P+WM++RL G++ I+ +VDITN+V ++ G P H FD +IS + + V RA +GEK + Sbjct: 234 PSWMQERLLDAGVKPINNIVDITNFVMIELGQPMHAFDRKQISSNTIVVERAKNGEKFIT 293 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L+ + + I + ++AGI+GG ++ D+TT+++ E A +D NI S K Sbjct: 294 LDGEERELNEEILNIKDGDKTIALAGIMGGLNSEVKDDTTEIVFECANFDGTNIRVSSKK 353 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L + T++ +FE+ +D + + LI L G + I K IV ++S Sbjct: 354 LNLRTEASGKFEKDLDPNAVEIAMNRACHLIQKLGAGEVMEGTIDIYPNKKETHIVEVDS 413 Query: 410 E-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + V + G D+ + +L+RL + D ++VP++R D+ K D+ EEI RIYG Sbjct: 414 KWVNKFLGTDLSKNEMKNLLDRLELATEINEDTLIITVPTFRCDINIKEDIAEEIARIYG 473 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF-- 524 + IK+ + ++ +N Q + + V ++AS + + + +SF+S + +L Sbjct: 474 YNNIKATTPSVETLKGGKNPK-QLLQDKIVDTLIAS-GLNQSIAYSFVSPKVFDKILIPQ 531 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----EN 578 ++ + I NP+ D S MRT+ +P ++++ RN R+ ++ +FE+ VY EN Sbjct: 532 ESDLRKVVTIRNPLGEDYSIMRTTSIPSMMESLSRNYSRSNSEVRLFEIGKVYIPDEDEN 591 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + PE + ++ G+ VD D K ++++ + + Sbjct: 592 ELPEERNIISLGMYGN---------------------VDYLDLKGVVENILDTL-GIIKV 629 Query: 639 RF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 +F ES PS +HPG++ ++ + + G GE HP++ + + + E+ +D + Sbjct: 630 KFQRESENPS-FHPGKTAVLYIKKDFI-GVVGEVHPDVAENYEVDERCYVAELNMD---V 684 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 K KK V L V RD+A +VD+ I + + IKN +L++ V +FDV+QG Sbjct: 685 LFKYAQTEKKYVELPKFPAVTRDIAILVDRDILVQEIEDTIKNQGGKLLESVKLFDVYQG 744 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 K + E KKS+A ++ + + T D D+ + D+I+ + K A LR Sbjct: 745 KQIPEDKKSIAYALVYRGDR-TLTDKDVNKVHDKIIRALEHKLGAELR 791 >gi|320161899|ref|YP_004175124.1| phenylalanyl-tRNA synthetase beta chain [Anaerolinea thermophila UNI-1] gi|319995753|dbj|BAJ64524.1| phenylalanyl-tRNA synthetase beta chain [Anaerolinea thermophila UNI-1] Length = 843 Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 257/868 (29%), Positives = 420/868 (48%), Gaps = 89/868 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----------------- 43 MK LSWLK+ +D D++LE++ LT GLEVE++ P Sbjct: 1 MKVVLSWLKEFVDIDLNLEELARLLTMAGLEVEEIQLVGLPMPPAERHEFHYSGLTWEPD 60 Query: 44 -FTIVKVLSVERNPDLDCAIL-RIDTGKHQEIQVVCGAPNV---------RVGLLGVWAP 92 + ++ V +P+ D +L R+ G+ QE V+ GAPN+ L +A Sbjct: 61 KIVVAQIDEVMPHPNADRLVLCRLHDGQ-QEHTVLTGAPNLFEYKGKGPLPQPLKVAYAK 119 Query: 93 PGSCIPENNMIVNV------RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 G+ I + + V KIRG+ES M+CSEKEL +S++ I+ L DAP G L Sbjct: 120 EGARIYDGHQPGQVLTTLKRAKIRGVESYSMVCSEKELGISEEHEGIILLDPDAPTGMPL 179 Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 +Y+ D ++DVS+ P+ + C + G+A ++ A L+ + P + ESI + Sbjct: 180 VEYM--GDAVLDVSILPSMARCASILGVAREVAALTGKPLRLPRTTLPATGESILGKAAI 237 Query: 207 DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 + + F + ++ VR +P ++ RL+ G+R I+ +VD TNYV L+ G P H Sbjct: 238 QITEPEYNPRFVLGLIRNVRIQPSPYKVQLRLRLAGMRPINNIVDATNYVMLEIGEPLHA 297 Query: 267 FDASRI-------SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 FD + + RRA GE + LD E L V++ SIAG++GG Sbjct: 298 FDYQALVRRANGNPPTIITRRAKPGETLTTLDGVERKLDDFTVLVCDTAGALSIAGVMGG 357 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP--VLKHIV 377 + TTDVL+E A W+ INI ++ + + +++ YRF RGV + P V + Sbjct: 358 AETEVTEQTTDVLLEGASWNFINIRKTVASQKLNSEAAYRFSRGVH-PALAPEGVKLGLE 416 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 + L G A+D+ A + + +I +E++R GID+ + ++ +L RLGF Sbjct: 417 RMALWSGGEIAADLIDAYPVPHHDPEIDLTAAEIRRALGIDLSLAEAETLLSRLGFICQR 476 Query: 438 EYDKFEVSVPSWRQDVEE----KADLVEEILRIYGVDQIKSEPL--PLTQVEDKRNLSLQ 491 E + V P R D+ E KADL+EEI R+YG D+I + L PL +++ +L Sbjct: 477 EGETLHVQTPPHRLDIGEGLVGKADLIEEIARLYGFDRIPARRLADPLPSLQEDPDL--- 533 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQS---VLFGGGQRE---LEILNPISADMSNMR 545 + T V+ L + EV+ + E+ L +R L + NPIS D S MR Sbjct: 534 -APTEKVRDALVRLGLQEVITYRMTVPEREHRLYLDDAPERSAPYLRLANPISLDRSVMR 592 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSG 602 SLL +++ RN+ R A+FE+ V+ E T + + A + G+ Sbjct: 593 RSLLASVMEIAERNI-RLRERLALFEIGPVFLPVEGQTLPNEDWRVALVLTGTRQPPA-- 649 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 W K +D +D K ++E + + + + S +HPG+ + S E Sbjct: 650 --WDRKE---VTPMDFYDLKGILEGLLE-ALHIPDVTYRPAQNSTFHPGKCAEV-LSGER 702 Query: 663 VLGYFGEFHPNILDF--FGLSNPICG---FEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 VLG FGE HP + + FG + + G + L+SIP++ +V + + PV Sbjct: 703 VLGVFGELHPKVKEHYDFGTAPVLAGDLSLKALLESIPVAY-------EVGAVPAFPPVL 755 Query: 718 RDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 DLA +VD+ IPA + +++ +L+ V +FD+++G+ +G GKKS+A ++ Q L Sbjct: 756 EDLAVVVDEDIPAARVEEVLRQGGGKLLTAVRLFDIYRGEQIGAGKKSLAYRLTYQALDR 815 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D D + RI+ + ++ A +RS Sbjct: 816 TLTDKDAASIRQRIIRRLEQELGARIRS 843 >gi|158337435|ref|YP_001518610.1| phenylalanyl-tRNA synthetase subunit beta [Acaryochloris marina MBIC11017] gi|158307676|gb|ABW29293.1| phenylalanyl-tRNA synthetase, beta subunit [Acaryochloris marina MBIC11017] Length = 813 Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 238/836 (28%), Positives = 410/836 (49%), Gaps = 55/836 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WLK+ +D D+S E + + LT G EVE +++ + +V KVL+ E +P+ D Sbjct: 1 MRISLNWLKNLVDIDLSPEDLAEQLTLAGFEVEDIEDLRTWADGVVVGKVLTCESHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + Q+VCGAPNV+ GL A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCTVDIGEAEPSQIVCGAPNVKAGLYVPVATLGTYLPTPDLKIKKAKLRGVPSAGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L + I D VG + L L D I+D++ T NR+D + + G+A + Sbjct: 121 CSLTELGLESEIDGIHSFETDGVAVGNDVRPLLGLDDVILDLTSTANRADALSMVGVARE 180 Query: 178 LVAAGLGKLKEINISCPLSSE-SIP--LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A KLK P + + IP ++K DL D+ C + ++ V +P W+ Sbjct: 181 VTALTGAKLK-----LPATPKLEIPSGKDVKVDLSDAEACPAYIATVLENVTIAPSPGWL 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 +QRL A G R I+ +VDITNY+ L+ G P H FDA + + L VR A SGE + Sbjct: 236 QQRLIAAGTRPINNVVDITNYILLEWGQPLHAFDADSLETLAKKKPLTLGVRLAKSGETL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+Q+ L +VI ++ + ++ G++GG+ D +T +++E AL++ + I RS Sbjct: 296 TTLDSQKRKLQEQTLVITANDQPVALGGVMGGEETEVKDTSTRLVLEAALFNSLTIRRSA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-------SDICIARNITYK 400 ++ + +++ R+ERGV+ + H + L++ L G + R+I + Sbjct: 356 RSQSLRSEASARYERGVNESQLETACLHALQLLVDLTGAKVVAQQRADHRKSLERSIELR 415 Query: 401 PRKIVFMNSEVKRLSG--IDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQ-DVEE 455 ++ + +VK G D+ +D L IL+ L F + + V VP R D+E Sbjct: 416 LDRVNHVLGKVKGKKGEPTDLTAKDILPILKSLSFDTTPTNRPETWTVKVPPHRHSDIER 475 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 + DLVEEI R+YG D E LP + LS Q + R ++ + + E++++S+ Sbjct: 476 EIDLVEEIARLYGYDNF-CETLPAKT--ELGTLSSQDALARKLREAFRAVGLTELIHYSW 532 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + GG ++ ++NP+ + S +RT +L LL A RN ++ FE+ V Sbjct: 533 VKP-------GGDDQVVVVNPLLVEFSALRTEMLTSLLNACQRNWEQGNGALNGFEIGQV 585 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + EG+K A G G + + W ++ + + F+AK V+ Sbjct: 586 FWK---EGEKLKEARAIAGILGGDPAQGKWM-RTANQDYAMTWFEAKGLLERVLSQLGL- 640 Query: 636 DSLRFESGAPSW-YHPG-RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 S+ F+S P HPG + +I A+ LGYFG+ HP + L Sbjct: 641 -SVTFQSDCPDQRLHPGCTAALISQGAK--LGYFGQIHPQVQQERDLPTVYVFELNLDLL 697 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-----DRLIDDVT 748 + + +TK S+ RDLAF + + + +I+ L+ + Sbjct: 698 LEQLARLQTKATLFSTYSTYPAADRDLAFFIPTEVTVAEIEKVIRKAAGGRKQSLLTAIE 757 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD +QG+ + EG++S+A ++L Q T D+++ + ++ + K+ LRS Sbjct: 758 LFDEYQGEHVPEGQRSLAFRLLYQACDRTLTDEEVNPIHQKVRNALEKQFKVSLRS 813 >gi|315170967|gb|EFU14984.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX1342] Length = 807 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELANGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG KKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGADKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|290961738|ref|YP_003492920.1| phenylalanyl-tRNA synthetase subunit beta [Streptomyces scabiei 87.22] gi|260651264|emb|CBG74386.1| putative phenylalanyl-tRNA synthetase beta chain [Streptomyces scabiei 87.22] Length = 840 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 264/873 (30%), Positives = 422/873 (48%), Gaps = 102/873 (11%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDN-REAL-SPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ + L P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATQTGRDVQAKLISAGLEVETVEQLGDGLKGPLVVGQVLTIEELT 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 EFKKPIRFCTVDVGTANGTGEPQEI--VCGARNFAVGDKVVVVLPGAELP-GGFAISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + VG + LEL D ++D+++T NR D Sbjct: 118 TYGRNSHGMICSSDELGMGDDGTKGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGD 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+++ D C F V Sbjct: 178 CLSIRGVARETAIAYGL-PLRDPALLDVPGP-NAFGHPVQVS----DPLGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D S + + VRRA Sbjct: 232 GLDPEARSPIWLKRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRSLVQGTIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN---------TTDVLV 333 GEKI+ LD L +++VI + +AG++GG D+ ++DV++ Sbjct: 292 EGEKIVTLDGVTRKLHAEDLVITDERGPIGLAGVMGGADTEIADHDAVENGGNASSDVVI 351 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D + IAR+ + + +++ RFERGVD + V L++ L GGTA D + Sbjct: 352 EAAHFDQVAIARTARRHKLSSEASRRFERGVDPLAAPAAAQRTVDLLVLLAGGTA-DAGV 410 Query: 394 ARNIT-YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 +T P I +++G+ E +R L+ +G V G D V+VPSWR D Sbjct: 411 TEAVTPSAPHTITVPADHPDKVAGVHYGRETVVRRLQEVGCDVYG-TDDLIVTVPSWRPD 469 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + E DL EE++R+ G + + P L + R L+ +Q R V R LA +E N Sbjct: 470 LAEVNDLAEEVIRLEGYENL---PSTLPKPPSGRGLTHRQRLHRRVGRALAGAGYVEAPN 526 Query: 513 WSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + FI ++ G +R + + NP++ + +RTSLLPGLL A RN R D Sbjct: 527 YPFIGEQVFDQLGLDADDPARRVVRLTNPLNDEEPALRTSLLPGLLGALRRNDGRGTHDL 586 Query: 568 AIFEVSHVY--------------------------ENDTPEGQKYMA---AGIRKGSSGI 598 A+FE V+ PE +++A AG R+ +G Sbjct: 587 ALFETGLVFLPRAEQRVAVAPPVDRRPTDDEIAALNAALPEQPRHVAVVVAGARE-QAGW 645 Query: 599 EGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-- 654 G GR W+D + E R V A+ +I G +HPGR Sbjct: 646 WGRGRPADWAD-TVEAGRAV----AREAGAELI----------VRKGQYGPWHPGRCAEL 690 Query: 655 -IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 I+ E V+G+ GE HP ++ GL E+ LD++ ++ T + +SS Sbjct: 691 VIVADGTERVVGHAGELHPRVIKALGLPARTAAMELDLDAV---EQAGNTTPQAPRISSF 747 Query: 714 HPVKRDLAFIVDQHIP-AGTLVNIIKNVDRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLI 771 +D+A +VD +P A + + L++ + +FDV++ + LG+G+KS+A + Sbjct: 748 PVATQDVALVVDAFVPHADVEAALREGAGELLEGIRLFDVYENAEQLGDGRKSLAYALRF 807 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D+ D V ++T AVLRS Sbjct: 808 RAEDRTLTVDEATAARDAAVALAGERTGAVLRS 840 >gi|253755405|ref|YP_003028545.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis BM407] gi|251817869|emb|CAZ55623.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis BM407] Length = 799 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 231/808 (28%), Positives = 416/808 (51%), Gaps = 39/808 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D D + + + +++ G+EVE V+ + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSKLVVGQVVSAEPIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 I +++ G+ Q+VCGAPNV+ G+ + A PG+ I N + KIRG+ES GM+C Sbjct: 61 LNICQVNVGEAI-TQIVCGAPNVKPGIKVIVALPGARIA-GNYKIKKGKIRGVESLGMLC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S E+ +SD + I LP DA VG + YL+L D II++S+TPNR+D + +RG Sbjct: 119 SLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDEIIELSITPNRADALSMRG 178 Query: 174 IALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A K K + + S +E+ + D + ++ V +P Sbjct: 179 VAHEVAAIYDSKVNFKPVVLEESDKKASDVIEVAIESDK---VTAYTARVIENVTIAPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITNY+ L G P H FD + + R+A GE ++ L Sbjct: 236 QWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKFEGKKIVARQAKEGENLVTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E DL D++VI+ + ++ G++GG + D+++ V++E AL+D +I ++ L Sbjct: 296 DGEERDLIADDIVISVADKAVALGGVMGGANTEIDNSSKTVVLEAALFDGKSIRKTSGRL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G+++ + + ++I L GG S I A ++ + Sbjct: 356 NLRSESSSRFEKGINVATLTEAMDTAAAMIAELAGGQVLSGIVSAGSVDTSDVPVTATID 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V R G ++ I RLG G+ +F V+VP R D+ ADLVEEI RIYG Sbjct: 416 YVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTVAVPRRRWDIRIPADLVEEIARIYGY 475 Query: 470 DQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + + P L + ED L+L Q+ R V+ + + E+++++ + +++V F Sbjct: 476 NNL---PTTLPK-EDGTAGELTLTQNIRRQVRSLAEGAGLTEIISYALTTPDKAVEFVAR 531 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + E++ P++ D S +R +++ G+L NV R + A++E+ ++E + ++ Sbjct: 532 PTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVARKNKNLALYEIGKIFEQ-SGNPKED 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPF-VSLDSLRFESGA 644 + I K + + G L ++K + VD F AK ++ + + +++D + A Sbjct: 591 LPQEINKFALVLTG---LVAEKDFQTPAVPVDFFHAKGILEAIFDHYKLAVDFVATSEIA 647 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I + V+G+ G+ HP +G+ E+ LD+I ++ Sbjct: 648 A--LHPGRTAEIHLNGA-VIGFVGQVHPQTAKDYGIPETYVA-EINLDAI---EEALQPA 700 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGEGK 762 + +S V RD+A +++ + +++ I V RL VT+FDV+ G ++ GK Sbjct: 701 QPFTDISKFPAVSRDIALLLNSDVKHQDVLDAIAGAGVKRLT-KVTLFDVYAGSNIEVGK 759 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS+A + Q +D+ D+++ M++I Sbjct: 760 KSMAYNLTFQNPEDSLTDEEVAKYMEKI 787 >gi|332883337|gb|EGK03620.1| phenylalanyl-tRNA synthetase subunit beta [Dysgonomonas mossii DSM 22836] Length = 821 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 260/852 (30%), Positives = 421/852 (49%), Gaps = 80/852 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLKD+LD D+S ++ D LTS+GLE VE+V+ + L I +VL+ +P Sbjct: 1 MNISYNWLKDYLDFDLSPQETADALTSLGLETGGVEEVETVKGGLEGLVIGEVLTCVDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 D D I ++ G+ + +Q+VCGA NV G V A G+ + + + + KIRG+E Sbjct: 61 DSDHLHITTVNVGESEPLQIVCGAANVAAGQKVVVALVGTKLYSGDESFTIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + A I+ LP DA VG ++ + S+ I++V +TPNR D Sbjct: 121 SLGMICAEDEIGIGTSHAGIIVLPADAKVGTPAKEHYNIQSEYILEVDITPNRIDGASHF 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSS---ESIPLE-----IKFDLDDSSLCKGFAMCCVKG 224 G+A DL A LK+ + L S ES L+ + ++++ C +A +KG Sbjct: 181 GVARDLAAY----LKQNKLKGSLKSPSVESFQLDEPNGGVPVKVENTEACPRYAGVTIKG 236 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACS 283 V+ +P W++ RL +VGLR I+ +VD+TNYV + G+P H FD + IS + V+ Sbjct: 237 VKVTESPEWLKNRLTSVGLRPINNVVDVTNYVLQELGHPLHAFDVAHISGGTVIVKTLPE 296 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 G K + LD E LS +++I +D I G+ GG +G +NTTDV +E A ++P I Sbjct: 297 GTKFVTLDEVERTLSERDLMICNDKEGMCIGGVFGGLDSGVTENTTDVFLECAYFNPTWI 356 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITYKP 401 +S + G+ TD+ + FERG D I VLK LI L GG I N KP Sbjct: 357 RKSARRHGLNTDASFHFERGCDPNDTIYVLKRAALLIQELAGGKIVGPIQDIYPNPVAKP 416 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLV 460 + + +V L G + + ILE L ++ E D +SVP++R DV D++ Sbjct: 417 T-VELLYDKVNSLIGKVIEKDTVKSILESLEITIEKETEDTLSLSVPTYRVDVLRDVDVI 475 Query: 461 EEILRIYGVDQIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 E+ILR+YG + I+ S P + D +NL +Q L E++ Sbjct: 476 EDILRVYGYNNIEIGDSLKSNLSYETPTDKSYDLQNLISEQ---------LTGSGFKEIM 526 Query: 512 NWSFISKEQSVLFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 N S ++KE + Q + ++NP+S D++ MR +L+ G L++ N + D Sbjct: 527 NNS-LTKE--AYYSDSQLYPVINSVRVINPLSNDLNVMRQTLIYGGLESIAYNRNHQNPD 583 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +E + Y D +K +++ + E LW + + + A + Sbjct: 584 IKFYEFGNCYLYDA--SKKVEGETLKEYNE--EFHLGLWLSGN----NISNSWAAGDEKT 635 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV--------------LGYFGEFHP 672 SV + ++++ G P R ++TS EI LG G + Sbjct: 636 SVYQLKAYVENILARLGIA----PNRYEYVQTSNEIFTAALDIQAKGKGKSLGVLGIVNK 691 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 +L ++ + E+ DS+ KK + T +S VKRDLA ++D++I Sbjct: 692 KVLKSQDINAEVFYAELNWDSLMKEIKKHSIT--YTEISKFPAVKRDLALLLDKNILFDQ 749 Query: 733 LVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + I +R L+ +V++FDV++GK+L EGKKS A+ +IQ + T D I +M +I Sbjct: 750 IEKIAYKAERKLLKNVSLFDVYEGKNLPEGKKSYAVNFVIQDDEKTLNDKQIDAIMQKIQ 809 Query: 792 ENVVKKTNAVLR 803 +++ + A LR Sbjct: 810 KSLESELGAQLR 821 >gi|168215513|ref|ZP_02641138.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens NCTC 8239] gi|182382074|gb|EDT79553.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens NCTC 8239] Length = 793 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 257/845 (30%), Positives = 419/845 (49%), Gaps = 96/845 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 V G+A + A + + + C ++I EIK ++D LC + VK V+ Sbjct: 173 VVGMARETAATTRKTYRMPSTKFEVKC---DKNINDEIKVSVNDK-LCNRYMARGVKNVK 228 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+ Sbjct: 229 VAPSPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGD 288 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI Sbjct: 289 KFVTLDEIERELNSDILCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRV 348 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKI 404 + KNLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 349 NSKNLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTL 408 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ Sbjct: 409 EVSVSWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVA 468 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS------- 517 RIYG + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 469 RIYGYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKI 526 Query: 518 --KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Sbjct: 527 CVPEDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKT 582 Query: 576 Y-----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 Y EN+ P + + GI +C D FD K ++E Sbjct: 583 YIPNSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVE 617 Query: 631 PFVSLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGL 680 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ Sbjct: 618 NL--LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGV 670 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKN 739 P E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 671 DIPCYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRK 726 Query: 740 V-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K Sbjct: 727 AGGQVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKL 786 Query: 799 NAVLR 803 A LR Sbjct: 787 GAQLR 791 >gi|18310867|ref|NP_562801.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium perfringens str. 13] gi|30316254|sp|Q8XJ76|SYFB_CLOPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|18145549|dbj|BAB81591.1| phenylalanine-tRNA ligase beta chain [Clostridium perfringens str. 13] Length = 793 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 256/842 (30%), Positives = 418/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + +I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKNINDEIKVTVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G + E+ + L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VSWINKFLGTSLEAEEMKKCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICVP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAELDLDAM----YNFSKTEKYYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|290969189|ref|ZP_06560714.1| phenylalanyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] gi|290780695|gb|EFD93298.1| phenylalanyl-tRNA synthetase, beta subunit [Megasphaera genomosp. type_1 str. 28L] Length = 810 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 242/829 (29%), Positives = 407/829 (49%), Gaps = 43/829 (5%) Query: 1 MKFTLSWLKDHLDTD--VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPD 57 MK +L W+K+++ TD + D LT G+ VE V+ + K+L +E++PD Sbjct: 1 MKSSLQWMKEYVRTDYITDPQAFADRLTIAGIPVEAVETWGNEVKKVISGKILQIEKHPD 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + +Q+V GA N+ VG + A G+ +P + + K+RG+ S G Sbjct: 61 ADKLTVCQVDMGE-ETLQIVTGAKNIAVGNIVPVAVHGAHLP-GGVKIKKSKLRGVPSFG 118 Query: 117 MMCSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M CS KE D + I LP P+G L YL L D + LTPNR+DC Sbjct: 119 MFCSAKEFGFDDSVLQPEEREGIWILPDTTPIGTDLVSYLGLEDVVYTYELTPNRADCFS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G++ + G + IS I+ +++ +LC +A+ + V+ + Sbjct: 179 MVGLSREFAVLGKACARYPEISVHEGEAEAARMIRAAIEEPALCSRYAVRVLTDVQVGPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL+ G+R ++ +VD+TNYV L+ G P H +D +I L VRRA +GE + Sbjct: 239 PLWMQMRLRKSGVRPVNNIVDVTNYVMLELGLPLHAYDYDKIHGHSLYVRRARAGETLKT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD L+P +VIA +AGI+GG A T V++E A + +I +G+ Sbjct: 299 LDEVTRKLTPSMLVIADADAPVCLAGIMGGADAEVTARTKTVVLECASFKGSDIRHTGRA 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLI--LSLCGGTASDICIARNITYKPRKIVFM 407 LG+ +++ RFERGVD L + +S C TA I RKI F Sbjct: 359 LGLRSEASARFERGVDAACCRQALDRCAQWLQQMSAC-ETAKGIVDVYPQPEPVRKISFT 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +++ G +P E+ +L L F + + + V+VPS+R D E AD+ EE+ RIY Sbjct: 418 AAQINDFLGTSMPPEEMTDLLRTLQFDPVRQGETIVVTVPSYRGDCAEMADIAEEVARIY 477 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFG 525 G ++I S P ++V + S + + + ++L+ + E V +SF++++ + F Sbjct: 478 GYERIPST-RPWSRVSEGTE-SREHAVREKISQILSDCGLQETVTFSFMNEKSLHRLQFP 535 Query: 526 GG---QRELEILNPISADMSNMRTSLLPGLLKATGRNV----DRAIADFAIFEVSHVYEN 578 G R + ILNPI+ + +RT+LLP LL RN DRA A++E++ VY+ Sbjct: 536 AGDDVYRAVPILNPITEEYPLLRTTLLPSLLDVLVRNQAVKNDRA----ALYEIAAVYQP 591 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + + IR +G+ RL + + D +D K +V++ +L Sbjct: 592 KALPLTEQPSENIR--IAGLLYGKRLAPAWNRSEATY-DFYDVKGVVEAVLQGLGIAATL 648 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PIS 697 + AP HPGR+ + VL FGE HP + + ++ P+ F+ +I P Sbjct: 649 QPSHFAP--LHPGRAAAYVKDGQ-VLCRFGELHPRAAEQYDVAGPVYLFDFDFAAILPFV 705 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 Q +K + + RDLAF+ + + + ++I+ ++ V++FD++QG Sbjct: 706 QDLPAYSKP----ARFPAMSRDLAFLAPESVTNRQITDVIQQYGGSYLERVSLFDLYQGA 761 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 + +G KS+A ++ + + T D DI+ +D I+ + + N LR S Sbjct: 762 PVPQGYKSLAYSLVFRSPEGTLADADIQEALDAIIATLKVQLNCQLRES 810 >gi|253733627|ref|ZP_04867792.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus TCH130] gi|253728327|gb|EES97056.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus TCH130] Length = 800 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 241/821 (29%), Positives = 418/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKPDTTSNELELSANNELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + Sbjct: 298 LDGTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVV----NQWQGKKET----VDFYLAKGIVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEHGAVIR 800 >gi|116492490|ref|YP_804225.1| phenylalanyl-tRNA synthetase beta subunit [Pediococcus pentosaceus ATCC 25745] gi|116102640|gb|ABJ67783.1| phenylalanyl-tRNA synthetase beta subunit [Pediococcus pentosaceus ATCC 25745] Length = 809 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 225/833 (27%), Positives = 423/833 (50%), Gaps = 54/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MK + WL +L+ D+ + + + + +EV+ V + L + L V +PD D Sbjct: 1 MKLSYKWLSKYLELDLEPKDLAEKIERTAVEVDSVTRLDYKLKKIVVGHTLEVTEHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + IQ+VCGAPN+ + A GS I ++N+ + K+RG+ S GM+ Sbjct: 61 HLHICQVDVGEEEPIQIVCGAPNIAADQDVIVALHGSRI-KDNVKIKRSKMRGVPSNGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ D+ + I P D+ V G + + L + D +ID S+TPNR D Sbjct: 120 CALQEIGYPDNVVPKDYADGIYVFPADSHVKPGDSVMEALGMDDDVIDTSVTPNRGDMFS 179 Query: 171 VRGIALDLVAAGLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + G A + +AA L + + S++++ +IK ++D+ + + + ++ V+ Sbjct: 180 MNGNAHE-IAAILDQKANFEVLKVQDEQKSADTLADQIKVEIDEQDVAPVYKLMAIENVK 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE- 285 +P W++ L G+R I+ +VD+TNY+ L G P H +D ++ T+ A +GE Sbjct: 239 IAPSPFWLQTTLMKAGIRPINNVVDVTNYIMLKYGQPLHAYDLDQLKG-QTISVAPAGEN 297 Query: 286 -KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K LD+++ DL P+++VI +DG ++AG++GG D T ++++E A++DPI I Sbjct: 298 VKFTTLDDEKRDLRPEDLVITADGTPIAMAGVMGGMATEVSDQTQNIVIEAAIFDPIKIR 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRK 403 ++ + + +++ RFERG+D + L SL+ G S + + + P Sbjct: 358 KTARYHNLHSEAAMRFERGIDYSSLDDALNEAASLVADFSQGKVMSGVVVGNDTKLNPES 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVE 461 I + + ++ G + E+ + I +RLGFS + K F+V+VP R D+ +ADL+E Sbjct: 418 ITIALARINKILGTSLTSEEVVAIFDRLGFSTELDATKQTFKVTVPVRRWDIHIEADLLE 477 Query: 462 EILRIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 E+ RI+G D + P+ L T L+ +Q R + V+ + + +++ + + Sbjct: 478 EVARIFGYDNL---PVTLPTGDPTIGQLTTEQKLMRASRTVMEGLGLTQAMSYGLTTIAK 534 Query: 521 SVLFGGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 S F G EL ++ P++ D +R +L+ GLL N R++ + A++E V+ + Sbjct: 535 SQQFVKGDHELVKVDWPMTKDREALRMNLISGLLDDIAYNKARSVENVALYEQGRVFYGN 594 Query: 580 ---TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 PE +++A I +G + + E+ + V FD K ++E ++ Sbjct: 595 GQAQPEEIEHIAGAI---------TGSMQAKSWNEKEKPVTFFDVKG----IVEQYLKNV 641 Query: 637 SLRFESGAPSWY-----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 ++ E + + HPGR+ + + V+G+ G+ HP + F + FE+ L Sbjct: 642 AVAGEVSYVADHDRQGMHPGRTADVLLDGD-VIGFIGQIHPTTAEEFKIKETYV-FELNL 699 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 I I +K+ + V+ S + RD+A +V++ + ++N+I + + V +F Sbjct: 700 TKI-IHAEKKLQHYDVI--SKYPAITRDIAILVNKEVSNTEVLNVINETKQKNLIKVELF 756 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK+L +G KS+A Q Q DT ++D I ++++N+ +K N +R Sbjct: 757 DVYEGKNLEKGMKSLAYQFTYQDTNDTLQEDAINDEFSKVIKNLEEKLNVTVR 809 >gi|168206062|ref|ZP_02632067.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens E str. JGS1987] gi|170662387|gb|EDT15070.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens E str. JGS1987] Length = 793 Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 256/842 (30%), Positives = 418/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + +I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKNINDEIKVTVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGIRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ D + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSDVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VSWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICVP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 ++ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAKLDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|302670441|ref|YP_003830401.1| phenylalanyl-tRNA synthetase beta subunit PheT [Butyrivibrio proteoclasticus B316] gi|302394914|gb|ADL33819.1| phenylalanyl-tRNA synthetase beta subunit PheT [Butyrivibrio proteoclasticus B316] Length = 806 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 253/838 (30%), Positives = 403/838 (48%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M LSWLKD +D D+ +++ L G EVE+ + + +S + +VL+ E PD Sbjct: 1 MLVPLSWLKDFVDIDIEPKELEKKLFDCGFEVEECWEVGKDVSKVVVGEVLTCEAIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVR-----KIR 110 + ++ G+H QV CGA NV+ G A G+ + E +V V K+R Sbjct: 61 LHVCTVNAGEHGTFQVCCGADNVQAGGKYPLALVGATVIETAKDHVTVVGVATIKKGKLR 120 Query: 111 GIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G +S GM+CS EL +S+D ++ P D VG + L L D I DVS+T N Sbjct: 121 GYDSEGMLCSGVELGVSEDMYPGAGYNGLLVFPEDTEVGIDVKPLLGLDDWIFDVSITAN 180 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R DC + G+A ++ AA LKEI++S ++ ++D LC + V Sbjct: 181 RPDCQSIYGLAREVAAALDKPLKEIDLSY-TETDVTNDGFSVTVEDPDLCPRYIGHYVYD 239 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACS 283 V+ +P WM++RL VG SI+ +VDITNY+ + G P H FD + + D + VRRA + Sbjct: 240 VKLAESPLWMKRRLAMVGNNSINNIVDITNYIMRELGQPMHAFDGNFLEDNKIVVRRAKA 299 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEKI+ LD E++L+ DN+VI + ++AGI+GG ++ D TT V E A + NI Sbjct: 300 GEKIVTLDENEFELTTDNLVICDGKKPVALAGIMGGLNSEIRDTTTTVTFEAAKFMRDNI 359 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 +S + LG +DS F +GV + +K + LI L G S + N K Sbjct: 360 RKSSRALGQSSDSSAAFSKGVYEYTTVIAMKRALHLIEQLGAGKVSKTHVDINTGNSLEK 419 Query: 404 IVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 M + +K+++ GI+VP ++ RIL L F D+ + +P++R+D+E+ D+ Sbjct: 420 KE-MKASIKKVNGVLGIEVPEDEIKRILTNLNFEPAINGDELTIKIPAYREDMEDYPDIA 478 Query: 461 EEILRIYGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EE++R+YG D +K L V RN L+Q +KR L ++ E +++SF S Sbjct: 479 EELIRMYGYDHVKPTFLKDAGVTMGGRN--LRQKTELKLKRALCAQGAFECMHYSFFSPS 536 Query: 520 QSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 L + ++ILNPI+ D+S MRT+L ++ A RN + + +FE+ + Sbjct: 537 DLDLLRFAEDADERTAIKILNPINEDLSLMRTTLAAQMIHAIARNQKKGTLEGRLFELGN 596 Query: 575 VY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 + D P+ + + GI G G D+F K A +V Sbjct: 597 RFIPKSLPLTDYPDEKATLCIGIF-------GEGE-------------DIFTLKGLAENV 636 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 S ++E ++ HP R+ I E V GY G+ I D + P Sbjct: 637 ATALHV--SFKYEPTTKTFLHPYRAAKISCEGEEV-GYLGQITYEIQDDTDMRIP----- 688 Query: 689 VYLDSIPIS--QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDD 746 Y+ I +S +K KT L VKRDLA I+D+ + G + I + + D Sbjct: 689 AYICEIDLSVLEKWYGKTPSFEPLPKFAVVKRDLALIMDKTVTCGEVEEAIYGSCKYVTD 748 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +FDV++G + KKS+A + P + + + +D+++ + +RS Sbjct: 749 VKLFDVYEGLPIPPTKKSMAFTITFTPKDEELTFEAVNGYVDKMLRKLSFTMGIEIRS 806 >gi|49483302|ref|YP_040526.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus MRSA252] gi|257425190|ref|ZP_05601616.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257427853|ref|ZP_05604251.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257430488|ref|ZP_05606870.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257433250|ref|ZP_05609608.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257436089|ref|ZP_05612136.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|282903687|ref|ZP_06311575.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|282905456|ref|ZP_06313311.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282908429|ref|ZP_06316260.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282910714|ref|ZP_06318517.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282913914|ref|ZP_06321701.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282918837|ref|ZP_06326572.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282923959|ref|ZP_06331635.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|283957882|ref|ZP_06375333.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|293500949|ref|ZP_06666800.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293509906|ref|ZP_06668615.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|293526493|ref|ZP_06671178.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|295427626|ref|ZP_06820258.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297591420|ref|ZP_06950058.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus MN8] gi|56749575|sp|Q6GHU6|SYFB_STAAR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49241431|emb|CAG40115.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus MRSA252] gi|257272166|gb|EEV04298.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257274694|gb|EEV06181.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 65-1322] gi|257278616|gb|EEV09235.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus 68-397] gi|257281343|gb|EEV11480.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus E1410] gi|257284371|gb|EEV14491.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M876] gi|282313931|gb|EFB44323.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282316647|gb|EFB47021.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C427] gi|282321982|gb|EFB52306.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M899] gi|282325319|gb|EFB55628.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus WBG10049] gi|282328094|gb|EFB58376.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330748|gb|EFB60262.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus Btn1260] gi|282595305|gb|EFC00269.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus C160] gi|283790031|gb|EFC28848.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus A017934/97] gi|290920565|gb|EFD97628.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M1015] gi|291095954|gb|EFE26215.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291467356|gb|EFF09873.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus M809] gi|295127984|gb|EFG57618.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16] gi|297576306|gb|EFH95022.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus MN8] gi|312438485|gb|ADQ77556.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus TCH60] gi|315193809|gb|EFU24204.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus CGS00] Length = 800 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 238/819 (29%), Positives = 412/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIFVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQVRLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVV----NQWQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I + V+G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENK-VIGFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|268609555|ref|ZP_06143282.1| phenylalanyl-tRNA synthetase subunit beta [Ruminococcus flavefaciens FD-1] Length = 818 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 243/839 (28%), Positives = 411/839 (48%), Gaps = 56/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M ++ WL D++ D+ ++ +C LT G +VE + + +S + K+LS + + D Sbjct: 1 MNLSMKWLGDYVKADMPVKDLCHALTMSGSKVECFEEEGKNISKVVVGKILSKGPHENAD 60 Query: 60 CA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G IQ+V A NV+ G L A G+ +PE + K+RG+ES GM Sbjct: 61 ALFVCQVDIGADAPIQIVTNAKNVKEGDLVPVALDGAVLPEGK--IKKCKMRGVESFGMF 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C L L+ D + + D +G + + L D I+ +T NR DC+ V Sbjct: 119 CGLDTLGLTAHDFPYADPEGVFVIEEDCQLGQDIHSAIGLDDTSIEFEITSNRPDCLSVI 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A + AA G E+N+ P I +K D+ ++ C+ + VK V+ Sbjct: 179 GLARE-TAATYGT--ELNVKAPEFKGVDGDINSMLKVDIHNTEKCQRYCAGIVKNVKIGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 +P WMR+RL+A G+R I+ VDITNYV L+ G P H FD + + VR A +GEKI+ Sbjct: 236 SPRWMRERLRASGVRPINNFVDITNYVMLEYGQPMHAFDLRYVEGAHINVRNAKNGEKIM 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ D +VIA + + ++AGI+GG+++G D+TT V+ E A ++P + ++ K Sbjct: 296 TLDGVERELTDDMLVIADEKKPVAVAGIMGGEYSGIMDDTTTVVFESAYFEPSQVRQTSK 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L + +D+ R+E+GVD + LK L+ L G + I + T K V N Sbjct: 356 KLKLKSDASSRYEKGVDRLISMTCLKRAFQLVEELGAGEVLNTVIDCDYTDKTPASVEFN 415 Query: 409 SE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +E + G D+P D ++ LERL F V + V PS+R D+ KAD+ EE+ RIY Sbjct: 416 AEWINNFLGTDIPEADMIKYLERLEFKV----ENGRVIAPSFRIDIGCKADIAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFG 525 G + I S + + +Q R ++ S E+ +SF+S + + Sbjct: 472 GYNNIPSTDFRGVA---RAEFTEEQKFARTLRNAAVSLGGYEIATYSFVSPKYFDKIRLP 528 Query: 526 GGQR---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 G + ++I+NP+ D S MRT+ +P +L N + +FE+S Y + E Sbjct: 529 EGSKLRNAVKIVNPLGEDTSVMRTTTVPSMLDVLSFNYNNRNEKACLFEISKEYLPASEE 588 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS---VIEPFVS---LD 636 K G ++G + +S E + + ++ D + +IE ++ +D Sbjct: 589 --KPYINGDTLANNGEKKHKYQYSLPDEPQRLTIGMYGGNCDFYTMKGMIEQILAELKID 646 Query: 637 SLRFESGA-------PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + ++ + S +HPGRS +I + + LG FGE HP + + + L G + Sbjct: 647 DVEYKRASDCEVFDEKSAFHPGRSAVIVKNG-VHLGIFGEIHPAVQETYEL-----GVKT 700 Query: 690 YLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDD 746 Y+ + I + K+ + L RDL+ +VD+ +P L IK V ++++ Sbjct: 701 YVAKLCIPEMMELAADKITYQPLPKFPATTRDLSLLVDEDMPVAELEKAIKGAVGKILEK 760 Query: 747 VTVFDVFQGKSLGE-GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VT+FDV++ + + GKKS+A + ++ T D+ M + ++ + A LRS Sbjct: 761 VTLFDVYRSDDMKKSGKKSIAYSISMRSHDGTLTDEQADSAMKKALK-ALSAIGAELRS 818 >gi|229823211|ref|ZP_04449280.1| hypothetical protein GCWU000282_00509 [Catonella morbi ATCC 51271] gi|229787377|gb|EEP23491.1| hypothetical protein GCWU000282_00509 [Catonella morbi ATCC 51271] Length = 808 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 242/815 (29%), Positives = 402/815 (49%), Gaps = 45/815 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + WL D+LD T ++ E + D ++ G+E+E V+N A LS + +VLSVE + D Sbjct: 1 MYLSFEWLNDYLDLTGLTGEALADRMSRTGIEIEAVENYGAQLSGLVVGQVLSVEDHADS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++ G + +Q+VCGAPNV G + A G+ + + + K+RG+ES GM Sbjct: 61 DHLHVCQVTVGDQEPLQIVCGAPNVVAGAKVIVATIGARL-AGGLKIKKGKLRGVESHGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL D + + LP DAP+G + DYL+L DPI+++S+TPNR+D + + Sbjct: 120 LCALQELGFPDSVVPKVYAEGLFLLPADAPIGADVVDYLKLDDPILELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEI-NI---SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 RG A + V A + ++ NI + + S+ ++ + DS L + + V Sbjct: 180 RGAAYE-VGAIIDQVPNFDNIHRQATQAADASLLSDVTVKISDSDLSACYQARVIDQVEI 238 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ RL G+R + +VDITNY + G P H FD + L VR A GE Sbjct: 239 KESPLWLQMRLMKAGVRPHNNIVDITNYFLMLYGQPLHAFDYDTLEHKALGVRPAREGEV 298 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ++ LD E LS ++VI R ++AG++GG D T VL+E A+++PI I ++ Sbjct: 299 LVTLDGSERYLSASDIVITDQDRAVALAGVMGGLDTEVTDKTRRVLLESAVFNPIAIRQT 358 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRKIV 405 K + ++S RFE+G++ + + + + GG + N + P ++ Sbjct: 359 SKKFNLRSESSMRFEKGINHATISEAGQEAANWMAYYSGGQVVPGLVEENHLDLNPIEVT 418 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ GID+ E+ I RLGF + + F V+VP R D+ +AD++EE+ R Sbjct: 419 VPYRAIRDKIGIDLSHEELSHIFRRLGFDLALGENSFTVTVPKRRWDISIEADILEEVAR 478 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D + + LP+ R L+ +Q R + +L + +V+++ S +Q+ L Sbjct: 479 IYGYDNLPTT-LPVVPSTPGR-LNAKQKLVRQTRNILEGLGLNQVISYVLTSPKQADLMK 536 Query: 526 GGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT 580 + L+ P+S D S +R SL P LL+ N R A +E V+ N Sbjct: 537 SKDYPVVALDFPMSEDRSVLRQSLFPALLEIAKYNAARQNPSLAFYETGKVFYGQGSNVQ 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD---S 637 P Q+ +A + SG++ S + W ++ D FD K A+ + LD S Sbjct: 597 PLEQERLAILL----SGVKES-KSWYGPAQA----YDFFDLKG-AVEAYLAAIRLDKQVS 646 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + S P HPGR+ + +++ G G+ HP + + L E+ D+I Sbjct: 647 FQAVSSYPEL-HPGRTAQVLLGDQVI-GVMGQIHPVLAKSYDLDEASFFAELDFDAILAV 704 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQG 755 Q+ + + S RDLA +VD L ++K + L+ V +FD+F Sbjct: 705 QRPALVQRPIPKYPS---TSRDLALLVDLEQDQAGLAQLMKQHGGNNLV-SVELFDLFIN 760 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 L GKKS+A +++ Q T D+D++ MDRI Sbjct: 761 LDLFRGKKSLAYRLIFQNPDKTLTDEDVQSAMDRI 795 >gi|227543956|ref|ZP_03974005.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri CF48-3A] gi|300909706|ref|ZP_07127167.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] gi|227186072|gb|EEI66143.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus reuteri CF48-3A] gi|300893571|gb|EFK86930.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus reuteri SD2112] Length = 805 Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 227/824 (27%), Positives = 410/824 (49%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WL+++LD DV+ + + + + +++ V + + L + +V+ E +PD D Sbjct: 1 MKVSYQWLQEYLDLDVAPQDLAEKIARTSVDINDVYSLSDGLKKIVVGEVVKCENHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + IQ+VCGAPNV+ G + A G+ I +N I KIRG+ES GM+ Sbjct: 61 HLHVCQVDVGEEEPIQIVCGAPNVQEGKKVIVALHGARIADNQKI-KRGKIRGVESNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ SD A I LP DA G + YL + D IID +TPNR D + + Sbjct: 120 CALQEIGFSDKIAPKDYEDGIYFLPDDAKNGDPVFKYLGMDDTIIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVA-AGL-GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A GL KE+ I + ++ L ++ ++ D+ + + + +KGV+ + Sbjct: 180 GNVNDIAAFYGLKSHFKEVAIKEEGAEKTADL-LQAEIADTKIAPTYKLRVIKGVKIAES 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ RL G+R ++ +VD+TNY+ L G P H +D ++S + VR A GEK + Sbjct: 239 PLWLQIRLWNSGIRPVNNVVDVTNYILLKYGQPLHSYDYDQLSGNNFGVRHANEGEKFVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L +++V+ D + ++AG +GG+ D+TT V +E A++DP+ + + + Sbjct: 299 LDGDEQTLKANDIVVTVDDQPVALAGTMGGEGTAVSDDTTTVALEAAIFDPVMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 L + ++S RFERG++ + L +I L GGT + I I Sbjct: 359 LDLHSESSMRFERGINPATVETALNEAAEMIKELAGGTITAGIVTGNEAPAVDTPIKLSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFS-VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +++ + G + +E I +RL F+ + + D+ V P+ R D+ ADL EEI RIY Sbjct: 419 AKINHVLGTSLTMEQVTDIFDRLAFAYTVDDDDQLTVIAPARRWDISLAADLYEEIARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP T ++ L+ +Q R + L + + +++S + E++ F Sbjct: 479 GYDNLPST-LP-TMTRNRGGLTPRQRFIRASRHDLEGMGLTQAISYSLTTVEKAKQFQIK 536 Query: 528 --QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 +++ P+S+D R +++ GLL NV R + + A++E ++ ++ P Sbjct: 537 PLAEPMKLDFPMSSDHVATRMNIVSGLLNDIAYNVARNVDNVALYEEGRIFLPMGDERPV 596 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-- 640 Q+++AA + +G++ ++ ++ + VD F K ++ + + Sbjct: 597 EQEHLAAAV---------TGQMVANSWNKKDQQVDFFQLKGIVERYLKNMGIAGKITYVP 647 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 S P HPGR+ I ++V G+ G+ HP + + V+ ++ + Sbjct: 648 TSDRPEM-HPGRTADIMVDDQLV-GFIGQVHPQTAKEYKIPETY----VFELNLELLLAA 701 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 + +S + RD+A +VD + T+V +IK + D+ +FDV+ G L Sbjct: 702 PKIENEYTPISKYPSITRDIALLVDDDVENATIVEVIKQKGGAYLKDIHLFDVYAGSHLP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q K T +D + D++ + K +A +R Sbjct: 762 AGKKSLAYTLTYQDDKGTLTEDQVNTAFDKVTAYLQDKVDAEIR 805 >gi|222529275|ref|YP_002573157.1| phenylalanyl-tRNA synthetase subunit beta [Caldicellulosiruptor bescii DSM 6725] gi|222456122|gb|ACM60384.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor bescii DSM 6725] Length = 791 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 238/825 (28%), Positives = 421/825 (51%), Gaps = 57/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MK +L WLK ++D D S++++ D LT G +VE + R E + + K+L + +P + Sbjct: 1 MKVSLEWLKSYVDIDCSVDELVDKLTMSGTKVEGYEKRLENIKNVVVGKILEISLHPHNQ 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++D K + + ++ A NV+ GL A PG+ + EN ++V + +GI S GM+ Sbjct: 61 NLFVCKVDI-KDKILTIITAAKNVKEGLYVPVAKPGAVL-ENGKTIDVLEFKGILSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL L+ ++ I+E D+ +G + L + D IID +T NR DC+ Sbjct: 119 CSLEELGLTRGEFPYADENGIFILEGMDDSMIGNDIKIALGIDDVIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 + GIA ++ A LK N+S + E I I ++ D +C+ + +K ++ Sbjct: 179 IVGIAREIAAILNKPLKFPNVSFKETDELIKNYIDNIEIQDKKICRRYIGRVIKNIKIEQ 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD ++I + VR A GEKI+ Sbjct: 239 SPLWLRRRLVACGIRPINNIVDVTNYVMLEMGQPLHAFDLNKICGRNVFVRLASDGEKII 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L ++VIA + R ++AG++GG D++T VL+E A ++P + R+ + Sbjct: 299 TLDGVERVLRSSDIVIADENRAIAVAGVMGGLDTEVDESTKVVLLESATFNPAMVRRTAR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFM 407 LG+ T++ RFE+G+ ++ +LI + G + + ++ ++ Sbjct: 359 YLGLRTEASNRFEKGLSPYFAELAIQRACALIEQIGAGEIVKGAVDTYVDPWQQVEVKAD 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEKADLVEEILR 465 S +++L G+ + ++ + IL RL +YD+ + P +R D+E+ AD+ EE++R Sbjct: 419 FSYIEKLLGLRIEKDEVVNILSRLEI----KYDEVKDVFIAPPFRTDIEDMADISEEVIR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ S + + L+ +Q +K LA+ E+ ++SF S + + Sbjct: 475 IYGYDKLPSRVFMGSAISS--GLTQKQKIVNNIKIFLANSGYYEIYSYSFESPKVYEILK 532 Query: 526 GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--- 580 G + ++ILNP+ D S MR L+ +LK N+ R I D +FE+S V++ Sbjct: 533 GYNLDDAVKILNPLGEDFSIMRMQLMSSVLKTVYLNISRNIKDVKVFELSTVFKKSNKKL 592 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + +A GSS D + +LFD + + ++F Sbjct: 593 PHEKLVLAI----GSSA--------QDFYSLKGVLENLFD-----------MLRIKDVKF 629 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 S S HP RS I T ++GY GE HP+IL+ F + + E+++D + Sbjct: 630 SSQHQNSNLHPTRSAKIYTEESFLIGYIGEVHPDILERFDIPVRVVYAELFIDE---LLE 686 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSL 758 + K+ V L ++RD AF+V + + + I K ++++ +FDV++G+ + Sbjct: 687 AEKEEKRYVQLPKYPAIERDYAFVVPDDVESRVIEEIFKKYSSDILEEFRLFDVYKGQQI 746 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G KS A + + + T D DI + ++I++ +K N LR Sbjct: 747 KQGFKSYAYRAVFRSKLKTLSDSDINQIQEKILDE-LKNYNISLR 790 >gi|146318804|ref|YP_001198516.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus suis 05ZYH33] gi|146321013|ref|YP_001200724.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus suis 98HAH33] gi|253751893|ref|YP_003025034.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|253753716|ref|YP_003026857.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|145689610|gb|ABP90116.1| Phenylalanyl-tRNA synthetase beta subunit [Streptococcus suis 05ZYH33] gi|145691819|gb|ABP92324.1| Phenylalanyl-tRNA synthetase beta subunit [Streptococcus suis 98HAH33] gi|251816182|emb|CAZ51809.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis SC84] gi|251819962|emb|CAR46088.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus suis P1/7] gi|292558468|gb|ADE31469.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus suis GZ1] gi|319758254|gb|ADV70196.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus suis JS14] Length = 799 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 231/808 (28%), Positives = 415/808 (51%), Gaps = 39/808 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D D + + + +++ G+EVE V+ + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDFDATSHDLSEKMSTTGIEVEGVEQKSAGLSKLVVGQVVSAEPIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 I +++ G+ Q+VCGAPNV+ G+ + A PG+ I N + KIRG+ES GM+C Sbjct: 61 LNICQVNVGEAI-TQIVCGAPNVKPGIKVIVALPGARIA-GNYKIKKGKIRGVESLGMLC 118 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S E+ +SD + I LP DA VG + YL+L D II++S+TPNR+D + +RG Sbjct: 119 SLSEIGVSDSVVPKVYADGIYHLPEDAVVGEPVFSYLDLDDEIIELSITPNRADALSMRG 178 Query: 174 IALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A K K + + S +E+ + D + ++ V +P Sbjct: 179 VAHEVAAIYDSKVNFKPVVLEESDKKASDVIEVAIESDK---VTAYTARVIENVTIAPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITNY+ L G P H FD + + R+A GE ++ L Sbjct: 236 QWLQNLLMNAGIRPLNNVVDITNYILLYFGQPMHAFDFDKFEGKKIVARQAKEGENLVTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E DL D++VI+ + ++ G++GG D+++ V++E AL+D +I ++ L Sbjct: 296 DGEERDLIADDIVISVADKAVALGGVMGGASTEIDNSSKTVVLEAALFDGKSIRKTSGRL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNS 409 + ++S RFE+G+++ + + ++I L GG S I A ++ + Sbjct: 356 NLRSESSSRFEKGINVATLTEAMDTAAAMIAELAGGQVLSGIVSAGSVDTSDVPVTATID 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V R G ++ I RLG G+ +F V+VP R D+ ADLVEEI RIYG Sbjct: 416 YVNRSLGTNLDYAQIADIFRRLGMETTGDASQFTVAVPRRRWDIRIPADLVEEIARIYGY 475 Query: 470 DQIKSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + + P L + ED L+L Q+ R V+ + + E+++++ + +++V F Sbjct: 476 NNL---PTTLPK-EDGTAGELTLTQNIRRQVRSLAEGAGLTEIISYALTTPDKAVEFVAR 531 Query: 528 QREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + E++ P++ D S +R +++ G+L NV R + A++E+ ++E + ++ Sbjct: 532 PTTVTELMWPMTVDRSALRQNMVSGMLDTVAYNVARKNKNLALYEIGKIFEQ-SGNPKED 590 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPF-VSLDSLRFESGA 644 + I K + + G L ++K + VD F AK ++ + + +++D + A Sbjct: 591 LPQEINKFALVLTG---LVAEKDFQTPAVPVDFFHAKGILEAIFDHYKLAVDFVATSEIA 647 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPGR+ I + V+G+ G+ HP +G+ E+ LD+I ++ Sbjct: 648 A--LHPGRTAEIHLNGA-VIGFVGQVHPQTAKDYGIPETYVA-EINLDAI---EEALQPA 700 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVFQGKSLGEGK 762 + +S V RD+A +++ + +++ I V RL VT+FDV+ G ++ GK Sbjct: 701 QPFTDISKFPAVSRDIALLLNSDVKHQDVLDAIAGAGVKRLT-KVTLFDVYAGSNIEVGK 759 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS+A + Q +D+ D+++ M++I Sbjct: 760 KSMAYNLTFQNPEDSLTDEEVAKYMEKI 787 >gi|239905702|ref|YP_002952441.1| phenylalanyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] gi|239795566|dbj|BAH74555.1| phenylalanyl-tRNA synthetase beta chain [Desulfovibrio magneticus RS-1] Length = 801 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 241/811 (29%), Positives = 399/811 (49%), Gaps = 30/811 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +LSWL++ + +++ D LT +GLE+E + N EA+ + +VL+ E +PD D Sbjct: 1 MLLSLSWLRELTPYQGTAQELADRLTMLGLEIEDIFNPFEAIMGVVVGRVLTREAHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +VCGA NV G L A G +P + + KIRG S GM+ Sbjct: 61 HLSLCTVDVGGEAPLPIVCGAANVAAGQLVPVATVGVSLP-GGLTIKKSKIRGQVSEGMI 119 Query: 119 CSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSE EL L+++ S IM LP VG L + L L ++DVS+TPNR+DC+ V GIA + Sbjct: 120 CSESELGLAEEKSPGIMVLPETCKVGTPLPEALSLDTCVLDVSITPNRADCLSVLGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A L ++ S E+ D++D C + + GV +P+ +R R Sbjct: 180 TAMAFDLPLTLPQVAYAESGPEAAKELAIDIEDPEQCPVYRAKIISGVAVAPSPDRIRWR 239 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L A+G R IS +VD TNYV + G P H FD +++ +V+ VR A GE I+ LD QE Sbjct: 240 LTAIGQRPISNIVDATNYVLFELGQPLHAFDRDKLAGNVIKVRNAAEGEAIVTLDGQERK 299 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +++I + ++AG++GG ++ +TDV++E A++ P I ++ + L + +++ Sbjct: 300 LTARDLLICDADKPVALAGVMGGANSEMAAGSTDVVLECAVFRPGTIRKTARRLALPSEA 359 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLS 415 YRFERGVD G + L V+L+L GG+A + +A + PR I F + L Sbjct: 360 SYRFERGVDQVGSVYALNRAVALMLETAGGSALPGVAMAEPKPFTPRGIGFRPARATLLL 419 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D+P + ++L LG + E D V+ PS R D+E +ADL+EE+ R+YG+D+I Sbjct: 420 GEDMPEDFCRKVLTGLGCQ-LSETDPSGVIAVTPPSHRLDLEREADLIEEVGRVYGLDRI 478 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISK-EQSVLFGGGQ 528 L +V + +S + RV A + E VN+SF+ + +L Sbjct: 479 APR---LPRVSKALDDVPAESEFGFWSRVRAFAVGLGLREAVNYSFVGHADLDILCLDAA 535 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-TPEGQKYM 587 + + NP+S D + MR L PGLL+ N+ A+ +FEV+ V+ D T E Sbjct: 536 CRVSVANPLSEDQNVMRPMLAPGLLQTVRHNLSHGNANLRLFEVARVFAADATSETSARE 595 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + G+ W +E + D+ K ++I F + + W Sbjct: 596 AGRLGIALHGLRHPDG-WPWPKDELAGYGDI---KGIVEALIAHFKLPAGIYARDDSLPW 651 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 P ++ T LG G+ P + D + + + E+ LD++ T+ + Sbjct: 652 LAP---QVVVTVGGKRLGVIGQVTPEVADAYHARHALWLAELDLDALRALADGVTRGFRT 708 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLI-DDVTVFDVFQGKSLGEGKKSVA 766 L S PV+RD+ + G ++ I I +DV + D F + E + + Sbjct: 709 --LPSFPPVRRDVTLAAPAGVAVGDVLTAIAEAKAAIFEDVLLIDAFTPERTDE--RRLT 764 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ + + T +D ++ + + +V V+ K Sbjct: 765 FRLTYRHPEKTLKDKEVDKVHEALVAAVLAK 795 >gi|332362592|gb|EGJ40391.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK355] Length = 801 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 237/827 (28%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + Q+VCGAPNV G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVCEGIKVMVALPGARIADNYKIKK-GKIRGLESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S EL +SD + I LP +A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +A + VAA K K+ + + L + + + + +A ++ V + Sbjct: 180 VAHE-VAAIYDKSVRFKDFPLVENEKQAADSLSVALETEKAPY---YAARILENVTIAPS 235 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK++ Sbjct: 236 PQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREARAGEKLVT 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +E +L ++VI + ++AG++GG +T V++E A +D I ++ Sbjct: 296 LDGEERELEVSDLVITVADKPVALAGVMGGAATEISGQSTRVVLEAANFDGKLIRKTSGR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 356 LNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVVSSL 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI RIYG Sbjct: 416 ADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIARIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ + LP + QQ R R V+ + + E++ ++ + E+++ F Sbjct: 476 YDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAIEFTLNP 533 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T ++ + Sbjct: 534 SNLTELMWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGNPKEEL 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKA------DALSVIEPFVSLDSLRF 640 I + + G L ++K + + VD F AK D L + +V+ + ++ Sbjct: 593 PNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKGVVESLFDKLGLTAEYVASNQIK- 648 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 HPGR+ +I + V G+ G+ HP + + E Y+ + +S + Sbjct: 649 ------SLHPGRTALISINGRPV-GFVGQVHPAAAKAYDIP------ETYVAELNLSAIE 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 ++ + ++ V RD+A ++ I +++ I+ + RL D+ +FD+F G Sbjct: 696 EQLQPAQPFTEITKFPAVSRDVAILLKAEITHQEVLDAIQAAGIKRLT-DIKLFDIFSGD 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 755 KLGVGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 801 >gi|256618700|ref|ZP_05475546.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|257089528|ref|ZP_05583889.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis CH188] gi|312903649|ref|ZP_07762825.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|256598227|gb|EEU17403.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis ATCC 4200] gi|256998340|gb|EEU84860.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecalis CH188] gi|310633002|gb|EFQ16285.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0635] gi|315577477|gb|EFU89668.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0630] Length = 807 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 416/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P++I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLSIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVDVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTSLDEATVNEIFEALGFAYEVNQGAYEITIPPRRWDIAIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + E Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEDEVV-GFVGQVHPTTAKAYDIP------ETYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 T+ V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VATEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG KKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGADKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|262048721|ref|ZP_06021603.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus D30] gi|259163177|gb|EEW47737.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus D30] Length = 800 Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 242/821 (29%), Positives = 418/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKSETTSNELDLSANDELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + Sbjct: 298 LDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W DK E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVVNQ----WQDKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPILAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|296270009|ref|YP_003652641.1| phenylalanyl-tRNA synthetase subunit beta [Thermobispora bispora DSM 43833] gi|296092796|gb|ADG88748.1| phenylalanyl-tRNA synthetase, beta subunit [Thermobispora bispora DSM 43833] Length = 859 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 248/884 (28%), Positives = 411/884 (46%), Gaps = 104/884 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVE----- 53 MK LSWL++++D V+ +I D LT+ G +VE + + + + +V+ +E Sbjct: 1 MKVPLSWLREYVDLPAVTAREIADRLTAAGFKVEALIPHGHEIKNVVVGRVVGIEELTGF 60 Query: 54 RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + P C R++ G+ +++CGA N VG + A PG+ +P ++ RK+ G Sbjct: 61 KKPIRYC---RVEVGEDAPREIICGATNFGVGAVVPVALPGAILP-GGFEISSRKVYGRI 116 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CSE EL +++ S IM LP D+P+G + + L L D ++++ +TP+R + +RG Sbjct: 117 SDGMICSEAELGIAEKSPGIMLLPPDSPIGADVVELLGLRDDVLELEVTPDRGYALSIRG 176 Query: 174 IALDLVAAGLGKLKE-INISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-A 230 +A ++ A ++ I P S S P I D + C F + V G+ + Sbjct: 177 VAREVAIAFDAPFRDPAAIEVPETSGSSWPASIA----DPTACDRFVLRSVSGLDTSAET 232 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WMR RL G+RSIS VD+TNYV L+ G P H FD SR++ + VRRA GE + L Sbjct: 233 PPWMRIRLFRAGMRSISLAVDVTNYVMLELGQPLHAFDRSRLNGEIVVRRARPGETLETL 292 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ +L ++++I +AG +GG H D +TD+++E A + +AR + Sbjct: 293 DHVVRELHEEDILITDSSGPIGLAGTMGGLHTEISDASTDIVIEAAHFSATGVARMSRRH 352 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+++++ RFERGVD + + V L+ L T + P I Sbjct: 353 GLVSEASRRFERGVDRELPLVASWRAVQLLAELGRATIDPGVTHAEVEVSPVTISIPADY 412 Query: 411 VKRLSGIDVPIEDSLRILERLGFSV------------------------IGEY------- 439 R++G+ P E +R LE++G +V G+ Sbjct: 413 PGRVAGVPYPRETVIRRLEQIGCTVTEGVPAQDAGPRAGHGVAATGTVSTGDLADKLAVR 472 Query: 440 --DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS--EPLPLTQVEDKRNLSLQQSRT 495 D V+ PSWR D+ + DL EE++R+ G + + S P P L+ +Q Sbjct: 473 GDDMITVTPPSWRPDLTDPNDLAEEVIRLEGYEHLPSILPPAPAGA-----GLTEEQRAL 527 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGG--------GQRELEILNPISADMSNMRTS 547 R V R LA +EV+++ F+ + F G +R +LNP+S D MRT+ Sbjct: 528 RRVGRALAYTGYVEVLSYPFVGLKD---FDGLMLPADDPRRRATRLLNPLSEDEPFMRTT 584 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 LLPGLL+ RNV R +D A+FE+ V+ + PE +A R E RL Sbjct: 585 LLPGLLRTLARNVGRGFSDVALFEIGRVFLPQEGAPEIAPVLAVDRRPTD---EELARLE 641 Query: 606 SDKSEERCRFVDLFDAKAD------------------ALSVIEPFVSLDSLRFESGAPSW 647 + + R + +A+ A V+ ++ LR + + Sbjct: 642 AALPRQPLRVAVVLAGEAERSGWWGQGRGASWADAIQAARVVAREYGVE-LRVRAVEHAP 700 Query: 648 YHPGRSGIIKTSAE-----IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +HPGR + + E +V+G+ GE HP +++ FGL E+ L S + + Sbjct: 701 WHPGRCAELSVAGEASGEPVVVGHAGELHPRVVEAFGLPPRTAAMELEL-----SLLRPS 755 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 + +S+ +D+A +V P + ++ L++ V +FDV+ G +GEG Sbjct: 756 GPVQAPAISTYPVATQDVALVVPADTPVAEVEAALREGAGELLESVRLFDVYTGPQVGEG 815 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 KS+A + + T ++ D V ++T A LR + Sbjct: 816 NKSLAYTLRFRAPDRTLTVEETTAARDAAVALAAERTGARLRGA 859 >gi|56964444|ref|YP_176175.1| phenylalanyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] gi|66773878|sp|Q5WEJ6|SYFB_BACSK RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56910687|dbj|BAD65214.1| phenylalanyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] Length = 808 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 228/828 (27%), Positives = 407/828 (49%), Gaps = 44/828 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 M + WL+++++ D+S ++I + +T G+E++ + R + +V V V +PD Sbjct: 1 MLVSYKWLQEYIEIGDISPQEIAEKMTRSGIEIDFIHERNKGATNVVVGYVAEVAPHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + +Q+VCGAPNV G A G+ +P + + K+RG S GM Sbjct: 61 DKLNVCQVDIGEEERVQIVCGAPNVSSGQYVAVAKVGARLP-GGIKIKKAKLRGQHSNGM 119 Query: 118 MCSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 +CS +EL + D + G EL+D ++++ LTPNRSDC+ Sbjct: 120 ICSLQELGIDSKLVPKGYVDGIYVFPETQSVEPGQDALAIFELNDSVLELDLTPNRSDCM 179 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 + G+A +L A +K ES I +++ + +K V+ Sbjct: 180 HMLGVAYELAALYDRPIKMPKTKVKEVIESADGYINVSVENGEDTPFYQALVIKDVKIGP 239 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P+W++ RL A G+R IS +VD+TNYV L+ G P H FD + S + VRRA + E Sbjct: 240 SPSWLQNRLMAAGIRPISNVVDVTNYVLLEYGQPLHAFDYHALASKSIHVRRAKAEEAFT 299 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD ++ LSP+ +V+ + ++AG++GG H+ TT V++E A + P + RS + Sbjct: 300 TLDGEKRTLSPEQLVVTNGREPVALAGVMGGLHSEVTAATTTVVLEAAAFHPTVVRRSAR 359 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFM 407 G+ +DS RFE+G++ + + + LI + GG S IA R I Sbjct: 360 LAGLRSDSSARFEKGINQERVSEAARRAAYLIQEIAGGIVLSGAAIADARVRSERVIALD 419 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++ G ++ I + ++ RL F V+VP R D+ DL EE+ R+Y Sbjct: 420 LDKMNERIGTNLSIMEVAALMRRLQFPCEKVGSDLHVTVPHRRGDITIPEDLYEEVARLY 479 Query: 468 GVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D++ S LP+ + KR + +Q++ R ++ L S + E ++++ S E++ LF Sbjct: 480 GYDELPS-TLPVGNTTQGKR--TAEQAKRRKMEAYLRSAGLSEAISYALTSSEKAALFAA 536 Query: 527 GQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT--- 580 + +++ P+S + S MRTSLLP L N++R D ++E V+ E +T Sbjct: 537 ETIKPIQVAMPMSEERSTMRTSLLPHLYDICTYNLNRKNNDVLLYERGSVFLSEQETLTE 596 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+ +A + SG S + + VD + K A ++E + + Sbjct: 597 LPTEQERLAVLL---------SGTYMSHPWQGEKKAVDFYVLKGIAEGLMETLGLSEQIE 647 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ +HPGR+ + E + G+ + HP+ L+ E Y+ + + Sbjct: 648 YKPDVRPGFHPGRTANVLLKGESI-GFLAQVHPSTQKALDLN------ETYVLELNVDAL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 +T+ +++ + + RD+A +V + A L+ II+ L++ V++FDV++G+ Sbjct: 701 FAAETEALIYRGIPRYPAITRDMALVVSKETTAAELMAIIREAGGELLETVSIFDVYEGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + GKKS+A + + + T D++ + + IV V K+T AVLR+ Sbjct: 761 HMESGKKSIAFSLTYRHAERTLTDEEASLAHEGIVAEVQKQTGAVLRA 808 >gi|313901110|ref|ZP_07834598.1| phenylalanine--tRNA ligase, beta subunit [Clostridium sp. HGF2] gi|312954068|gb|EFR35748.1| phenylalanine--tRNA ligase, beta subunit [Clostridium sp. HGF2] Length = 800 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 247/829 (29%), Positives = 420/829 (50%), Gaps = 54/829 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MK + WL ++D +D+S+E+I D +TS GLEVE ++ S I KV+S E +PD D Sbjct: 1 MKISKKWLSQYMDLSDMSIEEIADKITSAGLEVEGIEKMSQGSNLVIGKVISCEDHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G E Q+VCGAPNV G + A G+ + ++ V IRG ES GM+ Sbjct: 61 HLHVCQVDLGDKIE-QIVCGAPNVTAGQKVIVARVGAKLLGGDIKAGV--IRGQESNGMI 117 Query: 119 CSEKEL-----MLSDDSASIME-LPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCIGV 171 CS EL LS++S + +E L DAPVG YL L D I+DV LTPNR+DC+ Sbjct: 118 CSLLELGVDPHQLSEESKNGIEVLDEDAPVGNENPLGYLALDDEILDVGLTPNRNDCMAA 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVA 230 +AL+ G KE+NI + ++ + + ++ C F + V + Sbjct: 178 WSMALE---TGAILHKEVNIPYVEGASNVGEASRLIVRSETEKCPLFLGKVINSVTIKPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++ L A G++SI+ +VDI+N V L+ G P H +D I + +TV+ + A Sbjct: 235 PKWMQELLMAAGMKSINNVVDISNIVMLETGQPLHFYDLDAIPAQEITVKDQQRFD-YTA 293 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + Y + D++VI ++G+ IAGI+GG + ++ T +++E A++ ++I + + Sbjct: 294 LDGESYHIEEDDIVITTEGKPIGIAGIMGGDDSKIEETTKGIIIEAAIFHHVSIRNTSRR 353 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVFMN 408 L + TD+ R+++G++ + V L++ + + Y P + Sbjct: 354 LNLGTDASVRYQKGIEPMATFKAVDRAVQLLIEYADASGLEETKQYGSNGYTPLEFDVNL 413 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + L G D E+ +++L+ L V +PS+R D+ +AD+ EEI+RI G Sbjct: 414 DRINVLLGTDFQQEEVMKVLDDLHLEPSVNNSDIHVKIPSYRMDLAIEADIAEEIIRILG 473 Query: 469 VDQIKSE--PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVL 523 +++ S +P T R QQ R +Y + +L+ E V +S + K E +V+ Sbjct: 474 YERLPSTMPKMPSTVGALNRR---QQLRRKY-RNMLSDLGYNEAVTYSLVGKKEIEDAVM 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + +E+ P+S D +R S+LP LL+ N R+I D A+FE+S+VY E Sbjct: 530 --PHKDIVELAAPMSEDHKYVRDSILPSLLECVAYNQARSIKDIALFEISNVYGLGHVEE 587 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFES 642 + +AA SG L ++ ++ VD + K +++E S + F+ Sbjct: 588 RLAVAA-----------SGALQENRWQKFRMEVDFYTVKGLVEALLESIGYQGSRVVFKE 636 Query: 643 GAPS--WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 +HP RS + E+ LG G+ HP + + ++ + E+ L+ + K Sbjct: 637 NHTDIVHFHPYRSAEVYLGREL-LGLVGQIHPKMAQAYDITETLA-LEINLE---VLLKN 691 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-----IDDVTVFDVFQG 755 + K +S + RDLAF+V + + +++ IK +L I +V VFDV+ G Sbjct: 692 KPGKVKFTEVSKYPSISRDLAFVVKEDVKVADIISSIKKNGKLEKENIIQNVEVFDVYTG 751 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + +G KS+A+ ++ Q + T +D DI + +RI+E + K +A LR+ Sbjct: 752 EHVEKGSKSIALSIVFQSAQRTLKDADINEIHNRILETLEKDLHAQLRA 800 >gi|87161618|ref|YP_493736.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|161509313|ref|YP_001574972.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|284024064|ref|ZP_06378462.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus 132] gi|294848129|ref|ZP_06788876.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9754] gi|93140711|sp|Q2FHU2|SYFB_STAA3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|87127592|gb|ABD22106.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|160368122|gb|ABX29093.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|294824929|gb|EFG41351.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9754] gi|315196862|gb|EFU27205.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320141046|gb|EFW32893.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus MRSA131] gi|320143103|gb|EFW34893.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus MRSA177] Length = 800 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 242/821 (29%), Positives = 418/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKPETTSNELDLSANDELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + Sbjct: 298 LDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W DK E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVVNQ----WQDKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPILAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|288817364|ref|YP_003431711.1| phenylalanyl-tRNA synthetase beta chain [Hydrogenobacter thermophilus TK-6] gi|288786763|dbj|BAI68510.1| phenylalanyl-tRNA synthetase beta chain [Hydrogenobacter thermophilus TK-6] gi|308750971|gb|ADO44454.1| phenylalanyl-tRNA synthetase, beta subunit [Hydrogenobacter thermophilus TK-6] Length = 771 Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 245/815 (30%), Positives = 415/815 (50%), Gaps = 56/815 (6%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICD--TLTSIGLEVEKVDNREALSPFTIVKVLSVERNP- 56 MK +WL + +D D+S E I TL S+ V+K D L KV+ + +P Sbjct: 1 MKVPYTWLIELVDVQDISPEDIARELTLKSVETSVQKFDA--DLDGVVFGKVVEMREHPT 58 Query: 57 DLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 + + R+D G V+ G ++++G A PG+ + E + + R+ G+ S G Sbjct: 59 KKNLLVCRLDVGGGYHPTVITGDRSLKLGDGVFLALPGAKVGE--LCITKREFDGVVSEG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+ S +EL L S ++++ + G D L + ++++ +TPNR D + VRG+A Sbjct: 117 MLLSAQELGLEPHSEGVLKIWEEIKPGTSAYDLLGFGEYLLELEITPNRGDLLSVRGVAR 176 Query: 177 DLVA---AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 ++ A L K KE++ E L+I+ D CK + ++GV +P W Sbjct: 177 EVCAIFRRNLKKDKEVSFE-----EFGELDIQIIDRD---CKRYRGALIEGVSVKDSPLW 228 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +R+RL G+RSI+ +VDITNY+ L G P H FDA ++S + VR A GE+I L Sbjct: 229 LRRRLWQCGVRSINNVVDITNYIMLRDGQPLHAFDADKLSGGIRVRSAKKGERIALLTGA 288 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L+ DN+VIA + + ++AG++GG+ +G + ++ +L+E A ++P + RS K + Sbjct: 289 EKTLTEDNLVIADEEKPLAVAGVVGGQESGVNHSSRRILLESAYFEPYRVRRSSKAISTQ 348 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 TDS YRFER VD++G+ + LIL + GGT + + A Y+P+ I + +R Sbjct: 349 TDSSYRFERNVDIEGVKRYQDLAIELILEVAGGTLTALRDAYPSPYQPKTIFLSLEKYRR 408 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQI 472 +G + E++ IL +LG EV VPS R D++ D++EEILRI G + + Sbjct: 409 YAGETLNREEASEILTKLGIPNSPMRCGVEVYVPSHRSYDMQRDVDIIEEILRIKGYNSL 468 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 SE L L + + +S T V+ +L SR ++E++++SF L + + Sbjct: 469 PSEVLSLPSLPFE-----HKSITDKVRELLKSRGLLEIISFSFEDLSLYELLDIEKPTIS 523 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ-KYMAAGI 591 I NP+ + + MRTSL+P LL+ N + D A+FEV VY + E + + G+ Sbjct: 524 ITNPLVKNQAYMRTSLIPSLLRTCLYNQRQHNYDMALFEVGRVYTHQGEEERVGILLTGV 583 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW--YH 649 R RL+ +++ A DALS++ + L+ ES + S+ H Sbjct: 584 R----------RLYPQ---------EVYTA-YDALSLLIDVGRILGLKMESQSSSYGFLH 623 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + E V G+ G+ P I++ L + E+ L I + KTK Sbjct: 624 PYVQTDLVLENEKV-GFVGQLSPRIVNTLELKGKVFIGELRLLHI------QQKTKLYKP 676 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 S PV RDL+ +VD+ + L++ +N + +++V VF ++ G LGEGKKSV+ + Sbjct: 677 FSKYPPVIRDLSVVVDKGVAVDKLISHTQNLLKEKLEEVKVFSIYTGSELGEGKKSVSFR 736 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ + + + D ++ L+++++ ++ A LR Sbjct: 737 LVFRSFEGSMSDGEVNGLVNKLISSLEDSFGARLR 771 >gi|313884632|ref|ZP_07818390.1| phenylalanine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] gi|312620142|gb|EFR31573.1| phenylalanine--tRNA ligase, beta subunit [Eremococcus coleocola ACS-139-V-Col8] Length = 809 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 234/812 (28%), Positives = 406/812 (50%), Gaps = 36/812 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL D LD T V +++ + ++ G+E+E V N + LS + +VL + +PD Sbjct: 1 MLVSFEWLSDFLDMTGVQGQELAELMSRTGIEIESVINYGQDLSNLVVGQVLKLIDHPDS 60 Query: 59 D-CAILRIDTGKHQEI--QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D + ++ G + + Q+VCGAPN+ G + A PG+ +P + + + KIRG S Sbjct: 61 DHLHVAQVQVGSYGDAVQQIVCGAPNIEAGQKVMVALPGATLP-SGVTIKAGKIRGQASN 119 Query: 116 GMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS EL D + I LP DAPVG L +YL+L DPI+++ +TPNR+D + Sbjct: 120 GMICSLGELGFPDSVVPKAYANGIYILPEDAPVGQDLIEYLKLDDPILELDITPNRADVL 179 Query: 170 GVRGIALDLVAAGLGKLKEINI--SCPL--SSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + G A + + A L + +N+ PL +E ++K +++ L + + V+ + Sbjct: 180 SMVGSAYE-IGAILDQKPIMNLLEDLPLVEDNEGALGQVKVSIEED-LASHYQLHLVENI 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 +P W++ RL G+R I+ +VD+TNY + G P H FD + S ++V RA +G Sbjct: 238 TVAESPLWLQMRLMKAGIRPINNIVDVTNYYLIQYGQPMHAFDLDTLPSKEISVARAHAG 297 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E LD + L+ ++V+I S R ++AG++GG + D T +VL+E A+++ N+ Sbjct: 298 ETFTTLDEIDRKLTAEDVLIKSGDRAIALAGVMGGLDSEVTDQTKNVLLETAIFNSANVR 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-ITYKPRK 403 ++ + L + ++S RFE+G++ + L+ L G D + N Y P K Sbjct: 358 KTSRRLALRSESSARFEKGINKDTVTEAGDQAAGLMALLGQGQVVDGFVEENHQNYSPLK 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 I ++V G+D+ + I RL F D FEV+VP+ R D+ +AD++EEI Sbjct: 418 IKMTYAQVADQLGVDLSSDQIGHIFNRLNFDCQLSKDSFEVTVPNRRWDIFIQADILEEI 477 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG D I + LP + +LS Q+ R+ +++L + E++ + SK+++ L Sbjct: 478 ARIYGYDNIPT-TLPSGETT-PGHLSKAQAFARHSRQILEGLGLNEIITYGLTSKDKAQL 535 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 E+ P+S + + +R S+ P L+ N +R A +E+ V+ ++ Sbjct: 536 IQDKSYGFVELDWPMSEERTVLRQSMFPALMDVAMYNANRKNTGLAFYEIGRVFLSEDKH 595 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q I + I SG+ ++ + R D FD K + E D + + S Sbjct: 596 KQP-----IEEERLSILLSGQNEANTWYGKDRKYDFFDLKGIFEAYFETVRLSDHITYRS 650 Query: 643 GAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 HPGR+ I + + G+FG+ HP + L + EV + + +Q + Sbjct: 651 KNDLPVMHPGRTAAILLDGQEI-GFFGQVHPQTARDYDLDDTTFFGEVRVADLIAAQAEI 709 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 + RD+A +VD+ +LV IIK D+L+ + +FD +QG + Sbjct: 710 ITQAPIPRFPE---TSRDIALLVDEKQSHASLVEIIKAQAGDKLV-GLDLFDRYQGDHIA 765 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 GK+S+A ++ Q + T DD ++ MD+++ Sbjct: 766 AGKQSLAYRLTFQDPQATLTDDQVQAAMDQVL 797 >gi|170077073|ref|YP_001733711.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. PCC 7002] gi|169884742|gb|ACA98455.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7002] Length = 809 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 245/848 (28%), Positives = 423/848 (49%), Gaps = 83/848 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WLK+ ++ +S E++ TLT G EVE++++R L+ +V KV+S E +PD D Sbjct: 1 MRISLNWLKEFVEITLSPEELAKTLTIAGFEVEEIEDRRRLANGVVVGKVVSREPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +VCGA NVR + A G+ +P ++ + K+RG++S+GM+ Sbjct: 61 KLSVCQVDIGADELSTIVCGAKNVRADIFVPVATLGTYLPTIDLKLKPTKLRGVKSSGMI 120 Query: 119 CSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL L DS I E P D G + L L D ++D++ T NR+D + + G+A Sbjct: 121 CSLSELGLEKDSEGIHIFEQP-DLKPGMDVRPLLGLDDVVLDLTATANRADALSMVGVAR 179 Query: 177 DLVAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 ++ A L +++ P + ++ P + + D C + ++GV +P+W+ Sbjct: 180 EVAA-----LTGVDVKLPEIPAMDTAPETLTITVADPVACPAYLGTVIEGVTTAPSPDWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 + RL+A G R I+ +VDITNYV L+ G P H FD R++ V L VR A +GE + Sbjct: 235 KFRLQAAGTRPINNVVDITNYVLLEWGQPLHAFDRERLAQVAGSETVALGVRFAKAGEML 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD QE L+ N+VI ++ ++AG++GG+ + T ++++E AL++P+ I RS Sbjct: 295 TTLDGQERKLAEKNLVITANDVPVALAGVMGGESTEVHNGTQNIVLEAALFEPVTIRRSS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT---YKPRKI 404 + +G+ ++S R+ERGV+ + + ++L+ L GGT + R +T P Sbjct: 355 RAVGLWSESSTRYERGVNQVELDRAAQRAIALLQELTGGT----VVQRGLTDTRPDPNAR 410 Query: 405 VFMNSEVKRLSGI-----------DVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWR- 450 + ++RL + DVP+ D RIL LG ++ GE +EV+VP +R Sbjct: 411 PKIPLRLQRLHEVLGHVHKDGKIFDVPLADVERILADLGCTLESTGE-GVWEVAVPPYRY 469 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 +D+E + DL+EE+ R+YG D + LP LS + R ++ + + EV Sbjct: 470 RDLEREIDLIEEVARLYGYDNF-CDTLPSQSAAG--FLSPAEKVNRQLRGSFRAIGLTEV 526 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 V++S + E + ++++ NP+ + S +R LL GL+ A N + F Sbjct: 527 VHYSLVKPELA--------DIKLSNPLFVEYSALRKELLTGLIDAFAYNQSQGNGALNAF 578 Query: 571 EVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 E+ V+ +N+ Y+ AGI G+ +GS W+ K +S Sbjct: 579 ELGRVFWLDDNENYAEADYL-AGILGGNLNPDGS---WA------------VGGKGQPMS 622 Query: 628 VIEPFVSLDSLRFESGAPSWY---------HPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 E LD+ + G Y HPGR+ + LG FG+ HP + Sbjct: 623 WYEAKGFLDAAFRQLGLEVSYRADTSNEKLHPGRTASLWLQGR-QLGIFGQLHPQLRQEK 681 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII 737 L + + FE+ LD + + ++ + S +P V RDLAF L + Sbjct: 682 DLIDAVYVFELKLDLLQTVLSRPSQQVPIFKAFSTYPAVTRDLAFFAPLETSVADLEQAM 741 Query: 738 -KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 K +L+ V +FD ++G+ EG++S+A + + T D++I + ++ + +VK Sbjct: 742 QKTAKKLLAGVELFDEYRGEHAPEGQRSLAFSLQYRAADKTLTDEEIDPVHQKVRDALVK 801 Query: 797 KTNAVLRS 804 + LRS Sbjct: 802 QFAVTLRS 809 >gi|256830755|ref|YP_003159483.1| phenylalanyl-tRNA synthetase subunit beta [Desulfomicrobium baculatum DSM 4028] gi|256579931|gb|ACU91067.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfomicrobium baculatum DSM 4028] Length = 793 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 235/810 (29%), Positives = 415/810 (51%), Gaps = 36/810 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WL++ + + ++ + D LT +GLEVE++ N AL + VL +P D Sbjct: 1 MLLSLNWLREFVPYEGDVKALGDRLTMLGLEVEEIANPFAALEKIVVGHVLERAVHPSSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNV G AP G+ +P +++ K+RG S GM+ Sbjct: 61 HLSVCKVDIGTGEILDIVCGAPNVAAGQKVPVAPVGTTMP-GGLVIKKAKLRGEPSCGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L + IM L G + D L L ++DVS+TPNR+DC+ V G+A + Sbjct: 120 CSERELALGEGHEGIMVLDQALVPGTPICDALGLDQVVLDVSITPNRADCLSVLGLARE- 178 Query: 179 VAAGLGKLKEINISCPLS--SESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVAPNWMR 235 VAA G + ++ P + +ES F ++ D+ LC + ++ V+ +P+W+R Sbjct: 179 VAAAFG----LPLTIPQAELAESGEPFAGFAIEPDAELCPLYQARLIRDVKIAPSPDWLR 234 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 RL AVGLR I+ +VD+TNYV ++ G P H FD + + + V RA G ++ LD Q+ Sbjct: 235 YRLLAVGLRPINNIVDVTNYVMMECGQPLHAFDRELLRGNRIRVERAQEGMTLITLDGQD 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +V+I D + ++AG++GG ++ + VL+E A++DP +I ++ + LG+ + Sbjct: 295 RTLTAKDVLIWDDEQPVALAGVMGGANSEIGAGSATVLLESAVFDPASIRKTARRLGLSS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKR 413 D+ YRFERGVD G + SL+ ++ GG A + A + PR I F ++ R Sbjct: 355 DASYRFERGVDQIGNTHAMNRAASLMAAVSGGAVAPGVAKAEPRPFSPRIIPFAPAKATR 414 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++ E L RLG V+ + ++V+ PS+R D+E + DL+EE+ R+YG+D+I+ Sbjct: 415 LLGVEMSPEFCRETLTRLG-CVVAPGEPWQVTAPSFRLDLEREVDLIEEVARVYGMDRIE 473 Query: 474 SE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-GGQREL 531 + P + D + VK + EVVN+SF+ G + + Sbjct: 474 AVLPTVTKSLADLDKADPTFAFLSQVKDWGRGAGLAEVVNYSFVGTADLDRCGLPLEGRV 533 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 I NP+S +M+ +RT L PG+L + +N+ + IFEV+H + D P Sbjct: 534 HIFNPLSEEMNVLRTELAPGMLGSLRQNMSQDNTRIRIFEVAHSFVQD-PGSDTLTRENN 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFESGAPSWY 648 R G + GR + RF AD ++E + + + FE G Y Sbjct: 593 RLGI--LLHGGRFPARYPYPEGRF-----GYADIKGLVEHLLLTLGVGAASFERGGEHAY 645 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 I+ + ++V+G G ++ D + + E+ LD + + + K + Sbjct: 646 LAPE--ILVRAGDVVVGRVGMIREDLADAYQARGEVWYAELDLDLL-MGLRLHVAFKAIP 702 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAI 767 V+RD+ + + + G +V+ +K + L+ DV + DV+ + G ++++ Sbjct: 703 KFPV---VRRDMTLVAPESLAIGAVVDTVKEMQEPLLTDVFLVDVYAPE--GSAERNLTY 757 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + + + + T +D ++ + RI +++V++ Sbjct: 758 RFVYRHAERTLKDKEVEKINLRIGQHLVER 787 >gi|323440688|gb|EGA98398.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus O11] gi|323442369|gb|EGA99998.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus O46] Length = 800 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHNVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHIFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKEA----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|329944491|ref|ZP_08292656.1| phenylalanine--tRNA ligase, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] gi|328530256|gb|EGF57135.1| phenylalanine--tRNA ligase, beta subunit [Actinomyces sp. oral taxon 170 str. F0386] Length = 885 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 251/906 (27%), Positives = 413/906 (45%), Gaps = 132/906 (14%) Query: 5 LSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+D L E++ L +GLE E++ P + KVL+ E + I Sbjct: 6 IEWLREHVDVPAGLSAEQLAADLVRVGLEEERIVPPAVTGPLVVGKVLTREAKEQSNGKI 65 Query: 63 L---RIDTG-KHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + R+D G +H + +VCGA N VG V + PG+ +P + + Sbjct: 66 INYCRVDVGPEHNDAPGTGKEPSELPSRGIVCGAHNFDVGDSVVVSLPGAVLP-GDFRIA 124 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPI----------DAPVGGRLS-DYLELSD 154 RK G S GM+CS +EL + +D + I+ L + P G + L L + Sbjct: 125 ARKTYGHVSDGMICSARELGIGEDHSGIIVLQQWLAEHGHEDEEPPAPGTDAIGILGLGE 184 Query: 155 PIIDVSLTPNRSDCIGVRGIALD-------------------LVAAGLGKLKEINISCPL 195 ++++++TP+R C +RG+A + L GL + E + Sbjct: 185 EVLEINVTPDRGYCFSMRGVAREYSHSTGARFTDPADATDTGLYPNGLAPVGESGFDVVV 244 Query: 196 SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITN 254 + P+ + C + V+G+ + +P WM+ RL A G+R IS VD+TN Sbjct: 245 PEDPRPIHGRPG------CDRYVARVVRGIDPSAPSPTWMQDRLAAAGMRPISLAVDVTN 298 Query: 255 YVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GR 309 YV LD G P H FDA +++ + VRRA GE + LD+ L P+++VIA R Sbjct: 299 YVMLDLGQPLHAFDAGKLAAPIVVRRAKEGETLTFLDDVTRTLDPEDLVIADSPEGEGSR 358 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGM 369 +AG+ GG + D T DVL+E A +DP+++ARS + + T+S R ERGVD + Sbjct: 359 ALVLAGVFGGALSEVDAGTCDVLIEAAHFDPVSVARSARRHKLPTESSKRNERGVDTELA 418 Query: 370 IPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILE 429 + V L++ GG+A + N T P I+ + +RL+G+ I+ +L Sbjct: 419 PIAAQRAVDLLVEYGGGSAEPVATDINRTRAPEPIIMRSDAAERLTGVAYGIDRVTDLLA 478 Query: 430 RLGFSV--IGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 +G +V G D V+ P+WR D+ A LVEEI R+ G D I P+ Sbjct: 479 TIGCTVERSGSTDDGTALLTVTPPTWRPDLVGPAHLVEEIARLDGYDAI---PVIAPTAA 535 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL----FGGGQRELEILNPISA 539 LS Q R V R LA + +V+++ FI L ++ + + NP++ Sbjct: 536 AGTGLSADQKARRDVVRALADAGLTQVLSYPFIGDIHDRLEIPETDARRQTVRLANPLAE 595 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--------------NDTPEGQK 585 D +RTS+L L++ RNV R +AD A+FE+ V T + Sbjct: 596 DAPYLRTSILDSLVEVARRNVSRGLADAAVFEIGSVTHPAGTVPAPIPGTDRRPTEAEKA 655 Query: 586 YMAAGI-------------RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 + AGI SG+ G+GR W ADA+ V+ Sbjct: 656 ALRAGIPAQPTHIGAVMVGEHERSGVLGAGRPWD---------------WADAVEVVRTV 700 Query: 633 VSLDSLRFESGAP----SWYHPGRSGIIKTSAE---------IVLGYFGEFHPNILDFFG 679 + + AP + +HPGR+ I+ + +++ + GE HP ++ G Sbjct: 701 AATLGVEVVVSAPEQPYAPWHPGRTAEIRLPGQRRGKEIEPGVLVAHAGELHPRVVRELG 760 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 L C E+ LD + + +V +S+ K D+A +VD+ + A + ++++ Sbjct: 761 LPERACAVEIDLDPL-LEAAHDAGELQVRAVSTFPAAKEDIALVVDEAVTAAEVEDLVRR 819 Query: 740 -VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 L ++V +FDVF+G LGEGKKS+A+ ++++ T ++ + R+++ K Sbjct: 820 AAGDLAEEVRLFDVFRGAQLGEGKKSLAVSLVLRAPDRTLTAEETAGVRKRVIKRAAKLL 879 Query: 799 NAVLRS 804 A LRS Sbjct: 880 GAELRS 885 >gi|110802833|ref|YP_699165.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium perfringens SM101] gi|110683334|gb|ABG86704.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens SM101] Length = 793 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 255/842 (30%), Positives = 417/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSES-IPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKKINDEIKVTVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ + + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSEVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VNWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICVP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|255976204|ref|ZP_05426790.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T2] gi|307278848|ref|ZP_07559911.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] gi|255969076|gb|EET99698.1| phenylalanyl-tRNA synthetase [Enterococcus faecalis T2] gi|306504519|gb|EFM73726.1| phenylalanyl-tRNA synthetase, beta subunit [Enterococcus faecalis TX0860] Length = 807 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 226/827 (27%), Positives = 415/827 (50%), Gaps = 44/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++++ ++V+ +++ D ++ G+EVE V E L + +V +P+ Sbjct: 1 MLVSYKWLNEYVNLSNVTPQELADKMSVTGIEVEGVAVPEEGLKKIVVGEVKECVPHPNS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+ G+ + A PGS I N I K+RG S GM Sbjct: 61 DHLSICQVDIGEEELSQIVCGAPNVKAGIKVIVALPGSRIAGNQKIKK-GKMRGEVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL SD+ + I LP +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLEELGYSDNVVPKAYAEGIYYLPQEAVNGTPVFPYLDMDDAIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 RG+A + V A + + N +S+++ + ++DS + + +K V Sbjct: 180 RGVAYE-VGAIYRQTPQFNDPELKEDASDNVGNYVTVTVEDSQDAPAYQIRVIKDVTIAE 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ RL G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA + E+++ Sbjct: 239 SPQWLQNRLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYQKLDSKEILVRRATAAEELI 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ +N+VI + +AG++GG ++ TT V +E AL++P+ I ++ K Sbjct: 299 TLDGETRQLTEENIVITNGKTPVGLAGVMGGANSEISQETTTVALEAALFNPLPIRKTSK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + ++S RFE+G++ + ++I L GT S + + K ++ Sbjct: 359 QFNLRSESSSRFEKGINQATVGLACDVAAAMIAELADGTVVSGTAVGSEVAVKEAQVAVT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + G + I E LGF+ +E+++P R D+ +AD++EE+ RIY Sbjct: 419 LERINQYLGTALDEATVNEIFEALGFAYEVNRGAYEITIPPRRWDITIEADIIEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + S LP + +L+ Q TR +K +L E ++++ ++E+S F Sbjct: 479 GYDHLPS-TLPSGETV-AGSLTKAQHVTRQLKSLLEGHGTSEAISYALTTEEKSRQFMMK 536 Query: 528 QRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDT 580 + + L P+S + S +R +L+ GLL NV R + A +EV V+ + Sbjct: 537 ESQTTRLQWPMSEERSVLRMNLISGLLDDVAYNVARKNNNIAFYEVGRVFYQTEDPTKNL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P + ++A + +G + + VD + K S++ + + + Sbjct: 597 PTEENHLALAL---------TGNTMVKDWQTKATAVDFYTVKGLVESIVAVLGLTEKISY 647 Query: 641 E-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + + A HPGR+ I E+V G+ G+ HP + + + Y+ + + Q Sbjct: 648 QATTAIPEMHPGRTAWIYLEGEVV-GFVGQVHPTTAKAYDIP------KTYVAELNLQQL 700 Query: 700 KRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + V + +S V RD+A +VD+ + LV I N + + ++ +FDV+QG+ Sbjct: 701 VAIEAGGVTYEAVSKFPAVSRDIALLVDETVTNQELVKTISDNAGKYLKEIHLFDVYQGE 760 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG GKKS+A + + T D++I M+++ + +++K +R Sbjct: 761 KLGAGKKSMAYSLTFVNAEATLVDEEINRSMEKVEKALIEKHQVEVR 807 >gi|182626135|ref|ZP_02953895.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens D str. JGS1721] gi|177908572|gb|EDT71097.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium perfringens D str. JGS1721] Length = 793 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 255/842 (30%), Positives = 418/842 (49%), Gaps = 90/842 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +WLKD++D D++ E++ D LT G +VE+V A + ++ +E++PD + Sbjct: 1 MKVPFNWLKDYVDIDMTAEELGDALTLSGSKVEEVVTAGAEIENIVTCQIDKIEQHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVR------VGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 I +++ G IQ+V A N++ V L G GS I + K+RG Sbjct: 61 KLKICQVNIGSEM-IQIVTAADNMKEHDKVPVALHGAILADGSKIKKG-------KLRGE 112 Query: 113 ESTGMMCSEKELMLSDDSASI--MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM CSE+EL ++D I M LP DAP+G + +YL L+ ++D +T NR DC+ Sbjct: 113 VSNGMFCSEEELGIADGKEVIGLMILPEDAPIGVCIKEYLGLNKQVLDFEITSNRPDCLS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + A + N + + +I EIK ++D LC + VK V+ Sbjct: 173 VLGMARETAATTRKTYRMPNTKFEVKCDKNINDEIKVTVNDK-LCNRYMARGVKNVKVAP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VDITN+V L+ G P H FD + S + V RA G+K + Sbjct: 232 SPTWMQERLLDAGVRPINNIVDITNFVMLELGQPMHAFDRRELKSSNIVVERAKDGDKFV 291 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E +L+ + + I I ++AGI+GG ++G D+TT+++ E A +D NI + K Sbjct: 292 TLDEIERELNSEVLCIKDGEEIVALAGIMGGLNSGVKDDTTEIVFESANFDGTNIRVNSK 351 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 NLG+ T+S RFE+ +D L +L+ L CG N + + + Sbjct: 352 NLGLRTESSSRFEKDIDPNLAALALDRACALVEELGCGEIMEGTIDVYNNVKEEKTLEVS 411 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + + + G + E+ R L+ L D E+ VP++R DV+ + D+ EE+ RIY Sbjct: 412 VNWINKFLGTSLEAEEMKRCLDSLDLKTTINGDTLEILVPTFRIDVDIREDVAEEVARIY 471 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------K 518 G + I + L T E + Q + + +LAS + + +++SF+S Sbjct: 472 GYNNIPA-TLISTSTEKEAKDKKQLLDEKVIDTMLAS-GLNQSISYSFVSPKVFDKICIP 529 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 E S L + ++I NP+ D S MRTS LP ++++ RN R+ +FE+ Y Sbjct: 530 EDSSL----RNVVKIKNPLGEDYSVMRTSTLPSMMESLARNYSRSNEIVRLFEIGKTYIP 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 EN+ P + + GI +C D FD K ++E Sbjct: 586 NSDENELPTERNILTIGIYG------------------QC---DYFDLKG----IVENL- 619 Query: 634 SLDSLRFESGA-------PSWYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNP 683 LDSL +S + PS YHPG++ + +TS LG GE HP++ + +G+ P Sbjct: 620 -LDSLGLKSASFKRMSENPS-YHPGKTAELILGRTS----LGVLGEIHPDVNENYGVDVP 673 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-D 741 E+ LD++ +KT+K +P + RD+A +VD + + + I+ Sbjct: 674 CYVAELDLDAM----YNFSKTEKAYKPLPKYPAITRDIALLVDDAVLVQEIEDAIRKAGG 729 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 ++++ V +FDV++G + EGKKS+A + + T +D DI + D+I+ + K A Sbjct: 730 QVVEKVELFDVYKGAQIPEGKKSIAYAIAYRDPSKTLKDKDINKVHDKILRALEYKLGAQ 789 Query: 802 LR 803 LR Sbjct: 790 LR 791 >gi|260911567|ref|ZP_05918152.1| phenylalanyl-tRNA synthetase [Prevotella sp. oral taxon 472 str. F0295] gi|260634273|gb|EEX52378.1| phenylalanyl-tRNA synthetase [Prevotella sp. oral taxon 472 str. F0295] Length = 820 Score = 317 bits (812), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 243/842 (28%), Positives = 419/842 (49%), Gaps = 61/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ +K + LTS GLEV+ ++ + L + +VL+ E +P Sbjct: 1 MNISYKWLKEYVDFDLTPQKTAEVLTSCGLEVDSLEEVQTIKGGLKGLYVGEVLTCEVHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D GK + Q+VCGAPNV G + A G+ + +N ++ K+RG+E Sbjct: 61 NSDHLHITTVDLGKGEPSQIVCGAPNVAAGQKVIVADVGAVLYDGDNEFVIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP DA VG ++Y +L SD +I++ +T N +D + Sbjct: 121 SFGMICAEDEIGVGTSHDGIIVLPADAKVGQPAAEYYQLESDWLIEIDITANHADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + + + P + + +P+ + + D+ CK +A + Sbjct: 181 GVARDLYAWLVQNGYKTALKRPSCDAFVVDNNDLPIAVTIENKDA--CKRYACVSITDCE 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L+ +GLR I+ +VDITNY+ + G P H FDA + + V+ G Sbjct: 239 VKESPEWLQNKLRTIGLRPINNIVDITNYIMMAYGQPMHCFDADMVKGHHIIVKTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAG+ GGK +G + T +V++E A + P I + Sbjct: 299 KFVTLDGEEHTLGSSDLSICNAEEPMCIAGVFGGKGSGTYETTRNVVLESAYFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ TDS YRFERG+D G + LK L L GG S +++ +P + Sbjct: 359 SARRHGLSTDSSYRFERGIDPNGTVYALKQAAILCKELAGGKIS--MEVKDVYPEPIEDF 416 Query: 406 FMN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVE 461 +N + V ++ G ++ + RI+ LG V+ E ++ ++ VP++R DV+ D+VE Sbjct: 417 DVNLKYAYVTQVIGKEIGNDVIKRIVTSLGMQVVEETNEALQLKVPAYRVDVQRPCDVVE 476 Query: 462 EILRIYGVD------QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 +ILRIYG + Q+KS L + EDK + V L E++N S Sbjct: 477 DILRIYGYNNVEIPTQLKS-SLTVLGDEDK-----EHKLETIVGEQLVGSGFNEILNNSL 530 Query: 516 ISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +E ++++NP+SAD+ MR +LL G L++ RN +R + FE Sbjct: 531 TKVAYYDGLNNYTQETCVKLINPLSADLGMMRQTLLFGGLESVSRNANRQNQNLRFFEFG 590 Query: 574 HVYE------NDTPEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 + Y ND + Y G+ +EGS W +E+ F +L + Sbjct: 591 NCYHYNPDKANDESPIKAYSEEKHLGLWLTGKRVEGS---WI-HPDEQSSFYELNGYVQN 646 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV--LGYFGEFHPNILDFFGLSN 682 + + L L +E+ + + ++ ++V LGY + I FGL++ Sbjct: 647 IFARLGIPAGL--LVYETSENNIFTYALK-VMNRGGKVVAELGYVAD---GIRKNFGLTS 700 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD- 741 + F L+ I + K + +S V RDLA ++D+ + +V + + Sbjct: 701 EV--FFADLNWTAIMKLVSKKDVEFKEISKFPAVSRDLALLLDKEVLFKDVVAVATQTEK 758 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +L+ V +FDV++GK+L +GKKS A+ ++Q T +D I +M +++ N+ K A Sbjct: 759 KLLKKVELFDVYEGKNLRQGKKSYAVNFILQDENATLKDKQIEAIMQKLIANLKGKLGAE 818 Query: 802 LR 803 LR Sbjct: 819 LR 820 >gi|213966323|ref|ZP_03394505.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium amycolatum SK46] gi|213951029|gb|EEB62429.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium amycolatum SK46] Length = 830 Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 230/806 (28%), Positives = 392/806 (48%), Gaps = 61/806 (7%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE-----RNPDLDCAILRID 66 D V+ +++ + +G E E + E + P +V +E + P C + D Sbjct: 22 DWSVTPDELDEGFVRVGFETEGHEPLEKIEGPLVFGRVDHIEELEGFKKPIRFCQVNVGD 81 Query: 67 TGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELM 125 E+Q ++CGA N G + V A PG +P ++ RK G S GM+CSE EL Sbjct: 82 ANGTGELQEIICGARNFEEGSIVVVALPGCVLP-GGFEISARKTYGKISNGMLCSEAELG 140 Query: 126 LSDDSASIMELP-IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 ++D SA I+ LP A +G +++ L + +V++TP+R + RG+ ++ +A Sbjct: 141 MTDSSAGILTLPSAPAELGSCAKEFIGLDEEKFEVNITPDRGYALSARGLGREICSA--- 197 Query: 185 KLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKA 240 ++ + P + +P+E + +D+ + + F + V G+ N P WMR+RL Sbjct: 198 --FNLDFADPAKVKELPVEGEILDVTIDEDTDTRRFGLRRVTGINPNAETPWWMRRRLLL 255 Query: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 G R ++ D+TNYV L G P H FD S+I+ L +R A +GE + LD+ + L P Sbjct: 256 AGQRPVNVATDVTNYVMLLLGQPMHAFDGSKIAGGLHIRNAKAGETLTTLDHVDRKLDPA 315 Query: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +VVI D IQS+AGI+GG + D+TTDV++E A W P+++ RSG+ + +++ RF Sbjct: 316 DVVICDDNGIQSLAGIMGGLTSEIADDTTDVVLEAANWSPLHVFRSGRRHKLSSEASRRF 375 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 ERGVD + P L L+ + GGT + + + P I F + ++G+D Sbjct: 376 ERGVDTALVEPALDLACQLLADIAGGTIDTGRTLLGEVATMP-TIDFAVNRASEIAGVDY 434 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 P E + L +G V+ D+ V+ P+WR D+ ADLVEEILR+ G++ I P+ L Sbjct: 435 PRETVIGRLREVGCEVVDNGDRLAVTPPTWRSDLTMSADLVEEILRLEGLEDI---PVIL 491 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEIL 534 R L+ +Q R R+V LA +E++ FI+ + ++G + ++++ Sbjct: 492 PIAPAGRGLTERQLRRRFVGHALAHNGYLEILPTPFIANDVFDVWGLDADDPRRNTVKVI 551 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPEGQKYMAAGIRK 593 NP+ +D + + T+LLP +L++ RNV R D +++ V V E AG+ Sbjct: 552 NPLESDHAQLGTTLLPSMLESLKRNVARGQVDLSLYGVEQVSIERGNGVSPMPSTAGLPS 611 Query: 594 GSSGIE-----------------GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + E G RL S +E V ADA+ Sbjct: 612 EAERAELLDSLPEQPLHVATVACGRIRLDSPWGDEAAYTV------ADAIEAARIVARAA 665 Query: 637 SLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ E + +HPGR + +V G+ GE HP + GL C E+ LD++ Sbjct: 666 NVELEIRNAEVLPWHPGRCAELLVDGHVV-GHAGELHPKVCKDAGLPERTCAMEINLDAL 724 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVF 753 P+++ LS V +D+A +V + A + +++ L++ + +FDV+ Sbjct: 725 PVTEHLPAPV-----LSPFPAVHQDVALVVSDEVSAAEVEKTLVEGAGELLESIRIFDVY 779 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFR 779 + + +GEG +S+A + + T + Sbjct: 780 RSEQMGEGVRSLAYSLRFRAPDRTLK 805 >gi|261367280|ref|ZP_05980163.1| phenylalanyl-tRNA synthetase, beta subunit [Subdoligranulum variabile DSM 15176] gi|282570883|gb|EFB76418.1| phenylalanyl-tRNA synthetase, beta subunit [Subdoligranulum variabile DSM 15176] Length = 807 Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 249/827 (30%), Positives = 399/827 (48%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK SWLK +++ DV+ E++ L G EVE+ +D + + V Sbjct: 1 MKVPFSWLKQYVEIDVTAEELEKKLFDCGFEVEELIDLSADIDKVVVGVVSECVPQEGTH 60 Query: 60 CAILRIDTGKH-QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G++ +IQ+ GAPNV G+ A GS +P + + + + G+ES GM+ Sbjct: 61 LHICKVDCGEYGHDIQISTGAPNVYEGMHTPAALDGSTLP-GGVKIKAKPLMGVESNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L++D +++LP D G + + L D I D+++T NR DC V Sbjct: 120 CSGEELGLNEDLYPGAEVYGLLDLPKDTVPGTPIQQVVGLDDYIFDIAVTSNRPDCQSVL 179 Query: 173 GIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA + VAA LGK LK I S + P + ++ LC + V + +P Sbjct: 180 GIARE-VAAVLGKPLKMPAIDYTESDTTDP-RLSITVEAPDLCPRYIGHYVHNITPGPSP 237 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILAL 290 WMR++L GLRSIS +VDITNYV L+ G P H FD + + VRRA GE+I L Sbjct: 238 RWMRRQLALCGLRSISNVVDITNYVMLEIGQPMHAFDMDTLESCQIIVRRAKDGEEITTL 297 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E+ L+P+N+VI + ++AG++GG ++ D TT +L E A + NI ++ + L Sbjct: 298 DGKEFKLTPNNLVICDGSKPVALAGVMGGLNSEIKDTTTQLLFESAKFARDNIRKTARGL 357 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGG-TASDICIARNITYKPRKIVFMN 408 G TD+ +E+G+ + + LI L CG TA+ + + +K Sbjct: 358 GQNTDASSHYEKGISEYTTELGMARALHLIQELGCGEVTATHFDCSAGAPREGKKFTATI 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVE-EKADLVEEILR 465 S + + GI VP + L IL RL F V + D EV+ P WR+D+E + DL EE++R Sbjct: 418 SGINAILGITVPTDAVLDILRRLQFEVELQADGDTMEVTAPRWREDIEIGEPDLAEEVIR 477 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----S 521 YG + IK L QV ++Q++R + KR + ++ E +F + Sbjct: 478 EYGYEHIKPTFLKAAQVTTGGLTTVQKARAK-AKRAMCAQGFYEAETLAFYADADLDMLH 536 Query: 522 VLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + +R + ILNPIS++++ MR+ L P LL N+ + D +FE+S++Y Sbjct: 537 IAPDAPERNVIRILNPISSNLTIMRSLLAPSLLNVVVENLKKGNNDGRLFELSNIY---I 593 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P+ Q + G W D D F K ++ F + L Sbjct: 594 PKQQPVTELPEERLHLGFAA----WGDGE-------DFFAVKGAVEALGAAFGT--DLTV 640 Query: 641 ESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFEVYLDSI--PI 696 E A +W HPG + I E + G FG+ ++ L + +YL I P Sbjct: 641 ERAADVAWLHPGIAAYILCKGERI-GVFGKLANDVTAELKLPKDSRSNQNIYLGEIDWPK 699 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGK 756 K + L PV+RDLA + + G L+ ++ + + V +FD+++G+ Sbjct: 700 FYDLVPKALHYTPIPELAPVQRDLALVAPEETECGALMAEMQRACKQLTKVELFDIYRGE 759 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G+KS+A + QP + F ++I + +I+ N+ K +R Sbjct: 760 KLGAGRKSMAFSLYFQPGEKAFTPEEIDRFIKKILGNLKFKLGIEIR 806 >gi|300865106|ref|ZP_07109931.1| phenylalanyl-tRNA synthetase subunit beta [Oscillatoria sp. PCC 6506] gi|300336877|emb|CBN55081.1| phenylalanyl-tRNA synthetase subunit beta [Oscillatoria sp. PCC 6506] Length = 819 Score = 317 bits (812), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 234/842 (27%), Positives = 431/842 (51%), Gaps = 61/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +++WL++ +D V+ E++ +TLT G EVE++++R + ++ K+L+ E++P+ D Sbjct: 1 MRISINWLRELVDIAVTPEELAETLTMAGFEVEEIEDRRTWADGVVLGKILTCEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK + + +VCGAPN R + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGKGEPLNIVCGAPNARANIYVAVATVGTYLPNIDLKIKPAKLRGVPSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ +S I ++ P +G + L L D I+D++ T NR+D + + G+A + Sbjct: 121 CSVAELGLAKESPGIHIFELENPELGSDIRPLLGLDDVILDLTATANRADALSMVGVARE 180 Query: 178 LVAAGLGKLK-----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + A L+ + I E+ L I D+ S C + ++ V+ +P Sbjct: 181 VAALTGANLRIPEAAGVLIQGQEGGETASLAI--DISQSQACPIYIGTAIEKVKIGPSPA 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGE 285 W++QRL+A G+R IS +VD+TNY+ L+ G P H FD R+ V + VR A SGE Sbjct: 239 WLQQRLQAAGVRPISNVVDVTNYILLEWGQPLHAFDRDRLEAVAGSSDLTIGVRFANSGE 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD Q +L ++I + + ++AG++GG+ + T ++++E A+++P+ I R Sbjct: 299 SLKTLDGQTRNLQAQTLLITVNDKPVALAGVMGGEETEVYEGTQNLVLEAAIFEPVAIRR 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG------TAS----DICIAR 395 S ++ G+ +++ R+ERGV+ + + + LI+ L G TAS + R Sbjct: 359 SARSQGLRSEASTRYERGVNQAELALACRRALKLIVELAEGVPVVQETASIGVDKSNLTR 418 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLR------ILERLGFSVIGEYDK--FEVSVP 447 N+ + ++ + ++KR G D E L+ IL LG V ++ + V+VP Sbjct: 419 NVELRLDRVDRVLGQLKR--GEDTLYEKYLQPDEIKGILTALGCGVAPSIEERVWTVTVP 476 Query: 448 SWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 +R +D+E + DL+EEI R+YG D+ + LP L L+ + R ++ + Sbjct: 477 VYRYRDLEREIDLIEEIARLYGYDRF-CDTLPSKTAAG--FLPLEYAAIRNIRAAFRAAG 533 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + E++++S + E G+ ++ + NP+ + S +RT +L GL+ A N+++ Sbjct: 534 LTELMHYSLVKTE-------GENQVVLANPLLVEYSALRTEMLSGLIDAFEYNLEQGNGP 586 Query: 567 FAIFEVSHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 FE+ ++ D E Q+ AGI G ++G W +R + F+AK Sbjct: 587 LNGFEIGRIFWKDGEEMQEGDRVAGI-IGGDPVQGK---WQQSGRDRA--LTWFEAKGIL 640 Query: 626 LSVIEPFVSLDSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 SV E ++ +ES + S HPGR+ + + LG FG+ HP + GL + Sbjct: 641 ESVFESLGL--AVEYESDRSDSRLHPGRTAALSLNGS-RLGIFGQLHPQLQQERGLPEAV 697 Query: 685 CGFEVYLDSIPIS-QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDR 742 F+ L + + + T+K SS RDLA + + ++K Sbjct: 698 YAFQFDLKVLLAALNEADNLTRKFSVYSSYPAADRDLALFAPIDVSVVEIEGVMKKAAGS 757 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L++ V +FD ++G+++ +G++S+A +++ + T D DI + ++ +VK+ L Sbjct: 758 LLESVQLFDEYRGENVPDGQRSLAFRLIYRVSDRTLSDGDIEPVQQKVRNALVKQFAVSL 817 Query: 803 RS 804 RS Sbjct: 818 RS 819 >gi|255324643|ref|ZP_05365760.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium tuberculostearicum SK141] gi|255298549|gb|EET77849.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium tuberculostearicum SK141] Length = 837 Score = 317 bits (811), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 244/841 (29%), Positives = 393/841 (46%), Gaps = 74/841 (8%) Query: 15 DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTG 68 +VS + +G E E E+ P I +V+ +E + P C + Sbjct: 20 NVSAADMDSGFVRVGFETEGYAAVPESTGPLVIGQVVEIEELTQFKKPIRYCQVNVGQAN 79 Query: 69 KHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS 127 E+Q ++CGA N R+ V A PGS +P + R+ S GM+CS EL L Sbjct: 80 GTGELQGIICGARNFRLNDYVVVALPGSELP-GGFKIAARETYDHISNGMLCSGAELGLG 138 Query: 128 DDSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA---G 182 + I+ L D VG + L D DV++TP+R + RG++ ++ +A Sbjct: 139 AQANGIIVLGDDVADKVGEDARPIIGLHDTNFDVNITPDRGYALSARGLSREIASAFDLD 198 Query: 183 LGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 + E + + ++P I L+ + + F + V G+ P W+ + Sbjct: 199 FADIAEDPSVAGIDTSAVPAAQGSLIDVTLNPETKAQRFGLRKVSGIDPQARTPFWLERE 258 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L G RS++ DITNYV L G P H F+A+ I L VR A GEK LD+ + +L Sbjct: 259 LMLCGQRSVNLPTDITNYVMLLLGAPMHAFEANVIQGNLVVRNADEGEKFETLDHVKREL 318 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 S ++VVI D IQS+AG++GG + + TTDV+ E A+WDPI +AR+ + + ++S Sbjct: 319 SAEDVVICDDNGIQSLAGVMGGTTSEISEETTDVVFESAIWDPITVARTSRRHKLSSESS 378 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERGVD + L +L+ L GGT + K I ++ +G+ Sbjct: 379 RRFERGVDPAIVEVALDTACALLQQLAGGTIEEGRTLIGGVAKREPIALRTAKASEYAGV 438 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D E + LE +G +V E D +V+ +WR D+ DL+EE+LR+ G++ I P Sbjct: 439 DYSRETVISRLEEVGCTVADEGDMLQVTPATWRTDISMDVDLIEEVLRLEGLEDI---PT 495 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELE 532 L R L+ Q R R + LA EV+ F++ + ++G +R +E Sbjct: 496 VLPTPAGGRGLTPAQKRRRAIGHGLAYAGYAEVLPAPFVANDTFDVWGLDKDDARRRTVE 555 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-------------- 578 + NP+ AD + + T+LLP +L+A GRNV R +D A++ + V Sbjct: 556 VQNPLEADKAILSTTLLPNMLEAIGRNVARGRSDLALYGLQQVAFKRAEASPMPSVEQRP 615 Query: 579 ---------DTPEGQKYMAAGIRKGS---SGIEGSGRLWSDKSE-ERCRFVDLFDAKADA 625 DT Q A + G+ G G GR +S E R V A+A Sbjct: 616 SEQVVSELLDTLPEQPLHVATVATGNIEHEGPWGEGRAYSYADAIESARQV----ARAAG 671 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLSNPI 684 + + E+ +HPGR +K + ++VLG+ GE HP +L+ L Sbjct: 672 VDI----------ELEAAHVLPWHPGRCAAVKVAGTDVVLGHAGELHPQVLEALNLPART 721 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRL 743 C E+ + ++P+ +K LSS + +D+A +VD+ +PA + + + L Sbjct: 722 CAMELDVTAMPLEEKFPAPV-----LSSFPALHQDIALVVDEDVPAERVRATVEEGAGEL 776 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I+ V +FD+F+G+ LGEGKKS+A Q+L + T D+++ E ++ A +R Sbjct: 777 IESVELFDIFRGEQLGEGKKSLAFQLLFRAADRTLTDEEVNEHRTAAAELAKQRLGAEMR 836 Query: 804 S 804 + Sbjct: 837 A 837 >gi|220912260|ref|YP_002487569.1| phenylalanyl-tRNA synthetase subunit beta [Arthrobacter chlorophenolicus A6] gi|219859138|gb|ACL39480.1| phenylalanyl-tRNA synthetase, beta subunit [Arthrobacter chlorophenolicus A6] Length = 847 Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 248/840 (29%), Positives = 394/840 (46%), Gaps = 102/840 (12%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDN-REAL-SPFTIVKVLSVERNP 56 M+ LSWL++ + + E + + L +G E E V +AL P + +VLS+ + P Sbjct: 1 MRIPLSWLREFAEVPAGATAEDVMEELVKVGFEEEDVHRPTDALQGPVVVGQVLSLVKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G Q + ++CGA N G V PG+ +P Sbjct: 61 QTNGKTINWCQVRVVPEGAEQTLTGEGIDPSGVQGIICGAHNFVEGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + +D I+ L +D +G + L L D Sbjct: 120 GDFRISARKTYGHLSAGMIASVRELGIGEDHDGILVLSRIGLDPEIGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-----DDS 211 ++++TP+R +RG A + A + P S S P + DD+ Sbjct: 180 AEINVTPDRGYAFSIRGAAREYAHA-----TGTTFTDPASKVSAPAALSGGYGVKLNDDA 234 Query: 212 SL-----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 + C F V+GV + P WM RL+ G+RSIS VDI+NYV L+ G P+H Sbjct: 235 PIYGKPGCDRFVARTVRGVDPSRPTPPWMASRLRLAGIRSISLPVDISNYVMLELGQPTH 294 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 +D ++S + VRRA +GEKI LD++ L P++++I D IAG++GG Sbjct: 295 CYDLDKLSGDIVVRRATAGEKITTLDDKVRTLDPEDLLITDDSGAIGIAGVMGGAATEVG 354 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D T+++LVE A +D ++I+RS + + +++ RFERGVD + +V L++ L G Sbjct: 355 DTTSNILVEAAHFDEVSISRSRRRHKLPSEASKRFERGVDWHVAGIAAQRVVDLLVELAG 414 Query: 386 GTASDICIARNITYKPRKIVF---MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF 442 GTA D ++ P + R+ GID E + LE LG +V + Sbjct: 415 GTAEDAGT--DVGTAPETVTIDLPAGFAAARI-GIDFTGEQIVTALEDLGAAVEKRDGGW 471 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS-LQQSRTRYVKRV 501 V+ PSWR D+E K DL EEI R+ G D+I P L R L+ LQQ R R ++ Sbjct: 472 TVTAPSWRHDLETKEDLSEEIARLVGYDKI---PATLPVAPPGRGLTRLQQQRRRLIQ-A 527 Query: 502 LASRAMMEVVNWSFISKEQSVLFG----GGQR-ELEILNPISADMSNMRTSLLPGLLKAT 556 LA + EV+++ F+SK + FG G R L++ NPIS + +RTS+LPGL++ Sbjct: 528 LADAGLTEVLSYPFVSKAANDTFGVAEQGAARPALKLANPISEEQGFLRTSVLPGLIEVA 587 Query: 557 GRNVDRAIADFAIFEVSHVY--------ENDTPEG-----------------QKYMAAGI 591 RN R D AIFE V+ E+ P G Q + A + Sbjct: 588 KRNHSRGFRDLAIFESGQVFLPGETAGTESIPPLGAKPADEVLDALYDGVPDQPFHVAAV 647 Query: 592 RKGS---SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G + + RLW + +D+ D L V L G+ + Sbjct: 648 LTGHDSPAAAAHAPRLW-----DWADALDIARLAGDVLGV--------DLVASQGSHQAF 694 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPGR+ + +GY GE HP +L + E+ D++ + + Sbjct: 695 HPGRAARLSLRTGETVGYAGELHPKLLAASDMPARSVALEINADALFEAAPDVIVAR--- 751 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 H+S+ +D+A +V +PA +++ ++ +L++DV +FDV+ GK + +GKKS+A Sbjct: 752 HISTFPVATQDVALVVPAEVPADDVLDALREGAGKLLEDVALFDVYAGKGIEDGKKSLAF 811 >gi|119509505|ref|ZP_01628653.1| phenylalanyl-tRNA synthetase beta subunit [Nodularia spumigena CCY9414] gi|119465911|gb|EAW46800.1| phenylalanyl-tRNA synthetase beta subunit [Nodularia spumigena CCY9414] Length = 819 Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 242/842 (28%), Positives = 438/842 (52%), Gaps = 61/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ +S E++ +TLT G EVE +++R + +V KVL + +P+ D Sbjct: 1 MRISLNWLRELVEIKLSPEELAETLTMAGFEVEDIEDRNTWANGVVVGKVLERQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNV+ + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDIGASEPLNIVCGAPNVKADIYVPVATTGTYLPNIDLKIKPAKLRGVPSQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L D I P + P+G + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPTDVDGIHIFPQENLPLGSDVRPLLGLDDVILDVTATANRADALCMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESI--PLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A GKL +I P ++ + + ++D C + ++ V+ +P+W++ Sbjct: 181 VAALTGGKL---SIPTPGATSVLKGAAHLGLKIEDQQACPAYIGTVIEQVKIAPSPDWLQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKIL 288 QRL+A G+R I+ +VDITNY+ + G P H FD R+ V + VR A SGE + Sbjct: 238 QRLRAAGVRPINNVVDITNYILWEWGQPLHAFDKDRLESVAGGEDLKIGVRFAGSGESLK 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD Q +LS N++I ++ + ++AG++GG+ T +++E AL+D + I RS + Sbjct: 298 TLDGQTRNLSTQNLLITANNKPVALAGVMGGEETEVHSGTQSLVLEAALFDSVAIRRSSR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIAR-NITYKPRKIV 405 ++G+ +++ R+ERGV+ + +SL+ L G +I R + + R I Sbjct: 358 SVGLRSEASGRYERGVNRAELEIACNRALSLLSELANGVIVQQEIADTRPDSSTWSRSIA 417 Query: 406 FMNSEVKRLSG-IDVPIEDS--------LRILERLG--FSVIGEYDKFEVSVPSWR-QDV 453 V + G +D+ ED+ RIL LG + GE + V+VP +R +D+ Sbjct: 418 LRLDRVNEVLGPVDLGEEDTGEVTEADVERILSALGCQLTAAGE-GTWTVTVPPYRYRDL 476 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 E + DL+EE+ R+YG D + LP + + LSL+Q R V+ L + + EV+++ Sbjct: 477 EREIDLIEELARLYGYDNF-CDTLP--EKSEAGYLSLEQELIRKVRAFLRAEGLTEVIHY 533 Query: 514 SFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 S + G R++ + NP+ + S +RT L+ GL+ A N+++ F++ Sbjct: 534 SLVKP-------GNDRQVVLSNPLFVEYSALRTDLISGLIDAFQYNLEQGNGSLNGFDLG 586 Query: 574 HVYENDTPEGQKYMA-AGIRKGSSGIEGSGR---LWSDKSEERCRFVDLFDAKADALSVI 629 ++ + Q+ A AGI G S R WS S E + FDAK SV Sbjct: 587 RIFWQEEDGLQETDAIAGIMGGVSVAHRRYRSIGKWSKGSSENP--MTWFDAKGILESV- 643 Query: 630 EPFVSLD-SLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 F +L+ ++ ++ HPGR+ + + LG FG+ HP + GL + I F Sbjct: 644 --FAALNLTVEYQPDCRDERLHPGRTASLWVGGD-RLGIFGQVHPQLRQDKGLPDSIYVF 700 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDR---- 742 ++ L+ + + + H S +P RD+AF + ++ +I K++++ Sbjct: 701 QLDLNVLLDALDQDEVMVPKFHAYSTYPASDRDIAFFAPVKV---SVADIEKSINKAAKG 757 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L++ V +FD ++G+++ G++S+A +++ + T + ++ + +++ E +V+K L Sbjct: 758 LLESVELFDEYRGENVPAGQRSLAFRLIYRSSDRTLTEAEVEPVHNKVREALVEKFGVNL 817 Query: 803 RS 804 RS Sbjct: 818 RS 819 >gi|297208224|ref|ZP_06924654.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC 51811] gi|296886963|gb|EFH25866.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 800 Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 238/819 (29%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPDTTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMSVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|56750269|ref|YP_170970.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus elongatus PCC 6301] gi|66773851|sp|Q5N5G8|SYFB_SYNP6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56685228|dbj|BAD78450.1| phenylalanyl-tRNA synthetase [Synechococcus elongatus PCC 6301] Length = 811 Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 234/838 (27%), Positives = 427/838 (50%), Gaps = 61/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ + D+ E + + LT G EVE++++R + +V +VL E++P+ D Sbjct: 1 MRISLNWLRELVQVDLEPEVLAEKLTLAGFEVEEIEDRRTWAAGVVVGRVLEREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G+ + + +VCGA NVR + A GS +P ++ + K+RG+ S GM+ Sbjct: 61 RLSVCQVEIGQAEPVTIVCGASNVRADIWVAVATLGSYLPCIDLKLKPTKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL L+ +S I P DA G + L L D ++D++ T NR+D + + GIA Sbjct: 121 CSLSELGLTKESEGIHIFPEDAGLQAGQPVGPLLGLDDVVLDLTSTANRADALSLIGIAR 180 Query: 177 D---LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + L AA L L E+ + LS ++ + + S G ++GV +P W Sbjct: 181 EVRALTAATL-TLPEVG-TADLSRTTLSWRSLYKVKPGSHYSG---TIIEGVTIAPSPEW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEK 286 +++RL+ G+R+I+ +VDITNY+ L+ G P H FD ++ + + VR A +GE Sbjct: 236 LQKRLQLAGIRTINNVVDITNYILLEYGQPLHAFDRQKLQAIAGSSDLAIGVRSAQAGET 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+QE L+ +VI + ++AG++GG + TT +L+E A ++PI + RS Sbjct: 296 LKTLDDQERTLAEAALVITAGDCPVALAGVMGGADSEVSQETTQLLLEAAWFEPIAVRRS 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ G+ T++ R+ERGV++ + + + L+L + GGT +A +P + Sbjct: 356 ARSQGLRTEASARYERGVNVTELPIATQRAIDLLLQIAGGTVISQTVATTTQTEPEHSIT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLG-------FSVIGEY------DKFEVSVPSWR-QD 452 + ++R++ + P++ L+ LG + IG + ++V VP +R +D Sbjct: 416 LR--LQRINELLGPVQAEDEELKDLGADDIERLLTAIGCHLTLVDDAVWQVRVPPYRYRD 473 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E + DL+EE+ R+YG D PL D+ LS+ +S R ++ V + E+ + Sbjct: 474 LEREIDLIEEVARLYGYDNFGETLPPLGS--DEGALSIDESLRRQIRAVCRGVGLTELQH 531 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + G R++ + NP+ A+ S +R LL GL+ A N ++ FE+ Sbjct: 532 YSLVKP-------GSDRQVHLANPLLAEYSALRLDLLSGLIDAFQYNWEQGNGPLWGFEI 584 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 ++ E + A G G + S W +E+ +D + AK + E F Sbjct: 585 GRIFWR---EEDGFFEADRMGGILGGDPSRGRWQRGGKEQA--IDWYAAKGVLEEIFERF 639 Query: 633 VSLDSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE--- 688 ++ F+ +HPGR+ + + LG FG+ HP++ + GL + FE Sbjct: 640 GL--TIEFQPDRQDDRFHPGRTASLWLQGD-RLGRFGQLHPSLCEGRGLPAEVYAFELDL 696 Query: 689 -VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 V+LD + Q +R + + SS RDLAF VDQ + L II+ L+ + Sbjct: 697 DVWLDH--LDQPER-QVPRFQPYSSFPASDRDLAFFVDQSVTVAELERIIRRQGGALLSE 753 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V +FD + G+ + E ++S+A ++ + T + ++ + D++ +++V++ LRS Sbjct: 754 VELFDQYCGEHVPENQRSLAFRLTYRASDRTLTEAEVEPVHDQVRQSLVERFRVTLRS 811 >gi|116630019|ref|YP_815191.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus gasseri ATCC 33323] gi|238853794|ref|ZP_04644160.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] gi|282851366|ref|ZP_06260731.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] gi|116095601|gb|ABJ60753.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus gasseri ATCC 33323] gi|238833603|gb|EEQ25874.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 202-4] gi|282557334|gb|EFB62931.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus gasseri 224-1] Length = 804 Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 243/812 (29%), Positives = 408/812 (50%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D + + + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLDLDEDPKDLGEKITRTGVEIASVDHPAEGLKKLVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVDVGEDEPIQIVCGAPNVAAGEDVIVALHGARIAGNEKI-KRGKIRGIKSNGMIC 119 Query: 120 SEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P D+ V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFADKNVPQKYVDGIFVFPKDSDVKPGEEVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 G A + V A + K +I P+ ++ E +LD D L F + V V+ Sbjct: 180 EGAAYE-VGAIVDKKPKIE---PVVLKADGPEWTNELDAKVDEKLAPKFYLRKVSNVKIG 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P WM++RL GLR I+ +VD+TNYV L G P H +DA D L VR+A GEK+ Sbjct: 236 ESPLWMQRRLWNAGLRPINNVVDVTNYVMLLTGQPMHAYDARTFKDGKLEVRKANKGEKL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+++E +L P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 296 TLLNDKEVELDPNDIIITDGQKPVMMAGVMGGKNSEVEDDTTDVILESAIFDGTSVRKSA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVF 406 T++ RFE+GV+ L L+ + GT ++ I A ++ P + Sbjct: 356 LRHANRTEASSRFEKGVNWDNTQKALDIAALLLRNDANGTVNEGEIKATDVQRNPSVVKT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + ++ G ++ + +I +RLGF+V G D+ V+VP+ R D+ ADLVEE+ RI Sbjct: 416 TVSYINKVLGTELSRSEMEKIFDRLGFTVDGSEDELVVTVPNRRWDISIPADLVEEVGRI 475 Query: 467 YGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D +KS +PL E S +++ R +K ++ + MME +++S S E+++ F Sbjct: 476 YGYDNLKSTQPL---LAETHGGYSEKETAMRRIKDIVQGQGMMEAISYSLTSPEKAISFT 532 Query: 526 GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPE 582 + +E+ P+++ S MR +LL GL+ A N+ R + A+FE VY EN+T Sbjct: 533 KDPKPVVEVQWPLNSSRSTMRENLLTGLVDAASYNMARKQKELALFEQGRVYDHENNTFN 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFE 641 +++AA SG S + + +D + K ++ D+ + + Sbjct: 593 EHEHLAALY---------SGHTVSANWQHLDQKIDFYFVKGQLTNLFRAIGIKDADVEYR 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQK 699 + HP R+ I + V G G + LD + I G+E+ LD+I Sbjct: 644 AEVIVGMHPTRTAGIYIKDQYV-GLIGMLAHTVTTLDKALRGSEIYGYEIDLDTIVSMLN 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 K K K + ++RDL+ +V + + IK N + + D+ V DV+ G + Sbjct: 703 KGMKAKAAPKFPA---IERDLSLLVPNAVTNAQIEAQIKLNGGKYLHDIQVIDVYAGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 G KS++ + KDT D+ + M++I Sbjct: 760 ESGHKSISYSLTFLNEKDTLTDEVVTKAMEKI 791 >gi|299822566|ref|ZP_07054452.1| phenylalanyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] gi|299816095|gb|EFI83333.1| phenylalanyl-tRNA synthetase beta subunit [Listeria grayi DSM 20601] Length = 801 Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 242/824 (29%), Positives = 418/824 (50%), Gaps = 55/824 (6%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + +W+K++ + ++S ++ + +T G+E+E V+ A+ + +V+S E++PD Sbjct: 1 MLVSYNWVKEYFPNLELSAAELGEAITRTGIEIEGVEELGSAIKNIVVGEVISCEKHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C ++D G+ + +Q++CGAPNV G V A G+ +P + + K+RG S Sbjct: 61 EKLNKC---QVDVGE-ETVQIICGAPNVAAGQKVVVARVGARLP-GGVKIKRAKLRGEVS 115 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP A VG L L D I+D+++TPNR+D Sbjct: 116 EGMICSLTELGFESKVVPKAYADGIFVLPEMATVGENAVLLLGLDDAILDMAITPNRADA 175 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A K + + + I + D + M V+ ++ Sbjct: 176 LSMNGVANEVAAIVNEKPQLAEQPDIRETGDVADYISVSIQDRETTDYYGMKIVRNIQIK 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R ++ +VD+TNY++L G P H FD R+ S + VR A GEKI Sbjct: 236 ESPMWLQTKLMKAGIRPLNNVVDVTNYINLLYGQPLHAFDYDRLGSKEIVVRLATKGEKI 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD +E +L+ + VI + +IAGI+GG + D TT + +E A++ I ++ Sbjct: 296 QTLDGEERNLAESHTVITNGSEALAIAGIMGGASSEVTDGTTTIALEGAIFASSFIGKAS 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 + LG+ T++ RF++G D + L H SLI L G S N + Sbjct: 356 RELGLRTEASIRFDKGSDAWKVEEALAHGASLIAELGDGEMISGYAEVDNRKAYENIVTT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S + L GI + + I ERL F IGE ++ V VPS R D+E +AD++EE+ R Sbjct: 416 SISRINALLGIQISKTELTTIFERLQFEASIGE-EEVAVYVPSRRWDIELEADILEEVAR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D I P L +LS++Q R V+R L S + + + +S IS++ F Sbjct: 475 IYGYDNI---PTTLPSTATAGSLSIEQQNRRLVRRYLESAGLNQALTYSLISEKDVNRFA 531 Query: 526 GGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEND---T 580 + ++I P+S + S +RTS++PGLL+A NV R + A++E V Y+N+ Sbjct: 532 LKEAAAVKIAMPMSEEHSELRTSIIPGLLQAASYNVARKNKNVALYETGAVFYKNEGDNL 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P+ +++A I +G + +++ + VD F K ++ ++++F Sbjct: 592 PDEIEHVAGLI---------TGEWQVNDWQKQVKSVDFFVLKGIVEGLLAKLNVKETIQF 642 Query: 641 ESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ES + HPGR+ I+ EI G+ G+ HP+ + L + FE+ L + + K Sbjct: 643 ESIQKAEMHPGRTARILLGDKEI--GFIGQVHPHTSSTYDLKDTYV-FELRLADLLAAPK 699 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 V S +P + RD+A +V++ + + +I +N + + +V +FD+F G+S Sbjct: 700 NAV----VYQTISRYPEMSRDIAILVEEEVTNQQIETLIYENGGKQLANVEIFDIFAGES 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +G GKKS+A + TF D + ++ + + + V K TNA+ Sbjct: 756 VGAGKKSMAYSL-------TFSDKERTLVEEEVTKAVEKVTNAL 792 >gi|320451541|ref|YP_004203637.1| phenylalanyl-tRNA synthetase subunit beta [Thermus scotoductus SA-01] gi|320151710|gb|ADW23088.1| phenylalanyl-tRNA synthetase, subunit beta [Thermus scotoductus SA-01] Length = 782 Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 402/824 (48%), Gaps = 87/824 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ SWLK ++ S E + + L S+G E ++++ R P +V +E +P Sbjct: 1 MRVPFSWLKSYVPELESPEVLEERLASLGFETDRME-RVFQIPGGVVFARVLEAHPISST 59 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 ++ R+ + ++VV GA N R G+ A PG+ + N + + R I+G+ S GM S Sbjct: 60 SLKRLVLDAGKVVEVVSGAGNARAGIGVALALPGTEV--NGLRIGERTIQGVVSHGMALS 117 Query: 121 EKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 KEL + + ++E P D P G L++ + ++D+ +TPNR D +G+ G+A DL Sbjct: 118 PKELGVGEYGGGLLEFPPDTLPPGTPLAEAWP-EEEVLDIEVTPNRPDALGILGLAFDLH 176 Query: 180 AAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A G L E+ L +E +PL ++D F + G++ +P W+++ L Sbjct: 177 ALGYSLILPEVR----LGTEKVPLPFGLRVEDPRGALHFTLSYAFGLQVGPSPLWLQRIL 232 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A G+R IS +VD+TNYV L+R P H FD + + + VRRA GEK++ LD E +L Sbjct: 233 FACGMRPISNVVDVTNYVMLERAQPMHAFDLRFVGEGILVRRAKPGEKLVTLDGVERELH 292 Query: 299 PDNVVIASDGRIQS----IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +++VIA +S +AG++GG + ++T + +EVA +DP++I ++ + G+ T Sbjct: 293 LEDLVIAGYRGEESFPIGLAGVMGGAESEVREDTRAIALEVAQFDPVSIRKTARRHGLRT 352 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++ YRFERGVD G +P + +SL+ +L G ++ + R I F + +L Sbjct: 353 EASYRFERGVDPLGQVPAAQRALSLLQTLAGARVAETILEEGTPQAQRPIPFRPAYANQL 412 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G P E L IL RLG V GE + V+ PS R D+E + DLVEEI RI G + I Sbjct: 413 LGTQYPEEVQLAILRRLGCRVEGE-GPYRVTPPSRRLDLELEEDLVEEIARIQGYESIPL 471 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 + D R + R R ++ +L+ EV +SF+ E++ LF + Sbjct: 472 DLPAFFPAPDNRGVERPYQRERRLRELLSGLGFQEVYTYSFMDPEEASLFRLPPPPWRLK 531 Query: 535 NPISADMSNMRTSLLPGLLKATGRNV-----DRAIADFAIFEVSHVYEND---------- 579 NP+S + + +RT L PGLL+ N+ +RA+ +FEV V+ + Sbjct: 532 NPLSPEKAALRTHLFPGLLRLLKENLALDRPERAL----LFEVGRVFGKEGAWVREETHL 587 Query: 580 ----------TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 P G+K + KG L +A + L + Sbjct: 588 AGLLFGEGLGLPHGEKLSGYPLLKG-----------------------LLEAFLNRLGL- 623 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 L E+ + HPG SG ++ + E G+ G+ HP IL L P+ FE+ Sbjct: 624 -------DLGVEAHPYPFLHPGVSGKVRVAGE-EKGFLGQVHPEILKALELP-PVYIFEL 674 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKN-VDRLIDDV 747 +L P+ +K S +P+ RDLA +V + P G + +++ ++ + Sbjct: 675 HL---PLPEKPFRFQD-----PSRYPLALRDLAVVVPEATPYGEVEALLRQAAGPYLESL 726 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +FD++QG L G+KS+A + + + T +D+++ M R++ Sbjct: 727 RLFDLYQGPPLRVGEKSLAFHLRFRHPERTLKDEEVEEAMARLL 770 >gi|258454915|ref|ZP_05702878.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A5937] gi|257862795|gb|EEV85560.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A5937] Length = 800 Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 238/819 (29%), Positives = 410/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSDLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLETEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|312139877|ref|YP_004007213.1| phenylalanine-tRNA ligase beta chain phet [Rhodococcus equi 103S] gi|311889216|emb|CBH48530.1| phenylalanine-tRNA ligase beta chain PheT [Rhodococcus equi 103S] Length = 829 Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 259/837 (30%), Positives = 419/837 (50%), Gaps = 85/837 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL D L + VS E++ +GLEVE+V+ E ++ P + +VL +E Sbjct: 1 MRVAQSWLTDILQRTTPEWQVSPEELDAGFVRVGLEVEEVETLEPVTGPLVVGRVLEIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++D G + ++VCGA N G L + A PG+ +P I + RK G Sbjct: 61 LTEFKKPIRFCKVDVGADEPQEIVCGARNFAQGDLVIAALPGAVLPGGFAIAS-RKTYGK 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GMMCS EL + D + I+ L P A G + L L D +I++++TP+R C V Sbjct: 120 VSNGMMCSASELGIGKDHSGILVLEPGTAEPGTDANVLLGLDDTVIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L + + PL S E+ P+ L+ S F + G+ Sbjct: 180 RGLTRELACGFDLEFADPAAIAPLPSDGGEAWPI----TLEPESGATRFTARRITGIDPK 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA+++ L VRRA +GEK+ Sbjct: 236 AVSPWWLQRRLLMSGVRPISPAVDVTNYVLLELGQPLHAFDAAKVQGGLVVRRAQAGEKL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L ++VVIA D S+AG++GG D TTD+L+E A WDP+ + ++ Sbjct: 296 TTLDGIERALDAEDVVIADDSGAVSLAGVMGGASTEVHDGTTDILLESATWDPLAVFKTS 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +I+++ R+ER VD + +P L +L++ + GGT + P + M Sbjct: 356 RRHKLISEASKRYERVVDPEVALPALDRAAALLVEIAGGTVEPVLTDIG-GVTPAGQIRM 414 Query: 408 NSEVK-RLSGIDVPIEDSLRILERLGFSV---IGE--YDKFEVSVPSWRQDVEEKADLVE 461 + ++ R++G+ P + R L ++G +V + E + + V+ PSWR D+ + +DLVE Sbjct: 415 DIDLPDRVAGVAYPNGTAARRLTQIGCTVEVGVSETGHGQLVVTPPSWRPDLTQPSDLVE 474 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G++QI S L R L+ QQ R R V R+LA+ +EV+ F+ Sbjct: 475 EVLRLEGLEQIPSV---LPHAPAGRGLTPQQRRRRAVGRMLAASGCVEVLPPVFLPHAVF 531 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 +G + ++LNP+ +D + ++LLPG+L+ RNV R D A++ V+ V Sbjct: 532 DTWGLDADDPRRNTTKVLNPLESDRPELASTLLPGMLEVLARNVARGQRDVALYGVAQVV 591 Query: 577 ENDTPEGQKYMA------------------------------AGIRKGSSGIEGSGRLWS 606 + PE + A AG+R+ SG G GR Sbjct: 592 QPG-PETRPVEALPVDRRPTDEQIAELMGSLPAQPLHVAVVLAGLRE-PSGPWGPGR--- 646 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 + E L ADA V V L + ++ +HPGR + +V G+ Sbjct: 647 --AVEAADAFALVRTIADACGVA---VELRAAQYLP-----WHPGRCAEVVFDGTVV-GH 695 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 GE HP +L+ GL C E+ LD++P+ T+ +S V +D+A +VD Sbjct: 696 AGELHPAVLERAGLPARTCAVEIDLDALPV-----TEVLPAPRISPFPAVLQDVAVVVDA 750 Query: 727 HIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 +PA + +++ L++D+ +FDVF+G+ +GEG+KS+A + + T +D+ Sbjct: 751 SVPAAAVEAALRSGGGELLEDIRLFDVFEGEQVGEGRKSLAFALRFRGADRTLTEDE 807 >gi|15924129|ref|NP_371663.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus Mu50] gi|15926723|ref|NP_374256.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus N315] gi|148267631|ref|YP_001246574.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus JH9] gi|150393686|ref|YP_001316361.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus JH1] gi|156979461|ref|YP_001441720.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus Mu3] gi|253317078|ref|ZP_04840291.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255005925|ref|ZP_05144526.2| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257795131|ref|ZP_05644110.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9781] gi|258407161|ref|ZP_05680310.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A9763] gi|258421748|ref|ZP_05684669.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9719] gi|258432908|ref|ZP_05688597.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A9299] gi|258443398|ref|ZP_05691741.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A8115] gi|258449816|ref|ZP_05697914.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A6224] gi|269202751|ref|YP_003282020.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus ED98] gi|282894166|ref|ZP_06302397.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A8117] gi|282928661|ref|ZP_06336258.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A10102] gi|295405943|ref|ZP_06815752.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A8819] gi|296275626|ref|ZP_06858133.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus MR1] gi|297246503|ref|ZP_06930341.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A8796] gi|54039665|sp|P67041|SYFB_STAAN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|54042280|sp|P67040|SYFB_STAAM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|13700939|dbj|BAB42235.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus N315] gi|14246909|dbj|BAB57301.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus Mu50] gi|147740700|gb|ABQ48998.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus JH9] gi|149946138|gb|ABR52074.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus JH1] gi|156721596|dbj|BAF78013.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus Mu3] gi|257789103|gb|EEV27443.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9781] gi|257841316|gb|EEV65761.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A9763] gi|257842081|gb|EEV66509.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9719] gi|257849348|gb|EEV73325.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A9299] gi|257851488|gb|EEV75427.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A8115] gi|257856736|gb|EEV79639.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A6224] gi|262075041|gb|ACY11014.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus ED98] gi|282589700|gb|EFB94786.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A10102] gi|282763652|gb|EFC03781.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A8117] gi|285816819|gb|ADC37306.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus 04-02981] gi|294969378|gb|EFG45398.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A8819] gi|297176609|gb|EFH35872.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A8796] gi|312829532|emb|CBX34374.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315128536|gb|EFT84541.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus CGS03] gi|329725156|gb|EGG61645.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus aureus subsp. aureus 21172] Length = 800 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 238/819 (29%), Positives = 410/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSDLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|289547994|ref|YP_003472982.1| phenylalanyl-tRNA synthetase subunit beta [Thermocrinis albus DSM 14484] gi|289181611|gb|ADC88855.1| phenylalanyl-tRNA synthetase, beta subunit [Thermocrinis albus DSM 14484] Length = 759 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 240/809 (29%), Positives = 402/809 (49%), Gaps = 56/809 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP-DL 58 M S L +DT+ + E+I LT E + + + KVLS E +P D+ Sbjct: 1 MIVPFSLLSQLVDTEGLKPEEIAHRLTLCSAETSLLVWERDIEGVLVGKVLSCEPHPSDI 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++++ TG+ + +QV+ V+ G L + AP GS + V R I G+ S G++ Sbjct: 61 GLLLVKVYTGR-ETLQVITRDGGVKEGHLVLLAPAGSFVMGKR--VEKRTIGGVVSEGVL 117 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S ++L L D +++ D P+G D L + ++++ +TPNR D + VRG+A + Sbjct: 118 LSYQDLKLEDSEQGVIKWMDDTPLGTSGRDLLSFGEILLEIDVTPNRGDLLSVRGVARE- 176 Query: 179 VAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 VAA G+ LKE P E+ L+I+ D CK + ++ V+ +P W+++ Sbjct: 177 VAALFGRPMLKE---DTPTFEETGSLDIEVHDGD---CKRYRGVYIEKVKVGPSPLWLKK 230 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 L G++SI+ +VD+TNY+++ G P H FD ++ + VR A GE+++ L +QE Sbjct: 231 VLWQCGMKSINNVVDVTNYITIRDGQPLHAFDMDQVKGGIRVRSAEEGERLITLAHQEIT 290 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +++VIA R ++AG+IGG +G +T +L+E A +DP+ + RS K I T+S Sbjct: 291 LTKEDLVIADQERPLALAGVIGGLDSGVTHSTNKILLESAFFDPVRVRRSAKRHKIQTES 350 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD++G+ V LIL L GG + Y P+ I+ +++R +G Sbjct: 351 SYRFERGVDIEGVAFYQNSAVDLILRLAGGQLVAVKDIYPTPYTPKTIMVTIGKMERYTG 410 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSE 475 + + + LE LGF EV VPSWR D++E D++EEILR+ G DQ+ S Sbjct: 411 KRWDLRELQKRLEPLGFQTNLLRCGLEVKVPSWRSFDIKEDVDVLEEILRLEGYDQLPSH 470 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 PL L +S S LA EV+ +SF + L + L ++N Sbjct: 471 PLYLPA-----RVSFPSSEVERWADFLAHVGFREVITFSFEDDQLYHLLNLERPTLSLVN 525 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P++ S MR+SL+P LL+ N AIFE+ VY D G++ + Sbjct: 526 PLAKSQSYMRSSLVPSLLRTCLYNQRNYNQQVAIFELGKVYHKD---GEELRLGLLSTNL 582 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 +E + K ++E + L E A + HP + Sbjct: 583 HSVE--------------------EFKNIVYRLLEGY----HLETEFSAIPFLHPHLQVL 618 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 +K E++ G+ G HP + + + + E+ P S KKR + V S P Sbjct: 619 LKVEDEVI-GFMGRLHPALEEKLEIKGKVLLAEL---RPPSSGKKREELGTV---SPFPP 671 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKS-LGEGKKSVAIQVLIQPL 774 V RD++ ++D+ + L++ I+ ++ ++DV+VFDV+ +GEGKKSV+ +++++ Sbjct: 672 VVRDISLVMDKEVSVAKLISSIRRMEG-VEDVSVFDVYIDPVIIGEGKKSVSFRLILRSN 730 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + D++ L+DR+V + + LR Sbjct: 731 ERSMSDEEANALVDRVVRLLEETYGVRLR 759 >gi|258423818|ref|ZP_05686704.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9635] gi|257846050|gb|EEV70078.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9635] Length = 800 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVAEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A V+Q+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVNQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + K AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIKQGAVIR 800 >gi|258446071|ref|ZP_05694233.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A6300] gi|257855129|gb|EEV78070.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus A6300] Length = 800 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 238/819 (29%), Positives = 410/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSDLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVAIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|255526053|ref|ZP_05392976.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium carboxidivorans P7] gi|296187100|ref|ZP_06855498.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium carboxidivorans P7] gi|255510239|gb|EET86556.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium carboxidivorans P7] gi|296048294|gb|EFG87730.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium carboxidivorans P7] Length = 793 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 238/826 (28%), Positives = 409/826 (49%), Gaps = 56/826 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK + WLKD++D D+ +++ D LT G +VE ++ + + K++ + ++P+ D Sbjct: 1 MKVPVKWLKDYVDIDIPAKELGDRLTLSGSKVEGIETTGDEIQNVVTGKIVEIVKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D K + +Q+V A N++ + A GS + + + K+RG S GM Sbjct: 61 KLSICQVDINKEELLQIVTAATNMKEHDVVPVALHGSTL-HGGLKIKKGKLRGEVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP D +G + + L+++ +ID +T NR DC+ V GIA Sbjct: 120 CSEEELGIAGDKPVHGLMILPQDTLLGKDIKEVLDMTSSVIDFEITSNRPDCLSVVGIAR 179 Query: 177 DLVAAGLG----KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + AA LG K+ E+ + ++I E+K D+ D LC+ + VK ++ +P Sbjct: 180 E-TAATLGARKYKMPELKFEA-VCKDNIKDELKVDIKDK-LCRRYMARGVKNIKIQPSPG 236 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDITN+V L+ G P H FDA +I S + V RA GEK LD Sbjct: 237 WMQDRLLEAGVRPINNMVDITNFVMLELGQPMHAFDARQITSKNIVVERALDGEKFTTLD 296 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 ++E L + + I R +AGI+GG ++ D+TT ++ E A +D NI S L Sbjct: 297 DEERILDSNVLNIKDGDRTIGLAGIMGGLNSEVQDDTTSIIFESATFDGTNIRISANKLA 356 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE- 410 + T++ RFE+ +D L L+ L G + I R + ++S Sbjct: 357 LRTEASSRFEKDLDPNLAEIALDRACHLVQELEAGEVMEGTIDIYPEKLERHTLEVDSNW 416 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + G D+ ED L+RL + + D + VP++R D+ + D+ EE+ RIYG Sbjct: 417 INTFLGTDISKEDMKEYLDRLELNTEVKEDNLVIDVPTFRSDINIREDVAEEVARIYGYS 476 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF---G 525 + + + V + SL+Q + L + + +++SF+S + +L Sbjct: 477 NVPT--TIIKSVNARGGKSLKQKLDDKLVETLMCSGLNQSISYSFVSPKVFDKILLPEDS 534 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDT 580 ++ + + NP+ D S MRT+ +P +++A GRN R + IFE+ VY EN Sbjct: 535 DLRKVVSVRNPLGEDYSIMRTTTVPSMMEALGRNYSRNNSYVRIFEMGKVYIPNEDENKL 594 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 PE + + G L+ D D F K +++E +D F Sbjct: 595 PEERNILTLG-------------LYGD--------ADYFHVKGVVENILENL-GIDKFSF 632 Query: 641 --ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ES PS +HPG++ + ++V G GE HP++ + +G+ E+ +D I Sbjct: 633 KRESENPS-FHPGKTAALYIKKDLV-GILGEIHPDVAENYGVDERCYIAELNID---ILY 687 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKS 757 K KK + V RD+A ++D + + I+ K L++ + +FDV++G+ Sbjct: 688 KYANMDKKYKAIPKFPAVTRDMAILIDDSVLVQDIEEIMHKQGGHLLESIKLFDVYKGEQ 747 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKS+A ++ + T D+++ + D+IV + + A LR Sbjct: 748 IPEGKKSIAYSLIYREENKTLTDNEVNKVHDKIVRTLENRLGAQLR 793 >gi|298694426|gb|ADI97648.1| phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus ED133] Length = 800 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 239/822 (29%), Positives = 414/822 (50%), Gaps = 41/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L+D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLNDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVV----NQWQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD---SIPISQKKRT 702 HPGR+ I ++V G+ GE HP + L FE+ D ++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAAENDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 T + +S RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +G Sbjct: 706 PTPRFPGMS------RDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKG 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+AI++ ++T D+ + + I E + + AV+R Sbjct: 760 KKSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|227540446|ref|ZP_03970495.1| phenylalanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] gi|227239770|gb|EEI89785.1| phenylalanine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300] Length = 799 Score = 316 bits (809), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 240/821 (29%), Positives = 400/821 (48%), Gaps = 40/821 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERN 55 M + +WLK+ +D D + E+I LT IGLEVE ++ ++ L + +V + E++ Sbjct: 1 MNISYNWLKNFVDIKDKTPEQISHILTDIGLEVEVLETVQSIPGGLEGLVVGEVKTCEQH 60 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRG 111 P+ D + +D G+ + + +VCGAPNV G + A G+ + +N KIRG Sbjct: 61 PNADRLRVTTVDVGREELLHIVCGAPNVAAGQKVIVATVGTTVHPLEGEPFKINKSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI-IDVSLTPNRSDCIG 170 S GM+C+E E+ L I+ LP D P+G DY ++D ++ LTPNR+D Sbjct: 121 EVSEGMICAEDEIGLGKSHDGILVLPADTPLGQTARDYFHITDDYRYEIGLTPNRADAAS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A DL +I+ S ES ++ + ++ + + GV + Sbjct: 181 HLGVARDLAGFFRTSFTLPDITAFQSIES-AVQTTVSVRNTDAAPRYTGVNISGVTVKES 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P+W++++L +G+R I+ +VD+TNYV D G P H FDA +I+ + VR A GE Sbjct: 240 PDWLKEKLNVIGIRPINNIVDVTNYVLHDLGQPLHAFDADQIAGHQVIVRNATEGEAFTT 299 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD LS +++VIA + IAG+ GG H+G +T ++ +E A ++ +++ ++ K Sbjct: 300 LDGVARTLSAEDLVIADAEKPMCIAGVFGGLHSGVSASTVNIFLESAYFNSVSVRKTAKR 359 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 + TDS +RFERG D LK LIL + GGT +S I P + Sbjct: 360 HALKTDSSFRFERGTDPNMTAFALKRAALLILEVAGGTVSSAITDLYPDPVAPFEFTVNY 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 + V+RL G +P ED I+ LG +V E + + V VP ++ DV + D+VEE+LRIY Sbjct: 420 TNVQRLIGKAIPKEDIRSIITSLGIAVAKENEHELLVQVPPFKVDVTREVDIVEEVLRIY 479 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLF 524 G + I+ + Q+ N S + R + +V L + E+++ S E Sbjct: 480 GYNNIEIK----QQINASLNTSEKPDREVVLNQVADLLIANGYNEILSNSLTKSE---YV 532 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 +++LNP+S+D+ MR +L+ L A N R D FE Y + EG Sbjct: 533 DDVDTAVKLLNPLSSDLDTMRQNLVFSALTAVSYNQKRKSTDLKFFEFGRTY-HLLEEGY 591 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + G+ +GR +K + V ++ KA A+ I +++ L Sbjct: 592 Q------ERQHLGLALAGRQTGEKWSGEAKPVTFYNIKA-AVDTIIRRLNIQGLEVTDTD 644 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTK 703 +++ G S + L FG L + + + D I + +K K Sbjct: 645 STYFDYGLS---YKKGQKTLVAFGAVAQTSLKKADVDGQVFFADFDWDQILKVIRKNSIK 701 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGK 762 K+V S V+RDLA +VD+ + L + +K +L+ +V +FDV++G L +GK Sbjct: 702 YKEV---SKFPAVRRDLALLVDEAVTFDKLRQVAVKTERKLLTEVNIFDVYKGDKLPQGK 758 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS A+ ++Q + T D I ++ +++ N K+ AV+R Sbjct: 759 KSYALSFVLQDEEKTLADKQIDAIVQKLILNFEKELGAVVR 799 >gi|300361218|ref|ZP_07057395.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] gi|300353837|gb|EFJ69708.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] Length = 804 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 243/812 (29%), Positives = 408/812 (50%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D + + + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLDLDEDPKDLGEKITRTGVEIASVDHPAEGLKKLVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVDVGEDEPIQIVCGAPNVAAGEDVIVALHGARIAGNEKI-KRGKIRGIKSNGMIC 119 Query: 120 SEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P D+ V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFADKTVPQKYVDGIFVFPKDSDVKPGEEVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNN 228 G A + V A + K ++ P+ ++ E +LD D L F + V V+ Sbjct: 180 EGAAYE-VGAIVDKKPKVE---PVVLKADGPEWTNELDVKVDEKLAPKFYLRKVSNVKIG 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P WM++RL GLR I+ +VD+TNYV L G P H +DA D L VR+A GEK+ Sbjct: 236 ESPLWMQRRLWNAGLRPINNVVDVTNYVMLLTGQPLHAYDARTFKDGKLEVRKAKKGEKL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+++E DL P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 296 TLLNDKEVDLDPNDIIITDGQKAVMMAGVMGGKNSEVEDDTTDVILESAIFDGTSVRKSA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVF 406 T++ RFE+GV+ L L+ + GT ++ I A ++ P + Sbjct: 356 LRHANRTEASSRFEKGVNWDNTQKALDIAALLLRNDANGTVNEGEIKAADVQRNPSVVKT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + ++ G ++ + +I +RLGF+V G D+ V+VP+ R D+ ADLVEE+ RI Sbjct: 416 TVSYINKVLGTELSRSEMEKIFDRLGFTVDGSKDELIVTVPNRRWDISIPADLVEEVGRI 475 Query: 467 YGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D +KS +PL E S +++ R +K ++ + MME +++S S E+++ F Sbjct: 476 YGYDNLKSTQPL---LAETHGGYSEKETAMRRIKDIVQGQGMMEAISYSLTSPEKAISFT 532 Query: 526 GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPE 582 + +E+ P+++ S MR +LL GL+ A N+ R + A+FE VY EN+T Sbjct: 533 KDPKPVVEVQWPLNSSRSTMRENLLTGLVDAASYNMARKQKELALFEQGRVYDHENNTFN 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFE 641 +++AA SG S + + +D + K ++ D+ + + Sbjct: 593 EHEHLAALY---------SGHTVSANWQHLDQKIDFYFVKGQLTNLFRAIGIKDTDIEYR 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQK 699 HP R+ I + + V G G + LD + I G+E+ LD+I Sbjct: 644 PEIIVGMHPTRTAGIYLNDQYV-GLIGMIAHTVTTLDKALRGSEIYGYEIDLDTIVSMLH 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 K K K + ++RDL+ +V + + IK N + + D+ V DV+ G + Sbjct: 703 KGMKAKAAPKFPA---IERDLSLLVPNAVTNAQIEAQIKLNGGKYLHDIQVIDVYAGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 G KS++ + KDT D+ + M++I Sbjct: 760 EAGHKSISYSLTFLNEKDTLTDEVVTKAMEKI 791 >gi|257061049|ref|YP_003138937.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. PCC 8802] gi|256591215|gb|ACV02102.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanothece sp. PCC 8802] Length = 812 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 234/835 (28%), Positives = 420/835 (50%), Gaps = 54/835 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +++WL++ ++ + E + + LT G+EVE++++R + ++ K++ + +P+ D Sbjct: 1 MKISVNWLQELVNVTLPPETLAEILTVAGIEVEEIEDRRQWADGVLIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + +VCGA N R + A G+ +P+ ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDIGKETPLNIVCGASNARSDIFVAVATLGTYLPQIDLKIKPAKLRGVPSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I ++ +G +L L D I+D+S T NR+D + + G+A + Sbjct: 121 CSLAEVGLAKESAGIHIFDDNSLKLGADARPFLGLDDVILDISPTANRADALSMVGVARE 180 Query: 178 LVAAGLGKL---KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A GKL + ++S P E+ + ++D + C + ++ V+ +P W+ Sbjct: 181 VAALTGGKLSLPQPPDLSLP---ETSSYRLNVTVEDGNACPAYLGTVIENVKIAPSPEWL 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 ++RL+A G+R I+ +VD+TN V L+ G P H FD ++ + L +R A E + Sbjct: 238 QRRLQAAGVRPINNVVDVTNLVLLEWGQPLHAFDREKLQAIAKNQPLTLGIRFAKDTETL 297 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+QE L P N++I ++ ++AG++GG+ D+NT ++++E AL+D + I RS Sbjct: 298 KTLDDQERTLKPVNLLITANDHPVALAGVMGGQETEVDENTQNIVLEAALFDQVTIRRSS 357 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + ++S R+ERGV+ + + ++LI L GGTA IA N + + + Sbjct: 358 RAQSLRSESSARYERGVNQSALEIACRRAIALICELAGGTAVIQVIADNRPDLSTESIIL 417 Query: 408 NSEVKRLSGIDVPIE-----------DSLRILERLGFS---VIGEYDKFEVSVPSWR-QD 452 E R+ + PIE D RIL LG V G + VSVPS+R +D Sbjct: 418 RLE--RVHQVLGPIEKEGTITQIAATDVERILTDLGCHLTLVEGTNKVWRVSVPSYRYRD 475 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E + DL+EE+ R+YG D E L + LS + R V+ V + EVV Sbjct: 476 LEREIDLIEEVARLYGYDNFCDE---LPDKSEPGGLSFEYQVQRKVREVFRGVGLTEVVQ 532 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + E++ ++ + NP+ A+ + +RT+LL GL+ + N + FE+ Sbjct: 533 YSLVKPEKA--------DIVLANPLFAEYAALRTNLLDGLIDSFVYNQSQGNGALNAFEI 584 Query: 573 SHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 ++ + Q++ AGI G +G W+ + + ++AK SV Sbjct: 585 GRIFRIIDGKDQEWDEIAGIFGGDVFPQGR---WTRSG--KSVPMTWYEAKGILESVFG- 638 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L + HPGR+ + E LG FG+ HP + L + + F + Sbjct: 639 RLGLAVTYQADNSDERLHPGRTASLWVGKE-RLGIFGQLHPQLRQEKDLPDAVYVFALNF 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTV 749 D + S K ++ S +P V+RDLAF + L ++ K L+ +V + Sbjct: 698 DILLASLAKEDLITPILRPYSTYPAVERDLAFFAPLKVSVAELTQVMNKAGGNLLTEVEL 757 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD +QG+++ G++S+A + + T D D+ + D+I +VK+ LRS Sbjct: 758 FDQYQGENVPAGQRSLAFSLAYRASDRTLTDGDVEPVHDKIRNALVKQFEVTLRS 812 >gi|282916388|ref|ZP_06324150.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|283770199|ref|ZP_06343091.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus H19] gi|282319828|gb|EFB50176.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus D139] gi|283460346|gb|EFC07436.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus H19] Length = 800 Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSAKDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T++++VE A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVVEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVNEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G ++ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFNLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVV----NQWQGKKET----VDFYLAKGVVDRVAEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|126656357|ref|ZP_01727618.1| phenylalanyl-tRNA synthetase beta subunit [Cyanothece sp. CCY0110] gi|126622043|gb|EAZ92750.1| phenylalanyl-tRNA synthetase beta subunit [Cyanothece sp. CCY0110] Length = 813 Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 241/840 (28%), Positives = 430/840 (51%), Gaps = 63/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +++WL++ ++ ++ E + D LT GLEV+ +++R + ++ K++ + +P+ D Sbjct: 1 MKISVNWLRELVNVTLTPEALADLLTIAGLEVDDIEDRRQWADGVVIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ +VCGAPN + + A G+ +P+ ++ + K+RG++S GM+ Sbjct: 61 KLSVCQVDIGQETPSTIVCGAPNAKADIYVPVATLGTYLPKIDLKIKSAKLRGVKSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I + +G YL L + I+D++ T NR+D + + G+A + Sbjct: 121 CSLAEVGLTKESAGIHIFEENNLKLGADARPYLGLDEVILDITPTANRADAMSMIGVARE 180 Query: 178 LVAAGLGKLKEINISCP----LSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + A GKL N+ P LS E S PL +K + D + C + ++GV+ +P Sbjct: 181 VAALTGGKL---NLPQPPQTSLSGEQSYPLTVK--VSDGNACPTYIGTVIQGVKIADSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--------LTVRRACSG 284 W++QRL+A G+R I+ +VDITN V L+ G P H FD ++ V + VR A Sbjct: 236 WLQQRLEAAGVRPINNVVDITNLVLLEWGQPLHAFDLQKLETVAGNKDNLTVGVRFANDK 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + LD QE L+P N++I ++ ++AG++GG+ + T ++L+E AL++ + I Sbjct: 296 ETLKTLDGQERKLNPVNLLITANDTPVALAGVMGGEETEVAEETQNILLEAALFEQVTIR 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RK 403 RS ++ + +++ R+ERG++ + + ++LI L GGT R ++P R Sbjct: 356 RSSRSQSLRSEASARYERGINYSELELACRRAIALITELAGGTP---VTQRMSDHRPDRS 412 Query: 404 IVFMNSEVKRLSGIDVPI-----------EDSLRILERLGFS---VIGEYDKFEVSVPSW 449 + + R+ + P+ ED RIL L + V GE + V++PS+ Sbjct: 413 SESIKLRLDRIHHVLGPVEKDGQKTNIAAEDVERILGDLNCTLTPVAGENTVWSVTIPSY 472 Query: 450 R-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 R +D+E + DL+EE+ R+YG D+ E L + LS++ R V+ V + Sbjct: 473 RYRDLEREIDLIEEVARLYGYDRFCDE---LPDKTEAGGLSIEYQTQRKVREVFRGVGLT 529 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E+V +S + E++ ++ I NP+ A+ S +RT+LL GL+ A N + Sbjct: 530 ELVQYSLVKPEKA--------DIVISNPLFAEYSALRTNLLDGLIDAFAYNQSQGNGALN 581 Query: 569 IFEVSHVYEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 FE+ ++ D + AGI G +G W+ + + + ++AK S Sbjct: 582 GFEIGRIFRKIDGERAEWDNIAGIMGGDLLPQGR---WTRSG--KPKPMTWYEAKGILES 636 Query: 628 VIEPFVSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 V E S+ ++ + HPGR+ + + EI LG FG+ HP + L + + G Sbjct: 637 VFERLGV--SVEYQPDSEDERLHPGRTASLWLNGEI-LGIFGQIHPQLRQEKDLMDEVYG 693 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLI 744 FE+ + + L S +P V+RDLAF +P L + K L+ Sbjct: 694 FELDFRCLMKVLNQDNLLTPHFELYSTYPAVERDLAFFAALDVPVADLTKTMNKAGGNLL 753 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +V +FD +QGK++ EG++S+A + + T D+D+ + D+I + +VK+ LRS Sbjct: 754 TEVELFDDYQGKNVPEGQRSLAFSLAYRSGDRTLTDEDVEPVHDKIRQTLVKQFAVTLRS 813 >gi|326771638|ref|ZP_08230923.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces viscosus C505] gi|326637771|gb|EGE38672.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces viscosus C505] Length = 885 Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 256/903 (28%), Positives = 415/903 (45%), Gaps = 126/903 (13%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+D T +S E++ L +GLE E++ P + KVL+ E + + Sbjct: 6 IEWLREHVDVPTGLSAEQLAADLVRVGLEEERIVPPAVTGPLVVGKVLTREAKEQSNGKV 65 Query: 63 L---RIDTG-KHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + R+D G +H + +VCGA N VG V PG+ +P + + Sbjct: 66 INYCRVDVGPEHNDAPGTGKEPSDLPSRGIVCGAHNFDVGDYVVVCLPGAVLP-GDFRIA 124 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPI----------DAPVGGRLS-DYLELSD 154 RK G S GM+CS +EL + +D + I+ L + P G + L L + Sbjct: 125 ARKTYGHVSDGMICSARELGIGEDHSGIIVLQQWLAEHGHDGEEPPAPGTDAISILGLGE 184 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE----INISCPLSSESIPLEIKFDL-- 208 ++++++TP+R C +RG+A + + + + N + + + +D+ Sbjct: 185 EVLEINVTPDRGYCFAMRGVAREYSHSTGARFTDPADATNTGLYPNGVAGAGQGGYDVVV 244 Query: 209 -DDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 +D G C V+G+ + +P WM+ RL A G+R IS VD+TNYV LD Sbjct: 245 PEDPRPIHGRPGCDRYVARLVRGIDPSAPSPTWMQDRLTAAGMRPISLAVDVTNYVMLDL 304 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA--SDG---RIQSIAG 315 G P H FDA +++ + VRRA GE++ LD L P+++VIA DG R +AG Sbjct: 305 GQPLHAFDAGKLTAPIVVRRAKDGERLTFLDEVTRSLDPEDLVIADSPDGEGSRALVLAG 364 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 + GG + D +T DVL+E A +DP+++ARS + + T+S R ERGVD + + Sbjct: 365 VFGGALSEVDADTRDVLIEAAHFDPVSVARSSRRHKLPTESSKRNERGVDTELAPIAAQR 424 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 V L++ GGTA + N T P I +RL+G+ E +L +G +V Sbjct: 425 AVDLLVEYGGGTAEPVATDINRTRAPEPITMRADAAERLTGVAYGTERVTELLTTIGCTV 484 Query: 436 I--GEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS 489 G D V+ P+WR D+ A L EEI R+ G D I P+ + LS Sbjct: 485 ERGGSADDGTALLTVTPPTWRPDLVGPAHLAEEIARLDGYDAI---PVIVPTAPAGTGLS 541 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMR 545 Q R + R LA + +V+++ FI +L ++ + + NP++ D +R Sbjct: 542 ADQRARRDIVRALADAGLTQVLSYPFIGDIHDLLEIPADDARRQTVRLANPLAEDAPYLR 601 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----------------QKYMA 588 TS+L L+ RNV R + D A+FEV V P G + + Sbjct: 602 TSVLDSLVDVARRNVSRGLTDVAVFEVGSVTH---PAGTVPAPIPGTAGRPSQSEEAALE 658 Query: 589 AGI-------------RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 AGI SG+ G+GR W ADA+ V+ + Sbjct: 659 AGIPAQPTHIGAVMTGEHERSGVLGAGRPWD---------------WADAVEVVRTVAAA 703 Query: 636 DSLRFESGAPSW----YHPGRSGIIKTSA-----EI----VLGYFGEFHPNILDFFGLSN 682 + E AP + +HPGR+ I+ EI ++ + GE HP ++ GL Sbjct: 704 LGVTIEVRAPEYPYAPWHPGRTAEIRLPGRRRGKEIEPGRLIAHAGELHPRVVRALGLPE 763 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VD 741 C E+ LD + + + +V +S+ K D+A +VD+ A + +++ Sbjct: 764 RACAVEIDLDPL-LETARDAGAFQVKPVSTFPAAKEDIALVVDETTTAAEVEALVRQAAG 822 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 L ++V +FDVF+G LGEGKKS+A ++++ T ++ + R+V+ K A Sbjct: 823 DLAEEVRLFDVFRGPQLGEGKKSLAFSLVLRAPDRTLTAEETAGVRKRVVKRAAKLLGAE 882 Query: 802 LRS 804 LRS Sbjct: 883 LRS 885 >gi|298493037|ref|YP_003723214.1| phenylalanyl-tRNA synthetase subunit beta ['Nostoc azollae' 0708] gi|298234955|gb|ADI66091.1| phenylalanyl-tRNA synthetase, beta subunit ['Nostoc azollae' 0708] Length = 811 Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 236/840 (28%), Positives = 436/840 (51%), Gaps = 65/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ +S E++ +TLT G EVE +++R S IV KVL + +P+ D Sbjct: 1 MRISLTWLRELVEIKLSPEELAETLTIAGFEVEDIEDRRTWSNGVIVGKVLERQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + + +VCGA NVR + A G+ +P+ ++ + K+RG+ S GM+ Sbjct: 61 KLSICQVDIGADETLNIVCGAANVRADIYVPVATTGTYLPKIDLKIKPAKLRGVPSNGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L D I + +G + L L D I++V+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPTDLDGIHIFTQENLSLGSDVRPLLGLDDVILNVTATANRADALSMVGIARE 180 Query: 178 LVAAGLGKL---KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A G+L + N++ ++ ++ ++I+ ++ C + ++ ++ +P W+ Sbjct: 181 VAALTGGQLSIPQLENVTIAQNTGNLTVKIR----ETQACPAYISTVIEQIKIAPSPEWL 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT-------VRRACSGEKI 287 +QRL++ G+R I+ +VDITNYV L+ G P H FD R+ V + VR A +GE + Sbjct: 237 QQRLRSAGVRPINNVVDITNYVLLEWGQPLHAFDKERLQSVASSENLTVGVRFADAGETL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD Q LS N++I ++ + ++AG++GG+ ++T +++E AL+D + I RS Sbjct: 297 KTLDGQTRTLSTQNLLITANNKAVALAGVMGGEETQVHESTQSLILEAALFDSVAIRRSS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 ++LG+ +++ R+ERGV+ + +SLI L G I +P + Sbjct: 357 RSLGLRSEASGRYERGVNRAELEIANNRALSLINELASGV---ILQQEIFDTRPDPSTWS 413 Query: 408 NSEVKRLSGI--------------DVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWR-Q 451 +S + RL + ++ ++D +IL LG ++ + + ++V+VP +R + Sbjct: 414 HSILLRLDRVNEVLGPIQSEEETGELEVDDVEKILTALGCELLKDEECTWKVTVPPYRYR 473 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+E + DL+EEI R+YG D+ + LP + LSL Q R ++ L + + E++ Sbjct: 474 DLEREIDLIEEIARLYGYDKF-CDTLP--DKAEAGYLSLDQELLRKIRSYLRAAGLTELI 530 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 ++S + G +++ + NP+ A+ S +RT L+ GL+ A N+++ FE Sbjct: 531 HYSLVKP-------GEDKQIVLSNPLFAEYSALRTDLIAGLIDACQYNIEQGNGMLNGFE 583 Query: 572 VSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 + ++ + EG + M AGI G S + G+ WS E+ + F+AK SV Sbjct: 584 IGRIFWREE-EGLDEAEMLAGIMGGDSTL---GK-WSRDGREQT--LTWFEAKGILESVF 636 Query: 630 EPFVSLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 F +L+ E S HPGR+ + I LG FG+ HP + L + Sbjct: 637 RQF----NLQVEFQPENRDSRLHPGRTASLWVRG-IRLGTFGQVHPQLRREKSLPEAVYV 691 Query: 687 FEVYLDSIPIS-QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 F++ LD + + + K S+ RD+AF + + +I + L+ Sbjct: 692 FQLSLDVLLNTLDDDQLLVPKFQPFSTYPASDRDIAFFSPVKVTVSEIEKVITKAGKGLL 751 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D V +FD ++G+++ G++S+A +++ + + T D ++ + +++ E +V+K LRS Sbjct: 752 DSVELFDEYRGENVPPGQRSLAFRLIYRSIDHTLTDAEVEAVHNKVREALVEKFGVSLRS 811 >gi|325287567|ref|YP_004263357.1| Phenylalanyl-tRNA synthetase subunit beta [Cellulophaga lytica DSM 7489] gi|324323021|gb|ADY30486.1| Phenylalanyl-tRNA synthetase beta chain [Cellulophaga lytica DSM 7489] Length = 808 Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 246/838 (29%), Positives = 411/838 (49%), Gaps = 65/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK L D +K + LT +GLEVE + E+ L + VL+ ++P Sbjct: 1 MKISYNWLKQFLHIDWEADKTAELLTDLGLEVEGISEFESVKGGLKGIVVGHVLTCVKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + +D G +Q+VCGAPNV G A G+ + + KIRG Sbjct: 61 NADKLKLTTVDIGADAPVQIVCGAPNVDKGQKVPVATIGTTLYTAEGEAWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L D G +D E+ D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGQSHEGIMVLADDLTPGTPCADIFEVELDTVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGL--GKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL AGL ++K+ I+ P+++ E+ L++ D+D++ L + + + Sbjct: 181 FGVARDL-RAGLIQQEIKKELITPPVTNFNVENRSLKVTVDVDNNELAPRYCGVTISNLE 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P+W++ RL+++GL + +VD TNYV + G P H FDA++I + V+ +G Sbjct: 240 IKDSPDWLKNRLRSIGLTPKNNVVDATNYVLHELGQPLHAFDANKIKGHKIEVKTVAAGT 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K LD+ E +L ++++I + + IAGI+GGK +G +NTT + +E A ++P+++ + Sbjct: 300 KFTTLDDVERELHEEDLMICDEEKPLCIAGILGGKDSGVTENTTAIFLESAYFNPVSVRK 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKI 404 + K G+ TD+ +RFERG+D+Q + L+ SLI + GG SDI + P+++ Sbjct: 360 TAKRHGLNTDASFRFERGIDIQNVEYALRRAASLIKEIAGGDITSDI-----VELYPKRV 414 Query: 405 ----VFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKAD 458 VF+ E + +L G ++P E IL L V + +++P +R DV+ + D Sbjct: 415 EDHEVFLTYEKINKLIGQNIPGETIKSILTSLDIKVKNVSESGMGLAIPFYRVDVQRQVD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKRVLASRAMMEV 510 ++EEILR+YG + I K N S+ + +R+ + LAS+ E+ Sbjct: 475 VIEEILRVYGYNNI--------NFTTKLNASIATT-SRFEDYKLQNVIGNQLASQGFYEI 525 Query: 511 VNWSFIS----KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + S + K L + +LNP+S+D+S +R S+L L+A N++R + Sbjct: 526 MANSLTTIDYNKHSENL--KDSNSVAMLNPLSSDLSVLRQSMLFSGLEAISHNINRKKLN 583 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 FE Y N Y+ I + +G+ + D F K Sbjct: 584 LKFFEFGKTYHN-------YLDKRIENKHLSLFLTGKQEDENWYATQNKSDFFYLK---- 632 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 S IE S +R S +P + G+ + ++ + FG P+I F + + Sbjct: 633 SCIETVFSKLGIRKTSSSPVENDVFQEGLSLKANKLAVVEFGVIKPSITADFDIKQEVLF 692 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLID 745 + D+I K+ T K +S VKRD A ++D + L +I + + + Sbjct: 693 ADFNWDNIIKLAKQNTIVFK--EISKYPSVKRDFALLLDTKVNFKDLYDIAFETEKKFLK 750 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FDV+ G L +GKKS A+ + KDT +D I +M ++ N KK A LR Sbjct: 751 EVNLFDVYTGDKLPKGKKSYAVSFTLSDDKDTLKDKQIDKIMSKLRNNYEKKLGAELR 808 >gi|315640908|ref|ZP_07896004.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] gi|315483326|gb|EFU73826.1| phenylalanyl-tRNA synthetase beta subunit [Enterococcus italicus DSM 15952] Length = 806 Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 232/824 (28%), Positives = 420/824 (50%), Gaps = 39/824 (4%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + WL + +D V+ ++ D ++ G+EVE V EA L + V+ +PD Sbjct: 1 MFVSYKWLNELVDLGSVTPNELADKMSVTGIEVEGVTVPEAGLKNLVVGNVVECIDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G + Q+VCGAPN++ G+ + A PG+ I ++N+ + K+RG S GM Sbjct: 61 DHLHVCQVDVGGEELSQIVCGAPNIKAGVKVIVALPGARI-KDNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL +SD S I LP DA G + YLE+ D II++S+TPNR+D + + Sbjct: 120 ICSLQELGISDSVVPKEYSEGIYYLPADATPGESVFPYLEMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVA 230 RG+A + V A + + + + S+ E I + D L + + ++ V + Sbjct: 180 RGVAYE-VGAIYNQTPKFSDEVLVESDQPASEKIAVRVTDEQLVPAYQVRIIEDVTIAPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ RL G+R I+ +VD+TNY+ L G P H FD RI S + VR+A E+++ Sbjct: 239 PVWLQNRLMNAGIRPINNVVDVTNYILLLFGQPLHAFDYDRIGSKEIVVRQATDKEELVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + LSP+++VI + + ++AG++GG + TT V +E AL+DPI+I RS K Sbjct: 299 LDGETRVLSPESLVITNGEKPIALAGVMGGLDSEIVPETTTVALEAALFDPISIRRSAKQ 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 + ++S RFE+G++ + ++I L GGT + +A ++ K + Sbjct: 359 FHLRSESSARFEKGINQATVAQACDVAAAMIAKLAGGTVLKEAVVASHVEPKDVTVSIKL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + R G + + I + LGF+ +++ VS+P R D+ +AD++EE+ RIYG Sbjct: 419 DRINRYLGTSLSLAGVGGIFDALGFAYELTGEEYTVSIPPRRWDISIEADIIEEVARIYG 478 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D++ S LP + L+ Q TR ++ V+ E ++++ ++++S F Sbjct: 479 YDRLPST-LPTGETV-AGALTRSQRITRAIRNVIEGAGFSEAISYALTTEKKSNQFTMQA 536 Query: 529 RELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDTP 581 E L+ P++ D + +R +L+ GLL N+ R A +EV V+ + + P Sbjct: 537 SEPTRLDWPMTEDRAVLRMNLISGLLDDLAYNIARKNQSLAFYEVGRVFYQAGNPKKELP 596 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF- 640 + + ++A + +G + S + + + VD + K ++ + ++RF Sbjct: 597 KEETHLAFAL---------TGEIKSKDWQTKPQAVDFYQLKGVLETLFDSLSLTKAIRFV 647 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A + HPGR+ I + +G+ G+ HP + ++ E+ L+++ Sbjct: 648 ATDAIAELHPGRTADIYYE-DHRIGFIGQVHPATAKEYDIAETYVA-ELNLEAVIALSVG 705 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 + + V S V RD+A +V + +V+ I+ V + + V +FDV+QG S+ Sbjct: 706 EVRYQSVSKYPS---VSRDIAMLVKDDVANQDVVDAIQAVAGKYLTQVKIFDVYQGSSIE 762 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G KS+A + + T D++I+ M ++ +N+ + AV+R Sbjct: 763 KGMKSLAYSLTFSNPETTLTDEEIQKAMQKVEKNLQESLKAVIR 806 >gi|256394613|ref|YP_003116177.1| phenylalanyl-tRNA synthetase subunit beta [Catenulispora acidiphila DSM 44928] gi|256360839|gb|ACU74336.1| phenylalanyl-tRNA synthetase, beta subunit [Catenulispora acidiphila DSM 44928] Length = 834 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 251/864 (29%), Positives = 401/864 (46%), Gaps = 90/864 (10%) Query: 1 MKFTLSWLKDHLDT--DVSLEKICDTLTSIG---LEVEKVDNREALSPFTIVKVLSVE-- 53 M SWL+D+L + + D LT G LE P + KV ++E Sbjct: 1 MHVPYSWLQDYLTLPDGTTAFAVADKLTRTGGGKLETIARVGEGLTGPLVVGKVAAIEEL 60 Query: 54 ---RNPDLDCAILRIDT----GKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C ++ G + Q +VCGA N VG V A PG+ +P + + Sbjct: 61 TGFKKPIRHCQVVVTAAAEGPGSAADPQLIVCGARNFAVGDHVVVALPGAVLP-GDFRIA 119 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 RK G +S GM+CS +EL + +D I+ LP ++PVG YL L D +I+ +TP+R Sbjct: 120 ARKTYGRDSNGMICSARELGMGEDHDGIIVLPAESPVGVDAIAYLGLDDEVIEFEVTPDR 179 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCV 222 + +RGIA + A G ++ P + E P ++D C F V Sbjct: 180 GYTLSLRGIARE-AATGF----DVPFQDPAAIEVPAPGPAGHPVVVEDPVGCDVFVAQTV 234 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ +P WM++RL+ G+R IS +VDI NYV L+ G P H +D R+S + VRRA Sbjct: 235 TGIDPQAPSPLWMQRRLQMSGMRPISLIVDIANYVMLELGQPIHTYDRQRLSGPIVVRRA 294 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + LD + L P +++I D +AG++GG D +T+V+VE A ++ Sbjct: 295 AVGEVLETLDGAKRRLEPSDLLIVDDSGPIGLAGVMGGASTEIHDGSTEVVVEAAHFEAT 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYK 400 +IAR+ + + +++ RFERG D Q + + L++ L GGTA + + + Sbjct: 355 SIARTARRHKLFSEASKRFERGTDPQAAAAAAQRVADLLVELAGGTALEGGVTVVGEARR 414 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLG--FSVIGEYDKFEVSVPSWRQDVEEKAD 458 P I + R++G++ E++ L ++G + G+ D V+ PSWR D+ + +D Sbjct: 415 PAPITIPWTYPGRVAGVEYTREETEHRLRQVGCDLAAAGD-DGLVVTPPSWRPDLRDPSD 473 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EE++R+ G D++ S L + + QQ R V LAS EV+ + F+ + Sbjct: 474 LAEEVIRLEGFDRLPST---LPKAAAGTGYTHQQRIRRRVGTALASAGYSEVIAYPFLGQ 530 Query: 519 EQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 G + + + + NPIS + +MRT+LLPGLL A RNV R AD A+FE Sbjct: 531 ADLDALGLPENDPRRSTVVLANPISEEQPSMRTTLLPGLLAALRRNVGRGSADLALFEQG 590 Query: 574 HVYEND------------------------------TPEGQKYMAAGIRKGSSGIEGSGR 603 V+ P + +G+R+ +G G+GR Sbjct: 591 LVFRPRKDAAPVAPRLTVERRPTDEELASLDAALPLQPRRVAVVLSGLRE-PAGWWGAGR 649 Query: 604 L--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 W D E R + ADA V L +HPGR + Sbjct: 650 PAGWQDAVEA-ARII------ADACRV--------ELEVTQDQHEPWHPGRCARLGRGGR 694 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +V G+ GE HP ++ GL E+ LD + +++ T+ ++ SS+ +D+A Sbjct: 695 LV-GHAGELHPRVVAELGLPPRTAAMELELDRMIPAEEVLTQAPRI---SSMPVATQDVA 750 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +VD I T+ ++ L++ V +FDV+ G+ +GEG+KS+A + + T Sbjct: 751 LVVDAGIAEHTVEAALREGAGALLESVRLFDVYTGERIGEGRKSLAFALRFRAPDRTLTA 810 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 ++ D V +T AVLRS Sbjct: 811 EEATAARDSAVALAASRTGAVLRS 834 >gi|160933241|ref|ZP_02080630.1| hypothetical protein CLOLEP_02087 [Clostridium leptum DSM 753] gi|156868315|gb|EDO61687.1| hypothetical protein CLOLEP_02087 [Clostridium leptum DSM 753] Length = 793 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 241/831 (29%), Positives = 417/831 (50%), Gaps = 65/831 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M ++ WL + + D +S + + +T G +VE + E L + +VLS+E++PD Sbjct: 1 MNLSMKWLSEFVTLDPMSPREFAEAMTMSGSKVEGWEIEGEKLDKVVVGQVLSIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G IQ+V GA N+ G A GS + N + K+RG+ES GM Sbjct: 61 DKLVVCQVDAGGEAPIQIVTGASNLTAGDKVPVALDGSTLV-NGTKIKKGKLRGVESCGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 MCS EL L+ I L + +G + + L+D ++ +T NR DC V Sbjct: 120 MCSLGELGLTAHDFPYAIEDGIFVLQEECELGQDIRSVIGLNDTGVEFEITSNRPDCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A + A KE+ + P+ L++K + D LC ++ VK VR Sbjct: 180 IGLAREAAAT---FDKELKLHTPVVKAGHGDCAGLLDVKIEAPD--LCPIYSARIVKNVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W+R+RL+ +G+R I+ +VDITNYV L+ G P H FD I + + VRRA +GE Sbjct: 235 VKPSPRWLRERLRVMGVRPINNIVDITNYVMLEYGQPMHAFDLRSIDEGKIRVRRAKNGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI LD + L+ + +VIA G+ +IAG++GG+++G D+TT ++ E A + ++ Sbjct: 295 KITTLDGTNHVLTDNQLVIADAGKPVAIAGVMGGEYSGIVDDTTTIVFESANFLGSSVRI 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKI 404 + ++ G+ TD+ R+E+G+D IP L L+ L G D I + + PRKI Sbjct: 355 TARDQGMRTDASSRYEKGLDPNNCIPALNRACELVELLDAGDVMDGIIMDDHSKALPRKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + R + + E+ IL +LG ++D V VP++R D+ KAD+ EEI Sbjct: 415 PLEADWINRFLDLSLSGEEMRTILSKLGC----QFDGDLVIVPTYRPDLVHKADIAEEIA 470 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSV 522 R YG ++I S + + + S +Q + + R + + + E++ +SF+S + + Sbjct: 471 RFYGYNKIPSTSI---RGGAQGKYSARQKFDQTISRTMLAAGLSEIMTYSFVSPKVYDKI 527 Query: 523 LFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--- 576 L ++ + I NP+ D S MRT+ LP +L+ RN + A +FE++ Y Sbjct: 528 LVPADSPLRKSVVISNPLGEDTSIMRTTALPSMLEILQRNYNNRNASAHLFEIAREYIPT 587 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 EN+ P + + G G +D F K ++ + +SL Sbjct: 588 AENELPVEKNKLICGFYGGDG-------------------LDFFTVKGIVEALFDQ-ISL 627 Query: 636 DSLRFESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + E+ + +HPG+ + ++ + VLGYFG+ HP + + +G+ + + V LD + Sbjct: 628 YNWDIEAVRDQFAFHPGQCAKL-SAGDDVLGYFGQIHPKVAENYGIDERV--YAVTLD-V 683 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 + + K+ L V RDLA + ++ IP TL I++ ++++ + +FDV+ Sbjct: 684 DLLFTHASPEKQYHPLPKFPAVTRDLALLCEESIPVLTLEKTIQSACGQILESIKLFDVY 743 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 QGK + G+KSVA + ++ T ++ + M RI++ ++K + LR+ Sbjct: 744 QGKQIAAGQKSVAFNITLRSADSTLGEEQVNAAMKRIMK-ALEKMDVKLRT 793 >gi|167772049|ref|ZP_02444102.1| hypothetical protein ANACOL_03423 [Anaerotruncus colihominis DSM 17241] gi|167665847|gb|EDS09977.1| hypothetical protein ANACOL_03423 [Anaerotruncus colihominis DSM 17241] Length = 789 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 240/835 (28%), Positives = 407/835 (48%), Gaps = 81/835 (9%) Query: 5 LSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD-CA 61 + WL D++D ++ + + +T G +VE + A + + KV + R+PD D Sbjct: 1 MKWLADYVDVGGITAHEFAEAMTMSGSKVEGYETEGAKIKNVVVGKVTQIVRHPDSDHMF 60 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 I ++D G IQ+V GA NVR G + W P G+ I + K+RG+ES Sbjct: 61 ICQVDVGTGAPIQIVTGAQNVRAGDYVPVAMHDSWLPDGTHIKKG-------KLRGVESN 113 Query: 116 GMMCSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 GM+CS EL L+ +D I++ P D G + + L+D ++ +T NR D Sbjct: 114 GMLCSLAELGLTTHDFPYAIEDGIFILQEP-DLTPGQDIQSAIGLNDTCVEFEITSNRPD 172 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 C+ V G+A + A + K +NI P+ ++ I + ++ +LC + VK Sbjct: 173 CLSVTGLARE---AAVTFDKPLNIKAPVVKGAAGDIHSYLSVEVTAPALCPRYTARMVKN 229 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 ++ +P WMR+RL+A G+R I+ +VDITNYV L+ G P H FD + + VR A Sbjct: 230 IKIEPSPRWMRERLRASGVRPINNIVDITNYVMLEYGQPMHAFDYKYVEGGKIVVRNAKP 289 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE I+ LD LSP+ +VIA + ++AG++GG+++G D+T ++ E A +D ++ Sbjct: 290 GETIMTLDGVTRTLSPEMLVIADVSKPSAVAGVMGGEYSGIMDDTNMIVFESACFDGPSV 349 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPR 402 + K LG+ T++ RFE+ +D IP ++ L+ L G I A N ++PR Sbjct: 350 RTTAKKLGMRTEASGRFEKQLDPATTIPAVQRACELVELLGAGEVIGGMIDADNACHEPR 409 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 +I + GI+VP+ + RIL RL + G+ ++ PS+R D+E KAD+ EE Sbjct: 410 RIKLEPEWSNQFLGIEVPVGEMRRILTRLECKIDGD----DILPPSFRSDLEHKADIAEE 465 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRN--LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 I R YG D+I P+T + + + +Q R + + L ++ + EV +SFIS + Sbjct: 466 IARFYGYDKI-----PVTAIRGTADGGYTAKQKFERLINQTLLAQGLYEVATYSFISPKY 520 Query: 521 ----SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 ++ R + I NP+ D S MRT+ +P +L+ RN + A++E+ V Sbjct: 521 YDKINLPANSPLRACVTIQNPLGEDTSVMRTTTVPSMLEVLARNYNNRNKAAALYEIGTV 580 Query: 576 Y----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 Y + P+ + + G L+ D D F K +++ Sbjct: 581 YLPQEGRELPDERPVITLG-------------LYGDA-------YDFFALKGIVETLLRA 620 Query: 632 FVSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +D +ES A + +HPGR + + G GE HP + + + + + Y Sbjct: 621 -AGVDGCEYESSAEDAAFHPGRCARVLIGGKCA-GMIGEVHPAVCENYQIGTR--AYIAY 676 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 LD + + + + L RDLA I D +P L I++ V ++++T+ Sbjct: 677 LDETVLFENVAPE-RGYSPLPRFPAATRDLALICDDALPVAALEKAIRSAVGSTLEELTL 735 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FDV++G + +GKKSVA + ++ T D++ + R ++ ++ A LRS Sbjct: 736 FDVYRGAQVADGKKSVAYSLTMRAADRTLTDEESDAAVKRALK-ALRTIGAELRS 789 >gi|148655192|ref|YP_001275397.1| phenylalanyl-tRNA synthetase subunit beta [Roseiflexus sp. RS-1] gi|148567302|gb|ABQ89447.1| phenylalanyl-tRNA synthetase beta subunit [Roseiflexus sp. RS-1] Length = 835 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 243/847 (28%), Positives = 419/847 (49%), Gaps = 57/847 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDNREALSPF-----TIVKVLSV 52 M+ LSWLK+ +D + +E++ + LT GLE +E++ A P+ I ++L V Sbjct: 1 MRVPLSWLKEFVDITLPVEELAERLTRAGLECEGIERIGVEGADLPWDPERIVIGRILEV 60 Query: 53 ERNPDLDCAILR-IDTGKHQEIQVVCGAPNV-------RVG--LLGVWAPPGSCIPENN- 101 ++P+ D +L +D G VV GAPN+ R+ L GV+A G+ + + + Sbjct: 61 RQHPNADRLVLADVDYGADAPHTVVTGAPNLFPYKDKGRLSQPLKGVFAREGAELYDGHA 120 Query: 102 -----MIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI 156 + R +RGI S M+CSEKEL LS+D I+ LP DAPVG L DYL D + Sbjct: 121 EGWVKTRLKGRPVRGIMSDAMLCSEKELGLSEDHEGILILPDDAPVGMPLRDYL--GDVV 178 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 + + PN + C+ + G+A ++ A L+ + I ++ +++ LC Sbjct: 179 LKFDVLPNMARCLSIVGVAREVAALTGVPLRMPEMHVVEDGPPIEGRVRVTIEEPDLCPR 238 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV- 275 F ++GV +P WM++RL G+R I+ +VDI+NYV L+ G P+H+FDA R+++ Sbjct: 239 FTATLIEGVTIGPSPLWMQRRLTMAGMRPINNIVDISNYVMLELGGPNHMFDADRVAEQH 298 Query: 276 LTVRRACSGEKILALDNQEYDLSPD------NVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 L +R A GE+++ LD +E++L +++ S+AG++GG + TT Sbjct: 299 LIIRLARPGERLVTLDGKEHNLDASVGGGMLPLLVCDPQGPLSLAGVMGGASSEVSSTTT 358 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TA 388 +L+EVA+WDP I R G L +++ RFERGVD + V + +SL+ + GG A Sbjct: 359 RILLEVAVWDPTIIRRMGTALRARSEASKRFERGVDYELPPLVQRRALSLLQRIAGGRVA 418 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSV 446 + +KP + EV+R+ G+ + + +L LGF+ +I + V+ Sbjct: 419 QGMVDNYPRPWKPVVLDLTPREVRRIVGVSLSAAEIADLLRPLGFACDLIDDGAAVRVTA 478 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P +R+DV ADL EE+ R+YG D+I + E + N SL+ V+ +LA Sbjct: 479 PGFRRDVTMLADLCEEVARMYGYDRIPLTLMADVLPEQRNNPSLELELR--VRDLLAGAG 536 Query: 507 MMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 + E + +S S + L + NP++ + +R SLLP LL+A +N+ R Sbjct: 537 LDEAMTYSLTSMAAVAKINPADADASLYLRLANPLTPEREYLRRSLLPTLLEALAQNL-R 595 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFD 620 +FE+ VY P + R+ + + G R W E +D FD Sbjct: 596 ERERTLLFEIGRVYLKRAPGSGEVRPEEPRRLALALAGRRYERSWHTPDET---VMDFFD 652 Query: 621 AKADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 K + ++ +++ +RF + +HPGR+ ++ ++ G GE HP++ + Sbjct: 653 LKG-IVEMLLARLNIADVRFVALTDDPRFHPGRAARLERDGRVI-GVIGEVHPDVCERLE 710 Query: 680 LSNP-ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII- 737 ++ P E+ LD I + + + +S DLA + +PA + I Sbjct: 711 IAAPRAMAAELDLDLI----GELVEPVRYRAISRYPATTNDLALVTSVGVPAEQVTRTIR 766 Query: 738 KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 K L++ +T+FDV+ G+ +G GK+S+A +++ + T D ++ + +IV + Sbjct: 767 KYAGALLESLTLFDVYTGEQVGAGKRSLAYRLVFRAPDRTLNDAEVARIRQKIVRGLEHD 826 Query: 798 TNAVLRS 804 +A +R Sbjct: 827 LDATIRG 833 >gi|82750746|ref|YP_416487.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus RF122] gi|91208139|sp|Q2YX86|SYFB_STAAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|82656277|emb|CAI80691.1| phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus RF122] Length = 800 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 238/820 (29%), Positives = 413/820 (50%), Gaps = 37/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHNVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 + + P + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKK Sbjct: 706 PI----PIFPGMSRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKK 761 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+AI++ ++T D+ + + I E + + AV+R Sbjct: 762 SIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|303237040|ref|ZP_07323610.1| phenylalanine--tRNA ligase, beta subunit [Prevotella disiens FB035-09AN] gi|302482427|gb|EFL45452.1| phenylalanine--tRNA ligase, beta subunit [Prevotella disiens FB035-09AN] Length = 822 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 240/843 (28%), Positives = 424/843 (50%), Gaps = 61/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D +++ +++ LTS GLEV V+ R L + KVL+ E +P Sbjct: 1 MNISYKWLKEYVDFNLTPQELAAALTSTGLEVGSVEEVETIRGGLKGLFVGKVLTCEMHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI---PENNMIVNVRKIRGI 112 + D + +D GK + Q+VCGAPNV G + A G CI +++ + K+RG+ Sbjct: 61 NSDHLHVTTVDLGKEEPQQIVCGAPNVAAGQKVIVADLG-CILYDGDDSFTIKKSKLRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 +S GM+C+E E+ + I+ LP +A VG ++Y +L SD +I++ +T NR+D + Sbjct: 120 DSFGMICAEDEIGVGASHDGIIVLPEEAQVGMPAAEYYQLDSDWLIEIDITANRADALSH 179 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A E ++ P + ++ L I ++++ C+ +A + Sbjct: 180 YGVARDLYAWLKQNGYETSLHRPNCDKFAVDNNDLTIDVKIENTDACRRYACLSITDCEV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ +L +G+R I+ +VDITNYV + G P H FDA ++ + V+ G+K Sbjct: 240 KESPKWLKDKLNIIGVRPINNIVDITNYVMMAYGQPMHCFDADMVTGKQIIVKDKNEGKK 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD +E+ L ++ I + IAG+ GGK +G +NT +V++E A + P I +S Sbjct: 300 FVTLDGEEHTLGEHDLAICNAEEPMCIAGVFGGKGSGTYENTRNVVLESAYFHPTWIRKS 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG+D G I LK L L GG S T V Sbjct: 360 ARRHGLSTDASFRFERGIDPNGTIYALKQAAILCKELAGGKVSMEIRDEYPTKMEGFPVR 419 Query: 407 MNSE-VKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEIL 464 +N E RL G + + I L ++ E + ++ VP +R DV+ D+VE+IL Sbjct: 420 LNYEYADRLIGKQLGTDTIKSIAISLEMEIVKEDAEGLDLIVPPYRVDVKRACDVVEDIL 479 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSL-QQSRTRYVKRVLASRAMM-----EVVNWSFISK 518 RIYG + ++ +P E K +L++ +++ Y K + S ++ E++N S + Sbjct: 480 RIYGYNNVE---IP---TELKSSLTIAEEADKNYHKENIVSEQLVGAGFNEILNNSLTA- 532 Query: 519 EQSVLFGG------GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 QS G ++ ++++NP+S+D+ MR +LL G L++ RNV+R + FEV Sbjct: 533 -QSYYDGAELNAYPWEQTVKVVNPLSSDLGVMRQTLLFGGLESIRRNVNRKAQNLKFFEV 591 Query: 573 SHVYENDTPE----------GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 + Y+ + + Q+Y A G I+GS W+ EE ++ K Sbjct: 592 GNTYKYEQDKWSEESPIKAYNQEYHLALWVTGKR-IQGS---WAHADEE----ATFYELK 643 Query: 623 ADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 A+ +++ ++ +L E+ + + +KT + G +L ++ Sbjct: 644 ANVENILRRVGMAQSALLAETSHNNIFDKALE--LKTRGGKTIVEMGILSHKLLKKMDIA 701 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 P+ +++ + + + R + +S V RDLA ++D +I + I + + Sbjct: 702 QPVYYADIHWTN--LMKAIRKNKLQFQEISKYPSVSRDLALLLDSNIEFAQIEEIARQTE 759 Query: 742 -RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 +L+ V +FDV++GK+L EGKKS A+ ++Q T D I +M ++++N+ K A Sbjct: 760 KKLLKKVELFDVYEGKNLPEGKKSYAVNFILQDETKTLNDKAIDAIMQKLIKNITTKLGA 819 Query: 801 VLR 803 LR Sbjct: 820 ELR 822 >gi|302518068|ref|ZP_07270410.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. SPB78] gi|302426963|gb|EFK98778.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. SPB78] Length = 837 Score = 315 bits (806), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 260/867 (29%), Positives = 414/867 (47%), Gaps = 94/867 (10%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVETVEQLGAGLKGPLVVGQVRAIEELE 60 Query: 54 --RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + P C + D E+Q +VCGA N VG V PG+ +P + + RK Sbjct: 61 GFKKPIRFCHVDVGDANGTGELQEIVCGARNFAVGDKVVVVLPGAVLP-GDFAIAARKTY 119 Query: 111 GIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 G S GM+CS EL + DD + I+ LP VG + LEL D ++D+++TP+R C+ Sbjct: 120 GKTSHGMICSADELGMGDDGTHGIIVLPPQYEVGTDAIELLELVDEVLDIAVTPDRGYCL 179 Query: 170 GVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 +RGIA + +A GL L++ I++ P ++ P+EI D C F V G+ Sbjct: 180 SMRGIARETAIAYGL-PLRDPALIDVPGP-NAHGYPVEIA----DPFGCDRFTARTVAGL 233 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 P WM +R++ G+R +S VDITNYV L+ G P H +D S++ + VRRA +G Sbjct: 234 DPEARTPIWMARRIQKAGMRPVSLTVDITNYVMLELGQPLHAYDRSQVRGPIGVRRARAG 293 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA-----GCDDNTTDVLVEVALWD 339 E + LD Q+ L +++VI + +AG++GG G + TT+VLVE A +D Sbjct: 294 ETLKTLDGQQRKLDAEDLVITDERGPIGLAGVMGGAETEIADHGAELGTTEVLVEAAHFD 353 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 I IAR+ + + +++ RFERGVD + + V L++ L GGTA Sbjct: 354 QITIARAARRHKLASEASRRFERGVDPEAASAAAQRTVDLLVLLAGGTADAGVTEVIAPS 413 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 PR + R++G+ E +R L+++G V G+ D+ V+VPSWR D+ DL Sbjct: 414 APRTVTMPAGHPDRVAGVAYGRETVVRRLQQVGCDVYGQ-DELIVTVPSWRPDLTAPNDL 472 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EE++R+ G + + S L + R L+ +Q R V R LA +E +++ FI + Sbjct: 473 AEEVIRLEGYENLPST---LPKPPAGRGLTERQRFHRRVGRALAGHGYVEALSYPFIGTD 529 Query: 520 QSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLL------KATGRNVDRAIADFA 568 G +R + ++NP+S + +RT+LLPG + G+ RA+ D A Sbjct: 530 AFDALGLADDDPARRVVRLVNPLSDEEPALRTTLLPGAARCPAPQRGPGQPRPRALRDGA 589 Query: 569 IF-------------------EVSHVYE--NDTPEGQKYMA---AGIRKGSSGIEGSGRL 604 + + E PE +++ AG R+ +G G GR Sbjct: 590 RLPPARRVRRARAAPRGPPPRRTTQLGELNGGLPEQPRHLVGVLAGARE-RAGWWGKGRP 648 Query: 605 --WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---S 659 W+D E R V +A AD L GA +HPGR + Sbjct: 649 ADWADAVEA-ARTV-AAEAGAD-------------LVVRKGAYGPWHPGRCAELVAFVDG 693 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-R 718 AE V+G+ GE HP ++ GL C E+ LD++ + + ++ S +PV + Sbjct: 694 AERVIGHAGELHPRVIKALGLPARACATELDLDALERAGAGAVQAPRI----SNYPVATQ 749 Query: 719 DLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +V +PA + + ++ L++ + +FDV+ G L EG KS+A + + T Sbjct: 750 DVALVVPADVPAAEVESALREGAGELLESLRLFDVYTGDQLAEGHKSLAYALRFRAADRT 809 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 ++ D V + T AVLR Sbjct: 810 LTVEEATAARDAAVALAAEHTGAVLRG 836 >gi|21282751|ref|NP_645839.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus MW2] gi|49485977|ref|YP_043198.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus MSSA476] gi|30316242|sp|Q8NX60|SYFB_STAAW RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|56749528|sp|Q6GA75|SYFB_STAAS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21204189|dbj|BAB94887.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus MW2] gi|49244420|emb|CAG42848.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus MSSA476] Length = 800 Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S +++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKDKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPDTTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMSVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|281357056|ref|ZP_06243546.1| phenylalanyl-tRNA synthetase, beta subunit [Victivallis vadensis ATCC BAA-548] gi|281316614|gb|EFB00638.1| phenylalanyl-tRNA synthetase, beta subunit [Victivallis vadensis ATCC BAA-548] Length = 799 Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 238/820 (29%), Positives = 412/820 (50%), Gaps = 38/820 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M + +WL ++ D + +CD LT G+EVE V++ + +V ++L + +PD D Sbjct: 1 MDISRNWLAQYVAIDCDIPTLCDKLTMAGIEVEAVESAGTVPAGVVVGRILERKPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIESTG 116 ++ R+D G+ + IQ+VCGAPN G + A G+ PE + + K+RG+ES G Sbjct: 61 HMSVCRVDVGQGEPIQIVCGAPNCDAGNVVPVATIGTVFHTPEGDFKIKKSKLRGVESMG 120 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 MMCSEKEL LSD+ +M L +G + + L D I+V +TPNR D + + G+A Sbjct: 121 MMCSEKELGLSDNHEGLMILDSSLKLGTPV-ETLFPGDTRIEVEVTPNRPDWLSMWGVAR 179 Query: 177 DL--VAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 D+ + KL EI + C IP ++ LC+ + ++ V+ +P W Sbjct: 180 DVSCLLDTPAKLPEITVPEC-----DIPAPGLVTVEAPDLCRRYIGRVIRNVKVGPSPKW 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV-RRACSGEKILALDN 292 + +RL+++GLRSI+ +VD+TN+V ++ G P H FD ++ V RRA GE+I LD Sbjct: 235 LVERLESIGLRSINNVVDVTNFVLMELGQPLHAFDLDKLEGKRVVARRAKPGEEITTLDG 294 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + L ++VIA + ++AG++GG+++G + TTDVL+E A++ P NI + + LGI Sbjct: 295 KTLTLQERHLVIADAVKPMALAGVMGGEYSGVTEATTDVLLESAVFFPSNIRATSRELGI 354 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEV 411 +DS YR+ERGVD V LIL+ GG + + N K++ + Sbjct: 355 SSDSSYRYERGVDYDMASLASDRAVQLILATAGGELASEKVDVNSGRPAEKVIPCRFDRI 414 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L G +V E I +L V V+ P +R D+E +ADL EE+ RI G+D Sbjct: 415 RSLIGAEVSNERIADIFRKLHLKVDDVTSGGCTVTAPLFRLDLEREADLAEEVARINGLD 474 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I P+ R + Q +T ++ + E +++S ++ ++ +RE Sbjct: 475 RIPEIPVAAKMCGSIREDAYQALQT--LRDRVIDLGFYECMHYSMVNVNSALADRRFRRE 532 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT---PEGQK 585 +E+ NP+S +++ +R LL +L RN+ R + +FEV V+ + PE + Sbjct: 533 DLIELKNPLSLELAVLRPGLLGEMLGTIERNISRRNLNLRLFEVGKVFCGNAELFPEERF 592 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + + SG+ R ++ EE D +D K S+ E ++ +F + Sbjct: 593 ELCMAL----SGLRQPERYSAELKEE----YDFYDLKGALESLFE-LANVKRYKFVAADD 643 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + + PGR+ + + G+FGE ++ + S P+ ++ ++ I + R+ Sbjct: 644 ARFRPGRAAEVWIEGKKA-GHFGELAADLTRGWRTSYPVFAAQLDVEVIVNADHGRS--- 699 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSL-GEGKK 763 V S RD+AF+ D+ + G ++ I+ ++ V +FD+F L E KK Sbjct: 700 YYVPFSLFPATSRDVAFVADEKLEHGAILEFIRRSKPADLESVRLFDIFVDDKLKAEHKK 759 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+A Q+ + + T D ++ +++ E + K+ LR Sbjct: 760 SMAYQLTFRNAERTLTDAEVNSRFEKLREKLAKELKVELR 799 >gi|332519603|ref|ZP_08396067.1| phenylalanyl-tRNA synthetase, beta subunit [Lacinutrix algicola 5H-3-7-4] gi|332044162|gb|EGI80356.1| phenylalanyl-tRNA synthetase, beta subunit [Lacinutrix algicola 5H-3-7-4] Length = 808 Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 251/832 (30%), Positives = 408/832 (49%), Gaps = 53/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +W+K L D E+ + LT +GLEVE +D ++ L + +VL+ E++ Sbjct: 1 MKISYNWIKQFLKIDWPTEQTSELLTDLGLEVEGLDTYQSVKGGLEGVIVGEVLTCEQHS 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNM-IVNVRKIRGI 112 + D + ++ G +Q+VCGAPNV G A G+ + PE + KIRG Sbjct: 61 NADKLKVTTVNIGTGDTLQIVCGAPNVAAGQKVPVATIGTTLYTPEGEAWTIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM LP D VG +D ++ +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGKSHDGIMVLPEDTVVGTPCADLFKIENDHVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS------ESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A DL AGL + K+INI S +S L+I ++ + L + + GV Sbjct: 181 FGVARDL-KAGL-QHKDINIELITPSVSSFYVDSRTLKIDVEVANKELAPRYCGVTISGV 238 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 + +P+W++ RLKA+GL I+ +VDITNYV + G P H FDA++IS + + V+ G Sbjct: 239 KVAESPDWIKHRLKAIGLSPINNIVDITNYVLHELGQPLHAFDANKISGNKIEVKTLEKG 298 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K LD E +L D+++I + IAG+ GG +G D TT++ +E A ++P+++ Sbjct: 299 TKFTTLDGVERELHEDDLMICDTEKPLCIAGVFGGIDSGVTDGTTNIFLESAYFNPVSVR 358 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK 403 ++ K + TD+ +RFERG+D LK LI + GG SD A + + Sbjct: 359 KTAKRHALNTDASFRFERGIDPNITEYALKRAALLIQDIAGGEITSDASDAYPNKIEDFQ 418 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 + +V +L G ++P E IL L V + +++P++R DV+ +AD++EE Sbjct: 419 VHLTFDKVTKLIGQEIPKETIKSILSSLEIKVNNVTETGLGLTIPAYRNDVQREADVIEE 478 Query: 463 ILRIYGVDQIKSEP---LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV-----NWS 514 ILR+YG + I + ++ + LQ V L S+ E++ N + Sbjct: 479 ILRVYGYNNIITTTKLNASISNASKFEDYKLQN----VVGNQLVSQGFYEIMANSLTNPN 534 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +I + + + + +LNP+S D+S +R SLL L+A N++R + FE Sbjct: 535 YIELSEQL---KEEHNITMLNPLSKDLSVLRQSLLFSGLEAVSHNINRRQNNIKFFEFGK 591 Query: 575 VYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 Y N T E K++ I G+ E WS SE+ F K + +++ Sbjct: 592 TYHNYNGTREEPKHLTLLI-TGNKTEEN----WSTPSEKST----FFHLKGNVDAILSR- 641 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + R S + GI + + VL FG I F +S + D Sbjct: 642 LGISRYRATSVKSDLF---SEGIQYSQGKTVLVDFGIVKSKINKHFDISQEVLFANFNWD 698 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 +I I KR K K + V+RD A ++D ++ + I + + +L+ +V +FD Sbjct: 699 NI-IEVAKRNKI-KFTPIPKYPEVRRDFALLLDNNVTFDDINTIARQTEKKLLKNVNLFD 756 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+QGK+L GKKS A+ T D I +M+++ N K +A LR Sbjct: 757 VYQGKNLPNGKKSYAVSFTFLDENKTLTDKVIDKIMNKLQSNFENKLSAELR 808 >gi|225870312|ref|YP_002746259.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] gi|225699716|emb|CAW93453.1| phenylalanyl-tRNA synthetase beta chain [Streptococcus equi subsp. equi 4047] Length = 801 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 238/827 (28%), Positives = 427/827 (51%), Gaps = 50/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK +D DVS ++ + +++ G+EVE + + E LS + ++S + P+ Sbjct: 1 MLVSYKWLKKLVDIDVSPAELAEKMSTTGIEVEGITSPSEGLSKLVVGHIVSCDAVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++TG + Q+VCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVNTGDDELRQIVCGAPNVKAGINVIVALPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL L D S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLPDAIIPKDFSEGIQILPETAAAGDSIFPYLDLDDNIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGKL-----KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK K + S +++S+ + I DS +A V+ V Sbjct: 180 VAHE-VAAIYGKSVSFPEKPLIESAKAAADSLEVAI-----DSDKVLTYASRIVENVTVK 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W++ L G+R I+ +VD+TNYV L G P H FD +D L R A GE++ Sbjct: 234 PSPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDYDTFADHKLLARDAREGERL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L+ D++VI + ++AGI+GGK ++ V++E A+++ +I ++ Sbjct: 294 VTLDGEERVLTTDDIVITVADQPVALAGIMGGKSTEITASSKTVVLEAAVFNGKSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVF 406 L + ++S RFE+G++ ++ L +++ L GGT + A ++ P ++ Sbjct: 354 SRLSLRSESSSRFEKGINHDTLVEALDFAAAMLEELAGGTVLAGRLQAGSLPTNPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G + D I RLGF + G + F VSVP R D+ ADLVEEI RI Sbjct: 414 SLDYVNVRLGTALSFTDIEGIFARLGFGISGTAEHFTVSVPRRRWDITIPADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA----MMEVVNWSFISKEQSV 522 YG D+ LP T + + + + ++T+ ++R L A + E+++++ + E+++ Sbjct: 474 YGYDR-----LP-TTLPEAAGTAAELTKTQALRRQLRGLAEGLGLTEIISYALTTPEKAL 527 Query: 523 LFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 F +L E++ P+S + S +R S++ G+L NV R + A++E+ V+E + Sbjct: 528 EFAMKPSQLTELMWPMSVERSVLRQSMVSGMLDTLAYNVARQQHNLAVYEIGKVFEQEG- 586 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPF-VSLDSLR 639 ++ + + + I G L +DK + + + VD + K + + +S+D + Sbjct: 587 NPKETLPTELNHFAFAITG---LVADKDFQTQAQAVDFYHTKGILECLFDKLGLSVDYIP 643 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS-- 697 + A HPGR+ I+ + V+G+ G+ HP + + E Y+ + ++ Sbjct: 644 TKEMAS--MHPGRTARIQLGDQ-VIGFVGQVHPQAAKAYHIP------ETYVAELDLTAI 694 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 + V ++ + RD+A +VD +++ I + + + ++ +FD++ G Sbjct: 695 EAALPAHHAFVEITKYPAMVRDIALLVDASTSHQAILSAITSAKVKRLTEIKLFDIYAGA 754 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + GKKS+A + Q D D+++ M++I + +V+K A +R Sbjct: 755 IIAAGKKSMAYSLTFQNPTDNLTDEEVAGYMEKITKALVEKVGAEVR 801 >gi|167754580|ref|ZP_02426707.1| hypothetical protein CLORAM_00082 [Clostridium ramosum DSM 1402] gi|167705412|gb|EDS19991.1| hypothetical protein CLORAM_00082 [Clostridium ramosum DSM 1402] Length = 796 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 226/805 (28%), Positives = 400/805 (49%), Gaps = 47/805 (5%) Query: 19 EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVC 77 +++ D +TSIGLEVE + + + TI V +PD D + +++ + Q+VC Sbjct: 20 KELADKITSIGLEVEGMHDLTRGNNMTIGYVKECMPHPDSDHLNVCQVEVRPGEIRQIVC 79 Query: 78 GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS------DDSA 131 GAPNV G + A PG C + ++ KIRG+ES GM+CS EL L +D Sbjct: 80 GAPNVATGQKVIVANPG-CDLGDGFVIKESKIRGVESNGMICSIAELGLDQRLLKPEDKD 138 Query: 132 SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINI 191 I L DAPVG +Y+ L D I+++ LTPNR+DC+ + +A + VAA LG+ E+N+ Sbjct: 139 GIHVLDTDAPVGAEPLEYMGLKDTILEIGLTPNRADCMAMTSLAYE-VAAILGR--EVNL 195 Query: 192 S--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISAL 249 + +E + +K + D LC F VKGV +P W+R L A G++ I+ + Sbjct: 196 PEVSFIGAEGSGISVKVETD---LCPFFGAKLVKGVTTKESPEWLRNALIASGIKPINNI 252 Query: 250 VDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 VDI+N+V L+ G P H++D +++ + + K + LD +EY + P ++++++D Sbjct: 253 VDISNFVMLETGQPIHMYDYDKLNKKEFIIKTGFDCKEVMLDGEEYKIEPADLIVSTDAG 312 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG-VDLQG 368 I IAG++G D+NTT++++E A +D + + + L ++TD+ + +G ++ Sbjct: 313 IGCIAGVMGANSTKIDENTTNIVIEAATFDGATLRETARRLNLLTDASQHYIKGALNTAN 372 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 + +L+ +L++ L + ++ K + S+V + G + ++ I Sbjct: 373 SLMILERCANLLVELAEAKEVYQSVTTDLKIKDCFVRVTTSKVNGVLGTKITTDEIKDIF 432 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 L F + ++F V VP++R D+ ADL+EE+ R+YG D+I S ++ KR Sbjct: 433 SALKFEYTIDGEEFNVKVPTYRNDITLAADLIEEVARMYGYDKIPSTLPEMSMTVGKR-- 490 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMSNMRT 546 + Q++ ++ +L + + E + +S S F +++ P+ + S R Sbjct: 491 TDVQAKKHLIRNLLKDQGLHETLTYSLTSPVMVDDFNIFHTNESVKLAMPLGEERSVTRK 550 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWS 606 S++ LL+ N I D IFE+S Y + G+ + I G Sbjct: 551 SIIGSLLQVINYNQSHNIKDVNIFELSTTY-----------SKGVELQNLAIACCGEYNG 599 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE----SGAPSWYHPGRSGIIKTSAEI 662 ++ D + K ++ + ++ R++ S +YHPGR+ I E+ Sbjct: 600 LPFKQISYKADYYLVKGFVETIFKNL-GIEESRYKLVRASQDDKYYHPGRTAYIMIGKEV 658 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS-SLHP-VKRDL 720 V G G HP + + + +VY+ + ++ KT KV ++P V RD+ Sbjct: 659 V-GVVGNIHPLMEKKYNVK------DVYIVELNLTTLLNLKTSKVKFTEIPMYPSVSRDI 711 Query: 721 AFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A ++DQ IP + I++ +L+ + +FDV+ G+ + GKKSVAI +L Q K T Sbjct: 712 ALVMDQDIPTFDICRKIVQASKQLVKETKIFDVYAGEHIEAGKKSVAINLLFQDPKGTLE 771 Query: 780 DDDIRILMDRIVENVVKKTNAVLRS 804 + + M++I+ V K AVLR+ Sbjct: 772 EATVNAAMEKILAAVEKDFGAVLRA 796 >gi|261414693|ref|YP_003248376.1| phenylalanyl-tRNA synthetase, beta subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371149|gb|ACX73894.1| phenylalanyl-tRNA synthetase, beta subunit [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326559|gb|ADL25760.1| phenylalanyl-tRNA synthetase, beta subunit [Fibrobacter succinogenes subsp. succinogenes S85] Length = 811 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 240/830 (28%), Positives = 405/830 (48%), Gaps = 46/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +L+WL+ H+D S E + LTSIGLEVE ++ + + KVL+ + +PD D Sbjct: 1 MKVSLNWLRRHVDLPESAEDVAKALTSIGLEVEGMEEPGKVYDKLLVAKVLTCDPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP---ENNMIVNVRKIRGIEST 115 I ++ G + IQVVCGAPNV G V AP G+ +P + + KIRG+ES Sbjct: 61 HLHITTVNDGTNT-IQVVCGAPNVAAGQTVVLAPIGAELPLPDGTKLKMKKSKIRGVESF 119 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+C+E E+ LSDD IM L P G L + D ++++TPNR D + RG+A Sbjct: 120 GMICAEDEIGLSDDHGGIMVLDDSIPAGTPFVS-LGMYDVCFELNVTPNRPDALSHRGVA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 +L A LK + + SE+ I ++ C + +K V+ +P W+ Sbjct: 179 RELAAKFNRPLKPLAYNFKEDSEAASSAISLEVVPGCGCSRYVGRVIKDVKVEKSPAWLA 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 + L AVG+ SI+ +VDITN++ +D G P H FD ++ + + VRRA GE I +D+ Sbjct: 239 KLLHAVGMNSINNVVDITNFILMDVGQPLHSFDMDQLHGNKIKVRRAVKGEHIETIDHTA 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 ++L +++VI R +AG++GG + D T +V +E A ++P I + K L I T Sbjct: 299 HELIENDLVICDGDRPACVAGVMGGVESEIVDATKNVFLESAWFNPTVIRKQAKRLCIST 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGG---TASDICIARNITYKPRKIVFMNSEV 411 DS YRFER +D K+ ++I + GG S + + ++ + Sbjct: 359 DSSYRFEREIDFATQDEYSKYACAMIQEVAGGRILKGSVEYTGEDHKKENNQVTLRVARA 418 Query: 412 KRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G++V E + L + V+ + + +PS+R D+E + DL+EEI R+ G D Sbjct: 419 AKVIGMEVSAEQIEKFLTGIALEVVKKDAESLTFKIPSFRPDLEREVDLIEEIARLIGFD 478 Query: 471 QIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS-VLFGGGQ 528 I P L + + N L + R +++ L++ + E ++ F SK ++ LFG Sbjct: 479 NI---PYSLPKFTMQPNELPAIEVLNRKIRKTLSAMGLHECLSLRFTSKARTEALFGPES 535 Query: 529 RELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------- 576 + +LNP+S ++ + TSLLP LLKA N +FEV+ Sbjct: 536 DDRRSKPALLLNPLSEELGAVPTSLLPNLLKAVAENEKNRPGSVRLFEVAKGQFKRDRKD 595 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 E DT + + A + +G D ++ + +D K S + + Sbjct: 596 ERDTGFDESNLVA--------LTIAGNFDVDPLNDKPKQIDFAAFKGFVQSFFKRLGLVV 647 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 R + + HPG+ I + VLG GE HPN L +N I +E Y+ + Sbjct: 648 EFRAAAKPELFLHPGKQAEIVCNG-TVLGTMGELHPNCLK----ANEI-SYETYVMEADM 701 Query: 697 SQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 + + KK+V S P RD++ V + + ++ IK ++ + + +T+ ++ Sbjct: 702 DKMEHESHKKIVFQAFSRQVPSTRDISIEVAKSMTHEDVLARIKALNPKNLAKITLKSIY 761 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G+ + GKK++ + Q + T DD++ +++ + +V+ + VLR Sbjct: 762 EGEKIEAGKKNMVYSLTYQAMDRTLTDDEVNKAHNKLRDKLVQNGDIVLR 811 >gi|57651748|ref|YP_186012.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus COL] gi|88194840|ref|YP_499638.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus NCTC 8325] gi|151221262|ref|YP_001332084.1| phenylalanyl-tRNA synthetase subunit beta [Staphylococcus aureus subsp. aureus str. Newman] gi|221140463|ref|ZP_03564956.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|258451836|ref|ZP_05699857.1| phenylalanyl-tRNA synthetase subunit beta chain [Staphylococcus aureus A5948] gi|262051663|ref|ZP_06023882.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus 930918-3] gi|282919916|ref|ZP_06327645.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9765] gi|304381304|ref|ZP_07363957.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|66773838|sp|Q5HGU5|SYFB_STAAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|57285934|gb|AAW38028.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus COL] gi|87202398|gb|ABD30208.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus NCTC 8325] gi|150374062|dbj|BAF67322.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus str. Newman] gi|257860444|gb|EEV83271.1| phenylalanyl-tRNA synthetase subunit beta chain [Staphylococcus aureus A5948] gi|259160398|gb|EEW45423.1| Phe-tRNA synthetase beta chain [Staphylococcus aureus 930918-3] gi|269940633|emb|CBI49012.1| putative phenylalanyl-tRNA synthetase betachain [Staphylococcus aureus subsp. aureus TW20] gi|282594632|gb|EFB99616.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus A9765] gi|302750962|gb|ADL65139.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus str. JKD6008] gi|304340287|gb|EFM06228.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|329313807|gb|AEB88220.1| Phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus T0131] gi|329730763|gb|EGG67142.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus aureus subsp. aureus 21189] Length = 800 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 241/821 (29%), Positives = 417/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKPETTSNELDLSANDELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + Sbjct: 298 LDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPILAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|312898452|ref|ZP_07757842.1| phenylalanyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] gi|310620371|gb|EFQ03941.1| phenylalanyl-tRNA synthetase, beta subunit [Megasphaera micronuciformis F0359] Length = 808 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 238/825 (28%), Positives = 403/825 (48%), Gaps = 39/825 (4%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPD 57 MK + W++D++ D S ++ D LT G+ VE+V+ E + K+ + +P+ Sbjct: 1 MKSSFEWMQDYVTIDKSRTPQEFADVLTIAGIPVEQVEYWGEDIQNVITGKITKIVPHPN 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ +E+ +V GA NVR G + A G+ +P + + K+RG S GM Sbjct: 61 ADKLVICTLNMGDKELTIVTGATNVREGQIVPVAVHGAHLP-GGVKIKKSKLRGETSEGM 119 Query: 118 MCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EL +L ++ + I LP D PVG L D + + LTPNR+DC + Sbjct: 120 LCSAHELGLDDSLLLPEERSGIWILPEDTPVGVDAVAQTGLRDVVYEYELTPNRADCFSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G++ + + K + SE I ++K +DDS LC +A V+ +P Sbjct: 180 VGLSREFAVLSRQEAKLPQVEVQEGSEKIDGKLKVTIDDSELCARYAARMFYNVKVGKSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 WM+QRL+ G+R I+ +VD+TNYV ++ G P H +D +++ L RRA GEKI L Sbjct: 240 FWMQQRLRKAGVRPINNVVDVTNYVMIEFGIPLHAYDYDKLAGHELIARRAKKGEKITTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E L+ + +VIA + +AG++GG + + TT V++E A + +I ++G+ L Sbjct: 300 DQVERQLTENMLVIADAEKASCVAGVMGGFDSEVTEETTTVVLECASFKGSSIRKTGRAL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMNS 409 G+ +++ RFERG+D +G + L L+ + + I + + R+I F Sbjct: 360 GLRSEASARFERGLDSEGCVHSLNRAAQLLQQMGACEVAAGVIDEYVRPQEVRRIDFTAQ 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V G D+ E+ + IL LGF+ VP+WR D E D+ EE+ RIYG Sbjct: 420 RVNDFLGTDISEENMISILATLGFTTEKHDKVLTAVVPTWRIDCTEMPDIAEEVARIYGY 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFG-- 525 + I+S PL+ + + + + + ++ VL+ + E V +SF+S + + +LF Sbjct: 480 ENIQS-TRPLSNISEGQE-GFEHAVREHISSVLSRSGLNETVTFSFMSADSLKKLLFKED 537 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + + ILNPI+ + MRT+LLP L+ RN AI+E++ Y + Sbjct: 538 DAHYQAVPILNPITEEFPLMRTTLLPSLMDVLVRNQAVKNDRVAIYEIASTYRPKSLPVT 597 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEE----RCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + + E +G L+ ++++ + D +D K +V+ LR Sbjct: 598 ELV-------DENREITGLLYGNRTQASWPYKAEGFDFYDVKGLMEAVLTSLGIHAQLRA 650 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL-DSIPISQK 699 AP HPG++ + VL FGE HP +D + ++ P+ FE+YL D +P+ Sbjct: 651 SDYAP--LHPGKAAEY-VVGDTVLCRFGELHPQCVDNYDVAGPVYVFEMYLKDLLPLINL 707 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSL 758 K + + RDLA +V L+NII+ + ++ V +FDV+ G+ + Sbjct: 708 IPDYHK----VGKFPALTRDLAVLVPVSAKHADLLNIIREKGGQYLEGVHLFDVYSGEQV 763 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G S+A + + + T D DI+ + I+E + +K A LR Sbjct: 764 PRGFVSLAFALTFRSAEGTLSDADIQQPVTDILEELQEKAGAKLR 808 >gi|302332747|gb|ADL22940.1| putative phenylalanyl-tRNA synthetase beta chain [Staphylococcus aureus subsp. aureus JKD6159] Length = 800 Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 236/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDSIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + ++T+++++E A++D ++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEHTSNIVIEGAIFDSVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVQVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ + L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFEKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFAMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ + + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGDGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVV----NQWQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYE 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|311740490|ref|ZP_07714317.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium pseudogenitalium ATCC 33035] gi|311304010|gb|EFQ80086.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium pseudogenitalium ATCC 33035] Length = 837 Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 249/844 (29%), Positives = 394/844 (46%), Gaps = 80/844 (9%) Query: 15 DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTG 68 +VS + +G E E E+ P I +V+ +E + P C + Sbjct: 20 NVSAADMDSGFVRVGFETEGYAAVPESTGPLVIGQVVEIEELTQFKKPIRYCQVNVGQAN 79 Query: 69 KHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS 127 E+Q ++CGA N R+ V A PGS +P + R+ S GM+CS EL L Sbjct: 80 GTGELQGIICGARNFRLNDYVVVALPGSELP-GGFKIAARETYDHISNGMLCSGAELGLG 138 Query: 128 DDSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI------ALDLV 179 + I+ L D VG + L D DV++TP+R + RG+ A DL Sbjct: 139 AQANGIIVLGDDVADKVGEDARPIIGLHDTDFDVNITPDRGYALSARGLSREIASAFDLE 198 Query: 180 AAGLGK---LKEINISC-PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 A + K + I+ S P + S+ I L+ + + F + V G+ P W+ Sbjct: 199 FADIAKDPSVAGIDTSVVPAAQGSL---IDVTLNPETKAQRFGLRKVSGIDPQARTPFWL 255 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 + L G RS++ DITNYV L G P H FDA+ I L VR A GEK LD+ + Sbjct: 256 ERELMLCGQRSVNLPTDITNYVMLLLGAPMHAFDANVIQGNLVVRNANEGEKFETLDHVK 315 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +LS ++VVI D IQS++G++GG + TTDV+ E A+WDPI +AR+ + + + Sbjct: 316 RELSAEDVVICDDNGIQSLSGVMGGTTSEISAETTDVVFESAIWDPITVARTSRRHKLSS 375 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 +S RFERGVD + L +L+ L GGT + K I ++ Sbjct: 376 ESSRRFERGVDPAVVEVALDTACALLQQLAGGTIEESRTLIGDVAKREPIALRTAKASEY 435 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 +G+D E + LE +G +V E + +V+ +WR D+ DL+EE+LR+ G++ I Sbjct: 436 AGVDYSRETVISRLEEVGCTVADEGEILQVTPATWRTDISMDVDLIEEVLRLEGLEDI-- 493 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQR 529 P L R L+ Q R R + LA EV+ F++ + ++G +R Sbjct: 494 -PTVLPTPAGGRGLTPAQKRRRAIGHGLAYAGYAEVLPAPFVANDTFDVWGLNKDDARRR 552 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN----------- 578 +E+ NP+ AD + + T+LLP +L+A GRNV R +D A++ + V Sbjct: 553 TVEVQNPLEADKAILSTTLLPNMLEAIGRNVARGRSDLALYGLQQVAFKRAAASPMPSVE 612 Query: 579 ------------DTPEGQKYMAAGIRKGS---SGIEGSGRLWSDKSE-ERCRFVDLFDAK 622 DT Q A + G+ G G GR +S E R V A+ Sbjct: 613 QRPSEQVVSELLDTLPEQPLHVATVATGNIEHEGPWGEGRAYSYADAIESARQV----AR 668 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLS 681 A + + E+ +HPGR +K + ++VLG+ GE HP +L+ L Sbjct: 669 AAGVDI----------ELEAANVLPWHPGRCAAVKVAGTDVVLGHAGELHPQVLEALNLP 718 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNV 740 C E+ + ++P+ +K LSS + +D+A +VD+ +PA + + + Sbjct: 719 ARTCAMELDVTAMPLEEKFPAPV-----LSSFPALHQDIALVVDEDVPAERVRATVEEGA 773 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 LI+ V +FD+F+G+ LGEGKKS+A Q+L + T D+++ E ++ A Sbjct: 774 GELIESVELFDIFRGEQLGEGKKSLAFQLLFRAADRTLTDEEVNEHRTAAAELAKQRLGA 833 Query: 801 VLRS 804 +R+ Sbjct: 834 EMRA 837 >gi|295425285|ref|ZP_06817988.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295065061|gb|EFG55966.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 804 Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 237/823 (28%), Positives = 414/823 (50%), Gaps = 39/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + + +T G+E+ V++ +E L + VL + Sbjct: 1 MLVSYNWLQDFLNLDQDPKDLAEKITRTGVEIASVNHPQEGLKKIVVGHVLDCKAVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGENVIVALHGARIAGNEKIKK-GKIRGMESYGMLC 119 Query: 120 SEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 + +E+ SD + I P DA V G + L + D I+D +TPNR+D + + Sbjct: 120 ALQEIGFSDSTVPGKYVNGIYVFPEDAEVKPGDDVYQALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K + N+ E+ ++D+ L + + V GV+ +P Sbjct: 180 EGAAYEVGAIVNEKPQIENVVLKEDGPDWTSELDAEVDEK-LAPKYYLRKVSGVKIGDSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA S L VR+A GEK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKTFKSGKLVVRKAEKGEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +++E +L P++++I + +AG++GGK++ +++TTDV++E A++D + ++ Sbjct: 299 NDKEIELDPNDIIITDGDKPVMMAGVMGGKNSEVENDTTDVILESAVFDGTLVRKAALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 T++ RFE+G++ + L+ + T + I A + T KP + S Sbjct: 359 ANRTEASSRFEKGINWDNTQKAIDIAALLLRNDASATVNAGEIKATDQTRKPAVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G ++ ++ ++IL+RL F + D+ V+VP+ R D+ ADLVEE+ RIYG Sbjct: 419 YINNVLGTELSSDEMVKILDRLCFETQVDGDQLTVTVPNRRWDIAIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D +KS +PL E S +++ R VK+V+ + +ME +++S S E++V F Sbjct: 479 DNLKSTQPL---LAETHGGYSEAETKLRRVKKVVEGQGLMEAISYSLTSPEKAVRFTMNP 535 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 + L E+ P+++ S MR +L+ GL+ A N R D FE VY +NDT + Sbjct: 536 KPLAEVEMPLNSARSAMRQNLMTGLVDAASYNFARKENDLHFFEQGRVYDHDNDTFNEHE 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 ++A SG ++ D + + VD F K + E + LD + E A Sbjct: 596 HLATLY---------SGSIFEDNWQHKNEKVDFFYVKGQLEDLFEA-IGLDENKIEYKAA 645 Query: 646 --SWYHPGRSGIIKTSAEIVLGYFGEF-HP-NILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP R+ I + + G G H + D + + G+E+ LD+I + K Sbjct: 646 EINGMHPTRTAAIYLDGQYI-GMIGMIAHAVTMADKALRGSELYGYELDLDAIDATLNKG 704 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGE 760 +K + ++RDL+ +V + + + N+I N + + ++ V DV++G + Sbjct: 705 MTSKPAPKFPA---IERDLSILVKKDVTNSEIENVILANAGKYLKNLKVIDVYEGSHIEP 761 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + DT D+ + M++I E ++ +R Sbjct: 762 GKKSLAYNLTFLNEHDTLTDEVVTKAMNKITEALMNDLEVKIR 804 >gi|228473583|ref|ZP_04058335.1| phenylalanyl-tRNA synthetase, beta subunit [Capnocytophaga gingivalis ATCC 33624] gi|228274955|gb|EEK13765.1| phenylalanyl-tRNA synthetase, beta subunit [Capnocytophaga gingivalis ATCC 33624] Length = 808 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 249/837 (29%), Positives = 408/837 (48%), Gaps = 62/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +W+KD L D+ +++ + LT +GLEVE + + E+ L+ + +VL ++P Sbjct: 1 MKISYNWIKDFLKIDLPAQEVGEILTDLGLEVEGIYSYESVKGGLAGVVVGEVLECTKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D ++ ++D G+ + +VCGAPNV G A G+ + + + KIRG Sbjct: 61 NADKLSLTKVDLGEGGVVPIVCGAPNVAQGQKVAVATIGTTLYDKQGEPFKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L P G S+ + SD I ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGESHEGIMVLDSSLPNGKPCSEVFHIVSDTIFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A L + I P E+ L+I +D+ L + + V+ Sbjct: 181 LGVARDLRAGLLQRGTNKEIITPSVTDFFVENRLLKIDVLVDNKELAPRYCGVSISNVKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RL+A+G+ + +VD+TNYV D G P H FDA RIS + VR A GEK Sbjct: 241 APSPAWLQHRLRAIGVTPKNNIVDVTNYVLHDLGQPLHAFDALRISGKKIIVRNASEGEK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD + LS +++VI + +AG++GG ++G +TT + +E A ++P+ I ++ Sbjct: 301 FQTLDGVDRTLSAEDLVICDVDKPLCLAGVLGGNNSGVSQDTTHIFLESAYFNPVAIRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI- 404 K GI TD+ +RFERGV+ L +I L GG +SD+ I PRKI Sbjct: 361 AKRHGISTDASFRFERGVNADDCKYALLRAAIMIKKLAGGEISSDV-----IDLYPRKIE 415 Query: 405 ---VFMNSE-VKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKAD 458 VF+ E V L G +P + IL LG + I E ++VPS+R DV+ D Sbjct: 416 DFQVFLTYEKVDALVGQVIPRDVIKSILHSLGIQINSITEIG-MGLTVPSYRVDVQRDVD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++EEILR+YG + +++ P ++ N + + L + E++N S + Sbjct: 475 VIEEILRVYGYNNVEA-PSKVSASMAHANRYEDFNVQNIIADQLVGQGFFEIMNNSLTTA 533 Query: 519 EQSVLFGGGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + L Q + + +LNP+S D++ MR S+L L+ N +R D A+FE Y Sbjct: 534 QYETLSEDIQPAQRVTLLNPLSQDLAVMRQSMLFSGLETIAYNNNRKRTDLALFEFGKTY 593 Query: 577 EN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + K++A + SG + + + + K L++ F Sbjct: 594 HKVEQSYTEPKHLALFL---------SGNTYPETWNTPTEKTNFYQLKGYLLAI---FSR 641 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI----CGFEVY 690 L + ++ P+ + GI + L G +IL+ FG+ + +EV Sbjct: 642 LGIVDYQE-EPTTEGIFQEGITLKIGQQTLASLGIVRTSILNHFGIKQAVYYADVRWEVA 700 Query: 691 LDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDV 747 L+ + KKVV+ + V+RDLA ++D+ + + NI ++ L+ V Sbjct: 701 LEHL---------AKKVVYREIPKYPEVRRDLALLLDEDVSFRAIYNIAHKTEKELLKKV 751 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FDV+QG L +GKKS A+ L+Q T D I M+ ++ ++ A LRS Sbjct: 752 FLFDVYQGDKLPKGKKSYAVGFLLQDSNKTLTDKQIDKTMESLLAAFQQEVGAQLRS 808 >gi|325106479|ref|YP_004276133.1| phenylalanyl-tRNA synthetase beta subunit [Pedobacter saltans DSM 12145] gi|324975327|gb|ADY54311.1| phenylalanyl-tRNA synthetase beta subunit [Pedobacter saltans DSM 12145] Length = 799 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 243/839 (28%), Positives = 414/839 (49%), Gaps = 77/839 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK LD + + E+I LT+IGLEVE ++ +A L I V ++P Sbjct: 1 MKISYNWLKQFLDINSTPEEISKILTAIGLEVESLEKVQAVPGGLEGLVIGYVKEAIQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 + D + ++D G +++QVVCGAPNV G +G P + P +N KI Sbjct: 61 NADRLRVTKVDVGLGEDLQVVCGAPNVSAGQKVVVATVGTTVYPNTGEP---FKINKSKI 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDC 168 RG S GM+C+E E+ L + IM L DA +G ++ L+D + ++ LTPNR+D Sbjct: 118 RGEVSEGMICAEDEIGLGESHDGIMVLADDAKIGMPAKEFFNLNDDYLFEIGLTPNRADA 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A D+ A +K+ ++ ES I ++ D +L + ++ + G+ Sbjct: 178 ASHLGVARDIAAFLEIPVKKSDVEA-FKIESTVSPIVVEVADENLAQRYSGVSISGISVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++++L +G+RSI+ +VD+TNYV D G P H FDA I + + V+ A G Sbjct: 237 ESPQWLKEKLAVIGVRSINNVVDVTNYVLHDLGQPLHAFDAKEIIGNKVVVKTAEEGRSF 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD E L+ +++I + IAG+ GG ++G ++TTD+ +E A ++ +++ ++ Sbjct: 297 VTLDGVERKLTASDLIIYNAEEPMCIAGVFGGLNSGVKESTTDIFLESAYFNAVSVRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR----- 402 K G+ TDS +RFERG D + + LK LI + GGT S + + P+ Sbjct: 357 KRFGLKTDSSFRFERGTDPEITVYALKRAALLIQEVAGGTIS----SEIFDHYPKPVTDF 412 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVE 461 K+ + V RL G ++ E I+ LG ++ E D + +SVPS++ DV D++E Sbjct: 413 KVNLSINHVNRLIGQEIGEEKIKSIIRSLGIRILSENDGELSLSVPSYKVDVTRDVDVIE 472 Query: 462 EILRIYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 E+LRIYG D I + L T D+ S+QQ+ + +L++ E+++ S Sbjct: 473 EVLRIYGYDNIAIPNKVNASLNYTSKPDRE--SVQQT----ISDLLSANGFYEILSNSLT 526 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE---VS 573 +S ++ILNP+S+D+ MR S++ L+A N +R +D +E + Sbjct: 527 ---KSAYSKDLDHAVKILNPLSSDLDVMRQSMIFSGLEAVAYNSNRKNSDLKFYEFGKIY 583 Query: 574 HVYEN---DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSV 628 VYE+ +TPE ++ + + W+ + D + K+ D + Sbjct: 584 AVYEDKYVETPELAVFITGKANQAT---------WNSSAAH----TDFYSIKSVVDNILA 630 Query: 629 IEPFVSLDSLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 V+L+S ++ Y+ G+ ++K FG + L + P+ Sbjct: 631 RLNIVNLNSDELNDEDFAYGVKYNKGQKTLVK---------FGAVSGSALKQADVDKPV- 680 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLI 744 F D + R+ +S V+RDL+ ++D ++ L I +K L+ Sbjct: 681 -FAAVFDWNLVLTVIRSNKITYKEVSKFPAVRRDLSMLIDTNVTFEQLKRIAVKTEKNLL 739 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V VFDV+QG L GKKS A+ ++Q + T D I +M +I+ N+ K++ A +R Sbjct: 740 KAVDVFDVYQGDKLPAGKKSYALSFVLQDEEKTLADKQIDAVMQKIILNLEKESGAEIR 798 >gi|237733783|ref|ZP_04564264.1| phenylalanyl-tRNA synthetase beta subunit [Mollicutes bacterium D7] gi|229383121|gb|EEO33212.1| phenylalanyl-tRNA synthetase beta subunit [Coprobacillus sp. D7] Length = 803 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 226/805 (28%), Positives = 400/805 (49%), Gaps = 47/805 (5%) Query: 19 EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVC 77 +++ D +TSIGLEVE + + + TI V +PD D + +++ + Q+VC Sbjct: 27 KELADKITSIGLEVEGMHDLTRGNNMTIGYVKECMPHPDSDHLNVCQVEVRPGEIRQIVC 86 Query: 78 GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS------DDSA 131 GAPNV G + A PG C + ++ KIRG+ES GM+CS EL L +D Sbjct: 87 GAPNVATGQKVIVANPG-CDLGDGFVIKESKIRGVESNGMICSIAELGLDQRLLKPEDKD 145 Query: 132 SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINI 191 I L DAPVG +Y+ L D I+++ LTPNR+DC+ + +A + VAA LG+ E+N+ Sbjct: 146 GIHVLDTDAPVGAEPLEYMGLKDTILEIGLTPNRADCMAMTSLAYE-VAAILGR--EVNL 202 Query: 192 S--CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISAL 249 + +E + +K + D LC F VKGV +P W+R L A G++ I+ + Sbjct: 203 PEVSFIGAEGSGISVKVETD---LCPFFGAKLVKGVTTKESPEWLRNALIASGIKPINNI 259 Query: 250 VDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 VDI+N+V L+ G P H++D +++ + + K + LD +EY + P ++++++D Sbjct: 260 VDISNFVMLETGQPIHMYDYDKLNKKEFIIKTGFDCKEVMLDGEEYKIEPADLIVSTDAG 319 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG-VDLQG 368 I IAG++G D+NTT++++E A +D + + + L ++TD+ + +G ++ Sbjct: 320 IGCIAGVMGANSTKIDENTTNIVIEAATFDGATLRETARRLNLLTDASQHYIKGALNTAN 379 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 + +L+ +L++ L + ++ K + S+V + G + ++ I Sbjct: 380 SLMILERCANLLVELAEAKEVYQSVTTDLKIKDCFVRVTTSKVNGVLGTKITTDEIKDIF 439 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 L F + ++F V VP++R D+ ADL+EE+ R+YG D+I S ++ KR Sbjct: 440 SALKFEYTIDGEEFNVKVPTYRNDITLAADLIEEVARMYGYDKIPSTLPEMSMTVGKR-- 497 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMSNMRT 546 + Q++ ++ +L + + E + +S S F +++ P+ + S R Sbjct: 498 TDVQAKKHLIRNLLKDQGLHETLTYSLTSPVMVDDFNIFHTNESVKLAMPLGEERSVTRK 557 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWS 606 S++ LL+ N I D IFE+S Y + G+ + I G Sbjct: 558 SIIGSLLQVINYNQSHNIKDVNIFELSTTY-----------SKGVELQNLAIACCGEYNG 606 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE----SGAPSWYHPGRSGIIKTSAEI 662 ++ D + K ++ + ++ R++ S +YHPGR+ I E+ Sbjct: 607 LPFKQISYKADYYLVKGFVETIFKNL-GIEESRYKLVRASQDDKYYHPGRTAYIMIGKEV 665 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS-SLHP-VKRDL 720 V G G HP + + + +VY+ + ++ KT KV ++P V RD+ Sbjct: 666 V-GVVGNIHPLMEKKYNVK------DVYIVELNLTTLLNLKTSKVKFTEIPMYPSVSRDI 718 Query: 721 AFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A ++DQ IP + I++ +L+ + +FDV+ G+ + GKKSVAI +L Q K T Sbjct: 719 ALVMDQDIPTFDICRKIVQASKQLVKETKIFDVYAGEHIEAGKKSVAINLLFQDPKGTLE 778 Query: 780 DDDIRILMDRIVENVVKKTNAVLRS 804 + + M++I+ V K AVLR+ Sbjct: 779 EATVNAAMEKILAAVEKDFGAVLRA 803 >gi|38258643|sp|Q9AGR3|SYFB_STAAU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|13195456|gb|AAK15705.1|AF327741_1 phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus] Length = 800 Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 409/819 (49%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSDLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPETTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++ NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEVASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMAVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|15895623|ref|NP_348972.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium acetobutylicum ATCC 824] gi|30316272|sp|Q97GL0|SYFB_CLOAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15025367|gb|AAK80312.1|AE007736_2 Phenylalanyl-tRNA synthetase (beta subunit) [Clostridium acetobutylicum ATCC 824] gi|325509771|gb|ADZ21407.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium acetobutylicum EA 2018] Length = 792 Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 236/830 (28%), Positives = 420/830 (50%), Gaps = 65/830 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + WLKD++D D++ +++ D LT G +VE++ + + ++ K+L ++ +PD + Sbjct: 1 MKVPVKWLKDYVDFDINAKELGDRLTLSGSKVEEIITSGDEITNVVTGKILKIDPHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +D GK++ IQ+V GA N++ + A GS +P + + K+RG+ S GMM Sbjct: 61 KLVICSVDVGKNEPIQIVTGAQNMKENDIVPVALHGSTLP-GGVKIKKGKLRGVVSNGMM 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 C+++EL ++D+ +M L + P+G + + L L +P+ID +T NR DC+ V GIA Sbjct: 120 CAKEELGIADEEHVHGLMILDENTPIGKDIKEVLGLDNPVIDFEITSNRPDCLSVIGIAR 179 Query: 177 DLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A K + + I +I E++ ++ D LC+ + +K V+ +P WM+ Sbjct: 180 ETAATINTKYRNVKIDFSETKGRNIKEELEVEVKDK-LCRRYMARVIKNVKIEDSPAWMQ 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL G+R I+ +VDITN+V L+ G P H FD I S+ + + RA GEK LD++E Sbjct: 239 ERLMLAGVRPINNIVDITNFVMLEVGQPMHAFDKKMITSNKIVIERAKDGEKFTTLDSEE 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + ++I + +IAGI+GG + +NT +++ E A +D NI S + L + T Sbjct: 299 RSLDSNVLMIKDGDKNCAIAGIMGGLDSEVAENTHEIIFESANFDGTNIRVSSQKLALRT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKR 413 ++ R+E+ +D L +LI L G + I + +P + + + Sbjct: 359 EASGRYEKDLDPNLAEIALNRACTLIQELNAGEIVEGVIDIYPVKSEPNIVEVDYNWINN 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 GI + E+ L+RL + + DK EV P++R D+ K D+ EE+ RIYG +++ Sbjct: 419 FLGIKISKEEMKEYLDRLELTTEIKGDKLEVFSPTFRCDINIKEDVAEEVARIYGYNKVP 478 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------KEQSVLF 524 S + + ++ +QQ + V +L S + E +N+SF+S E S L Sbjct: 479 STTVKSQSIRTGKS-KIQQIKD-VVTDILISSGLNESINYSFVSPKIFDKILVPEDSEL- 535 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----END 579 + ++I NP+ D S MRT+ L ++++ RN +FE+ VY E + Sbjct: 536 ---RNVVKIRNPLGEDFSVMRTTTLHSMMESLARNYSHNNELAKLFEIGKVYIPSENEGE 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL 638 P+ + + G+ VD FD K +++E V+ S Sbjct: 593 IPKERNVITIGMYGN---------------------VDYFDLKGVVENLVEILGVNKISY 631 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD----SI 694 ES P+ +HPG++ +IK VLG GE HP++ + + + E+ LD ++ Sbjct: 632 ARESENPT-FHPGKTAVIKIK-NTVLGTLGEVHPDVCENYEVEERCYVAEIDLDLLLENV 689 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 +S+K + L V RD++ +VD+ I + N+IK +++ + +FDV+ Sbjct: 690 SLSRKYKA-------LPKFPTVTRDISVLVDEDILVQEIENVIKRQGGTILESLNLFDVY 742 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GK + +GKKSV+ + + T D D+ + +++++ + A LR Sbjct: 743 KGKQVPQGKKSVSYALTYRDENKTLTDKDVEKIQNKVIKTLEHVLGAELR 792 >gi|295395442|ref|ZP_06805641.1| phenylalanyl-tRNA synthetase beta subunit [Brevibacterium mcbrellneri ATCC 49030] gi|294971764|gb|EFG47640.1| phenylalanyl-tRNA synthetase beta subunit [Brevibacterium mcbrellneri ATCC 49030] Length = 852 Score = 314 bits (804), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 250/865 (28%), Positives = 393/865 (45%), Gaps = 74/865 (8%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ +L WL D++D S ++ SIGLE E E P + +VLS+E+ Sbjct: 1 MRVSLEWLSDYVDLSASPDAHELAAQFASIGLEEEDFFGPEVTGPLVVARVLSLEKEKHS 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + + +D G+ + +VCGA N G L V PG+ +P N + RK G S Sbjct: 61 NGKTINWCSVDVGEDEPRGIVCGAHNFVEGDLVVACLPGAVLP-GNFEIAARKTYGHVSD 119 Query: 116 GMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM+CS +EL L +D I+ +L + G L L +DV++TP+R + +R Sbjct: 120 GMICSLRELGLGEDHDGIIVLKDLGLTGEPGDDAIKLLGLDHTTLDVNVTPDRGYQLSMR 179 Query: 173 GIALD---LVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RN 227 GIA + L I++ P L + LE + C F V G+ Sbjct: 180 GIAREYALLKNQTFNDPANIDVPAPSLDGYRVDLEDTAPIHGQHGCSRFTAMRVDGIDAQ 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P WM++RL G+R +S +VDITNYV L+ G P H +DA ++ +TVRRA +GEK+ Sbjct: 240 GSSPYWMQKRLLEAGMRPLSLVVDITNYVMLELGQPLHAYDADKLGSKITVRRARAGEKL 299 Query: 288 LALDNQEYDLSPDNVVIASD-------------------GRIQSIAGIIGGKHAGCDDNT 328 LD+ E L P++++I + R+ +AG++GG+ + T Sbjct: 300 TTLDDVERKLHPEDLLITDNYAGTPAGDPEQDFNEAHYGQRVIGLAGVMGGEATEVSETT 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT- 387 T V++E A +D + IAR+ + + +++ RFERGVD LI L GGT Sbjct: 360 TSVIIEAAHFDKVTIARTARRHKLPSEAARRFERGVDPHLGPAAAMRCAQLIHELAGGTI 419 Query: 388 ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD---KFEV 444 A ++ + ++ +P I + + G+D E L +G V D V Sbjct: 420 APEMTVVGSVP-EPTVIPLLADAAAKRVGVDYTSEQVENALTAVGCKVDHAVDGQSTLAV 478 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +VPSWR D+ DL+EEI R+ G DQI P Q L+ +Q R V +LA Sbjct: 479 TVPSWRPDLTGPEDLIEEIARVNGYDQI---PSVAPQAPGGSGLTHRQKALRTVSNLLAH 535 Query: 505 RAMMEVVNWSFISKEQS---VLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRN 559 + EV+ + F + +S +L R + + NP++ D +R+ LL L A +N Sbjct: 536 VGLTEVLTYPFTADTRSDALLLEADDPRRTMVRLANPMADDQPLLRSHLLATLPDAVNKN 595 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGS-GRLWSDKSEERCRFVDL 618 + R D +FE V + PE Q G E L S + + Sbjct: 596 LGRGFKDVFVFETGLVTQ---PEAQATATGTFAPGYHPTEEELATLRSAVPPQPLHAAAV 652 Query: 619 FDAKADALSV------IEPFVSLD-----------SLRFESGAPSWYHPGRSGIIKTSAE 661 K + L V +E ++D +L S + +HPGR T + Sbjct: 653 MTGKIERLGVWGKGRNVEATDAIDLVHRIAGVLGLTLDVRSSQTAPFHPGRCAEF-TLGD 711 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR-DL 720 V+G+ GE HP ++ GL C FEV LD + +R + S +PV R D+ Sbjct: 712 TVVGHAGELHPKAIENLGLPARTCAFEVDLDVLFAHSLERAWDGAL----STYPVSRQDV 767 Query: 721 AFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A IVD+ +PA L ++ ++D+ +FD++ G +GEGKKS+A ++ + T Sbjct: 768 ALIVDESVPAADLARALREGAGPELEDLDIFDLYTGDQVGEGKKSIAFRMTFRAADRTLT 827 Query: 780 DDDIRILMDRIVENVVKKTNAVLRS 804 D+ L + +N K +RS Sbjct: 828 ADEASALRVKATDNAHAKFGVEVRS 852 >gi|172036236|ref|YP_001802737.1| phenylalanyl-tRNA synthetase subunit beta [Cyanothece sp. ATCC 51142] gi|171697690|gb|ACB50671.1| phenylalanyl-tRNA synthetase beta subunit [Cyanothece sp. ATCC 51142] Length = 813 Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 240/849 (28%), Positives = 430/849 (50%), Gaps = 81/849 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +++WL++ ++ ++ E + D LT GLEV+++++R + ++ K++ + +P+ D Sbjct: 1 MKISVNWLRELVNVTLTPEALADLLTIAGLEVDEIEDRRQWADGVVIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ +VCGAPN + + A G+ +P+ ++ + K+RG++S GM+ Sbjct: 61 KLSVCQVDIGEENPSTIVCGAPNAKADIYVPVATLGTYLPKIDLKIKSAKLRGVKSQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I D +G YL L D I+D++ T NR+D + + G+A + Sbjct: 121 CSLAEVGLTKESAGIHIFEEDNLELGADARPYLGLDDVILDITPTANRADAMSMIGVARE 180 Query: 178 LVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + A GKL N+ P + ++ PL + ++ D + C + ++GV+ +P+ Sbjct: 181 VAALTGGKL---NLPQPPHTSFSGEQTYPLTV--EVSDGNACPTYIGTVIEGVKIAPSPD 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--------LTVRRACSG 284 W++QRL+ G+R I+ +VDITN V L+ G P H FD ++ V + VR A Sbjct: 236 WLQQRLEVAGVRPINNVVDITNLVLLEWGQPLHAFDLQKLETVARNKDHLIVGVRFAQEK 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + LD Q L+P N++I ++ + ++AG++GG+ D TT++L+E AL++ + I Sbjct: 296 ETLKTLDGQARKLNPVNLLITANDQPVALAGVMGGEETEVADGTTNILLEAALFEQVTIR 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKP-R 402 RS ++ + +++ R+ERG++ + + ++LI L GGT + + I+ ++P R Sbjct: 356 RSSRSQSLRSEASARYERGINYSELELACQRAIALITELAGGTP----VTQQISDHRPDR 411 Query: 403 KIVFMNSEVKRLSGIDVPIE-----------DSLRILERLG---FSVIGEYDKFEVSVPS 448 + + R+ + P+E D RIL LG + GE + V+VPS Sbjct: 412 SAESIELRLDRIHHVLGPVEKDGQTTNIAAVDVERILSDLGCRLTPIAGENTVWSVTVPS 471 Query: 449 WR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 +R +D+E + DL+EE+ R+YG D+ E L + LSL+ R V+ V + Sbjct: 472 YRYRDLEREIDLIEEVARLYGYDRFCDE---LPDKTEAGGLSLEYQTQRRVREVFRGVGL 528 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 E+V +S + E++ ++ I NP+ A+ S +RT+LL G++ A N + Sbjct: 529 TELVQYSLVKPEKA--------DIVISNPLFAEYSALRTNLLDGIIDAFAYNQSQGNGAL 580 Query: 568 AIFEVSHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 FE+ ++ E ++ AGI G +G W+ KAD + Sbjct: 581 NGFEIGRIFRRINGEIAEWDNIAGIMGGDLLPQGR---WTRS------------GKADPM 625 Query: 627 SVIEPFVSLDSLRFESGAPSWY---------HPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 + E L+S+ G Y HPGR+ + E LG FG+ HP + Sbjct: 626 TWYEAKGILESVFERLGISVEYQPDSQDERLHPGRTASLWLYGE-RLGMFGQIHPQLRQE 684 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNI 736 L N + GFE+ + + L S +P V+RDLAF I L Sbjct: 685 KDLINEVYGFELDFRCLSKVLNQENLLNPHFELYSTYPAVERDLAFFAALDISVADLTKT 744 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + K +L+ V +FD +QGK++ +G++S+A + + T D+D+ + D+I + +V Sbjct: 745 MNKAGGKLLTAVELFDDYQGKNVPDGQRSLAFSLAYRSGDRTLTDEDVEPVHDQIRQMLV 804 Query: 796 KKTNAVLRS 804 K+ + LRS Sbjct: 805 KEFDVTLRS 813 >gi|227530496|ref|ZP_03960545.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus vaginalis ATCC 49540] gi|227349601|gb|EEJ39892.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus vaginalis ATCC 49540] Length = 805 Score = 313 bits (803), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 227/823 (27%), Positives = 406/823 (49%), Gaps = 38/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WL ++LD DV + + + +++ V + + L + +V + E +PD D Sbjct: 1 MKVSYDWLNEYLDLDVEPRDLAEKIARTSVDINDVYSLSDGLKKLVVGEVETCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + +Q+VCGAPNV G + A G+ I NN + KIRG+ES GM+ Sbjct: 61 HLHVCSVNVGEEEPLQIVCGAPNVAAGQKVIVALNGARIA-NNQKIKRGKIRGVESNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ SD A I LP DA G + YL + D IID +TPNR D + + Sbjct: 120 CALQEIGFSDRIAPKAYEDGIYILPDDAKPGESVFSYLGMDDTIIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A K KE+ + + L I ++ D + + + +KGV+ + Sbjct: 180 GNVNDIAAFYNLKPHFKEVAVEENDDQATADL-INAEISDKKIAPTYKLRVIKGVKIEDS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ RL G+R I+ +VD+TNYV L G P H +D ++ S ++VR A + EK + Sbjct: 239 PLWLQIRLWNSGIRPINNVVDVTNYVLLKYGQPLHSYDYDKLPSHDISVRHARADEKFVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD++E L+ +++V+ S + ++AG +GG+ +NTT V +E A++D + + + + Sbjct: 299 LDDEEQTLNANDIVVVSGDQPVALAGTMGGQATAVSENTTTVALEAAIFDSVMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMN 408 L + ++S RFERG++ + L LI L GGT + I + + I Sbjct: 359 LDLHSESSMRFERGINPATVETALNEAAQLISQLAGGTVTKGIVTGSEKPAESKDIELSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +++ + G ++ +ED + ++L F + + D V+VP+ R D+ ADL EE+ RIY Sbjct: 419 TKINHVLGTNLKMEDVTSVFDQLAFPNKLTSNDTVLVTVPARRWDISLPADLYEEVARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF--G 525 G D + E LP+ + LS +Q R + + + +++S + +++ F Sbjct: 479 GYDNL-PESLPV-MTRNHGGLSPRQRFIRATRHDFEGMGLNQAISYSLTTVDKAKQFQID 536 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 +++ P+S+D R S++ GLL NV R + + A++E V+ + PE Sbjct: 537 PVAEPMKLDFPMSSDHVATRMSIISGLLIDIAYNVARNVNNVALYEEGRVFIPRGGERPE 596 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-E 641 Q+++A I +G+L ++ + VD F K + + + Sbjct: 597 EQEHVAGAI---------TGQLLNNSWHITDQPVDFFQVKGMVERYLHNMGIAGKIEYVA 647 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ I E+V G+ G+ HP + + FE+ L+ + K + Sbjct: 648 DHSREEMHPGRTANILIDGELV-GFVGQVHPQTAKEYKVPETYV-FELNLEQL---MKAK 702 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 + +S + RD+A +VD ++ +V++IK + DV +FDV+ G L Sbjct: 703 KIENEYTPISKFPTITRDIALLVDTNVTNEEIVDLIKKRGGAFLKDVHLFDVYSGAHLSS 762 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q T +D + D++ +++ ++ NA +R Sbjct: 763 GKKSLAYTLTYQDTNATLTEDQVNQAFDKVTKHLQEQLNAEIR 805 >gi|218960861|ref|YP_001740636.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] gi|167729518|emb|CAO80429.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Cloacamonas acidaminovorans] Length = 841 Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 251/860 (29%), Positives = 417/860 (48%), Gaps = 94/860 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTI--VKVLSVERNPDL 58 MK LSWL +++ + +++ + LT G+EVE V+N AL P T+ K++S E P+ Sbjct: 1 MKIALSWLAKYIEIKENTKELEEILTFSGIEVEAVENIPAL-PETVFSAKIISAEPVPET 59 Query: 59 D----CAILRIDTGKHQ--------EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 D C + D G +QV+CGAPN R G++ V A PGS +PE M + Sbjct: 60 DHLKRCLV---DIGNFPCPEKTEDGYLQVICGAPNCRTGMMAVIALPGSVLPE--MTIAK 114 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 I+GI+S GM+CSEKEL +SD+ + I+EL + P+G ++ EL D I ++ +TPNR Sbjct: 115 AHIKGIDSCGMLCSEKELGISDNHSGIIELSTETPIGITANELYELPDTIFELEITPNRP 174 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 D +G GIA DL A LK I P +E++PLE+ + + LC + Sbjct: 175 DLLGYIGIARDLSAKLNRSLKMPEIKIPEAKCKAETMPLELVNKVPE--LCPRYIARLFN 232 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------- 275 V +P W++ L GLR I+ LVDITNYV L+ G+P H FD +++ + Sbjct: 233 KVELKESPLWLKSALIKSGLRPINNLVDITNYVMLEYGHPLHCFDYDKLAALPEKPGIPA 292 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + +RRA E I+ LD + Y L + +VIA + +IAG++GG + + T +++E Sbjct: 293 IVIRRAYQNEPIITLDGKSYLLEGEEMVIADGIKPSAIAGVMGGNISAISETTKRIVLES 352 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A ++P +I R+ I TDS YRFER + LI L ++ Sbjct: 353 AAFNPSSIRRTSYKHKISTDSSYRFERHLSEYSAEDASIRATQLICELANAELCEVTYD- 411 Query: 396 NITYKPRKIVF--MNSEVKRLSGIDVPIEDSLRILERLGFSV-------------IGEYD 440 + + P+ ++ + ++ G ++ E LERLG I E + Sbjct: 412 SFPFPPKPLILGIRSDRYTQVIGYELEDEKIRDYLERLGLKFLQYGTWKPGKINDIAEIE 471 Query: 441 KFE------------VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 + +P R D+E + D++EEI R+ G D+I + LP ++ D+ + Sbjct: 472 SYSSENKQKSIKAQYYEIPHCRVDLEREIDIIEEIARLDGYDKIPVKTLP-QRIMDRHSY 530 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEIL---NPISADMSN 543 ++++ Y L SR E +N+SF + G G RELE++ NP S++ S Sbjct: 531 RIKKNAVDY----LVSRGFYETLNYSFSEPDLLYKLGYEDGDRELEMITLKNPQSSNQSA 586 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYMAAGIRKGSSGIEGSG 602 MRTSL+P LL+ N++R + +FE+ Y + + Y AGI G + E Sbjct: 587 MRTSLIPQLLQNLAYNLNRGEKNIKLFELGKTYHRQEALSYEPYFLAGIVTGLNKEEH-- 644 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR----FESGAPSWYHPGRSGIIKT 658 W DK+ + LF K ++E +SL L E+ P + Sbjct: 645 --WQDKASP----ITLFWVKG----IVEELLSLWHLENWSVQETKVPFLSRTESASYYLE 694 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP---ISQKKRTKTKKVVHLSSLHP 715 + E L Y+G+ + + + F + ++++ I RT + Sbjct: 695 NKE--LAYYGKLNSIVAEKFDIDTIELKQDIWIVQFAMENIINATRTLKTHFQEIPRFPF 752 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RD++F++ + IP ++ I ++R +I +VT FD ++GK + EGK+S+ +++ + Sbjct: 753 VTRDISFLIAEEIPYSEIIKTIAEIERNIISEVTAFDEYRGKQIPEGKRSLTLRLKFRDK 812 Query: 775 KDTFRDDDIRILMDRIVENV 794 + T D+ + L+D I++ + Sbjct: 813 EKTLTDERVDYLIDLIIKKL 832 >gi|262091751|gb|ACY25340.1| phenylalanyl-tRNA synthetase beta subunit [uncultured actinobacterium] Length = 785 Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust. Identities = 250/823 (30%), Positives = 408/823 (49%), Gaps = 59/823 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL- 58 MK SWL + D ++ I D +T +GL VE VD + KVL +E++PD Sbjct: 1 MKILHSWLNEFADFGNDVDAIADRITELGLAVESVDRVGTPVKGVVTAKVLRLEKHPDAA 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G E V CGA N++ G + A G+ +P+ +I R I GI+S GM+ Sbjct: 61 KVTRVYVDAGDGVERHVWCGATNMQAGDIVPLATLGTNMPDGRVITQ-RGILGIDSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ LS D + ++ LP +G + + L + SD + D+ +T NR DC G G+A D Sbjct: 120 CSGTEIGLSSDGSGLLILPQGTALGLDVYEALGVDSDVVFDLDVTRNRPDCTGYLGVARD 179 Query: 178 LVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 L AAGLGK L +++ + S ++P+ I C F + + G+ +P+W+ Sbjct: 180 L-AAGLGKQLVLPKVDQTATGQSLTVPVAIAA----PDRCSRFTVQVMSGISITQSPDWI 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL G+RSI+ +VD++N V+L+ P+H +D + D VR A GE+ LD E Sbjct: 235 ARRLARAGMRSINNVVDVSNLVNLELNQPNHAYDFDSVKDGFNVRLAREGEQFTTLDAVE 294 Query: 295 YDLSPDNVVI--ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 LS D+++I A D + IAGI+GG + D TT + VE+A ++P + + L + Sbjct: 295 RTLSGDDLLICNAQDKPV-GIAGIMGGLDSEVTDTTTSIAVEIAYFEPDAVRATSTRLAL 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARN--ITYKPRKIVFMN 408 T++ RFERGVD G L+ C S AR + + R Sbjct: 354 RTEASLRFERGVDPFGAEFAAARFAELLRITCPNLVVHSGATDARTDALPQQARTTEVRL 413 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEY---DKFEVSVPSWRQDVEEKADLVEEILR 465 + +KR+ GIDV + ++ +GF+ IG+ V +PSWR D + D+VEE+ R Sbjct: 414 NTIKRVLGIDVTAQALEDLIAPIGFT-IGKSATDGSVVVGIPSWRNDCNSEIDIVEEVAR 472 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG + + +P + V + LS Q R R ++ ++ S E + F++ G Sbjct: 473 HYGYANL-GKIVPTSPVHGR--LSDVQRRRRILREIVVSLGASEAMPNPFLAPGDLAKVG 529 Query: 526 GGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + L++ NP+ A+ S +RTSL+PG+LK+ N I D ++FE+ HVY P+G Sbjct: 530 LSEDNALKLANPLVAEESVLRTSLVPGMLKSIAYNQSHRIRDISLFEIGHVY----PQGT 585 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFES 642 + + D+ E C V DA D S + + + + + Sbjct: 586 EIL------------------PDEFESLCIMVAGADASVAMDLWSQVSSSLGVGAQLAQD 627 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 P+ YH RS +K ++VLG GE P +L G+ + EV L S+ +S+ + Sbjct: 628 QPPAGYHATRSAQLK-RGKMVLGSVGEIDPTVLANAGIVGRVACLEVNL-SVVLSEVPKP 685 Query: 703 KTKKVVHLSSLHPVKR-DLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 ++ +VV S +P DLAF+V + A TLV ++ L+ D+ +FDV++GK + + Sbjct: 686 QSAQVV---SKYPSSDFDLAFVVTNSVSAATLVKALRQAGGNLLIDLALFDVYRGKGVSD 742 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +S+A ++ +Q T D ++ + + + +K A LR Sbjct: 743 DSRSLAYRLRLQAPDRTLTDVEVSDVRAKCIA-AAEKLGAALR 784 >gi|269795531|ref|YP_003314986.1| phenylalanyl-tRNA synthetase subunit beta [Sanguibacter keddieii DSM 10542] gi|269097716|gb|ACZ22152.1| phenylalanyl-tRNA synthetase beta subunit [Sanguibacter keddieii DSM 10542] Length = 854 Score = 313 bits (802), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 265/853 (31%), Positives = 414/853 (48%), Gaps = 101/853 (11%) Query: 5 LSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 L+WL +H++ L E++ L +GLE E+V P +V+VLS+ + P + + Sbjct: 6 LTWLGEHVELPAGLTAEQLAVDLVRVGLEEEEVHGAAVTGPLVVVRVLSLVKEPQKNGKV 65 Query: 63 L---RIDTGKHQEIQ----------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + ++D G H + +VCGA N G L V A PG+ +P + RK Sbjct: 66 INWCQVDAGAHNTLDDDGRPTVPRGIVCGAHNFVEGDLVVAALPGTVLP-GPFPIAARKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD----YLELSDPIIDVSLTPNR 165 G S GM+CS EL L + I+ L G D L L + ++++++TP+R Sbjct: 125 YGHVSDGMICSTSELGLGEGGDGIIVLDPAVHAGVEPGDDAIALLGLGEEVLEINVTPDR 184 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIP------LEIKFDLDDSSL-----C 214 C +RG+A + + + + L S S+P E+ + DD+ + C Sbjct: 185 GYCFSMRGVAREYSHSTGARFTDPG----LPSGSLPGATADGFEVVVE-DDAPVHGVAGC 239 Query: 215 KGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 F V+GV + A P WM++RL G+R IS VD TNYV LD G P H +D S + Sbjct: 240 DRFVTRVVRGVDASAASPAWMQRRLTQAGMRPISLAVDATNYVMLDLGQPLHAYDLSTLV 299 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GRIQSIAGIIGGKHAGCDDNT 328 + VRRA +GE+++ LD + L +++I R+ +AG++GG +T Sbjct: 300 APVVVRRATTGERLVTLDGTDRALDTGDLLITDSAGGRGARVLGLAGVMGGAETEVSYST 359 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 TDVLVE A +DPI++AR+ + + +++ RFERGVD + + +V L++ GGTA Sbjct: 360 TDVLVEAAHFDPISVARTARRHRLPSEAAKRFERGVDPRLAAVAAQRVVDLLVEHGGGTA 419 Query: 389 SDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVS 445 D ++ R +V M +E RL G+D + + LE++G +V+ G V+ Sbjct: 420 -DPAVSDLDAVPERPVVEMALTEPARLVGVDYTRDQVVGTLEQIGCTVVEQGATGTLLVT 478 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 VP+WR D+ A+LVEE+ R+ G DQI S LP+ L+ Q R V R LA Sbjct: 479 VPTWRPDLTGAAELVEEVARLVGYDQIPSV-LPVAPA--GSGLTRGQRARRSVARGLAEH 535 Query: 506 AMMEVVNWSFISKEQSVLFG---GGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNV 560 + EV+++ F+ + Q G +R L ++NPISA+ MR+SLL LL RNV Sbjct: 536 GLAEVLSYPFVGQAQLDELGLPADDERRTMLSLVNPISAEKGQMRSSLLVTLLDTARRNV 595 Query: 561 DRAIADFAIFEVSHVY-------------------------ENDTPEGQKYMAAGIRKGS 595 R +D A+FE+ V Q AG+ GS Sbjct: 596 ARGRSDLALFELGLVTLPVAGAPAAPALPVGQRPSDEQLAAVAAAVPAQPRHVAGVLAGS 655 Query: 596 ---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 G G+GR W+D V L +A A E VS S R AP +HP Sbjct: 656 LELPGWWGTGRAADWTDA----LAAVRLVAERAGA----EIVVSSTSDR----AP--WHP 701 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GR ++ + V+G+ GE HP +++ L FEV LD+ + T+ ++ + Sbjct: 702 GRCAEVRLTDGTVVGHAGELHPKVVEQLALPARTVAFEVDLDA--LVSAAPTEPRQAGLV 759 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S+ K DLA +VD +PA + + +++ L++D+ +FDVF G+ +GEGKKS+A + Sbjct: 760 STFPLAKEDLALVVDAGVPAQDVFDAVRDGAGDLLEDLRLFDVFTGEQVGEGKKSLAFSL 819 Query: 770 LIQPLKDTFRDDD 782 ++ T D Sbjct: 820 RLRAQDRTLTAQD 832 >gi|288924103|ref|ZP_06418154.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] gi|288344548|gb|EFC79026.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia sp. EUN1f] Length = 856 Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 242/786 (30%), Positives = 373/786 (47%), Gaps = 71/786 (9%) Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM 134 V+CGA N VG A PGS +P ++ RK G S GM+CS +EL L DD + I+ Sbjct: 86 VICGAFNFEVGDRVPVALPGSVLP-GGFEISSRKTYGHVSDGMICSARELGLGDDHSGIL 144 Query: 135 ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP 194 LP D P+G +++ L +SD ++D+++TP+R + VRGIA + A + Sbjct: 145 VLPPDTPIGAHVAELLAVSDEVLDIAVTPDRGYGLSVRGIARETATAFGLPFGDPGQWGG 204 Query: 195 LSSESIPLE-------------IKFDLDDSSLCKGFAMCCVKGVRNNV-AP-NWMRQRLK 239 L+S++ PL ++D++ C + V GV P W R RL Sbjct: 205 LASDAGPLPGGTGDGGEAGAAGYPVRVEDTAACDRYVARVVSGVDPTARTPLGWAR-RLS 263 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 G+R ISA VD+TN V L G P H FD +++S + VRRA +GE++L LD + L P Sbjct: 264 LAGMRPISAPVDVTNIVMLGLGQPLHAFDRAKLSGPIVVRRARAGERLLTLDGVDRVLDP 323 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +++VIA D ++AG++GG TTD+++E A +D I +AR+ + + +++ R Sbjct: 324 EDLVIADDSGPIALAGVMGGAATEISATTTDIVLESAHFDAIVVARTARRHRLGSEASRR 383 Query: 360 FERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 FERGVD + PV + V L+ L G +A + P I F E +RL+G Sbjct: 384 FERGVD-PALAPVAAQRAVDLLGELAGASAEPGGTDVDHRPAPVTITFPLGEPERLAGRP 442 Query: 419 VPIEDSLRILERLGFSV-----------IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 P++ + L +G V EV+VPSWR D+ ADLVEE++R+ Sbjct: 443 YPLDVIRQRLADIGAVVSDPASVAGASGAAASGTVEVTVPSWRPDLARPADLVEEVVRLE 502 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS---VLF 524 G D I P+ L + R L+ Q R V R LA+ +EV+ F+ + S L Sbjct: 503 GYDTI---PVTLPLLPAGRGLTEAQRLRRAVGRALAADGFVEVLTLPFVGADASDVLSLP 559 Query: 525 GGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-- 580 G R + + NPI+ D S +RT+LL GL+ A GRN+ R D A+FE V+ Sbjct: 560 DGDPRRAAVRVTNPIAQDASYLRTTLLSGLIDAAGRNLGRGQTDLALFESGLVFREPAGG 619 Query: 581 -------PEGQKYMAAGIRKGSS--------------GIEGSGRLWSDKSEERCRFVDLF 619 P ++ A IR S G+ W R D Sbjct: 620 AVAVATPPVDRRPSEAEIRALDSALPDQPRHVAVILTGLREPAGWWGPG-----RAADWG 674 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 DA A A SV V ++ L +G +HPGR + +V G+ GE HP +L G Sbjct: 675 DAVAGAHSVAA-AVGVE-LTVSTGDVLPWHPGRCAELSVDGRVV-GHAGELHPRVLGAAG 731 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK- 738 L C E+ LD++ I+ +S+ P RD+A + + + ++ Sbjct: 732 LPARSCAMELDLDAL-IAVALERPAVAAPAISTFPPADRDVALVTGAEVSVAAVTEALRA 790 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 L++ +++FDV++G +G G++S+A + ++ T + + D V +T Sbjct: 791 GAGELLESLSLFDVYEGGQVGPGRRSLAFGLRLRAADRTLTAGEANDIRDAAVAEAASRT 850 Query: 799 NAVLRS 804 AVLR Sbjct: 851 GAVLRG 856 >gi|220903762|ref|YP_002479074.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868061|gb|ACL48396.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 801 Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 226/817 (27%), Positives = 404/817 (49%), Gaps = 45/817 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +LSWL++ + + E + D LT +GLE+E + +A+ + V++ E +P D Sbjct: 1 MLLSLSWLREFTPYEGTAEALGDRLTMLGLELEDIRRPFDAIGSIVVGLVVACEDHPQSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + + +VCGAPNV G A G+ +P + +++ K+RG S GM+ Sbjct: 61 HLHVCKVDAGQGELLDIVCGAPNVAEGQKVPVALVGTTMP-DGLVIKKAKLRGAPSFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L++D A IM LP VG L D L L ++D+S+TPNR+DC+ V G+A + Sbjct: 120 CSERELGLTEDHAGIMVLPDSFEVGKPLVDQLVLDRELLDISVTPNRADCLSVLGLAREA 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLE---------IKFDLDDSSLCKGFAMCCVKGVRNNV 229 A S PL+ +PL+ I D++D LC+ ++ + G + Sbjct: 180 ALA---------FSLPLNIPGLPLQVDESAPQRLIPIDIEDPDLCRLYSGRVITGAKIGP 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P +R RL A+G+R +S +VD+TNY+ L+ G P H FD ++ + V RA GEKI Sbjct: 231 SPMQVRHRLHAMGVRPVSNIVDVTNYILLEYGQPLHSFDLDKLEGGRIVVSRAKDGEKIT 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+P ++ I R ++AG++GG + +++V +E A++ P I ++ + Sbjct: 291 TLDGQERILTPQDLCIRDASRAVALAGVMGGLNTEITAESSNVFLESAVFLPAAIRKTSR 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFM 407 LG+ ++S YRFERG+D Q + L +++ +L GGT + ++ +K I F Sbjct: 351 RLGLSSESSYRFERGIDQQRTVWALDRACAMMAALSGGTVQPGLSVSEPRPFKAASIDFR 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G+ + E +L +G +V D + V PSWR D+ +ADL+EE+ R++ Sbjct: 411 PARANALLGVKLAPEFDQAVLTGMGCTVDASTDVWRVGQPSWRPDLTREADLIEEVGRVH 470 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLF 524 G+D I E P+ + D + +SR + +K A + E VN+SF+ + Sbjct: 471 GLDTIAPELPPVCR--DLAHAGEPESRFAFWLRLKHWGAGLGLNEAVNYSFVGHKDLDHL 528 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G + + I+NP+SA+ +RT+L PGLL N+ + FE++H +E D Sbjct: 529 GLPREGRISIMNPLSAEQDALRTALAPGLLHDLRNNLAQGAQGLRFFELAHTFEADAASE 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 G+ G+ G + + +D D K ++E + L Sbjct: 589 TTARETGML----GVLLYGSRFDTAWPQAEGDMDYMDLKG----IVENLMRFLHLPAPVC 640 Query: 644 APSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HP ++ + + G G P + D F + E+ L+ + + Sbjct: 641 TLAAEHPFLLPCVEVAVDGRAAGVMGRVKPAMADEFHARKDVWLAELNLEI--LRELHDA 698 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEG 761 + L PV+RD+ + + ++ ++ + L++D+ + D F+ K EG Sbjct: 699 AQVRFRPLPVYPPVRRDITVMAGPGLTVSAVMAHVRGLALPLLEDLVLVDCFEPKP-AEG 757 Query: 762 KKSV---AIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 +++V ++ + T +D ++ +++ +++V Sbjct: 758 QEAVRNLTFRLTFRHADRTLKDAEVDKEREKVAQSLV 794 >gi|1518404|emb|CAA64071.1| phenylalanyl-tRNA synthetase [Synechococcus elongatus PCC 7942] Length = 808 Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 232/841 (27%), Positives = 427/841 (50%), Gaps = 70/841 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ + D+ E + + LT G EVE++++R + +V +VL E++P+ D Sbjct: 1 MRISLNWLRELVQVDLEPEVLAEKLTLAGFEVEEIEDRRTWAAGVVVGRVLEREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G+ + + +VCGA NVR + A GS +P ++ + K+RG+ S GM+ Sbjct: 61 RLSVCQVEIGQAEPVTIVCGASNVRADIWVAVATLGSYLPCIDLKLKPTKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CS EL L+ +S I P DA G + L L D ++D++ T NR+D + + GIA Sbjct: 121 CSLSELGLTKESEGIHIFPEDAGLQAGQPVGPLLGLDDVVLDLTSTANRADALSLIGIAR 180 Query: 177 D---LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + L AA L L E+ + LS ++ + + S G ++GV +P W Sbjct: 181 EVRALTAATL-TLPEVG-TADLSRTTLSWRSLYKVKPGSHYSG---TIIEGVTIAPSPEW 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEK 286 +++RL+ G+R+I+ +VDITNY+ L+ G P H FD ++ + + VR A +GE Sbjct: 236 LQKRLQLAGIRTINNVVDITNYILLEYGQPLHAFDRQKLQAIAGSSDLAIGVRSAQAGET 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+QE L+ +VI + ++AG++GG + TT +L+E A ++PI + RS Sbjct: 296 LKTLDDQERTLAEAALVITAGDCPVALAGVMGGADSEVSQETTQLLLEPAWFEPIAVRRS 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ G+ T++ R+ERGV++ + + + L+L + GGT +A +P + Sbjct: 356 ARSQGLRTEASARYERGVNVTELPIATQRAIDLLLQIAGGTVISQTVATTTQTEPEHSIT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLG-------FSVIGEY------DKFEVSVPSWR-QD 452 + ++R++ + P++ L+ LG + IG + ++V VP +R +D Sbjct: 416 LR--LQRINELLGPVQAEDEELKDLGADDIERLLTAIGCHLTLVDDAVWQVRVPPYRYRD 473 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E + DL+EE+ R+YG D PL D+ LS+ +S R ++ V + E+ + Sbjct: 474 LEREIDLIEEVARLYGYDNFGETLPPLGS--DEGALSIDESLRRQIRAVCRGVGLTELQH 531 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + G R++ + NP+ A+ S +R LL GL+ A N ++ FE+ Sbjct: 532 YSLVKP-------GSDRQVHLANPLLAEYSALRLDLLSGLIDAFQYNWEQGNGPLWGFEI 584 Query: 573 SHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 ++ E+ E + + +G W +E+ +D + AK + Sbjct: 585 GRIFWREEDGFFEADRILGGDPSRGR---------WQRGGKEQA--IDWYAAKGVLEEIF 633 Query: 630 EPFVSLDSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 E F ++ F+ +HPGR+ + + LG FG+ HP++ + GL + FE Sbjct: 634 ERFGL--TIEFQPDRQDDRFHPGRTASLWLQGD-RLGRFGQLHPSLCEGRGLPAEVYAFE 690 Query: 689 ----VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRL 743 V+LD + Q +R + + SS RDLAF VDQ + L II+ L Sbjct: 691 LDLDVWLDH--LDQPER-QVPRFQPYSSFPASDRDLAFFVDQSVTVAELERIIRRQGGAL 747 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +V +FD + G+ + E ++S+A ++ + T + ++ + D++ +++V++ LR Sbjct: 748 LSEVELFDQYCGEHVPENQRSLAFRLTYRASDRTLTEAEVEPVHDQVRQSLVERFRVTLR 807 Query: 804 S 804 S Sbjct: 808 S 808 >gi|331004349|ref|ZP_08327823.1| phenylalanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411153|gb|EGG90570.1| phenylalanyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167] Length = 806 Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 252/847 (29%), Positives = 416/847 (49%), Gaps = 84/847 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ + D +T G +VE + L + ++LS+E++PD Sbjct: 1 MDTALSWIKAYVPDLDVTPSEYTDAMTLTGTKVEGYKELDKNLEKIVVGEILSIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G ++ IQ+V GAPNV VG L G GS +PEN + + K Sbjct: 61 DKLIICQVDIG-NETIQIVTGAPNVSVGDKVPVVLDGGKVAGGHDGSPLPENGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS EL + I LP D+ VG + L L D + + +T Sbjct: 120 LRGVESFGMMCSIDELGQDKNYFPDAPENGIYILPKDSKVGSDAIELLGLRDVVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC GV GIA + A L ++ ++E++ + ++ DS+LCK + V Sbjct: 180 SNRVDCYGVIGIAREAAATFKKNLVLTQVNATGNNENVNDYLTVEVKDSALCKRYVARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 K ++ +P WM++RL+AVG+R I+ +VDITNYV + G P H FD + I + V RA Sbjct: 240 KNIKLAPSPAWMQERLRAVGIRPINNIVDITNYVMAEYGQPMHAFDYNLIEGKKIVVDRA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G++ LD L D ++I + +IAGI+GG+++ D+ + ++ E A +D Sbjct: 300 KDGDEFETLDGIVRKLDSDTLMINDAKKAVAIAGIMGGENSKITDDVSTMIFECATFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-----CGGTASDICIARN 396 NI S K +G+ TDS +FE+G+D + SL+ L GGT D+ + Sbjct: 360 NIRLSSKRIGLRTDSSGKFEKGLDPNNAYDAMMRACSLVEELGAGEVVGGTV-DVYPVKA 418 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVE 454 + ++ F ++ +L G + ++ L I +R+G +YDK E+ P++RQD+ Sbjct: 419 VE---SRVAFEPEKINKLLGTSIQKQEMLEIFDRIGL----KYDKATNEIVAPTFRQDIH 471 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNW 513 ADL EE+ R +G D+I + + N+ L+ + R V + L E +N+ Sbjct: 472 FMADLAEEVARFFGYDKIPTTLPKSSATIGGINMKLEVEELAREVAKFL---GFSEAMNY 528 Query: 514 SFISKEQSVLFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 SF S + G + + +EI NP+ D MRT + G+L + N +R D Sbjct: 529 SFESAKVFDKLGFSKDSDYRKAIEISNPLGEDFRIMRTQAVNGILNSLSTNYNRRNKDVH 588 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA---DA 625 +FE++++Y P ++ G+ EER +FV F K D Sbjct: 589 LFELANIY---IP--RELPLKGL-----------------PEERMQFVLGFYGKENFFDM 626 Query: 626 LSVIEPFVS----LDSLRFESGAPSWY-HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 V+E F+ D L + G + HPGR I + LGY GE HP++ D + + Sbjct: 627 KGVVEEFLYTLGITDKLHYNPGCKEEFLHPGRKADILLDG-VRLGYLGEVHPSVCDNYKI 685 Query: 681 SNPICGFEVYLD--SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII- 737 G + Y+ +P K ++ + RD++ +V ++I G + +II Sbjct: 686 -----GEKTYIAVLDLPNVIPFVNFDIKYTGIAKYPAISRDISLVVPKNILVGEIEDIIS 740 Query: 738 KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +N ++ +FD+++G + G KSVA + + + T D D+ +MD+I++ + K Sbjct: 741 ENGGSNLESFNLFDIYEGDQIDAGYKSVAYSLTFRNKERTLLDADVNEVMDKILKKLEDK 800 Query: 798 TNAVLRS 804 N +RS Sbjct: 801 -NIRIRS 806 >gi|328881237|emb|CCA54476.1| Phenylalanyl-tRNA synthetase beta chain [Streptomyces venezuelae ATCC 10712] Length = 842 Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 265/859 (30%), Positives = 419/859 (48%), Gaps = 71/859 (8%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + KVL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEQLGAGLTGPLVVGKVLTIEELT 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI +CGA N G V A PG+ +P + I RK Sbjct: 61 EFKKPIRFCTVDVGQANGTGEPQEI--ICGARNFAEGDKVVVALPGAVLPGDFRIAE-RK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + VG + LEL D ++D+++TP+R Sbjct: 118 TYGRVSRGMICSGDELGMGDDGTHGIIVLPPEHEVGTDATVLLELFDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 C+ +RG+A + A L++ +++ P +S P++I D C F V G Sbjct: 178 CLSMRGVARETATAYGLPLRDPALLDVPAP-NSYGYPVQIT----DPIGCDRFTARTVVG 232 Query: 225 VRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + +P W+R+RL+ G+RSIS VD+TNYV L+ G P H +D SR+ + VRRA + Sbjct: 233 LAPEARSPIWLRRRLQKAGMRSISLAVDVTNYVMLELGQPIHAYDRSRLDGPIGVRRAEA 292 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD-----------VL 332 GEKI LD L ++VI + IAG++GG + D TD V+ Sbjct: 293 GEKITTLDGTVRVLDAADLVITDNRGPIGIAGVMGGANTEIADPVTDPETGIVTGSSEVV 352 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A +D I+IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 353 IEAAHFDAISIARTARRHKLSSEASKRFERGVDPQAAAAAAQRCVDLLVLLAGGTAEAGV 412 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 + PR I + +++G+D E +R L+ +G V G+ D+ V+VPSWR D Sbjct: 413 TEISAPSAPRTITLPANHPDKVAGVDYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPD 471 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + E DL EE++R+ G + + P L + R L+ +Q R V R L+ +E +N Sbjct: 472 LSEPNDLAEEVIRLEGYENL---PSTLPKPPAGRGLTERQRVHRRVGRALSGAGYVEALN 528 Query: 513 WSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + F S++ G +R ++++NP+S + +RT+LLPGLL A RN R D Sbjct: 529 YPFTSEQVFDQLGLDADDTCRRVVKLVNPLSDEEPVLRTALLPGLLGALRRNDSRGSHDL 588 Query: 568 AIFEVSHVYENDTPEG--------QKYMAAGIRKGSSGIEGSGR----LWSDKSEE---- 611 A+FE V+ G ++ A I + ++ + R + + E+ Sbjct: 589 ALFETGLVFLAGEKPGVAVRLGVDRRPTAEEIAEVNAALPAQPRHVAVVVAGAREQAGWW 648 Query: 612 -RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG---IIKTSAEIVLGYF 667 + R D DA A +V + L G +HPGR ++ E +GY Sbjct: 649 GKGRPADWADAVEAARTVAREAGA--ELIVRQGQYGPWHPGRCAELLVLVDGEERTVGYA 706 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ++ FGL E+ LD + + + K ++ SS +D+A +V Sbjct: 707 GELHPRVVKSFGLPARTSAMELDLDLVEAASEGPLKAPRI---SSFPVATQDVALVVAAD 763 Query: 728 IPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 +PA + + + L++ V +FDV+ G LGEG KS+A + + T ++ Sbjct: 764 VPAADVQAALSEGAGELLESVRLFDVYTGDQLGEGSKSLAYALRFRAPDRTLTVEEATAA 823 Query: 787 MDRIVENVVKKTNAVLRSS 805 D V ++T AVLR + Sbjct: 824 RDAAVALASERTGAVLRGA 842 >gi|300912301|ref|ZP_07129744.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus TCH70] gi|300886547|gb|EFK81749.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus TCH70] Length = 800 Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 236/819 (28%), Positives = 411/819 (50%), Gaps = 35/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S +++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKDKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +E+ +S + + I G L L D +++ LTPNR+D + + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSESQVPGTDALQALYLDDQVMEFDLTPNRADALSMI 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G A ++ A K+ + + + S E+ +++ ++ V V +P Sbjct: 180 GTAYEVAALYNTKMTKPDTTSNELELSANDELTVTIENEDKVPYYSARVVHDVTIEPSPI 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ LD Sbjct: 240 WMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + L Sbjct: 300 DTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRRLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSE 410 + ++S RFE+G+ + + + L+ + G D + + I + Sbjct: 360 LRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITADK 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + R G D+ D + I +LGF D V VPS R+D+ K DL++E+ RIYG D Sbjct: 420 INRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIKEVARIYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F QR+ Sbjct: 480 DIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQRQ 538 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQK 585 +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ + Sbjct: 539 TIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQVE 598 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 599 YL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRADI 647 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR+ I ++V G+ GE HP + L FE+ D++ + Sbjct: 648 DGLHPGRTAEILLENKVV-GFIGELHPTLAADNDLKRTYV-FELNFDALMSVSVGYINYQ 705 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GKKS Sbjct: 706 PIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGKKS 762 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI++ ++T D+ + + I E + + AV+R Sbjct: 763 IAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|258645299|ref|ZP_05732768.1| phenylalanyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] gi|260402649|gb|EEW96196.1| phenylalanyl-tRNA synthetase, beta subunit [Dialister invisus DSM 15470] Length = 823 Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 250/840 (29%), Positives = 408/840 (48%), Gaps = 53/840 (6%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M +L WL +D + E++ +TLT G+ VE+V + +S K+LSVE++P+ Sbjct: 1 MNVSLKWLGTLVDIKGLDPEEMAETLTIDGIPVERVIYPGKGISGVVTGKILSVEKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN------------MIVN 105 D I +D G+ IQ+V GA NV+ GL+ A G+ +P + + + Sbjct: 61 DKLVICHVDVGRPDSIQIVTGANNVKEGLIVPVALDGAHVPAKHDAGTPGGLKYGDIKIK 120 Query: 106 VRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDV 159 ++RG++S GMMCS EL L ++ IM LP D VG +L D I ++ Sbjct: 121 AGELRGVKSAGMMCSCSELGLDENLFPGVNKEGIMILPADTQVGVDFHTLYDLDDVIFEM 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 LT NR+DC + G+AL++ A K+ I+ S I + D+ CK F Sbjct: 181 ELTANRADCFSMIGMALEVGAVFKRKVTLPFINVAESGMPIQGRAAVHISDARYCKRFCG 240 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTV 278 ++ ++ +P WM RL++ G+R I+ +VD NYV L+ G P H +D ++ + LT Sbjct: 241 RLMENIKMGRSPMWMENRLRSNGIRPINNIVDAANYVMLEIGQPLHTYDYDKVEGNELTC 300 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASD-GRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 R A E + LD E L ++VIA G IAG++GG + D T V +E A+ Sbjct: 301 RFAGEKENLKTLDGVERILHHTDLVIADKAGNPVCIAGVMGGLDSEITDKTKSVFLEAAV 360 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARN 396 +D ++ R+ + +G+ +++ R+E+G++ + I L++ T A + Sbjct: 361 FDSASVRRTSRRIGLRSEASGRYEKGINPARTEMAINRICQLLIEQGACTVAPGLLDEYP 420 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 I +P+ I E+ GI + + + ILE L FSV + K V+VP +R D+ Sbjct: 421 IKSEPQIINTTIDEINDYIGIKLSKNEMIDILESLHFSVAEDNGKIRVTVPDFRMDLYGM 480 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL EE+ R+YG I P + V K +S Q V +L + +VVN+SF+ Sbjct: 481 PDLAEEVARVYGYSNIPIT-TPWSAVT-KGIMSPSQEVLFKVTDILVENGLSQVVNYSFM 538 Query: 517 SK---------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 K E S ++ + I+NPIS + +MRTSLLPGL+ N+ + Sbjct: 539 DKNDLKKLNFPEDSSVYNA----ISIMNPISDEYPDMRTSLLPGLMHTLQYNLSKKNDQV 594 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADA 625 AIFE H+Y E +++ + K S I G G + R D FD KA Sbjct: 595 AIFEYGHIY-----EPKRFPLDELPKEYSLISGLMCGGPAENGYPNDQREYDFFDIKAVM 649 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +V+ +S+ + +HPG S +++L FGE HP +LD + + + Sbjct: 650 ENVLSA-LSIRDYKIRRTNYPVFHPGVSAEF-VKNDVILARFGELHPAVLDKWNIKRIVY 707 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 GF + L I I T KK+ S +RDLA +V + + + NII+ ++ + Sbjct: 708 GFTISLPDIMIFAGAATNYKKIPKFPS---AERDLAVLVPEQLSNENIENIIRQAGNKHL 764 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + +FD++QGK + G KS+A ++ + T D ++ ++ IV + + K N VLR+ Sbjct: 765 EKLYLFDLYQGKQVPAGFKSMAYRLSFRASDRTLTDAEVDNWIETIVIS-LGKVNVVLRT 823 >gi|126664102|ref|ZP_01735095.1| phenylalanyl-tRNA synthetase beta subunit [Flavobacteria bacterium BAL38] gi|126623816|gb|EAZ94511.1| phenylalanyl-tRNA synthetase beta subunit [Flavobacteria bacterium BAL38] Length = 809 Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 255/843 (30%), Positives = 415/843 (49%), Gaps = 74/843 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREAL----SPFTIVKVLSVERNP 56 M+ + +WLK + T++ +++ D LT +GLEVE VD E+L + VL+ E++P Sbjct: 1 MRISYNWLKQFIKTELKSDEVSDILTDLGLEVEGVDKFESLKGGLQGIVVGHVLTCEKHP 60 Query: 57 DLD-CAILRIDTGK-HQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRG 111 D D I +D G + +Q+VCGAPNV G A G+ + + N + KIRG Sbjct: 61 DADKLKITTVDLGDGNAPVQIVCGAPNVAAGQKVPVATIGTKLYDKEGNAFEIKKGKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIG 170 ES GM+C+E EL L + I+ L D G S + +D + ++ LTPNR+D + Sbjct: 121 HESHGMICAEDELGLGESHDGILILNEDLKPGTLGSKVFNIETDEVFEIGLTPNRADAMS 180 Query: 171 VRGIALDLVAAGL---GKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL AGL G + E+ I+ +S+ E L+I +++ L + + G Sbjct: 181 HMGVARDL-KAGLSQKGIISEL-ITPSVSNFKVEKRTLKIDVKVENEKLAPRYCGVTISG 238 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACS 283 V +P W++ RLK +GL + +VD+TNYV + G P H FDA++I + + V+ Sbjct: 239 VTVKTSPEWLQNRLKGIGLTPKNNIVDVTNYVLHELGQPLHAFDAAQIKGNKVIVKTVAG 298 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 G K LD+ E L ++++I + IAG+ GGK++G +NT + +E A ++P++I Sbjct: 299 GTKFTTLDDIERTLHEEDLMICDESGPMCIAGVFGGKNSGVSENTQAIFLESAYFNPVSI 358 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPR 402 ++ K + TD+ +RFERG+D LK LI + GG SDI + P+ Sbjct: 359 RKTAKRHSLSTDASFRFERGIDPTITEYALKRAALLIQEVAGGEITSDI-----VDLYPK 413 Query: 403 KI----VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEK 456 KI VF++ +V R+ G ++ E +IL L V D +++P++R DV + Sbjct: 414 KIEDFSVFIHFDKVNRIIGEEIKPETIKKILVSLDIKVNSISDAGLGLTIPAYRVDVTRE 473 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS-RTR------YVKRVLASRAMME 509 D++EEILR+YG + IK + K N ++ S RT + L S E Sbjct: 474 IDVIEEILRVYGYNNIK--------IPSKLNATIANSIRTEEFNVQNIIANQLCSLGFNE 525 Query: 510 VVNWSFISKEQSVLFGGGQRELEI--LNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 ++ S + + L + E + LNP+S D+S MR SLL L+A N++R +D Sbjct: 526 MMANSLTTPDYVKLSENLKEEFNVLMLNPLSNDLSAMRQSLLFSALEAVSFNINRRRSDL 585 Query: 568 AIFEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 FE Y + + +K++ + + W E+ D F K Sbjct: 586 KFFEFGKTYHKLPASYDEEKHLTLTVTGNR-----NNETWVKPQEKS----DFFLFKGYV 636 Query: 626 LSVIEPFVSLD----SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 ++V+ + LD SL FE+ + G+ + V+ FG +IL F + Sbjct: 637 INVLSR-LGLDKKVVSLPFENDVFA------EGLALAVGKEVIVEFGTIKKSILKHFDIK 689 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + + I QK + K + + V+RD A +VD++I + NI K + Sbjct: 690 QEVLYADFNWGKI---QKYVSNKIKYIDIPKYPEVRRDFALLVDENIQFEQIFNIAKQTE 746 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 + L+ D+ +FDV+QGK+L EGKKS A+ ++Q T D I +M ++ N + A Sbjct: 747 KSLLKDINLFDVYQGKNLPEGKKSYAVSFILQDNSKTLTDTQIDKIMSKLQGNFESQLGA 806 Query: 801 VLR 803 LR Sbjct: 807 SLR 809 >gi|296119689|ref|ZP_06838247.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium ammoniagenes DSM 20306] gi|295967572|gb|EFG80839.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium ammoniagenes DSM 20306] Length = 828 Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 255/858 (29%), Positives = 398/858 (46%), Gaps = 84/858 (9%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + +WL+ L VS E++ S+G E E + E P I +V +E Sbjct: 1 MLISQNWLQGVLGEHNPGWTVSSEQLDAGFVSVGFETEGYEPLPEITGPVVIGRVEEIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D E+Q ++CGA N G L + PG+ +P + R+ Sbjct: 61 LTQFKKPIRYCQVNVGDANGTGELQGIICGARNFEEGSLVPVSLPGAVLP-GGFKIAARE 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMEL--PIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 S GM+CS EL L+ S I+ L +G L +D + DV++TP+R Sbjct: 120 TYDHISNGMICSAAELGLTAKSEGIITLDESFAQHIGEDALPLLGGADTVFDVNVTPDRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISC--PLSSESIPLE--IKFDLDDSSLCKGFAMCCV 222 + +RG+ ++ +A N++ P+ S P I DL + + F + V Sbjct: 180 YALSMRGLGREIASA-------FNLAFVDPVGEASHPSGSLIDIDLREETKAIRFGLRKV 232 Query: 223 KGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ +P WM++ L G R ++ D+TNYV L G P H FDA++++ L VR A Sbjct: 233 TGIDPQAQSPFWMQRILMLSGQRPVNLATDVTNYVMLYLGQPMHAFDANKVAGNLVVRNA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GEK LD+ + +L D+VVI D IQS+AG++GG + D+TTDV E A WDPI Sbjct: 293 QAGEKFETLDHVKRELFADDVVICDDTGIQSLAGVMGGTTSEISDDTTDVYFEAATWDPI 352 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +ARS + + +++ RFERGVD + L L++ GG D P Sbjct: 353 TVARSSRRHKLSSEASRRFERGVDPAIVEYSLDLACELLVEYGGGHVEDARTLVGEVPDP 412 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKAD 458 + + + + +G++ E LE +G SV G +D +V++PSWR D+EE D Sbjct: 413 QVVAMDTIKPSQYAGVEYSQETITARLEEVGCSVAG-FDNGKALDVTIPSWRTDIEEDVD 471 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 LVEE+LR+ G+D I S LP+ + R LS Q R R + LA EV+ FI+ Sbjct: 472 LVEEVLRLEGLDAIPS-ILPIPTI-GSRGLSPAQKRRRAIGHSLAYAGYAEVIPSPFINA 529 Query: 519 EQSVLFGGGQRE--------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 E +F + + + + NP+ AD + + ++LLP +L+A RNV R D ++F Sbjct: 530 E---IFNTWELDADDERRNVVSVQNPLEADKAVLSSTLLPNMLEAVARNVARGRNDVSLF 586 Query: 571 EVSHVY---ENDTP--------------------EGQKYMAAGIRKGSSGIEGSGRLWSD 607 V V + TP Q A + G+ EG W + Sbjct: 587 GVQQVAFKRADSTPMPDVSKRPSDEEIEQLLNTLPSQPLHVATVGAGNLEFEGP---WGE 643 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 R DA A V + + E +HPGR IK ++V GY Sbjct: 644 G-----RAYTYADAIESARQVAR--AAGVEIEVEKAEAKPWHPGRCAAIKVDGDVV-GYA 695 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP I+ GL C E+ + ++P T LSS + +D+A +VD+ Sbjct: 696 GELHPQIVKAMGLPARTCAMELDVTALPF-----TANLPAPVLSSFPTLHQDIAVVVDED 750 Query: 728 IPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 +PA T+ + + L++ V +FDVF+G+ LGE KKS+A ++L + T D++ Sbjct: 751 LPAETVRQTLEEGAGELLESVELFDVFRGEQLGEAKKSLAFKMLFRAADRTLTDEEANTH 810 Query: 787 MDRIVENVVKKTNAVLRS 804 E ++ A +R+ Sbjct: 811 RLAAAELAKQRLGAEMRA 828 >gi|332293537|ref|YP_004432146.1| phenylalanyl-tRNA synthetase, beta subunit [Krokinobacter diaphorus 4H-3-7-5] gi|332171623|gb|AEE20878.1| phenylalanyl-tRNA synthetase, beta subunit [Krokinobacter diaphorus 4H-3-7-5] Length = 808 Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 248/833 (29%), Positives = 407/833 (48%), Gaps = 55/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK +D D S EK + LT +GLE+E +D ++ L I VL+ ++ Sbjct: 1 MKISYNWLKQFIDIDWSAEKTGNLLTDLGLEIEGIDTYQSVKGGLEGIVIGHVLTCVQHE 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-PENNMIVNVRK--IRGI 112 + D I +D G + +Q+VCGAPNV G A G+ + E ++K IRG Sbjct: 61 NADKLKITTVDIGADKPVQIVCGAPNVAAGQKVPVATIGTTLYTEEGEAWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L D G ++ E+ +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGKSHDGIMILNEDLIPGTPAAEVFEIENDQVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A L + + P S+ S +E I + D+ +A + ++ Sbjct: 181 WGVARDLKAGLLQQGVNKGLITP-STSSFKIEKRLHKIDVQVLDAEKAPRYAGVVISDLK 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 + +P W++ RLKA+GL I+ +VD TNYV D G P H FD ++I+ D + VR +G Sbjct: 240 VSESPEWLKHRLKAIGLSPINNIVDATNYVLHDLGQPLHAFDLNKIAGDKIEVRTVEAGT 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K LD E +L D+++I + IAG+ GG H+G +NT+ + +E A ++P+ + + Sbjct: 300 KFTTLDGVERELHEDDLMICDAEKPMCIAGVFGGAHSGVTENTSAIFLESAYFNPVAVRK 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI- 404 + K G+ TD+ +RFERG+D L LI+ + GG + + + P+KI Sbjct: 360 TAKRHGLNTDASFRFERGIDPNIAEYALTRAALLIMEIAGGEIT----SEIVDIYPKKIE 415 Query: 405 ---VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+N +L G ++P E IL L + + +++P++R DV +AD+ Sbjct: 416 DQQVFLNFDNATKLIGEELPKEVIKGILMSLDIKINNVTESGIGMTIPAFRNDVTREADV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EEILR+YG + I V + + LA++ E++ S + Sbjct: 476 IEEILRVYGYNNITFGKKLNATVSSSSKFD-DHKVSDVIGNQLAAQGFYEMMANSLTTPA 534 Query: 520 QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + L + E +E+LNP+ ++S MR S+L L+A NV+R + +FE Y Sbjct: 535 YTALSENLKEEHQVEMLNPLGKELSVMRQSMLFSGLEAISYNVNRRRGNIKLFEFGKTYH 594 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 N T E ++ + S E S W++ + + + K +V+E L Sbjct: 595 NYTEERKEDKHLALFVTGSRTEES---WTNPTTP----TNFYYLKGVVSAVLE---KLGI 644 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGY-----FGEFHPNILDFFGLSNPICGFEVYLD 692 R S A ++ I + + LG +G +IL F LS + + D Sbjct: 645 TRVRSSAV------KNDIFSEAVGLSLGKQQVVSYGIVKKSILKKFDLSQDVYYADFNWD 698 Query: 693 SI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 +I I+ + K K + S V+RD A ++D ++ + I K ++ L+ DV +F Sbjct: 699 AILEIAARNNVKFKDIPKYPS---VRRDFALLLDANVQFEDITTIAKQTEKQLLKDVNLF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK+L EGKKS A+ L+Q T D I M+++ + K+ A LR Sbjct: 756 DVYEGKNLPEGKKSYAVSFLLQDENKTLTDKQIDKTMNKLQQRFEKELGATLR 808 >gi|329728746|gb|EGG65167.1| phenylalanine--tRNA ligase, beta subunit [Staphylococcus aureus subsp. aureus 21193] Length = 800 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 240/821 (29%), Positives = 417/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKPETTSNELDLSANDELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ RL G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++VI + ++AG++GG + + T++++++ A++DP++I + + Sbjct: 298 LDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIKGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPILAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|325962873|ref|YP_004240779.1| phenylalanyl-tRNA synthetase subunit beta [Arthrobacter phenanthrenivorans Sphe3] gi|323468960|gb|ADX72645.1| phenylalanyl-tRNA synthetase beta subunit [Arthrobacter phenanthrenivorans Sphe3] Length = 847 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 249/849 (29%), Positives = 395/849 (46%), Gaps = 97/849 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 M+ LSWL++ + + E + L +G E E V P + +VLSV + P Sbjct: 1 MRIPLSWLREFAEVPAGATAEDVMAELVKVGFEEEDVHRPTDTLQGPIVVGQVLSVVKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G+ Q + ++CGA N G V PG+ +P Sbjct: 61 QTNGKTINWCQVRVVPEGQEQTLTGDGIDPSGVQGIICGAHNFVEGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + +D I+ L +D VG + L L D Sbjct: 120 GDFHISARKTYGHLSAGMIASVRELGIGEDHDGILVLSRIGLDPEVGTDAMELLGLYDQA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSL- 213 ++++TP+R +RG+A + A + +S P ++ S +K + DD+ + Sbjct: 180 AEINVTPDRGYAFSIRGVAREYAHATGTTFTDPATRVSAP-AALSGGFGVKIN-DDAPIY 237 Query: 214 ----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 C F V+GV P WM RL+ G+RSIS VDI+NYV L+ G P H +D Sbjct: 238 GKPGCDRFVARTVRGVDATRPTPPWMSSRLRLAGIRSISLPVDISNYVMLELGQPLHFYD 297 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 ++S + VRRA +GEK+ LD +E L P++++I IAG++GG D T Sbjct: 298 QDKLSGDIVVRRAVAGEKLATLDGRERSLDPEDLLITDASGPIGIAGVMGGAATEVSDAT 357 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 + VL+E A ++ ++IARS + + +++ RFERGVD + V L++ L GGTA Sbjct: 358 STVLIEAAHFEEVSIARSRRRHKLPSEASKRFERGVDWHIAGIAAQRAVDLLVELAGGTA 417 Query: 389 ----SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 +D+ A + F + + GID E + LE LG +V+ + V Sbjct: 418 DEAGTDVGTAPDSVTIELPAAFAAARI----GIDFTEEQIVTSLEDLGAAVVKNDGGWRV 473 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 + PSWR D+E K DL EEI R+ G DQI P L R L+ Q + R + + LA Sbjct: 474 TAPSWRHDLETKEDLSEEIARLVGYDQI---PATLPVAPPGRGLTRVQQQRRRLIQALAD 530 Query: 505 RAMMEVVNWSFISKEQSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 + EV+++ F+SK + F G G+ +++ NPIS + +RTS+LPGL++ RN Sbjct: 531 AGLTEVLSYPFVSKAANDTFGVPGEGAGRTAVKLANPISEEQGYLRTSILPGLIEVAKRN 590 Query: 560 VDRAIADFAIFEVSHVY--------ENDTPEG-----------------QKYMAAGIRKG 594 R D A+FE V+ E+ P G Q + A + G Sbjct: 591 HSRGFRDLALFESGLVFLPAERTGTESIPPLGVKPADEVLDALYDGVPHQPFHLAAVLTG 650 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 G S ++ + +D+ D L V E VS G+ +HPGR+ Sbjct: 651 HDSPAAPGH--SPRTWDWADALDIARLAGDVLGV-EVVVS-------QGSHQAFHPGRAA 700 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + V+GY GE HP +L + E+ D++ + + ++S+ Sbjct: 701 RLSLRTGEVVGYAGELHPKLLAASDMPARSVALELNADALFDAAPDVIVAR---YISTFP 757 Query: 715 PVKRDLAFIVDQHIPA-GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 +D+A +V +PA L + + L++DV +FDV+ GK + EGKKS+A + Sbjct: 758 VATQDVALVVPAGVPADDVLAALREGAGELLEDVALFDVYAGKGIEEGKKSLAFGL---- 813 Query: 774 LKDTFRDDD 782 FR DD Sbjct: 814 ---RFRADD 819 >gi|183982471|ref|YP_001850762.1| phenylalanyl-tRNA synthetase, beta chain PheT [Mycobacterium marinum M] gi|183175797|gb|ACC40907.1| phenylalanyl-tRNA synthetase, beta chain PheT [Mycobacterium marinum M] Length = 829 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 254/861 (29%), Positives = 420/861 (48%), Gaps = 89/861 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE- 53 M+ SWL++ + DVS E++ L IG EVE V ++ P T+ +V+ +E Sbjct: 1 MRVPYSWLREVVAAGAPGWDVSPEELEQALVRIGHEVEAVTPVGPVTGPLTVGRVIEIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C++ D G+ + ++VCGA N VG L V A PG+ +P IV VRK Sbjct: 61 LSGFKKPIRACSV---DFGEGEGREIVCGATNFAVGDLVVGALPGTILPSGFEIV-VRKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G +S GMMCS EL L + + I+ LP A G +D L D + +++TP+R C Sbjct: 117 YGRKSKGMMCSAAELGLGAEHSGILVLPPGTAQPGAAAADILGFDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV- 225 + +RG+A ++ A L + +++ P E+ PL + + + + FA+ V G+ Sbjct: 177 MSIRGLAREIACAFDLDFVDPADVAPLPAEGEAWPLNVHPE----TGVRRFALRPVTGID 232 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 V+P W+++RL G+R S VD+TNYV L+ G+P H D +RIS +VR A GE Sbjct: 233 PGAVSPWWLQRRLLMCGMRVTSPAVDVTNYVMLELGHPMHAHDRNRISGAFSVRFARPGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+ E L P +V+I + +I G++G ++TDVL+E A+WD ++R Sbjct: 293 TVVTLDDVERRLDPTDVLIVDEVATTAIGGVMGAASTEVRGDSTDVLLEAAIWDAAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYK 400 + + L + +++ R+ER VD + L +L+ + GG S + Sbjct: 353 TQRRLHLPSEAARRYERSVDPAVSVAALDRCAALLADIAGGAVSPTLTDWRGDPPRDDWS 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADL 459 P I R +G+ + R L ++G V + + V+ PSWR D+++ ADL Sbjct: 413 PPPIRIDADLPDRFAGVVYGPGTTARRLAQIGAEVLVDDQAALTVTPPSWRPDLQQPADL 472 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VEE++R+ G++ I S L R L+ Q R R + + LA E++ F+ Sbjct: 473 VEEVMRLEGLEAIPSV---LPSAPAGRGLTAGQRRRRAIGKSLALSGFTEILPTPFLPAG 529 Query: 520 QSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 L+G + ++NP+ AD + T+LLP LL+A GRNV R +AD A++ V+ Sbjct: 530 VFDLWGLAADDPRRATTNVVNPLEADRPQLATTLLPALLEALGRNVSRGLADVALYAVAQ 589 Query: 575 VYE--------------------------NDTPEGQKYMAA---GIRKGSSGIEGSGR-L 604 V + P +++AA G+R+ G G GR + Sbjct: 590 VVQPTDQTRGIELIPVHRRPTDGEIAALDASLPRQPQHVAAVLTGLRE-PRGPWGPGRAV 648 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 + + E R + A+A A+ V+ LR P +HPGR + E V+ Sbjct: 649 EAADAFEAVRII----ARASAVDVM--------LRATQHLP--WHPGRCAEVLVG-EAVV 693 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ G+ HP +++ GL C E+ LD+IPI +T +S V +DL+ +V Sbjct: 694 GHAGQLHPAVIERAGLPKGTCALELNLDAIPI-----VETLPAPRVSPFPAVFQDLSLVV 748 Query: 725 DQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + A + + +++ L++D+ +FDVF G +G+ +KS+ + + T +DD Sbjct: 749 AADVSAQMVADAVRDGAGDLLEDLQLFDVFTGPQIGDNRKSLTFALRFRAPDRTLTEDDA 808 Query: 784 RILMDRIVENVVKKTNAVLRS 804 D V+ ++ AVLRS Sbjct: 809 SAARDAAVQCAAQRVGAVLRS 829 >gi|253731750|ref|ZP_04865915.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253724564|gb|EES93293.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] Length = 800 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 240/821 (29%), Positives = 416/821 (50%), Gaps = 39/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M + WLK+++ D S+ + + +T G+EV+ +D + + + V S E++PD D Sbjct: 1 MLISNEWLKEYVTIDDSVSNLAERITRTGIEVDDLIDYTKDIKNLVVGFVKSKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+ Sbjct: 61 KLNVCQVDIGEDEPVQIVCGAPNVDAGQYVIVAKVGGRLP-GGIKIKRAKLRGERSEGMI 119 Query: 119 CSEKELMLSDDS-----ASIMELPIDAPVGGRLSDYLE---LSDPIIDVSLTPNRSDCIG 170 CS +E+ +S + S + + +A V G +D L+ L D +++ LTPNR+D + Sbjct: 120 CSLQEIGISSNYIPKSFESGIYVFSEAQVPG--TDALQALYLDDQVMEFDLTPNRADALS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G A ++ A K+ + + S E+ +++ ++ V V + Sbjct: 178 MIGTAYEVAALYNTKMTKPETTSNELDLSANDELTVTIENEDKVPYYSARVVHDVTIEPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM+ L G+R I+ +VDI+NYV L+ G P H+FD I S + VR+A GEK+ Sbjct: 238 PIWMQAHLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDAIGSQQIVVRQANEGEKMTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ E +L ++VI + ++AG++GG + + T+++++E A++DP++I + + Sbjct: 298 LDDTERELLTSDIVITNGQTPIALAGVMGGDFSEVKEQTSNIVIEGAIFDPVSIRHTSRR 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMN 408 L + ++S RFE+G+ + + + L+ + G D + + I Sbjct: 358 LNLRSESSSRFEKGIATEFVDEAVDRACYLLQTYANGKVLKDRVSSGELGAFITPIDITA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++ R G D+ D + I +LGF D V VPS R+D+ K DL+EE+ RIYG Sbjct: 418 DKINRTIGFDLSQNDIVTIFNQLGFDTEINDDVITVLVPSRRKDITIKEDLIEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I S LP+ L+ +Q +TR VK VL + + + +S +SKE + F Q Sbjct: 478 YDDIPS-TLPVFDKVTSGQLTDRQYKTRMVKEVLEGAGLDQAITYSLVSKEDATAFSMQQ 536 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEG 583 R+ +++L P+S +++R SLLP L++A NV R D +FE+ +V+ E + P+ Sbjct: 537 RQTIDLLMPMSEAHASLRQSLLPHLIEAASYNVARKNKDVKLFEIGNVFFANGEGELPDQ 596 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +Y+ +GI G + W K E VD + AK V E ++L+ + Sbjct: 597 VEYL-SGILTGDYVVNQ----WQGKKET----VDFYLAKGVVDRVSEK-LNLE-FSYRRA 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I ++V G+ GE HP + L FE+ D++ Sbjct: 646 DIDGLHPGRTAEILLENKVV-GFIGELHPILAADNDLKRTYV-FELNFDALMAVSVGYIN 703 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + + + RD+A VDQ+IPA L++ I + ++ D VFDV+QG+ L +GK Sbjct: 704 YQPIPRFPGM---SRDIALEVDQNIPAADLLSTIHAHGGNILKDTLVFDVYQGEHLEKGK 760 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+AI++ ++T D+ + + I E + + AV+R Sbjct: 761 KSIAIRLNYLDTEETLTDERVSKVQAEI-EAALIEQGAVIR 800 >gi|225016472|ref|ZP_03705664.1| hypothetical protein CLOSTMETH_00378 [Clostridium methylpentosum DSM 5476] gi|224950774|gb|EEG31983.1| hypothetical protein CLOSTMETH_00378 [Clostridium methylpentosum DSM 5476] Length = 785 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 240/819 (29%), Positives = 411/819 (50%), Gaps = 67/819 (8%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVE--KVDNREALSPFTIVKVLSVERNPDLD-CA 61 + WL D++D DV+ + + +T G +VE +++ E +S KVLS+E++PD D Sbjct: 1 MKWLSDYVDIDVTPREFSEAMTMSGSKVEGYEIEGSE-ISKVVTGKVLSIEKHPDADKLV 59 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 + ++D G+ IQ+V GA N+ VG + G+ +P + K+RG+ S GMMCS Sbjct: 60 VCQMDVGREDSIQIVTGATNLFVGAVVPVCLDGATLP-GGKKIKKGKLRGVVSEGMMCSL 118 Query: 122 KELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 EL L+ +D I++ P +G + + L L+D ++ +T NR DC+ V G Sbjct: 119 GELGLTVNDFPGTIEDGIFILQEPCG--LGLDIREVLGLNDTCVEFEITSNRPDCLSVVG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A + A LK S I E+K ++ ++ LC + VK V +P W Sbjct: 177 LAREAAATFHVPLKLKEPVVKGSGGDIHDELKVEVQNTDLCFRYVAKLVKNVTIKPSPRW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDN 292 MR+RL+A G+R I+ LVDITNYV L+ G P H FD ++ + + VR A +GEKI L+ Sbjct: 237 MRERLRASGVRPINNLVDITNYVMLEYGQPMHAFDLRYVAGNSICVRSAKNGEKITTLEG 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E++L+ +VIA + ++AG++GG+++G D+T V+ E A + ++ + K LGI Sbjct: 297 VEHELTDRMLVIADAEKPIAVAGVMGGEYSGIMDDTATVVFESASFQGSSVRTTAKALGI 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNSEV 411 T+S RFE+G+D + + L+ L G D I + +P+++ Sbjct: 357 RTESSARFEKGLDPRNCYEAILRACELVELLGAGEVVDGIIDEAHFDAEPKRVKLEPEWT 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R GI+V + + +LE L F V G+ ++ VPS+R D+E KAD+ EEI RIYG + Sbjct: 417 NRFLGINVTRDYMVEVLESLSFQVEGD----DIIVPSFRIDIEHKADIAEEIARIYGYNN 472 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ--- 528 I P + + + +L+ +Q + ++ + EV +SFIS + G Q Sbjct: 473 I---PTTVIRGVAEASLTPEQKFETAIGNIMLALGCSEVATYSFISPKYYDKLGLPQDSA 529 Query: 529 --RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 R + I NP+ D S MRT+ LP +L+ RN + ++E+ VY P+G++ Sbjct: 530 LRRSVTISNPLGEDTSVMRTTTLPSMLEVLSRNYNNRNPKAWMYEIGKVY---LPKGEEL 586 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI--EPFVSLDSLRFESGA 644 + G+ ++ K + + D L+V + VS D + F Sbjct: 587 PDENNKLTIGLYGGNADFYTLKG--------MVETLLDRLNVTGWDIAVSPDVIPF---- 634 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 H GR I + LG GE HP L+ +G+ G + YL + ++ Sbjct: 635 ----HSGRCATISKDG-VELGVLGEVHPVTLETYGI-----GTKAYLACFDFAALYEGQS 684 Query: 705 KKVVHLSSLHPV------KRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 ++ S HP+ RDL+ + D+ +P + I+ +V ++++ V FD+F+G Sbjct: 685 EE----KSYHPLPKFPASNRDLSVVCDEDLPVIEIEKTIRQSVGKILEQVEFFDIFRGDQ 740 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 +G+ KKSV+ ++++ T D++ + ++++N+ K Sbjct: 741 IGKHKKSVSYSIVLRAQDRTLNDEEADNAIKKVLKNLEK 779 >gi|319760489|ref|YP_004124427.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Blochmannia vafer str. BVAF] gi|318039203|gb|ADV33753.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Blochmannia vafer str. BVAF] Length = 803 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 226/824 (27%), Positives = 417/824 (50%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF---TIVKVLSVERNPD 57 MK++ WL+ + V+ ++ + LT G V + + L+ F I ++++ + +P+ Sbjct: 1 MKYSELWLRKWTNPPVTHNELINQLTMAGFNVNETQSI-ILNKFYGVVIAEIINFKIHPN 59 Query: 58 LDCA-ILRIDTGKHQEIQVVC-GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 +D I+ I+ G ++ I ++ N R + V A G+ +P+ +V + I+GI+S Sbjct: 60 VDNTWIITINNGTNKLISIISDNHINYRKKMKVVVANIGALLPDG-QVVTSKIIQGIKSE 118 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 G++C+ L L ++ I+ELP +AP+G DYL+L+D IIDV +TPNR DC+ + G+A Sbjct: 119 GILCTFSTLGLHNNRKDIIELPDNAPIGYDFYDYLDLNDKIIDVDITPNRGDCLSIIGLA 178 Query: 176 LDLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ + +LK+ IN P + E+IP+ I ++ C F +K + NV P Sbjct: 179 REIASINKLQLKKLIINTIIPTTHETIPIRI----EEPKFCPKFLGKIIKNININVPTPL 234 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK-ILAL 290 ++++L+ G+RS + + DITNYV L+ G+P H++D +I+ + + +R + GEK I Sbjct: 235 KIQEKLRRCGIRSTNIVEDITNYVVLELGHPIHIYDYEKINKNEIIIRLSKPGEKLIFDE 294 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 N L + ++I+ + +IAG+ + T+++ ++V+ DP I + K Sbjct: 295 KNINIKLFENTLIISDRNKPLAIAGLEIENKSNISLKTSNIFIQVSFLDPTVIIKQSKLY 354 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITYKPRKIVFMN 408 ++ERGVD L + L++ C G + I + K +KI Sbjct: 355 NFHHFYTMQYERGVDCNISELTLNYFTELLIKNCNGHVGPTIKIINKKFIPKIKKIKLQR 414 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +++ + G V +D IL+ LGF + + + + VS+P+WR D+ + +L+ EI+RIYG Sbjct: 415 AKLNSILGFHVETQDISNILKSLGFKINVKDNLWIVSIPTWRFDINIEENLISEIIRIYG 474 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR--VLASRAMMEVVNWSFISKE-QSVLFG 525 ++I + + + + + L K +L R E++ +SFI+ Q ++ Sbjct: 475 YNKIPQDSIKTVLIPNSLHTQLSNETVTLSKSKIILIDRGYQEIITYSFINPNIQKLMKF 534 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTP 581 ++NPI+ +MS MR SL PGL+K N +R D +FE + N+ Sbjct: 535 QDITPFTLINPINQEMSVMRLSLWPGLIKTMLYNQNRQQKDIRLFESGMCFIPNKNNNDQ 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++M +GIR E W K +D +D K D SV+ + + F+ Sbjct: 595 VSHQFMLSGIRSEFKNNEH----WDSKISS----IDFYDIKGDVESVLNMIYRHNQIIFK 646 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S HPG+ I + I++GY G HP I GL I FE++ D+IP + Sbjct: 647 SCIHPALHPGQRAEIYCN-NILIGYIGMIHPKIQHLLGLRANILMFELFWDAIP-----K 700 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLG 759 ++ +S RD++F++ +I A +++ +K N+++LI + + D++ GK + Sbjct: 701 FTLSQITSVSKFPKNHRDISFVLPIYISASAVIDELKKLNINQLI-CIKLIDLYTGKKIP 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS I++ Q TF++ +I+ +++ + + K+ + +LR Sbjct: 760 IGFKSFTIKLTFQSNTHTFQEQEIKEILNTCIITLQKRFHIILR 803 >gi|262091795|gb|ACY25383.1| phenylalanyl-tRNA synthetase beta subunit [uncultured actinobacterium] Length = 818 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 253/861 (29%), Positives = 412/861 (47%), Gaps = 99/861 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 M+ LSW+K+ +D V+ ++I D L +G EVE++ + A P KVLS+E Sbjct: 1 MRAPLSWIKEFVDIPASVTADQISDGLIRVGFEVEEIIYQGADLTGPLKFAKVLSIEEIT 60 Query: 57 DLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + I + +D G+ + V+CGA N VG + V A PG+ +P + + R+ G S Sbjct: 61 EFKKPIRYVGLDCGEGETRFVICGATNFAVGDIVVAALPGAVLP-GDFTIGARETYGKTS 119 Query: 115 TGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 GM+CS +EL +SDD A IM + +G + L ++D I DV++ P+R + +RG Sbjct: 120 NGMICSGRELGISDDHAGIMVFAEGEVTIGADAIEALHINDVIFDVAVNPDRGYALSIRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV---- 229 IA + VA LG LK + P+E L KG + +G +V Sbjct: 180 IARE-VAGSLG-LKFTD----------PVEALRTLKFEETGKGVSAKIAEGHPASVFYLR 227 Query: 230 ----------APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 P WMR+R++ +G+RSIS +VD+TNYV L+ G P H FD ++I LT++ Sbjct: 228 TLSNFDAKATTPIWMRRRIEKMGMRSISLVVDVTNYVMLELGQPLHAFDKAKIKGGLTIK 287 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA +K LD E L P+++++ D + ++AG +GG + + TTD+ +E + Sbjct: 288 RAGKAQKFKTLDGVERTLDPEDLMVCDDEQPLALAGTMGGLSSEITETTTDIALEAVHFC 347 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL-ILSLCGGTASDICIARNIT 398 + IA++ + + +++ RFER VD P L S + L +S +A + Sbjct: 348 EVCIAKNSRRHKLSSEASRRFERSVD-----PSLAEFASARFVQLLTAHSSAQHVATVVD 402 Query: 399 YKP--RKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 +P +V M+ V + G D+ E +L +G V + F V PSWR D+ Sbjct: 403 GEPIYAPLVTMDPGYVSKTLGFDISAEKVAEVLRVIGCDV--DEKSFTVDPPSWRADLLT 460 Query: 456 KADLVEEILRIYGVDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 AD EE+ R+ G D+I S P PL + QQ R R + +LASR + EV + Sbjct: 461 AADFTEEVARMIGYDKIPSVLPPRPL-----HATFTPQQKRRRAIATMLASRGLAEVQTF 515 Query: 514 SFISKEQSVLFGG-GQREL--EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 F ++ G G+R L ++ NP+S + MR L+PGL++ RN+ R DFAIF Sbjct: 516 PFTNQATIESMGFVGERALTYKVANPMSEEFPLMRVHLVPGLIEVAQRNISRGAKDFAIF 575 Query: 571 EVSHVYEND-------TPE-----GQK-------------YMAAGIRKGSSGIEGSGRLW 605 E+ ++ + +P+ GQK Y AG+ G + E W Sbjct: 576 EMGSIFRSSQKLVPAVSPDLSKRPGQKVIDEIFASVPAQGYHVAGLLVGKTENEN----W 631 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 K+ R + DA A A ++ F +L+ S W HPGR + V Sbjct: 632 QGKA----RAYNWQDAIAYAQDILA-FCNLEWTVARSDLAPW-HPGRCAELIVDGRAV-A 684 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + GE HP I+ +GL F V L ++P SQ R T + ++ +D+A IVD Sbjct: 685 HAGELHPRIVSAYGLPERSVAFAVALGALPDSQLVRPTT-----VGTMPAAVQDVALIVD 739 Query: 726 QHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + A + ++ L++ +T+FD + +G+GK S+A ++ + T +++ Sbjct: 740 ATVSAADIEGALREGAGHLLESITLFDRYD--KIGDGKISLAFTLVFRAQDRTLTGEEVS 797 Query: 785 ILMDRIVENVVKKTNAVLRSS 805 + + + AV+R++ Sbjct: 798 AMRESATAVAAAEFGAVVRTA 818 >gi|225849635|ref|YP_002729869.1| phenylalanyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] gi|225645650|gb|ACO03836.1| phenylalanyl-tRNA synthetase, beta subunit [Persephonella marina EX-H1] Length = 803 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 245/814 (30%), Positives = 391/814 (48%), Gaps = 40/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ SW+K+ +D D+ E++ + L + G+E E + VK+LSV+++P+ D Sbjct: 1 MRVPYSWIKEFIDIDIPAEEVVERLNTTGIEAVCETFGEYIEGIVTVKILSVKKHPERDK 60 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 ++ T H+ QVV GA NV+ G + A GS I + + R I+S GM S Sbjct: 61 LLVCEATDGHKVYQVVTGADNVKEGSTVILAKEGSVI--KGIKITKRNFGSIQSEGMFLS 118 Query: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSD-PIIDVSLTPNRSDCIGVRGIALDLV 179 +EL +S+ S ++ LP D G + L L D II++ +TPNR D + VRG+A ++ Sbjct: 119 LEELGISEKSEGVLILPDDIKPGEDPNRILGLGDEKIIEIEITPNRGDALSVRGLAREIG 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A K KE+ ++ E IP EI +S C + +K V +P ++ +L Sbjct: 179 AIFGIKRKEVFPVISIAEEIIP-EI---FVNSERCTRYRGIIIKDVNIRPSPFHIQLKLI 234 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 G+ I+ +VDITNY+ L G P H FD +I + VR A GEKI+ LD +E L Sbjct: 235 KSGMNPINNVVDITNYILLQEGQPLHAFDLDKIEGAVYVRNAREGEKIVTLDGEEKQLKE 294 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 ++VIA D ++ +IAG+IGG + D NT ++L+E A++D I++ ++ K L + TDS YR Sbjct: 295 TDLVIADDKKVIAIAGVIGGDNTKVDSNTKNILLEAAVFDSISVRKTAKRLAVSTDSSYR 354 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD+Q + V LIL GG A Y+P KI V+R+ G+ + Sbjct: 355 FERGVDIQNLPNAQDKAVELILKTAGGKAVGEKDIYPDPYRPEKIKLREKTVERILGVSI 414 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLP 478 P E+ +L RL E D +PS+R D++ + DLVEE+ R+ G D E P Sbjct: 415 PKEECSDLLNRLEIPTEIEEDGTVSQIPSFRAFDLKREIDLVEEVGRLKGFDTF-GEKYP 473 Query: 479 LTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 VE K + L + RTR L + EVV ++F+ +E + G + I N Sbjct: 474 RVSVESFRKSDEYLFELRTR---DFLKDNGLDEVVTYTFVGEEIFNILGIPVPVIRIENY 530 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 + S MR +L L+ N+ I D ++FE+S + + E + G+ Sbjct: 531 LLKTQSVMRDNLAVSLIGVFQENLRHQIKDLSVFEISSAFFEEYEE----IRVGLLLSGR 586 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 I+G D+ + K S + + L +R+ + +P S I Sbjct: 587 YIKGFNFTRDDQRFSTTDKWNFLKVKGLINSYLRS-IGLKDVRYIPSDLPYLNPYESADI 645 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP-------------ISQKKRTK 703 + + V GY G+ HP D + E+ L +P + K + Sbjct: 646 YINDQYV-GYIGKIHPEKADRLEIPKETYIAELKLRYVPRDINDSSLKEGYLFTLYKNAE 704 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 L VKRDLAF V +++ L+N++ LID V +FD++ + +K Sbjct: 705 IPVFRELPKYPSVKRDLAFEVAENLQIDKLINVLNRSSELIDKVELFDIYY---ISSDRK 761 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 SVA+ V + + D+++ ++ VE V++K Sbjct: 762 SVALSVEFRAEDRSLSDEEV----NKEVELVIQK 791 >gi|225619072|ref|YP_002720298.1| phenylalanyl-tRNA synthetase subunit alpha [Brachyspira hyodysenteriae WA1] gi|225213891|gb|ACN82625.1| phenylalanyl-tRNA synthetase alpha chain [Brachyspira hyodysenteriae WA1] Length = 807 Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 244/839 (29%), Positives = 408/839 (48%), Gaps = 69/839 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 M+ LSWLK+ ++ D S+E+I +T G E+ ++ P I+ K++SV ++PD Sbjct: 1 MRVPLSWLKEFVNLDGFSVEEIAKKITLAGSEISSIETTGGDIPGVIIGKIISVHKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ ++D G + +VCGAPNV+ G+ A GS +P N + + IRG ES GM Sbjct: 61 DKLSVCKVDVGDGDTLSIVCGAPNVKEGIYVPIAMIGSKLP-NGLTIKKASIRGFESNGM 119 Query: 118 MCSEKEL-----------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 +CS EL + D+ + D+ +G LS + +D I +V +T NR Sbjct: 120 ICSRTELGYEEAEGVYGIWILDEDIEKVHADKDSILGNSLSTIVGSTDHIFNVEITANRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 D + + G A + L + ++I + ++ I +++ C + +K + Sbjct: 180 DLVSIIGFARE---CSLVLERRVSIPSVNTYDAAGGNIDITVENQESCYKYVGRLIKDIT 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P+WM++RLK G+ I+ +VD+TNYV L+ G P H +D +I D + VR A SGE Sbjct: 237 VGPSPDWMQKRLKMCGINPINNIVDVTNYVMLEYGQPLHAYDFDKIKDGKIIVRNARSGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI LD +E DL+ D +VIA + +AG++GG ++ T ++L+E A +D I + + Sbjct: 297 KITLLDGREIDLTDDVLVIADSEKPIGVAGVMGGDSTKIENETKNILIESAYFDHIAVKK 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRK 403 S TD+ YRFER +D + L +V LI++L G AS + Sbjct: 357 STIATNTKTDASYRFERDIDHTLTLAALNRVVDLIVTLDNGCKIASRSKEVNVKQFDANI 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVE 461 IVF VKR G+++ + I +R GF + GE + +V +P +R D+ DL+E Sbjct: 417 IVFDCGLVKRYLGLNMNKMEISSIFKRYGFKAVALGE-NNLKVEIPYYRHDLSIAEDLIE 475 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 EI R+YG + I S +P + ++ S +VK +AS + E +S + + Sbjct: 476 EIARVYGYNNIDSN-VPHIKCNP---INTDYSEVSFVKHRMASYGLYETKQYSM--GDSN 529 Query: 522 VLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 V G E ++++NP++ DM +R + L LL + N + + A+FEV +++ Sbjct: 530 VFKSLGIEEEKLIKVVNPLTNDMDVLRPTTLASLLNSVAYNQNHRHKNGALFEVGNIFYK 589 Query: 577 ENDTPEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 END +K+++A G+ + +LW+ + R D FD VIE + Sbjct: 590 ENDNFVEEKHLSAVMFGLYQ--------EKLWN----KDARAYDFFDMSG----VIEELL 633 Query: 634 SLD----SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 D W P SG I E + G G HP +L F +S EV Sbjct: 634 IKDLKCTDYNLIPKEHKWLIPTMSGEIVIFGEKI-GIIGRLHPKLLKLFDISG-----EV 687 Query: 690 YLDSIPISQ-----KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLI 744 Y I I + K+R K +K+ + V RDLA + +I ++ I + +I Sbjct: 688 YFLDIDIRKTLKLVKERVKKQKLKDIGKYPAVFRDLALVCSNNIEFSKVIKSISKFNNII 747 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V V D + G+ + +GK+S+AI + T R++DI + ++E + + + LR Sbjct: 748 QNVNVVDRYVGEQVEDGKQSIAISITYYDPNKTLREEDINNVEKSLLEMLKTRFDINLR 806 >gi|313633665|gb|EFS00420.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria seeligeri FSL N1-067] Length = 802 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 230/826 (27%), Positives = 419/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ + +S E++ + +T G+E+E V+ A L + +VL+ ER+PD Sbjct: 1 MLVSYNWVKEFFEEFPLSAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLTCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEKEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP VG L L D I+D+++TPNR+D Sbjct: 117 EGMICSLSELGFESKVVPKAYADGIYVLPEHVEVGVSAISLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + + ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTQPDVSEKGTADTFLTVEVENPTETPYYAIKMVENIT 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRKLQAGHTVITNGTEPIAIAGVMGGESSEVTENTTVVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNRAKAINKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G ++ + + I ERLGF + DK + VPS R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTEITLAEIETIFERLGFVLEVNDDKLIIEVPSRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LSL Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSLNQKTRRVMRNYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSNEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC-RFVDLFDAKADALSVIEPFVSLDSLR 639 ++ AG+ G+ W + ++ + VD F K +++ L Sbjct: 592 LPIEQEHLAGLITGN---------WHEADWQKTPKPVDFFVLKGIVEGLVKKLGIKADLV 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I + + GY G HP + L FE+ ++ + + K Sbjct: 643 WKQTEKEELHPGRTASIYIEGKEI-GYLGGLHPAVEASADLKETYV-FEINVEEVLAASK 700 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 ++ V H +P + RDLA +VD++ T++ +IK + L+ D+ +FD+F+G+S Sbjct: 701 EKV----VYHPIPRYPEMTRDLALLVDKNTDHATILEVIKSHGGNLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLNAIIR 802 >gi|118466258|ref|YP_882303.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium avium 104] gi|118167545|gb|ABK68442.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium avium 104] Length = 828 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 245/820 (29%), Positives = 400/820 (48%), Gaps = 86/820 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + D DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRVPYSWLREVVAAGAPDWDVAPAELEQTLIRIGHEVEEVIELGPVDGPLTVGRVTDIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C +D G + ++VCGA N G L V A PG+ +P + RK Sbjct: 61 LTGFKKPIQFC---HVDVGDDVDREIVCGATNFVAGDLVVVALPGTTLP-GGFAITARKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D I +++TP+R C Sbjct: 117 YGRNSDGMICSAAELGLGADHSGILVLPPGTAEPGADGAAVLGLDDVIFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV- 225 + +RG+A ++ A L + ++ P+ E+ PL ++ D + + FA+ V G+ Sbjct: 177 MSLRGLAREIACAYDLEFVDPADVKPLPVDGEAWPLTVQPD----TGVRRFALRPVTGID 232 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 V+P W+++RL G+R+ S VD+TNYV L+ G+P H D +RIS L VR A GE Sbjct: 233 PAAVSPWWLQRRLLLSGIRATSPAVDVTNYVMLELGHPMHAHDRNRISGGLGVRFARPGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+ E L P +V+I D +I G++G ++TDVL+E A+WDP ++R Sbjct: 293 TVVTLDDIERKLEPVDVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAVWDPAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYK 400 + + L + +++ R+ERGVD + L +L+ + GGT S+ + Sbjct: 353 TQRRLHLPSEAARRYERGVDPAISVAALDRCAALLAGIAGGTVSEALTDWRGEPACDGWS 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P I RL+G+ P + + L ++G +V + V PSWR D+ + ADLV Sbjct: 413 PPAIQMPADLPDRLAGVTYPPGTAAKRLAQIGAAVTADGGTLTVVPPSWRPDLLQPADLV 472 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+LR+ G++ I S L R LS Q R R + R LA +E++ F+ Sbjct: 473 EEVLRLEGLEVIGSV---LPSAPAGRGLSAAQRRRRAIGRSLAQSGYVEILPTPFLPAGV 529 Query: 521 SVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 ++G + ++LNP+ +D ++ T+LLP LL+A RNV R + D +++ ++ V Sbjct: 530 FDVWGLPDDDPRRVTTQVLNPLESDRPHLATTLLPALLEALVRNVSRGLVDVSLYALAQV 589 Query: 576 YENDT--------------------------PEGQKYMAA---GIRKGSSGIEGSGRLWS 606 + P +++AA G+R+ G G GR Sbjct: 590 VQPTAETRAVQFIPVDRRPTDAEIAVLDASLPRQPQHVAAVLTGLRE-QRGPWGPGR--- 645 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 R D F+A + VI +D +R + +HPGR + + +GY Sbjct: 646 -----RAEAADAFEA----VRVIARAAGVD-VRLRAAQQLPWHPGRCAEVLVG-DTPVGY 694 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G+ HP +++ GL C E+ LD+IP+ T +S V +D++ +V Sbjct: 695 AGQLHPAVVERAGLPRGTCALELDLDAIPL-----VATLPAPRVSPFPAVFQDVSLVVAA 749 Query: 727 HIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +PA + + ++ L++D+ +FDVF G LGE +KS+ Sbjct: 750 DVPAQAVADAVREGAGDLLEDLQLFDVFTGPQLGEHRKSL 789 >gi|282850356|ref|ZP_06259735.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] gi|282579849|gb|EFB85253.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella parvula ATCC 17745] Length = 814 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 236/819 (28%), Positives = 399/819 (48%), Gaps = 60/819 (7%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKV---DNREALSPFTIVKVLSVERN 55 MK +L W+ +++ D++ +++ D LT G+ VE V DN + K++ + ++ Sbjct: 1 MKASLQWMNEYVPVDMNRPAQELADELTQAGIPVEDVIAMDN--GIKKIYTGKIVEITKH 58 Query: 56 PDLD----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 PD D C + + G+ Q+V A NV VG + A S + + I K+R Sbjct: 59 PDADKLQVCQVECLTEEGEPVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLR 117 Query: 111 GIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G+ S GM CS E L+L +++ I P P+G + D L L+D + + LT N Sbjct: 118 GVVSEGMFCSVAEFGISSDLVLPEEAQGIYIFPEGTPIGLDVKDVLGLNDTVYEFELTAN 177 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R+DC + G++ + K I + ESI + ++ LC F V Sbjct: 178 RADCFSMVGLSREFGVMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTD 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V+ +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA + Sbjct: 238 VKVEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRAKN 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD E +L+ ++IA R +AGI+GG + + TT V+ E A+++ +I Sbjct: 298 GEVLVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAVFNGPSI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 R+ K LG+ +++ RFERGV+ + + L+ +C D+ + ++ P Sbjct: 358 RRTAKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVDVGVI-DVYKNPVE 416 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + F +++ G ++ ++ +RIL L F V + DK VP+WR DV D+ Sbjct: 417 QHTVTFTAAKINDYLGTNIEKDEMVRILTALEFVVTEDGDKLSALVPTWRGDVTVMPDIA 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EE+ RIY D I P V ++ +++ T+ V LA M +++ +SF+ K+ Sbjct: 477 EEVARIYNYDNIA--PTIPVAVLSSGGMTPKKALTKEVTHALAKLGMTQIITFSFMHKDG 534 Query: 520 --QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++V Sbjct: 535 LSNMMLPEGDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANV 594 Query: 576 YE-NDTP----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSV 628 YE D P ++ MA GI G + G W+ R D +D K DAL Sbjct: 595 YEPKDLPLTEVPHERPMACGILMGKANQAG----WNQAE----RTTDFYDVKGIVDALLA 646 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + S G ++HPG S +I+ Y GE HP + F L + FE Sbjct: 647 ---ELGVTSYEINRGTEPYFHPGVSAQYVVDGKIIAQY-GELHPQVSKNFDLPGKVYMFE 702 Query: 689 VYLD---SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLI 744 + L+ S+ I + T K S RDL+ + + +G +++IIK + + Sbjct: 703 IDLEAVLSLTIPPFRYTSFSKFPGSS------RDLSIVAPVSVSSGEILSIIKEHGGEYL 756 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 757 ESASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 795 >gi|218460202|ref|ZP_03500293.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli Kim 5] Length = 298 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 153/297 (51%), Positives = 206/297 (69%), Gaps = 1/297 (0%) Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 M+P L+ L+L LCGGTA+ + ++P+ + F SEVKRL+G++V E+S IL Sbjct: 2 MVPGLERTTELVLELCGGTAARAEVVGYKPHEPKVVDFPYSEVKRLTGLEVSTEESNSIL 61 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 RLGF+V G ++ VSVPSWR DV+ KADLVEE++RI+GVD+IK PL + R L Sbjct: 62 ARLGFTVSGSGERVSVSVPSWRPDVDGKADLVEEVMRIHGVDKIKPAPLESHAAVNGRIL 121 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSL 548 + Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L++ NPI+A+MS+MR SL Sbjct: 122 TTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALKLANPIAAEMSDMRPSL 181 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK 608 LPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ + G GR+WS+ Sbjct: 182 LPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTASLAGGGRMWSNA 241 Query: 609 SEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 + + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG IK ++VL Sbjct: 242 VKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKMGPKVVL 298 >gi|269126380|ref|YP_003299750.1| phenylalanyl-tRNA synthetase subunit beta [Thermomonospora curvata DSM 43183] gi|268311338|gb|ACY97712.1| phenylalanyl-tRNA synthetase, beta subunit [Thermomonospora curvata DSM 43183] Length = 822 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 242/855 (28%), Positives = 411/855 (48%), Gaps = 83/855 (9%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVE--- 53 M+ LSWL++H L V+ + L + GLEVE V+ + P + +VL++E Sbjct: 1 MRVPLSWLREHVELPAGVTGRDLAAKLIAAGLEVETVEAAGHDVTGPLVVGQVLAIEELT 60 Query: 54 --RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + P C +++ G+ + ++CGA N G V A PG +P + RK G Sbjct: 61 GFKKPIRYC---QVEVGEDKPRNIICGARNFTEGDKVVVALPGCRLP-GGFEIGARKTYG 116 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + DD + I+ LP D VG + L + D ++D+++TP+R + + Sbjct: 117 KISEGMICSVAELGIGDDHSGILVLPGDERVGADAIELLGIRDEVLDIAVTPDRGYALSI 176 Query: 172 RGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNV 229 RG+A + +A G+ + P + + +DD + C F + ++G+ Sbjct: 177 RGVAREAAIAYGVPFRDPAAVRLPDTDDQP--GYPASIDDPTACDRFVLRQIRGLNPAAT 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P WM+ RL G+R +S VD+TNY+ L+ G P H FD +++ + VRRA GEK+ Sbjct: 235 TPLWMQVRLYRAGMRPVSLAVDVTNYLMLELGQPLHAFDRGKLTGEIVVRRARPGEKLET 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+ L P++++I S+AG +GG D+N+TD+++E A +D I +AR + Sbjct: 295 LDHVTRALDPEDILITDASGPISLAGTMGGLATEIDENSTDIVIEAAHFDAIGVARMVRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +++ YRFERGVD + + L+ L G + + I Sbjct: 355 HKLSSEASYRFERGVDRELPLYASYRAAQLLAELGGAEIVPGVTHAQVPVEQTTITIPAD 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +++G+ + +R L +G +V G+ V+ PSWR D+ + DL EE++R+ G Sbjct: 415 HPGKVAGVTYSRDTVVRRLTEIGCTVTGD-QTLTVAPPSWRPDLTDPNDLAEEVIRLEGY 473 Query: 470 DQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-----QSVL 523 ++I + P P+ + L+ +Q R R V R LA+ +E + + FI + Q Sbjct: 474 EEIPARPPRPIA----GQGLTPEQRRRRRVGRALAAAGYVETLCFPFIGAKDFDDLQLSA 529 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTP 581 +R L + NP++ + +RT+LLPGLLKA RNV R +D +FE+ VY D P Sbjct: 530 DDERRRALRVANPLTEEGPLLRTTLLPGLLKALARNVGRGQSDVGLFEMGLVYRPRPDAP 589 Query: 582 EGQKYMA----------------------------AGIRKGSSGIEGSGRL--WSDKSEE 611 +A AG R+ +G G GR W+D E Sbjct: 590 PKAPRLAVDRGPTPEEIASLEAALPDQPLRVAVVVAGDRE-QAGWWGQGRPASWADAIEA 648 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 R V A+ + + ++R + AP +HPGR + + ++++G+ GE H Sbjct: 649 -ARTV----ARESGVEL--------TVRADRHAP--WHPGRCAALY-AGDVLVGHAGELH 692 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P ++ +GL E+ L + + R +S+ P +D+A IVD PA Sbjct: 693 PRVIAAYGLPARTAAMELELSRLAVPGPVRAP-----QVSTYPPATQDVALIVDASRPAA 747 Query: 732 TLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + ++ L++ + +FDV+ G+ +GEG+KS+A + + T +++ D Sbjct: 748 EVEAALREGAGELLESIRLFDVYTGEQIGEGRKSLAFTLRFRAPDRTLTAEEVGRARDAA 807 Query: 791 VENVVKKTNAVLRSS 805 V ++T AVLR + Sbjct: 808 VALAAERTGAVLRGA 822 >gi|331269144|ref|YP_004395636.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum BKT015925] gi|329125694|gb|AEB75639.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum BKT015925] Length = 791 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 238/824 (28%), Positives = 429/824 (52%), Gaps = 54/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M ++WLKD++D ++S +++ D LT G +VE+V + ++ K++ +E++PD + Sbjct: 1 MLVPINWLKDYVDINISPQELGDALTLSGSKVEEVIVTGDVINKVVTGKIVKIEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDINAEELIQIVTAATNMKEQDIVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 119 Query: 119 CSEKELMLSDDS--ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M +P + P+G + + + L+ ID +T NR DC+ + GIA Sbjct: 120 CSEEELGIAGDEPVVGLMIMPEETPLGKEVKEVINLAKASIDFEITSNRPDCLSIIGIAR 179 Query: 177 DLVAAGLG-KLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + AA LG K N + ++E+I +K ++ D LCK + VK V+ +P+WM Sbjct: 180 E-TAATLGIDYKTPNTEYTVQNNENISNSLKVEVKDE-LCKRYMARGVKNVKIAPSPSWM 237 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQ 293 ++RL G++ I+ +VDITN+V ++ G P H FD +IS + + V RA +GEK + LD + Sbjct: 238 QERLLDAGVKPINNIVDITNFVMIELGQPMHAFDRKQISSNTIVVERAKNGEKFITLDGE 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L+ + + I R ++AGI+GG ++ ++TT+V+ E A +D NI S K L + Sbjct: 298 ERELNEEILNIKDGERTIALAGIMGGLNSEVKEDTTEVVFECANFDGTNIRVSSKKLNLR 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VK 412 T++ +FE+ +D + + LI L G + + K I+ ++S + Sbjct: 358 TEASGKFEKDLDPNAVELAMNRACHLIQELGAGEVMEGTVDIYPNKKETHILEVDSNWIN 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G ++ E L+RL + D ++VP++R D+ K D+ EEI RIYG + I Sbjct: 418 KFLGTELSREQMKDSLDRLELATEINGDMLVITVPTFRCDINIKEDVAEEIARIYGYNNI 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF---GGG 527 K+ + ++ +N Q + + V ++AS + + + +SF+S + +L Sbjct: 478 KATTPSVETLKGGKNPK-QLLQDKVVDTLIAS-GLNQSIAYSFVSPKVFDKILIPQESDL 535 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----ENDTPE 582 ++ + I NP+ D S MRT+ +P ++++ RN R+ ++ +FE+ VY EN+ PE Sbjct: 536 RKVVTIRNPLGEDYSIMRTTSIPSMMESLSRNYSRSNSEVRLFEIGKVYIPNEDENELPE 595 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-- 640 + ++ G+ VD D K ++++ + ++F Sbjct: 596 ERNIISLGMYGN---------------------VDYLDLKGVVENILDNL-GITKVKFQR 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ES PS +HPG++ + + + G GE HP++ + + + E+ +D + K Sbjct: 634 ESENPS-FHPGKTAALYIKKDFI-GVVGEVHPDVAENYEVDERCYVAELNMD---VLFKY 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 KK V L V RD+A +VD+ I + + IKN +L++ V +FDV+QGK + Sbjct: 689 AQTEKKYVELPKFPAVTRDIAILVDRDILVQEIEDTIKNQGGKLLESVKLFDVYQGKQIP 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 E KKS+A ++ + + T D D+ + D+I+ + K A LR Sbjct: 749 EDKKSIAYALVYRGDR-TLTDKDVNKVHDKIIRALEHKLGAELR 791 >gi|238019113|ref|ZP_04599539.1| hypothetical protein VEIDISOL_00975 [Veillonella dispar ATCC 17748] gi|237863812|gb|EEP65102.1| hypothetical protein VEIDISOL_00975 [Veillonella dispar ATCC 17748] Length = 814 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 231/817 (28%), Positives = 397/817 (48%), Gaps = 56/817 (6%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKV---DNREALSPFTIVKVLSVERN 55 MK +L W+ +++ D++ +++ D LT G+ VE V DN + K++ + ++ Sbjct: 1 MKASLQWMNEYVPVDMNRPAQELADELTQAGIPVEDVIAMDN--GIKKIYTGKIVEITKH 58 Query: 56 PDLD----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 PD D C + + G+ Q+V A NV VG + A S + + I K+R Sbjct: 59 PDADKLQVCQVECLTEEGEPVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLR 117 Query: 111 GIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G+ S GM CS E L+L +++ I P + P+G + D L L+D + + LT N Sbjct: 118 GVVSEGMFCSVAEFGISSDLVLPEEAQGIYIFPENTPIGLDVKDVLGLNDTVYEFELTAN 177 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R+DC + G++ + K I + ESI + ++ LC F V Sbjct: 178 RADCFSMVGLSREFGIMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTD 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V+ +P W++ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA + Sbjct: 238 VKVEPSPLWIQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHQLVARRAKN 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD E +L+ ++IA R +AGI+GG + + TT VL E A+++ +I Sbjct: 298 GEVLVTLDGSERELNDSMLIIADTERPVGVAGIMGGFDSEVTNETTTVLFEAAVFNGPSI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 R+ K LG+ +++ RFERGV+ + + L+ +C D+ + ++ P Sbjct: 358 RRTSKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVDVGVI-DVYKNPVE 416 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + F ++ G ++ ++ +RIL L F V + DK VP+WR DV D+ Sbjct: 417 QHTVTFTAEQINDYLGTNIEKDEMVRILTALEFVVTEDGDKLSALVPTWRGDVTVMPDIA 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EE+ RIY D IK P V ++ +++ T+ V LA M +++ +SF+ K+ Sbjct: 477 EEVARIYNYDNIK--PTIPVAVLSSGGMTPKKALTKEVTHALAKLGMTQIITFSFMHKDG 534 Query: 520 --QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +L R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++V Sbjct: 535 LTNMMLPEVDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANV 594 Query: 576 YE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALS 627 YE + P ++ MA GI G + G W+ R D +D K DAL Sbjct: 595 YEPKALPLTEVPH-ERPMACGILMGKANQAG----WNQAE----RTTDFYDVKGIVDALL 645 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + + S G ++HPG S +++ Y GE HP + F L + F Sbjct: 646 A---ELGVTSYEINRGTEPYFHPGVSAQYVVDGKMIAQY-GELHPQVSKNFDLPGKVYMF 701 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDD 746 E+ L+++ + S RDLA + + +G +++IIK + +++ Sbjct: 702 EIDLEAV---LSLTIPAFRYTSFSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEYLEN 758 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 759 ASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 795 >gi|284991459|ref|YP_003410013.1| phenylalanyl-tRNA synthetase subunit beta [Geodermatophilus obscurus DSM 43160] gi|284064704|gb|ADB75642.1| phenylalanyl-tRNA synthetase, beta subunit [Geodermatophilus obscurus DSM 43160] Length = 820 Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 257/855 (30%), Positives = 412/855 (48%), Gaps = 86/855 (10%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE---- 53 M+ + WL +H+D +E + +GLEVE+V E P + +VL +E Sbjct: 1 MRVPIGWLAEHVDIPAGTPVEDLDTAFVRLGLEVEEVHRPAEVTGPLVVGRVLEIEELTG 60 Query: 54 -RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + P C ++D G+ Q +VCGA N VG V A PG+ +P + RK Sbjct: 61 YKKPIRYC---QVDVGEQQPRGIVCGATNFAVGDSVVVALPGAVLP-GGFGIAARKTYDH 116 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS +EL + +D A I+ L DAP G + + L D +I++++TP+R C+ + Sbjct: 117 VSDGMICSVRELGVGEDHAGILVLGDDAPAPGTPAGPVVGLDDVVIELAITPDRGYCLSL 176 Query: 172 RGIALDLVAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 RGIA ++ GLG + ++ P + P ++D+ C F+M ++G+ Sbjct: 177 RGIAREM-GTGLGVEWRDPGALTPPAWSGEP-AWPVSVEDADRCDRFSMVALEGLDPTAP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P WMR+RL +RSIS VD+TNYV L+ G P H FD R+ + VRRA GE++ Sbjct: 235 SPWWMRRRLAQSSVRSISLAVDVTNYVMLELGQPMHAFDRDRVRGPIVVRRAREGERLTT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E LS D+++I D +A ++GG D T+ VL+E A W+P +AR+ + Sbjct: 295 LDGVERALSSDDLLITDDSGPIGLAAVMGGASTEIGDGTSTVLLEAAHWEPTGVARTARR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG----GTASDICIARNITYKPRKIV 405 + +++ RFERGVD + + L +L+ G GT D+ T PR + Sbjct: 355 HRLPSEAAKRFERGVDPEMTVAALVRAAALLAEYGGARVVGTPVDVD-----TRGPRPTI 409 Query: 406 FMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 ++ + R++G+ P +L +G +V G+ D+ V+ PSWR D+ + ADLVEE++ Sbjct: 410 PLDPARPGRVAGVPYPPAQVTELLGTVGCTVEGDSDRLTVTPPSWRPDLTDPADLVEEVV 469 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+ G D++ S L R L+ +Q R R V RVLA +E ++ F+ Sbjct: 470 RLAGYDEVPSV---LPTAPPGRGLTERQRRRRAVGRVLAEFGYVEAPSFPFVGTAALDAL 526 Query: 525 GGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 G + + + NP+S + +RT+LLPGLL A RN+ R I D A+FE V+ Sbjct: 527 GLAEDDPRRQVVLVRNPLSEEEPALRTTLLPGLLAALARNLSRGIRDVALFEHGAVFPGG 586 Query: 580 -------------------------TPEGQKYMAAGI--RKGSSGIEGSGR--LWSDKSE 610 PE ++A + + G G GR +W+D + Sbjct: 587 ERSAAPLPGVDRRPDDETLAALLGAVPEQPWHVAVALSGHREPRGWWGQGRPAVWADAVQ 646 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 R A+A V L +G + +HPGR + +V G+ GE Sbjct: 647 AARRV-------AEAAGV--------ELTVRAGERAPWHPGRCAELLVDGRVV-GHAGEL 690 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP + L E+ +D++P + HLSS PV DLAF+++ +PA Sbjct: 691 HPRVCAALDLPARTAVMELDVDALPPASVPVGP-----HLSSFPPVFVDLAFVLNAAVPA 745 Query: 731 GTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + I+ L++ V +FDV+ G +GEG++S+A + ++ T ++ + R Sbjct: 746 AAVEESIREAAGELLEAVRLFDVYTGPQVGEGRRSLAWSLTLRAPDRTLSGEEAAEVRRR 805 Query: 790 IVENVVKKTNAVLRS 804 +V V + A LR Sbjct: 806 VVAFVEEAQQAELRG 820 >gi|313676958|ref|YP_004054954.1| phenylalanyl-tRNA synthetase beta subunit [Marivirga tractuosa DSM 4126] gi|312943656|gb|ADR22846.1| phenylalanyl-tRNA synthetase beta subunit [Marivirga tractuosa DSM 4126] Length = 805 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 236/822 (28%), Positives = 408/822 (49%), Gaps = 37/822 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 MK L+WLK++++ S E++ +TLT+ GLEVE ++ E L I +V + E++P Sbjct: 1 MKIALNWLKNYINITQSPEELSETLTNTGLEVEGMEEIETVPGGLKGLVIGEVKTCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI---PENNMIVNVRKIRGI 112 + D I +D G+H+ +Q+VCGAPNV G V A S + P+ + KIRG Sbjct: 61 NADKLKITTVDIGEHEPVQIVCGAPNVAAGQKVVVATVNSTLYPNPDEPFKIKKSKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+C+E E+ + IM L D P G ++Y + SD + ++ LTPNR+D +G Sbjct: 121 VSMGMICAEDEIGMGASHDGIMVLDTDKPNGTPAAEYFNIESDIVYEIGLTPNRADAMGH 180 Query: 172 RGIALDLVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G A D+ A +K +I + ++ +P+ + ++++ C ++ + G++ + Sbjct: 181 IGAARDIKAVTGEAVKFPSILDFKVDNQDLPITV--EVENKEACPRYSGLSISGIKVAPS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P+W++ LK++GL+ I+ +VD+TNYV + G P H F+A +IS + + V+ G K + Sbjct: 239 PDWLQNTLKSIGLQPINNVVDVTNYVMHELGQPLHAFNADKISGNTIKVKNLAEGSKFIT 298 Query: 290 LDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E LS +++I D IAG+ GG +G D+TT V +E A + ++ ++ + Sbjct: 299 LDEKERKLSAKDLMICDGDSNPLCIAGVFGGIDSGVKDDTTKVFLESAYFSADSVRKTSQ 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + + TD+ +R+ERG D + LK LI + GG +S+I + R+++ Sbjct: 359 HHQLKTDASFRYERGTDPNITVYALKRAALLIQEVAGGQISSEIQDEYPVAIPNREVMMK 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRI 466 + RL G + ++ IL RL + + F+ VP +R DV +AD++EEI+RI Sbjct: 419 YKNIDRLIGKKLEQDEIHTILNRLDIETTDKIETGFKAIVPPYRVDVTREADVIEEIIRI 478 Query: 467 YGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG + I E L + + + + R + +L + E++ S S Sbjct: 479 YGFNNIALPETLSSSYMASFPEVDPVKMR-KEAGLLLTANGFQEIMTNSLTKPGFSEQLD 537 Query: 526 G--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G + +EILN +S D+ MR L+ L N++R D +E VY+ + Sbjct: 538 GFNSKENVEILNKLSEDLGVMRQDLMFTALDVLAYNINRRQTDLKFYEFGKVYKKINSKY 597 Query: 584 QKYMAAGIR-KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ M GI G + E W K+ E +F DL+ A L + + F + +S+ E Sbjct: 598 KEEMRLGIYLTGKNEAEN----WIRKN-ESVKFHDLYSA---VLKIFDKF-NAESIENEE 648 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + G IK + V+ G+ L GL + V +++ K Sbjct: 649 FHNDCFDYGLKLKIKQN---VVAELGKLSKKALKLSGLKQDVFYANVNWEAL---LKMVN 702 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEG 761 + +S VKRDL+ ++D ++ + I +K LI ++ VFDV+QG + +G Sbjct: 703 VNIQFEPVSKFPEVKRDLSLVIDDNVSYDEIKKISLKQAQYLISNIDVFDVYQGDKIEKG 762 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KK+ A+ +Q T D I MD++++ + AV+R Sbjct: 763 KKAYALSFTLQDKTKTLTDKIIDKTMDKLMKAFENEIGAVIR 804 >gi|303325493|ref|ZP_07355936.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] gi|302863409|gb|EFL86340.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio sp. 3_1_syn3] Length = 801 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 229/822 (27%), Positives = 406/822 (49%), Gaps = 53/822 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +LSWL++ + E + D LT +GLE+E + +A+S + VL ++PD D Sbjct: 1 MLLSLSWLREFTPYEGDAEALGDRLTMLGLELEDIQRPYDAISAIVVGHVLECVQHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++D G+ + + +VCGAPNV G A GS +P+ +I K+RG S GM+ Sbjct: 61 HLHCCKVDAGQGELLDIVCGAPNVAAGQKVPVALVGSSLPDGTVIKKA-KLRGAPSFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L++D + IM LP +AP G RL D L+L ++D+S+TPNR+DC+ V G+A + Sbjct: 120 CSERELGLTEDHSGIMVLPENAPAGARLVDVLDLDREVLDISITPNRADCLSVLGLAREA 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS---------SLCKGFAMCCVKGVRNNV 229 A + PL+ +PL + D ++ LC ++ + ++ Sbjct: 180 ALA---------FNLPLTIPDLPLHLDADGPEAVVPIEIAAPELCWLYSGRVISEIKVAP 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P +R RL AVG+R IS +VD+TNY+ + G P H FD ++ + V+ A GEK + Sbjct: 231 SPMRVRHRLHAVGVRPISNIVDVTNYILFECGQPLHSFDLDKLRGGRIVVKPAREGEKFV 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L+ ++ I R +AG++GG + D + +V +E A++ P I ++ + Sbjct: 291 TLDGQERVLTGRDLCICDAERPVGLAGVMGGLNTEITDQSRNVFLESAVFRPGTIRKTSR 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFM 407 LG+ +++ YRFERG+D Q + L +++ + GG + I + P +I F Sbjct: 351 RLGLSSEASYRFERGIDQQRTVWALDRACAMMAAFGGGVVRRGLSIVEPRPFVPARIAFR 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G+ + E ++L +G +V D + V PSWR D+ +ADL+EE+ R++ Sbjct: 411 PARADALLGVRLSPEFGEKVLTGMGCAVEKSNDAWLVEQPSWRPDLTREADLIEEVGRVH 470 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSV 522 G+D I LP ++ R + +RY +K A + E VN+SF+ + Sbjct: 471 GLDTIPPV-LPPVHLDLARA---AEPESRYAFWLRLKHWGAGLGLNEAVNYSFVGHKDLD 526 Query: 523 LFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 G G+ + I+NP+SA+ +RT L PGLL+ N+ + +FE++H++E D Sbjct: 527 QLGLPGEGRISIMNPLSAEQDALRTDLAPGLLQDLRNNLAQGAQGLRLFELAHIFEADP- 585 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 A+ +G+ G L+ + + V+ AD V+E + L Sbjct: 586 ------ASETTARETGMLGI-LLYGARHDASWPHVEADMGYADLKGVVEHLLHFLHLPAP 638 Query: 642 SGAPSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + HP + AE +G G P + + F P V+L + + + Sbjct: 639 VCRQAEEHPFLLPCVDVLAEGRRVGVMGRVKPALAEDFHARKP-----VWLAELNLELLR 693 Query: 701 RTKTKKVVHLSSL---HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGK 756 K VV + L PV+RD+ + + +++ + + L+++ + D F+ + Sbjct: 694 ELYDKAVVRFTPLPVYPPVRRDITVMAGPELKVSQVLDHLAGLKLPLLEEAVLVDCFEPE 753 Query: 757 SLG--EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 G E +++ ++ + T +D ++ +++ +++V+ Sbjct: 754 RDGNKEPARNLTFRLTFRHAGRTLKDAEVDKEREKVADSLVR 795 >gi|295099673|emb|CBK88762.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium cylindroides T2-87] Length = 800 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 238/828 (28%), Positives = 422/828 (50%), Gaps = 52/828 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-- 57 M+ + WL ++D +D+S+E++ D +TS GLEVE ++ + I +V +PD Sbjct: 1 MRISRKWLSQYMDVSDLSIEEMADRITSAGLEVEGIERLAQGTNLVIGQVEECYPHPDSD 60 Query: 58 -LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L+C +++ G ++ + +VCGAPNV G + A PG+ +P + KIRG S G Sbjct: 61 HLNCT--KVNVG-NEVLDIVCGAPNVAAGQKVIVALPGAKLPGGE--IKKGKIRGQVSNG 115 Query: 117 MMCSEKEL-----MLSDDSASIME-LPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCI 169 M+CS EL LS++ S +E L DAPVG + YL L D I+++ LTPNRSDC+ Sbjct: 116 MICSLVELGVDPHSLSEEQKSGIEVLDQDAPVGNKDPFAYLGLDDEILEIGLTPNRSDCL 175 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNN 228 + L+ AG +E+ + + ++ K + ++ C F + + Sbjct: 176 AAFNMGLE---AGAILKREVKLPEYQGAANVGGPTKLHVSSTTEKCPLFLGKVIGKITIK 232 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P WM++ L A G++SI+ +VDI+N V L+ G P H +D I + + E + Sbjct: 233 ESPKWMKELLAASGMKSINNVVDISNIVMLETGQPMHFYDKDAIVNQEITVASGFDEDYV 292 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 ALD Y L P+++VI + + IAGI+GG + D T +++E A++D ++I + + Sbjct: 293 ALDGVTYHLLPEDIVITNQSKPIGIAGIMGGDDSKILDTTKGLIIECAIFDHVSIRNTAR 352 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVFM 407 L + T+S R+++G++ L V L++ + + + Y P + Sbjct: 353 RLNLATESSIRYQKGIEPLAASKALDRAVQLLIEYADAKMIEETVQYGDSGYTPVSLSCT 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 ++ G D E+ + ERL F E K+ V +PS+R D+E KADL EE++R+ Sbjct: 413 LKDINDRLGTDFNAEEVKDVFERLHFEPEYEDGKYMVHIPSYRTDIEGKADLSEEVIRLL 472 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---KEQSVLF 524 G D++ S LPL ++ + + L+ +Q R V+ + + + + ++ +S K+ ++L Sbjct: 473 GYDRLPS-TLPLMEMTEGK-LNEKQKLIRTVRNLYCQLGLQDCLTYTLVSTQKKDNAIL- 529 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEG 583 G Q +++ +P+S + +RTS+LP LL N R I D +FE+S+V T Sbjct: 530 -GLQDPIQLASPMSEERRWIRTSILPSLLDVVSYNHARTIKDVNVFELSNVAGTQGTRMH 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 ++ +G+ + + ++ L SD + LFD +S + FE+ Sbjct: 589 LAFVLSGLLQQTRWLQ--YELPSDFYTGKGLIETLFDHIG---------ISAARVSFEAN 637 Query: 644 APS--WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 +HP +S I + + GY G+ HP + I E+ D++ +K + Sbjct: 638 TEDVVHFHPYQSAKILIDKKCI-GYLGKIHPQYAKETDCKDVIMA-ELDFDALVDIKKAK 695 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVFQGK 756 K +S V+RDLAF++D+++P +V+II N + +I +V VFDV+QG+ Sbjct: 696 I---KFAPISKYPSVQRDLAFVIDRNMPVKKVVSIINKNARYNKEEIIRNVEVFDVYQGE 752 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + +KSVA+ + Q T +D++I + + I++ + + +A LRS Sbjct: 753 HVAKDEKSVALSITFQSDTHTLKDEEINEVFENILQAIQMECDATLRS 800 >gi|283851374|ref|ZP_06368656.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] gi|283573324|gb|EFC21302.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio sp. FW1012B] Length = 801 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 238/825 (28%), Positives = 401/825 (48%), Gaps = 52/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +LSWL++ + +++ D LT +GLE+E++ N EA+ + KVL+ +PD D Sbjct: 1 MLLSLSWLREFTPYAGTPQELADRLTMLGLEIEEIKNPFEAIMGVVVGKVLTCAPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + + +VCGAPNV G L A G +P +++ KIRG ES GM+ Sbjct: 61 HLSCCTVDVGGPEVLSIVCGAPNVAAGQLVPVATVGVSLP-GGLVIKKGKIRGQESFGMI 119 Query: 119 CSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CSE EL L+++ S IM LP VG L + L L ++DVS+TPNR+DC+ V GIA + Sbjct: 120 CSESELGLAEERSGGIMVLPGTCKVGAPLPEALGLDTCVLDVSITPNRADCLSVLGIARE 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A L +S P + +E+ ++ D + C + + GV +P+ +R R Sbjct: 180 TAMAFDLPLTLPEVSYPEAGPDAGMEVAIEITDPAECPVYRAKLLSGVTVGPSPDRIRWR 239 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L A+G R IS +VD TNYV + G P H FD +++ +++ VR A GE+I LD QE Sbjct: 240 LLAIGQRPISNIVDATNYVLFELGQPLHAFDRKKLAGNLVKVRNAAEGERITTLDGQERS 299 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ +++I + ++AG++GG + + +TDVL+E A++ P I ++ + L + +++ Sbjct: 300 LTVRDLLICDAEKPVALAGVMGGAVSEMEAGSTDVLLECAVFRPGAIRKTARRLSLPSEA 359 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLS 415 YRFERGVD G + + V+L+L GG A + +A + PR I F + L Sbjct: 360 SYRFERGVDQVGSVYAMNRAVALMLETAGGMALPGVALAEPRPFMPRAIGFRPARATMLL 419 Query: 416 GIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+P + L LG + G V+ P +R D+E +ADL+EE+ R+YG+D+I Sbjct: 420 GEDMPEAFCRKTLAALGCELTGTDPTGVMVVTPPPFRLDLEREADLIEEVGRVYGLDRIA 479 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISK-EQSVLFGGGQR 529 L +V + ++ + RV A + E VN+SF+ + +L Sbjct: 480 PR---LPRVSKSLDEVPGETEFGFWARVRAYCVGVGLREAVNYSFVGHGDLDLLCLDAAC 536 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + + NP+S D + MR L PGLL + N+ + A+ +FEV+ ++ D A Sbjct: 537 RVSVANPLSEDQNVMRPMLAPGLLGSVRHNLAQGNANLRLFEVARIFTADAEAESTAREA 596 Query: 590 G----IRKGSSGIEGSGRLWSDKSEERCRFVD---LFDAKADALSVIE-PFVSLDSLRFE 641 G + G+ EG W +E + D L + L + E FV ++L+ Sbjct: 597 GRLGLVLHGARHPEG----WPWPRDEEAGYADIKGLVEGLLRHLHLPEAAFVREETLQ-- 650 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 W P + + LG G+ P + D F ++L + + Sbjct: 651 -----WLAP---QVEVRLGDKRLGLIGQVAPEVADAFHART-----ALWLAELDLDLLFA 697 Query: 702 TKT---KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKS 757 T L PV+RD+ + G ++ I+ + +DV + D ++ + Sbjct: 698 LATGYKPGFAPLPGFPPVRRDITLAAPAGVTVGAVLAAIREAKAPIFEDVQLIDAYKPED 757 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 + + + ++ + + T +D D+ D++ E + + A L Sbjct: 758 GTD--RRLTFRLTYRHAEKTLKDKDV----DKVHEGLAQAVLASL 796 >gi|311894937|dbj|BAJ27345.1| putative phenylalanyl-tRNA synthetase beta subunit [Kitasatospora setae KM-6054] Length = 836 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 259/873 (29%), Positives = 415/873 (47%), Gaps = 105/873 (12%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L GLEVE V+ + P + +VLS+E Sbjct: 1 MRVPLSWLREYVDLPAGETGRDVAARLVRAGLEVETVEQLGTDIKGPLVVGEVLSIEVLS 60 Query: 54 --RNPDLDCAILRID---TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + + TG+ QEI VCGA N VG V PG +P ++ R+ Sbjct: 61 GFKKPIRHCFVNVGNANGTGEPQEI--VCGATNFEVGDKVVVILPGGVLP-GPFPISARQ 117 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS +EL + DD I+ LP + G + L+L D ++D+++TP+R C Sbjct: 118 TYGHTSAGMICSARELGMGDDHNGIIVLPPEFEAGTDAIELLQLVDEVLDIAVTPDRGYC 177 Query: 169 IGVRGIALDLVAA-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + +RG+A + AA GL + P ++ L + D C F V GV Sbjct: 178 LSMRGVAREAAAAYGLPLADPALLDVPPANAYGYL---VKVADPVGCDRFVARTVTGVDP 234 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P W+++RL+ G+R IS VDITNYV L+ G P H +D R+ + VRRA GE Sbjct: 235 AAKSPIWLQRRLQKSGIRPISLAVDITNYVMLEVGQPLHAYDRGRVDGPIQVRRAVEGET 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGG-----------KHAGCDDNTTDVLVEV 335 + LD + LS ++++I + +AG++GG G TT+++VE Sbjct: 295 LTTLDGVQRKLSAEDLLICDNSGPIGLAGVMGGATTEILDPVVDAETGAVTGTTEIIVEA 354 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A ++PI IAR+ K + +++ RFERGVD + + V L++ + GGTA + + Sbjct: 355 AHFEPIAIARAAKRHKLPSEASKRFERGVDPEAARAAAQRAVDLLVLIAGGTA-EAGVTD 413 Query: 396 NITYKPRKIVFMNSEVK-RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 P + + +++++ R++G + E R L+ +G SV G D EV+ PSWR D+ Sbjct: 414 IAAPHPVRTIPIDADLPDRVAGAEYGRETVTRRLQEVGCSVSG-TDILEVTPPSWRPDLT 472 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL EE++R+ G D + + +P+T R LS Q R V LA +E+ + Sbjct: 473 DPYDLAEEVIRLEGYDNVPAR-MPVTP--PGRGLSEAQRFHRRVGVALAGAGYVEINAYP 529 Query: 515 FISKEQSVLFGGG-------QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 F+ ++ G G +R ++++NP++ +RT+LLPGLL A RNV R D Sbjct: 530 FVG--EAAFDGLGLDADDPRRRTVKLVNPLNDAEPALRTTLLPGLLGALRRNVGRGNTDL 587 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 AIFE V+ P+ + +A RL D+ + +L A D Sbjct: 588 AIFETGTVF---LPKAEPKVAP-------------RLPVDRRPTEEQLAELDAALPDQPR 631 Query: 628 VIEPFVSLDSLRFES-----GAPS-W---------------------------YHPGRSG 654 + V+L R S GAPS W +HPGR Sbjct: 632 RVA--VALTGERLPSGWWGKGAPSGWADAVEAARVVAAAAGVELTVRQAQYAPWHPGRCA 689 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 + E+V G+ GE HP ++ L E+ LD + + +R V S + Sbjct: 690 ELLVGDEVV-GHAGELHPRVVKALHLPERTSAMELDLDLL-FADGRRVSGPPV----SAY 743 Query: 715 PVK-RDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PV +D+A IVD + A + + +++ L++ + +FDVF G+ G GKKS+A + + Sbjct: 744 PVATQDVALIVDAGVHAADVESALRDGAGELLESLRLFDVFTGEQAGAGKKSLAYTLRFR 803 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T D+ + V ++T AVLR + Sbjct: 804 ATDRTLTADEASAAREAAVTVAGERTGAVLRGA 836 >gi|294054944|ref|YP_003548602.1| phenylalanyl-tRNA synthetase, beta subunit [Coraliomargarita akajimensis DSM 45221] gi|293614277|gb|ADE54432.1| phenylalanyl-tRNA synthetase, beta subunit [Coraliomargarita akajimensis DSM 45221] Length = 819 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 237/844 (28%), Positives = 408/844 (48%), Gaps = 67/844 (7%) Query: 1 MKFTLSWLKDHLDTDV---SLEKICDTLTSIGLEVEKVDNREALSP-----FTIVKVLSV 52 MK + +WLK+++D D + E + + L +G ++E+ E L P + +VL Sbjct: 1 MKISYNWLKNYIDLDPVEHTPEVLAEVLPLLGFDIEEY---EKLGPPQFENVVVGQVLEY 57 Query: 53 ERNPDLD---CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 +++PD D C + ++TG+ E ++VCGA N G + A PG+ +P + + K Sbjct: 58 DQHPDADRLRCCL--VNTGQEGEPHKIVCGAKNFNAGDKVMVALPGAVLP-GDFKIKKSK 114 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +RG S GMMCS KEL + D IM L + +G ++D + D + D+ +TPNR D Sbjct: 115 LRGQPSEGMMCSAKELKIGQDHDGIMILDPEVALGTPVNDLYQDGDTVFDLEITPNRVDV 174 Query: 169 IGVRGIALDLVAA-GLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + G+A +L A GL K E+ S ++ L + ++ C + C+KGV Sbjct: 175 LSHLGVARELSARFGLPVKYPEVKASTQNAANGDSLLSEVEVSAPEFCPHYTAMCIKGVN 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ ++A G RSI+ +VD+TNYV + P H FDA++I L VR A GE Sbjct: 235 VGPSPKWLKDAIEATGQRSINNVVDVTNYVLHETCQPMHAFDAAKIKGGKLVVRMAGEGE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD +E L+ + VIA R +AG++G A D+ TTDV++EVA ++P ++ Sbjct: 295 QITTLDEKERTLTAEMGVIADGERPLVVAGVMGSVDAEVDEGTTDVVLEVAYFNPTSVRA 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKI 404 + + L + +DS YR+ERGVD +G + V LIL + GGT D+ + ++ Sbjct: 355 TARKLNLSSDSSYRYERGVDPKGAVYASLRAVDLILEVAGGTVDGDMMVEGAEPATISEV 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD------KFEVSVPSWRQDVEEKAD 458 ++R G DV ++ +LE L SV +D ++ V +PS+R D++ D Sbjct: 415 ELRPDHLRRFIGFDVSDDEVQAVLESLELSV-SRHDEADGSQRWVVGIPSFRGDLQRDVD 473 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVE--DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 L+EE +R+YG D+I + ++ D R ++ + Y L + E +S Sbjct: 474 LIEEFVRVYGTDRIPESEVVARGIKENDHRIYTVNAAVADY----LTGQNFDEAFLYSLR 529 Query: 517 SKEQSVLFGGGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 E++ F G + + L + NP+ +D S++R SL+PGLL N R FE H Sbjct: 530 DPEETKFFFGEESFKVLALDNPLQSDQSHLRPSLIPGLLDVLKLNSARGTGATRFFERGH 589 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE---- 630 VY + + ++ G + + R W + D + A+ + +++E Sbjct: 590 VYREVKGKMMELISVGFVIVADQVS---REWRQR-----EVADFYTARTLSGNILEIAGQ 641 Query: 631 -----PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 + + + G + Y + E+ G + D + L+ P+ Sbjct: 642 AASKLSYQPIGECKLWQGGHAAY---AGDFTRMGFEVTCGLLNV--ATLKDRWDLATPVI 696 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR--- 742 + + P +++ K + +S+ +DLA IVD+ + AG + N + + Sbjct: 697 AGSILM--TPKFFERKAKRGRHSGVSNQPASAKDLALIVDESVLAGQVQNDVAKFAKKAA 754 Query: 743 ---LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + V VFDV+QG L EGKKS+A+ + + T +D ++ D I + + +KT+ Sbjct: 755 QGFACESVRVFDVYQGDGLPEGKKSLAVSMSFRAADRTLKDKEVNAAFDGIQKLITEKTD 814 Query: 800 AVLR 803 +R Sbjct: 815 YQIR 818 >gi|189500564|ref|YP_001960034.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobium phaeobacteroides BS1] gi|189496005|gb|ACE04553.1| phenylalanyl-tRNA synthetase, beta subunit [Chlorobium phaeobacteroides BS1] Length = 800 Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 249/839 (29%), Positives = 418/839 (49%), Gaps = 77/839 (9%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +L WLKD + + + + D LT +GLEVE V + + P +V KV V +P+ Sbjct: 1 MKISLDWLKDFIPSITADIPSLVDKLTFLGLEVEDVISGKLPDPLVVVGKVEEVREHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMI-VNVRKIRGIES 114 D + R++TG+ Q+VCGA NV G L A G+ + P+ + KIRG S Sbjct: 61 DRLKVCRVNTGEADACQIVCGASNVAEGQLVAVATIGATLHMPDGGSFKIKKSKIRGEVS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 +GM+C+ EL LS D + IM L VG L+ YL++ D ++D+S+TPNR D + G+ Sbjct: 121 SGMICAADELGLSGDHSGIMVLEEGCAVGTPLASYLKM-DTVLDISVTPNRPDVLSHLGV 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A ++ AG+ + + PLS + P + D +C + ++ V +P W+ Sbjct: 180 AREI--AGVAG---VTLPKPLSVDFSPTGPLVHIADPEVCPYYTGILIRNVTVAESPGWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++++++GLRS + +VDITN++ G P H FD + + R+ I+ ++ + Sbjct: 235 KEKIESIGLRSRNNIVDITNFILHSLGQPLHAFDLAALQGGCVQVRSDVNSSIVTINQET 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P VI + +IAG++GG + ++TTD+L+E A + P + ++ K LG+ + Sbjct: 295 CQLKPGMPVICDQEKPVAIAGVMGGNDSAVSESTTDILLESAYFSPFAVRKTSKLLGLTS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGG------TASDICIARN-ITYKPRKIVFM 407 DS YRFERG D + + V+LIL L GG A D+ +RN +T +P++ Sbjct: 355 DSAYRFERGTDPGCVRFAAECAVTLILELAGGEVVCAQEAGDLPESRNTVTLRPKR---- 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRI 466 + G + E + +LE +GFSV+ + E +PS+R DVE++ DLVEE+ R+ Sbjct: 411 ---ANEILGCSISAEKMVSMLEYVGFSVVDQQAGSVEFDIPSFRVDVEQEIDLVEEVARL 467 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFISKEQ 520 G + I + ++ S Q+R Y++ V+ E++ I++ + Sbjct: 468 EGYNAIAA--------AERMVASYPQARKHPEFFPDYLRSVMIGLQYREILTNPLITRRE 519 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEND 579 + LF + +LNPIS + +R SL+P +LK N+ D +FEV+ V Y+ + Sbjct: 520 ASLF--DHIPVPVLNPISEGLEVLRPSLVPSMLKVISHNIKHGARDMRLFEVARVFYKTE 577 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD--- 636 EG + GS R S+ S+E+ VD FD K + E LD Sbjct: 578 EVEGSLDCLKEKEVLVVALTGS-RFPSNWSQEKVD-VDFFDIKGSVEMLFERLNLLDKSA 635 Query: 637 ---------SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 S+ F+ R G +K EI L +LD F + P Sbjct: 636 LNIYNDCTLSITFDLMDKGERLKQRGGSVK---EIAL--------EVLDAFDIDQP---- 680 Query: 688 EVYLDSIPISQKKRTKTKKVVH-LSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLID 745 V++ I + T VV+ S +P V RDL+FI+ + LV+ +K+ D +I Sbjct: 681 -VFIAEIDAELLESCYTLNVVYNPPSRYPVVVRDLSFILPEGSGVQELVDCVKSSDEMIR 739 Query: 746 DVTVFDVFQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V VFD+F+ ++ GE ++SVA+ + I + T +++ ++ ++ ++ +N + AV+R Sbjct: 740 KVQVFDLFERETEPGERERSVALSLDISDTERTLKEERVKKILRKVTDNAESRLGAVIR 798 >gi|325681358|ref|ZP_08160884.1| phenylalanine--tRNA ligase, beta subunit [Ruminococcus albus 8] gi|324106848|gb|EGC01138.1| phenylalanine--tRNA ligase, beta subunit [Ruminococcus albus 8] Length = 803 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 236/843 (27%), Positives = 404/843 (47%), Gaps = 87/843 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M ++ WL D++D D+ ++ +T G +VE + + L + +V + +P+ D Sbjct: 1 MDLSMKWLADYVDCDMPIKDFVSGITLSGSKVECYNEEGDYLENVVVGQVKEIVPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTG 116 I ++D G+ +Q+V GA NV+ A S + + V + K +RG S G Sbjct: 61 HMFICQLDVGEGSLVQIVTGAQNVKKDDFVPVAKHKSTVLHDGKPVKITKGKLRGEASNG 120 Query: 117 MMCSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 M+CS EL L+ +D I+ D +G + + + +D +++ +T NR DC Sbjct: 121 MLCSLGELGLNIHDFPYAIEDGIFILGDDCDKTIGKDIREAIGFNDTVVEFEITSNRPDC 180 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + V G+A + AA GK E+ ++ P + +K + ++ LCK + VK V Sbjct: 181 MSVIGLARE-TAATFGK--ELKVAKPEFKGVYGDVNEMLKVKIHNTDLCKRYIGAIVKNV 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSG 284 + +P WMR+RL+A G+R I+ VDITNYV L+ G P H FD + + VR A +G Sbjct: 238 KIGPSPRWMRERLRASGVRPINNFVDITNYVMLEYGRPMHAFDLRYVEGAEINVRNARAG 297 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EKI LD E +LS + +VIA + ++AG++GG+++G D+TT V+ E A +D ++A Sbjct: 298 EKITTLDGIERELSEEMLVIADAKKPVAVAGVMGGEYSGIMDDTTTVVFESACFDGASVA 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRK 403 + K L + TD+ R+++G+D L L+ L G I N + P Sbjct: 358 TTAKKLRMRTDASSRYDKGLDPHECYEALMRACQLVEELGAGEVVKTVIDENYQSETPLN 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + F + G D+P + +RILE+L F+V V P +R D+ KAD+ EE+ Sbjct: 418 VEFSADWINNFLGTDIPEAEMVRILEKLEFTV----KDGRVYAPWFRVDIGCKADIAEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QS 521 RIYG + I P + + + +Q+ + VK + S + E+ +SFIS + Sbjct: 474 ARIYGYNSI---PDTIIRGVANAQRTPKQNFEKKVKAAMLSMGLNEIETFSFISPKYFDK 530 Query: 522 VLFGGGQR---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + + I+NP+ D S MRT+++P +L+ GRN + +FE+ + Y Sbjct: 531 IALPADSKLRNTVTIMNPLGEDTSVMRTTIVPSVLEVVGRNYSYRNPECYVFEMGNEYIP 590 Query: 577 ----------------ENDTPEGQK-YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 DT G Y G+ +G G+ + ++ + C F ++ Sbjct: 591 VEGEVLPTEPVRLGIGFYDTESGADFYTLKGMVEGLMNAVGAENIEYERPSDDCEFDEV- 649 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 S +HPGR ++K + G FGE HP +++ +G Sbjct: 650 --------------------------SAFHPGRCAVVKVDGRQI-GIFGELHPKVMENYG 682 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-K 738 + ++ +IP + TK L RDL+ + D+ +PA L +I K Sbjct: 683 IEARTYVAKI---NIPELMELSCDTKTYKPLPKFPATTRDLSVVCDEEVPAAVLEKLIRK 739 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 V +++ VT+FDV++G+ + GKKSV+ + ++ L+ T DD D+ +E VK+ Sbjct: 740 AVGGILESVTLFDVYRGEQIEAGKKSVSYSISMRSLEGTLTDDQ----ADKAMEKAVKEL 795 Query: 799 NAV 801 +A+ Sbjct: 796 SAI 798 >gi|163839517|ref|YP_001623922.1| phenylalanyl-tRNA synthetase subunit beta [Renibacterium salmoninarum ATCC 33209] gi|162952993|gb|ABY22508.1| phenylalanyl-tRNA synthetase beta chain [Renibacterium salmoninarum ATCC 33209] Length = 847 Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 246/825 (29%), Positives = 389/825 (47%), Gaps = 72/825 (8%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREAL--SPFTIVKVLSVERNP 56 M+ LSWL++ + D + E + L +GLE E V P + +VLS+ + P Sbjct: 1 MRIPLSWLREFAAVPADATAEDVMADLVRVGLEEEAVHRPTDFLSGPIVVGQVLSLVKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C + + G Q ++ +VCGA N G + PG+ +P Sbjct: 61 QTNGKTINWCQVRVVPEGATQTLEGDGISPDGIQGIVCGAHNFVEGDKVIVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPI 156 + ++ RK G S GM+ S +EL + D I+ L +D +G + + L L D Sbjct: 120 GDFRISPRKTYGHTSAGMIASSRELGIGQDHDGIVVLSTLGLDPELGSSVYELLGLDDHA 179 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS---CPLSSESIPLEIKFDLDDSSL 213 +V++TP+R +RGIA + A + + P S P+ L+D + Sbjct: 180 AEVNVTPDRGYAFSIRGIAREYAHATGTEFVDPAAQPTVVPADSAGFPVR----LEDGAP 235 Query: 214 CKG------FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 G F V+G+ +V P WM RL+ G+RSIS VDI+NYV + G P H Sbjct: 236 IYGKPGVDRFVARIVRGIDVSVPTPQWMASRLRLAGIRSISLPVDISNYVMWELGQPLHF 295 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 +D +++S + VRRA + E + LD + L ++++I D IAG++GG Sbjct: 296 YDLNKLSGPIVVRRAAAAESLTTLDGKARKLDVEDLLITDDSGPVGIAGVMGGAATEVSA 355 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 +T DVL+E A ++ I IARS + + +++ R+ERGVD + V L++ L GG Sbjct: 356 STQDVLIEAAHFEEITIARSRRRHKLSSEASKRYERGVDPLVADIATQRAVDLLVELAGG 415 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVS 445 TA + P+ I F+ R GI E R L +G + +G+ D + VS Sbjct: 416 TADPHGTDVFSGFTPKTIGFVAGYPARRVGIQFTDEQIERALTDIG-ATVGQSDGIYGVS 474 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 PSWR D+E K DL EEI R+ G DQI P L R LS Q + R + LA Sbjct: 475 APSWRPDLETKDDLAEEIARLVGYDQI---PATLPVAPPGRGLSRVQQQRRRTLQALADS 531 Query: 506 AMMEVVNWSFISKEQSVLFG---GGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNV 560 + EV+ + F+SK + FG GG R +++ NPIS + +RTS+LPGLL+ RN+ Sbjct: 532 GLTEVLAYPFVSKAMNNTFGVAEGGTEARAVKLANPISEEFGFLRTSVLPGLLEVAKRNL 591 Query: 561 DRAIADFAIFEVSHVY--------ENDTPEGQK-------YMAAGIRKGSSGIEGS--GR 603 R D A+FE V+ + P G + + AGI I G Sbjct: 592 SRGFRDLALFEAGSVFLPAETMGTASIPPLGARPADEVLDELYAGIPDQPLHIAAVLIGS 651 Query: 604 LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV 663 + + + R D DA D + + +D + + G +HPGR+ ++ + Sbjct: 652 DSAAAPDHKPRSWDYADA-LDVAKLAAEVLGVDIVAVQ-GRHQAFHPGRTAQLELRDGTL 709 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 LGY GE HP +L L E LD++ + K + S+ +D+A + Sbjct: 710 LGYAGELHPKLLAESDLPARTIAVEFDLDALFEAAADVIVAKSI---STFPLATQDVALV 766 Query: 724 VDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 VD +PA ++ +++ L+++V +FD ++G ++GEGKKS+A Sbjct: 767 VDAEVPASEVLEVLRTGAGELLEEVALFDDYRGHNVGEGKKSLAF 811 >gi|255594076|ref|XP_002536013.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] gi|223521192|gb|EEF26370.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] Length = 608 Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 211/634 (33%), Positives = 324/634 (51%), Gaps = 44/634 (6%) Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 MMCSEKEL L+ +SA I+ELP DAPVG + +Y +L+D + ++ LTPNRSDC+ V G+A Sbjct: 1 MMCSEKELGLAAESAGIIELPEDAPVGQDVREYFDLNDQVFELKLTPNRSDCLSVIGVAR 60 Query: 177 D---LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 D L A L + I+I+ + + ++ + C + + GV P Sbjct: 61 DVSALTGAPLSLARTIDIAVTGQQQKSVI-----VEATQACPRYCGRVINGVNAKAKTPV 115 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WMR+RL+ GLRSISA+VDITNYV L+ G P H FD +++ + VR A GE+I+ L+ Sbjct: 116 WMRRRLERSGLRSISAVVDITNYVLLEMGQPLHAFDLAKLQGDIVVRTAKQGEQIVLLNE 175 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q +L D +VIA + ++ GI+GG ++TTDV +E A + P IA + LG+ Sbjct: 176 QTAELQSDMLVIADNSGPIALGGIMGGASTAVSEDTTDVFLESAYFSPNAIAGRARRLGL 235 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV--FMNSE 410 TDS YRFERGVD L+ LIL +CGG A I ++ R V +N Sbjct: 236 STDSSYRFERGVDFAATRQCLERATQLILDICGGDAGAIT-EQSAQLPTRHAVGLRLNKA 294 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V L GI + + +L RL FS + D F V+ PS+R D+ + DL+EEI+R++G + Sbjct: 295 VDVL-GIPLTQDKVAELLSRLQFSFERQGDDFLVTPPSYRFDIAIEEDLIEEIVRLHGYE 353 Query: 471 QIKSEP------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 + + P + L E KR LS ++++L E + +SF+ Sbjct: 354 HLPALPPKTDALVMLPSDESKRGLS-------RLRQMLVDADYREAITYSFVDAAWERDL 406 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 G + + NPI+++MS MR+SL GLL A N++R A +FEV + D + Sbjct: 407 MGNDAAIPLRNPIASNMSVMRSSLWGGLLDALQYNLNRTQARVRLFEVGACFYQDGASYR 466 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + G G+ G + ++ E R VD FD K D +E V ++ F+ Sbjct: 467 EITRVG------GL-CYGDAYPEQWGEAARSVDFFDVKTD----VEALVGAGAV-FKPAQ 514 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HPG++ + + + G+ G HP + + FE+ LD++ Sbjct: 515 HPALHPGQTAQVWLNGRAI-GWIGTLHPRWQQHYDFPRGVMLFELELDAL-----NSKAV 568 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 K V +S +RDLA +VD++IP +++ + Sbjct: 569 PKYVEISKFPTTRRDLAVVVDENIPVQDMLDAMH 602 >gi|315604500|ref|ZP_07879564.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 180 str. F0310] gi|315313784|gb|EFU61837.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 180 str. F0310] Length = 882 Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 261/895 (29%), Positives = 422/895 (47%), Gaps = 111/895 (12%) Query: 4 TLSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCA 61 TLSWL DH+D E + L +GLE E++ + + P + +VL+ + Sbjct: 5 TLSWLADHVDVAEGTDAEALAAALVKVGLEEEEIHPAQVVGPLVVGRVLARTEETASNGK 64 Query: 62 IL---RIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 ++ R+D G++ + ++CGA N VG L V + PG+ +P N + Sbjct: 65 VVNYCRVDVGEYNDAPGTGKEPSDLPSRGIICGAHNFDVGDLVVVSLPGAVLP-GNFQIA 123 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPID------APVGGRLSDYLELSDPIIDV 159 RK G S GM+CS +EL L +D + I+ LP PVG + +L L + ++++ Sbjct: 124 ARKTYGHVSDGMICSARELGLGEDHSGIIVLPKFFPDREIPPVGTDIVSWLGLGEEVLEI 183 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINI-----SCPLSSESIPLEIKFDLDDSSL- 213 ++TP+R C +RGIA + A ++ + SCP + + F DD+ + Sbjct: 184 NVTPDRGYCFSMRGIAREYSHATGAAFRDPGLPGVIASCPPVANDEGFPVVF-CDDAPIR 242 Query: 214 ----CKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 F V+G + + P WM +RL+A G+RS+S VDITNYV LD G P H +D Sbjct: 243 ARLGVDRFVARVVRGTNPSASTPRWMVERLEAAGMRSVSLAVDITNYVMLDLGQPMHAYD 302 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQSIAGIIGGKHAG 323 ++ + VRRA +GE ++ LD ++ +L +++I A RI IAG++GG ++ Sbjct: 303 LGALAAPIVVRRARAGETLVTLDEEKRELDEQDLLITDSPHAQGSRIIGIAGVMGGAYSE 362 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL--KHIVSLIL 381 ++TTD+L E A +D ++IARS + + +++ RFERG D +P L + V L++ Sbjct: 363 VGESTTDILFEAAHFDAVSIARSSRRHKLHSEAAKRFERGTDP--ALPALAAQRAVELMI 420 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD- 440 GG + P +IV E +RL+G+ E +L +G V D Sbjct: 421 RYGGGNVDPGVTDNDQRPDPVRIVLPMGEAERLTGVSHSPERIAELLRAVGCVVDEPRDG 480 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 +V+ PSWR D+ ADLVEEI R+ G D I P+ L L+L Q R Sbjct: 481 AIKVTAPSWRPDLTMPADLVEEIARLDGYDNI---PVILPSAPAGIGLTLAQKARRLSAA 537 Query: 501 VLASRAMMEVVNWSFIS---KEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKAT 556 LA ++EV ++ F+ Q + +R L + NP++ D +RTS+L LL Sbjct: 538 ALAEGGLVEVESYPFVCDTWDRQGIASSDPRRSALRLRNPMADDSPWLRTSVLDTLLDVA 597 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEG---------------------------QKYMAA 589 GRNV R+ AD AIFEV+ V + P+G Q + Sbjct: 598 GRNVARSNADVAIFEVAKVAQ---PQGTVPAELPGADQRPSDEVLAALEAGIPAQPWHIG 654 Query: 590 GIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 G+ G+ SG+ R W+D + E R V A+ + V ++S GA Sbjct: 655 GVLTGNAQRSGVLSQARAFDWAD-ALEYVRSV----ARGLGVRVEVTRAWVESPAAHKGA 709 Query: 645 P-----------SWYHPGRSG--IIKTSAEIV-LGYFGEFHPNILDFFGLSNPICGFEVY 690 P + +HPGR ++ ++V + GE P FGL C FE+ Sbjct: 710 PMPTPATDPARVAPFHPGRVARVFVRAGRDLVDVALAGELSPAACRAFGLPARSCAFEID 769 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTV 749 +D++ I Q T+ +V +S+ K D+A +V IP + +++ L + VT+ Sbjct: 770 MDAL-IGQMS-TEPIQVKGVSTYPLAKEDIALVVPADIPVARVEQVVRQGAAPLAEAVTL 827 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD+++G + G +S+A V ++ T + + +R+V K A LR+ Sbjct: 828 FDMYEGDQVPSGYRSLAFAVRLRASDHTLTAKESAQVRERVVAKASKVLGASLRA 882 >gi|295133060|ref|YP_003583736.1| phenylalanyl-tRNA synthetase subunit beta [Zunongwangia profunda SM-A87] gi|294981075|gb|ADF51540.1| phenylalanyl-tRNA synthetase subunit beta [Zunongwangia profunda SM-A87] Length = 808 Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 244/839 (29%), Positives = 407/839 (48%), Gaps = 67/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + EK + LT +GLEVE + + ++ L + VLS E++P Sbjct: 1 MKISYNWLKQFIKLPEDAEKTGELLTDLGLEVEGIHSFQSVKGGLEGIVVGHVLSCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + +++ G +E+Q+VCGAPN+ G A G+ + + + KIRG Sbjct: 61 NADKLNLTKVNIGNGEEVQIVCGAPNIAAGQKVPVATIGTVLYDEKGEEWQIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+CSEKE+ + IM + D G +++ E+ +D + ++ LTPNR+D +G Sbjct: 121 SSFGMICSEKEIGIGSSHEGIMVMEDDLIPGTPVAEIFEVENDKVFEIGLTPNRADAMGH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + K + + P S +S L I ++DSSL + + V+ Sbjct: 181 WGVARDLKAGYQQQSKSLELITPSVSNFHVDSRSLRIPIFVEDSSLAPRYCGITLSDVKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RLKA+GL + +VD+TNYV + G P H FDA++I+ + + V+ +G K Sbjct: 241 QESPKWLQNRLKAIGLTPKNNIVDVTNYVMHELGQPLHAFDAAKITGNEIHVKTLETGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E +L ++++I + IAG+ GG ++G NT V +E A ++P+++ ++ Sbjct: 301 FTTLDEVERELHEEDLMICDKEKPLCIAGVFGGLNSGVSQNTNQVFLESAYFNPVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI- 404 K G+ TD+ +RFERG+D LK LI L GG SDI P+KI Sbjct: 361 AKRHGLNTDASFRFERGIDPSITEYALKRAALLITELAGGEITSDID-----DLYPKKIE 415 Query: 405 ---VFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+ E V +L G ++ E IL L V + +++PS+R DV+ ++D+ Sbjct: 416 DFQVFLTFEKVNKLIGENLEEETIKSILASLEIRVNNVTETGMGLTIPSYRVDVQRESDV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EEILR+YG + IK + +K N S+ S +++ L + ++V F Sbjct: 476 IEEILRVYGYNNIK--------INEKFNASVSIS-SKFEDYKLQNIIANQLVGQGFYETM 526 Query: 520 QSVLFGGGQREL----------EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 + L EL E+LNP+S+D+S MR S+L L++ N++R D + Sbjct: 527 ANSLTMPSHIELSEQLKSEYNVEMLNPLSSDLSVMRQSMLFSGLESIRYNLNRKRRDLKL 586 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGI----EGSGRLWSDKSEERCRFVDLFDAKADA 625 FE Y Y++ + I SG W+ ++ F Sbjct: 587 FEFGKTY-------HSYVSGRVENKHLSIFVSGNQSGESWNSAGQKGTFFY--------L 631 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 VIE S++ A S G++ +SA+ L FG +IL F + + Sbjct: 632 KGVIEVIFQRLSIKNLKAAASKNDVFAEGLMLSSAKAKLVEFGVVKKSILKHFDVDQEVL 691 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 + D++ + + ++ K V + V+RD A ++D+ + + I + +L+ Sbjct: 692 FADFNWDAVI--EIAKAQSNKFVGIPKYPEVRRDFALLLDETVSYAEIETIAAQTEKKLL 749 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FDV+QG +L EGKKS A+ Q T D I +M ++ + A LR Sbjct: 750 KEVNLFDVYQGDNLPEGKKSYAVSFTFQDENKTMTDKQIDKIMSKLQYRFENELKAELR 808 >gi|307565430|ref|ZP_07627919.1| phenylalanine--tRNA ligase, beta subunit [Prevotella amnii CRIS 21A-A] gi|307345880|gb|EFN91228.1| phenylalanine--tRNA ligase, beta subunit [Prevotella amnii CRIS 21A-A] Length = 822 Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 238/839 (28%), Positives = 412/839 (49%), Gaps = 53/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEV---EKVDN-REALSPFTIVKVLSVERNP 56 MK + WLK ++D ++ + + + LTS GLEV E+V+ R L + KVL+ E +P Sbjct: 1 MKISYKWLKQYVDFSLTPKHLAEALTSTGLEVGSLEEVETVRGGLKGLFVGKVLTCEDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN--MIVNVRKIRGIE 113 + D I +D G+ + Q+VCGAPNV G + A G + + + ++ K+RG++ Sbjct: 61 NSDHLHITTVDLGRGEAQQIVCGAPNVAAGQKVIVADLGCVLYDGDKEFVIKKSKLRGVD 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP +A VG ++Y +L SD + D+ +T NR+D + Sbjct: 121 SFGMICAEDEIGVGKSHDGIIVLPEEAIVGMPAAEYYQLDSDWVFDIDITANRADALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A E ++ P ++ L IK ++++S C+ +A + G Sbjct: 181 GVARDLYAWLRQNGYETSLHRPSCDDFHVDNNNLPIKVTIENTSACRRYACLSITGCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ +L +GLR I+ +VDITNY+ G P H FDA + + + VR G++ Sbjct: 241 ESPKWLQDKLSVIGLRPINNIVDITNYIMWAYGQPMHCFDADMVKGNHIIVRDKNEGKRF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ L ++ I ++ IAG+ GGK +G + T +V++E A + P I +S Sbjct: 301 VTLDGEEHILGKHDLAICNEEEPMCIAGVFGGKGSGTYETTKNVVLESAYFHPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DIC--IARNITYKPRKI 404 + G+ TD+ +RFERGVD G+I LK L L GG S +IC I P ++ Sbjct: 361 RRHGLSTDASFRFERGVDPNGIIYALKQAAILCQQLAGGKVSMEICDEYPSPIADFPVRL 420 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEI 463 F + RL G + + I+ L + E + ++ VP++R DV+ D+VE+I Sbjct: 421 NFEYCD--RLIGKQIGVSTIKSIVTSLEMKIENEDEHGIDLLVPAYRVDVQRPCDVVEDI 478 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 LRIYG + ++ + + + R V L E++N S ++ Sbjct: 479 LRIYGYNNVEIPTMLKSSLTIAEEADKDYHRENIVSEQLVGAGFSEILNNSLT---KTSY 535 Query: 524 FGGG-------QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G + ++++NP+SAD+ MR +LL G L++ N++R + FE ++Y Sbjct: 536 YDHGKWNKYTWEETVKVMNPLSADLGVMRQTLLFGGLESLAYNINRKATNLRFFETGNIY 595 Query: 577 EN-------DTP---EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 + D P Q++ A G +EGS W+ E+ ++ KA Sbjct: 596 KFSQDRYSLDNPVRAYSQEHHFALWVTGKH-VEGS---WAHPDEDS----SFYELKAYVE 647 Query: 627 SVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +++ V +L E + + ++ +KT ++ G +L + + Sbjct: 648 NILRRVGVRQGALVSEHSDNNIF--DKAIALKTRNGKIIAELGILSIALLKRMDIGQKV- 704 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 F ++ + + R + LS V RDLA ++D I + I + + +L+ Sbjct: 705 -FYAEINWEELMKVVRKNNLQYEELSKYPAVSRDLALLLDNKIEFVQIEEIARQTEKKLL 763 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV+QGK+L GKKS A+ ++Q T D I +M ++++N+ K A LR Sbjct: 764 KKVELFDVYQGKNLPVGKKSYAVNFILQDTTKTLNDKAIDAIMQKLIKNLTIKLGAELR 822 >gi|154509122|ref|ZP_02044764.1| hypothetical protein ACTODO_01641 [Actinomyces odontolyticus ATCC 17982] gi|153798756|gb|EDN81176.1| hypothetical protein ACTODO_01641 [Actinomyces odontolyticus ATCC 17982] Length = 888 Score = 310 bits (795), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 254/890 (28%), Positives = 411/890 (46%), Gaps = 103/890 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 LSWL DH+D + + L +GLE E++ P + +VL+ + I Sbjct: 12 LSWLSDHVDVPEGTDAQALAAALVKVGLEEEEIHPARVTGPLVVGRVLTRVEETASNGKI 71 Query: 63 L---RIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + R+D G++ + ++CGA N V L V + PG+ +P + + Sbjct: 72 VNYCRVDVGEYNDAPGTGKEPSDLPSRGIICGAHNFDVDDLVVVSLPGAILP-GDFQIAA 130 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP------VGGRLSDYLELSDPIIDVS 160 RK G S GM+CS +EL L +D I+ LP P VG + +L L + +++++ Sbjct: 131 RKTYGHVSDGMICSARELGLGEDHDGIIVLPKYFPDREIPAVGTDIVTWLGLGEEVLEIN 190 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDSSLCK 215 +TP+R C +RGIA + + ++ + +++E P D D + + Sbjct: 191 VTPDRGYCFSIRGIAREYSHSTGASFRDPGLPGVIAAE--PPTANSDGFPVVFSDDAPIR 248 Query: 216 G------FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 G F V+G N P WM +RL+A G+RS+S VDITNYV LD G P H +D Sbjct: 249 GRVGVDRFVARIVRGTNPNAPTPRWMVERLEAAGMRSLSLAVDITNYVMLDLGQPMHAYD 308 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQSIAGIIGGKHAG 323 ++ + VRRA +GE ++ LD ++ +L P +++I RI IAG++GG ++ Sbjct: 309 LGALAAPIVVRRARAGETLVTLDEEKRELDPQDLLITDSPEGEGSRIIGIAGVMGGAYSE 368 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 + TTDVL E A +D +++ARS + + +++ RFERG D Q + V L+L Sbjct: 369 VGEGTTDVLFEAAHFDSVSVARSSRRHKLHSEAAKRFERGTDPQLPAVAAQRAVELLLEY 428 Query: 384 CGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKF 442 GGT + K I EV+RL+G+ E +L +G V G + F Sbjct: 429 GGGTVDAGVTDVDQRGKAVVISLPVGEVERLTGVAHAPERIAELLRTVGCVVEGPDNGAF 488 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V+ PSWR D+ ADLVEE+ R+ G D I P+ + L++ Q R L Sbjct: 489 TVTAPSWRPDLTLPADLVEEVARLDGYDNI---PVVIPTAPAGHGLTVAQKARRLAAATL 545 Query: 503 ASRAMMEVVNWSFIS---KEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGR 558 A ++EV ++ F+S Q + +RE L + NP++ D +RT++L LL GR Sbjct: 546 ADGGLVEVESYPFVSDTWDRQGIPADDPRREALRLRNPMADDAPWLRTTVLDTLLDVAGR 605 Query: 559 NVDRAIADFAIFEVSHVYE------NDTPE------------------GQKYMAAGIRKG 594 NV R+ AD AIFEV+ V D P Q + G+ G Sbjct: 606 NVSRSNADVAIFEVAKVARPVGTVPADLPSAEERPSDEVIAALEAGIPAQPWHIGGVLTG 665 Query: 595 S---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP---- 645 +G+ + R W+D E R + + +D GAP Sbjct: 666 QAVPAGVLANARAYDWADALEYVRRVASGLGVRVEVTRAW-----MDEAPAHKGAPMPAP 720 Query: 646 -------SWYHPGRSG--IIKTSAEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + +HPGR ++ ++V + GE P FGL C FE+ +D++ Sbjct: 721 ATDPAAVAPFHPGRVARVFVRAGRDLVDVALAGELSPTACRAFGLPARSCAFEIDMDAL- 779 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQ 754 ISQ +V +S+ K D+A +V IPA + I++ +L + VT+FD+++ Sbjct: 780 ISQMSEAPI-QVKGVSTFPLAKEDIALVVPSDIPASRVEQIVRQGAGQLAESVTLFDIYE 838 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G + EG +S+A + ++ T + + +++V K A LR+ Sbjct: 839 GDQVPEGHRSLAFALRLRAADHTLTAKESSQVREQVVAKAAKVLGASLRA 888 >gi|27262364|gb|AAN87463.1| Phenylalanyl-tRNA synthetase beta chain [Heliobacillus mobilis] Length = 819 Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 236/843 (27%), Positives = 424/843 (50%), Gaps = 64/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ +L WL ++++ + + + LT G+ VE + R+A L + + +E++P+ D Sbjct: 1 MRVSLEWLGEYVNPGMEAADLGEKLTRSGIAVENILRRDARLDQVVVGHIDVIEKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++TG Q VV GA NVR G A PG+ +P+ I RGI+S+GM+ Sbjct: 61 RLWVCSVNTGDRQ-YTVVTGAQNVRQGHKVPVALPGAKLPKGVEIGEA-AFRGIKSSGML 118 Query: 119 CSEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L + D I+ L DA VG ++ L L PI+++ LTPNR+DC+ V Sbjct: 119 CSAEELALEEKTISPEDREGILILDKDAQVGQPIAQALGLDVPILELELTPNRADCLAVI 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A ++ A L+ ++ E E +K ++DS LC +A +R +P Sbjct: 179 NVAREVSAITGQPLQLPDVKVVEKGEGRTEEQVKVTIEDSDLCGRYAARLFTNLRPGPSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM++RL+A G+R I+ +VDITNYV L+ +P H FD + D + VRRA +GEK++ L Sbjct: 239 LWMQRRLQAAGMRPINNIVDITNYVMLEMNHPLHAFDYHTVKDGHIVVRRARTGEKLVTL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE +L+ +N+VIA + ++AG++GG + TT +L+E A + P ++ R+ + + Sbjct: 299 DGQERELNSENLVIADPEKAIALAGVMGGLETEITEKTTTILLEAAHFYPASVRRTARQV 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY----KPRKIVF 406 G+ +++ RFE+GV++ + + L+ L +D+ Y +P K+ F Sbjct: 359 GLRSEASQRFEKGVNINTVKLAMDRAAELVAQLG---VADVVPGYVDNYLRPTEPVKVPF 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-------DKFEVSVPSWRQDVEEKADL 459 S + L G + E I +RL F V E D V P++R D++ + DL Sbjct: 416 RASRINALLGTTIKPEQMEDIFQRLQFPVQWEAATEGEQRDAGIVVAPTYRPDIQGEHDL 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EE+ R+YG D+I + LP + + Q R + + ++ S EVV +SFI+ Sbjct: 476 AEEVARLYGYDRIPTT-LPQGKTTVGQRTWPQTVREKIIDALVGS-GFREVVTFSFINPR 533 Query: 520 Q----SVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 ++ R+ + + NP+S + +R +++PGLL+ RN R I D AIFE+ Sbjct: 534 HLDRLAIPAEDHLRQVIPVQNPLSEEQGILRPTIIPGLLELAARNASRRIPDLAIFELGG 593 Query: 575 VY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 + + P+ + + + + G++ + WS K + D + K + Sbjct: 594 TFLPKALPLKELPD-EAWKVSALVMGAAPVH-----WSGKPQP----YDFYFLKG----I 639 Query: 629 IEPFVSLDSLRFESGAP----SWYHPGRSGIIKTSAEIV---LGYFGEFHPNILDFFGLS 681 +E +S ++ + + S+ HPGR+ ++ + + + LGY GE HP++ + + L+ Sbjct: 640 VEKLLSALKIKGVTWSRETELSYLHPGRAARLQITQDGMVFDLGYMGEVHPDVREAYDLA 699 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV- 740 E+ L ++ + + + + + S RD+A ++ +PAG + +I V Sbjct: 700 ARPVVMELDLSALTLLARAKGDYRPLHRFPS---TDRDMAMVLPVAVPAGQVEAVIAEVG 756 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 L++ +FDV+QG + G +S+A + Q T D+++ + I ++++ A Sbjct: 757 GNLLERWRLFDVYQGNQISAGFRSLAYTLRYQAPDRTLTDEEVNHAHESIKTALMERLGA 816 Query: 801 VLR 803 R Sbjct: 817 QFR 819 >gi|310658447|ref|YP_003936168.1| phenylalanine tRNA synthetase subunit beta [Clostridium sticklandii DSM 519] gi|308825225|emb|CBH21263.1| phenylalanine tRNA synthetase, beta subunit [Clostridium sticklandii] Length = 788 Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 245/826 (29%), Positives = 413/826 (50%), Gaps = 63/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK L WLK ++D DV ++ D +T G +VE + E +S I K+ S+ +PD D Sbjct: 1 MKAPLKWLKKYVDIDVDVKSFSDAMTMSGTKVEGYEEVGEDISNVVIGKITSITPHPDAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I+ +IDTG E+Q+V GA NV VG + A GS +P + + K+RG S GM+ Sbjct: 61 KLIITKIDTGS-SEVQIVTGAKNVSVGDIIPVALHGSTLP-GGIKIKKGKLRGEVSEGML 118 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + + I+ L + +G + L L+D I++ LT NR DC + Sbjct: 119 CSAIELGIDEKYVDIESRDGILLLRGEYTLGDDVRRALLLNDYIVEFELTSNRPDCQSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A + V+A L K ++ P S ++I E+K + D LC F + +K + Sbjct: 179 GLAHE-VSATLDK----DVKLPESDFREIDKAIEYEVK--VLDKDLCPRFIIREIKDIEI 231 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P +M++ L G+R I+ +VDITN+V L+ G P H +DAS++S ++RA + Sbjct: 232 KPSPYFMQRCLIESGIRPINNIVDITNFVMLEYGQPLHAYDASKLSTKEFVIKRASDNDS 291 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD+ E L + ++I + IAG++GG+++ D TT +++E A ++ NI + Sbjct: 292 FYTLDDLERKLDSEMLMITDGQKNIGIAGVMGGQNSDVSDTTTHIVLESANFNADNIRHT 351 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG---TASDICIARNITYKPRK 403 K L + T++ RFE+G+DL + LI G + + I K Sbjct: 352 SKKLNLRTEASARFEKGIDLSRAEEAINRACHLIDYYGYGKVLSGKKDTLENEIEVKT-- 409 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 +V + +L G + E IL +L F + + + VP +R D++ +AD+VEEI Sbjct: 410 VVVSIDRINKLLGEKLSPEKMSEILSKLKFKTEIQGNNLSIEVPEFRLDIDMEADIVEEI 469 Query: 464 LRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 R+YG + I S+ + LT + + Y+K + S + EV+ +SF+S Sbjct: 470 ARLYGYNNILSQNIVGELTSGVKTEDRIFED----YIKDAMMSNGLTEVLTYSFVSPTSL 525 Query: 522 VLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-D 579 G ++++NP+ + S MRTSL+P +L RN+ R + F+ FEV +++ N D Sbjct: 526 EKIGENLSNAVKLINPLGEETSVMRTSLVPAMLDILSRNLSRKVDFFSGFEVGNIFSNPD 585 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P ++ + AG+ EE D F K+ V++ ++ ++S Sbjct: 586 APVQKRAIVAGVY---------------GKEE-----DFFTMKSRLEGVLD-YIGIESRS 624 Query: 640 FESGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ + + YHP R I + E + G+ GE HP I + F + + F + D I Sbjct: 625 YQPFSENELYHPMRCAQISSGDEQI-GFIGEVHPLIAEKFDIKKRVYLFTLDFD---IIS 680 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKS 757 RTK K + +KRD+A +V + I G++ N II + LI+ V +FD++ G Sbjct: 681 GIRTKLKLYKQVPKFPAIKRDIALVVSEEIAVGSIENLIISKGNSLIEKVELFDIYMGDQ 740 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +GKKSVA + + L T D++I ++ +I+ ++ + A LR Sbjct: 741 VPKGKKSVAYGITYRALDRTLTDEEINLVQSKILTHLADELGAHLR 786 >gi|281423167|ref|ZP_06254080.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella oris F0302] gi|281402503|gb|EFB33334.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella oris F0302] Length = 822 Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 247/850 (29%), Positives = 412/850 (48%), Gaps = 75/850 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + WLK+++D D++ ++ D LTSIGLEV+ ++ + L + KVL+ +P Sbjct: 1 MNISYKWLKEYVDFDLTPQETADALTSIGLEVDALEEVQTVKGGLKGLYVGKVLTCVEHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + +D GK + Q+VCGAPNV G + A G + E + + K+RG+E Sbjct: 61 NSDHLHVTTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGEESFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP DA VG ++Y L SD +I++ +T N D + Sbjct: 121 SLGMICAEDEIGVGNSHDGIIVLPEDAVVGMPAAEYYHLESDWLIEIDITANHGDALSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A D A + ++ P + +E +P+E+ ++ ++ CK +A V G Sbjct: 181 GVARDFYAWLKQNGYQTSLHRPSCDAFKVDNEDLPIEV--EIQNTDACKRYACVSVTGCD 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ +L+ +G R ++ +VDITNYV + G P H FDA + + VR G Sbjct: 239 VKESPAWLQDKLRLIGQRPVNNIVDITNYVMMAYGQPMHCFDADMVKGHKIVVRTQPEGT 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K + LD +E+ L ++ I + IAG+ GGK +G D T +V++E AL+ P I + Sbjct: 299 KFVTLDGEEHTLCERDLSICNAEEPMCIAGVFGGKGSGTYDTTCNVVLESALFHPTWIRK 358 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---R 402 S + G+ TD+ YRFERGVD G+I LK L L GG S +++ +P Sbjct: 359 SARRHGLSTDASYRFERGVDPNGVIYALKQAAILCKELAGGKVS--MQIKDVYPEPIEDF 416 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVE 461 K+ V +L G ++ E I+ L + E D E+ VP +R DV+ D+VE Sbjct: 417 KVSLSYDYVHKLIGKEIGKETIKSIVTNLEMKIADETEDSIELLVPPYRSDVQRPCDVVE 476 Query: 462 EILRIYGVDQIK-----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 +ILRIYG + ++ + L + EDK++ + + L E++N S Sbjct: 477 DILRIYGYNNVEIPTQLNSSLTIAGDEDKKH-----RLSNLIGEQLVGCGFNEIMNNSLS 531 Query: 517 SKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F ++++NP+S D+S MR +LL G L++ RNV+R + FE+ Sbjct: 532 KLSYYTDFDLNAYTEDTTVKVMNPLSVDLSVMRQTLLFGGLESVVRNVNRRNNNIRFFEM 591 Query: 573 SHVYENDTPEGQKYMAAGIRKG------------SSGIEGSGRLWSDKSEERCRFVDLFD 620 +VY T +K+ A K +EGS W E+ ++ Sbjct: 592 GNVY---TYNKEKWQAENPAKAYFEDQHLALWLTGKRVEGS---WIHADED----ASFYE 641 Query: 621 AKADALSVIE----PFVSLDSLRFESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 KA ++ P + E+ A + + R G K AE+ G P + Sbjct: 642 LKAYVQNIFTRVGVPTGMFVITKSENNIFAKALAYKNRGG--KLFAEV-----GILSPKL 694 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 L G+ + F +D +++ R + +S V RDLA ++D++I + Sbjct: 695 LKKVGIEQSV--FYAEIDWDALTKAVRKNELEFEEISKFPAVSRDLALLIDKNIEFEQIE 752 Query: 735 NI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I ++ +L+ V +FDV++GK+L GKKS A+ ++Q T D I +M ++++ Sbjct: 753 QIAVQTEKKLLKRVELFDVYEGKNLPAGKKSYAVNFILQDANKTLNDKAIDAIMQKLIKQ 812 Query: 794 VVKKTNAVLR 803 + K A LR Sbjct: 813 LTTKLGAELR 822 >gi|256847487|ref|ZP_05552933.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus coleohominis 101-4-CHN] gi|256716151|gb|EEU31126.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus coleohominis 101-4-CHN] Length = 809 Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 236/838 (28%), Positives = 407/838 (48%), Gaps = 64/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK---VLSVER--- 54 MK + WL +L ++ KI + L VD SP +K V VE Sbjct: 1 MKVSYQWLNKYLP--LAQNKIKPAALAEKLARTSVDINAVYSPSDGLKKIIVGYVEECVP 58 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D ++ ++ + IQ+VCGAPNV+ G + A G+ I +N+ + KIRG E Sbjct: 59 HPDSDHMSVCQVKISDDETIQIVCGAPNVQAGKKVIVALHGARIA-DNVKIKRGKIRGEE 117 Query: 114 STGMMCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 S GM+C+ +E+ S+ A I LP DA +G + YL + D I+D +TPNR D Sbjct: 118 SDGMLCALQEIGFSEKVAPKDYEDGIWFLPDDAKIGESVFPYLGMDDTIVDTDVTPNRGD 177 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE----------IKFDLDDSSLCKGF 217 + + G DL A P ES ++ I ++ D + + Sbjct: 178 MLSIYGNVNDLAAI---------YDLPNGFESHAVKENDDAKAADLISAEVADDQMAPVY 228 Query: 218 AMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVL 276 + +K V+ +P W++ RL G+R I+ +VDITNY+ L G P H FD ++ S + Sbjct: 229 KLRVIKNVQIADSPMWLQIRLWNSGIRPINNVVDITNYILLKYGQPLHSFDYDKLPSHKI 288 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VR A E + LD +E L ++V+ + + ++AG +GG+ DD TT+V++E A Sbjct: 289 LVRHANEDETMTTLDGEEQTLKAQDIVVTAGDQPVALAGTMGGESTKVDDQTTNVVLESA 348 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIAR 395 ++DP+ + + + L + ++S RFERG++ + + L + L G + I + Sbjct: 349 IFDPVMVRKQARRLDLHSESSMRFERGINPETVERALDEAAYWLQKLANGQVTKGIVVGH 408 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVE 454 + Y +I +VK + GID+ +E I +RL F + D V+VP+ R D+ Sbjct: 409 DQQYPAHEITLSLQKVKHVLGIDIDMEQVKAIFDRLAFETTQKDEDTLVVNVPARRWDIS 468 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 ADL EEI R+YG D I S LP+ + L+ +Q + R + VL + + +++S Sbjct: 469 LPADLYEEIARLYGYDNIPST-LPV-MTRNWGGLTTRQKKLRASRHVLEGMGLNQAISYS 526 Query: 515 FISKEQSVLFG---GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + +++ FG +++ P+S+D R S++ GLL N R +++ A++E Sbjct: 527 LTTVDKAKQFGVTPSTTEPMKLDYPMSSDHVATRMSIISGLLNDIAYNEARKVSNVALYE 586 Query: 572 VSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 V+ + PE Q+++A I +G L +D ++ R VD + K Sbjct: 587 QGRVFIPKGGERPEEQEHVAGAI---------TGSLVADSWNQKARPVDFYQIKGIVEQY 637 Query: 629 IEPFVSLDSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 ++ ++ F + P HPGR+ I E V+G+ GE HPN+ + +S Sbjct: 638 LDNLAVAGTITFVADQSRPE-MHPGRTANILLDGE-VIGFIGEVHPNVAKEYKISETYV- 694 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLID 745 FE+ L+++ + + K H+S + RD+A +VD + +V IIK + Sbjct: 695 FEINLEAVLAAD---VRDKHYQHISKYPEITRDIALLVDDTVTNDEVVAIIKRRGGAFLK 751 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +FDV+ G L +GKKS+A + Q + T +++ + +I +++ ++ A +R Sbjct: 752 HIHLFDVYTGVHLPKGKKSLAYTLTYQDDQGTLKEETVNQAFAKIEKHLTEELGAEIR 809 >gi|163846459|ref|YP_001634503.1| phenylalanyl-tRNA synthetase subunit beta [Chloroflexus aurantiacus J-10-fl] gi|222524234|ref|YP_002568705.1| phenylalanyl-tRNA synthetase subunit beta [Chloroflexus sp. Y-400-fl] gi|163667748|gb|ABY34114.1| phenylalanyl-tRNA synthetase, beta subunit [Chloroflexus aurantiacus J-10-fl] gi|222448113|gb|ACM52379.1| phenylalanyl-tRNA synthetase, beta subunit [Chloroflexus sp. Y-400-fl] Length = 860 Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 249/879 (28%), Positives = 427/879 (48%), Gaps = 94/879 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN---REALSPF-----TIVKVLSV 52 M+ LSWL++ + D+ +E++ LT G+EV ++ A P+ + VL V Sbjct: 1 MRVPLSWLREFVTIDLPVEELARRLTFGGMEVAQIHRIGVEGAPLPWDPELIVVANVLEV 60 Query: 53 ERNPDLDCAILR-IDTGKHQEIQVVCGAPNV---------RVGLLGVWAPPGSCI----P 98 +P+ D +L +D G Q VV GAPN+ L V+A G+ + Sbjct: 61 RSHPNADRLVLADVDYGAAQPHTVVTGAPNLFQYRDQGRLTHPLKAVFAREGAQLYDGHA 120 Query: 99 ENNMIVNV--RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI 156 E +I + R +RG+ S M+CSEKEL LS+D I+ LP DAPVG L DYL + + Sbjct: 121 EGWVITKLKGRPVRGVMSDAMLCSEKELGLSEDHEGILILPDDAPVGMPLRDYL--GEVV 178 Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 +++ LTPN + C+ + G+A ++ A L + S+ + LC Sbjct: 179 LEIDLTPNFARCLSIVGVAREVAALTGAPLHIPEPQVEATGPSLIGRAAVTVLTPDLCPR 238 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV- 275 F + +GV+ +P WM++RL G+R I+ +VDI+NYV L+ G P+H FDA R+++ Sbjct: 239 FMVGLAEGVKIGPSPFWMQRRLINAGMRPINNIVDISNYVMLEWGQPTHAFDADRVANRH 298 Query: 276 LTVRRACSGEKILALDNQEYDLSPDN--------VVIASDGRIQSIAGIIGGKHAGCDDN 327 L VR A GE++ LDN++ DL+P + +++ + ++AG++GG + + Sbjct: 299 LIVRLAQPGERLTTLDNRDRDLTPGDESGLTHPPLLVCDETGPLAVAGVMGGASSEVSEA 358 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TT+VL+E A+W+P+ I R+ + L + +++ RFERGVD + L+ + L+ G T Sbjct: 359 TTNVLLEAAIWEPVQIRRTARGLKLPSEASRRFERGVDYELPPIALRRCLELMRLYAGAT 418 Query: 388 -ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-------SVIGEY 439 A+D + ++ I SEV+RL GI + +L RLGF + +G++ Sbjct: 419 IAADFIDVYSRPWQSVTIDLPPSEVRRLLGIHLDSHTIADMLSRLGFECTVVGSATVGDF 478 Query: 440 DKF------EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE------PLPLTQVEDKRN 487 V VPS+RQDV ADL EEI RIYG D+I P P TQ R Sbjct: 479 AMLAVEPTVRVKVPSFRQDVTMTADLCEEIARIYGYDRIPDTRLADELPPPATQ----RA 534 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ----RELEILNPISADMSN 543 + L++ V+ ++A + E++ +S I E + R L++ NP + + Sbjct: 535 IELEEQ----VRDLMAGAGLTELITYSLIDMELVARVHPSEAIADRYLKLSNPSTPEHVY 590 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ--KYMAAGIRKGSSGIEGS 601 +R SLLP + A N+ R +FE+ VY GQ +++ R+ + + G Sbjct: 591 LRRSLLPSIAAALAMNL-RERERSTVFEIGRVYLPLAQPGQDDRWLPDEPRRLAIALAGP 649 Query: 602 GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP----SWYHPGRSGII- 656 + S S +R ++D +D K + E D L F P +HPGRS + Sbjct: 650 RQPESWLSTDR-DWLDFYDVKGIVELLGERLGLSDRLSF---VPLTDDERFHPGRSATLV 705 Query: 657 ---------KTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTKK 706 + + V+G GE HP + ++ P I E+ L+++ + + Sbjct: 706 LTTQRDGRGRAVEQQVVGVLGEAHPQVRARLEVTVPRIVLAEIDLETLFVHAGQAVYRP- 764 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S +DL+ + D+ + + ++I ++ ++ + +FD + G +GEGK+S+ Sbjct: 765 ---ISRFPASTQDLSIVADETVTEAQIRSVIQRSAGEYLESLVLFDRYSGPQVGEGKRSL 821 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T D+ + + +I+ ++ ++ A +RS Sbjct: 822 TYHLTFRAPDRTLLDETLAKIRKKIISSLERELGATIRS 860 >gi|67922517|ref|ZP_00516025.1| phenylalanyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] gi|67855601|gb|EAM50852.1| phenylalanyl-tRNA synthetase, beta subunit [Crocosphaera watsonii WH 8501] Length = 813 Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 236/836 (28%), Positives = 427/836 (51%), Gaps = 55/836 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK +++WL++ ++ ++ E + D LT GLEV+++++R + ++ K++ + +P+ D Sbjct: 1 MKISVNWLRELVNVTLTPEALADLLTIAGLEVDEIEDRRQWADGVVIGKIIDRQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G +VCGAPN + + A G+ +P+ ++ + K+RG++S GM+ Sbjct: 61 KLSVCQVDIGAETPSTIVCGAPNAKADIYVPVATLGTYLPKIDLKIKSAKLRGVKSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I D +G +LEL D I+D+S T NR+D + + G+A + Sbjct: 121 CSLAEVGLAKESAGIHIFEEDNLQLGADARPFLELDDVILDISPTANRADAMSMIGVARE 180 Query: 178 LVAAGLGKLK-----EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 + A G+L E +S P ++ PL + ++ D + C + ++GV+ +P+ Sbjct: 181 VAALTGGELNLPQPPETTLSDP---QTYPLTV--EVSDGNACPTYIGTIIEGVKIAPSPD 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS------DVLTVRR--ACSG 284 W++QRL+A G+R I+ +VDITN V L+ G P H FD ++ D LTVR A Sbjct: 236 WLQQRLEAAGVRPINNVVDITNLVLLEWGQPLHAFDRQKLETVAGNKDHLTVRARFAKDT 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + LD QE L+P N++I ++ ++AG++GG+ + T ++L+E AL++ + I Sbjct: 296 ETLKTLDGQERKLNPVNLLITANDTPVALAGVMGGEETEVAEETQNILLEAALFEQVTIR 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI--------ARN 396 RS ++ + +++ R+ERG++ + + ++LI L GGT + A + Sbjct: 356 RSSRSQSLRSEASARYERGINQSELELACRRAIALITELAGGTPVTQKMSDHRPDRSAES 415 Query: 397 ITYKPRKIVFMNSEVKRLSG-IDVPIEDSLRILERLGFS---VIGEYDKFEVSVPSWR-Q 451 I + +I + V++ I++ ED RIL LG + V GE V++PS+R + Sbjct: 416 IELRLDRIHHVLGPVEKDGQRINIAGEDVERILSDLGCTLTPVSGENTVLSVTIPSYRYR 475 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+E + DL+EE+ R+YG D+ E L + LS++ R V+ V + E+V Sbjct: 476 DLEREIDLIEEVARLYGYDRFCDE---LPDKTEAGGLSIEYQTQRKVREVFRGVGLTELV 532 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 +S + E++ +F + NP+ A+ S +RT+LL G++ A N + FE Sbjct: 533 QYSLVKPEKAEVF--------LSNPLFAEYSALRTNLLDGIIDAFAYNQSQGNGALNGFE 584 Query: 572 VSHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 + ++ E ++ AGI G +G W+ + + F+AK V + Sbjct: 585 IGRIFRKIDGEIAEWDNIAGIMGGDLLPQGR---WTRSG--KANPMSWFEAKGILERVFQ 639 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 R +S PGR+ + + LG FG+ HP + L + + FE+ Sbjct: 640 RLGVSVEYRQDS-EDERLQPGRTAALWLQGQ-KLGIFGQIHPQLRQEKDLMDEVYAFELD 697 Query: 691 LDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVT 748 + + + T SS V+RDLAF +P L + K +L+ V Sbjct: 698 FRCLSKVLNRDSLLTPHFQSYSSYPAVERDLAFFASLDVPVANLTKTMNKAGGKLLAGVE 757 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD +QG+++ EG++S+A + + T D+D+ + D+I + +VK+ LRS Sbjct: 758 LFDDYQGQNVPEGQRSLAFSLAYRSGDRTLTDEDVEPVHDKIRKALVKQFAVTLRS 813 >gi|58337783|ref|YP_194368.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus acidophilus NCFM] gi|227904433|ref|ZP_04022238.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus acidophilus ATCC 4796] gi|66773834|sp|Q5FIY7|SYFB_LACAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|58255100|gb|AAV43337.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus acidophilus NCFM] gi|227867808|gb|EEJ75229.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus acidophilus ATCC 4796] Length = 804 Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 236/811 (29%), Positives = 402/811 (49%), Gaps = 39/811 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KV+ E Sbjct: 1 MLVSYNWLQDFLNLDQEPHALAEKITRTGVEIADVKHPEEGLKKLVVGKVIDCEGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRGIES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGIESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ SD + I P DA V G + + L + D I+D +TPNR+D +G+ Sbjct: 120 GLQEIGFSDSVVPEEFADGIYVFPEDADVKPGQDVYEALGMDDYILDFDITPNRADTLGM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K K ++ ++ ++D+ L F + + GV+ +P Sbjct: 180 EGAAYEVGAIVDQKPKIGDVVLKEDGPDWTSSLEANVDEK-LAPKFYLRKLTGVKIQPSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA + L VR A GEK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKTFETGKLEVRLANKGEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + +E +L P +++I + +AG++GG ++ TTDV++E A++DP + +S Sbjct: 299 NEKEVELDPRDIIITDGEKPVMMAGVMGGLNSEITSETTDVILESAIFDPTLVRKSALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 T++ R+E+GV+ + L+ + T + I A + +P + S Sbjct: 359 ANRTEASSRYEKGVNWDATEKAINMAALLLRNDAQATIDEGIIKATDTKREPVVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + + G ++ E+ ++I +RLGF V + D V VP+ R D+ ADLVEE+ RIYG Sbjct: 419 HINDVLGSEISAEEMIKIFDRLGFVVDQDGDNIAVHVPNRRWDISIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D +KS +PL E S ++ R +K ++ + +ME +++S S E++V + Sbjct: 479 DNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYTKDP 535 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQK 585 +++ ++ P+++ S MR +L+ GL+ A N R A+FE VY+++ T + Sbjct: 536 KDIVKVQMPLNSSRSVMRQNLMTGLVDAASYNFARKQTQLALFEQGRVYDHEGGTFNEHE 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 ++AA SG +++ + + VD + K ++ + + + +E+ Sbjct: 596 HLAALY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFTAIGIDPEKVTYEAAP 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGLSNP-ICGFEVYLDS-IPISQKKR 701 HP R+ I + V G G H L L + G+E+ LD+ IP+ K Sbjct: 647 ILGMHPTRTAAIYIDKQYV-GMIGMIAHAVTLADKALRGAELYGYEINLDTIIPMLTKGM 705 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 T V ++RDL+ +VD+ I + N+IK N + + D+ V DV++G + Sbjct: 706 T----AVPAPKFPAIERDLSLLVDKEITNQEVENVIKSNAGKYLVDLKVIDVYEGSHIAI 761 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 GKKS A + KDT D + MD+I+ Sbjct: 762 GKKSFAYNLTFLNRKDTLTDKVVNNAMDKII 792 >gi|325957275|ref|YP_004292687.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] gi|325333840|gb|ADZ07748.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus acidophilus 30SC] Length = 804 Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 235/815 (28%), Positives = 402/815 (49%), Gaps = 47/815 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQEPHALAEKITRTGVEIADVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDKPLQIVCGAPNVDAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFNDSVVPEEFADGIYVFPEDADVKPGQDVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A ++ A K K ++ P ++S+ +++ D L F + + GV+ Sbjct: 180 EGAAYEVGAIVDQKPKVEDVVLKEDGPDWTDSLDVKV-----DEKLASKFYLRKLTGVKI 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P WM++RL G+R I+ +VD+TNYV L G P H +DA + L VR A GEK Sbjct: 235 QDSPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKAFENGKLEVRLANKGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ +E +L P ++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 295 LTLLNEKEVELDPKDIVITDGEKPVMMAGVMGGLNSEITSETTDVILESAIFDPTLVRKA 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIV 405 T++ R+E+G + + L+ + T + I A + +P + Sbjct: 355 ALRHANRTEASSRYEKGTNWDATEKAINMAALLLRNDASATVDEGIIKAADTKREPVAVK 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S + ++ G ++ ED L+I +RLGF V + D V VP+ R D+ ADLVEE+ R Sbjct: 415 TTISHINKVLGSEISPEDMLKIFDRLGFPVDRDGDDITVHVPNRRWDISIPADLVEEVGR 474 Query: 466 IYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D +KS +PL E S ++ R +K ++ + +ME +++S S E++ + Sbjct: 475 IYGYDNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKATRY 531 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ ++ P+++ S MR +L+ GL+ A N R A+FE VY++D Sbjct: 532 TKDPKDIVKVQMPLNSSRSVMRQNLMTGLVDAASYNFARKQTQLALFEQGRVYDHD---- 587 Query: 584 QKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 GI + SG +++ + + VD + K ++ + + + + + Sbjct: 588 -----GGIYNEHEHLAALYSGNTFAENWQHLTQKVDFYFVKGQLTNLFDAVGIDPEKVVY 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGLSNP-ICGFEVYLDS-IPIS 697 + + HP R+ I + V G G H L L N + G+E+ LD IP+ Sbjct: 643 RAESIEGMHPTRTAGIYIDKQYV-GMIGMIAHAVTLSDKALRNAELYGYEINLDVIIPM- 700 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK V ++RDL+ +VD+ + + N+IK N + + D+ V DV++G Sbjct: 701 ---LTKGMTAVPAPKFPAIERDLSLLVDKEVTNQEVENVIKSNAGKYLVDLKVIDVYEGS 757 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L GKKS A + KDT D+ + MD+I+ Sbjct: 758 HLAAGKKSFAYNLTFLNRKDTLTDEVVNNAMDKII 792 >gi|116872593|ref|YP_849374.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741471|emb|CAK20595.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria welshimeri serovar 6b str. SLCC5334] Length = 802 Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 233/825 (28%), Positives = 420/825 (50%), Gaps = 45/825 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPD- 57 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 58 --LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 L+ I++ D +++ +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCIVQTD--ENEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVSE 117 Query: 116 GMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS EL + I LP G L L D I+D+++TPNR+D + Sbjct: 118 GMICSLSELGFESKVVPKAYADGIYVLPDHVETGVSAITLLGLDDAILDMAITPNRADAL 177 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRN 227 + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 178 SMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIEI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E+ Sbjct: 236 KESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQEE 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD ++ L + VI + +IAG++GG+ + +TT V +E A++ +I ++ Sbjct: 296 ITTLDGEKRTLQAGHTVITNGIEPIAIAGVMGGEFSEVTHSTTTVALEGAIFSSSSIGKA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIV 405 + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 356 SRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLIGGVVEVDNRKKAVNKIE 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + R+ G + + + I +RLGF + + DK V VP+ R D+ +AD++EE+ R Sbjct: 416 TSLTRINRILGTTITLSEIKTIFDRLGFVLEVKEDKLIVEVPTRRWDITIEADILEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 476 IYGYDEI---PVTLPATSTTGGLSESQKARRVMRAYLECAGLNQALTYSLTSKKDATRLA 532 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT- 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 533 LSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDNL 592 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P Q+++A I +G + ++ + VD F K ++ L + Sbjct: 593 PIEQEHLAGLI---------TGNWHTSDWQKTPKPVDFFVLKGIVEGLVNKLGIKAELHW 643 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 HPGR+ I+ + + GY G HP + + L FE+ ++++ + Sbjct: 644 NQTEKEELHPGRTASIQLEGKEI-GYLGALHPAVEANYDLKETYV-FEINVEAL----LE 697 Query: 701 RTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 TK K V H +P + RDLA +VD+ I T+ +IK + +L+ D+ +FD+F+G+SL Sbjct: 698 ATKEKVVYHPIPRYPEMTRDLALLVDKDINHATISEVIKEHGGKLLVDIELFDIFEGESL 757 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GE KKS+A + + T ++D++ +++VE + K NA++R Sbjct: 758 GENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQTKLNAIIR 802 >gi|212550937|ref|YP_002309254.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549175|dbj|BAG83843.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 820 Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 245/843 (29%), Positives = 415/843 (49%), Gaps = 65/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 M + +WLK++L D+S ++ D LTSIGLE + E L I +VL+ E +P Sbjct: 1 MNISFNWLKEYLSFDLSPNQLADILTSIGLETNNIKEVEIIKGGLKGLIIGQVLTCENHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D I +D G + Q+VCGA NV +G + AP G+ + I ++K IRGIE Sbjct: 61 NSDHLYITTVDLGMDRPQQIVCGASNVAIGQKVIVAPVGTTLYSGGKIFTIKKSKIRGIE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + + I+ LP +G S+Y +L +D ++++++TPNR D Sbjct: 121 SNGMICAEDEIGIGEAHNGIVVLPETIKIGIPASEYYQLKNDYVLEINITPNRIDAASHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL AA L +++ + +S +E I ++D C + +K V+ Sbjct: 181 GVARDL-AAYLSFHHSPSVAHRFNVDSFKIEDKSPIITVKVEDILACPRYTGVTIKNVQV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +PNW+++RLKA+G+RSI+ +VDITNY+ + G P H FD I + + V+ G Sbjct: 240 KESPNWLKRRLKAIGVRSINNVVDITNYILHETGQPIHAFDLKAIKGNKIFVKTLPKGTT 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E LS ++++I ++ I G++GG +G +T ++ +E A ++P I R+ Sbjct: 300 FVTLDGIERRLSSEDLMICNEEIGMCIGGVLGGLDSGVTMSTKNIFLESASFNPTYIRRT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + G+ TD+ +RFERG D + LK LI + GG I + P K+ Sbjct: 360 ARFHGLNTDASFRFERGTDSNNTLYALKRAALLIKDIAGG----IIVGEIQDIYPNKVTN 415 Query: 407 MNSEV-----KRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 E+ L G ++ +D I + L ++ + + + +S+PS+R DV D++ Sbjct: 416 KIVELDIRKANSLIGKNISEKDIETIFDGLEIVILNKKNYVWSLSIPSYRVDVTRDVDVI 475 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWS 514 EEILRIYG + ++ + E K LS Q S R + LA E++N S Sbjct: 476 EEILRIYGYNNVEMKE------EIKSTLSFQTSTDRKYELQNIISEQLAGSGFNEILNNS 529 Query: 515 FISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 S +S+ F ++ + + NP+S+D+ MR +LL G L++ N + +D +E Sbjct: 530 LTSSTYYESLTFFSKKKCIPLYNPLSSDLDIMRQTLLFGGLESIEYNCNHKNSDLKFYEF 589 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 +VY + G + S+ E LW + +V + S+ E Sbjct: 590 GNVYFHFPVNGNDCLT------STKEEFHLALWIIGNSIVGNWV----CTTEKSSIYELK 639 Query: 633 VSLDSLRFESGAPS-----------WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +++ F G PS + G IKT LG G +I F ++ Sbjct: 640 SYTENILFRLGIPSRKIVYILCDNDIFSSGL--FIKTLLGKQLGILGILQKSICKKFSIN 697 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + E+ D + I + + + K+ + VKRDL+ ++D ++ + I +D Sbjct: 698 TEVYFAELNWD-LLIGEIEDIRIKQ-TDIPKFPFVKRDLSLLLDTNVLFAEIEKIAYQID 755 Query: 742 -RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 +++ ++ +FDV++G +L EGKKS A+ ++Q K T D I LM+ I + + +K NA Sbjct: 756 KKILKEIRLFDVYEGGNLPEGKKSYAVSFILQDQKKTLDDKQIENLMNCIQKKLEEKLNA 815 Query: 801 VLR 803 LR Sbjct: 816 QLR 818 >gi|269792341|ref|YP_003317245.1| phenylalanyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099976|gb|ACZ18963.1| phenylalanyl-tRNA synthetase, beta subunit [Thermanaerovibrio acidaminovorans DSM 6589] Length = 789 Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 252/794 (31%), Positives = 399/794 (50%), Gaps = 35/794 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK L WLK+ L +VSL+++ D LT G EVE+V + S +V KVLSVE +P + Sbjct: 1 MKVHLGWLKELLSLEVSLDRLMDRLTMTGTEVEEVISPAGASAGILVAKVLSVEPHPTRE 60 Query: 60 C-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R+ G++Q QVV GA NV G L +APPG+ I + + R G+ES GM+ Sbjct: 61 SLRIARVFDGENQ-AQVVTGASNVEEGHLYPYAPPGARIWDGTQL-GSRAFDGVESQGML 118 Query: 119 CSEKELMLS--DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL L D S +++LP D PVG + L P++D+S+TPNR D + G+A Sbjct: 119 LSCEELGLEGLDSSGGLLKLPEDVPVGADFISWAGLHLPVLDLSVTPNRGDLCSMLGVAR 178 Query: 177 DLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A G+L I I P E +DD C + + +GVR +P R Sbjct: 179 EVKALLGGELLPIEIPSPTDVLEDWSDRFSLRVDDPG-CWKYLLGYAEGVRICESPFHSR 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 RL G+R ++ +VD TN L G+P H FDA R+ + + VR A GE I LD ++ Sbjct: 238 LRLVLAGMRPVNNVVDATNLAMLLFGHPLHAFDADRLNAPSIEVRPAREGEVIRTLDGRD 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L P++++I S G +IAG++GG+ + TT +L+E A++DP ++ + + LGI + Sbjct: 298 RALQPEDLLICSGGEPVAIAGVMGGEDSEVRPETTRILLESAVFDPARVSLTSRRLGIPS 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 + +R+ R VD ++ ++L+ S + R R + S ++R+ Sbjct: 358 QAAFRYSRAVDWAESRRAAQYALALMASDGVRVGAGFISHREDFSIDRVVKLRTSSLRRV 417 Query: 415 SGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +D +E++ +LERLGF E + VPSWR DVE + DLVEE+ R+ G + +K Sbjct: 418 LLMD-SLEEATEVLERLGFQACSNEAGEAAFKVPSWRSDVEAEEDLVEEVGRVRGYEVVK 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-E 532 P + + + R + ++RV SR +EV+ +SF S E+ G + Sbjct: 477 --PRIPGALRGRGIIPQDLERWQEIRRVAMSRGYVEVMTYSFTSPEELHPLGMDPSQCPA 534 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIA-DFAIFEVSHVYENDTPEGQKYMAAGI 591 I+NPIS D MR +LPGL++ N++ +FE V+ E Q +MA + Sbjct: 535 IVNPISKDQVIMRPLILPGLIRGLRSNLNFGWKRPVRLFEWGTVFPAKDREAQ-HMAGLV 593 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G G ++EE D F K D +++ +R+E G + H G Sbjct: 594 YVGKDRRSVHG----PRAEE-----DFFTLKGDVEALLSSCGF--QVRWERGEEPFGHRG 642 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 ++ + V G+ P+I G+ GFEV L ++ + R V Sbjct: 643 QTASVMVDGRKV-GFLCRLKPSIESQLGVEEGAYGFEVDLSALEGWRLPRFGGS--VRFP 699 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S V RD+A +V+ H+ + + I+++ DR L + V +FDV+ GK + EG KS+A V Sbjct: 700 S---VSRDVAIMVEAHVQSDQVRRDIESLMDRSLAEGVELFDVYAGKGIPEGLKSLAFSV 756 Query: 770 LIQPLKDTFRDDDI 783 + + T RD+++ Sbjct: 757 VYRNPDRTLRDEEV 770 >gi|259047155|ref|ZP_05737556.1| phenylalanyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] gi|259036205|gb|EEW37460.1| phenylalanyl-tRNA synthetase, beta subunit [Granulicatella adiacens ATCC 49175] Length = 806 Score = 310 bits (793), Expect = 8e-82, Method: Compositional matrix adjust. Identities = 228/830 (27%), Positives = 414/830 (49%), Gaps = 51/830 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 MK + WL +++D + ++ +++ + ++ G+EV+ V E L + V +PD Sbjct: 1 MKLSYEWLNEYIDLSQITPQELGEKMSRTGIEVDSVTVPGEGLKGLVVGLATQVVDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ ++ G + +Q+VCGAPN+ G + A G+ I + I K+RG+ES GM Sbjct: 61 DHLHVVTVEVGDDEPLQIVCGAPNIAAGQKIIVATHGARIAGGHKI-KRGKLRGVESQGM 119 Query: 118 MCSEKEL----------------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 +CS +E+ + +DDS VG L L I+++ + Sbjct: 120 ICSLQEIGVPSNLVPKEYEDGIYVFTDDSIE---------VGSDAVHVLALDSAIVELDI 170 Query: 162 TPNRSDCIGVRGIALDLVA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 T NRSD + +RG ++ A L E + +S IP + +++ + + Sbjct: 171 TANRSDALSMRGSVHEIGAIYNLKNNLEPDAFEKGTSSEIPGVVTVSVENEADAPAYHAF 230 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVR 279 ++GV+ +P WM+ RL A G+R I+ LVD+TNY+ ++ G P H FD ++ + + VR Sbjct: 231 LIEGVKVAPSPQWMQNRLIAAGVRPINNLVDVTNYILMEYGQPLHAFDYDKLPEKAIHVR 290 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA GE ++ LD +E L + +VI S G+ ++AG++GG + TT VL+E AL+D Sbjct: 291 RATEGETLVTLDGEERTLE-NEIVITSGGQPVALAGVMGGLDTEISEETTTVLLEAALFD 349 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 P + + + + ++S RFE+G++ ++ K +LI L GGT + A + +Y Sbjct: 350 PKAVRLASQKHNLRSESSARFEKGINKATIVQAGKRAAALIAKLGGGTVKE-AFASSQSY 408 Query: 400 KPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 ++ ++ ++RL+ G + +++ ++ +L + E +F+V++P+WR D+ + Sbjct: 409 D-LELPVVSITLERLNHVLGTSLTLDEVKQVFAQLEYPTTVEGTRFDVTIPAWRFDISIE 467 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+ RIYG D+I + LP T+ L+ +Q RY ++ + + + ++ Sbjct: 468 ADLVEEVGRIYGYDKIPA-TLPTTE-STVGGLTDKQRFIRYTRQFMQGAGLSQAYTYALT 525 Query: 517 SKEQSVLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + E+S F + + P+S D S +R SLLP LL+A NV R+ + +FE V Sbjct: 526 TPEKSKWFTKKDATSVRLSWPMSEDRSELRQSLLPSLLEAVQYNVARSQNNVKLFEAGRV 585 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 ++ + ++ + G + + W+ K+E+ VD + K + L Sbjct: 586 FKLGAAGSEDFIENEVIAGILTGDVTSANWNHKAEK----VDFYVVKGILEAYFAQLDCL 641 Query: 636 DSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 D +RFE HPG+S I E V+G G+ HP + L + FE+ ++ + Sbjct: 642 DRVRFEPLTDIEELHPGQSARILLDGE-VIGLIGKVHPTVQKALDLQDTFV-FELDVEPL 699 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF 753 + + + V S+ RD+A + + LV++I+ N + VT+FDV+ Sbjct: 700 LAANLQEAVIQSVAKYPSM---TRDIAILAPTSLTHAELVDVIRENAGEFLSKVTLFDVY 756 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G+ + EG +S+A +L T +D I+ M R+ E +V N +R Sbjct: 757 KGEHVPEGFQSLAYSLLFVNRNATLEEDVIKSAMTRVEEALVSLDNVSIR 806 >gi|320528137|ref|ZP_08029302.1| phenylalanyl-tRNA synthetase, beta subunit [Solobacterium moorei F0204] gi|320131485|gb|EFW24050.1| phenylalanyl-tRNA synthetase, beta subunit [Solobacterium moorei F0204] Length = 805 Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 234/827 (28%), Positives = 406/827 (49%), Gaps = 52/827 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-- 57 M+ + WL++++D +D++ +++ D LT+ GLEVE ++ + I +V+ E PD Sbjct: 8 MRLSYKWLQEYVDLSDITPQQLADRLTTAGLEVEGIEPMAQGTGLVIAEVIECEDIPDTH 67 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 L I+R G++ Q+VCGA N R+GL + A PG+ +P + + + + GIES GM Sbjct: 68 LHRTIVRYGVGENDTTQIVCGAANCRLGLKVIAALPGAVLP--GITIQAKPLHGIESNGM 125 Query: 118 MCSEKELMLSDDSAS------IMELPIDAPVG-GRLSDYLELSDPIIDVSLTPNRSDCIG 170 +CS +EL + + I ELP DAPVG + Y+ D I+DVSLTPNR+DC Sbjct: 126 LCSLRELGIDHKYLTEKQINGIEELPQDAPVGETNVLGYIGYDDTILDVSLTPNRADCSS 185 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNV 229 + +A + AG +E+ +I F + ++ C F V V+ Sbjct: 186 MWNMAKE---AGAILHREVKWPDYAGKSNIGTPSTFKVASNTEKCDFFMGKVVNHVKVGP 242 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P WM + L A G+ SI+ +VDI+N+V L+ G P H ++ +++ K+ A Sbjct: 243 SPKWMVEYLHAAGINSINNVVDISNFVMLETGQPLHYYNLAKLPAREITVVDDRTLKMTA 302 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E+ + +++I ++G + IAGI+GG+ + D+ T + +E A ++ ++ RS Sbjct: 303 LDGVEFTIEKGDILITTNGEVTGIAGIMGGEESMIDETTEGIFIEAAHFNKTSVRRSSIR 362 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMN 408 L +IT++ RF +G++ + V L+ C + YKP + Sbjct: 363 LNLITEAAQRFTKGIEALAAQKAMDRSVQLLQEYACADGFEETVTYGTDGYKPVVVKETL 422 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S L G +++ L L F D+ +PS+R D+E +AD+ EEI+R+ G Sbjct: 423 SHCNALLGTAFTMDEVKETLTWLNFEPEVNGDEITCHIPSYRVDIEGRADIDEEIVRLIG 482 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ--SVLFGG 526 D +KS LP+ + S Q+ R R + L S + E+V ++ IS+E+ + L Sbjct: 483 FDSLKS-TLPVMSTTVGQLTSKQKLR-RMTRETLKSFGLNEIVTYTLISEEEMKTALSPL 540 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 G+ + + P+S + +R SLL +L + N D +FE+S VY D E + Sbjct: 541 GET-IPLAMPMSENRKYIRASLLNSVLTSVQYNEAHQNTDNLLFEISKVYAKDKEEERLA 599 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD---SLRFESG 643 + G + +D + D + K L+ + D ++R + Sbjct: 600 VVL-----------DGNVQNDPLHKLNEVGDFYALKGILLTWLNRCGFNDARITVRPNTT 648 Query: 644 APSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 +HP RS AE++L G FGE HP+ + + L + E+ LD + + Sbjct: 649 DVEHFHPYRS------AELLLDRKPLGLFGELHPSYVKKYDLKR-VTYAELSLDVVNETS 701 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + K V + + RD+A +VD+ + A ++ II + +L+ VFD+++G+ Sbjct: 702 ASKVK---FVPIDRYPSISRDIALVVDREVTAEEMLKIINSTGKKLVRKSEVFDIYEGEH 758 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + GKKSVA+++ Q T D+++R + D I+ + +K +A LRS Sbjct: 759 VEAGKKSVALRITYQATDHTLSDEEVRAVHDAILATLKEKLSADLRS 805 >gi|298208332|ref|YP_003716511.1| phenylalanyl-tRNA synthetase beta subunit [Croceibacter atlanticus HTCC2559] gi|83848253|gb|EAP86123.1| phenylalanyl-tRNA synthetase beta subunit [Croceibacter atlanticus HTCC2559] Length = 808 Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 236/838 (28%), Positives = 413/838 (49%), Gaps = 65/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + D + EK + LT +GLEVE ++ ++ L + +VL+ E +P Sbjct: 1 MKISYNWLKQFIQIDWAPEKTSELLTDLGLEVEGIEAFQSVKGGLEGVVVGEVLTCEPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + ++ G+ + +VCGAPNV G GS + + N ++ KIRG Sbjct: 61 NADRLKVTTVNVGEQTPLHIVCGAPNVAKGQKVPVVTVGSTLYDENGEPWVIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+C+E EL L IM L VG ++D ++ +D + ++ LTPNR+D + Sbjct: 121 VSEGMICAEDELGLGKSHDGIMVLDESLKVGTPVADIFDIENDVVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + + + ++ P S E+ I +++D+ L + + G++ Sbjct: 181 WGVARDLKAGLIQQEHAVTLNTPSVSKFKVENRSRRIAINVEDTDLAPRYCGTTITGIKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RL A+GL + +VD+TNYV + G P H FDA RI DV+ V+ +G K Sbjct: 241 AESPKWLKNRLLAIGLTPKNNVVDVTNYVMHELGQPLHAFDADRIEGDVINVKTLPAGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E +L ++++I + IAG+ GG ++G ++T + +E A ++P+++ ++ Sbjct: 301 FTTLDEVERELHENDLMICDANKPLCIAGVFGGVNSGVTEHTNSIFLESAYFNPVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-- 404 K G+ TD+ +RFERG+D + LK V LI L GG D+ + Y P+K Sbjct: 361 AKRHGLNTDASFRFERGIDPESTEYALKRAVLLIQELAGG---DVTMDSE-DYYPKKFED 416 Query: 405 --VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 VF+ ++ L G ++P E IL L V + +++PS+R DV+ ++D++ Sbjct: 417 FQVFLTFDKINTLIGEEIPTETIKSILASLEIKVNNVTETGLGLTIPSYRVDVQRQSDVI 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR-------TRYVKRVLASRAMMEVVNW 513 EEILR+YG + IK V K N S+ S V L S+ E+++ Sbjct: 477 EEILRVYGYNNIK--------VGKKLNASMSNSGRFDDYKLQNVVGNQLTSQGFYEMLSN 528 Query: 514 SFISKEQSVLF--GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S ++ + L + +++LNP+S D+S +R ++L L++ NV+R AD +FE Sbjct: 529 SLTAERYAELSEQSNPKHAVKMLNPLSQDLSVLRQNMLFSGLESIAFNVNRKRADLKLFE 588 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV----DLFDAKADALS 627 Y N Y + + I +G D++ E V D F K + Sbjct: 589 FGKTYHN-------YDSGRVEAKHLAIYLTG----DRNTEAWNIVQKPSDFFLLKG-TIE 636 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 I + + L + AP+ + G+ + + L FG + + + + Sbjct: 637 AILNRLGISKLNY---APTKHSDLSEGMSISLGKTTLVDFGIVNKTLCKKMNVDQDVLFA 693 Query: 688 EVYLDSIPI-SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 + D++ + + K+R K + V+RD A ++D ++ + +I + +R L+ Sbjct: 694 DFNWDNVLLMASKQRFKLNDI---PKYPKVRRDFALLLDDNVNFSQIDDIAQKTERKLLK 750 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++FDV++GK+L GKKS A+ ++Q T D + +M ++ + A LR Sbjct: 751 DVSLFDVYEGKNLPNGKKSYAVSFILQDENKTLTDKQVDKIMGKLQHQFENQLGAELR 808 >gi|289434471|ref|YP_003464343.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170715|emb|CBH27255.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 802 Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 229/826 (27%), Positives = 419/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ + +S E++ + +T G+E+E V+ A L + +VL+ ER+PD Sbjct: 1 MLVSYNWVKEFFEEFPLSAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLTCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEKEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP VG L L D I+D+++TPNR+D Sbjct: 117 EGMICSLSELGFESKVVPKAYADGIYVLPEHVEVGVSAISLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + + ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTQPDVSEKGTADTFLTVEVENPTETPYYAIKMVENIT 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRKLQAGHTVITNGKEPIAIAGVMGGESSEVTENTTVVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNRAKAINKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G ++ + + I +RLGF + DK + VPS R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTEITLAEIETIFDRLGFVLEVNDDKLIIEVPSRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LSL Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSLNQKARRVMRNYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSNEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC-RFVDLFDAKADALSVIEPFVSLDSLR 639 ++ AG+ G+ W + ++ + VD F K +++ L Sbjct: 592 LPIEQEHLAGLITGN---------WHEADWQKTPKPVDFFVLKGIVEGLVKKLGIKADLV 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I + + GY G HP + L FE+ ++ + + K Sbjct: 643 WKQTEKEELHPGRTASIYIEGKEI-GYLGGLHPAVEASADLKETYV-FEINVEEVLAASK 700 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 ++ V H +P + RDLA +VD++ T++ +IK + L+ D+ +FD+F+G+S Sbjct: 701 EKV----VYHPIPRYPEMTRDLALLVDKNTDHATILEVIKSHGGNLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEVLQEKLNAIIR 802 >gi|330995355|ref|ZP_08319265.1| phenylalanine--tRNA ligase, beta subunit [Paraprevotella xylaniphila YIT 11841] gi|329575850|gb|EGG57374.1| phenylalanine--tRNA ligase, beta subunit [Paraprevotella xylaniphila YIT 11841] Length = 835 Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 239/854 (27%), Positives = 423/854 (49%), Gaps = 70/854 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK+++D D++ +++ D LTS GLEV V+ + L + +VL+ +P Sbjct: 1 MNISYNWLKEYVDFDLTAQEVADALTSEGLEVGCVEEVQPVKGGLQGLVVGEVLTCVPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G + + + ++K +RG+E Sbjct: 61 NSDHMHVCTVNLGEGEPVQIVCGAPNVAAGQKVVVATLGCKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP A G ++Y L SD +I+V +TPNR+D Sbjct: 121 SNGMICAEDEIGIGTDHNGIIVLPGTAVPGIPAAEYYNLKSDYLIEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + + + P +S L+I ++ ++ C +A ++ Sbjct: 181 GVARDLYAWLVQNGHKTALHRPSCDSFKVDSHELDIDIEVQNAEACPRYAAVTLRNCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VD+TNY+ G P H FDA I + V+ G Sbjct: 241 ESPEWLQDKLRIIGLRPINNIVDVTNYIMFAYGQPLHCFDADMIKGGKVVVKTMPDGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ LS ++ I + IAG+ GGK +G + T DVL+E A ++P I +S Sbjct: 301 VTLDGEEHKLSDRDLAICNMEEPMCIAGVFGGKGSGTYETTRDVLLESAYFNPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK---PRKI 404 + G+ TD+ +RFERG+D G+I LK L L GG +I + Y P I Sbjct: 361 RRHGLSTDASFRFERGIDPNGVIYALKQAAMLCKELAGG---EIAMEIKDVYPNPLPDFI 417 Query: 405 VFMNSEVKR-LSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 V +N E L G ++ + I+ L ++ E + ++ VP++R DV+ D+VE+ Sbjct: 418 VDLNYEYAYGLMGKNIGADTVKSIVTSLEMKILEETAEGLKLQVPAYRVDVQRPCDVVED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILR+YG + ++ +P + V+ N+ + ++ ++ ++A + E++N S Sbjct: 478 ILRVYGYNNVE---IP-SSVKSTLNVKGDEDKSHKLQNLVAEQLVGCGFNEILNNSL--- 530 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +++ + G ++++NP+S+D++ MR +LL G L+ N +R AD FE Sbjct: 531 QRAAYYDGLESYPASHLVKLMNPLSSDLNAMRQTLLFGGLECVAHNANRKNADLKFFEFG 590 Query: 574 HVY---ENDT-------------PEGQKYMAAGIRKGSS-GIEGSGRL----WSDKSEER 612 + Y E D PE K++ + G+ +G+ W+ E+ Sbjct: 591 NCYYFREEDKCPDIIPGVSSSRDPEVIKHVLDAYSEDYHLGLWVTGKRVSGSWAHPDEDS 650 Query: 613 CRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI-IKTSAEIVLGYFGEF 670 ++ KA L+++ V+ +L F APS GI I+ VL G Sbjct: 651 ----SFYELKAYVLNILTRLGVNFGALVF---APSRNDIYSKGIEIQNRGGKVLAMLGIV 703 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 I + + + L+ + + R +S V RDLA ++D+ + Sbjct: 704 SRKIRKMMDVDAEV--YYADLNWKLLMKAIRNNKISYTEISKFPAVSRDLALLLDKGVEF 761 Query: 731 GTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + + + + +L+ +VT+FDV++GK+L GKKS A+ ++Q T D I +M++ Sbjct: 762 AEVEKVAYSTEKKLLKEVTLFDVYEGKNLEAGKKSYAVNFVLQDETKTLNDKQIDAIMNK 821 Query: 790 IVENVVKKTNAVLR 803 ++ N+ K A LR Sbjct: 822 LIANLQAKLGAKLR 835 >gi|78186589|ref|YP_374632.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobium luteolum DSM 273] gi|91208125|sp|Q3B4Z2|SYFB_PELLD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78166491|gb|ABB23589.1| phenylalanyl-tRNA synthetase beta subunit [Chlorobium luteolum DSM 273] Length = 804 Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 248/832 (29%), Positives = 400/832 (48%), Gaps = 59/832 (7%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +++WLKD L + + + + LT +GLEVE V++ +V +V SV +PD Sbjct: 1 MKISVNWLKDFLPSFSPDITSLVEKLTFLGLEVEDVESTPLPDLRVVVGRVQSVALHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIES 114 D I +DTG + +Q+VCGAPNV G+L A GS + + ++ KIRG S Sbjct: 61 DRLRICMVDTGLEEPLQIVCGAPNVAEGMLVPVATEGSRLTMQDGTSFVIKPSKIRGQRS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+ EL LS D + +MEL VG + YL+ SD ++D+++TPNR D + GI Sbjct: 121 FGMICAADELGLSADHSGVMELDSSYAVGEPFARYLD-SDTVLDIAVTPNRPDVLSHLGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDSSLCKGFAMCCVKGVRNNV 229 A +L +A L E PLE D + DS C + ++GV Sbjct: 180 ARELGSAP---------DAILFPEEAPLEFSADSPLVQVMDSGACPLYVGVIIRGVTVGP 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W+ RL+++GLR + +VDITN++ G P H FD ++ + R+ Sbjct: 231 SPRWLSARLESIGLRPKNNIVDITNFILHALGQPLHAFDLQKLKGGRVIVRSDFSGSFTT 290 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L ++ + P VI ++AG++GG + + T D+L+E A + P + RS + Sbjct: 291 LGAEQCTVEPGMPVICDTQMPVALAGVMGGLDSAVGEGTVDILLEAACFAPSAVRRSARK 350 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 GI +DS YRFERG+D++ ++P + V+LIL GGT + + + + + F Sbjct: 351 AGISSDSSYRFERGIDIRNVLPAARAAVALILETAGGTVGEATLQGDPSPALLVLPFRPR 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 L G + + +L R+GF + + +V VPS R DV ++ DL+EE+ R++G Sbjct: 411 RANELLGTAIETDAMQAMLARIGFRTLALDEGVMQVEVPSCRIDVLQEIDLIEEVARLHG 470 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTR------YVKRVLASRAMMEVVNWSFISKEQSV 522 D I++ + + SRTR +++ V EV+ I +E++ Sbjct: 471 YDNIEA--------SGRLAATYPASRTRPGYFPDFLRGVAVGLDFREVLTNPLIRREEAA 522 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 FG G + +LNPIS + +R L+PG+LK N+ D +FEV+H + P Sbjct: 523 PFGDGL--VSVLNPISEGLEVLRPGLVPGMLKVIAHNIRHGNRDMRLFEVAHGFSVADPS 580 Query: 583 G---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 G Q + A K + +G + + VD +DA A ++ LD Sbjct: 581 GAAEQGPLGAYCEKEWLVLALTGNRYPRSWNQPPDRVDFYDAVGAAEMLLGKLNLLD--- 637 Query: 640 FESGAPSWYHPGRSGI------IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 A + Y+ I K G +L FG+ + F V LD Sbjct: 638 --KSAVNIYNENTVSIDLELTEGKKKRSQRAGRAMRLDSALLSQFGIEQDV--FTVELD- 692 Query: 694 IPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFD 751 +S + + VV+ S V+RDL+FI+ +P +LV ++++ D LI DV+VFD Sbjct: 693 --VSVLEMLYSPDVVYDPPSKFPAVQRDLSFILPGTVPVQSLVGLVRSSDPLIRDVSVFD 750 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VF+ S G G++SV + + I T ++ I ++ + N K AV+R Sbjct: 751 VFERGSGGGGERSVGLSISIADHSGTLQEGRISEILRTVGVNAESKLGAVIR 802 >gi|332826766|gb|EGJ99583.1| phenylalanyl-tRNA synthetase subunit beta [Dysgonomonas gadei ATCC BAA-286] Length = 821 Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 253/850 (29%), Positives = 427/850 (50%), Gaps = 76/850 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVERNP 56 M + +WLKD+LD D++ E+ LTS+GLE VE+V+ + L I +VL+ +P Sbjct: 1 MNISYNWLKDYLDFDLTPEETSAALTSLGLETGGVEEVETVKGGLEGLVIGEVLTCIDHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 D D + ++ G+ + +Q+VCGAPNV VG V A G+ + E + + KIRG E Sbjct: 61 DSDHLHVTTVNVGQEEPLQIVCGAPNVAVGQKVVVALVGTKLYQGEESFTIKKSKIRGTE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + A I+ LP+DA VG +Y + SD I++V +TPNR D Sbjct: 121 SFGMICAEDEIGIGTSHAGIIVLPVDAKVGMPAKEYYNIKSDYILEVDITPNRIDGASHY 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD---------LDDSSLCKGFAMCCVK 223 G+A DL A L++ + L+ S+ + K D ++++ C +A ++ Sbjct: 181 GVARDLEAY----LRQNKLKGALTLPSVD-DFKIDEPTGAITVRVENTEACPRYAGLTIR 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 GV+ +P W++++L +G R I+ +VDITNYV G+P H FD + I+ + VR Sbjct: 236 GVKVTESPEWLKEKLTLIGQRPINNVVDITNYVLHSMGHPLHAFDVAHITGGEVIVRTLP 295 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G K + LD E LS +++I +D I G+ GG +G ++TT+V +E A ++P Sbjct: 296 EGTKFVTLDEVERTLSDRDLMICNDKEGMCIGGVFGGMKSGVTESTTEVFLESAYFNPTW 355 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKP 401 I ++ + G+ TD+ + FERG D I VLK+ LI + GG + DI +++ P Sbjct: 356 IRKTARRHGLNTDASFHFERGCDPNDTIYVLKYAAMLIKEIAGGKITGDI---QDVYPDP 412 Query: 402 --RKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKA 457 + IV ++ E V L G + + IL L + E D + +P++R DV Sbjct: 413 VAKPIVKLSYEKVNSLIGKAIDKQTVRSILNNLEMVITEESDDMLTIEIPTYRVDVLRDV 472 Query: 458 DLVEEILRIYGVDQIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 D++E+ILR+YG + I+ S P + D +NL +Q L Sbjct: 473 DVIEDILRVYGYNNIEIGDNLKSNLSYETPTDKGYDLQNLVSEQ---------LTGSGFN 523 Query: 509 EVVNWSFISKE----QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E++N S ++KE SV++ + + +LNP+S D++ MR +L+ G L++ N +R Sbjct: 524 EIMNNS-LTKEAYYTDSVVY-PASKCVYLLNPLSTDLNVMRQTLIYGGLESIAYNRNRQN 581 Query: 565 ADFAIFEVSHVYENDT---PEGQ------KYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 D +E + Y D EG+ + GI S I+ S W+ +E+ Sbjct: 582 PDIRFYEFGNCYFYDADKKTEGETLKEYSEEYHLGIWLSGSSIDNS---WTSANEKSS-- 636 Query: 616 VDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 +F KA +++ + + +E + + + K + LG G + + Sbjct: 637 --VFQLKAYVENILTRLGIPVSKYDYEQFSNEIFSTAIAIQAKGKGK-SLGVLGIVNKKL 693 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 L +S + E+ D++ +K T +S VKRDLA ++D+ + + Sbjct: 694 LKAQDISTEVYFAELNWDALMKEIRKNVITYS--EMSKFPAVKRDLALLLDEAVLFDQIE 751 Query: 735 NIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I +R L+ +V +FDV++GK+L EGKKS A++ ++Q + T D I +M +I ++ Sbjct: 752 KIAYKAERKLLKEVRLFDVYEGKNLPEGKKSYAVKFVLQDDEKTLNDKQIDAIMQKIQKS 811 Query: 794 VVKKTNAVLR 803 + + A LR Sbjct: 812 LESELGAQLR 821 >gi|294792001|ref|ZP_06757149.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella sp. 6_1_27] gi|294457231|gb|EFG25593.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella sp. 6_1_27] Length = 814 Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 235/819 (28%), Positives = 395/819 (48%), Gaps = 60/819 (7%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKV---DNREALSPFTIVKVLSVERN 55 MK +L W+ +++ D++ +++ D LT G+ VE V DN + K++ + ++ Sbjct: 1 MKASLQWMNEYVPVDMNRPAQELADELTQAGIPVEDVIAMDN--GIKKIYTGKIVEITKH 58 Query: 56 PDLD----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 PD D C + + G+ Q+V A NV VG + A S + + I K+R Sbjct: 59 PDADKLQVCQVECLTEEGEPVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLR 117 Query: 111 GIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G+ S GM CS E L+L +++ I P P+G + D L L+D + + LT N Sbjct: 118 GVVSEGMFCSVAEFGISSDLVLPEEAQGIYIFPEGTPIGLDVKDVLGLNDTVYEFELTAN 177 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R+DC + G++ + K I + ESI + ++ LC F V Sbjct: 178 RADCFSMVGLSREFGVMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTD 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V+ +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA + Sbjct: 238 VKVEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRAKN 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD E +L+ ++IA R +AGI+GG + + TT V+ E A ++ +I Sbjct: 298 GEVLVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAEFNGPSI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 R+ K LG+ +++ RFERGV+ + + L+ +C + + ++ P Sbjct: 358 RRTAKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVGVGVI-DVYKNPVE 416 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + F +++ G ++ ++ +RIL L F V E DK VP+WR DV D+ Sbjct: 417 QHTVTFTAAQINDYLGTNIEKDEMVRILTALEFVVTEEGDKLSALVPTWRGDVTVMPDIA 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EEI RIY D I P V ++ +++ + V LA M +++ +SF+ K+ Sbjct: 477 EEIARIYNYDNIT--PTIPVAVLSSGGMTPKKALIKEVTHALAKLGMTQIITFSFMHKDG 534 Query: 520 --QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++V Sbjct: 535 LSNMMLPEGDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANV 594 Query: 576 YE-NDTP----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSV 628 YE D P ++ MA GI G + G W+ R D +D K DAL Sbjct: 595 YEPKDLPLTEVPHERPMACGILMGKANQAG----WNQAE----RTTDFYDVKGIVDALLA 646 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + S G ++HPG S +++ Y GE HP + F L + FE Sbjct: 647 ---ELGVTSYEVNRGTEPYFHPGVSAQYVVDGKMIAQY-GELHPQVSKNFDLPGKVYMFE 702 Query: 689 VYLD---SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLI 744 + L+ S+ I + T S RDLA + + +G +++IIK + + Sbjct: 703 IDLEAVLSLTIPPFRYTS------FSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEYL 756 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 757 ESASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 795 >gi|296129477|ref|YP_003636727.1| phenylalanyl-tRNA synthetase, beta subunit [Cellulomonas flavigena DSM 20109] gi|296021292|gb|ADG74528.1| phenylalanyl-tRNA synthetase, beta subunit [Cellulomonas flavigena DSM 20109] Length = 859 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 246/870 (28%), Positives = 403/870 (46%), Gaps = 80/870 (9%) Query: 2 KFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 + L+WL +H++ L E++ L +GLE E + + P + +VL + P + Sbjct: 3 RIPLTWLGEHVELPAGLTAEQLAADLVRVGLEEEAIHSSGVSGPLVVGQVLELMPEPQKN 62 Query: 60 CAIL---RIDTGKHQEIQ----------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + ++D G H + +VCGA N VG V A PG+ +P ++ Sbjct: 63 GKTINWCQVDVGAHNALDEAGNPTVPRGIVCGAHNFGVGDRVVVALPGAVLP-GPFAISA 121 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELP-------IDAPVGGRLSDYLELSDPIIDV 159 R+ G S GM+CS++EL L DD A I+ L AP L+ L L D ++++ Sbjct: 122 RRTYGHVSDGMICSQRELGLGDDHAGIIVLSRLGHGEDATAPGTDALA-LLGLGDEVLEI 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 ++TP+R C +RG+A + + + + P + P ++++ + G Sbjct: 181 NVTPDRGYCFSMRGVAREYAHSTGAAFTDPGVETPETLRERPAGFAVEIEEDAGIHGVPG 240 Query: 220 C------CVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C V+GVR + +P WM++RL G+R IS VD+TNYV LD G P H +D + Sbjct: 241 CDRFVAQVVRGVRASGPSPAWMQRRLTQAGMRPISLAVDVTNYVMLDLGQPMHAYDLGTV 300 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GRIQSIAGIIGGKHAGCDDN 327 + + VRRA GEK LD+ E L P +++I R+ IAG++GG + D Sbjct: 301 TAPVVVRRARPGEKATTLDDVERALDPQDLLITDSTGGRAARVLGIAGVMGGADSEVSDA 360 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TTD+L+E A +DP++IARS + + +++ RFERGVD + + +L++ GGT Sbjct: 361 TTDLLLEAAHFDPVSIARSSRRHRLTSEASKRFERGVDPRLARVAVARAAALLVEHGGGT 420 Query: 388 ASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 A D + T +P +V ++ S+ RL G+ ++ L +G V ++V V Sbjct: 421 ADDALTDVDRT-RPAPVVALDPSQAARLVGVPYTDDEVRTTLTDIGCEVDCATTPWQVRV 479 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 PSWR D+ DLVEE+ R+ G D I S P P L+ Q R V LA+ Sbjct: 480 PSWRPDLVVGVDLVEEVARLRGYDAIPSLVPPAP-----SGTGLTRGQRLRRAVADTLAA 534 Query: 505 RAMMEVVNWSFISKEQSVLFG--GG---QRELEILNPISADMSNMRTSLLPGLLKATGRN 559 ++EV+++ F+ +Q + G G +R + ++NP++ MRT LL LL RN Sbjct: 535 GGLVEVLSYPFVGADQLEVLGLPAGDERRRAVRLVNPLADGQPLMRTDLLVTLLDTARRN 594 Query: 560 VDRAIADFAIFEVSHVYEND--TPEGQKYMAAGIRKGSSGIEG------------SGRLW 605 V R D ++E+ V D P + + G+R + +G L Sbjct: 595 VARGNVDLGLYELGLVTLPDVGAPPAPR-LPGGVRPSDGQLAALEKAVPAQPLHVAGVLA 653 Query: 606 SDKSEER----CRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSA 660 R R DL D A V + V L + AP +HPGR + + Sbjct: 654 GLAEPARRGSVGRRADLEDVLAHVQRVAQVVGVELSATADRERAP--FHPGRCARLTVPS 711 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 V+G+ GE HP ++ L FE LD + ++ +S+ K D+ Sbjct: 712 GAVVGHAGELHPKVVAALDLPARAVAFE--LDLTALLAATPSEPVPATPVSTFPVAKEDV 769 Query: 721 AFIVDQHIPAGTLVNIIKNVDR------LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 A +V +P ++ ++ +++D+ VFDV+ G +G G+KSVA + ++ Sbjct: 770 ALVVADDVPVADVLAAVRAGAAGSAAGDVLEDLHVFDVYAGDQVGPGRKSVAFALRLRAQ 829 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + + D +V + A LR+ Sbjct: 830 DRTLTAAETAAVRDAVVAEAHARVGATLRA 859 >gi|294793866|ref|ZP_06759003.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella sp. 3_1_44] gi|294455436|gb|EFG23808.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella sp. 3_1_44] Length = 814 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 234/819 (28%), Positives = 396/819 (48%), Gaps = 60/819 (7%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKV---DNREALSPFTIVKVLSVERN 55 MK +L W+ +++ D++ +++ D LT G+ VE V DN + K++ + ++ Sbjct: 1 MKASLQWMNEYVPVDMNRPAQELADELTQAGIPVEDVIAMDN--GIKKIYTGKIVEITKH 58 Query: 56 PDLD----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 PD D C + + G+ Q+V A NV VG + A S + + I K+R Sbjct: 59 PDADKLQVCQVECLTEEGEPVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLR 117 Query: 111 GIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G+ S GM CS E L+L +++ I P P+G + D L L+D + + LT N Sbjct: 118 GVVSEGMFCSVAEFGISSDLVLPEEAQGIYIFPEGTPIGLDVKDVLGLNDTVYEFELTAN 177 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R+DC + G++ + K I + ESI + ++ LC F V Sbjct: 178 RADCFSMVGLSREFGVMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTD 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V+ +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA + Sbjct: 238 VKVEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRAKN 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD E +L+ ++IA R +AGI+GG + + TT V+ E A+++ +I Sbjct: 298 GEVLVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAVFNGPSI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 R+ K LG+ +++ RFERGV+ + + L+ +C D+ + ++ P Sbjct: 358 RRTAKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVDVGVI-DVYKNPVE 416 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + F +++ G ++ ++ +RIL L F V + DK VP+WR DV D+ Sbjct: 417 QHTVTFTAAQINDYLGTNIEKDEMVRILTALEFVVTEDGDKLSALVPTWRGDVTVMPDIA 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EEI RIY D I P V ++ +++ + LA M +++ +SF+ K+ Sbjct: 477 EEIARIYNYDNIT--PTIPVAVLSSGGMTPKKALIKEDTHALAKLGMTQIITFSFMHKDG 534 Query: 520 --QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++V Sbjct: 535 LSNMMLPEGDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANV 594 Query: 576 YE-NDTP----EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALSV 628 YE D P ++ MA GI G + G W+ R D +D K DAL Sbjct: 595 YEPKDLPLTEVPHERPMACGILMGKANQAG----WNQAE----RTTDFYDVKGIVDALLA 646 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + S G ++HPG S +++ Y GE HP + F L + FE Sbjct: 647 ---ELGVTSYEVNRGTEPYFHPGVSAQYVVDGKMIAQY-GELHPQVSKNFDLPGKVYMFE 702 Query: 689 VYLD---SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLI 744 + L+ S+ I + T S RDLA + + +G +++IIK + + Sbjct: 703 IDLEAVLSLTIPPFRYTS------FSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEYL 756 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 757 ESASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 795 >gi|41407458|ref|NP_960294.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium avium subsp. paratuberculosis K-10] gi|66773923|sp|Q740J0|SYFB_MYCPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|41395810|gb|AAS03677.1| PheT [Mycobacterium avium subsp. paratuberculosis K-10] Length = 828 Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 244/820 (29%), Positives = 399/820 (48%), Gaps = 86/820 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + D DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRVPYSWLREVVAAGAPDWDVAPAELEQTLIRIGHEVEEVIELGPVDGPLTVGRVTDIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C +D G + ++VCGA N G L V A PG+ +P + RK Sbjct: 61 LTGFKKPIRFC---HVDVGDDVDREIVCGATNFVAGDLVVVALPGTTLP-GGFAIAARKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D I +++TP+R C Sbjct: 117 YGRNSDGMICSAAELGLGADHSGILVLPPGTAEPGADGAAVLGLDDVIFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV- 225 + +RG+A ++ A L + ++ P+ ++ PL ++ D + + FA+ V G+ Sbjct: 177 MSLRGLAREIACAYDLEFVDPADVKPLPVDGQAWPLTVQPD----TGVRRFALRPVTGID 232 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 V+P W+++RL G+R+ S VD+TNYV L+ G+P H D +RIS L VR A GE Sbjct: 233 PAAVSPWWLQRRLLLSGIRATSPAVDVTNYVMLELGHPMHAHDRNRISGGLGVRFARPGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+ E L P +V+I D +I G++G ++TDVL+E A+WDP ++R Sbjct: 293 TVVTLDDIERKLEPVDVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAVWDPAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYK 400 + + L + +++ R+ERGVD + L +L+ + GG S+ + Sbjct: 353 TQRRLHLPSEAARRYERGVDPAISVAALDRCAALLAGIAGGKVSEALTDWRGEPACDGWS 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P I RL+G+ P + + L ++G +V + V PSWR D+ + ADLV Sbjct: 413 PPAIQMPADLPDRLAGVIYPPGTAAKRLAQIGAAVTADGGTLTVVPPSWRPDLLQPADLV 472 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+LR+ G++ I S L R LS Q R R + R LA +E++ F+ Sbjct: 473 EEVLRLEGLEVIGSV---LPSAPAGRGLSAAQRRRRAIGRSLAQSGYVEILPTPFLPAGV 529 Query: 521 SVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 ++G + ++LNP+ AD ++ T+LLP LL+A RNV R + D +++ ++ V Sbjct: 530 FDVWGLPDDDPRRGTTQVLNPLEADRPHLATTLLPALLEALVRNVSRGLVDVSLYALAQV 589 Query: 576 YENDT--------------------------PEGQKYMAA---GIRKGSSGIEGSGRLWS 606 + P +++AA G+R+ G G GR Sbjct: 590 VQPTAETRAVQFIPVDRRPTDAEIAVLDASLPRQPQHVAAVLTGLRE-QRGPWGPGR--- 645 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 R D F+A + VI +D +R + +HPGR + + +GY Sbjct: 646 -----RAEAADAFEA----VRVIARAAGVD-VRLRAAQQLPWHPGRCAEVLVG-DTPVGY 694 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G+ HP +++ GL C E+ LD+IP+ T +S V +D++ +V Sbjct: 695 AGQLHPAVVERAGLPRGTCALELDLDAIPL-----VATLPAPRISPFPAVFQDVSLVVAA 749 Query: 727 HIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +PA + + + + L++D+ +FDVF G LGE +KS+ Sbjct: 750 DVPAQAVADAVCEGAGDLLEDLQLFDVFTGPQLGEHRKSL 789 >gi|167761165|ref|ZP_02433292.1| hypothetical protein CLOSCI_03570 [Clostridium scindens ATCC 35704] gi|167660831|gb|EDS04961.1| hypothetical protein CLOSCI_03570 [Clostridium scindens ATCC 35704] Length = 806 Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 246/844 (29%), Positives = 405/844 (47%), Gaps = 97/844 (11%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ + D +T G +VE + +A LS + ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPDLDVTAREYTDAMTLSGTKVEGYEELDADLSKIVVGQIDKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG----------LLGVWAPPGSCIPENNMIVNVR 107 D I+ +++ G + +Q+V GA NV G + PGS + + + Sbjct: 61 DKLIICQVNIGS-ESVQIVTGANNVHEGDKVPVVLDGGRVAGGHEPGSRVA-GGIKIKKG 118 Query: 108 KIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 K+RGIES GMMCS +EL D I D VG + L L+D + + + Sbjct: 119 KLRGIESCGMMCSIEELGSDRDMYPEAPEEGIYIFKDDVEVGSSAIEALGLNDVVFEYEV 178 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 T NR DC V GIA + A + ++ ++E + IK + DS LC + Sbjct: 179 TSNRVDCFSVIGIAREAAATFGKEFHPPVVTATGNNEDVNDYIKVSVKDSELCPRYCARV 238 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRR 280 VK ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I+D + VR Sbjct: 239 VKNIKIGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIADREIIVRT 298 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A GEK LD QE ++ D V++ SDG+ IAGI+GG+++ D+ +L E A +D Sbjct: 299 AAKGEKFTTLDGQEREMD-DTVLMISDGKKSIGIAGIMGGENSMITDDVKTMLFEAACFD 357 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNIT 398 NI +S K +G+ TD+ +FE+G+D + L+ L G + Sbjct: 358 GTNIRKSSKKVGLRTDASGKFEKGLDPNNAQAAIDRACQLVEELGAGEVVGGMVDVYGKK 417 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEK 456 +P +++F + L G D+ E+ + E++G + YD+ EV P++R D+ Sbjct: 418 KEPVRVLFDADAINNLLGTDISKEEMIGYFEKIGLA----YDEGSNEVIAPTFRHDLFRV 473 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSF 515 ADL EE+ R YG D I P L + E + R V R +A + + +SF Sbjct: 474 ADLAEEVARFYGYDNI---PTTLPRGEATTGKLSFKLRVEEVARDIAEFCGFSQGMTYSF 530 Query: 516 ISK---------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 S E S+L ++ +EI+NP+ D S MRT+ L G+L + N +R D Sbjct: 531 ESPKVFDKLMIPEDSLL----RQTVEIINPLGEDYSIMRTTSLNGMLMSLATNYNRRNKD 586 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLF 619 ++E+ +VY P+ ++ EER +F D F Sbjct: 587 VRLYELGNVY---IPKALP-------------------LTELPEERMQFTLGMYGDGDFF 624 Query: 620 DAKADALSVIEPFV------SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 K VIE F ++ ++G P + HPGR + +V GY GE HP+ Sbjct: 625 SMKG----VIEEFFDKVGMHGKETYDPQAGKP-YLHPGRQANVIYDGTVV-GYLGEVHPD 678 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 + D +G+ G + Y+ I + + K+ T +K ++ V RD++ ++ + I AG Sbjct: 679 VADTYGI-----GTKAYIAVIDMPEIVKRATFDRKYTGIAKFPAVNRDISMVMPKEILAG 733 Query: 732 TLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + +I K ++ +FD+++G + EG KSVA ++ + T D ++ M+RI Sbjct: 734 QVEEVIEKKGGAYLESYALFDLYEGAQIKEGYKSVAYSIVFRAKNKTLEDAEVTEAMERI 793 Query: 791 VENV 794 ++ + Sbjct: 794 LKEL 797 >gi|194337121|ref|YP_002018915.1| phenylalanyl-tRNA synthetase, beta subunit [Pelodictyon phaeoclathratiforme BU-1] gi|194309598|gb|ACF44298.1| phenylalanyl-tRNA synthetase, beta subunit [Pelodictyon phaeoclathratiforme BU-1] Length = 803 Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 236/838 (28%), Positives = 413/838 (49%), Gaps = 72/838 (8%) Query: 1 MKFTLSWLKDHLDTDVS-LEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK ++SWLK L + S + + LT +G EVE+V +V ++ V ++P+ Sbjct: 1 MKISVSWLKGFLPSFSSDTLSLVEKLTFLGFEVEEVQEPSLPDDLVVVGRIEEVVQHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIES 114 + I R+D G+ + +Q+VCGAPNV+ G++ A + + ++ + + KIRG S Sbjct: 61 ERLTICRVDVGREEPLQIVCGAPNVKAGMVVPVATLKAKLTASDGQTITIKPSKIRGERS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+ EL LSDD + +MEL +G ++ Y + D ++D+++TPNR D + GI Sbjct: 121 FGMICAADELGLSDDHSGVMELDSSCRIGEPVARYFD-GDVVLDIAVTPNRPDVLSHLGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A +L +EI+ + + D+ D+ C + ++G+ +P W+ Sbjct: 180 ARELAGG-----EEIHYPEQNAVPFVQTGTLVDVLDAVACPYYTGVVIRGITVAESPAWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R++L+++GLR + +VDITNY+ G P H FD +++ V R+ + +A++ Q Sbjct: 235 RKKLESIGLRPKNNIVDITNYILHGLGQPLHAFDLQKLAGERVVVRSDVRGEFVAINQQS 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + + P VI + ++AG++GG + D TTD+L+E A +DP I +S K I + Sbjct: 295 FQVEPGMPVICDSQKPVALAGVMGGLESAVSDATTDILLESAWFDPSMIRKSAKKAAISS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 D+ YR+ERG+D + + + V+LIL L GG + ++ + R++ V L Sbjct: 355 DASYRYERGIDPRNVRRSAECAVALILELAGGRIEEAQEWGSVPAELRRVALRADRVNAL 414 Query: 415 SGIDVPIEDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 G + + + +L+R+GF GE FE VPS R DV + DLVEEI R+YG D Sbjct: 415 LGSSIAAGEMVAMLQRIGFRTDETEGESITFE--VPSCRVDVSGEIDLVEEIARLYGYDN 472 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I+ T R + +++ ++ E++ + +E++ LF + + Sbjct: 473 IQPSAQMATIYPQSRKFP--EFFPDFLRSLMVGLHFREILTNPLVKREEAALF--SDKLV 528 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN------------D 579 +LNPIS + +R +L+PG LK N+ D +FEV+ +++ D Sbjct: 529 GVLNPISEGLEVLRPALVPGFLKVISHNIRHGNRDLQLFEVARGFQSLAAGECRSESPLD 588 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA------KADAL--SVI-- 629 Q+Y+ I GS R+W ++S E+ F DL A K + L SV+ Sbjct: 589 AYSEQEYLVLAI-TGSR----FPRIW-NQSSEKVDFYDLMGAVEMLLEKLNLLDKSVVNI 642 Query: 630 --EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 E VS+D E G Y R+G+++ +LG F G Sbjct: 643 YNENTVSIDVQLTEKGRSCSY---RAGVVQRLDSNLLGKFD----------------IGQ 683 Query: 688 EVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLID 745 +VY+ + + + + V + S V+RD++ ++ + +LV ++++ D LI Sbjct: 684 DVYIAELDAAALESCFSSGVTYEPPSRFPVVQRDISLVLPPDVTVQSLVELVRSSDSLIR 743 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+VFD+F+ G++SVA+ + I T +D+ I ++ ++ N K AV+R Sbjct: 744 GVSVFDLFERTREDGGERSVALSLEIADHAGTLQDERISDILSKVGSNAASKLGAVIR 801 >gi|326801340|ref|YP_004319159.1| phenylalanyl-tRNA synthetase subunit beta [Sphingobacterium sp. 21] gi|326552104|gb|ADZ80489.1| Phenylalanyl-tRNA synthetase beta chain [Sphingobacterium sp. 21] Length = 799 Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 246/836 (29%), Positives = 412/836 (49%), Gaps = 72/836 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + TD + ++ LT IGLEVE V+ + L+ I +V + +++P Sbjct: 1 MKISYNWLKQFISTDKNPNELSQILTDIGLEVEGVEEIQGIPGGLTGLVIGEVKTCQQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 + D I +D G+ + +VCGAPNV G +G P P +N KI Sbjct: 61 NADRLRITTVDVGEASLLHIVCGAPNVAAGQKVVVATVGTTVYPLEGEP---FKINKSKI 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI-IDVSLTPNRSDC 168 RG S GM+C+E E+ L IM LP DAPVG D+ + D ++ LTPNR+D Sbjct: 118 RGEVSEGMICAEDEIGLGKSHEGIMVLPADAPVGSLAKDFFGVKDDYCFEIGLTPNRADA 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A D+ A ++K +IS S +P+ + ++++ CK ++ + GV+ Sbjct: 178 ASHLGVARDVAAVLRQEVKLPDISSFKAGSGRLMPVTV----NNTNACKRYSSLSISGVK 233 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++++L+A+GLR I+ +VD+TNYV + G P H FDA +++ + VR A GE Sbjct: 234 VADSPEWLQEKLRAIGLRPINNIVDVTNYVLHELGQPLHAFDADKVAGSHIIVRNAKEGE 293 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD E LS ++++I + + IAG+ GG ++G T +V +E A +D ++I + Sbjct: 294 AFVTLDEVERKLSAEDLMICDEEKPLCIAGVFGGLNSGVTGTTMNVFLESAYFDAVSIRK 353 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 S K + TD+ +RFERG D + LK L++ + GG +S+I KP Sbjct: 354 SSKRHNLKTDASFRFERGTDPDMTVYALKRAALLMVEVAGGEISSEISDIYPAPVKPFVF 413 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEI 463 V+RL G ++ E+ + IL+ L V + V VP ++ DV + D+ EE+ Sbjct: 414 EVNPDNVRRLIGKNITDENIVDILQALQIQVASKDAGVLTVYVPPYKVDVTREVDITEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR---TRYVKRVLASRAMMEVVNWS-----F 515 LRIYG + I+ + Q++ N S + + V L + +E+++ S + Sbjct: 474 LRIYGYNNIEMK----QQIKASLNTSAKPDKEVIQNLVADTLIANGFIEILSNSLTKLAY 529 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 E++V ++ILNP+S+D+ MR +LL L+A N R D +FE Sbjct: 530 ADDEETV--------VKILNPLSSDLDVMRQNLLFSALEAVAYNQKRKNPDLKLFEFGKT 581 Query: 576 YENDTPEGQKYMAAGIRKGSS--GIEGSGRLWSDKSEERCRFVDLFDAKA--DALSVIEP 631 Y +M G+ + + +G + + + + V +D KA DAL Sbjct: 582 Y---------HMVDGVYEEEQQLSLTITGAQHTQQWNQPSQPVSFYDIKAAVDALVKRLN 632 Query: 632 FVSLDSLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 L + ES S+ Y G+ ++K A + + N ++ + N +E Sbjct: 633 IRDLKTEDLESAHFSYGLQYVKGQKTLVKFGA-VSTKALKKADVNGTVYYAVFN----WE 687 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDV 747 + L +I +K + K+V + V+RDL+ ++DQ + L NI + +R L+ V Sbjct: 688 LLLKAI---RKNKITYKEVAKFPA---VRRDLSLLIDQQVTFDALKNIAERTERKLLKSV 741 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VFDV+ G L GKKS A+ +Q + T D I ++ +++ N K+ A +R Sbjct: 742 GVFDVYVGDKLPAGKKSYALSFELQDEEKTLTDKQIDSVIQKLILNFEKEVGAEIR 797 >gi|189501562|ref|YP_001957279.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Amoebophilus asiaticus 5a2] gi|189497003|gb|ACE05550.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Amoebophilus asiaticus 5a2] Length = 806 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 241/835 (28%), Positives = 406/835 (48%), Gaps = 62/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK +++WLK++++ + E+I + LT GLEV +++ + LS I ++++ ++P Sbjct: 1 MKISINWLKEYINFSETPEEISNLLTKGGLEVTHIESFKPIKTDLSTMLIGQIVACTKHP 60 Query: 57 DLD---CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIR 110 + D C + I TGK + +VCGAPNV +G AP G+ + + + + KIR Sbjct: 61 NADKLHCTQIDIGTGK--PLSIVCGAPNVEIGKKVAVAPVGTTLYTHTGECIKIKSAKIR 118 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCI 169 G S GM+C+E E+ L I+ L G LSDY LS D I+ + LTPNR D Sbjct: 119 GEISEGMLCAEDEMGLGPSHEKILWLDTHLSPGTSLSDYFNLSTDKILTIELTPNRIDAC 178 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIP------LEIKFDLDDSSLCKGFAMCCVK 223 G+A DL A L I P + P L IK ++D+ C +A +K Sbjct: 179 SYIGVARDLRA-----LLNKPIQYPATLTIQPQDDKQLLPIKISVEDAIACPRYAGIVIK 233 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 GV+ +P W++ +LK++GL SI+ +VDITN V + G P H FD ++ + VR A Sbjct: 234 GVQVQDSPQWVQAKLKSIGLSSINNIVDITNLVMYELGQPLHAFDYDKLKGKEIHVRLAT 293 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE+I+ LDN + +L+ +VIA ++AGI+GG T+++ +E A + P Sbjct: 294 KGERIVTLDNVDRELTGGEIVIADQQNNIALAGILGGISTSIQSETSNIFLESAYFFPAT 353 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKP 401 I + K+ I TD+ +R+ERG+D + L+ LI + G AS++ KP Sbjct: 354 IRSAAKHHKIQTDAAFRYERGIDPNVAVTALRRAGLLIQEIASGKIASELIDIYPHPIKP 413 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLV 460 I + +++L G +P IL+ L + I F VP +R DV + D++ Sbjct: 414 SHIEVFYTNIQKLIGEALPKTTIHHILQNLDIEITINNQTSFIAIVPPYRVDVTREVDVI 473 Query: 461 EEILRIYGVDQIKSEPLPLTQ-----VEDKRNLSLQQSRTRYVKRVLASRAMMEVV--NW 513 EEILRIYG D I+ LP K L Q RT + +L + E+ + Sbjct: 474 EEILRIYGYDNIQ---LPARMSSTFLAPTKPPLPYQLERT--LAPILTANGYQEICTNSL 528 Query: 514 SFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 SF+ + + ++++LNP+S ++ +R +L+ L+ N++R + D +FE Sbjct: 529 SFVHDGKIADNRTEKTKVKLLNPLSDKLNILRDNLVLSGLEVIAHNINRKLVDLKLFEFG 588 Query: 574 HVYENDTPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVI 629 Y E KY I + GI +G++ W + ++ F DL ++I Sbjct: 589 KTYHQ---EDGKY----IERNKLGIWLTGKIEALNWIRQPKD-VTFQDLN-------TII 633 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 ++ + P ++G+ I G+ L + P+ EV Sbjct: 634 HLLLAKWGVNTFDQKPFSNTIYKAGVELIYQGISFAIMGQVSKQYLQMADANQPVFFAEV 693 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVT 748 +D + + ++ K + S VKRDL+ ++D+HI + N++ + + LI D+ Sbjct: 694 DIDQLSLYPTQKLHYKPI---SKFPLVKRDLSLVIDEHILLEDIKNVLSEQAEPLIQDMY 750 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VFD++QG +L +GKK+ A+ +Q T + I +M R++ + +K A++R Sbjct: 751 VFDIYQGTNLPKGKKAYALSFSLQDKDKTLDEKTIHQVMARLMNDFQQKLGAIVR 805 >gi|118617275|ref|YP_905607.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium ulcerans Agy99] gi|118569385|gb|ABL04136.1| phenylalanyl-tRNA synthetase, beta chain PheT [Mycobacterium ulcerans Agy99] Length = 829 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 252/861 (29%), Positives = 419/861 (48%), Gaps = 89/861 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE- 53 M+ SWL++ + DVS E++ L IG EVE V ++ P T+ +V+ +E Sbjct: 1 MRVPYSWLREVVAAGAPGWDVSPEELEQALVRIGHEVEAVTPVGPVTGPLTVGRVIEIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C++ D G+ + ++VCGA N VG L V A PG+ +P IV VRK Sbjct: 61 LSGFKKPIRACSV---DFGEGEGREIVCGATNFAVGDLVVGALPGTVLPSGFEIV-VRKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G +S GMMCS EL L + + I+ LP A G +D L D + +++TP+R C Sbjct: 117 YGRKSKGMMCSAAELGLGAEHSGILVLPSGTAQPGAAAADILGFDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV- 225 + +RG+A ++ A L + +++ P E+ PL + + + FA+ V G+ Sbjct: 177 MSIRGLAREIACAFDLDFVDPADVAPLPAEGETWPLNVH----PGTGVRRFALRPVTGID 232 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 V+P W+++RL G+R S VD+TNYV L+ G+P H D +RIS +VR A GE Sbjct: 233 PGAVSPWWLQRRLLMCGMRVTSPAVDVTNYVMLELGHPMHAHDRNRISGAFSVRFAWPGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+ E L P +V+I + +I G++G ++TDVL+E A+WD ++R Sbjct: 293 TVVTLDDVERRLDPTDVLIVDEVATTAIGGVMGAASTEVRGDSTDVLLEAAIWDAAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYK 400 + + L + +++ R+ER VD + L +L+ + GG S + Sbjct: 353 TQRRLHLPSEAARRYERSVDPAVSVAALDRCAALLADIAGGAVSPTLTDWRGDPPRDDWS 412 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADL 459 P I R +G+ + R L ++G +++ + V+ PSWR D+++ ADL Sbjct: 413 PPPIRIDADLPDRFAGVVYGPGTTARRLAQIGAEALVDDRAALTVTPPSWRPDLQQPADL 472 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VEE++R+ G++ I S L R L+ Q R R + + LA E++ F+ Sbjct: 473 VEEVMRLEGLEAIPSV---LPSAPAGRGLTAGQRRRRAIGKSLALSGFTEILPTPFLPAG 529 Query: 520 QSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 L+G + ++NP+ AD + T+LLP LL+A GRNV R +AD A++ V+ Sbjct: 530 VFDLWGLAADDPRRATTNVVNPLEADRPQLATTLLPALLEALGRNVSRGLADVALYAVAQ 589 Query: 575 VYE--------------------------NDTPEGQKYMAA---GIRKGSSGIEGSGR-L 604 V + P +++AA G+R+ G G GR + Sbjct: 590 VVQPTDQTRGIELIPVHRRPTDGEIAALDASLPRQPQHVAAVLTGLRE-PRGPWGPGRAV 648 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 + + E R + A+A A+ V+ LR P +HPGR + E V+ Sbjct: 649 EAADAFEAVRII----ARASAVDVM--------LRATQHLP--WHPGRCAEVLVG-EAVV 693 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ G+ HP +++ GL E+ LD+IPI +T +S V +DL+ +V Sbjct: 694 GHAGQLHPAVIERAGLPKGTWALELNLDAIPI-----VETLPAPRVSPFPAVFQDLSLVV 748 Query: 725 DQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + A + + +++ L++D+ +FDVF G +G+ +KS+ + + T +DD Sbjct: 749 AADVSAQMVADAVRDGAGDLLEDLQLFDVFTGPQIGDDRKSLTFALRFRAPDRTLTEDDA 808 Query: 784 RILMDRIVENVVKKTNAVLRS 804 D V+ ++ AVLRS Sbjct: 809 SAARDAAVQCAAQRVGAVLRS 829 >gi|227548140|ref|ZP_03978189.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium lipophiloflavum DSM 44291] gi|227079802|gb|EEI17765.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium lipophiloflavum DSM 44291] Length = 835 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 244/818 (29%), Positives = 388/818 (47%), Gaps = 77/818 (9%) Query: 16 VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAI-LRIDTG 68 VS E++ +G E E E P + +VL +E + P C + + G Sbjct: 22 VSPEELDSGFVRVGFETEGFAPLPETTGPLVVGRVLEIEELEGFKKPIRYCQVDVGQANG 81 Query: 69 KHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + ++CGA N G L V + PG+ +P ++ R+ G S GMM SE EL + Sbjct: 82 TGEPQGIICGARNFSEGDLVVVSLPGAVLP-GGFEISARETYGKISNGMMASEAELGFTA 140 Query: 129 DSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLK 187 S I+ L A G + L D + +V++TP+R + RG+ ++ AA + Sbjct: 141 KSDGIIVLEGGAASPGEDAREVLGGPDTVFEVNITPDRGYALSARGLTREVAAAFDLSYR 200 Query: 188 EINISCPLSS---ESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLK 239 ++ ++ +P I+ +++S+ + F + V G+ AP W+++ L Sbjct: 201 DVAADPAVAGIDLTRVPAPTGELIEVTVEESAKAQRFGLRKVVGIDPKAQAPFWLKRILM 260 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 G+RS++A D+TNYV L G P H FDA ++S L V A GE LD+ + L+ Sbjct: 261 LSGVRSVNAATDVTNYVMLLLGQPMHAFDADKVSGNLRVHNARDGETFETLDHAKRTLTA 320 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 D+VVI+ D IQS+A I+GG + D TT V E A WD + +ARS ++ + +++ R Sbjct: 321 DDVVISDDNGIQSLAAIMGGTTSEISDETTSVYFEAASWDALTVARSARHHKLSSEASRR 380 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDI-CIARNITYKPRKIVFMNSEVKRLSGID 418 FERGVD + L +L++ GG D + + +P I ++ L G+D Sbjct: 381 FERGVDPALVEVALDVACALLVDFAGGEIVDKRTLVGEVAERP-AIEMDSARPGDLIGVD 439 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 P E +R LE +G V G+ + V P+WR D+ DLVEEI+R+ G+D+I PL Sbjct: 440 YPRETVVRRLEEVGCRVEGDGEALTVYPPTWRTDLSVPVDLVEEIVRLEGLDEI---PLI 496 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-----QRELEI 533 L R LS QQ R R V LA +EV+ FI+ + ++G + + + Sbjct: 497 LPAPRGGRGLSPQQRRRRAVTHALAYSGYVEVIPTPFIANDTFDVWGLAADDERRHAVRV 556 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--------------- 578 NP+ D + T++LP +L+A GRNV R D A++ V+ V Sbjct: 557 QNPLDKDYGIIGTTVLPSMLEAVGRNVARGKRDLALYSVAQVAVARAELSPMPSVAARPS 616 Query: 579 --------DTPEGQKYMAAGIRKGS---SGIEGSGR--LWSDKSEERCRFVDLFDAKADA 625 D+ Q AA + G +G G GR W+D E R V A+A Sbjct: 617 DETIRELVDSLPKQNLHAATVATGQWEHAGPLGGGRDYTWADAVES-ARVV----ARAAG 671 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 + LR E+ A +HPGR +K ++V+G+ GE HP IL+ L C Sbjct: 672 V----------ELRVEAAAELPWHPGRCAALKV-GDVVVGFAGELHPEILEALELPARTC 720 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLI 744 E+ L ++P+ LSS + +D+A +VD+ I A + + + L+ Sbjct: 721 AMEIDLTALPLDAVLPAPV-----LSSFPALNQDIALVVDEGIAAEDVRRAVEEGAGELV 775 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + V +FDV++ LGEGKKS+A ++ + T +D+ Sbjct: 776 ESVKLFDVYRSAQLGEGKKSLAFGLVFRAPDRTLTEDE 813 >gi|227892810|ref|ZP_04010615.1| phenylalanine--tRNA ligase [Lactobacillus ultunensis DSM 16047] gi|227865451|gb|EEJ72872.1| phenylalanine--tRNA ligase [Lactobacillus ultunensis DSM 16047] Length = 804 Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 237/819 (28%), Positives = 410/819 (50%), Gaps = 57/819 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQDPHALAEKITRTGVEIADVKHPEEGLKKLVVGKVLDCKAVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P DA V G + + L + D I+D +TPNR+D +G+ Sbjct: 120 GLQEIGFNDSVVPEEFADGIYVFPEDADVKPGQDVYEALGMDDYILDFDITPNRADTLGM 179 Query: 172 RGIALDLVAAGLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A ++ A K K ++ P ++S+ ++ D+ L F + + GV+ Sbjct: 180 EGAAYEVGAIVDQKPKIEDVVLKEDGPDWTDSLDAKV-----DAKLAPKFYLRKLTGVKI 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P WM++RL G+R I+ +VD+TNYV L G P H +DA + L VR A GEK Sbjct: 235 QDSPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKTFAGGKLEVRLANKGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ +E +L P +++I + +AG++GG ++ +TTDV++E A++DP + ++ Sbjct: 295 LTLLNEKEVELDPHDIIITDGEKPVMMAGVMGGLNSEITADTTDVILESAIFDPTLVRKA 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIV 405 T++ R+E+G + + L+ + T + I A + KP + Sbjct: 355 AFRHANRTEASSRYEKGTNWDATEKAINMAALLLRNDAQATVDEGIIKATDTQRKPVAVK 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S + ++ G ++ ED L+I +RLGFSV + D V VP+ R D+ ADLVEE+ R Sbjct: 415 TTVSYINKVLGSEISPEDMLKIFDRLGFSVDRDGDDITVHVPNRRWDISIPADLVEEVGR 474 Query: 466 IYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D +KS +PL E S ++ R +K ++ + +ME +++S S E++V + Sbjct: 475 IYGYDNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRY 531 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TP 581 +++ ++ P+++ S MR +L+ GL+ A N R A+FE VY++D T Sbjct: 532 TKDPKDIVKVQWPLNSSRSVMRQNLMTGLVDAASYNFARKQTQLALFEQGRVYDHDGGTY 591 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEE------RCRFVDLFDAKADALSVIEPFVSL 635 +++AA + G++ E W +++ + + +LFDA I+P Sbjct: 592 NEHEHLAA-LYAGNTFAEN----WQHLTQKVDFYFVKGQLTNLFDAVG-----IDP---- 637 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL--DFFGLSNPICGFEVYLDS 693 + + + + HP R+ I + V G G + D + + G+E+ LD+ Sbjct: 638 EKVVYRAEGIEGMHPTRTAGIYIDKQYV-GMIGMIAHAVTFADKALRGSELYGYEINLDT 696 Query: 694 -IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 IP+ K T ++RDL+ + D+++ + N+IK N + + D+ V D Sbjct: 697 IIPMLTKGMTAQPA----PKFPAIERDLSLLTDKNVTNQEVENVIKSNAGKYLVDLKVID 752 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 V++G + GKKS+A + KDT D + MD+I Sbjct: 753 VYEGNHIDTGKKSLAYSLTFLNRKDTLTDKVVNNAMDKI 791 >gi|88855460|ref|ZP_01130124.1| phenylalanyl-tRNA synthetase, beta subunit [marine actinobacterium PHSC20C1] gi|88815367|gb|EAR25225.1| phenylalanyl-tRNA synthetase, beta subunit [marine actinobacterium PHSC20C1] Length = 826 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 241/812 (29%), Positives = 394/812 (48%), Gaps = 50/812 (6%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 +SWL++ ++ D++ E++ L +G E E V + E P + +V+ P + Sbjct: 1 MSWLREFVEIPADITHEQVHAALVKVGFEEEDVHDFEISGPVVVGQVVEFVGEPQSNGKT 60 Query: 63 L---RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++D G+ + +VCGA N VG V PGS +P + RK G S GM+ Sbjct: 61 INWCQVDVGEAEPRGIVCGAHNFAVGDKVVVTLPGSVLP-GPFPIAARKTYGHVSDGMIA 119 Query: 120 SEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL L D+ I+ L +D +G + L L D +++++TP+R + +RG+A Sbjct: 120 STRELGLGDEHDGILVLSSLGLDPEIGTNAIELLGLDDFAVEINVTPDRGYAMSIRGVAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-----AP 231 + A G P +E+ + + + +G V V NV P Sbjct: 180 EF-ALSTGATYTDPAGAPTLTEASGYSVVVNDESPIRGRGGVRAFVTRVVRNVDVTKPTP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 +WM RL G+RSIS VDITNYV L+ G P H +D R+S LTVRRA +GE + LD Sbjct: 239 SWMITRLTLAGIRSISLTVDITNYVMLELGQPIHAYDLDRVSGGLTVRRALAGETLTTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L+P++++I D +AG++GG D +T+VL+E A ++PI+IAR+ + Sbjct: 299 AKLRTLNPEDLLITDDSGPIGLAGVMGGASTEITDASTNVLIEAANFEPISIARTARRHK 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 + +++ RFERGVD +V L++ L GG+ + + P I V Sbjct: 359 LGSEASRRFERGVDPLVAPAAAARVVELLVELGGGSVDTLGSDLLSEHAPEAIELPEEYV 418 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + L G+ ++ L +G V + V+ PSWR D+++K L EE+ RI G D+ Sbjct: 419 EGLIGVRYSADEITDSLTAIGTHVEVTASGWRVTPPSWRPDLDDKTTLAEEVARIVGYDR 478 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG----GG 527 I S LP+ R LS Q R V LA+ + EV+ + FIS + LFG GG Sbjct: 479 IPSV-LPVAP--PGRGLSRAQRLRRIVANSLAASGLTEVLAYPFISTASNELFGSPFAGG 535 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKY 586 E+ + N + D ++MR SLLPGL RNV R + D A+FEV V+ PE G+ Y Sbjct: 536 VAEIRLANALDPDAASMRRSLLPGLTVIAHRNVSRGLTDVALFEVGTVF---LPEAGRAY 592 Query: 587 MAAGIRKGS--------SGIEGS--GRLW-------SDKSEERCRFVDLFDAKADALSVI 629 + + G S + GS + W D + + ADALS + Sbjct: 593 GSGDLPVGYELPSDSALSELHGSVPAQPWHVAALFVGDAVTRQPGQQAVSRGLADALSTV 652 Query: 630 EPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + S S++ E +G+ HPGR+ ++ + V+G+ GE P + L + Sbjct: 653 QQLASTLSVQIEVVTGSHQAMHPGRTAELRV-GDSVVGFAGELLPALAAELDLPRVVALV 711 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDD 746 E+ L+++ S +V S +D++ +V + + AG +++II+ L++D Sbjct: 712 ELDLNALIESAAVDVAATPIV---SFPAATQDVSLVVPEAVEAGAVLSIIREGAGELLED 768 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 V + D ++G + EG+KS+ + + + T Sbjct: 769 VRLVDDYRGAGIPEGRKSLTFALRFRAVDRTL 800 >gi|118443659|ref|YP_877841.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium novyi NT] gi|118134115|gb|ABK61159.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium novyi NT] Length = 791 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 239/827 (28%), Positives = 424/827 (51%), Gaps = 60/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M ++WLKD++D ++S +++ D LT G +VE+V + ++ K++ +E++PD + Sbjct: 1 MLVPVNWLKDYVDINISPQELGDALTLSGSKVEEVIVTGDVINKVVTGKIIKIEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDVNAEEPIQIVTAATNMKEQDVVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 119 Query: 119 CSEKELMLSDDS--ASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP + P+G + + ++L ID +T NR DC+ + GIA Sbjct: 120 CSEEELGIAGDEPVVGLMILPENTPLGKEMKEVIDLEKASIDFEITSNRPDCLSIIGIAR 179 Query: 177 DLVAA-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A G K I +SE+I +K ++ D+ LC+ + +K V+ +P+WM+ Sbjct: 180 EVAATLGTSYRKPITEYKVQNSENINNTLKVEVKDN-LCRRYMARGIKNVKIAPSPSWMQ 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL G+R I+ +VDITN+V ++ G P H FD I S+ + V RA +GEK + LD +E Sbjct: 239 ERLLEAGVRPINNIVDITNFVMIELGQPMHAFDRREITSNTIVVERAKNGEKFITLDEEE 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ + + I R ++AGI+GG ++ ++TT+V+ E A +D NI S K L + T Sbjct: 299 RELNEEILNIKDGDRTIALAGIMGGLNSEVKEDTTEVVFECANFDGTNIRVSSKKLNLRT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ +FE+ +D + + LI L G + I K V ++S + R Sbjct: 359 EASGKFEKDLDPNAVEEAMNRACHLIEELGAGEIMEGTIDVYNEKKETHTVTVDSNWINR 418 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+ E L+RL S D+ ++VP++R D+ + D+ EEI RIYG + ++ Sbjct: 419 FLGTDISKEQMKEYLDRLELSTEISGDELVITVPTFRCDINIREDVAEEIARIYGYNNVE 478 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS---------KEQSVLF 524 + +P + + Q + + V ++AS + + + +SF+S E S L Sbjct: 479 T-TIPSVETLRGGKSTKQLLQDKIVDTLIAS-GLNQSIAYSFVSPKVFDKILVPEDSEL- 535 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----END 579 ++ + I NP+ D S MRT+ +P ++++ RN R + +FE+ VY E + Sbjct: 536 ---RKVVTIRNPLGEDYSIMRTTSIPSMMESLSRNYSRNNDEVRLFEIGKVYIPNEDETE 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 PE + ++ G+ VD D K ++I+ ++ ++ Sbjct: 593 LPEERNIISLGMYGN---------------------VDYLDIKGVVENIIDAL-GVEKVK 630 Query: 640 F--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 F ES PS +HPG++ + E V G GE HP++ + + + E+ +D + Sbjct: 631 FQRESENPS-FHPGKTAALYIKKEFV-GVVGEIHPDVAENYEVDERCYVAELNMD---VL 685 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 K KK L V RDLA +VD+ I + ++I+N +L++ +FDV++GK Sbjct: 686 LKHAKVQKKYTPLPKFPAVTRDLAVLVDRDILVQEIQDVIQNQGGKLLESAKLFDVYEGK 745 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + KKS+A ++ + + T D D+ + D+IV+ + K A LR Sbjct: 746 QIPDNKKSIAYSLVYRGDR-TLTDKDVNKVHDKIVKALENKLGAELR 791 >gi|327184005|gb|AEA32452.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1118] Length = 804 Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 234/815 (28%), Positives = 401/815 (49%), Gaps = 47/815 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ +V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQEPHALAEKITRTGVEIAEVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFNDSVVPEEFADGIYVFPEDADVKPGQDVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A ++ A K K ++ P ++S+ +++ D L F + + GV+ Sbjct: 180 EGAAYEVGAIVDQKPKVEDVVLKEDGPDWTDSLDVKV-----DEKLASKFYLRKLTGVKI 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P WM++RL G+R I+ +VD+TNYV L G P H +DA + L VR A GEK Sbjct: 235 QDSPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKTFENGKLEVRLANKGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ +E +L P ++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 295 LTLLNEKEVELDPKDIVITDGEKPVMMAGVMGGLNSEITSETTDVILESAIFDPTLVRKA 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIV 405 T++ R+E+G + + L+ + T + I A + +P + Sbjct: 355 ALRHANRTEASSRYEKGTNWDATEKAINMAALLLRNDASATVDEGIIKAADTKREPVAVK 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S + ++ G ++ ED L+I +RLGF V + D V VP+ R D+ ADLVEE+ R Sbjct: 415 TTISHINKVLGSEISPEDMLKIFDRLGFPVDRDGDDITVHVPNRRWDISIPADLVEEVGR 474 Query: 466 IYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D +KS +PL E S ++ R +K ++ + +ME +++S S E++ + Sbjct: 475 IYGYDNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKATRY 531 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ ++ P+++ S MR +L+ GL+ A N R A+FE VY++D Sbjct: 532 TKDPKDIVKVQMPLNSSRSVMRQNLMTGLVDAASYNFARKQTQLALFEQGRVYDHD---- 587 Query: 584 QKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 GI + SG +++ + + VD + K ++ + + + + + Sbjct: 588 -----GGIYNEHEHLAALYSGNTFAENWQHLTQKVDFYFVKGQLTNLFDAVGIDPEKVVY 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGLSNP-ICGFEVYLDS-IPIS 697 + + HP R+ I + V G G H L L N + G+E+ LD IP+ Sbjct: 643 RAESIEGMHPTRTAGIYIDKQYV-GMIGMIAHAVTLSDKALRNAELYGYEINLDVIIPM- 700 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK V ++RDL+ +VD+ + + N+IK N + + D+ V DV++G Sbjct: 701 ---LTKGMTAVPAPKFPAIERDLSLLVDKEVTNQEVENVIKSNAGKYLVDLKVIDVYEGS 757 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L KKS A + KDT D + MD+I+ Sbjct: 758 HLAADKKSFAYNLTFLNRKDTLTDKVVNNAMDKII 792 >gi|306819011|ref|ZP_07452728.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus mulieris ATCC 35239] gi|304648204|gb|EFM45512.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus mulieris ATCC 35239] Length = 878 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 270/897 (30%), Positives = 403/897 (44%), Gaps = 112/897 (12%) Query: 1 MKF-TLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WLK + L ++ L +GLE E + P KVL +E Sbjct: 1 MAFVSIEWLKRWCEVPAGLTAAQLAKDLVKVGLEEETIHTSGVTGPLVCGKVLRMEPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGAEFNDAPGAGKEPSDVASRSIICGAHNFKEGDHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASI-----------MELPIDAPVGGRLSDY 149 + + RK G S GM+CS +EL L +D I ME+P PVG L Sbjct: 120 DFRIATRKTYGHISDGMICSARELGLGEDHNGIIVLEEYLGERGMEVP---PVGTDLLGM 176 Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEI----NISCPLS---SESIPL 202 L L+ ++++++TP+R C +RG+ + + + N+ PL+ + P+ Sbjct: 177 LGLNHELLEINITPDRGYCFSMRGVGREYSHSTGAAFTDWGLAENLKNPLAEANNSGFPV 236 Query: 203 EIKFDLDDSSL-----CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYV 256 EI DD+ + C F V+G P WM RL++ G+RSIS VD+TNYV Sbjct: 237 EIT---DDAPIRGNVGCDRFVTRMVRGFNPKAKTPEWMVTRLESAGMRSISLAVDVTNYV 293 Query: 257 SLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQ 311 LD G P H +D ++ + VRRA GEK LD E L P+++++ R+ Sbjct: 294 MLDLGQPMHAYDLDKVKGSIVVRRARDGEKHTTLDEVERSLYPEDLLVTDCKGGHAARVL 353 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 IAG++GG TT+VL+E A +D +++AR+ + I ++S RFERG D Q + P Sbjct: 354 GIAGVMGGAETEITAATTNVLLEAAHFDAVSVARAARRHKIPSESSRRFERGTDPQ-LPP 412 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILER 430 V + +L GG D I P V + + RL G++ E +L+ Sbjct: 413 VAAQYAAELLVEYGGGVIDEGITDVNHSAPMPSVTLGFDAASRLIGVEYSAERCEELLKA 472 Query: 431 LGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRN 487 +G + F V+ PSWR D+ A LVEEI R+ G DQI S P+ + Sbjct: 473 IGCQTCRDDSAKAFTVTPPSWRPDLVGAAHLVEEIARLDGFDQIPSLVPVGPAAI----G 528 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQR-ELEILNPISADMSN 543 L R + LA + EV+ + F+ E Q +R + + NP++ D Sbjct: 529 LPAVLCTRREISDTLAEAGLTEVMTYPFLGDEHDRQGFPVDDPRRVTVRLANPLADDAPA 588 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMAA 589 +RTS+L LL RNV R AI+E+ V + E + + A Sbjct: 589 LRTSVLDTLLNTASRNVARGNQRVAIYELDQVALAHGVVPAAIPGVEHRPSDEEMQALRA 648 Query: 590 GIRKGSSGIEGSGRLWSDKSE----ERCRFVDLFDAKADALSVI----------EPFVSL 635 G+ K + + L S+ +E + R D DA A A+ V P V Sbjct: 649 GMPKQPWRV--AAVLASNATEAYPGQPARAWDWADAIALAMRVATSQGLTVRSEAPNVKC 706 Query: 636 ---DSLRFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEV 689 D +S AP +HPGR I+ AE VLGY GE HP + FGL C FE+ Sbjct: 707 GGNDGKATQSVAP--FHPGRVAQIRVGAETGGKVLGYAGELHPQVCREFGLPERSCAFEI 764 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDV 747 LD+I +K R K + S PV K D AF+VD + A + N I K ++ V Sbjct: 765 DLDAI---EKARPKGAFQLRAVSTFPVAKEDFAFVVDTDVAALKVQNAIAKAAGDALESV 821 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD F G+ LG+GKKS+A + ++ T DIR + R++ V K A LR+ Sbjct: 822 HLFDSFTGEQLGQGKKSLAFALRLRAADHTLNPQDIREIRQRVIAKVQKTCRATLRA 878 >gi|284033326|ref|YP_003383257.1| phenylalanyl-tRNA synthetase subunit beta [Kribbella flavida DSM 17836] gi|283812619|gb|ADB34458.1| phenylalanyl-tRNA synthetase, beta subunit [Kribbella flavida DSM 17836] Length = 877 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 262/900 (29%), Positives = 422/900 (46%), Gaps = 122/900 (13%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ LSWL+++ L V+ ++ + L GLEVE VD + P + KVLS E P Sbjct: 1 MRVPLSWLREYVELPDGVTGRQVAEKLIRAGLEVETVDESDLTGPLVVGKVLSYEPEPQK 60 Query: 59 DCAILR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + +R +D GK + VVCGA N VG L V PG+ +P ++ RK G S Sbjct: 61 NGKTIRWCSLDIGKDEPQWVVCGADNFEVGDLVVVVLPGAVLP-GGFAISARKTYGHVSA 119 Query: 116 GMMCSEKELMLSDDSAS--IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 GM+CS EL L DD + ++ P + G + L L D ++D+++TP+R C+ +RG Sbjct: 120 GMICSSSELGLGDDGSGGIVVLQPGEGTPGDDAIELLGLRDDVLDIAVTPDRGYCLSIRG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV- 229 +A + A +LK+ + L+ E P+ + DD++ C F V G+ Sbjct: 180 VAREAATAYGVELKD-PAALTLTGEQQGGYPVRV----DDAAACSVFVTRTVTGIDATAP 234 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++QRL A G+R IS VD+TNYV L+ G P H +D +R+S + VRRA +GEK++ Sbjct: 235 SPRWLQQRLTAAGMRPISIGVDVTNYVMLELGQPIHGYDQARLSGDIVVRRANAGEKLMT 294 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD+Q +L ++++I D IAG++GG TTDV++E A +DPI IAR+ + Sbjct: 295 LDDQTRELDAEDLLIVDDSGPIGIAGVMGGASTEISAATTDVVIEAAHFDPIVIARASRR 354 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +++ RFERG D + + L+ L GGT + +P +VF Sbjct: 355 HKLSSEASRRFERGADPALPRYAAQRVADLLAELAGGTILPDETVVDTHAQPTPVVFRAD 414 Query: 410 EVKRLSGIDVPIEDSLRILERLG--------------FSVIGEYD------------KFE 443 R++G +PIE ++R L +G F+V E +F Sbjct: 415 HAARVAGAPIPIEHTVRHLRSVGCTVATAPAGAKASAFAVGSEASTTFAGDPSGGEIEFA 474 Query: 444 VSV---------------------------PSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 VS PSWR D+ + D EE++R++G D + P Sbjct: 475 VSAAFAGGSLTAGAAGADQLTGTDLLTVTPPSWRPDLRDPNDFAEEVIRLFGYDNV---P 531 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-----QREL 531 L + L++ Q R R + L + EVV++ F+ + G + + Sbjct: 532 SVLPSAPGGQGLTVSQRRRRRIATALVGAGLSEVVSYPFVGEADFDAMGLAADDPRRSTV 591 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------- 576 ++NP+S + +++T+LLP LL+ RNV R +D AIF+ S V+ Sbjct: 592 TLVNPLSDEEPSLQTTLLPTLLRTAERNVGRGSSDLAIFQTSLVFKPRRDAGPAPLPSVA 651 Query: 577 ------ENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 E D+ PE ++ A + G+ G W K++ + A+ A Sbjct: 652 QRPTDAEIDSLYAALPEQPLHLGA-VLTGARTPTG----WWGKAQPVTWADAVQVARTVA 706 Query: 626 LSV-IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +V +EP LR AP +HPGR + V+G+ GE HP + FGL Sbjct: 707 AAVGVEPV-----LRNVELAP--WHPGRCAELSVGG-TVIGHAGELHPKVCQAFGLPARS 758 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNIIKNVDRL 743 E+ LD++ I+ + T + SS K D+A IV +P A + + L Sbjct: 759 SAVELDLDAL-IAAGPSSVTAR--PFSSYPVAKEDVALIVAADVPAAEVEAALAEGAGEL 815 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ + +FDV+ G+ +G+GKKS+A + + T ++ ++ V+ V + AV R Sbjct: 816 LESIRLFDVYTGEQIGDGKKSLAFALRFRAQDRTLKESEVAETRQAAVQVAVDRFAAVQR 875 >gi|238917267|ref|YP_002930784.1| phenylalanyl-tRNA synthetase [Eubacterium eligens ATCC 27750] gi|238872627|gb|ACR72337.1| phenylalanyl-tRNA synthetase [Eubacterium eligens ATCC 27750] Length = 808 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 242/845 (28%), Positives = 403/845 (47%), Gaps = 97/845 (11%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +L+W+K + + + ++ D +T G +VE + + L + ++LSVER+PD Sbjct: 1 MNTSLNWIKAMVPGLECTDQEFRDAMTLSGTKVECFNAFDKNLDKIVVGQILSVERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP------------PGSCIPENNMIVN 105 D I +++ G + +Q+V GAPN+ VG G P G +PE+ + + Sbjct: 61 DKLVICQVNVG-SENVQIVTGAPNIEVGSSGQKVPVVLDGGKVAGGHDGGALPEDGIKIK 119 Query: 106 VRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG+ES GMMCS +EL S + I DA VG +YL L+D + + Sbjct: 120 KGKLRGVESCGMMCSIEELGSSREFFPDAPEEGIYIFGDDAVVGSSAVEYLGLNDTVFEY 179 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 +T NR DC V GIA + A ++ + E + + D++ LC + Sbjct: 180 EITNNRVDCYSVIGIAREAAATFRKPFNPPVVTKTGNDEDVNTMVSVDIEAKELCSRYVA 239 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 VK +R +P WM+QRL G+R I+ +VDITNYV + G P H +D I+ + V Sbjct: 240 RVVKNIRLAPSPKWMQQRLMTAGIRPINNIVDITNYVMEEYGQPMHAYDYDTIAGHKIVV 299 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A GEK + LD QE L ++I + IAGI+GG+++ D+ +L E A + Sbjct: 300 RTATDGEKFVTLDGQERTLDAQTLLICDGEKPVGIAGIMGGENSMITDDVQTMLFEAATF 359 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 D NI ++ K +G+ TD+ +FE+G+D + + + LI L G + A ++ Sbjct: 360 DGTNIRKTTKKIGLRTDASGKFEKGLDPENAMEAINRACQLIEELDAGDV--VGGAVDVY 417 Query: 399 YKP---RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDV 453 P +++ F ++ L G DV ED L ERL EYDK E+ +P++RQD+ Sbjct: 418 PDPVTKKRLPFEPAKYNALLGTDVSDEDMLSYFERLEV----EYDKDANELIIPTFRQDL 473 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVN 512 AD+ EE+ R +G D I P L + E +S +QS V + + Sbjct: 474 NRDADIAEEVARFFGYDNI---PTTLPKGETTMGKISFEQSIEDAASEVAQFTGFSQAMT 530 Query: 513 WSFISKE---------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 +SF S + SV ++ + I NP+ D S MRT + G+L + N +R Sbjct: 531 YSFESPKVFDKLKLPADSVY----RKTVVISNPLGEDFSVMRTLPIHGMLTSLSTNYNRR 586 Query: 564 IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-------V 616 + ++E++ V Y+AA ++ +ER F V Sbjct: 587 NKNVKLYELAKV----------YLAADD-------------VNELPDERVEFTLGAFGSV 623 Query: 617 DLFDAKADALSVIEPFVSLDSLR------FESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 D + K VIE F+ ++ ++G P + HPGR + A+ +GY GE Sbjct: 624 DFYSMKG----VIEEFLEKIGMKKKPTYDAKAGIP-FLHPGRQADV-YYADKKIGYIGEL 677 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP++ D + + + V +D IP + + KK ++ V RD++ ++ + +P Sbjct: 678 HPDVADTYSIGERT--YIVVID-IPTVTEMASFDKKFTGIAKFPAVTRDISMVMPKELPV 734 Query: 731 GTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 G + II K ++++ +FD+++G + EG KSVA + + T D DI +M++ Sbjct: 735 GEVEKIIEKRGGKILESYNLFDIYEGSQIKEGFKSVAYSIAFRAKDRTLEDKDITPVMEK 794 Query: 790 IVENV 794 I +++ Sbjct: 795 IFKDL 799 >gi|86130101|ref|ZP_01048701.1| phenylalanyl-tRNA synthetase beta chain [Dokdonia donghaensis MED134] gi|85818776|gb|EAQ39935.1| phenylalanyl-tRNA synthetase beta chain [Dokdonia donghaensis MED134] Length = 808 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 251/846 (29%), Positives = 415/846 (49%), Gaps = 81/846 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK +D D EK + LT +GLE+E +D ++ L I VL+ E++ Sbjct: 1 MKISYNWLKQFIDIDWDAEKTGELLTDLGLEIEGIDTYQSVKGGLEGIVIGHVLTCEQHS 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-PENNMIVNVRK--IRGI 112 + D + +D G +Q+VCGAPNV G A G+ + E ++K IRG Sbjct: 61 NADKLKVTTVDIGAEAPVQIVCGAPNVAAGQKVPVATIGTTLYTEEGEAWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L G + E+ +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGKSHDGIMILDEALVPGTPAAQVFEIENDQVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEIN---ISCPLSSESIPLEI-KFDLD--DSSLCKGFAMCCVKGV 225 G+A DL A L K EIN I+ SS I + K D+D DS +A + G+ Sbjct: 181 WGVARDLKAGLLQK--EINKGLITPSTSSFKIEKRVHKIDVDVLDSEKAPRYAGVVISGL 238 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 + +P W++ RLKA+GL I+ +VD TNYV + G P H FD S+I+ + + VR +G Sbjct: 239 KVEDSPEWLQHRLKAIGLSPINNIVDATNYVLHELGQPLHAFDLSKITGEKIEVRTLEAG 298 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K LD E +L D+++I + IAG+ GG H+G +NT + +E A ++P+ + Sbjct: 299 TKFTTLDGVERELHEDDLMICDAEKPMCIAGVFGGLHSGVSENTNAIFLESAYFNPVAVR 358 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K G+ TD+ +RFERG+D L LI+ + GG + + + P+KI Sbjct: 359 KTAKRHGLNTDASFRFERGIDPNITEYALTRAAILIMEIAGGEIT----SEIVDIYPKKI 414 Query: 405 ----VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKAD 458 VF+N +L G ++P E IL L + + +++P++R DV +AD Sbjct: 415 EDQQVFLNFDNTTKLIGQELPREVIKEILMSLDIKINNVTESGIGMTIPAFRNDVTREAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-------LASRAMMEVV 511 ++EEILR+YG + I +K N ++ + RV LA++ E++ Sbjct: 475 VIEEILRVYGYNNI--------SFGNKLNATVSSTSKFDDHRVSDVVGNQLAAQGFYEMM 526 Query: 512 NWSFISKEQSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 S + + L + +E+LNP+ ++S MR S+L L+A N++R +D + Sbjct: 527 ANSLTTPAYTALSENLKEAYNVEMLNPLGKELSVMRQSMLFSGLEAISYNINRRRSDLKL 586 Query: 570 FEVSHVYENDTPEGQ--KYMA---AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE Y N E + K++A G R S W++ S + F K Sbjct: 587 FEFGKTYHNYPGERKEDKHLALFVTGNRTDES--------WANTSAP----TNFFYLKGV 634 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG-----YFGEFHPNILDFFG 679 +++ L+ R S + ++ + + + LG +G N+L F Sbjct: 635 VTALLG---KLNIARLRSASV------KNDLFSEAVGLSLGKQDVVTYGIVKKNVLKKFD 685 Query: 680 LSNPICGFEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 +S + + D++ I+ + + K++ + V+RD A ++D I + I K Sbjct: 686 ISQDVYFADFNWDAVLEIAARNKVVFKEIPKYPA---VRRDFALLLDTKIQFEEIETIAK 742 Query: 739 NVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + +L+ DV +FDV++GK+L EGKKS A+ L+Q T D +I +M+++ + K+ Sbjct: 743 QTEKKLLKDVNLFDVYEGKNLPEGKKSYAVSFLLQDENKTLTDKNIDKVMNKLQQRFEKE 802 Query: 798 TNAVLR 803 A LR Sbjct: 803 LGATLR 808 >gi|307700352|ref|ZP_07637392.1| phenylalanine--tRNA ligase, beta subunit [Mobiluncus mulieris FB024-16] gi|307614563|gb|EFN93792.1| phenylalanine--tRNA ligase, beta subunit [Mobiluncus mulieris FB024-16] Length = 878 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 268/895 (29%), Positives = 399/895 (44%), Gaps = 108/895 (12%) Query: 1 MKF-TLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WLK + L ++ L +GLE E + P KVL +E Sbjct: 1 MAFVSIEWLKRWCEVPAGLTAAQLAKDLVKVGLEEETIHTSGVTGPLVCGKVLRMEPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGAEFNDAPGAGKEPSDVASRSIICGAHNFKEGDHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASI-----------MELPIDAPVGGRLSDY 149 + + RK G S GM+CS +EL L +D I ME+P PVG L Sbjct: 120 DFRIATRKTYGHISDGMICSARELGLGEDHNGIIVLEEYLGERGMEVP---PVGTDLLGM 176 Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEI----NISCPLS---SESIPL 202 L L+ ++++++TP+R C +RG+ + + + N+ PL+ + P+ Sbjct: 177 LGLNHELLEINITPDRGYCFSMRGVGREYSHSTGAAFTDWGLAENLKNPLAEANNSGFPV 236 Query: 203 EIKFDLDDSSL-----CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYV 256 EI DD+ + C F V+G P WM RL++ G+RSIS VD+TNYV Sbjct: 237 EIT---DDAPIRGNVGCDRFVTRMVRGFNPKAKTPEWMVTRLESAGMRSISLAVDVTNYV 293 Query: 257 SLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQ 311 LD G P H +D ++ + VRRA GEK LD E L P+++++ R+ Sbjct: 294 MLDLGQPMHAYDLDKVKGSIVVRRARDGEKHTTLDEVERSLYPEDLLVTDCKGGHAARVL 353 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 IAG++GG TT+VL+E A +D +++AR+ + I ++S RFERG D Q + P Sbjct: 354 GIAGVMGGAETEITAATTNVLLEAAHFDAVSVARAARRHKIPSESSRRFERGTDPQ-LPP 412 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILER 430 V + +L GG D I P V + + RL G++ E +L+ Sbjct: 413 VAAQYAAELLVEYGGGVIDEGITDVNHSAPMPSVTLGFDAASRLIGVEYSAERCEELLKA 472 Query: 431 LGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRN 487 +G + F V+ PSWR D+ A LVEEI R+ G DQI S P+ + Sbjct: 473 IGCQTCRDDSAKAFTVTPPSWRPDLVGAAHLVEEIARLDGFDQIPSLVPVGPAAI----G 528 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQR-ELEILNPISADMSN 543 L R + LA + EV+ + F+ E Q +R + + NP++ D Sbjct: 529 LPAVLCTRREISDTLAEAGLTEVMTYPFLGDEHDRQGFPVDDPRRVTVRLANPLADDAPA 588 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMAA 589 +RTS+L LL RNV R AI+E+ V + E + + A Sbjct: 589 LRTSVLDTLLNTASRNVARGNQRVAIYELDQVALAHGVVPAAIPGVEHRPSDEEMQALRA 648 Query: 590 GIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVI----------EPFVSL-- 635 G+ K + +G + R D DA A A+ V P V Sbjct: 649 GMPKQPWRVAAVLAGNATEAYPGQPARAWDWADAIALAMRVATSQGLTVRSEAPNVKCGG 708 Query: 636 -DSLRFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEVYL 691 D +S AP +HPGR I+ AE VLGY GE HP + FGL C FE+ L Sbjct: 709 NDGKATQSVAP--FHPGRVAQIRVGAETGGKVLGYAGELHPQVCREFGLPERSCAFEIDL 766 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTV 749 D+I +K R K + S PV K D AF+VD + A + N I K ++ V + Sbjct: 767 DAI---EKARPKGAFQLRAVSTFPVAKEDFAFVVDTDVAALKVQNAIAKAAGDALESVHL 823 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD F G+ LG+GKKS+A + ++ T DIR + R++ V K A LR+ Sbjct: 824 FDSFTGEQLGQGKKSLAFALRLRAADHTLNPQDIREIRQRVIAKVQKTCRATLRA 878 >gi|284035220|ref|YP_003385150.1| phenylalanyl-tRNA synthetase subunit beta [Spirosoma linguale DSM 74] gi|283814513|gb|ADB36351.1| phenylalanyl-tRNA synthetase, beta subunit [Spirosoma linguale DSM 74] Length = 814 Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 243/837 (29%), Positives = 403/837 (48%), Gaps = 58/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M+ + WL++ ++ S E++ LT+ GLEVE ++ +A L+ I +VL+ ++P Sbjct: 1 MEVSYKWLQEFIELPESPEEVGKILTATGLEVEGIEKIDAVPGGLAGVVIGQVLTCTKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 D D ++ +D G Q + +VCGAPNV G L+G P + P + KI Sbjct: 61 DADKLSLTTVDVGAEQPLPIVCGAPNVAAGQKVIVALVGATLYPSAGEP---FQIKKAKI 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPV-----GGRLSDYLEL-SDPIIDVSLTP 163 RG S GM+C+E E+ L A I+ L D P G + Y L SD I + LTP Sbjct: 118 RGAASEGMICAEDEIGLGTSHAGIIVLDPDGPASQLPNGTPAARYFNLESDYQIAIGLTP 177 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR D G A DL A L+ ++ + L + ++D++ C +A + Sbjct: 178 NRIDAASHYGTARDLKAVLKRPLRLPSVDA-FAVAGTDLTLDVRVEDATACPRYAGVTLN 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 G+ +P+W++QRL ++GL I+ +VD+TNYV D G P H FDA+RI+ + V+ Sbjct: 237 GLTVGESPDWLKQRLLSIGLNPINNVVDVTNYVCHDLGQPLHAFDAARIAGGKVIVKTLP 296 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G + LD E L+ +++I + IAG+ GG+++G TT + +E A + P + Sbjct: 297 EGTPFITLDGVERKLTATDLMICDAEKPMCIAGVFGGQYSGVSAQTTSIFLESAYFSPTS 356 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKP 401 + ++ ++ G+ TD+ +RFERG+D + LK LI + GGT +S I + Sbjct: 357 VRKTAQHHGLKTDASFRFERGIDPNITVFALKRAALLIQQVAGGTVSSAITDIYPTPIES 416 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 ++ + RL GI + + RILE L + D F VP +R DV +AD++ Sbjct: 417 FRVPVRYRNIDRLIGIKIDHSEIHRILEALDIQAEEKTDDGFLAIVPPYRVDVTREADVI 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVED------KRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 EEILRIYG+D + PL + D K + QSR V ++LA+ E++ S Sbjct: 477 EEILRIYGLDNV---PLSVNLAADSLSEFPKTDPDQWQSR---VGQLLAANGFYEILTLS 530 Query: 515 FISKE-----QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S L G ++ +LNP+S ++S MR +LL L+ N++R D Sbjct: 531 LTRPAYNDAIRSSLPG---EDVTLLNPLSEELSVMRQTLLFSALETMLYNLNRRQKDLKT 587 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALS 627 FE+ VY + + S I G+ + W K++ F DL A A+ Sbjct: 588 FELGKVYHKVKLDDSTTKYVERVRMSLAILGNQQPENWLQKAQP-VAFHDL----ATAVQ 642 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 I + + + + + G + ++ + LG +P + L P+ F Sbjct: 643 RILNLFRVKAYETQPADTTLFQYGVTYVVNKKPLVSLGL---VNPKLTKLVDLKQPV--F 697 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDD 746 D + + TK + +S V+RDL+ ++DQ I + + + +R L+ Sbjct: 698 YADFDWQALLKLATTKV-RYEEVSKFPEVRRDLSLVLDQAISFEQISKLARQTERKLLRS 756 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V VFDV++G++LG GKK+ ++ ++Q T D I M R++ ++ AV+R Sbjct: 757 VNVFDVYEGENLGAGKKAYSVSFMLQDTAQTLTDATIDKTMQRLMTTFEQELGAVIR 813 >gi|150025120|ref|YP_001295946.1| phenylalanyl-tRNA synthetase subunit beta [Flavobacterium psychrophilum JIP02/86] gi|149771661|emb|CAL43135.1| Phenylalanine--tRNA ligase beta subunit [Flavobacterium psychrophilum JIP02/86] Length = 806 Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 242/835 (28%), Positives = 397/835 (47%), Gaps = 61/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + TD EK LT +GLE+E ++ ++ L + VL+ ++P Sbjct: 1 MKISYNWLKQFIKTDWDSEKTASMLTDLGLEIEAIEKYQSIKGGLEGIVVGHVLTCIQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGI 112 + D I +D G IQ+VCGA NV G A G+ + + + + KIRG Sbjct: 61 NADKLKITTVDLGDGNPIQIVCGASNVAAGQKVPVATIGTILYDKEGKSFEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L G + + +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGHSHEGIMILDEKLTPGTPAAAVFNIENDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A DL A L I + P S E L+I +DD+ L + + ++ Sbjct: 181 WGTARDLKAGMLQNGTNIELITPSVSNFKIEKRTLKIDVKVDDNKLVPRYCGVTISDIKI 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 ++P W++ RLKA+G+ + +VD+TNYV + G P H FDA++I+ + ++ G K Sbjct: 241 GISPAWLQNRLKAIGITPKNNVVDVTNYVLHELGQPLHAFDATKINGKIIIKNVAEGTKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E LS ++++I + IAG++GGK +G NTT + +E A ++ +++ ++ Sbjct: 301 TTLDDVERSLSTEDIMICDENGPLCIAGVLGGKDSGVSQNTTSIFLESAYFNAVSVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI-- 404 K I TD+ +RFERG+D LK LI + GG SDI I P+KI Sbjct: 361 KRHTISTDASFRFERGIDPSITEYALKRAAILICEVSGGQITSDI-----IDIYPKKIED 415 Query: 405 --VFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS--VPSWRQDVEEKADL 459 V +N E V ++ G ++P + +IL L V K + +P++R DV + D+ Sbjct: 416 HQVMLNIEKVNKIIGQEIPDDTIKKILASLDIKV-NSISKVALGLVIPAYRVDVTREIDV 474 Query: 460 VEEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 +EEILR+YG + I ++ L T R + + +L + E++ S + Sbjct: 475 IEEILRVYGYNNINFTQKLNATTSHSSRTEDYKIQNI--IANLLVANGFNEMMANSLTTP 532 Query: 519 EQSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + L + I+N +S D+S MR SLL L+A N++R +D +FE Y Sbjct: 533 TYTSLSDSLNESNNVLIINSLSNDLSAMRQSLLFSGLEAISFNINRKNSDLRLFEFGKTY 592 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---- 632 K ++ + +G S+ + D F K L+++E Sbjct: 593 -------HKLLSGNQENSHLTLFMTGNKISESWTNPQKASDFFLFKGYVLAILERLGLSK 645 Query: 633 ---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 L++ F G Y G S +++ FG +IL F + + + Sbjct: 646 IISSPLNTDVFAEGMV--YEMGNSTLVE---------FGTVKKSILKHFDIKQEVFFADF 694 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVT 748 +SI K+ + K +S V+RDLA ++D I L +I K ++ L+ ++ Sbjct: 695 NWNSII---KQISNNIKFTEISKYPEVRRDLALLIDNEIQFVQLFDIAKKTEKNLLKNIN 751 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK+L EGKKS AI ++Q T D I +M ++ +N + A LR Sbjct: 752 LFDVYEGKNLPEGKKSYAISFILQDNAKTLTDAQIDKVMSKLTQNFETELGATLR 806 >gi|317057017|ref|YP_004105484.1| phenylalanyl-tRNA synthetase subunit beta [Ruminococcus albus 7] gi|315449286|gb|ADU22850.1| phenylalanyl-tRNA synthetase, beta subunit [Ruminococcus albus 7] Length = 803 Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 242/827 (29%), Positives = 398/827 (48%), Gaps = 55/827 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M ++ WL D++D D+ ++ +T G +VE + + L + +V + +P+ D Sbjct: 1 MDLSMRWLADYVDCDMPIKDFVSGITLSGSKVECYNEEGDYLENVVVGQVKDIVPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTG 116 I ++D G+ +Q+V GA NV+ A S + V + K +RG S G Sbjct: 61 HMFICQLDVGEGALVQIVTGAQNVKKDDFVPVAKHKSTVLHEGKTVKITKGKLRGEASNG 120 Query: 117 MMCSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 M+CS EL LS +D I+ D VG + + + +D ++ +T NR DC Sbjct: 121 MLCSLGELGLSVHDFPYAIEDGIFILGDDCDKTVGKDIREAIGFNDTTVEFEITSNRPDC 180 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + V G+A + AA GK E+ + P I +K + ++ LCK + VK V Sbjct: 181 MSVIGLARE-TAATFGK--ELKVKAPEFKGVDGDINEMLKVKIHNTDLCKRYIGAIVKNV 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSG 284 + +P WMR+RL+A G+R I+ VDITNYV L+ G P H FD + + VR A G Sbjct: 238 KIGPSPRWMRERLRASGVRPINNFVDITNYVMLEYGRPMHAFDLRYVEGAEINVRNAKQG 297 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EKI LD E +LS + +VIA + ++AG++GG+++G D+TT V+ E A +D +IA Sbjct: 298 EKITTLDGIERELSEEMLVIADAKKPVAVAGVMGGEYSGIMDDTTTVVFESACFDGASIA 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-PRK 403 + K L + TD+ R+++G+D L L+ L G I N + P Sbjct: 358 TTAKKLRMRTDASSRYDKGLDPHECYEALMRACQLVEELGAGEVVKTVIDENYQNETPLN 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + F + G D+P + + ILE+L F+V V P +R D+ KAD+ EE+ Sbjct: 418 VEFSADWINNFLGTDIPEAEMISILEKLEFTV----KDGRVYAPWFRVDIGCKADIAEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QS 521 RIYG + I P + + + +Q+ R VK + S + E+ +SFIS + Sbjct: 474 ARIYGYNSI---PDTIIRGVANAQRTPKQNYERKVKAAMLSMGLNEIETFSFISPKYFDK 530 Query: 522 VLFGGGQR---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + + + I+NP+ D S MRT+++P +L+ RN + +FE+ + Y Sbjct: 531 IALPADSKLRNTVTIMNPLGEDTSVMRTTIIPSVLEVVARNYSYRNPECYVFEMGNEY-- 588 Query: 579 DTP-EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 P EG+ +R G + +DK+ + + D +A+ E Sbjct: 589 -IPVEGEVLPNEPVRLGFGFYD-----TTDKA-DFYTLKGMADGLLNAVGAEEAEYERPG 641 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 E S +HPGR +IK + V G GE HP +++ +G+ Y+ I I Sbjct: 642 DDCEFAEVSAFHPGRCAVIKVDGKQV-GIIGELHPKVMENYGIEA-----RTYIGKINIP 695 Query: 698 Q--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQ 754 + + TK L RDL+ + D+ +PA L IK V +++ VT+FDV++ Sbjct: 696 ELMELSCDTKTYKPLPKFPASTRDLSVVCDEELPAAELEKAIKKAVGGILESVTLFDVYR 755 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 G+ + GKKSV+ + ++ L+ T DD D+ +E +K+ A+ Sbjct: 756 GEQIEAGKKSVSYSISMRSLEGTLTDDQ----ADKAMEKAIKELAAI 798 >gi|312870548|ref|ZP_07730666.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] gi|311093945|gb|EFQ52271.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus oris PB013-T2-3] Length = 805 Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 233/832 (28%), Positives = 416/832 (50%), Gaps = 56/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WLK++LD DV ++ + + +++ V + + L + V++ E +PD D Sbjct: 1 MKVSYQWLKEYLDIDVEPHELAEKIARTSVDINDVYSLSDGLKKIVVGDVITCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + IQ+VCGAPNV G + A G+ I +N+ + KIRG++S GM+ Sbjct: 61 HLHVCQVDVGEDEPIQIVCGAPNVVAGEKVIVALHGARI-GDNVKIKRGKIRGVQSNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +EL SD A I LP DA G + YL + D IID +TPNR D + + Sbjct: 120 CALQELGFSDKIAPKDYDDGIYLLPADAKPGESVFPYLGMDDVIIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A GL KE+ + ++++ + + D+ L + + V GV + Sbjct: 180 GNVNDIAAFYGLKPHFKEVAVKEE-ANQATSDRLSAQVTDTKLAPTYKLRVVDGVTVADS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ +L G+R ++ +VD+TNYV L G P H +D ++ VR A + EK Sbjct: 239 PLWLQIKLWNSGVRPVNNVVDVTNYVLLKYGQPLHSYDYDQLPGHDFGVRHAQADEKFTT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L ++V+ + G+ ++AG +GG+ +T V +E A++DPI + + + Sbjct: 299 LDGDEQTLKESDIVVTAAGQPVALAGTMGGQGTAVSASTKTVALEAAIFDPIMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMN 408 L + ++S RFERG++ + L LI L GG A+ I A T + ++I Sbjct: 359 LDLHSESSMRFERGINPATVETALDEAAELISELAGGQATTGIVTASEKTAEDKQITLSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +++ + G ++ ++ I RL F V + + D+ V+VP+ R D+ ADL EEI RIY Sbjct: 419 AKINHVLGTELSQDEVSDIFNRLAFPVDVVDDDQLMVTVPARRWDIFVAADLYEEIARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + + LP+ + L+ +Q R + + + + +++S +++++ F Sbjct: 479 GYDTLPAT-LPV-MTRNHGGLTPRQKFLRASRHEMEGMGLTQAISYSLTTEDKAKQF--- 533 Query: 528 QRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 Q E +++ P+S+D R SL+ GLL NV R + + A++E V+ + Sbjct: 534 QIEPLAEPMKLDFPMSSDHVATRMSLISGLLIDVAYNVARNVNNVALYEAGRVFLPKGGE 593 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV------ 633 PE Q+++A I +G+L ++ ++ + VD F K ++E ++ Sbjct: 594 RPEEQEHLAGAI---------TGQLLANSWHKQDQPVDFFQIKG----IVERYLHNLGLA 640 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + R P HPGR+ I ++V G+ G+ HP + + FE+ L++ Sbjct: 641 GTITYRATQDRPEM-HPGRTADIYVDDQLV-GFVGQVHPRTAKDYKVPATYV-FELNLEA 697 Query: 694 IPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 + + K + H S +P + RD+A +VD+++ +V +I K + V +FD Sbjct: 698 LLAADKVANE----YHPISKYPAITRDIALLVDRNVTNADVVAVIEKRAGAFLKKVHLFD 753 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ G L +GKKS+A + Q DT +D + ++ + + + A +R Sbjct: 754 VYSGLHLPKGKKSLAYTLTYQDDHDTLTEDQVNKAFAKVTQALEDELAAEIR 805 >gi|19552607|ref|NP_600609.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|62390275|ref|YP_225677.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glutamicum ATCC 13032] gi|30316241|sp|Q8NQN6|SYFB_CORGL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|41325612|emb|CAF21401.1| PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN [Corynebacterium glutamicum ATCC 13032] Length = 835 Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 241/818 (29%), Positives = 382/818 (46%), Gaps = 81/818 (9%) Query: 39 EALSPFTIVKVLSVE-----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAP 92 E P +V ++E + P C + D E+Q +VCGA N + G V + Sbjct: 45 ETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANGTGELQSIVCGARNFKEGDTVVVSL 104 Query: 93 PGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDYL 150 PG+ +P + ++ R+ G S GM+CS EL L+D +S I P G L Sbjct: 105 PGAVLP-GDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDARQAL 163 Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE---------INISCPLSSESIP 201 L D + DV++TP+R + RG+ +L +A + I + P S+ Sbjct: 164 GLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPAVAGIEVKVPAVEGSL- 222 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 I +L + + F + V G+ +P WM++ L G R ++A D+TNYV L Sbjct: 223 --INVELREETKAIRFGLRKVSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLL 280 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 G P H FDA++++ L VR A +GEK LD+ + L+ ++VVI D IQS+AG++GG Sbjct: 281 GQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEEDVVITDDNGIQSLAGVMGGL 340 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + D TTDV E A WD I +AR+ + + +++ RFERGVD + L +L+ Sbjct: 341 TSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL 400 Query: 381 LSLCGGT--ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 + + GGT A + +P I + L+G+D E + LE +G +V Sbjct: 401 VEIAGGTVDAGRTLVGDVPAMQP--ITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVS 458 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 D EV+ P+WR D+ ADLVEE+LR+ G++ I P + R L+ Q R R V Sbjct: 459 GDTLEVTPPTWRGDLTMSADLVEEVLRLEGLEAI---PTIIPTAPAGRGLTDAQKRRRAV 515 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLL 553 LA E++ F+ E ++G ++ + +LNP+ A+ + + TSLLP +L Sbjct: 516 GHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLEAERNVLSTSLLPSML 575 Query: 554 KATGRNVDRAIADFAIFEVSHV-YEN-----------------------DTPEGQKYMAA 589 A RNV R DF++F + V +E+ D+ Q A Sbjct: 576 DAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVA 635 Query: 590 GIRKGS---SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + G+ G G GR ++ F D ++ + L + + A Sbjct: 636 TVGTGNIEFEGPWGKGRAYT--------FADAIESARAVARAAGVTLELAN----ADALP 683 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 W HPGR + V GY GE HP IL+ GL C E+ L ++P+ + Sbjct: 684 W-HPGRCAALLIDGTPV-GYAGELHPQILEKAGLPARTCAMELDLSALPLVENLPAPV-- 739 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LSS + +D+A +VD+ IPA + +++ LI+ V +FDV++ + LGE KKS+ Sbjct: 740 ---LSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGENKKSL 796 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A + + T D++ + E +K NA +R Sbjct: 797 AFSLRFRATDRTLTDEEANEARLQAAELAKEKFNAEMR 834 >gi|163781616|ref|ZP_02176616.1| phenylalanyl-tRNA synthetase beta subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159882836|gb|EDP76340.1| phenylalanyl-tRNA synthetase beta subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 772 Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 245/810 (30%), Positives = 394/810 (48%), Gaps = 45/810 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL- 58 M+ SWL +D +++ E++ + L+ +E E L KVL V +P Sbjct: 1 MRVPFSWLSLFVDLGELTAEEVAERLSLQSVEAEVSVFGTELDGVVFGKVLVVRSHPKKK 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +L ++ + + + +V V G + V A P S + + V R+ GI S GM+ Sbjct: 61 ELNVLEVEVVRGKSVTIVTADRGVSKGEVVVVALPNSKV--GDRCVTKREFDGIVSEGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S +E+ L + S ++ D G + L + +I++ +TPNR D + VRG+A ++ Sbjct: 119 LSAQEIGLEEHSEGVLRFHEDITPGTDAGELLGFGEKLIELDITPNRGDVLSVRGLAREI 178 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A + +E + E+ L I + D C+ + ++GV + +R+RL Sbjct: 179 GAIFGLERREPEVRS--LEETGDLSISIEDGD---CRRYRGVVIEGVSVKPSSLEVRKRL 233 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 GLR I+ +VDITNYV L G P H FD R+ + VR A GE+I LD +E +L Sbjct: 234 WQSGLRPINNVVDITNYVLLQEGQPLHAFDLDRLEGGIVVRSAREGERIRTLDGEERELD 293 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 PD +VIA + ++AG+IGG G +NT +VL+E A ++P + RS K LG+ T+S Y Sbjct: 294 PDVLVIADREKPVAVAGVIGGLDTGVTENTRNVLLEAAYFEPARVRRSSKKLGVQTESSY 353 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFER VD++ + V IL GG+ + Y+P+K+ + R +G Sbjct: 354 RFERNVDVERVDRAEDLAVQYILDAAGGSVRAVRDLYPKKYEPKKVFLSMGKFMRYAGES 413 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPL 477 E++ IL L + EV VPS R D+ D+VEE++R+ G D SE L Sbjct: 414 YKNEEASTILSALEIPHEIKRCGIEVLVPSHRSFDISRDVDIVEELMRVKGYDHYTSEAL 473 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 L V L + +K L + + EV+N S+ +E L G + ++E+LNP+ Sbjct: 474 KLPVVG-----RLWRDELLELKEYLRDKGITEVINISYEEEELYELLGLEKPQVEVLNPL 528 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 MR+SLLP LL+ N + D AIFE+ V+ D E + G Sbjct: 529 VPTQRFMRSSLLPSLLRTAKFNENHYNYDMAIFELGKVFFKDGEENR-----------LG 577 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--ESGAPSWYHPG-RSG 654 I G L EE + L V++ + L + F ES S+ HP +S Sbjct: 578 ILVKGVLDPLSVEEWTPY--------RLLGVVQGLLELRGVNFELESSNKSFLHPHVQSR 629 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 I+ EI G+ G HP++ F E+ +D P+ ++ + V S Sbjct: 630 ILAEGEEI--GFIGRLHPSMSQRFEFKGEPILCELKVD--PLLERTLPHYRAV---SKFP 682 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PV RDLA IVD+H+ L+N IK+ + +++D VFDV+ G+ +GEGKKSV +++ + Sbjct: 683 PVIRDLALIVDKHLSVSKLLNEIKSQLTEMVEDAMVFDVYAGEKVGEGKKSVGVRISFRS 742 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L+ + +++ L+D +V + +K +R Sbjct: 743 LRGSLSGEEVNALVDELVRRLREKLGVEMR 772 >gi|148242322|ref|YP_001227479.1| phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] gi|147850632|emb|CAK28126.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. RCC307] Length = 814 Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 244/842 (28%), Positives = 423/842 (50%), Gaps = 68/842 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPD-- 57 M+ +L WL+D + ++ + + L+ G EVE+ ++ A + +V +VLS +PD Sbjct: 1 MRVSLQWLRDLVPFRSDVDSLAEQLSMAGFEVEEQEDLAARAAGVVVGQVLSKTPHPDAN 60 Query: 58 -LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L+ + I G + +Q+VCGA NVR G+ A GS +P ++ + K+RG++S G Sbjct: 61 KLNVCSVSIGGGS-EPLQIVCGAANVREGMAVAVATVGSHLPAVDLTIKPAKLRGVDSCG 119 Query: 117 MMCSEKELMLSDDSASIMELPIDA--------PVGGRLSDYLELSDPIIDVSLTPNRSDC 168 M+CS EL L +S +++L + A +G + L L+D I+++++T NR D Sbjct: 120 MLCSLSELGLETNSEGLVDLEVVAGEQGSPLPQLGEPVGPLLGLTDHILELAITANRPDG 179 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGV 225 + + GIA ++ A L+++++ P S+E ++ LE D + L F++ ++G+ Sbjct: 180 MSMLGIAREVAA-----LEDLSVQEPPSAELEPAVQLETAPFGDHALL---FSLTALEGI 231 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV----LTVRRA 281 N +P W+RQRL+A G RSI+ +VDITN V L+ G P H +D R++D+ +R A Sbjct: 232 SNGPSPKWLRQRLEAAGQRSINTVVDITNLVMLETGQPLHAYDRDRLADLGPEGFGLRAA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 S E I LD Q L DN++++ G+ ++AG++GG+ + ++T + +E A++ Sbjct: 292 SSDESIELLDGQTLKLRADNLLVSHGGQAVALAGVMGGQSSAVTESTQRIWLEAAVFPQN 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 + RS + G+ T+S RFERGV + V+L+ LC + A + Sbjct: 352 LVRRSSRAAGLRTESSARFERGVPQALTLEASNRAVALLQELCQAKVTGRWQASPVASAT 411 Query: 402 RKIVFMNSEVKRLSGIDVP------IEDSL--RILERLGFSVIGEYD------KFEVSVP 447 +V + RL G P IEDS +LERLG S+ +D + V VP Sbjct: 412 EPLVLRREALDRLLG---PLGSGEWIEDSKVGALLERLGCSLQSHHDDDDQISHWSVQVP 468 Query: 448 SWRQ-DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 RQ D++ + DL+EEI R+ G D S P P+ + L+ +Q R ++ L + Sbjct: 469 PSRQLDLQREVDLIEEIARLVGYDNFGSHLPDPV----EPGGLTAEQELLRRLRSNLRAA 524 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + E+ + S ++ E+ ++ I NP+ D +RT+++P LL+A RN+ + A Sbjct: 525 GLQEISHLSLVATEEP----SNPAQVAISNPLLTDYGCLRTTVVPALLEAAARNLQASQA 580 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA-D 624 F FE+ V+ D G + G E LWS + + + Sbjct: 581 GFWGFEIGKVFARD---GDVFSEEERLCGVLAGERRQGLWSTSGQPSP--LSYHQGRGLL 635 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 AL++ + +SL R E HPGRS + +++ G FGE HP + + L + Sbjct: 636 ALAMAQLGLSLQDRRLEDD--ERLHPGRSATLVLEGKVI-GVFGELHPRLAEQQDLPSGT 692 Query: 685 CGFEVYLDSIPISQKKRTK--TKKVVHLSSLHPVKRDLAFIV-DQHIPAGTLVNIIKNVD 741 F++ L + ++ RT +++ +RDLAF+V D A L I K Sbjct: 693 LIFDLALQPV-LTAASRTNRYCPAFKSFATVPASERDLAFVVEDTQDVASVLQTIRKAGG 751 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +L++ V + D + G + EG S+A+++ + K T RD+ + L++++ +++ K A Sbjct: 752 QLLEHVDLLDRYSGSPIPEGSCSLAVRLRFRDPKATLRDEQVDPLLNKVRQSLEKSFKAE 811 Query: 802 LR 803 LR Sbjct: 812 LR 813 >gi|21324158|dbj|BAB98783.1| Phenylalanyl-tRNA synthetase beta subunit [Corynebacterium glutamicum ATCC 13032] Length = 828 Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 241/818 (29%), Positives = 382/818 (46%), Gaps = 81/818 (9%) Query: 39 EALSPFTIVKVLSVE-----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAP 92 E P +V ++E + P C + D E+Q +VCGA N + G V + Sbjct: 38 ETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANGTGELQSIVCGARNFKEGDTVVVSL 97 Query: 93 PGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDYL 150 PG+ +P + ++ R+ G S GM+CS EL L+D +S I P G L Sbjct: 98 PGAVLP-GDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDARQAL 156 Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE---------INISCPLSSESIP 201 L D + DV++TP+R + RG+ +L +A + I + P S+ Sbjct: 157 GLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPAVAGIEVKVPAVEGSL- 215 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 I +L + + F + V G+ +P WM++ L G R ++A D+TNYV L Sbjct: 216 --INVELREETKAIRFGLRKVSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLL 273 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 G P H FDA++++ L VR A +GEK LD+ + L+ ++VVI D IQS+AG++GG Sbjct: 274 GQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEEDVVITDDNGIQSLAGVMGGL 333 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + D TTDV E A WD I +AR+ + + +++ RFERGVD + L +L+ Sbjct: 334 TSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL 393 Query: 381 LSLCGGT--ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 + + GGT A + +P I + L+G+D E + LE +G +V Sbjct: 394 VEIAGGTVDAGRTLVGDVPAMQP--ITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVS 451 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 D EV+ P+WR D+ ADLVEE+LR+ G++ I P + R L+ Q R R V Sbjct: 452 GDTLEVTPPTWRGDLTMSADLVEEVLRLEGLEAI---PTIIPTAPAGRGLTDAQKRRRAV 508 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLL 553 LA E++ F+ E ++G ++ + +LNP+ A+ + + TSLLP +L Sbjct: 509 GHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLEAERNVLSTSLLPSML 568 Query: 554 KATGRNVDRAIADFAIFEVSHV-YEN-----------------------DTPEGQKYMAA 589 A RNV R DF++F + V +E+ D+ Q A Sbjct: 569 DAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVA 628 Query: 590 GIRKGS---SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 + G+ G G GR ++ F D ++ + L + + A Sbjct: 629 TVGTGNIEFEGPWGKGRAYT--------FADAIESARAVARAAGVTLELAN----ADALP 676 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 W HPGR + V GY GE HP IL+ GL C E+ L ++P+ + Sbjct: 677 W-HPGRCAALLIDGTPV-GYAGELHPQILEKAGLPARTCAMELDLSALPLVENLPAPV-- 732 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LSS + +D+A +VD+ IPA + +++ LI+ V +FDV++ + LGE KKS+ Sbjct: 733 ---LSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGENKKSL 789 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A + + T D++ + E +K NA +R Sbjct: 790 AFSLRFRATDRTLTDEEANEARLQAAELAKEKFNAEMR 827 >gi|332878493|ref|ZP_08446214.1| phenylalanine--tRNA ligase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332683588|gb|EGJ56464.1| phenylalanine--tRNA ligase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 835 Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 236/854 (27%), Positives = 420/854 (49%), Gaps = 70/854 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK+++D +++ +++ D LTS GLEV V+ + L I +VL+ +P Sbjct: 1 MNISYNWLKEYVDFELTAQEVADALTSEGLEVGCVEEVQPVKGGLQGLVIGEVLTCVPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIE 113 + D + ++ G+ + +Q+VCGAPNV G V A G + + + ++K +RG+E Sbjct: 61 NSDHMHVCTVNLGEGEPVQIVCGAPNVAAGQKVVVATLGCKLYDGDECFTIKKSKLRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + D I+ LP A G ++Y L SD +I+V +TPNR+D Sbjct: 121 SHGMICAEDEIGIGTDHNGIIVLPETAVPGTPAAEYYNLKSDYLIEVDITPNRADACSHY 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A + + + P +S L+I ++ ++ C +A ++ Sbjct: 181 GVARDLYAWLVQNGHKTALHRPSCDGFKVDSHELDIDIEVQNAEACPRYAAVTLRNCEVK 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L+ +GLR I+ +VD+TNY+ G P H FDA I + V+ G Sbjct: 241 ESPEWLQDKLRTIGLRPINNIVDVTNYIMFAYGQPLHCFDADMIKGGKVVVKTMPEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E+ LS ++ I + IAG+ GGK +G + T +VL+E A ++P I +S Sbjct: 301 VTLDGEEHKLSDRDLAICNVEEPMCIAGVFGGKGSGTYETTRNVLLESAYFNPTWIRKSA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK---PRKI 404 + G+ TD+ +RFERG+D G+I LK L L GG +I + Y P + Sbjct: 361 RRHGLSTDASFRFERGIDPNGVIYALKQAAMLCKELAGG---EIAMEIKDVYPNPLPDFV 417 Query: 405 VFMNSEVKR-LSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEE 462 V +N E L G ++ + I+ L ++ E + ++ VP++R DV+ D+VE+ Sbjct: 418 VDLNYEYAYGLMGKNIGADTVKSIVTSLEMKILEETAEGLKLQVPAYRVDVQRPCDVVED 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 ILR+YG + ++ +P + V N+ ++ ++ ++A + E++N S Sbjct: 478 ILRVYGYNNVE---IP-SAVRSTLNVKGDDDKSHKLQNLVAEQLVGCGFNEILNNSL--- 530 Query: 519 EQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +++ + G ++++NP+S+D++ MR +LL G L+ N +R AD FE Sbjct: 531 QRAAYYDGMESYPASHLVKLMNPLSSDLNAMRQTLLFGGLECIAHNANRKNADLKFFEFG 590 Query: 574 HVY----ENDTPE-------------GQKYMAAGIRKGSSGIEGSGRL----WSDKSEER 612 + Y EN P+ Q + A G+ +G+ W+ E+ Sbjct: 591 NCYYFREENKCPDIVSGVSSSRDPEVIQHVLDAYSEDYHLGLWVTGKRVSGSWAHPDEDS 650 Query: 613 CRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI-IKTSAEIVLGYFGEF 670 ++ KA L+++ V+ +L F APS GI I+ VL G Sbjct: 651 ----SFYELKAYVLNILTRLGVNFGALVF---APSRNDIYSKGIEIQNRGGKVLAMLGIV 703 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 I + + + + L+ + + R + V RDLA ++D+ + Sbjct: 704 SRKIQKMMDVDHEV--YYADLNWKLLMKAIRNNKISYTEIGKFPAVSRDLALLLDKGVEF 761 Query: 731 GTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + + + + +L+ +VT+FDV++GK+L GKKS A+ ++Q T D I +M++ Sbjct: 762 AEIEKVAYSTEKKLLKEVTLFDVYEGKNLEAGKKSYAVNFVLQDETKTLNDKQIDAIMNK 821 Query: 790 IVENVVKKTNAVLR 803 ++ N+ K A LR Sbjct: 822 LIANLQAKLGAKLR 835 >gi|227875735|ref|ZP_03993863.1| phenylalanine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269976716|ref|ZP_06183692.1| phenylalanyl-tRNA synthetase, beta subunit [Mobiluncus mulieris 28-1] gi|227843677|gb|EEJ53858.1| phenylalanine--tRNA ligase [Mobiluncus mulieris ATCC 35243] gi|269935081|gb|EEZ91639.1| phenylalanyl-tRNA synthetase, beta subunit [Mobiluncus mulieris 28-1] Length = 878 Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 268/895 (29%), Positives = 399/895 (44%), Gaps = 108/895 (12%) Query: 1 MKF-TLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WLK + L ++ L +GLE E + P KVL +E Sbjct: 1 MAFVSIEWLKRWCEVPAGLTAAQLAKDLVKVGLEEETIHTSGVTGPLVCGKVLRMEPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGAEFNDAPGAGKEPSDVASRSIICGAHNFKEGDHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASI-----------MELPIDAPVGGRLSDY 149 + + RK G S GM+CS +EL L +D I ME+P PVG L Sbjct: 120 DFRIATRKTYGHISDGMICSARELGLGEDYNGIIVLEEYLGERGMEVP---PVGTDLLGM 176 Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEI----NISCPLS---SESIPL 202 L L+ ++++++TP+R C +RG+ + + + N+ PL+ + P+ Sbjct: 177 LGLNHELLEINITPDRGYCFSMRGVGREYSHSTGAAFTDWGLAENLKNPLAEANNSGFPV 236 Query: 203 EIKFDLDDSSL-----CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYV 256 EI DD+ + C F V+G P WM RL++ G+RSIS VD+TNYV Sbjct: 237 EIT---DDAPIRGNVGCDRFVTRMVRGFNPKAKTPEWMVTRLESAGMRSISLAVDVTNYV 293 Query: 257 SLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQ 311 LD G P H +D ++ + VRRA GEK LD E L P+++++ R+ Sbjct: 294 MLDLGQPMHAYDLDKVKGSIVVRRARDGEKHTTLDEVERSLYPEDLLVTDCKGGHAARVL 353 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 IAG++GG TT+VL+E A +D +++AR+ + I ++S RFERG D Q + P Sbjct: 354 GIAGVMGGAETEITAATTNVLLEAAHFDAVSVARAARRHKIPSESSRRFERGTDPQ-LPP 412 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILER 430 V + +L GG D I P V + + RL G++ E +L+ Sbjct: 413 VAAQYAAELLVEYGGGVIDEGITDVNHSAPMPSVTLGFDAASRLIGVEYSAERCEELLKA 472 Query: 431 LGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRN 487 +G + F V+ PSWR D+ A LVEEI R+ G DQI S P+ + Sbjct: 473 IGCQTCRDDSAKAFTVTPPSWRPDLVGAAHLVEEIARLDGFDQIPSLVPVGPAAI----G 528 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQR-ELEILNPISADMSN 543 L R + LA + EV+ + F+ E Q +R + + NP++ D Sbjct: 529 LPAVLCTRREISDTLAEAGLTEVMTYPFLGDEHDRQGFPVDDPRRVTVRLANPLADDAPA 588 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMAA 589 +RTS+L LL RNV R AI+E+ V + E + + A Sbjct: 589 LRTSVLDTLLNTASRNVARGNQRVAIYELDQVALAHGVVPAAIPGVEHRPSDEEMQALRA 648 Query: 590 GIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVI----------EPFVSL-- 635 G+ K + +G + R D DA A A+ V P V Sbjct: 649 GMPKQPWRVAAVLAGNATEAYPGQPARAWDWADAIALAMRVATSQGLTVRSEAPNVKCGG 708 Query: 636 -DSLRFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEVYL 691 D +S AP +HPGR I+ AE VLGY GE HP + FGL C FE+ L Sbjct: 709 NDGKATQSVAP--FHPGRVAQIRVGAETGGKVLGYAGELHPQVCREFGLPERSCAFEIDL 766 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTV 749 D+I +K R K + S PV K D AF+VD + A + N I K ++ V + Sbjct: 767 DAI---EKARPKGAFQLRAVSTFPVAKEDFAFVVDTDVAALKVQNAIAKAAGDAMESVHL 823 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD F G+ LG+GKKS+A + ++ T DIR + R++ V K A LR+ Sbjct: 824 FDSFTGEQLGQGKKSLAFALRLRAADHTLNPQDIREIRQRVIAKVQKTCRATLRA 878 >gi|326336173|ref|ZP_08202345.1| phenylalanyl-tRNA synthetase beta subunit [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691682|gb|EGD33649.1| phenylalanyl-tRNA synthetase beta subunit [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 808 Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 248/836 (29%), Positives = 420/836 (50%), Gaps = 60/836 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +W+KD L D+ EK+ + LT +GLEVE + E+ L+ + +VL ++P Sbjct: 1 MKISYNWIKDFLKIDLPKEKVGEILTDLGLEVEGITTYESIKGGLAGVVVGEVLECVKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI---VNVRKIRGI 112 + D ++ ++D G+ + +VCGAPNV G A G+ + + + + KIRG Sbjct: 61 NADKLSLTKVDLGEGGVVPIVCGAPNVAQGQKVAVATIGTTLYDKEGVPFKIKKGKIRGK 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L D+ I+ L P G + + SD I ++ LTPNR+D + Sbjct: 121 ESFGMICAEDELGLGDNHEGIIVLENTLPNGKPCGEVFNVVSDVIFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIP----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A L + I P ++ L+I +D+ L + + ++ Sbjct: 181 LGVARDLRAGLLQQGINKEIITPSVTDFFVNNRLLKIDVLVDNKELAPRYCGVSISNIKV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RL+A+G+ + +VD TNYV D G P HVFDA IS + VR A GE+ Sbjct: 241 APSPAWLQNRLRAIGIIPKNNVVDATNYVLHDLGQPLHVFDALHISGKKIIVRNATEGER 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD + LS +++VI + +AG++GG ++G +TT + +E A ++PI I ++ Sbjct: 301 IQTLDGVDRSLSAEDLVICDMDKPLCLAGVLGGNNSGVSQDTTHIFLESAYFNPIAIRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKI- 404 K GI TD+ +RFERG+++ L LI L GG +SD+ I + P+KI Sbjct: 361 AKRYGISTDASFRFERGINVDTCKYALLRAAILIKKLAGGEISSDV-----IDFYPKKIE 415 Query: 405 ---VFMNSE-VKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKAD 458 VF+ E + L G +P ++ IL L + I E ++VPS+R DV+ D Sbjct: 416 DFKVFLTYEKIDNLIGQVIPRDEIKSILHSLDIQINSITEIG-MGLTVPSYRVDVQRDVD 474 Query: 459 LVEEILRIYGVDQIK-SEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 ++EEILR+YG ++I+ S + T + + ++Q + LA + E++N S Sbjct: 475 VIEEILRVYGYNKIEYSSKVSATMAHSSKYEDTNIQN----IIGAQLAGQGFFEIMNNSL 530 Query: 516 ISKEQSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + + + L + + ILNP+S D++ MR ++L L+ N +R +D A+FE Sbjct: 531 TTAKYNELSTDIDPNQAVAILNPLSQDLAVMRQNMLFSGLETIAYNNNRKRSDLALFEFG 590 Query: 574 HVYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 Y D E K++ + +G ++ + + + + KA + ++E Sbjct: 591 KTYHRIGDNFEEPKHLTLFL---------TGNVYPEMWNAPTQRTNFYYLKAYIMRILER 641 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 ++ +P+ + GI + +I L GE +IL++F + EV+ Sbjct: 642 L----GIKEVVESPTDESVFQEGIQLSLGKIHLASLGEVKRSILNYFDIKQ-----EVFF 692 Query: 692 DSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVT 748 I + +KKV + + V+RDLA ++D+++ L I K L+ V+ Sbjct: 693 ADISWDKVLENLSKKVFYTEIPKYPEVRRDLALLLDENVLFEQLYQIAFKTEKELLKKVS 752 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FDV+QG L +GKKS A+ ++Q T D I +M+ +++ K+ A LRS Sbjct: 753 LFDVYQGDKLPKGKKSYALSFVLQDKNKTLTDKQIDKVMNVLLDTFSKEVGAELRS 808 >gi|311742384|ref|ZP_07716193.1| phenylalanyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM 15272] gi|311314012|gb|EFQ83920.1| phenylalanyl-tRNA synthetase beta subunit [Aeromicrobium marinum DSM 15272] Length = 827 Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 246/858 (28%), Positives = 406/858 (47%), Gaps = 85/858 (9%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD- 57 M+ + WL+ +D + E+I D LT+ L++E++ P + +VL + P Sbjct: 1 MRVPVEWLRSMVDLPAGTTTEQIADRLTAFDLKLEEIIGAAVTGPLVVGRVLELTPEPQK 60 Query: 58 ---------LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 +D D G + +VCGA N VG L V A PG+ +P + RK Sbjct: 61 NGKTINWCRVDVGPGGPDDGSAEGRGIVCGAHNFGVGDLVVVALPGAVLP-GGFAIAARK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL L D I+ LP DA G + LEL ++D+ + P+R+ Sbjct: 120 TYGHVSDGMICSAAELGLPADGEGIIVLPGDAAAPGDDAVSLLELGGEVLDLEVNPDRAY 179 Query: 168 CIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV- 225 + +RG+A D +A + + + P + E+ P+E++ D+ C F V G Sbjct: 180 ALSLRGVARDTALAFDVPFVDPVPDLRPATGEAHPVEVR----DADACPVFTARVVTGFD 235 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 P WM +R++ G+RSIS VD++NYV L+ G P+H +D ++++ L RRA GE Sbjct: 236 PTRPTPRWMARRVEQAGMRSISLAVDVSNYVMLELGQPNHAYDLAKVTGPLVARRARPGE 295 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD+ + L PD++VIA D IAG++G D +TD+++E A +DP IAR Sbjct: 296 HVTTLDDVDRALDPDDLVIADDDGAVGIAGVMGAARVEIDPTSTDIVIEAAHFDPAVIAR 355 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + + +++ R ERGVD + + L+ L G + PR+ V Sbjct: 356 SARRHKLGSEASRRNERGVDPALSAAASQRVADLLAELG-GGVVGPGLTVVGEPAPRRAV 414 Query: 406 FMNSEVK-RLSGIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEKADLVEE 462 ++ ++ R+SG VPI + + +D + V+ P+WR D+ + DLVE+ Sbjct: 415 TIDDDLPARISG--VPISAEVAVAALAAGGGYVSHDAGRITVTPPTWRFDLTDPHDLVED 472 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +LR+ G DQ+ S L R L+ Q R R LA+ ++EV + F Sbjct: 473 VLRVVGYDQVPSV---LPTAPAGRGLTRSQQLRRRASRALATAGLVEVKTFPFAGPADLD 529 Query: 523 LFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 G +R++ + NP+SA+ + T+LL GLL+A NV R AD +I E + V+ Sbjct: 530 RLGLPEDDPRRRQVLLANPLSAEEPGLTTTLLTGLLRAAALNVGRGHADVSIVETARVFL 589 Query: 577 --------------ENDTPEGQKYMAAGI-------------RKGSSGIEGSGRL--WSD 607 TP + + A + ++ SG G GR W+D Sbjct: 590 PAETLVPAPVYGVDSRPTPAEVELLDAALPDQPHHVGLVMLGQRVGSGWAGPGRAAGWAD 649 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 R A++L V L + + +HPGR + V+G+ Sbjct: 650 AISVARRV-------AESLHV--------ELEVAATEHAPWHPGRCASLSVDG-TVIGHA 693 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQ 726 GE HP ++ GLS + E+ LD++ + + S +PV K DLAF+V++ Sbjct: 694 GELHPQVVAAHGLSGRVAAAELDLDALVAAAPALGPRPEF----STYPVAKEDLAFVVER 749 Query: 727 HIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 PAG ++++++ +I+ V +FDV+ G + +G S+A + ++ T D++IR + Sbjct: 750 GTPAGRVLSVLRAAHPVIESVRLFDVYDGDQVADGSVSLAFSLRLRAPDRTLGDEEIRTV 809 Query: 787 MDRIVENVVKKTNAVLRS 804 D V+ V ++ A LR+ Sbjct: 810 RDAAVDAVTREFGATLRA 827 >gi|269798128|ref|YP_003312028.1| phenylalanyl-tRNA synthetase subunit beta [Veillonella parvula DSM 2008] gi|269094757|gb|ACZ24748.1| phenylalanyl-tRNA synthetase, beta subunit [Veillonella parvula DSM 2008] Length = 814 Score = 306 bits (785), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 232/820 (28%), Positives = 395/820 (48%), Gaps = 62/820 (7%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKV---DNREALSPFTIVKVLSVERN 55 MK +L W+ +++ D+ +++ D LT G+ VE V DN + K++ + ++ Sbjct: 1 MKASLQWMNEYVPVDMKRPAQELADELTQAGIPVEDVIAMDN--GIKKIYTGKIVEITKH 58 Query: 56 PDLD----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 PD D C + + G+ Q+V A NV VG + A S + + I K+R Sbjct: 59 PDADKLQVCQVECLTEEGEPVIKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLR 117 Query: 111 GIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 G+ S GM CS E L+L +++ I P P+G + D L L+D + + LT N Sbjct: 118 GVVSEGMFCSVAEFGISSDLVLPEEAQGIYIFPEGTPIGLDVKDVLGLNDTVYEFELTAN 177 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R+DC + G++ + K I + ESI + ++ LC F V Sbjct: 178 RADCFSMVGLSREFGVMTNQKALFPVIMVNENGESIEGKASVSIEADDLCTRFTARVVTD 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V+ +P W++ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA + Sbjct: 238 VKVEPSPLWIQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRAKN 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD E +L+ ++IA R +AGI+GG + + TT V+ E A+++ +I Sbjct: 298 GEVLVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAVFNGPSI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 R+ K LG+ +++ RFERGV+ + + L+ +C + + ++ P Sbjct: 358 RRTAKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPTCKVGVGVI-DVYKNPVE 416 Query: 402 -RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + F +++ G ++ + +RIL L F V E DK VP+WR DV D+ Sbjct: 417 QHTVTFTAAQINDYLGTNIEKDKMVRILTALEFVVTEEGDKLSALVPTWRGDVTVMPDIA 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EE+ RIY D I P V ++ +++ T+ V LA M +++ +SF+ K+ Sbjct: 477 EEVARIYNYDNIA--PTIPVAVLSSGGMTPKKALTKEVTHALAKLGMTQIITFSFMHKDG 534 Query: 520 --QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++V Sbjct: 535 LSNMMLPEGDSRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANV 594 Query: 576 YE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DALS 627 YE + P ++ M+ GI G + G W+ R D +D K DAL Sbjct: 595 YEPKALPLTEVPH-ERPMSCGILMGKANQAG----WNQAE----RTTDFYDVKGIVDALL 645 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + + S G ++HPG S +++ Y GE HP + F L + F Sbjct: 646 T---ELGVTSYEVNRGTEPYFHPGVSAQYVVDGKMIAQY-GELHPQVSKNFDLPGKVYMF 701 Query: 688 EVYLD---SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRL 743 E+ L+ S+ I + T S RDLA + + +G +++IIK + Sbjct: 702 EINLEAVLSLTIPPFRYTS------FSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEY 755 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 ++ ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 756 LESASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 795 >gi|71892135|ref|YP_277867.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|93140697|sp|Q492V0|SYFB_BLOPB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71796241|gb|AAZ40992.1| phenylalanine tRNA synthetase, beta-subunit [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 797 Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 230/828 (27%), Positives = 413/828 (49%), Gaps = 56/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT-------IVKVLSVE 53 MKF+ W+++ ++ +S ++ D LT G +V + L P T I +++ + Sbjct: 1 MKFSEMWIREWINPPISSIELADQLTMAGFKVNE------LKPVTNIFYGVVIGEIVECK 54 Query: 54 RNPDL-DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 +P+L + I +++ G ++ + +VC APN R + A G+ +P+ I ++ I+G Sbjct: 55 MHPNLHNVWITKVNNGDNKLLNIVCNAPNCRKNIRVAVAQIGAMLPDGRKI-KLKTIQGK 113 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +S G++C+ L ++ + I+ELPI+AP+G +YL L+D II++++TPNR DC+ V Sbjct: 114 QSEGILCTFSALGITSHTVGIIELPINAPIGENFYNYLRLNDNIIEINITPNRGDCLSVI 173 Query: 173 GIALDLVAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNV 229 GI+ ++ A KLK+I I P ++ IP+ I ++ D+ C F +K + + Sbjct: 174 GISREIAAINHLKLKKIKIESIIPTINDIIPISI--EVPDT--CPQFFGRILKNIHITSP 229 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 P W+ ++L+ G+ S++ ++DI NYV L+ G+P HVFD +I +++ +R + GE + Sbjct: 230 TPLWIAEKLRRCGICSVNIVIDIVNYVLLELGHPIHVFDYKKIDGNIIRIRFSKIGEILT 289 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIG-GKHAGCDDNTTDVLVEVALWDPINIARSG 347 DN L P+ +VI+ + SIAG I K++ C + T ++++ A + P IA Sbjct: 290 LSDNNSLKLLPNTIVISDCKKPLSIAGTITPNKYSICSE-TRHIILQSAFFTPSVIASQS 348 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIV 405 + + + RGVD L + SL++ CGG I N + KP I+ Sbjct: 349 TLYHMHDLYSFHYARGVDPSISKLALDRVTSLLIRSCGGYPGPIINMTNKSMLPKPTNII 408 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +++ ++ G + + IL+RLGF + +++ P+WR D+ + +L+ EI R Sbjct: 409 LHRTKLDKIIGFHILDSEITHILKRLGFQTEFSDNIWKILPPTWRFDISIEENLIAEITR 468 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLS-LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 I+G + I L + D+ + S + SR +K +L R E++ +SF++ L Sbjct: 469 IHGYNNIPCVSLCTNFITDRSHASTIPLSR---IKNLLIDRGYQEIMTYSFVNYNIQKLL 525 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------EN 578 + L + NPI+++MS MR SL GL+K N +R +FE + EN Sbjct: 526 HPQKIPLILKNPITSEMSTMRLSLWSGLIKTVIYNQNRQQKQMKLFESGICFIPQKNAEN 585 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 Q M AGIR G R + VD +D K D +++ L + Sbjct: 586 QV--NQDLMIAGIRSGL-------RFNEHWDLTKVCPVDFYDIKGDVEALLNITNKLHCI 636 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 RF+ H G+S I I +GY G HP I L + + FE+ + I Sbjct: 637 RFKKYTHPALHSGQSAAIYLK-NICIGYIGMIHPTIQMKLNLRSQVLVFELSWNMI---- 691 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV---NIIKNVDRLIDDVTVFDVFQG 755 + K+ +S RD++ IV + + +++ I N D+LI D+ + DV+ G Sbjct: 692 -SQFTLPKITTISKFPKNFRDISIIVPNKVASESVIIECKKIANEDQLI-DIKLSDVYTG 749 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ +G KS I++ Q T ++++I ++++ + K+ + LR Sbjct: 750 QNIAKGFKSFTIRLFFQSKTHTLKEEEISDIVNKCSIILKKRFHGTLR 797 >gi|238854478|ref|ZP_04644817.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|260665474|ref|ZP_05866321.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii SJ-7A-US] gi|282934548|ref|ZP_06339800.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313471841|ref|ZP_07812333.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] gi|238832905|gb|EEQ25203.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 269-3] gi|260560742|gb|EEX26719.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii SJ-7A-US] gi|281301386|gb|EFA93678.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|313449009|gb|EEQ68246.2| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 1153] Length = 802 Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 228/798 (28%), Positives = 398/798 (49%), Gaps = 35/798 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WL+D L D+ ++ + +T G+E+ VD+ E L + VL E +PD D Sbjct: 1 MLVSYKWLQDFLKLDIDPNELAEKITRTGIEIASVDHPMEGLKKLVVGHVLECEMHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRG+ S GM+ Sbjct: 61 HLHITQVDIGEDEPIQIVCGAPNVAAGEYVIVALHGARIAGNEKI-KRGKIRGVVSNGMI 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C +E+ SD + I P G + + L + D I+D +TPNR+D + + Sbjct: 120 CGLQEIGFSDSVVPQEFADGIFVFPDAIKPGTDVYEALGMDDYILDFDITPNRADTLSME 179 Query: 173 GIALDLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A + V A +G K++++ + S + L + D L F M V V+ Sbjct: 180 GAAYE-VGAIVGQKPKIEDVVLKGDGSDWTKELSVSAD---KKLAPKFLMRKVSNVKIAP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 +P W++ RL G+R I+ +VD TNY+ L G P H +DA+ + VR A GEK+ Sbjct: 236 SPLWLQIRLWNAGIRPINNVVDATNYIMLLTGQPMHAYDANAFAGKCEVRLAKKGEKLTL 295 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L+ E +L +++VI + ++AG++GG ++ TTDV++E A++DP + ++ Sbjct: 296 LNENELELDTEDIVITDGSKPVALAGVMGGLNSEVTSATTDVILESAVFDPALVRKAALR 355 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMN 408 ++S RFE+G++ L L+ + GT ++ I KP+ +I Sbjct: 356 HDARSESSARFEKGLNWDNTEKALNMAALLLRNHAEGTVNEGIIYAQNEEKPKCEITAKF 415 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + ++ G ++ E+ L I +RL F D+ V VPS R D+ KADLVEE+ RIYG Sbjct: 416 AYFNKILGTELSNEEILAIFDRLNFETKVSGDEVTVIVPSRRWDISIKADLVEEVGRIYG 475 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-GGG 527 D IKS L Q N +++ R+++ ++ ++ ++E +N+S S+E + LF Sbjct: 476 YDNIKSTQPVLGQTHGGYNAD--ETKVRHLRHLVEAQGLVETINYSLTSEELATLFEEKA 533 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 +++ P+++ + MR +L+ L++A N R + IFE VY++++ E ++ Sbjct: 534 LAPVKVEWPLNSARTTMRQNLMASLVEAASYNFARKQNEVRIFEQGRVYDHESDEYNEHT 593 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LRFESGAPS 646 + E + W E+ +D + K S+ + + + + +++ Sbjct: 594 HLAALYTGTAEETN---WQHIDEK----IDFYYVKGQVESLFDAVIKTSAKIEYKALKLP 646 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHP--NILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HP R+ I + + V G+ G+ P N+ D + G+E+ LD I TK+ Sbjct: 647 GMHPTRTAGIYINDQYV-GFIGQIAPLLNLFDKNLRGKELYGYELNLDLILPLMDGETKS 705 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKK 763 S V+RD++ +V ++I + + N+I+ N + + + V DV+QGK + GKK Sbjct: 706 MPAPKYPS---VERDMSLLVAENITSDEVANVIRENAGKYLVKLDVIDVYQGKHIEAGKK 762 Query: 764 SVAIQVLIQPLKDTFRDD 781 S+A ++ K+T D+ Sbjct: 763 SLAYKLTFLNEKETLTDE 780 >gi|139438685|ref|ZP_01772169.1| Hypothetical protein COLAER_01170 [Collinsella aerofaciens ATCC 25986] gi|133775765|gb|EBA39585.1| Hypothetical protein COLAER_01170 [Collinsella aerofaciens ATCC 25986] Length = 817 Score = 306 bits (784), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 239/842 (28%), Positives = 406/842 (48%), Gaps = 63/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ + WLK +D + + D G EVE +D E+ KVL+ +PD D Sbjct: 1 MRVSYDWLKTMIDIPEDPKTLSDEYIRTGTEVEAIDTVGESFDHVVTAKVLTKTPHPDSD 60 Query: 60 ----CAILRIDT-----GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 C++ D G +Q+VCGA N G V A G+ +P ++ + K+R Sbjct: 61 HMYVCSVDVGDKNLDADGNPAPLQIVCGAQNFEAGDHIVTAMIGAVLP-GDVKIKKSKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ S GM CS +EL L D + IM LP D P G ++Y+ SD ++D +TPNR DC+ Sbjct: 120 GVVSMGMNCSARELGLGGDHSGIMILPEDTPCGMPFAEYVGSSDTVLDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPL----SSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + G+A + G ++ ++ P + + E+ ++ D LC + V+ V+ Sbjct: 180 MIGMARE---TGAIFDRDFHVELPAIKAETGRATDDELSVEIADEGLCDRYVARIVRNVK 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRA 281 +P+WM +RL A+G+R + +VDITNYV + G P H FD + + VR A Sbjct: 237 VGPSPDWMVKRLNALGVRPHNNIVDITNYVMMLTGQPLHAFDLDTFAARDGHRRVVVRAA 296 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 EK LD +E L +I R ++AG++GG + +D+T DV+VE A ++ Sbjct: 297 QQDEKFTTLDGEERVLDAGMGLITDGERPVALAGVMGGMDSEIEDDTVDVMVESACFNAG 356 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 + + ++L +I+D+ RFER VD G + V +LI + GG + + ++ P Sbjct: 357 RTSHTSRDLSLISDASIRFERQVDETGCVDVANVTCALIEEIAGGEVAPGYV--DVFPAP 414 Query: 402 RKIVFMN---SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 + I + + V + G D+ + R L RLG +V + + F VS PS+R D+ + D Sbjct: 415 KTIDSIKLRLARVHAICGADIEPDFIERSLTRLGCTVERDGEDFMVSPPSFRPDLPREID 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L+EEILR++G+ ++ + +P + L+ +Q TR V +L + + E + F + Sbjct: 475 LIEEILRLWGMGRVTAT-IPAAK-NHIGGLTREQKLTRKVGEILRACGLNETTTFGFAAP 532 Query: 519 EQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS- 573 G G + ++NP+ A+ + MR SLLPGLL++ N + ++EV Sbjct: 533 GDLEKIGMPTEGRGCPVVLMNPLVAEQTEMRRSLLPGLLQSVAYNEAHGTPNVHLYEVGS 592 Query: 574 --HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIE 630 H EN + + AG+ G WS++S + R + F K ++E Sbjct: 593 LFHGRENASLPKETKSVAGVLSGQ---------WSERSWNMKYRKLRFFFGKG----IVE 639 Query: 631 PFVS---LDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 ++ ++ +RF E + ++ PGR+ + S VLG+ GE HP + G+ + Sbjct: 640 ELLAQLRIEKVRFRPVEGESYAFLQPGRAAEV-LSGGTVLGWVGEIHPEARETMGIDEVV 698 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRL 743 FE+ LD + + + ++ S V+ DLA +VD + L I + +L Sbjct: 699 VAFELDLDKLIKGARNQENYRE---FSQYPAVEHDLAIVVDNTVTCEDLERRITSAGGKL 755 Query: 744 IDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 ++ V +FDV++ +G GKKS+A + + T +++ +IV V K N + Sbjct: 756 LEGVRLFDVYRDPIRIGAGKKSMAFALTYRSDDHTLTSEEVEKAHQKIVTKVCKGVNGEV 815 Query: 803 RS 804 R Sbjct: 816 RG 817 >gi|332664789|ref|YP_004447577.1| Phenylalanyl-tRNA synthetase beta chain [Haliscomenobacter hydrossis DSM 1100] gi|332333603|gb|AEE50704.1| Phenylalanyl-tRNA synthetase beta chain [Haliscomenobacter hydrossis DSM 1100] Length = 821 Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 253/847 (29%), Positives = 413/847 (48%), Gaps = 71/847 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERN 55 MK +L+WLK +L+ D +S EK+ + LT IGLEVE ++ E+ L+ + V+ E++ Sbjct: 1 MKVSLNWLKQYLNLDGLSPEKVGEILTDIGLEVESIERTESIKGGLAGVFVGHVVEREKH 60 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC---IPENNMIVNVRKIRG 111 P+ D ++ ++D G + +VCGAPNV G + A G+ I + + + KIRG Sbjct: 61 PNADKLSVTKVDIGTGNLLNIVCGAPNVAAGQKVLVATVGTTLYPIEGDPITLKKGKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIG 170 +S GM+C+E EL L D A IM LP D PVG DYL+L D +I++ LTPNRSD Sbjct: 121 EDSEGMICAEDELGLGHDHAGIMVLPPDTPVGQSAKDYLQLEEDHLIEIGLTPNRSDATN 180 Query: 171 VRGIALDLVAA---GLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 G+A DL AA G E+ + + + S+P+E+ ++++ C ++ +K Sbjct: 181 HLGVARDLAAALKINYGHSGEVCVPEVSKFKVDNHSLPIEV--SVENTEACPRYSGVVIK 238 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 G+ +P+W+++RL+AV +R I+ +VD+TN+V + G P H FD + I + V+ Sbjct: 239 GIVVGESPDWLKRRLQAVDVRPINNIVDVTNFVLHELGQPLHAFDLNEIKGRKIIVKTLP 298 Query: 283 SGEKILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +G K L+LD E L ++++I D I G+ GG H+G D+T ++ +E A + P Sbjct: 299 AGSKFLSLDEIERTLHAEDLMICDGDSTGMCIGGVFGGLHSGVKDSTVNIFLEAAHFSPT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYK 400 I RS + TD+ FE+G D + L+ L+ L GG AS+I Sbjct: 359 YIRRSSMRHNLRTDAAKVFEKGSDPNVTVFALQRAALLMQELAGGEIASEIIDIYPAPVV 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 P++I + V L G+ + + +IL G S++ +K F V+VP+ + DV AD+ Sbjct: 419 PQQITVNYTYVNTLLGVSLSPAEVQQILTAQGMSIVSADEKTFTVAVPTNKADVTRPADI 478 Query: 460 VEEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRT---RYVKRVLASRAMMEVVNWSF 515 VEEILRIYG +++ SE ++ L+ Q T + LA+ E++ Sbjct: 479 VEEILRIYGFNRVAISEKFSISAA-----LAPQPDPTLVRNAIGDFLAAAGFNEIMA--- 530 Query: 516 ISKEQSVLFGGGQRELE------ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S QS + + + I N + + MR +L L+A N +R + Sbjct: 531 VSLSQSRYYRQAFKNIADEELVYINNTSNVQLDIMRPDMLMSGLEAIVHNQNRQQTRLRL 590 Query: 570 FEVSHVYEN-----DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE VY D +G R G S + S + S + + L + Sbjct: 591 FEFGKVYRFKNGGIDEKAQLSIFLSGDRFGKSWLMQSA---FEGSSNKTPYFTLKGYVQN 647 Query: 625 ALSVI------EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 LS + E V D RF G YH G ++ FG ++ Sbjct: 648 VLSRLGYEGYQETVVENDE-RFAYGL--QYHRGPQTLVT---------FGRVSSALVKEM 695 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 G+ N + D++ S +K+ T + V S RDLA I++ I + I + Sbjct: 696 GVRNEVYAAVFEWDTLLKSLRKQNVTYQEV--SKFPSTSRDLALIIENSIKFSDIAAIAR 753 Query: 739 NV-DRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 V ++I DVT+FDV++ + LGEGK+S A+ L + + T D ++ +M++++ Sbjct: 754 KVGKKMIKDVTLFDVYENAQQLGEGKRSYAVSYLFEDAEKTLEDKEVDKVMNQLIGEYEA 813 Query: 797 KTNAVLR 803 K A++R Sbjct: 814 KLGALIR 820 >gi|260906303|ref|ZP_05914625.1| phenylalanyl-tRNA synthetase beta subunit [Brevibacterium linens BL2] Length = 861 Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 259/887 (29%), Positives = 414/887 (46%), Gaps = 109/887 (12%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ L+WL D++D D + SIGLE E E P + +VL + + Sbjct: 1 MRVPLNWLADYVDLPADTDPHALAAEFASIGLEEEDFFGPEITGPLVVGRVLELVKEEHS 60 Query: 59 DCAIL---RIDTG-KHQE----------------IQVVCGAPNVRVGLLGVWAPPGSCIP 98 + + R+D G +H E ++CGA N VG L V PG+ +P Sbjct: 61 NGKTINWCRVDVGPEHNEDLDDPKDPQPGEERPSRGIICGAHNFVVGDLIVACLPGAVLP 120 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD----YLELSD 154 + + RK G +S GM+CS KEL L +D I+ L D + G D L L Sbjct: 121 -GDFQIAARKTYGHKSDGMICSAKELGLGEDHDGIIVL-TDLGLSGEPGDDAIALLGLDQ 178 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS--CPLSSES-----IPLEIKFD 207 +DV++TP+R + +RGIA + +I + P ++ + + +E Sbjct: 179 VTLDVNVTPDRGYQLSMRGIAREYAQMKGQSFTDIGAAEVAPTNAATDDGFPVSIEDSNP 238 Query: 208 LDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 +++ + C F V G+ P WM++RL+ G+R IS VD+TNYV L+ G P H Sbjct: 239 INEVAGCDQFTAVQVTGLDPQARTPFWMQRRLQQAGMRPISLTVDVTNYVMLELGQPLHA 298 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA--------SDGRIQSIAGIIG 318 +D + + D + VRRA +GEK LD+ E L P++++I G+I +AG++G Sbjct: 299 YDTALLGDEIVVRRATAGEKFTTLDDVERKLDPEDLLITDRGAGASGKGGKIIGLAGVMG 358 Query: 319 GKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS 378 G TTDV++E A +DPI+IARS + + +++ RFERGVD + + Sbjct: 359 GADVEVHPGTTDVVIEAAHFDPISIARSSRRHRLSSEASRRFERGVDPKLGPVAARRCAD 418 Query: 379 LILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS--VI 436 L++ L GGT S +P I V L G+ + +LE +G + VI Sbjct: 419 LLVELAGGTLSPATTQVGQAPEPTVIELPVERVASLVGVQYTTAEVTGLLEGIGATIDVI 478 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRT 495 G+ D+ V+VPSWR D+ + DL+EE+ R G D+I S +P + L++ Q Sbjct: 479 GK-DRLAVTVPSWRTDITDAVDLIEEVARTGGYDRIPSIQP----AARAGKGLTVAQKAR 533 Query: 496 RYVKRVLASRAMMEVVNWSFIS---KEQSVLFGGG--QRELEILNPISADMSNMRTSLLP 550 R + +LA+ EV+++ F + +Q L ++ + + NP+S D+ MRT+LL Sbjct: 534 RRISNLLAADGFTEVLSYPFTNDKRDDQLRLEADDVRRKHVRLANPMSEDLPLMRTNLLS 593 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEG-------------------------Q 584 L+ RN R D A+FE V + PEG Q Sbjct: 594 TLVDLVVRNQGRGAKDVALFEAGLVSTSAGLPEGPGPRHLPGYHPTEAELDKIYASVPHQ 653 Query: 585 KYMAAGIRKGSS---GIEGSGRLWSDKSEERCRFVDLFDA--KADALSVIEPFVSLDSLR 639 Y AGI G++ G+ G GR + D+ D + A++ +E V D + Sbjct: 654 PYHYAGIISGNAEMPGVWGKGR--------KAEATDVIDTVRRIVAVNGLEVTVEADQI- 704 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 AP +HPGR+ + VLG+ GE HP + + GL GFE+ LD++ + Sbjct: 705 ----AP--WHPGRAAKFVLADGQVLGHAGELHPKVCENLGLPARTVGFEIDLDALLAQED 758 Query: 700 KRTKTKKVVHLSSLHPVKR-DLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 R + S +PV R D+A IVD +P TL ++ ++ + FD++ G Sbjct: 759 LRAWDGAL----STYPVSRQDVALIVDAELPTQTLAATLREGAGEELELLETFDLYTGDQ 814 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 L EGKKS+A ++ + T + D+ + + + ++ A +RS Sbjct: 815 LPEGKKSLAFRLTFRAPDRTLKADEASAMREAATKLAAERHGAEVRS 861 >gi|120601762|ref|YP_966162.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris DP4] gi|120561991|gb|ABM27735.1| phenylalanyl-tRNA synthetase beta subunit [Desulfovibrio vulgaris DP4] Length = 798 Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 408/827 (49%), Gaps = 64/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL++ + + + ++ D LT +GLE+E++ +A+ P + V+S ER+P+ D Sbjct: 1 MLLSLKWLREFVPFEGTAAELGDRLTMLGLELEEIIRPFDAIEPIVVGHVVSRERHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ + + +VCGAPNV G A G+ +P M++ K+RG S GM+ Sbjct: 61 KLSVCKVDVGQGEPLDIVCGAPNVAAGQRVPVALVGTTMP-GGMVIKKAKLRGQPSHGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L +D IM LP +G RL D L+L + D+++TPNR+DC+ V G+A ++ Sbjct: 120 CSERELGLGEDHDGIMVLPESFRIGARLVDELDLDREVCDIAITPNRADCLSVLGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLE---------IKFDLDDSSLCKGFAMCCVKGVRNNV 229 A PL+ ++ L+ ++ D+ D+SLC F ++G Sbjct: 180 ALA---------FGLPLTMPALDLKEEGADASNALRIDIPDASLCPLFHGRVLEGAAVRK 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P+WMR RL AVG+R IS +VD+TNY+ ++ G P H +D ++ + V A GE++ Sbjct: 231 SPSWMRYRLIAVGVRPISNIVDVTNYILMELGQPLHAYDLDLLAGGRIEVSAAREGERLT 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L+ ++++I + +AG++GG D ++ V +E A++ P I ++ + Sbjct: 291 TLDGVERVLTSNDLLIRDGEKPVGLAGVMGGAETEISDKSSRVFLEAAVFRPGTIRKTAR 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 LG+ +++ YRFERGVD + LI L G T IC + ++ + F Sbjct: 351 RLGLSSEASYRFERGVDQVVCTYAMNRAAQLIAGLSGATLRPGICHNEPLPWQAPVLRFR 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + L GI + LERLG V + ++V+ PS R+D E +ADL+EE+ R+ Sbjct: 411 RTRAEALLGISLDETFCRETLERLGCKVDAADAADWKVTAPSHRRDFEREADLIEEVARV 470 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFI-SKEQSV 522 G+D I EP+ + +S+ + +K A + E +N+SF+ K+ Sbjct: 471 RGMDTI--EPVLPKVMRPLDRAGAPESKYSFWLRLKHWAAGLGLNEAINYSFVGQKDLDH 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + I+NP++AD + +RT L PGLL+ N+ + A +FEV+H++E D Sbjct: 529 LNLAVDGRIPIMNPLTADQNVLRTELAPGLLQNLRHNIAQGNAGLRLFEVAHIFEADA-- 586 Query: 583 GQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIE---PFVSL 635 + RL + + + + V+ AD ++E F+ L Sbjct: 587 ----------TSDTTARERARLDILVYGSRYDSQWPHVEADADYADIKGIVEHCLAFLHL 636 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + F A HP ++ + + +G G P I D + + +L + Sbjct: 637 EGATFTLAA---SHPFLMPCVEVAVQGRQVGVIGRVRPEIADAYHARK-----DAWLADL 688 Query: 695 PISQKKRTKTKKVVHLSSL---HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + + + SL PV+RD+ + G +++ I + L+ V + Sbjct: 689 DLDVLRELHDAARIAFRSLPVYPPVRRDITVAAPGSLQVGAVLDHILGLRLPLLCGVELI 748 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 DVF+ + G+ ++++ ++ + T +D ++ D++ ++V+K Sbjct: 749 DVFEPE--GKDERNLTFRMTFRHASRTLKDAEVDKERDKVAHSLVEK 793 >gi|291166583|gb|EFE28629.1| phenylalanyl-tRNA synthetase, beta subunit [Filifactor alocis ATCC 35896] Length = 790 Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 237/832 (28%), Positives = 406/832 (48%), Gaps = 71/832 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M L WL+D+++ D+S EK D +T G + E+V++ EA+S + K+ + ++PD D Sbjct: 1 MILPLKWLRDYIEMDISAEKFADQMTLTGTKSERVEHIGEAISDVVVGKITEITKHPDAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I+ ++D G+ + Q+V GA N++VG A G+ +P+ I K+RG+ S GM+ Sbjct: 61 KLIVTQVDVGEEVK-QIVTGANNIKVGDYVPVAMHGAKLPDGTKIKR-GKMRGVVSDGML 118 Query: 119 CSEKEL-----MLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL LS++ + + + P G+ + D L+L D II+ LT NR DC + Sbjct: 119 CSAGELGIDSKFLSEEQKNGLYILEGEPALGQDIRDVLDLKDAIIEFELTANRPDCNSII 178 Query: 173 GIALDLVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA + A L K E+ I + + E + + ++++LC + + V+ +P Sbjct: 179 GIAYE-AKATLDK--EVTIPTLKVKEEGANIGVDVKCENNNLCGRYMAREITDVKIAPSP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 ++++RL G+R I+ +VD+TNYV L+ G P H FD ++ + +++A G+ + L Sbjct: 236 YYIQRRLIESGIRPINNIVDLTNYVMLEYGQPMHAFDYDKLEGHTIYIKQASDGQSCITL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E L + I ++ ++ G++G + D++TT +++E A +D I + K L Sbjct: 296 DEEERKLDSSMITICDSNKVIALGGVMGASCSQIDESTTHIVLESAHFDADTIRATSKKL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNS 409 G+ TD+ RFE+G+D L L+ L GT + + V F + Sbjct: 356 GLRTDASARFEKGIDRYRCEKALNRFCQLVEELEIGTVCKGFVDTATELDDKSTVTFSKN 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V + GI+ E+ IL +L F E D P +R D+E+ AD++EEI RIYG Sbjct: 416 RVNEVIGIEFSSEEICSILSKLNFESKIEGDMITTVAPEYRTDIEKIADIIEEISRIYGF 475 Query: 470 DQIKSEP-----LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQS 521 + + S P +P T+ E + L + +K + E++ +SF+S E++ Sbjct: 476 NNVVSAPIVGEIIPATKSESR----LYEDS---MKAFAMKNGLTEILTYSFVSPIGVEKA 528 Query: 522 VLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--EN 578 L + + ++LNP+ + S MRTSL+P +L+ N R FA FE +++ + Sbjct: 529 KLSETKENDFVKLLNPLGEETSVMRTSLIPNMLEVISMNAARKNEFFAGFEFGNIFCLKQ 588 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 P QK AG+ K E D F K + L+ L Sbjct: 589 SNPLEQKSFVAGVY--------------GKEE------DFFSLKGRIEGI------LNGL 622 Query: 639 RFES------GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 R++S +HPGR I E V G GE HP F + + E+ Sbjct: 623 RYQSRVYLPNKEHPTFHPGRCADIFIGEEKV-GILGEVHPKAASAFNIKKKVYLCEL--- 678 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFD 751 IP K + +KRD+A +VD++ + II KN LI+ + +FD Sbjct: 679 DIPFLMSLFDNMMKYRQIPKFPAMKRDIALVVDKNQYVSEIEQIIWKNGKSLIEKIELFD 738 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++G + + KKSVA V+ + + T D+++ + ++I++ + +K +AVLR Sbjct: 739 IYEGDQIEKDKKSVAYSVVYRKKEATLTDEEVNRIQEKILKELEEKLHAVLR 790 >gi|330718406|ref|ZP_08313006.1| phenylalanyl-tRNA synthetase subunit beta [Leuconostoc fallax KCTC 3537] Length = 822 Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 239/844 (28%), Positives = 429/844 (50%), Gaps = 63/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEK--ICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVER 54 MK L WL ++LD +++ + I D + I +VD+ + L+ + +V+S+ Sbjct: 1 MKINLEWLNEYLDQPLAVTESDISDLVEEIERTSVEVDDYKTLADKQDGLIVAEVMSIAT 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVR--KI 109 +PD D I ++D G+ Q++QVV GAPNV VG + A G+ I E+ ++ + K+ Sbjct: 61 HPDSDHMVITQLDIGQSQQVQVVTGAPNVAVGQFVILAQVGAHIINHESGELIELSQVKL 120 Query: 110 RGIESTGMMCSEKELML------SDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDV 159 RGIES GM+ + +E+ D A I E D G L + D ++D Sbjct: 121 RGIESNGMLVALQEIGFDAKIAPKDFEAGIFVFNPEDIKDVSTGDDALAVLGMHDIVVDT 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP----LSSESIPL-EIKFDLDDSSLC 214 LTPNR+D + + G A + G ++ + ++ P + E++ +I +D+ SL Sbjct: 181 DLTPNRADMLSMIGTAYEF-----GAMRHVTVTEPDFDLIEYETLAADQINVVIDEPSLV 235 Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS- 273 +A+ + V +P W+++RL G+R I+ +VDITNY+ L G P H FD +++ Sbjct: 236 SKYAVRVMNNVTVQDSPLWLQKRLWNAGMRPINNIVDITNYMMLMYGQPIHAFDLDKLTG 295 Query: 274 DVLTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 L VRRA E + LD E L S +++VIA D R +AG++GG + D NT +++ Sbjct: 296 QTLHVRRAGEDEILTTLDGNERHLRSGEDIVIADDQRALMLAGVMGGMSSEVDANTKNIV 355 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDI 391 +E A+++ + + + + +++ RFERGV+ L H +L+ L G A Sbjct: 356 IESAVFNSTLVRATARRHNLHSEASSRFERGVNSDNTFNTLDHAAALVDQLAQGQVAKGR 415 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 +A + KI + V +L G + + D I +RL F+ V+VP+ R Sbjct: 416 VVAVDKQPPIIKIQLTSQRVNQLLGTQLTLADIATIFDRLAFTYENNGTALIVTVPARRP 475 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ +ADL+EE+ R++G D + LP+ + LS +Q + R +++ S + + + Sbjct: 476 DISIEADLIEEVARLFGYDNLPV-TLPVGPTTLGK-LSHRQRKMRATRQIFESLGLNQAI 533 Query: 512 NWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 ++ + E++ F Q+ + + P+S+D + R ++L GLL NV ++ D A+ Sbjct: 534 SYVLTTAEKAQKFTLAQKRPTVSLSYPMSSDRTTARQNILSGLLDDVAYNVAHSVHDIAL 593 Query: 570 FEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +E V+ EN+ P+ +++ AG+ G E + W + ER VD +D K Sbjct: 594 YEQGRVFFAKNENELPQEVEHV-AGVLVG----ELAESHWQKEKAERT--VDFYDIKGIV 646 Query: 626 LSVIEPF-VSLDSLRFESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 ++ +S S+R+ A Y HPG++ I + +I LG+ G+ HP+ L L Sbjct: 647 AQYLDEIGISEKSIRYV--ATDQYPDMHPGQTADIY-AGDIHLGFVGQIHPSTLKAQKLP 703 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV- 740 + GFE+ L+ + + + +K+ S V RD+A +VD +I T+ ++I + Sbjct: 704 R-VFGFELNLEHVFSNIDEDILYQKI---SRFPQVSRDIALLVDDNISNATIESVIWDTA 759 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +L+ DVT+FD++ G++L +GK+S+A + Q +T + D+ +++ + +V Sbjct: 760 YSKLV-DVTLFDLYTGENLSKGKRSLAYTLTYQDDDETLVETDVNTDFEKVKQALVSGLG 818 Query: 800 AVLR 803 A +R Sbjct: 819 AEIR 822 >gi|25028077|ref|NP_738131.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium efficiens YS-314] gi|259505629|ref|ZP_05748531.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium efficiens YS-314] gi|30316231|sp|Q8FTP0|SYFB_COREF RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|23493361|dbj|BAC18331.1| putative phenylalanyl-tRNA synthetase beta chain [Corynebacterium efficiens YS-314] gi|259166794|gb|EEW51348.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium efficiens YS-314] Length = 835 Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 237/788 (30%), Positives = 379/788 (48%), Gaps = 85/788 (10%) Query: 67 TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 TG++Q I +CGA N G V A PG+ +P + + R+ G S GM+CS EL L Sbjct: 81 TGENQSI--ICGARNFAEGDTVVVALPGAVLP-GDFAIGARETYGRMSAGMICSAAELGL 137 Query: 127 SDDSAS-IMELPIDAPVGGRLSD----YLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA 181 +D S I+ LP ++ G+ D L L D + +V++TP+R + RG+ +L +A Sbjct: 138 ADKQNSGIITLPAES---GQPGDDARAVLGLDDTVFEVNVTPDRGYALSARGLTRELASA 194 Query: 182 ---------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-AP 231 ++ I ++ P + + I D+ + + F + V G+ N +P Sbjct: 195 FNLTYTDVAEDTRVAGIELTAPEPAGEL---IDIDVREETNTVRFGLRKVSGIDPNAESP 251 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+++ L R ++A D+TNYV + G P H FDA++I+ LTVR A GEK LD Sbjct: 252 FWLQRELMLCRQRPVNAATDVTNYVMMLLGAPMHAFDATKITGGLTVRNAQPGEKFETLD 311 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + DLS ++VVI + IQS+AG++GG + + TT+V E A+WDP +AR+ + Sbjct: 312 HVIRDLSGEDVVICDETGIQSMAGVMGGVTSEISNETTEVYFESAIWDPKTVARTSRRHK 371 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT--ASDICIARNITYKPRKIVFMNS 409 + +++ RFERGVD + L SL++ + GGT A I T I S Sbjct: 372 LSSEASRRFERGVDPAIVEVALDMACSLLVEIAGGTIDAGRTLIGEVPTMP--SITMPVS 429 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 L+G++ E + LE +G +V D V P+WR D+ ADLVEE+LR+ G+ Sbjct: 430 RPSELAGVEYSPETVVARLEEVGCTVSVNGDVLTVVPPTWRSDLTMAADLVEEVLRLEGL 489 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG---- 525 + I P + R LS Q R R + LA E++ F++ E ++G Sbjct: 490 EAI---PTIVPTAPAGRGLSDAQKRRRAIGHALAYAGYAEIIPSPFMNPETFDVWGLDAD 546 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEN----- 578 + + +LNP+ AD + + T+LLP +L A RNV R DF++F V V +E Sbjct: 547 DERRNTVTVLNPLEADSNVLSTTLLPSMLDAVRRNVTRGTGDFSLFGVQQVSFERGNGVS 606 Query: 579 ------------------DTPEGQKYMAAGIRKGS---SGIEGSGRLWSDKSE-ERCRFV 616 DT Q AA + G+ G GSGR ++ E R V Sbjct: 607 PMPSVKQRPSAEVVAELLDTLPEQPLHAATVGTGNIEFEGPWGSGRAYTYADAIESARIV 666 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 A A + + D L +HPGR + +V G+ GE HP +L+ Sbjct: 667 ------ARAAGIELELANADELP--------WHPGRCAALLVDGHVV-GHAGELHPQVLE 711 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 GL C E+ +D++P+ + LS+ + +D+A +VD+ +PA + + Sbjct: 712 RAGLPARTCAMEINIDALPLRENLPAPV-----LSAFPALHQDIALVVDETVPAEQVRAV 766 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + + L++ V +FDV++ + LGEGKKS+A +L + T D++ + E Sbjct: 767 VEEGAGELVETVELFDVYRSEQLGEGKKSLAFSLLFRAPDRTLTDEEANVARLAAAELAK 826 Query: 796 KKTNAVLR 803 ++ A +R Sbjct: 827 ERLGAEMR 834 >gi|293189888|ref|ZP_06608594.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces odontolyticus F0309] gi|292821191|gb|EFF80137.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces odontolyticus F0309] Length = 888 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 257/889 (28%), Positives = 414/889 (46%), Gaps = 101/889 (11%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 LSWL DH+D + + L +GLE E++ P + +VL+ + I Sbjct: 12 LSWLSDHVDVPEGTDAQALAAALVKVGLEEEEIHPARVTGPLVVGRVLTRVEETASNGKI 71 Query: 63 L---RIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + R+D G++ + ++CGA N V L V + PG+ +P + + Sbjct: 72 VNYCRVDVGEYNDAPGTGKEPSDLPSRGIICGAHNFDVDDLVVVSLPGAILP-GDFQIAA 130 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP------VGGRLSDYLELSDPIIDVS 160 RK G S GM+CS +EL L +D I+ LP P VG + +L L + +++++ Sbjct: 131 RKTYGHVSDGMICSARELGLGEDHDGIIVLPKYFPDREIPAVGTDIVTWLGLGEEVLEIN 190 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDSSLCK 215 +TP+R C +RGIA + + ++ + +++E P D D + + Sbjct: 191 VTPDRGYCFSMRGIAREYSHSTGASFRDPGLPGVIAAE--PPTANSDGFPVVFSDDAPIR 248 Query: 216 G------FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 G F V+G N P WM +RL+A G+RS+S VDITNYV LD G P H +D Sbjct: 249 GRVGVDRFVARIVRGTNPNAPTPRWMVERLEAAGMRSVSLAVDITNYVMLDLGQPMHAYD 308 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQSIAGIIGGKHAG 323 ++ + VRRA +GE ++ LD ++ +L P +++I RI IAG++GG ++ Sbjct: 309 LGALAAPIVVRRARAGETLVTLDEEKRELDPQDLLITDSPEGEGSRIIGIAGVMGGAYSE 368 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 + TTDVL E A +D +++ARS + + +++ RFERG D Q + V L+L Sbjct: 369 VGEGTTDVLFEAAHFDSVSVARSSRRHKLHSEAAKRFERGTDPQLPAVAAQRAVELLLEY 428 Query: 384 CGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKF 442 GGT + K I EV+RL+G+ E +L +G V G + F Sbjct: 429 GGGTVDAGVTDVDQRGKAVVISLPVGEVERLTGVAHAPERIAELLRTVGCVVEGPDNGAF 488 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V+ PSWR D+ ADLVEE+ R+ G D I P+ + L++ Q R L Sbjct: 489 TVTAPSWRPDLTLPADLVEEVARLDGYDNI---PVVMPIAPAGHGLTVAQKARRLAAATL 545 Query: 503 ASRAMMEVVNWSFIS---KEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGR 558 A ++EV ++ F+S Q + +RE + + NP++ D +RT++L LL GR Sbjct: 546 ADGGLVEVESYPFVSDTWDRQGIPADDPRREAVRLRNPMADDAPWLRTTVLDTLLDVAGR 605 Query: 559 NVDRAIADFAIFEVSHVYE------NDTPEGQK--------YMAAGIRKGSSGIEG--SG 602 NV R+ AD AIFEV+ V D P ++ + AGI I G +G Sbjct: 606 NVSRSNADVAIFEVAKVARPAGTVPADLPSAEERPSDEVIAALEAGIPAQPWHIGGVLTG 665 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVS------------LDSLRFESGAP----- 645 + R D ADAL + S +D + GAP Sbjct: 666 QAVPAGVLVNARAYDW----ADALEYVRRVASGLGVRVEVTRAWMDEVPAHKGAPMPAPA 721 Query: 646 ------SWYHPGRSG--IIKTSAEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + +HPGR ++ ++V + GE P FGL C FE+ +D++ I Sbjct: 722 TDPAAVAPFHPGRVARVFVRAGRDLVDVALAGELSPAACRAFGLPARSCAFEIDMDAL-I 780 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQG 755 SQ +V +S+ K D+A +V IPA + I++ +L + VT+FD+++G Sbjct: 781 SQMSEAPI-QVKGVSTFPLAKEDIALVVPSDIPASRVEQIVRQGAGQLAESVTLFDIYEG 839 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + EG +S+A + ++ T + + +++V K A LR+ Sbjct: 840 DQVPEGHRSLAFALRLRAADHTLTAKESLQVREQVVAKAAKVLGASLRA 888 >gi|332710104|ref|ZP_08430057.1| phenylalanyl-tRNA synthetase beta subunit [Lyngbya majuscula 3L] gi|332351062|gb|EGJ30649.1| phenylalanyl-tRNA synthetase beta subunit [Lyngbya majuscula 3L] Length = 814 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 240/850 (28%), Positives = 424/850 (49%), Gaps = 82/850 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ ++ E++ TLT G EVE +++ L+ ++ KVL VE +P+ + Sbjct: 1 MRISLNWLRELVEVTLTPEELAQTLTMAGFEVEDIEDLGTLADGVVIGKVLEVEPHPNAN 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +VCGA NVR + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLRVCQVDIGGSDPLNIVCGASNVRPDIYVPVATIGTYLPTIDLKIRASKLRGVRSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ L+ +SA I + P+G L L+D I+DV+ T NR+D + + G+A + Sbjct: 121 CSLAEVGLAKESAGIHIFEAETIPLGSDARPLLGLTDIILDVTSTANRADALSMVGVARE 180 Query: 178 LVA---AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 +VA A L + + +S P +S ++ L++ + C + ++GV+ +P+W+ Sbjct: 181 VVALTGASLSLPETVEVSIPEASHALTLKVS----EPKACPAYIGTVIEGVKIGPSPDWL 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 +QRLKA G+R I+ +VD+TNY+ L+ G P H FD R+ V + VR A SGE + Sbjct: 237 QQRLKAAGVRPINNVVDVTNYILLEWGQPLHAFDRERLQAVAGVENLTIGVRFANSGESL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD Q L P ++I ++ + ++AG++GG+ +DNT +++E AL+DP+ I RS Sbjct: 297 TTLDGQTRSLEPQALLITANDQPVAMAGVMGGEATEVNDNTQTIVLEAALFDPVTIRRSS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 ++ I T+S R+ERGV+ + K ++LI L GT + IA +P + Sbjct: 357 RSQSIRTESSARYERGVNQAELDIACKRAIALITELAAGTPTTQSIADQ---RPDPSTWA 413 Query: 408 NS---EVKRLSGIDVPI-----------EDSLRILERLGFSV----IGEYDKFEVSVPSW 449 S + R++ I P+ ED RIL LG + + +++V VP + Sbjct: 414 RSIELRLDRVNQILGPVNEAEELGEILPEDVERILTALGCQLQPRCTEDSPQWKVIVPPY 473 Query: 450 R-QDVEEKADLVEEILRIYGVDQI------KSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 R +D+E + DL+EEI R+YG D K+EP LS ++ R ++ Sbjct: 474 RYRDLEREIDLIEEIARLYGYDNFCDSLPDKTEP---------GYLSAEEFLKRKLRSQF 524 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 + + E+V +S + E+ Q ++ + NP+ + S++RT LL GL+ A N+++ Sbjct: 525 RAVGLTELVQYSLVKPEE-------QTQIRLDNPLFTEYSSLRTDLLSGLIDACQYNIEQ 577 Query: 563 AIADFAIFEVSHVYENDTPE---GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 FE+ ++ PE + AGI G+ I + SE + Sbjct: 578 GNGVLNGFEIGRIFWR--PEEGFAEADAIAGILGGN--ITQGNWVRGGHSEPMTWY---- 629 Query: 620 DAKADALSVIEPFVSLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 +A V+E S L E + HPGR+ + E LG FG+ HP + Sbjct: 630 ----EAKGVLESVFSRCGLTVEYQPDHSDPRLHPGRTASLWLQGE-KLGKFGQLHPQLRS 684 Query: 677 FFGLSNPICGFEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV- 734 G + + F++ LD I + T + SS + RD+AF + + Sbjct: 685 ERGFPDQVYVFDLDLDLILEALDRDEILTPRFKVYSSYPAIDRDIAFFAPLQVSVAEIER 744 Query: 735 NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + K L++ V +FD ++G+S+ E ++S+A +++ + T D ++ + ++ E + Sbjct: 745 STRKAAGNLLESVQLFDEYKGESVPEAQRSLAFRLIYRASDRTLTDAEVEPVHQKVREAL 804 Query: 795 VKKTNAVLRS 804 + LRS Sbjct: 805 EETFGVSLRS 814 >gi|227495380|ref|ZP_03925696.1| phenylalanine--tRNA ligase [Actinomyces coleocanis DSM 15436] gi|226831134|gb|EEH63517.1| phenylalanine--tRNA ligase [Actinomyces coleocanis DSM 15436] Length = 877 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 254/899 (28%), Positives = 421/899 (46%), Gaps = 128/899 (14%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 +SWLKDH++ + E++ L +GLE E + + P + +VL+++ + Sbjct: 6 ISWLKDHVEVLPGTNPEQLAADLVKVGLEEETIHPAKVKGPLVVGRVLTMQPEKQSNGKT 65 Query: 63 L---RIDTGKHQEI-------------QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + R+D G H + ++CGA N + G L V PG +P N + Sbjct: 66 INYCRVDVGVHNDAPGTGKEPSDLPSRSIICGAHNFKPGDLVVVILPGGVLP-GNFEIAT 124 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIM---------ELPIDAPVGGRLSDYLELSDPII 157 RK G S GM+CSE+EL SD+ I+ ELP +G L ++L L ++ Sbjct: 125 RKTYGHISDGMICSERELGFSDEHNGIIVLNEKFAEDELP---GIGEDLIEFLGLGQELL 181 Query: 158 DVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPL--EIKFDL--DDSSL 213 ++++TP+R C +RGIA + + K + ++ + E IP E F++ DD + Sbjct: 182 EINVTPDRGYCFSMRGIAREYSHSTGAKFTDPGLAKNYAGE-IPEANEAGFEVIVDDQAP 240 Query: 214 CKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 +G C V+G+ P WM +RL+A+G+RSIS VD TNYV LD G P H Sbjct: 241 IRGNVGCDRFVTRIVRGINPAAPTPKWMVERLEAMGMRSISLAVDATNYVMLDLGQPLHA 300 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQSIAGIIGGKH 321 +D ++++ + VRRA EK+ LD+ E +L P ++VI + R+ IAG++GG Sbjct: 301 YDLNQVTAPIVVRRALENEKLTTLDDVERNLDPQDLVITDSANGTGSRVLGIAGVMGGAT 360 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL--KHIVSL 379 + T DVL+E A +D +++ARS + I +++ RFERGVD ++P + + +V + Sbjct: 361 TEVTEETQDVLIEAAHFDSVSVARSARRHRIPSEAAKRFERGVD--PLLPAVAAQKVVDI 418 Query: 380 ILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY 439 ++ GGT N + +I+ SE RL+G++ P E + ILE +G V + Sbjct: 419 LVEYGGGTVDSAVSDLNNVGEKTQILMPASEPARLTGVEYPAERVVEILETIGCQVETQG 478 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP-LTQVEDKRNLSLQQSRTRYV 498 + V+ P+WR D+ E DLVEE+ R+ G D I +P L L + + R + Sbjct: 479 ENLLVTAPTWRPDITEACDLVEEVARLDGYDNI----IPVLPTAPAGSGLPDRLASRRAI 534 Query: 499 KRVLASRAMMEVVNWSFIS--------KEQSVLFGGGQRELEILNPISADMSNMRTSLLP 550 + LA +EV+++ F+ E V ++ + + NP+ +RTS+L Sbjct: 535 AQTLADCGFVEVLSYPFVGDAWDRCQIPENDVR----RQAVRLRNPLVESQPFLRTSVLD 590 Query: 551 GLLKATGRNVDRAIADFAIFEVSHV-------------------------YENDTPEGQK 585 LL RN R +FE+ V TP+ Sbjct: 591 SLLDIAQRNAARGAESIRVFELGMVTLPQGVKPAGIPSAAQRPHPKEIGELHRGTPKQPW 650 Query: 586 YMAAGIRKGSSGIEGSGRL------WSDKSE----------ERCRFVDLFDAKADALSVI 629 ++ G+ G S + + R+ W+D E + L+ A+A V Sbjct: 651 HL--GMVLGGSAVANNVRVGKRVFDWADVLEGAHAVAAAVGVKLEVAALYRESAEA-GVP 707 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGI--IKTSAEIV-LGYFGEFHPNILDFFGLSNPICG 686 +P + + A W HPGR+ + ++ IV +G GE HP ++ +GL Sbjct: 708 KPVAT------PADAAPW-HPGRAAVLFVRDGKRIVEVGRAGELHPRVVKTYGLPARSVA 760 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 E+ L+++ K K V S +P VK D+A +VD IP L+ IK L+ Sbjct: 761 MELDLEAL---LKLAPKNPIQVQPVSTYPVVKEDIAVVVDDSIPVAALLAEIKAAGGELL 817 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + +FD + G + EGK+S+A + ++ T D+ + I+ + KK +A LR Sbjct: 818 EQIALFDEYVGSQIDEGKRSLAFALRMRAADRTLAADETARVRSEIMALLEKKFSAKLR 876 >gi|145295525|ref|YP_001138346.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium glutamicum R] gi|140845445|dbj|BAF54444.1| hypothetical protein [Corynebacterium glutamicum R] Length = 835 Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 244/823 (29%), Positives = 384/823 (46%), Gaps = 91/823 (11%) Query: 39 EALSPFTIVKVLSVE-----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAP 92 E P +V ++E + P C + D E+Q +VCGA N + G V + Sbjct: 45 ETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANGTGELQSIVCGARNFKEGDTVVVSL 104 Query: 93 PGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDYL 150 PG+ +P + ++ R+ G S GM+CS EL L+D +S I P G L Sbjct: 105 PGAVLP-GDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDARQAL 163 Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE---------INISCPLSSESIP 201 L D + DV++TP+R + RG+ +L +A + I + P S+ Sbjct: 164 GLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSL- 222 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 I +L + + F + V G+ +P WM++ L G R ++A D+TNYV L Sbjct: 223 --INVELREETKAIRFGLRKVSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLL 280 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 G P H FDA++++ L VR A +GEK LD+ + L+ ++VVI D IQS+AG++GG Sbjct: 281 GQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEEDVVITDDNGIQSLAGVMGGL 340 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 + D TTDV E A WD I +AR+ + + +++ RFERGVD + L +L+ Sbjct: 341 TSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL 400 Query: 381 LSLCGGT-------ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF 433 + + GGT D+ IT K V SE L+G+D E + LE +G Sbjct: 401 VEIAGGTVDAGRTLVGDVPAMHPITMK----VTRPSE---LAGVDYSAETVIARLEEVGC 453 Query: 434 SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 +V D EV+ P+WR D+ ADLVEE+LR+ G++ I P + R L+ Q Sbjct: 454 TVAVSGDTLEVTPPTWRGDLTMSADLVEEVLRLEGLEAI---PTIIPTAPAGRGLTDAQK 510 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSL 548 R R V LA E++ F+ E ++G ++ + +LNP+ A+ + + TSL Sbjct: 511 RRRAVGHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLEAERNVLSTSL 570 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHV-YEN-----------------------DTPEGQ 584 LP +L A RNV R DF++F + V +E+ D+ Q Sbjct: 571 LPSMLDAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQ 630 Query: 585 KYMAAGIRKGS---SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 A + G+ G G GR ++ F D ++ + L + Sbjct: 631 PLHVATVGTGNIEFEGPWGKGRAYT--------FADAIESARAVARAAGVTLELAN---- 678 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + A W HPGR + V GY GE HP +L+ GL C E+ L ++P+ + Sbjct: 679 ADALPW-HPGRCAALLIDGTPV-GYAGELHPQVLEKAGLPARTCAMELDLSALPLVENLP 736 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 LSS + +D+A +VD+ IPA + +++ LI+ V +FDV++ + LGE Sbjct: 737 APV-----LSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGE 791 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A + + T D++ + E +K NA +R Sbjct: 792 NKKSLAFSLRFRATDRTLTDEEANEARLQAAELAKEKFNAEMR 834 >gi|315038836|ref|YP_004032404.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] gi|312276969|gb|ADQ59609.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus amylovorus GRL 1112] Length = 804 Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 233/815 (28%), Positives = 400/815 (49%), Gaps = 47/815 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ +V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQDPHALAEKITRTGVEIAEVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ +D + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFNDSVVPEEFADGIYVFPEDADVKPGQDVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINI----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A ++ A K K ++ P ++S+ +++ D L F + + GV+ Sbjct: 180 EGAAYEVGAIVDQKPKVEDVVLKEDGPDWTDSLDVKV-----DEKLASKFYLRKLTGVKI 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P WM++RL G+R I+ +VD+TNYV L G P H +DA + L VR A GEK Sbjct: 235 QDSPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDAKTFENGKLEVRLANKGEK 294 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+ +E +L P ++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 295 LTLLNEKEVELDPKDIVITDGEKPVMMAGVMGGLNSEITSETTDVILESAIFDPTLVRKA 354 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIV 405 T++ R+E+G + + L+ + T + I A + +P + Sbjct: 355 ALRHANRTEASSRYEKGTNWDATEKAINMAALLLRNDASATVDEGIIKAADTKREPVAVK 414 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S + ++ G ++ ED L+I +RLGF V + D V VP+ R D+ ADLVEE+ R Sbjct: 415 TTISHINKVLGSEISPEDMLKIFDRLGFPVDRDGDDITVHVPNRRWDISIPADLVEEVGR 474 Query: 466 IYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D +KS +PL E S ++ +K ++ + +ME +++S S E++ + Sbjct: 475 IYGYDNLKSTQPL---LAETHGGYSEKEEMMHRMKAIVEGQGLMEAISYSLTSPEKATRY 531 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ ++ P+++ S MR +L+ GL+ A N R A+FE VY++D Sbjct: 532 TKDPKDIVKVQMPLNSSRSVMRQNLMTGLVDAASYNFARKQTQLALFEQGRVYDHD---- 587 Query: 584 QKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 GI + SG +++ + + VD + K ++ + + + + + Sbjct: 588 -----GGIYNEHEHLAALYSGNTFAENWQHLTQKVDFYFVKGQLTNLFDAVGIDPEKVVY 642 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGLSNP-ICGFEVYLDS-IPIS 697 + + HP R+ I + V G G H L L N + G+E+ LD IP+ Sbjct: 643 RAESIEGMHPTRTAGIYIDKQYV-GMIGMIAHAVTLSDKALRNAELYGYEINLDVIIPM- 700 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK V ++RDL+ +VD+ + + N+IK N + + D+ V DV++G Sbjct: 701 ---LTKGMTAVPAPKFPAIERDLSLLVDKEVTNQEVENVIKSNAGKYLVDLKVIDVYEGS 757 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L KKS A + KDT D + MD+I+ Sbjct: 758 HLAADKKSFAYNLTFLNRKDTLTDKVVNNAMDKII 792 >gi|159037503|ref|YP_001536756.1| phenylalanyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] gi|157916338|gb|ABV97765.1| phenylalanyl-tRNA synthetase, beta subunit [Salinispora arenicola CNS-205] Length = 861 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 261/870 (30%), Positives = 405/870 (46%), Gaps = 127/870 (14%) Query: 1 MKFTLSWLKDHLDTDVSLEK--ICDTLTSIGLEVEKVDNREAL--SPFTIVKVLSVE--- 53 M+ ++SWL++++D L + L +G+EVE V + P + +V +E Sbjct: 1 MRVSVSWLREYVDLPAHLTPADLEQALVGLGIEVESVVDLAGTVTGPLVVGEVREIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N VG V PG +P + ++ Sbjct: 61 GFKKPIRFC---RVDVGDANGTGELQEI--VCGARNFAVGDRVVVILPGGVLP-GDFVIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTP 163 R+ G +S GM+CS KEL L DD I+ LP +P G + L D +++V LTP Sbjct: 115 ARRTYGRDSRGMICSAKELGLGDDHTGIIVLPGSSPAKPGDDARPVVGLDDVVVEVELTP 174 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINI-SCPLSSE--SIPLEIKFDLDDSSLCKGFAMC 220 +R + VRGIA +L A ++ + S P +E + P+E++ D C FA Sbjct: 175 DRGYQMSVRGIARELSHAFGVPFRDPGLASAPAGTEQPAYPVEVR----DPVGCDRFAAR 230 Query: 221 CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 V+GV +P WM +RL G+RS+S VDITNYV L+ G P H FDA RI+ L VR Sbjct: 231 MVRGVDPAAPSPAWMVRRLITAGIRSLSLPVDITNYVMLELGQPMHAFDADRITGALVVR 290 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQ-------------SIAGIIGGKHAGCDD 326 RA +GEK+ LD L +++VI G S+A ++GG+ + Sbjct: 291 RAVAGEKLTTLDGVARTLVGEDMVICDAGLPNRSPSAGADVGVPISLAAVMGGESSEVVA 350 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 T +VL E A WDP+ + R+ + + + + R+ERGVD + + V L++ GG Sbjct: 351 GTCNVLFEAAHWDPVMVGRTARRHRLFSAAAKRWERGVDPALPLVAIDRAVRLLVEHGGG 410 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFE-- 443 A + I PR V + +++ R G+ P +LE +G +V+ D+ Sbjct: 411 EAG-VEILDIDHVAPRTPVVLPADLPSRRVGVAYPPARVAALLEGIGCTVVTGADQLAAD 469 Query: 444 ---------------VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 V+ P+WR D+ + ADLVEE++R+ G D++ P L R L Sbjct: 470 PGEVGVAAGGAVSLVVTPPTWRPDLTDPADLVEEVVRLDGYDRV---PAVLPVAPAGRGL 526 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GG---QRELEILNPISADMSN 543 + QQ R R V RVLA + +EV++ F++ E + L G G +R + + NP+S + Sbjct: 527 TWQQRRQRAVARVLADQGYVEVLSPPFVAAELTDLLGLPAGDVRRRGVRLANPLSEEEPL 586 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE------NDTPEG-------------- 583 +RT+LL LL RN+ R D A++E+ V+ P G Sbjct: 587 LRTTLLGPLLGVLRRNLGRGQRDLALYEIGTVFHPRADVGTPPPMGVEHRPSDAEFAAAD 646 Query: 584 -----QKYMAAGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFV 633 Q A + G +G G+GR W+D E + D ++V Sbjct: 647 AVLPDQPRHVAVVLAGEVEPAGWWGAGRQAGWADAVEAARTVLAAAGIPDDRVTV----- 701 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 R AP +HPGR G + + +GY GE HP ++ L EV LD+ Sbjct: 702 -----RAAEYAP--WHPGRCGQLLVDG-VAVGYAGELHPAVVAGLELPRRTAAMEVNLDA 753 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDV 752 + +SS P D+A +VD +P + +++ L++ V +FDV Sbjct: 754 -----VPAAPVRPAPAVSSFPPALIDVALVVDAGVPVAQVQGALVEGAGDLLESVRLFDV 808 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + G+ LG G++S+A ++ TFR D Sbjct: 809 YAGEQLGAGRRSLAYKL-------TFRAPD 831 >gi|300787901|ref|YP_003768192.1| phenylalanyl-tRNA synthetase beta chain [Amycolatopsis mediterranei U32] gi|299797415|gb|ADJ47790.1| phenylalanyl-tRNA synthetase beta chain [Amycolatopsis mediterranei U32] Length = 855 Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 255/891 (28%), Positives = 407/891 (45%), Gaps = 123/891 (13%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNRE---ALSPFTIVKVLSVERN 55 M+ +SWL +HLD +V+ + + D IG+EV+ D RE P + +V VE Sbjct: 1 MRVPVSWLTEHLDLAEEVTPQDLADAFVRIGIEVD--DLRELGPVTGPLVVGRVAEVEEL 58 Query: 56 PDLDCAI--LRIDTGKHQEIQ------------------------------VVCGAPNVR 83 + + R+D G+ + ++CGA N Sbjct: 59 TEFKKPVRFCRVDVGEPADEAEDLDDDELDDEDDDEAGEFDEGPHGIKTRGIICGARNFV 118 Query: 84 VGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPI-DAPV 142 G L V A PG+ +P + + RK G S GM+CS +EL L DD I+ LP A Sbjct: 119 EGDLVVVALPGAVLP-GDFEIAARKTYGRISDGMICSARELGLGDDHTGILVLPPGTASP 177 Query: 143 GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSS 197 G + L L+D +I+++ TP+R + +RG+A +L V G L E+ + Sbjct: 178 GDDAQELLGLNDSVIELAPTPDRGYALSIRGLARELSNALDVPFGDPALLEVPAA---EG 234 Query: 198 ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW-MRQRLKAVGLRSISALVDITNYV 256 ++ P+ + +D C F + V G+ W MR+RL G+RSIS VD+TNYV Sbjct: 235 DAWPVHV----EDPEGCPRFVLRRVTGLDATAPTPWRMRRRLMLAGIRSISLAVDVTNYV 290 Query: 257 SLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGI 316 L+ G+P H F I L VRRA GEK+ LD+ E L PD+VVIA D + S+AG Sbjct: 291 MLELGHPLHAFATKAIQGDLVVRRAKPGEKLTTLDDVERTLDPDDVVIADDSGVISLAGT 350 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 +GG +TDVL+E A W+P I+R+ + + +++ RFER D Q + + Sbjct: 351 MGGASTEITPESTDVLLEAAHWNPAAISRTARRHKLFSEAAKRFERFTDPQ-LCAAAVEL 409 Query: 377 VSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK-RLSGIDVPIEDSLRILERLGFSV 435 + +L G A +P V M ++ +++G++ ++R L ++G V Sbjct: 410 AARLLRQYGDAAIQPGRTDEGVVEPNPPVVMPIDLPDKVAGVNYQRGVTVRRLTQIGCKV 469 Query: 436 -IGEYD----KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSL 490 +G D + PSWR D+ + ADLVEE+LR+ G D I S L R L+ Sbjct: 470 SVGTGDDGTGRVTAIPPSWRGDLRQPADLVEEVLRLEGYDSIPST---LPAAPAGRGLTD 526 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE-----ILNPISADMSNMR 545 Q R R V R LA +EV + F+ FG ++ + NP+ AD + + Sbjct: 527 GQRRVRSVSRALAEAGYVEVRPFPFVGDAVWDAFGLPADDIRRNAVVVRNPLEADRNRLA 586 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHV--------------------------YEND 579 T+LLPGLL RNV R + D +++ + V E Sbjct: 587 TTLLPGLLDTLQRNVSRGMKDVSLYHIGQVVLPAPNPLKVPDLGVDRRPSDEDLALLEAA 646 Query: 580 TPEGQKYMA---AGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVS 634 P+ ++A AG R +G G G W+D + A I Sbjct: 647 VPQQPLHVAVVLAGNRH-RAGWWGPGEPANWADAVQ--------------AARTIAEAAG 691 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ + P W HPGR ++ + +G+ GE HP +++ GL E+ LD+I Sbjct: 692 VELTVQAADLPPW-HPGRCAQLRVG-DWPVGHAGELHPKVVEALGLPPRTVAMELDLDAI 749 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVF 753 P+ + + +S PV D+A + +P+ L ++++ L++D+T+FDV+ Sbjct: 750 PLPDVRPAPS-----VSGYPPVLLDVALVAAAEVPSADLAEVLRSGAGELLEDITLFDVY 804 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ +G+GK+S+A ++ + T D+ D V ++ NA LR+ Sbjct: 805 AGEQVGDGKRSLAYKLRFRAPDRTLTVDEATKARDAAVAAAGERFNATLRA 855 >gi|229496967|ref|ZP_04390672.1| phenylalanyl-tRNA synthetase, beta subunit [Porphyromonas endodontalis ATCC 35406] gi|229316069|gb|EEN81997.1| phenylalanyl-tRNA synthetase, beta subunit [Porphyromonas endodontalis ATCC 35406] Length = 834 Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 249/857 (29%), Positives = 411/857 (47%), Gaps = 77/857 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLE---VEKVDN-REALSPFTIVKVLSVER 54 M + WL D+L +S E++ DTLTSIGLE VEKVD+ + L + +V + E Sbjct: 1 MNISYKWLCDYLPQVATMSPEEVADTLTSIGLETGSVEKVDSIKGGLEGLVVGRVETCEM 60 Query: 55 NPD---LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKI 109 +P+ L C +D G + +++VCGAPNV G + A G+ + E + ++ K+ Sbjct: 61 HPNSDHLHCTT--VDVGGEEPLKIVCGAPNVASGQHVIVATIGTTLYSGEESFVIKKSKL 118 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDC 168 RG ES GM+CSE E+ + DS+ IM LP A VG + Y L SD ++V +TPNR D Sbjct: 119 RGEESFGMICSEVEIGVGVDSSGIMVLPETAVVGTPAAKYFGLESDYCLEVDITPNRIDA 178 Query: 169 IGVRGIALDLVA-------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 G+A DL A KL + + P+ + D+ C + Sbjct: 179 TSHFGVARDLAAYLTRHGSPQEAKLPQTERVLSDLKDGKPIMVSVDVAPEE-CPRYQGVT 237 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRR 280 ++G+ N +P W+R+RL A+G+R IS LVDI+N+V + G P H FDA +++ + + + Sbjct: 238 MEGLTNGESPKWLRERLAAIGVRPISLLVDISNFVLHEVGQPLHFFDADKVAGGEIRIEK 297 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSI--AGIIGGKHAGCDDNTTDVLVEVALW 338 G + LD E L+ ++I D R + AGI GG +G D TT V +E A + Sbjct: 298 LPEGTQFTTLDGIERKLNGREIMIC-DARHNPLCMAGIFGGAESGVSDTTTRVFIESANF 356 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNI 397 + ++ ++ + + TDS +RFERG+D L+ V+L+ L GG ++ R + Sbjct: 357 NSTSVRKAARAHALNTDSSFRFERGLDPAATSYALRRAVALLQELAGGKVVGEVIDCRQM 416 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEK 456 + S + + G ++P E+ LRIL+ L +V + D + +++P +R DV + Sbjct: 417 PVEHPVCTLRRSRLTQTIGAEIPDEEVLRILQSLDITVQEVWPDGWLLNLPVYRIDVRRE 476 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR-YVKRVLASRAMMEVVNWSF 515 D++EE+LRIYG +++ PL + NLS + + Y +L S ++ V Sbjct: 477 VDVIEEVLRIYGYNEV-----PLKGY-IRANLSTRSKVDKDYHTELLLSEQLVGVGYQEI 530 Query: 516 ISKEQSV--LFGG-----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 +S + + G ++ + +LNP+S ++ +R +LL G L+A RN + A Sbjct: 531 LSNSLTAEKYYAGLETYPAEQLVHLLNPLSQELGVLRETLLFGGLEAIARNFNNKQQSCA 590 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF------------- 615 FE + Y + + + S G E S + D S ER F Sbjct: 591 FFEWGNCYRHK----------AMPQESLGDEASRDVLRDYS-ERAMFGLWLSGTYGGTNW 639 Query: 616 -------VDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 +D++ KAD +++ + L SL E G+ + + I + + + Sbjct: 640 LAPKEQPIDVYRLKADVENILCRLNIPLSSLHLEMGSNDIFSDFLAYQIPGKKKHTIVWM 699 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE P +L F +S P+ + D + + R K + VKRD A ++ Q Sbjct: 700 GEIKPELLRRFDISMPV--YYAEFDREFLMEAGREKALLAQEIVKYPIVKRDFALLLGQE 757 Query: 728 IPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + + + + + +L+ V +FDV+ GK+L EGKKS A+ +Q T D I Sbjct: 758 VTFAQVEAVARKAEQKLLKKVELFDVYTGKNLPEGKKSYAVSFYLQDATATLTDKQIEKT 817 Query: 787 MDRIVENVVKKTNAVLR 803 M R+ + K+ A LR Sbjct: 818 MQRVRTLLEKELGAELR 834 >gi|297182194|gb|ADI18365.1| phenylalanyl-tRNA synthetase beta subunit [uncultured actinobacterium HF4000_04C13] Length = 787 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 247/819 (30%), Positives = 388/819 (47%), Gaps = 47/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK LSWL + + +I D L+ +GL VE V L + +VL + +PD D Sbjct: 1 MKVLLSWLSEFAPFVGTPAEIGDQLSGLGLAVEDMVTVGAGLDGIVVARVLDLRPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +QV CGA N+ VG L +A GS +P N M + RK+RG S GM+ Sbjct: 61 RIQLVDVDAGDGEALQVCCGAFNMSVGDLVPFATLGSTMP-NGMQIGRRKLRGEWSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIALD 177 CS +E+ L D I+ L VG L++ LEL D + D+ + PNR D + V G+A D Sbjct: 120 CSPEEIGLGVDEDGILILEGGHAVGLALTEALELRPDVLFDLEVNPNRPDAMSVAGVARD 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L A + S E+ + ++ D LC F + + G+ +P WM R Sbjct: 180 LAARQGVPFTRPDPSPAEVGEAAAGRLAVEILDPDLCGRFVVRILDGISIGPSPRWMANR 239 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYD 296 L A+G+R I+ +VD++NYV L+ G PSH FD + ++ L VRRA GE I LD Sbjct: 240 LTALGMRPINNVVDVSNYVMLELGQPSHTFDLAAVAGAGLRVRRATPGETIQTLDGVVRT 299 Query: 297 LSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 LS + V+A + SIAGI+GG +TT V +E+A WDP++IA S + LG+ ++ Sbjct: 300 LSATDGVVADATDVAVSIAGIMGGSSTEISGSTTSVALEMAWWDPMSIASSARRLGLRSE 359 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + RFERG D + ++ L+ A + R T I S V + Sbjct: 360 ASARFERGADPEVADLAMRRFAELLAETGATLAPGVVDVRGNTPVREMIRVRTSRVNSML 419 Query: 416 GIDVPIEDSLRILERLGFSV--IGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G D+ + +L + F+ GE +V++PS+R D + D+VEE+ RI+G +I Sbjct: 420 GTDLDRDAIAGLLGSIQFTAEPAGEDGADLDVTIPSFRPDSSTEIDVVEEVARIHGYHRI 479 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P L + L+ Q+ R V+ + + EV+ F++ G + Sbjct: 480 ---PRTLPRSAITGGLTPYQADRRVVRTAMVGLGLDEVMPVPFLAPGDLERAGLDPNGVT 536 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYM 587 + NP+ A+ S MR SL PG+LK N I +FEV HVY PE ++++ Sbjct: 537 VTNPLVAEESVMRASLRPGILKTLAYNASHRIHGLGVFEVGHVYRRPAEVQPLPEEREHL 596 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A + +G V++F A ADAL V + + Sbjct: 597 AVALAGRDAGAA----------------VEVFSALADALDV-------RGHQLVAATTPG 633 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HP R+ I+ +V + GE P +L FG+ + E+ L+++ + + V Sbjct: 634 LHPTRTARIEFDGVVVG-HVGEVDPGVLTAFGVGERVGWLELDLETLLGLEHGGRPYRPV 692 Query: 708 VHLSSLHPVKR-DLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSV 765 S +P DLAF VD+ PA + + ++ L+ D+ +FDVF+G + +G++S+ Sbjct: 693 ----SRYPSSDIDLAFEVDETTPAADVGSCLRTAAGGLLVDLALFDVFRGAPVSDGRRSL 748 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 A + Q T D ++ R ++ V A LR Sbjct: 749 AFTLRFQAADRTLTDAEVAEARQRCIDAVQGTLPATLRG 787 >gi|303230847|ref|ZP_07317594.1| phenylalanine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] gi|302514607|gb|EFL56602.1| phenylalanine--tRNA ligase, beta subunit [Veillonella atypica ACS-049-V-Sch6] Length = 814 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 232/835 (27%), Positives = 403/835 (48%), Gaps = 53/835 (6%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPD 57 MK +L W+ ++ LD + +++ D LT G+ VE+V + + L K++ + ++PD Sbjct: 1 MKASLQWMNEYVPLDLNRPAQELADELTQAGIPVEEVLSMDPGLKKIYTGKIVEITKHPD 60 Query: 58 LD----CAILRI-DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 D C + + + G+ Q+V A NV VG + A S + + I K+RG+ Sbjct: 61 ADKLQVCQVQCLSEDGEEVTKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLRGV 119 Query: 113 ESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 S GM CS E +S D S I P P+G + + L L D + + LT NR+ Sbjct: 120 VSEGMFCSVAEFGISSDLVRPEESQGIYIFPEGTPIGLDIKEALMLDDTVYEFELTANRA 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 DC + G++ + K I + ESI + ++ LC F V V Sbjct: 180 DCFSMVGLSREFGIMTNQKALFPVIMVNENGESIEGKASVAIEAHDLCTRFTSRLVTNVT 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D ++D L RRA +GE Sbjct: 240 IEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDCVADHTLIARRAKAGE 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD E +L+ ++IA +AG++GG + D TT+VL E A+++ +I R Sbjct: 300 TLTTLDGNERELNESMLIIADTKGPIGVAGVMGGLTSEVTDKTTNVLFEAAVFNGPSIRR 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---R 402 + K LG+ +++ RFERGV+ + + L+ +C + + ++ +P R Sbjct: 360 TSKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPSCKVSVGVI-DVYPEPVEQR 418 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + F ++ G + + + IL +L F + D E VP+WR DV D+ EE Sbjct: 419 TVTFTAEQINDYLGTSIEKDRMVDILTKLEFGITESGDTIEALVPTWRDDVTGMPDIAEE 478 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 + RI D I P + ++ +++ T+ V LA + +++ +SF+ K+ Sbjct: 479 VARIVSYDNIA--PTIPVAILSSGGMTPKKALTKEVTHYLAHAGLSQIITFSFMHKDGLT 536 Query: 520 QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++VYE Sbjct: 537 NMMLPEGDGRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANVYE 596 Query: 578 ------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P ++ MA GI G + W+ R D +D K ++ Sbjct: 597 PKALPLTEVPH-ERPMACGIMMGKV----TEAAWNQAQ----RDTDFYDVKGVVDGLLAK 647 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L + + S+YHPG S + + + +GE HP ++ F LS + FE+ L Sbjct: 648 -LGLTQYDIQPSSESYYHPGVSAHYTVNG-VTIANYGELHPQVVKNFDLSGKVYMFEIDL 705 Query: 692 DSIP--ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVT 748 +++ I R ++ S RDLA + + +G +V +IK + ++ V+ Sbjct: 706 EAVLSIIVPPFRYQS-----FSKFPGTSRDLAIVAPVSVTSGDIVALIKEHGGEYLESVS 760 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++G+ + G +S+A + + ++ T D+DI + I++ + K N LR Sbjct: 761 IFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDIDGAIQAIIDALATK-NCKLR 814 >gi|260186598|ref|ZP_05764072.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis CPHL_A] gi|289447260|ref|ZP_06437004.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis CPHL_A] gi|289420218|gb|EFD17419.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis CPHL_A] Length = 831 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 256/864 (29%), Positives = 410/864 (47%), Gaps = 93/864 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFNGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLRG 831 >gi|260103132|ref|ZP_05753369.1| phenylalanyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] gi|260083042|gb|EEW67162.1| phenylalanyl-tRNA synthetase [Lactobacillus helveticus DSM 20075] gi|328464781|gb|EGF36096.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus helveticus MTCC 5463] Length = 804 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 230/812 (28%), Positives = 403/812 (49%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQDPHDLAEKITRTGVEIADVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIIALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ SD + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFSDSVVPEEFANGIYVFPEDADVKPGQDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDL--VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ + K++++ + + L++K D L F + + GV+ Sbjct: 180 EGSAYEVGAIVDQKPKVEDVVLKEDGPDWTDTLDVKVD---EKLAPKFYLRKLTGVKIQP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P+++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 297 LLNEKEVDLDPNDIVITDGEKPVMMAGVMGGLNSEITAETTDVILESAIFDPTLVRKAAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + KP + Sbjct: 357 RHANRTEASSRYEKGVNWDATENAINMAALLLRNDANATVDEGIIKATDTKRKPVVVKTT 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G ++ +D ++I +RLGF V + D V VP+ R D+ ADLVEE+ RIY Sbjct: 417 VSYINHVLGTEISAKDMIKIFDRLGFMVEHDGDDIAVHVPNRRWDIAIPADLVEEVGRIY 476 Query: 468 GVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D +KS +PL E S ++ R +K ++ + +ME +++S S E++V + Sbjct: 477 GYDNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYTK 533 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEG 583 ++L ++ P+++ S MR +L+ GL+ A N R A+FE VY++D T Sbjct: 534 DPKDLVKVQLPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRVYDHDGGTFNE 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 +++AA SG +++ + + VD + K ++ ++ + + +++ Sbjct: 594 HEHLAALY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFTAIGINPEKVVYKA 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL--DFFGLSNPICGFEVYLDS-IPISQK 699 HP R+ I + V G G + D + + G+E+ LD IP+ K Sbjct: 645 EGIEGMHPTRTAAIYIDKQYV-GMIGMIAHAVTFADKALRGSELYGYEINLDVIIPMLTK 703 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 T T ++RDL+ +V++ + + N+IK N + + + V DV++G + Sbjct: 704 GMTATPA----PKFPAIERDLSLLVNKDVTNQEVENVIKSNAGKYLTALKVIDVYEGSHI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 GKKS+A + KDT D + MD+I Sbjct: 760 EVGKKSLAYNLTFLNRKDTLTDKVVNNAMDKI 791 >gi|161507839|ref|YP_001577803.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus helveticus DPC 4571] gi|160348828|gb|ABX27502.1| Phenylalanyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 804 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 230/812 (28%), Positives = 403/812 (49%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQDPHDLAEKITRTGVEIADVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ SD + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFSDSVVPEEFANGIYVFPEDADVKPGQDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDL--VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ + K++++ + + L++K D L F + + GV+ Sbjct: 180 EGSAYEVGAIVDQKPKVEDVVLKEDGPDWTDTLDVKVD---EKLAPKFYLRKLTGVKIQP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P+++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 297 LLNEKEVDLDPNDIVITDGEKPVMMAGVMGGLNSEITAETTDVILESAIFDPTLVRKAAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + KP + Sbjct: 357 RHANRTEASSRYEKGVNWDATENAINMAALLLRNDANATVDEGIIKATDTKRKPVVVKTT 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G ++ +D ++I +RLGF V + D V VP+ R D+ ADLVEE+ RIY Sbjct: 417 VSYINHVLGTEISAKDMIKIFDRLGFMVEHDGDDIAVHVPNRRWDIAIPADLVEEVGRIY 476 Query: 468 GVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D +KS +PL E S ++ R +K ++ + +ME +++S S E++V + Sbjct: 477 GYDNLKSTQPL---LAETHGGYSEKEEMMRRMKVIVEGQGLMEAISYSLTSPEKAVRYTK 533 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEG 583 ++L ++ P+++ S MR +L+ GL+ A N R A+FE VY++D T Sbjct: 534 DPKDLVKVQMPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRVYDHDGGTFNE 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 +++AA SG +++ + + VD + K ++ ++ + + +++ Sbjct: 594 HEHLAALY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFTAIGINPEKVVYKA 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL--DFFGLSNPICGFEVYLDS-IPISQK 699 HP R+ I + V G G + D + + G+E+ LD IP+ K Sbjct: 645 EGIEGMHPTRTAAIYIDKQYV-GMIGMIAHAVTFADKALRGSELYGYEINLDVIIPMLTK 703 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 T T ++RDL+ +V++ + + N+IK N + + + V DV++G + Sbjct: 704 GMTATPA----PKFPAIERDLSLLVNKDVTNQEVENVIKSNAGKYLTALKVIDVYEGSHI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 GKKS+A + KDT D + MD+I Sbjct: 760 EVGKKSLAYNLTFLNRKDTLTDKVVNNAMDKI 791 >gi|16803262|ref|NP_464747.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes EGD-e] gi|47095064|ref|ZP_00232677.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|224502483|ref|ZP_03670790.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL R2-561] gi|254898617|ref|ZP_05258541.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes J0161] gi|254911894|ref|ZP_05261906.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes J2818] gi|254936219|ref|ZP_05267916.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes F6900] gi|30316257|sp|Q8Y7Q1|SYFB_LISMO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|16410638|emb|CAC99300.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes EGD-e] gi|47016682|gb|EAL07602.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 1/2a F6854] gi|258608809|gb|EEW21417.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes F6900] gi|293589852|gb|EFF98186.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes J2818] Length = 802 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 231/826 (27%), Positives = 415/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVNAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + ++G+A ++ A + K + P SE E I ++++ + +A+ V+ + Sbjct: 177 LSMKGVAHEVGA--IIHQKPAQPTEPDVSEKGKAEDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLTEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 ++ AG+ G+ I W ++ + VD F K ++ L + Sbjct: 592 LPIEQEHLAGLITGNWHIAD----W----QKTPKPVDFFVLKGIVEGLVNKLGIKSELHW 643 Query: 641 ESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + HPGR+ ++ EI GY G HP + + L FE+ + ++ Sbjct: 644 KQTEKEELHPGRTASLVLEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ + +IK + +L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGGKLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLNAIIR 802 >gi|31792837|ref|NP_855330.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium bovis AF2122/97] gi|121637558|ref|YP_977781.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224990033|ref|YP_002644720.1| phenylalanyl-tRNA synthetase, subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|260204919|ref|ZP_05772410.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis K85] gi|289574319|ref|ZP_06454546.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis K85] gi|41018299|sp|Q7VEV3|SYFB_MYCBO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|31618427|emb|CAD96345.1| Phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium bovis AF2122/97] gi|121493205|emb|CAL71676.1| Phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224773146|dbj|BAH25952.1| phenylalanyl-tRNA synthetase, subunit beta [Mycobacterium bovis BCG str. Tokyo 172] gi|289538750|gb|EFD43328.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis K85] Length = 831 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 256/864 (29%), Positives = 410/864 (47%), Gaps = 93/864 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPVWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLRG 831 >gi|194333648|ref|YP_002015508.1| phenylalanyl-tRNA synthetase subunit beta [Prosthecochloris aestuarii DSM 271] gi|194311466|gb|ACF45861.1| phenylalanyl-tRNA synthetase, beta subunit [Prosthecochloris aestuarii DSM 271] Length = 803 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 243/842 (28%), Positives = 408/842 (48%), Gaps = 80/842 (9%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPDL 58 MK +++WL+D + + ++ + D LT GLEVE V + +V ++ V+ +PD Sbjct: 1 MKISINWLQDFIPSFSPNIASLVDQLTFSGLEVEDVASPTLPDERVVVGLVEDVQPHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIES 114 D + R+D G + +Q+VCGA NV G+ A GS + + ++ K+RG S Sbjct: 61 DRLKVCRVDVGSDEPLQIVCGASNVAQGMKVPVATIGSRLTTASGESFVIKKSKLRGQRS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+ EL L DD + IM L G L+ YL+ SD I+D+++TPNR D + GI Sbjct: 121 FGMICAADELGLGDDHSGIMLLDSSWQTGKPLASYLQ-SDTILDIAVTPNRPDVLSHLGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFD---------LDDSSLCKGFAMCCVKGV 225 A ++ AG+ L ++P +FD +DD C + ++ V Sbjct: 180 AREI--AGIRGL------------ALPKAAEFDFNRSGTIVQIDDPESCPYYTAVVIRNV 225 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 R +P+W++ RL+ +G+RS + +VDITNY+ G P H FD S+I + V R+ G Sbjct: 226 RVAESPSWLKDRLEGIGVRSKNNVVDITNYILHALGQPLHAFDLSKIHEERVVVRSDIGS 285 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + ++ + L P VI + ++AG++GG + TTD+L+E A +DP + R Sbjct: 286 EFRVINKESVVLQPGMPVICDSHKPVAVAGVMGGDDSSVSGATTDILLESAYFDPSAVRR 345 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + LG+ TDS YRFERG D + K V +IL LCGG A ++ P + Sbjct: 346 SARLLGLSTDSSYRFERGTDPGNVSYASKVAVRMILDLCGGEIIAAEEAGSLPSPPPDVA 405 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV--SVPSWRQDVEEKADLVEEI 463 L G + E + +LE +GF V D + SVPS+R DV ++ DL+EE+ Sbjct: 406 LRPLRANALLGTAIAEEKMISMLEHIGFRV-SSRDGASIIFSVPSYRVDVLQEIDLIEEV 464 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R+ G + I S ++ R S + Y++ V+ S EV+ ++++++ L Sbjct: 465 ARLEGYNNIASSEKMVSSYPQAR--SFPEYFPDYLRTVMISLQFREVLTNPLMTRQEAQL 522 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---DT 580 F R + LNPIS + +R SL+P +LK N+ D FE++ + + D Sbjct: 523 F--SSRCVAALNPISEGLEVLRPSLVPAMLKVVAHNIRHGNRDLRFFEIARAFRSGALDA 580 Query: 581 P--------EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 P E +Y+ + S + WS+ +E+ VD+FD K ++ Sbjct: 581 PSTDPLMGFEEHEYLTFVLTGSRSPLN-----WSESAEK----VDIFDMKGGVEMLLRKL 631 Query: 633 VSLD--SLRFESGAP-----SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 LD SL + W + +++ G +LD F + P Sbjct: 632 NLLDKSSLNIYNDTTLSIDIDWMDGDKPCVLRA------GTLTSAEQALLDAFDIDQP-- 683 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRL 743 V+ I + ++ +++V + S S +P V+RDL+FI+ + L++ ++ D + Sbjct: 684 ---VFFAEIDLRVLEQCFSREVSYESPSRYPVVQRDLSFILPSVVTVKELLDCVRRSDDM 740 Query: 744 IDDVTVFDVFQGKSLGEG--KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 I VFDVF+ + G+G ++SVA+ + + T ++D I ++ +V N + AV Sbjct: 741 IRSADVFDVFE-RETGDGSTERSVAVSIAMVDPSGTLKEDTISSIIQVVVGNAESELGAV 799 Query: 802 LR 803 +R Sbjct: 800 IR 801 >gi|116070579|ref|ZP_01467848.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] gi|116065984|gb|EAU71741.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. BL107] Length = 807 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 234/838 (27%), Positives = 420/838 (50%), Gaps = 65/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M +LSWLK+ + D +++ + + L+ G EVE VD+ A S +V VL+ +++P+ D Sbjct: 1 MLVSLSWLKELVQVDDAVDDLAERLSMAGFEVENVDDLSAQSKGVVVGHVLTRDKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + +Q+VCGA NVR G+ A G+ +P ++ + ++RG+ S GM+ Sbjct: 61 KLSVCRVDIGAEEPVQIVCGAANVRAGIYVPVATVGAVLPAVDLTIKAGELRGVTSDGMI 120 Query: 119 CSEKELMLSDDSASIM-------ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL L+ DS+ I E+P PVG ++ L D ++++++T NR D + + Sbjct: 121 CSLSELGLTADSSGIAILEDSTEEVP---PVGTPVAALFGLDDTVLELAITANRPDGMSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNV 229 GIA ++ A L ++S P L+ +++ +LD S + + CV+GVR + Sbjct: 178 VGIAREVAA-----LTNASLSLPSLNHTPDQEQLQTELDGSY----YGIACVEGVRGDQE 228 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRR 280 +P W++QRL G+ +++A+VDITN V L++G P H FDA + + VR Sbjct: 229 SPQWIQQRLSRAGINAVNAVVDITNLVMLEQGQPLHAFDAEALESLTGQSVDAASFAVRP 288 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 A E + LD+Q L P V+ R +IAG++G + + D+TT + +E A++ P Sbjct: 289 AKDQETFIGLDDQSLCLDPRVQVVTCHDRAIAIAGVMGSRDSAVSDSTTRIWLESAMFSP 348 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 I + +S + +G+ TD+ RFE+G+ + + + + L+ + + Sbjct: 349 IRVRQSSRAVGLRTDASSRFEKGLPPEVTLACSQRAIDLLSDQFACRVNGRWVGGEGPKT 408 Query: 401 PRKIVFMNSEVKRLSG-IDV---PIEDSLRILERLGFSVIGEYDKFE-----VSVPSWRQ 451 P + + +L G ID P++ + +E+ ++ E + + ++ PS RQ Sbjct: 409 PVPLQLRRDALHQLLGPIDTDSSPVDLADHTIEQCLTALGCEMESTDEGWAVMTPPSRRQ 468 Query: 452 DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ + DL+EE+ R+ G D+ S P P+ +L+ +Q R ++R+ S + E+ Sbjct: 469 DLHREVDLIEEVARLVGFDKFGSHLPDPVA----PGSLTPRQQAERRLRRLFCSAGLQEI 524 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + G + I NP+ A+ S++RT+L L+ RN+ ++A +IF Sbjct: 525 TTLSLVGSSD------GDGRIAISNPLLAETSHLRTNLWEEHLQICVRNLKASMAGCSIF 578 Query: 571 EVSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 EV + Y +PE Q + +G+ I G RL + + + + ++A+ LS Sbjct: 579 EVGNTYSG-SPESVEQSGVVSGV------ICGDRRLERWSTSGKYQAPNYYEARG-VLSR 630 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + LD HPGR+ + LG FG+ HP + D L FE Sbjct: 631 VMGAMQLDLSDRPLTNDERLHPGRAATLVLEGR-PLGCFGQLHPALADDLSLPECTYLFE 689 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDD 746 + LD + + + + + P +RDLA +VD++ AG L+ I+ + L++ Sbjct: 690 LDLDRLLDAATRSNRWTPIYKSFPTVPASERDLAVVVDRNSRAGDLIQAIRKAGKPLLEH 749 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V + D F+G LG+ K S A ++ + +T DD I+ + +++ + K+ A LRS Sbjct: 750 VELIDRFEGDQLGDQKVSQAFRLRYRSPNETLTDDKIQPVHEKVRAALSKQFKAELRS 807 >gi|15608788|ref|NP_216166.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis H37Rv] gi|15841106|ref|NP_336143.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis CDC1551] gi|148661446|ref|YP_001282969.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis H37Ra] gi|167968396|ref|ZP_02550673.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis H37Ra] gi|215404048|ref|ZP_03416229.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis 02_1987] gi|215411296|ref|ZP_03420104.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis 94_M4241A] gi|253799310|ref|YP_003032311.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis KZN 1435] gi|289554575|ref|ZP_06443785.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis KZN 605] gi|289745912|ref|ZP_06505290.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis 02_1987] gi|294996599|ref|ZP_06802290.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis 210] gi|297634203|ref|ZP_06951983.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis KZN 4207] gi|297731190|ref|ZP_06960308.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis KZN R506] gi|298525148|ref|ZP_07012557.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium tuberculosis 94_M4241A] gi|313658522|ref|ZP_07815402.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis KZN V2475] gi|3122893|sp|P94985|SYFB_MYCTU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1839002|emb|CAB06644.1| Probable phenylalanyl-tRNA synthetase, beta chain PheT [Mycobacterium tuberculosis H37Rv] gi|13881322|gb|AAK45957.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium tuberculosis CDC1551] gi|148505598|gb|ABQ73407.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis H37Ra] gi|253320813|gb|ACT25416.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis KZN 1435] gi|289439207|gb|EFD21700.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis KZN 605] gi|289686440|gb|EFD53928.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis 02_1987] gi|298494942|gb|EFI30236.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium tuberculosis 94_M4241A] gi|323719911|gb|EGB29024.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis CDC1551A] gi|326903265|gb|EGE50198.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis W-148] gi|328459061|gb|AEB04484.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis KZN 4207] Length = 831 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 256/863 (29%), Positives = 410/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|324998024|ref|ZP_08119136.1| phenylalanyl-tRNA synthetase subunit beta [Pseudonocardia sp. P1] Length = 833 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 268/867 (30%), Positives = 405/867 (46%), Gaps = 100/867 (11%) Query: 3 FTLSWLKDHLDT---DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE----- 53 + SWL H+D S E+I + +GLEVE + +S P T+ +VL + Sbjct: 1 MSASWLARHVDPAALPASPEEIGEAFVRVGLEVEDIHPAPEISGPVTVARVLEISELTGF 60 Query: 54 RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + P C R+ + QVVCGA N VG L V PG+ +P I + R G Sbjct: 61 KKPIRYC---RVGFEGDRSRQVVCGATNFTVGDLVVVTEPGAVLPGGFAIAS-RTTYGHV 116 Query: 114 STGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+ S KEL L D A I+ LP A G L L++P++++++TP+R C VR Sbjct: 117 SDGMIASAKELGLGADHAGILVLPPGTAEPGDDAVTVLGLAEPVVELAVTPDRGYCFAVR 176 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A +L A LG + + P ++P + D+ C F + V GV Sbjct: 177 GLAREL-ATSLGA----DFTDPAGRVTVPDTGGDAWPVRIADTEGCPRFVVRRVDGVDPA 231 Query: 229 VA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 A P WM++ L + G+R IS +VD+TN+V LD G P H +DA R+S + VRRA +GEK+ Sbjct: 232 AASPWWMQRALLSAGMRPISLIVDVTNFVMLDLGQPLHAYDAVRVSGAIEVRRAAAGEKL 291 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG-------CDDNTTDVLVEVALWDP 340 LD Q L PD+++I D +AG++GG D DVL+E A + P Sbjct: 292 ETLDGQSRTLDPDDLLITDDSGPIGLAGVMGGASTEIPALADLADGARVDVLIEAAHFAP 351 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITY 399 IAR+ + + +++ RFER VD + PV + L++ L GGT +D Sbjct: 352 QVIARAARRHKLPSEASRRFERVVD-PALPPVAAERAAQLLVELGGGTLADGRTDEGGIP 410 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGEYDKFEV--SVPSWRQDVE 454 + S R++G+ P ++R L ++G +V G + V + P+WR D+ Sbjct: 411 AVPSVRMPLSMPDRVAGVAYPRGATVRRLGQVGCAVDLDTGTDGQGVVVATPPTWRPDLR 470 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 ADLVEE+LR+ G D I SE L R L++ Q R R V R LA +EV+ + Sbjct: 471 MAADLVEEVLRLEGYDTIPSE---LPTAPAGRGLTVSQLRRRAVSRALAEAGHVEVLPFP 527 Query: 515 FISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F+S G +R + + NP+ A+ S + T+LLPGLL RN R D A+ Sbjct: 528 FVSDSVWDDLGLDADDERRRTVAVTNPLDAERSRLTTTLLPGLLDMLVRNRSRGTEDLAL 587 Query: 570 FEVSHVYEND--TPE-----------GQKYMA----------------AGIRKGSSGIEG 600 + ++ V + TPE +Y A AG R+ G G Sbjct: 588 YAIAQVVQPQEITPEMPDPAVTGRPSDDEYAAIRAALPAQPVHVGVVLAGNRE-PRGWWG 646 Query: 601 SGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIK 657 GR W D E A L+ V L R E AP +HPGR I+ Sbjct: 647 RGRPAAWEDAVE------------AARLTGAAAGVELRPRRAER-AP--WHPGRCAEIVV 691 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 V+G+ GE HP +++ GL E+ LD++P+ + V +S+ PV Sbjct: 692 AGTGTVVGHAGELHPKVVEALGLPARTAAAEIDLDAVPLREN-----LPVPLVSAFPPVA 746 Query: 718 RDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 D+A + D+ +P+ L + + L++ V +FDV+ G +G GK+S+A + ++ Sbjct: 747 VDVALVADESVPSADLADALTAGAGELLESVRLFDVYTGDQVGAGKRSLAFSLRLRAGDR 806 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T ++ D V + A LR Sbjct: 807 TLTSEEANTARDAAVAEATSRYGAALR 833 >gi|258404186|ref|YP_003196928.1| phenylalanyl-tRNA synthetase subunit beta [Desulfohalobium retbaense DSM 5692] gi|257796413|gb|ACV67350.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfohalobium retbaense DSM 5692] Length = 798 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 236/814 (28%), Positives = 396/814 (48%), Gaps = 39/814 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M +L WL + VS+E + LT +GLEVE++ N A L + VL+ E +PD D Sbjct: 1 MLLSLKWLHELTPFTVSVEDLAHKLTMLGLEVEEIQNPFAELESVVVGHVLTCEPHPDAD 60 Query: 60 C-AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +VCGAPNV G AP G+ +P + + KIRG S GM+ Sbjct: 61 TLSVCSVDLGGGVQPTIVCGAPNVAAGQKVAVAPVGTTLP-GDFKIKKAKIRGQRSEGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSEKEL L + + IM L D G L + L+L + D+ +TPNR+DC+ V G+A ++ Sbjct: 120 CSEKELGLGEGADGIMVLDADLEPGTSLIEALDLETTVFDIGITPNRADCLSVLGVAREV 179 Query: 179 VAAGLGKLK-EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AA L + P ES L+I ++ D LC + ++ + +P WMR R Sbjct: 180 AAAYDLPLHIPQGDTTPYEGES-SLDIDLEISDGRLCPLYQAMGIEQITLKPSPAWMRYR 238 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L AVG R I+ +VDITNYV L++G P H FD R+ D + V A G+ I LD QE Sbjct: 239 LLAVGQRPINNIVDITNYVLLEQGQPLHAFDRDRLEGDRIQVAPAEEGQTITTLDGQERA 298 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L ++I + ++AG++GG ++ ++ VL+E A++ P I ++ + L + ++S Sbjct: 299 LQAGELLIWDAAKPVALAGVMGGANSEMQTGSSRVLLECAVFHPGTIRKTARRLALSSES 358 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLS 415 YRFERGVD G + +L+ G + + + ++P ++ F KR Sbjct: 359 SYRFERGVDQPGSSRAMYRAAALMAEYGAGRIVKGVASSEPLPWEPVRLPFRPERTKRFL 418 Query: 416 GIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK- 473 +DV + L LG V + ++V VPS+R D+E + DL EEI R+YG+DQI Sbjct: 419 ALDVDDSFCFQTLTGLGCVVETADPSVWQVDVPSYRLDLEREVDLTEEIARVYGMDQIPA 478 Query: 474 -----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 S+ L + D LQQ +K + + E VN+SF+ G + Sbjct: 479 SLPRVSKSLESDALRDTHFDFLQQ-----LKTWASGLGLNEAVNYSFVGANDLNCLGLPE 533 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + L + NP+SA+ MR++L PGLL+ N+ + +FE++H + D P + Sbjct: 534 NDRLFVCNPLSAEQDTMRSALAPGLLQTLRHNLGQGNTTLRLFEIAHTFHAD-PHSET-T 591 Query: 588 AAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 A I + + + G + W EE +D D K ++E V+ R E Sbjct: 592 AEEIPRLALMLTGRRHEQGWPYPDEE----LDYTDIKG----LVEHLVAWLGQRPEFTLQ 643 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 + + + E +G G + + + + + E+ IP+ + + Sbjct: 644 EGHSYLEPCVRVSVGEQEVGIIGRVNDEVARAYRAKSDVWLAEL---DIPVLESFAADHE 700 Query: 706 KVVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKK 763 V L PV RD+ IV + ++++ +++ ++L+ D+ + D++Q + E K Sbjct: 701 VVFRDLPKFPPVHRDMTVIVPPGVKLQSILDTVRSAQEQLLQDMLLVDIYQPEDSDEQK- 759 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +++ + K T +D ++ + R+ E ++ + Sbjct: 760 -FTLRLTYRHPKKTLKDKEVDKVHTRLGEYLLSQ 792 >gi|308376781|ref|ZP_07668347.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu008] gi|308350037|gb|EFP38888.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu008] Length = 832 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 256/863 (29%), Positives = 410/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 2 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 61 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 62 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 118 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 178 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 232 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 233 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 293 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 352 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 353 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 412 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 413 DDWSPPPIRMGVDVPDRVAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 472 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 473 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 529 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 530 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 589 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 590 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 648 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 649 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 693 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 694 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 748 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 749 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 808 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 809 DDASAARDAAVQSAAERVGAVLR 831 >gi|182414174|ref|YP_001819240.1| phenylalanyl-tRNA synthetase, beta subunit [Opitutus terrae PB90-1] gi|177841388|gb|ACB75640.1| phenylalanyl-tRNA synthetase, beta subunit [Opitutus terrae PB90-1] Length = 818 Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 245/851 (28%), Positives = 407/851 (47%), Gaps = 82/851 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNPDL 58 MK +L+WLKD++ D S+++IC +T +G EVE+V + A LS + ++L+ ++P+ Sbjct: 1 MKISLNWLKDYVQLDASVDEICRAITFLGFEVEQVLHTGAPQLSNVVVGEILTRAKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D ++ +D G ++ +VCGAPN G A PG+ +P N + KIRG S G Sbjct: 61 DKLSVCTVDVGPAGGVKTIVCGAPNCDAGRRVPVALPGAVLP-GNFTIKQSKIRGQSSDG 119 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 MMC+ EL L + A ++ L +G ++D L D + DV +TPNR DC GIA Sbjct: 120 MMCAPDELGLGSEHAGLLILDGQPALGTPINDVLPPGDVVFDVEITPNRPDCQSHLGIAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKF--DLDDS---------------SLCKGFAM 219 +L A PL I + KF DL D+ C + Sbjct: 180 ELSAW---------FKLPL----IYPQEKFRGDLTDAGSRPELLRNVSVTAPQACPLYTA 226 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 + G++ +P WM++RL AVGLR I+ +VD+ NYV L+ G P H FDA ++ + + V Sbjct: 227 HVITGIKIGPSPEWMQRRLTAVGLRPINNVVDVGNYVMLETGQPLHAFDARKLGGNEIIV 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A GEKI+ LD +E L+ +VIA + IAGI+GG+++G D+TTD+++E A++ Sbjct: 287 RPAADGEKIVTLDGKERTLNHRMLVIADAHKPVVIAGIMGGENSGVSDDTTDLVLECAIF 346 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARN 396 + +I + + LG+ +DS YR+ERGVD + + LI+ GG + Sbjct: 347 NRQSIRWTSRQLGLSSDSSYRYERGVDPHSSLEAAWRAIDLIIETAGGKVVGPAFKVGGE 406 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY------DKFEVSVPSWR 450 ++ R+IV + + G D+P + E L +V+ E + V++PSWR Sbjct: 407 APWQ-REIVVTHDFICEQVGFDIPAAEMRASFEALELTVVREEPTERRGPAWTVNIPSWR 465 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAM 507 D++ DLVEE+LR+YG ++I P ++V + R+ +RV L Sbjct: 466 DDLDRPIDLVEEVLRLYGTEKI-----PASRVVAPSLVGDDAPVVRFNRRVTDYLVGHDF 520 Query: 508 MEVVNWSF-ISKE-QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E VN++ +KE ++ + EL + NP D S++R +L+ GLL N R + Sbjct: 521 HECVNYTLRPAKELKTWVSETAAAELALANPFVEDQSHLRPTLIMGLLDTLKLNQARGVP 580 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 + E V+ GQ + A + G E + R W + D + K Sbjct: 581 VSRLCETGRVFIERN--GQNFECAAV--GFVIAEDAERRWLKREP-----ADFYTTKHHV 631 Query: 626 LSVIEPFVSLDSLRFE----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +V +D R + +G+ + G S FG + ++ G+ Sbjct: 632 AAVAA-AAGIDLARHQPVPVTGSFCGWQEGHSACAGQMEHGWTARFGLLNLAMVHALGIE 690 Query: 682 NPICG--FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 + F + + I + +R + S L RDLA +VD+ PA + + Sbjct: 691 GKVYAGIFAILPERISAASSRR----RYADFSLLPAALRDLAVVVDESTPAEEVRQQLVQ 746 Query: 740 VDRL-------IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + R ++ + +FDV++G L EGKKS+A ++ + + T DD++ +I + Sbjct: 747 LGRKATGSAFGVEQIEIFDVYRGAGLPEGKKSIAFSLVFRAAERTLTDDEVNGAFQKIQD 806 Query: 793 NVVKKTNAVLR 803 ++K + +R Sbjct: 807 ELLKNASWQIR 817 >gi|317969857|ref|ZP_07971247.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. CB0205] Length = 820 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 231/842 (27%), Positives = 420/842 (49%), Gaps = 62/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 M+ +L WL++ + D++ + + + L+ G EVE++ + A + +V + +R P D Sbjct: 1 MQVSLQWLRELVACDLAPDVLAEKLSIAGFEVEEITDLAARAAGVVVGFVE-QREPHPDA 59 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ + G +Q+VCGA NVR G+ A G+ +P ++ + ++RG+ S+GM Sbjct: 60 NKLSVCTVSVGAEAPLQIVCGAKNVRAGIHVAVATVGAYLPAVDLKIKSAELRGVASSGM 119 Query: 118 MCSEKELMLSDDSASIMEL--------PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 +CS EL L+D S I+ L I +PVG L D ++++++T NR D + Sbjct: 120 ICSLSELGLADSSDGIVVLEEALGSVPAIGSPVG----PLFGLDDQVLELAITANRPDGL 175 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPL--EIKFDLDDSSLCKGFAMCCVKGVRN 227 + GIA ++ A L + + +SSE++P+ +++ ++D L F++ + G++ Sbjct: 176 SMLGIAREVAALTGATLNLPSATPVVSSEALPVGADVQDRIEDGGL---FSLTALSGLKV 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTV 278 +P W++ RL+ GLR I+ +VDITN V L++G P H FDA R++ + + + Sbjct: 233 GPSPRWLQSRLERAGLRPINNVVDITNLVMLEQGQPLHAFDADRLAQLSEGQLDPAAIDL 292 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R GE LD ++ LS D V++ ++AG++GG + + TT + +E A++ Sbjct: 293 RAGRPGEAFTTLDGSDHSLSEDAWVVSYADHAIALAGVMGGDASAVQEKTTSIWLEAAMF 352 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 P + +S +++G+ TD+ RFE+G+ L+ + V+L+ +CG + + + Sbjct: 353 APQTVRKSARSVGLRTDASSRFEKGLPLEVTLSAADRAVALLQEICGAQLDGRWLHQRVE 412 Query: 399 -YKP----RKIVFMN--SEVKRLSGIDVPIEDS--LRILERLGFSVIGEYDKFEVSVPSW 449 +P R+ N V G ++ +ED+ RILE LG S+ + + V VP Sbjct: 413 GARPPLELRRDALHNLLGPVVTADGEEIDLEDAEIERILEALGCSLQAGEEGWLVQVPPA 472 Query: 450 R-QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 R D++ + DL+EE+ R+ G D+ S P P+ L+ Q R ++R+LAS + Sbjct: 473 RAMDLQREVDLIEEVARLVGYDRFASHLPDPIA----PGGLTPLQEAERRLRRLLASAGL 528 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 EV + S E R + + NP+ AD S++R SL+ LL A RN+ Sbjct: 529 QEVCSLSLGPAEVDRPGADPSRRVALANPLLADYSHLRDSLVDDLLSAAQRNLKAGRGGI 588 Query: 568 AIFEVSHVYE---NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE+ +V++ +P+ Q AG+ GS E LWS + + D F A+ Sbjct: 589 WAFEIGNVFDAKAQGSPQSQHL--AGVICGSRQAE----LWSQSGKPQA--PDYFSARGV 640 Query: 625 ALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 S + + L+ R S P HPGR+ I LGYFG+ HP + + F L Sbjct: 641 LQSALAALKLPLEDRRL-SDHP-LLHPGRAAQIVVEGR-PLGYFGQIHPALAEQFDLPAT 697 Query: 684 ICGFEVYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR 742 F++ + ++ + +R + + +++ +RDLA +V + L+N I+ + Sbjct: 698 TYLFQLEVVALLSAATRRNRWQPSFAPFATVPASERDLALVVPTDTASAQLLNAIRKAGK 757 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 L++ + D + G+ + +G S A ++ + K T +D ++ ++I + K+ A Sbjct: 758 PLLEQAELVDRYDGEQVAQGSCSQAFRLRYRDPKRTLKDTEVDEAHEKIRAALEKQFGAQ 817 Query: 802 LR 803 LR Sbjct: 818 LR 819 >gi|189347129|ref|YP_001943658.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobium limicola DSM 245] gi|189341276|gb|ACD90679.1| phenylalanyl-tRNA synthetase, beta subunit [Chlorobium limicola DSM 245] Length = 804 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 245/838 (29%), Positives = 405/838 (48%), Gaps = 71/838 (8%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +++WLK + + + + + LT +GLEVE V L +V ++ V+R+PD Sbjct: 1 MKISVNWLKKFIPSFSPDIPALVEKLTFLGLEVEDVLGCRQLDERIVVGRIEEVDRHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMI-VNVRKIRGIES 114 D + R++TG+ + +Q+VCGAPNV G++ A G+ + P+ + KIRG++S Sbjct: 61 DRLTVCRVNTGQGELLQIVCGAPNVASGMVVPVAMVGAKLGQPDGEAFSIKKSKIRGVQS 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+ EL LS D +M L +P+G ++ L+ +D I+D+++TPNR D + GI Sbjct: 121 FGMICAADELGLSGDHTGVMVLDPASPLGAPVASLLD-TDAILDIAVTPNRPDVLSHLGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A +L + E ++ + + +EI+ D C ++ ++GV+ +P W+ Sbjct: 180 ARELALPEDIVIPERHM-IDFAQTADLVEIR----DREACPYYSAVAIRGVQVGESPEWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 RQ L+++GL+ + +VDITNY+ G P H FD +++ V R+ A+ + Sbjct: 235 RQCLESIGLKPKNNIVDITNYILHSLGQPLHAFDLGKLAGGRVVVRSDVSASFTAITQET 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + P VI + +IAG++GG + TTD+L+E A + P + +S K GI + Sbjct: 295 CTVGPGMPVICDSEKPAAIAGVMGGLDSAVTAGTTDILLESAYFTPSFVRKSAKKAGISS 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 DS YRFERGVD + + VSLIL L GG +I A+ +P +++ + +R+ Sbjct: 355 DSSYRFERGVDPLNVKRAAECAVSLILELAGG---EIAAAQECGKEPSELLRLTLRPQRV 411 Query: 415 S---GIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + G + E IL +GF + E VPS+R DV + DLVEE+ R+YG Sbjct: 412 NAMLGSSIEPETMSSILAGIGFVHTATTAEGYMEFLVPSYRVDVTSEIDLVEEVARVYGY 471 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D I+ +T + R + + Y++ +L EV+ I + ++ LF Q Sbjct: 472 DNIQPSVQMVTTYPESRRVP--EYFPDYLRSLLIGLDFREVLTNPLIRRSEAALF--DQC 527 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMA 588 + +LNPIS + +R SL+P LK N+ D +FEV+ + D EG + Sbjct: 528 LISVLNPISEGLEVLRPSLVPAFLKVIAHNIRYGNKDLKLFEVARGFIGKDLSEGNELPL 587 Query: 589 AGIRKGSS---GIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD------- 636 + I GS RLW+ E+ D +D ++E LD Sbjct: 588 EAFSEREYLVMAITGSRNPRLWNQPMEK----TDFYDMTGSVGMLLEKLNLLDKSSLIAY 643 Query: 637 ---------SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 L G P Y R+G+++ VLG F D G Sbjct: 644 NENTVGIELELTGGQGKPRRY---RAGVVQLIDAAVLGAF--------DIVG-------- 684 Query: 688 EVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLID 745 EVY+ + + + + + S V+RDL+FI+ +P +LV++++ D LI Sbjct: 685 EVYIAELDTAVLQDCFASSITYEPPSRFPAVQRDLSFILPLEVPVQSLVDVVRASDSLIR 744 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VTVFD F G +SVA+ + I + T D+ I ++++ + KK AV+R Sbjct: 745 AVTVFDHFVRGDQEGGARSVALSLDIADYEGTLLDERINDILEKAGSSAGKKLGAVIR 802 >gi|240168035|ref|ZP_04746694.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium kansasii ATCC 12478] Length = 829 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 250/862 (29%), Positives = 418/862 (48%), Gaps = 93/862 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV ++ TL IG EVE+V + P T+ +V ++E Sbjct: 1 MRVPYSWLREVVSAGAPGWDVPAGELEQTLVRIGHEVEEVTALGPVDGPLTMGRVAAIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C + D G E ++VCGA N VG L V A PG+ +P + RK Sbjct: 61 LTGFKKPIRACLV---DLGDGAEREIVCGATNFMVGDLVVVALPGTTLP-GGFTITARKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L+ D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRTSAGMICSAAELALAADHSGILVLPPGTAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + VRG+A ++ A L + ++ + P+ +E+ PL ++ + + + FA+ V G+ Sbjct: 177 MSVRGLAREIACAYDLDFVDPADVPALPVEAEAWPLTVQAE----TGVRRFALRPVTGID 232 Query: 227 NNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 A P W+++RL G+R+ S VD+TNYV L+ G+P H D +RI+ L VR A S E Sbjct: 233 PAAASPWWLQRRLLLCGIRATSPAVDVTNYVMLEFGHPMHAHDRNRITGSLGVRFARSCE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LDN E L P +V+I D +I G++G ++TDVL+E A+WDP ++R Sbjct: 293 TVVTLDNIERRLEPADVLIVDDVTTAAIGGVMGAASTEVRADSTDVLLEAAIWDPAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-------ARNIT 398 + + L + +++ R+ER VD + L +L+ + GG + + Sbjct: 353 TQRRLHLPSEAARRYERAVDPAISVAALDRCAALLADIAGGVVVPALTDWRGEPPVDDWS 412 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKA 457 P +I + R +G+ + R L ++G V + D EV PSWR D+ + A Sbjct: 413 MPPIRIAVDLPD--RFAGVSYAPGTAARRLTQIGAQVAEDGPDVLEVRPPSWRPDLLQPA 470 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DLVEE++R+ G++ I S L R L+ Q R R + + LA +EV+ F+ Sbjct: 471 DLVEEVMRLEGLEVIPSV---LPSAPAGRGLTATQRRRRAIGKSLALSGYVEVLPTPFLP 527 Query: 518 KEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 L+G + ++NP+ AD + T+LLP LL+A GRNV R + D A+F + Sbjct: 528 AGVFDLWGLTADDPRRTTTSVVNPLEADRPQLATTLLPALLEALGRNVSRGLTDVALFAI 587 Query: 573 SHV--------------------------YENDTPEGQKYMAA---GIRKGSSGIEGSGR 603 + V + P +++AA G+R+ G G GR Sbjct: 588 AQVVRPTEQTRGIELIPVHRRPTEGEIAKLDESLPRQPQHVAAVLTGLRE-PRGPWGPGR 646 Query: 604 -LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 + + + E R + A+A + V+L + R+ +HPGR + E Sbjct: 647 AVEAADAFEAVRII----ARASGID-----VTLRAARYLP-----WHPGRCAEVLVG-ES 691 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 +G+ G+ HP +++ GL C E+ LD+IP+ ++ +S V +D++ Sbjct: 692 SIGHAGQLHPAVIERTGLPKGTCAIELNLDAIPV-----VESLPAPRVSPFPAVFQDVSL 746 Query: 723 IVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 +V +PA + + ++ L++D+ +FDVF G +GE +KS+ + + T +D Sbjct: 747 VVSADVPAQVVADAVREGAGELLEDIQLFDVFTGPQIGEARKSLTFALRFRAPDRTLTED 806 Query: 782 DIRILMDRIVENVVKKTNAVLR 803 D D V+ ++ A+LR Sbjct: 807 DASAARDAAVQLAAERVGALLR 828 >gi|146296854|ref|YP_001180625.1| phenylalanyl-tRNA synthetase, beta subunit [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410430|gb|ABP67434.1| phenylalanyl-tRNA synthetase beta subunit [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 790 Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 243/822 (29%), Positives = 420/822 (51%), Gaps = 52/822 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPD-L 58 MK +L WLK ++ D S++++ + LT G +VE + R +++ + K+L V +P+ Sbjct: 1 MKVSLEWLKSLVEIDCSVDELVEKLTMSGTKVEGYEKRLDSVKNVVVGKILDVFLHPENP 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + + ++D + + ++ A N+ G A PG+ + N +++ + +G+ S GM+ Sbjct: 61 NLFVCKVDV-RECVLTIITAAKNIYKGAFVPVAKPGASLA-NGKVIDKLEFKGVVSEGML 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL L+ +D I+E D +G + + L++ D IID +T NR DC+ Sbjct: 119 CSLDELGLTSAEFPYADEDGIFIIEGIDDNKLGVDIKEALKIDDIIIDFEITSNRPDCLS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A ++ A KLK N+S + I + K ++ D ++C+ + +K V Sbjct: 179 VVGLAREIAAVLKKKLKFPNLSYIEVDDKIENYLDKIEIQDGNICRRYIGKVIKNVNIGP 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 +P W+R+RL A G+R I+ +VD+TNYV L+ G P H FD +I + VR A E+I+ Sbjct: 239 SPEWLRKRLIACGVRPINNIVDVTNYVMLEIGQPLHAFDLRKIHGRNIFVRLANDDEEII 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L P ++VIA + R ++AG++GG D+NT VL+E A ++P + R+ + Sbjct: 299 TLDGVKRTLRPVDIVIADEDRAIAVAGVMGGLETEVDENTKTVLLESATFNPAMVRRTSR 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 LG+ T++ RFE+G+ ++ +LI + G I + + + V + Sbjct: 359 YLGLRTEASNRFEKGLSPYFAEVAIQRACALIEEIGAGEVVKGTIDTYLVPQQQVTVKAD 418 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S +++L G+ VP ++ + ILERL ++ + K VP +R D+ + AD+ EE++RIY Sbjct: 419 FSYIEKLLGVSVPHDNVIEILERL--EILYDSQKNVFIVPPFRVDIIDMADISEEVIRIY 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D+I S + L+ +Q +K LA+ E+ ++SF S + + G Sbjct: 477 GYDKIPSRVYMGNAISS--GLTQKQKMVNDIKSFLANNGYYEIYSYSFESPKVYEILKGY 534 Query: 528 QRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEG 583 + ++ILNP+ D S MR LL +LKA N+ R I D IFE++ V++ ND Sbjct: 535 SLDDAVKILNPLGEDFSIMRMQLLSSILKAINLNLSRNIKDIKIFELAPVFKKSNDKLPD 594 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +K + A G + D + +LFD + ++ + F S Sbjct: 595 EKLVLA-----------LGNIGQDFYFVKGTLENLFD-----------LLMIEDVEFSSD 632 Query: 644 APSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + HP RS I TS + ++GY GE HP++L F + EVY+D + Sbjct: 633 HTNLNLHPTRSAKI-TSKDKIIGYIGEVHPDVLSGFDIQGRAIYAEVYIDK---LLELEK 688 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 K KK V L ++RD AF+V I + + ++ K ++++ +FDV++G+ + EG Sbjct: 689 KKKKYVPLPRYPAIERDYAFLVPDEIESRVIEDVFKKYASEILEEFYLFDVYKGQQIKEG 748 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS A + + + + T D DI L ++I+ +K N LR Sbjct: 749 FKSYAYKAVFRSKEKTLSDGDILPLQEKILGE-LKNYNIGLR 789 >gi|306784381|ref|ZP_07422703.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu003] gi|306788750|ref|ZP_07427072.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu004] gi|306807928|ref|ZP_07444596.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu007] gi|306967745|ref|ZP_07480406.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu009] gi|308330928|gb|EFP19779.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu003] gi|308334699|gb|EFP23550.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu004] gi|308345737|gb|EFP34588.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu007] gi|308354673|gb|EFP43524.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis SUMu009] Length = 831 Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 256/863 (29%), Positives = 410/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRVAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|215430542|ref|ZP_03428461.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis EAS054] gi|219557569|ref|ZP_03536645.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T17] gi|260200713|ref|ZP_05768204.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T46] gi|289443104|ref|ZP_06432848.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium tuberculosis T46] gi|289569697|ref|ZP_06449924.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis T17] gi|289753738|ref|ZP_06513116.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis EAS054] gi|289416023|gb|EFD13263.1| phenylalanyl-tRNA synthetase, beta subunit [Mycobacterium tuberculosis T46] gi|289543451|gb|EFD47099.1| phenylalanyl-tRNA synthetase subunit beta pheT [Mycobacterium tuberculosis T17] gi|289694325|gb|EFD61754.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis EAS054] Length = 831 Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 256/864 (29%), Positives = 410/864 (47%), Gaps = 93/864 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDWQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLRG 831 >gi|296125333|ref|YP_003632585.1| phenylalanyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] gi|296017149|gb|ADG70386.1| phenylalanyl-tRNA synthetase, beta subunit [Brachyspira murdochii DSM 12563] Length = 807 Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 233/836 (27%), Positives = 407/836 (48%), Gaps = 61/836 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 M+ LSWLK+ ++ D ++E+I +T G E+ ++ P I+ K++SV ++PD Sbjct: 1 MRVPLSWLKEFVNLDGFTVEEIAKKITLAGSEISSIETTGGDIPSVIIGKIISVHKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ ++D G + +VCGAPNVR G+ A G+ +P N + + IRG ES GM Sbjct: 61 DKLSVCKVDVGDGDTLSIVCGAPNVREGIYVPIAMIGAKLP-NGLTIKKASIRGFESNGM 119 Query: 118 MCSEKEL-----------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 +CS EL + DD + D+ +G LS + +D I +V +T NR Sbjct: 120 ICSRTELGYEEIEGVYGIWILDDDIEKVNADKDSILGNSLSTIVGTTDHIFNVEITANRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 D + + G A + L + ++I + ++ I +++ C + +K + Sbjct: 180 DLVSIIGFARE---CSLVLERRVSIPSVNTYDAAGGNIDITVENQESCYKYVGRLIKDIT 236 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P+WM++RL G+ I+ +VD+TNYV L+ G P H +D ++ D + VR A +GE Sbjct: 237 VGPSPDWMQKRLIMCGINPINNIVDVTNYVMLEYGQPLHAYDFDKVKDGKIIVRNAVNGE 296 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 KI LD ++ +L+ + +VIA + +AG++GG + T +L+E A +D I + + Sbjct: 297 KIKLLDGRDVELTDEVLVIADSEKPIGVAGVMGGDATKIEPETKTILIESACFDHIAVKK 356 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-----CGGTASDICIARNITYK 400 S TD+ YRFER +D + L +V LI++L + ++ + + + Sbjct: 357 STIVTNTKTDASYRFEREIDHTLTLAALNRVVDLIVTLDNSCKIASRSKELNVRQ---FD 413 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKAD 458 IVF VKR G+++ + I +R GF + GE + +V +PS+R D+ D Sbjct: 414 STIIVFDCGLVKRYLGLNMSKMEISSIFKRYGFKAVALGE-NNLKVEIPSYRHDLSIAED 472 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L+EEI R+YG + I+S +P + + +VK +AS + E +S Sbjct: 473 LIEEIARVYGYNNIESN-VPHIKCNP---IKTDYKEVSFVKHRMASYGLYETKQYSM--G 526 Query: 519 EQSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + ++ G E ++++NP++ +M +R + L LL + N + + A+FEV ++ Sbjct: 527 DSNIFKSIGIEEEKLIKVVNPLTTEMDVLRPTTLVSLLNSVLYNQNHRHKNGALFEVGNI 586 Query: 576 Y--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + END +K+++A + G+ +LW+ S R D FD ++ + Sbjct: 587 FYKENDNFVEEKHLSAVM----FGLYQE-KLWNKDS----RPYDFFDMSGIVEELLIKDL 637 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 W+ P S I E + G G HP +L F ++ EVY Sbjct: 638 KCTDYNLIPKEHKWFIPTMSAEIMIFGERI-GIIGRLHPKLLSLFDINT-----EVYFLD 691 Query: 694 IPISQ-----KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVT 748 I I + K+R K +K+ + V RDLA + D +I ++ I + +I +V Sbjct: 692 IDIRKTLKLVKERVKKQKLKDIGKYPAVFRDLALVCDNNIEFNKVIKSISRFNNIIQNVD 751 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V D + G+ +GEGK+S+AI + T R++DI ++E + + N LRS Sbjct: 752 VVDRYVGEQVGEGKQSIAISITYYDPNKTLREEDINNAEKSLLEMLKTRFNISLRS 807 >gi|303228405|ref|ZP_07315238.1| phenylalanine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] gi|302516907|gb|EFL58816.1| phenylalanine--tRNA ligase, beta subunit [Veillonella atypica ACS-134-V-Col7a] Length = 814 Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 232/835 (27%), Positives = 403/835 (48%), Gaps = 53/835 (6%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPD 57 MK +L W+ ++ LD + +++ D LT G+ VE+V + + L K++ + ++PD Sbjct: 1 MKASLQWMNEYVPLDLNRPAQELADELTQAGIPVEEVLSMDPGLKKIYTGKIVEITKHPD 60 Query: 58 LD----CAILRI-DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 D C + + + G+ Q+V A NV VG + A S + + I K+RG+ Sbjct: 61 ADKLQVCQVQCLSEDGEEITKQIVTAATNVAVGQIVPVAYHKSRLADGTEIKK-GKLRGV 119 Query: 113 ESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 S GM CS E +S D + I P P+G + + L L D + + LT NR+ Sbjct: 120 VSEGMFCSVAEFGISSDLVRPEEAQGIYIFPEGTPIGLDIKEALMLDDTVYEFELTANRA 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 DC + G++ + K I + ESI + ++ LC F V V Sbjct: 180 DCFSMVGLSREFGIMTNQKALFPVIMVNENGESIEGKASVAIEAHDLCTRFTSRLVTNVT 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D ++D L RRA +GE Sbjct: 240 IEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDCVADHTLIARRAKAGE 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD E +++ ++IA +AG++GG + D TT+VL E A+++ +I R Sbjct: 300 TLTTLDGNEREINESMLIIADTKGPIGVAGVMGGLTSEVTDKTTNVLFEAAVFNGPSIRR 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---R 402 + K LG+ +++ RFERGV+ + + L+ +C + + ++ +P R Sbjct: 360 TSKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPSCKVSVGVI-DVYPEPVEQR 418 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + F ++ G + + + IL +L F + D E VP+WR DV D+ EE Sbjct: 419 TVTFTAEQINDYLGTSIEKDRMVDILTKLEFGITESGDTIEALVPTWRDDVTGMPDIAEE 478 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 I RI D I P + ++ ++S T+ V LA + +++ +SF+ K+ Sbjct: 479 IARIVSYDNIA--PTIPVAILSSGGMTPKKSLTKDVTHYLAHAGLSQIITFSFMHKDGLT 536 Query: 520 QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 +L G R + ILNPIS + MRT+L+P +++A RN+ + D +FE ++VYE Sbjct: 537 NMMLPEGDNRYTAIPILNPISEEFPYMRTTLVPAVIEAAKRNIAQQNKDLWLFETANVYE 596 Query: 578 ------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P ++ MA GI G + W+ R D +D K ++ Sbjct: 597 PKALPLTEVPH-ERPMACGIMMGKV----TEAAWNQAQ----RDTDFYDVKGVVDGLLAK 647 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L + + S+YHPG S + + + +GE HP ++ F LS + FE+ L Sbjct: 648 -LGLTQYDIQPSSESYYHPGVSAHYTVNG-VTIANYGELHPQVVKNFDLSGKVYMFEIDL 705 Query: 692 DSIP--ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVT 748 +++ I R ++ S RDLA + + +G +V +IK + ++ V+ Sbjct: 706 EAVLSIIVPPFRYQS-----FSKFPGTSRDLAIVAPVSVTSGDIVALIKEHGGEYLESVS 760 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++G+ + G +S+A + + ++ T D+DI + I++ + K N LR Sbjct: 761 IFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDIDGAIQAIIDALATK-NCKLR 814 >gi|17232450|ref|NP_488998.1| phenylalanyl-tRNA synthetase subunit beta [Nostoc sp. PCC 7120] gi|30316260|sp|Q8YMH5|SYFB_ANASP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|17134096|dbj|BAB76657.1| phenylalanyl-tRNA synthetase [Nostoc sp. PCC 7120] Length = 810 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 238/836 (28%), Positives = 424/836 (50%), Gaps = 58/836 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ +S E++ LT G EVE +++R + +V +VL + +P+ D Sbjct: 1 MRISLNWLRELVEIKLSPEELAHILTMAGFEVEDIEDRRTWANGVVVGRVLERQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNVR + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDVGASETLNIVCGAPNVRADIYVPVATVGAYLPNIDLKIKPAKLRGVPSQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L + I P + P+G + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPSEVDGIYIFPQENLPLGSDVRPLLGLDDVILDVTATANRADALSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A KL NI P +S ++ + D+ C + ++ V+ +P W++ Sbjct: 181 VAALTDAKL---NIPEPGEVSVSGSVGKLGLKIADTQACPAYIGTVIEQVKIASSPEWLQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-----SDVLT--VRRACSGEKIL 288 QRL++ G+R IS +VDITNYV L+ G P H FD R+ +D LT VR A GE + Sbjct: 238 QRLRSAGVRPISNVVDITNYVLLEWGQPLHAFDQERLKFVANADSLTIGVRFANPGETLK 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD Q +L+ N++I ++ + ++AG++GG+ + T +++E AL+D + I RS + Sbjct: 298 TLDGQTRNLTTQNLLITANDQPVALAGVMGGEETEVHEGTQSLILEAALFDSVAIRRSSR 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 ++G+ +++ R+ERGV+ + + +SLI L G IA +P + Sbjct: 358 SVGLRSEASGRYERGVNRAELEIANRRALSLISELAAGVIVHQEIADT---RPDPASWSR 414 Query: 409 SEVKRLSGI-------------DVPIEDSLRILERLG--FSVIGEYDKFEVSVPSWR-QD 452 S + RL + ++ +D R L LG + GE + VSVP +R +D Sbjct: 415 SILLRLDRVNEVLGPINVGETGELEAKDVERTLTALGCELTPAGE-GTWNVSVPPYRYRD 473 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E + DL+EE+ R+YG D + LP + L + Q R ++ L + + E+++ Sbjct: 474 LEREIDLIEEVARLYGYDNF-CDTLP--DKAEAGYLPVDQELVRKLRAALRAEGLTELIH 530 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +S + G R++ + NP+ A+ S +RT LL GL+ A N+++ FE+ Sbjct: 531 YSLVKP-------GEDRQIVLSNPLFAEYSALRTDLLAGLIDAFQYNLEQGNGSLNGFEI 583 Query: 573 SHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 ++ E D + +K AGI G + + G+ WS S+E+ + F+AK SV + Sbjct: 584 GRIFWQEEDGLQ-EKDAIAGIIGGDTSL---GK-WSKGSKEQP--LAWFEAKGILESVFQ 636 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 L + + HPGR+ + LG FG+ HP + L + F++ Sbjct: 637 QLGILVEYQPDC-RDERLHPGRTASLWIGGN-RLGIFGQLHPQLRRDKDLPESVYVFQLD 694 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVT 748 LD + K S +P RD+AF + + I + L++ V Sbjct: 695 LDVFLNALDKDEILVPTFKPYSTYPASDRDIAFFAPVKVSVSEIEKAINKAGKGLLESVE 754 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD ++G+++ +G++S+A +++ + T D ++ + +++ E +V+K LRS Sbjct: 755 IFDEYRGENVPQGQRSLAFRLVYRASDRTLTDTEVEPVHNKVREALVEKFGVNLRS 810 >gi|254231850|ref|ZP_04925177.1| phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium tuberculosis C] gi|124600909|gb|EAY59919.1| phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium tuberculosis C] Length = 831 Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 256/863 (29%), Positives = 410/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGMMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|223937571|ref|ZP_03629474.1| phenylalanyl-tRNA synthetase, beta subunit [bacterium Ellin514] gi|223893734|gb|EEF60192.1| phenylalanyl-tRNA synthetase, beta subunit [bacterium Ellin514] Length = 626 Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 204/601 (33%), Positives = 321/601 (53%), Gaps = 35/601 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK TL+WLK ++D + S E++ D LT IG+EVE V+ + +V++ +++P+ D Sbjct: 1 MKVTLNWLKQYVDFNWSPEQLADRLTMIGIEVEGVEKLGGEFEGVVVAQVITKDKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP----ENNMIVNVRKIRGIES 114 ++ R++ G E Q+VCGA N G PG+ +P E + V KIRG+ES Sbjct: 61 RLSLCRVNDG-MTERQIVCGAQNFSAGDKVPLILPGASLPAKPGEQPFTIKVGKIRGVES 119 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS--DPIIDVSLTPNRSDCIGVR 172 GM+CS +EL L D ++ L DA VG ++YL S D + D+ +TPNR D V Sbjct: 120 QGMLCSPQELGLPDQVDGLLILSPDAKVGQPFAEYLGRSAGDVVYDLEITPNRPDLNSVI 179 Query: 173 GIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 GIA ++ A L+ I P +S + + + ++D+ LC ++ ++GV+ Sbjct: 180 GIAREISAVTGNPLRMPGIEIPTTSISQDKVNSLVGVRVEDAELCPRYSARIIRGVKVGP 239 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS------DVLTVRRACS 283 +P+W+R L+ VG+RSIS +VD+TNYV L+ G P H FD + + VRRA Sbjct: 240 SPDWLRNSLEKVGIRSISNVVDVTNYVMLEIGQPLHAFDYHLLQAKEGTRPTIVVRRALE 299 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEK LD QE L+ ++IA + + ++AGI+GG++ +D T DVL+E A + P NI Sbjct: 300 GEKFKTLDGQERTLTNQALLIADETKPIALAGIMGGQNTEINDQTVDVLIESAYFKPQNI 359 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPR 402 + K L + T+S YRFERG D+ + LIL GG + I A + Sbjct: 360 RATSKKLELRTESSYRFERGADVGICDWASQRAAQLILQTAGGQLCEGVIDAYPHPAHRK 419 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKF-EVSVPSWRQDVEEKADLV 460 ++ + +V L G+ + +L+ L +LG V I D++ V VP++R D++ + DLV Sbjct: 420 ELTLRHHKVSDLMGVKITPTQNLQYLRQLGLQVPIQNADEYCMVEVPTFRVDLKSEIDLV 479 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ-----SRTRYVKRVLASRAMMEVVNWSF 515 EEI R+YG+D I + P + + L + +R+L + E + Sbjct: 480 EEIARMYGIDNIPATP-------PRGVIGLNEFDPIFDEISEARRLLTGLGLNEAQGQTL 532 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 IS + L LE NP+S++M+ +R SLLPGLL + N++R D A+FE+ V Sbjct: 533 ISDASARLTSADLVALE--NPLSSEMNVLRPSLLPGLLDSLHHNLNRKNGDVALFEIGRV 590 Query: 576 Y 576 + Sbjct: 591 F 591 >gi|284801542|ref|YP_003413407.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes 08-5578] gi|284994684|ref|YP_003416452.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes 08-5923] gi|284057104|gb|ADB68045.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes 08-5578] gi|284060151|gb|ADB71090.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes 08-5923] Length = 802 Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 231/826 (27%), Positives = 414/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVNAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + ++G+A ++ A + K + P SE E I ++++ + +A+ V+ + Sbjct: 177 LSMKGVAHEVGA--IIHQKPAQPTEPDVSEKGKAEDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGTRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLTEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 ++ AG+ G+ I W ++ + VD F K ++ L + Sbjct: 592 LPIEQEHLAGLITGNWHIAD----W----QKTPKPVDFFVLKGIVEGLVNKLGIKSELHW 643 Query: 641 ESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + HPGR+ ++ EI GY G HP + + L FE+ + ++ Sbjct: 644 KQTEKEELHPGRTASLVLEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ + +IK + +L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGGKLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLNAIIR 802 >gi|227501822|ref|ZP_03931871.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium accolens ATCC 49725] gi|227077847|gb|EEI15810.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium accolens ATCC 49725] Length = 838 Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 235/830 (28%), Positives = 389/830 (46%), Gaps = 53/830 (6%) Query: 16 VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTGK 69 VS + +G E E + E P I +V+ +E + P C + Sbjct: 21 VSAADMDSGFVRVGFETEGYEPIPETTGPLVIGQVVEIEELTQFKKPIRYCQVNVGQANG 80 Query: 70 HQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 E+Q ++CGA N R+ V + PG+ +P + R+ S GMMCS EL L Sbjct: 81 TGELQGIICGARNFRLHDYVVVSLPGAELP-GGFKIAARETYDHISNGMMCSAAELGLGA 139 Query: 129 DSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 + I+ L + VG + LSD DV++TP+R + RG++ ++ ++ + Sbjct: 140 QANGIIVLGEEVADMVGEDARPVIGLSDTDFDVNITPDRGYALSARGLSREIASSFDLEF 199 Query: 187 KEI-------NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRL 238 K++ I E+ I DL + + + F + V G+ P WM + L Sbjct: 200 KDVADDPAVAGIDTSAVPEAEGSLINIDLREETKAQRFGVRKVSGIDPQARTPFWMEREL 259 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G RS++ D+TNYV L G P H FDA+ ++ LTVR A GEK LD+ +LS Sbjct: 260 MLCGQRSVNVATDVTNYVMLLLGTPMHAFDANEVAGDLTVRNAQEGEKFETLDHVTRELS 319 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 ++VVI D IQS+AG++GG H+ D TTDV E A+WDPI +AR+ + + +++ Sbjct: 320 GEDVVICDDNGIQSLAGVMGGTHSEISDQTTDVYFESAIWDPITVARTSRRHKLSSEASR 379 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L +L+ S+ GGT +P+ I + +G++ Sbjct: 380 RFERGVDPAIVEVALNIACALLHSIAGGTVEKGRTLVGEVAEPQAIRLRAEKPSEYAGVE 439 Query: 419 VPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 E + L+ +G +V D +V+ +WR D+ DL+EE+LR+ G++ I P Sbjct: 440 YSRETVISRLKEVGCTVEEGSDSVLQVTPATWRTDISMDVDLIEEVLRLEGLEDI---PT 496 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELE 532 L R L+ Q R R + LA EV+ FI+ + ++G + + Sbjct: 497 VLPTPAGGRGLTPAQKRRRAIGHGLAYAGYAEVLPTPFIANDTFDVWGLAADDARRNTVA 556 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NP+ +D + + T+LLP L+A GRNV R D A++ + V E + R Sbjct: 557 VQNPLESDKAILATTLLPATLEALGRNVARGRKDLALYGLQQVAFKRA-ESSPMPSVAQR 615 Query: 593 KGSSGIE----------------GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 G +E +G++ + R DA A ++ LD Sbjct: 616 PGDEVVEELLRTLPEQPLHVATVATGKMEHEGPWGEGRDYTYADAIESA-RLVARAAGLD 674 Query: 637 SLRFESGAPSWYHPGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + E+ +HPGR IK + + ++GY GE HP +L+ L C E+ + ++P Sbjct: 675 -IEVEAADHLPWHPGRCAAIKVAGTDDIVGYAGELHPQVLEALNLPPRTCAMELDITALP 733 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQ 754 ++++ LS+ + +D+A +VD+ IPA + + + LI+ V +FD+F+ Sbjct: 734 LTERFPAPV-----LSAFPALHQDIALVVDEDIPAEKVRATVEEGAGDLIESVDLFDIFR 788 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ LGEGKKS+A Q+ + T D+++ E ++ A +R+ Sbjct: 789 GEQLGEGKKSLAFQLQFRAADRTLTDEEVNEHRTTAAELAKQRFGAEMRA 838 >gi|146300717|ref|YP_001195308.1| phenylalanyl-tRNA synthetase subunit beta [Flavobacterium johnsoniae UW101] gi|146155135|gb|ABQ05989.1| phenylalanyl-tRNA synthetase, beta subunit [Flavobacterium johnsoniae UW101] Length = 806 Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 239/829 (28%), Positives = 396/829 (47%), Gaps = 49/829 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + TD + E+ + LT +GLEVE V+ ++ L + VL+ E++P Sbjct: 1 MKISYNWLKQFIKTDWTSEQTSELLTDLGLEVEVVEKYQSIKGGLEGVVVGHVLTCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGI 112 D D + ++ G +Q+VCGA NV G A G+ + + + KIRG Sbjct: 61 DADRLKVTTVNIGLEAPVQIVCGAANVAAGQKVPVATIGTVLYDKEGTEFTIKKGKIRGQ 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 +S GM+C+E EL L IM L + G S+ +++ D + ++ LTPNR+D + Sbjct: 121 DSHGMICAEDELGLGTSHDGIMVLDENLVPGTPASEVFQIANDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A DL A L + I + P S + L+I ++++ +L + + G+ Sbjct: 181 FGTARDLRAGMLQRGVNIELITPSVSNFRVDMRTLKIDVNVEEPALAPRYCGVTISGITV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +PNW++ RLKA+GL + +VD+TNYV + G P H FDA++I+ + V+ +G K Sbjct: 241 QESPNWLQDRLKAIGLTPKNNIVDVTNYVLHELGQPLHAFDAAKINGKVIVKTLPAGTKF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E L ++++I + IAG+ GGK +G + TT + +E A +D +++ ++ Sbjct: 301 TTLDDVERTLHAEDLMICDEKGPLCIAGVFGGKKSGVSEGTTAIFLESAYFDAVSVRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI-- 404 K + TD+ +RFERG+D LK LI + GG SD+ + P+K+ Sbjct: 361 KRHQLNTDASFRFERGIDPTITEYALKRAALLIQEVAGGKITSDV-----VEVYPKKVED 415 Query: 405 --VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 V +N S V ++ G ++P + +IL L V D +++P++R DV+ + D++ Sbjct: 416 FSVLLNFSHVSKIIGQEIPKDTIKKILVSLDIKVNSVSDTGLGLTIPAYRVDVQREIDVI 475 Query: 461 EEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EEILR+YG + I+ S+ T R + + L S+ E++ S + Sbjct: 476 EEILRVYGYNNIEFSKKFNATVANSPRTEDYKVQNV--IASQLNSQGFHEMMANSLTTAA 533 Query: 520 QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + L + E + +LNP+S+D+S MR SLL L+A N++R +D +FE Y Sbjct: 534 YAKLSTALKEEHNVTMLNPLSSDLSTMRQSLLFSALEAVSYNINRRNSDLKLFEFGKSY- 592 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 KY+ + SG + + D F K +V L Sbjct: 593 ------HKYLNGYEEHKHLTLSISGNRNKESWTTPQKGTDFFLLKGYVKAV------LAR 640 Query: 638 LRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 L E S AP G L G +IL FG+ + + D + Sbjct: 641 LGIEKISNAPVQSDIFSEGTSICYNNDTLVEMGVVKKSILKHFGIKQDVYYADFNWDLV- 699 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 K T K + V+RDLA ++D+ ++ N+ + ++ L+ D+ +FDV+Q Sbjct: 700 --LKIITGKIKYTEIPKYPEVRRDLALLIDEKTTYESIFNLARQTEKTLLKDINLFDVYQ 757 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G L EGKKS A+ IQ T D I +M ++ + + A LR Sbjct: 758 GNKLPEGKKSYALSFTIQDNTKTLTDAQIDKIMSKLQQTFETELGASLR 806 >gi|186681560|ref|YP_001864756.1| phenylalanyl-tRNA synthetase subunit beta [Nostoc punctiforme PCC 73102] gi|186464012|gb|ACC79813.1| phenylalanyl-tRNA synthetase, beta subunit [Nostoc punctiforme PCC 73102] Length = 816 Score = 303 bits (777), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 237/843 (28%), Positives = 427/843 (50%), Gaps = 66/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ +S E++ +TLT G EVE +++R + +V KVL + +P+ D Sbjct: 1 MRISLNWLRELVEIKLSPEELAETLTMAGFEVEDIEDRRTWANGVVVGKVLERQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGA NV+ + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDIGAGETLNIVCGAANVKADIYVPIATTGTYLPNIDLKIKPAKLRGVPSQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L D I + P+G + L L D I+D++ T NR+D + + G+A + Sbjct: 121 CSLKELGLPTDVDGIHIFTQENLPLGSDVRPLLGLDDVILDLTATANRADALSMVGVARE 180 Query: 178 LVAAGLGKL---KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A GKL + +S ++ ++ L+I D+ C + ++ V+ +P W+ Sbjct: 181 VAALTGGKLSIPEPSEVSISKNTGNLTLKIA----DTQACPAYIGTVIEQVKIASSPEWL 236 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKI 287 +QRL+A G+R IS +VDITNYV L+ G P H FD R+ V + VR A +GE + Sbjct: 237 QQRLRAAGVRPISNVVDITNYVLLEWGQPLHAFDRDRLKSVAGSENLSIGVRFANNGESL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD Q L+ N++I ++ R ++AG++GG+ + T +++E AL+D + I RS Sbjct: 297 KTLDGQTRTLASQNLLITANDRPVALAGVMGGEETEVYEGTQSLVLEAALFDSVAIRRSS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKIVF 406 ++ G+ +++ R+ERGV+ + + +SLI L AS I + + I +P + Sbjct: 357 RSAGLRSEASGRYERGVNRAELEIANRRALSLISEL----ASGILVQQEIADTRPDPSTW 412 Query: 407 MNSEVKRLSGIDV---PI-----------EDSLRILERLGFSVIGEYD------KFEVSV 446 S RL ++ PI +D RIL LG + + + VSV Sbjct: 413 SRSIALRLDRVNQILGPIDLGEDTGELQGQDVERILTALGCQLTPSVEDSNHQPTWSVSV 472 Query: 447 PSWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P +R +D+E + DL+EEI R+YG ++ + LP + + L L + R ++ L + Sbjct: 473 PPYRYRDLEREIDLIEEIARLYGYNRF-CDTLP--EKSEGGYLPLDEELIRKLRAFLRAE 529 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + E++++S + G R++ + NP+ A+ S +R LL GL+ A N+++ Sbjct: 530 GLTELIHYSLVKP-------GEDRQIVLSNPLFAEYSALRNDLLSGLIDAFQYNLEQGNG 582 Query: 566 DFAIFEVSHVYENDTPEGQKYMA-AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE+ ++ + Q+ A AGI G + G+ WS E + F+AK Sbjct: 583 SLNGFEIGQIFWREEDGLQETEALAGIIGGDRTV---GK-WSKSGREEP--ITWFEAKGI 636 Query: 625 ALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 SV + F+ + HPGR+ + LG FG+ HP + GL + Sbjct: 637 LESVFRQLAL--QVEFQPDCRDNRLHPGRTASLWIRGN-RLGIFGQLHPQLRREKGLPDS 693 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDR 742 + F++ LD + S + S +P RD+AF I + +I + Sbjct: 694 VYVFQLNLDVLLDSLGEDEVLVPTFQPYSTYPASDRDIAFFAPVKISVSEIEKVITKAGK 753 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 L++ V +FD ++G+++ EG++S+A +++ + T + ++ + +++ E +V+K Sbjct: 754 DLLESVELFDEYRGENVPEGQRSLAFRLIYRASDRTLTEAEVEPVHNKVREALVEKFGVN 813 Query: 802 LRS 804 LRS Sbjct: 814 LRS 816 >gi|78184708|ref|YP_377143.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. CC9902] gi|93140715|sp|Q3AVJ1|SYFB_SYNS9 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78169002|gb|ABB26099.1| phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. CC9902] Length = 807 Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 235/839 (28%), Positives = 420/839 (50%), Gaps = 67/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M +LSWLKD + D S++ + + L+ G EVE +D+ A S +V VL+ +++P+ D Sbjct: 1 MLVSLSWLKDLVQVDDSVDDLAERLSMAGFEVENIDDLSARSQGVVVGHVLTRDKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +Q+VCGA NVR G+ A G+ +P ++ + ++RG+ S GM+ Sbjct: 61 KLSVCTVDIGAKESVQIVCGAANVRAGIHVPVATVGAVLPAVDLTIKAGELRGVASNGMI 120 Query: 119 CSEKELMLSDDSASIM-------ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL L+ +S+ I E+P VG ++ L D ++++++T NR D + + Sbjct: 121 CSLSELGLTAESSGIAILEDTTKEIPA---VGTPVAALFGLDDAVLELAITANRPDGLSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN- 227 GIA ++ A L +S PL + E PL+ + D +A+ CV+GV+ Sbjct: 178 VGIAREVAA-----LTNAELSLPLLNHTPEQEPLQAELD------GSYYAVACVEGVQGG 226 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTV 278 +P W++QRL G+ +++A+VDITN V L++G P H FDA + + V Sbjct: 227 QESPPWIQQRLNRAGINAVNAVVDITNLVMLEQGQPLHAFDAEALESLTGKPVDAASFAV 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A E + LD+Q L P V+ R +IAG++G + + D+TT + +E A++ Sbjct: 287 RPAKDQETFIGLDDQSLCLDPRVQVVTCHDRAIAIAGVMGSRDSAVSDSTTKIWLESAMF 346 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 PI + +S + +G+ TD+ RFE+G+ + + + + L+ + + Sbjct: 347 SPIRVRQSSRAVGLRTDASSRFEKGLPPEVTLACSQRAIELLSDQFACRVNGRWVGGEGP 406 Query: 399 YKPRKIVFMNSEVKRLSG-IDV---PIEDSLRILERLGFSVIGEYDKFE-----VSVPSW 449 P + + +L G ID P++ + +E+ ++ E + + ++ PS Sbjct: 407 RTPVPLQLRRDALHQLLGPIDTDSGPVDLADHTIEQCLTALGCELESTDEGWAVMTPPSR 466 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 RQD+ + DL+EE+ R+ G D+ S P P++ +L+ +Q R ++R+ S + Sbjct: 467 RQDLHREVDLIEEVARLVGFDKFGSHLPDPVS----PGSLTSRQQAERRLRRLFCSTGLQ 522 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E+ S + G + I NP+ A+ S++RT+L L+ RN+ ++A + Sbjct: 523 EITTLSLVGSSD------GDARIAISNPLLAETSHLRTNLWEEHLQICVRNLKASMAGCS 576 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 IFEV + Y TPE + +GI G I G RL + + + + ++A+ LS Sbjct: 577 IFEVGNTYSG-TPE--SVVQSGIISGV--ICGDRRLERWSTSGKYQAPNYYEARG-VLSR 630 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + + L+ + HPGR+ + LG FG+ HP + D L FE Sbjct: 631 VMEALHLELSDRPLADDARLHPGRAATLVMEGR-PLGCFGQLHPALADDLSLPESTYLFE 689 Query: 689 VYLDSIPISQKKRTKTKKVVHLS--SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 + L+ + + RT ++ S ++ +RDLA +VD++ A L+ I+ + L++ Sbjct: 690 LDLERL-LDATTRTNRWTPIYKSFPTVPASERDLAVVVDRNSNAADLIQAIRKAGKPLLE 748 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V + D F+G LG+ K S A ++ + +T DD I+ + D++ + K+ A LRS Sbjct: 749 HVELIDRFEGDQLGDQKVSQAFRLRYRSQNETLTDDKIQPVHDKVRAALSKQFKAELRS 807 >gi|269837698|ref|YP_003319926.1| phenylalanyl-tRNA synthetase, beta subunit [Sphaerobacter thermophilus DSM 20745] gi|269786961|gb|ACZ39104.1| phenylalanyl-tRNA synthetase, beta subunit [Sphaerobacter thermophilus DSM 20745] Length = 818 Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 253/843 (30%), Positives = 413/843 (48%), Gaps = 64/843 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPDLD 59 MK + WLK+ + D+ +I LT GLE E V V V+ VE +P+ D Sbjct: 1 MKVPVRWLKELVPNDLPPSEIAQRLTMAGLEAEAVTEIGGTWDRIYVGVVERVEPHPNAD 60 Query: 60 CAIL-RIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKIRGI 112 +L ++ G+H + VV GAPN+R G L G G + IRG+ Sbjct: 61 RLVLATVNAGEHH-LTVVTGAPNIREGQKVPLALAGARLIDGYSEEFRMFTLKPSTIRGV 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CSEKEL LSD+ I+ L DAPVG L DYL + +I+ +TPN + Sbjct: 120 RSEGMVCSEKELGLSDEHEGILVLDPDAPVGVPLRDYL--GESVIEFEITPNLVHAFSMV 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNV 229 GIA +L G L + + P + E++P + + ++ LC + ++ VR Sbjct: 178 GIAREL-----GALIDAPVRLPELADLEAVPRDPGLVIVEAPDLCPRYVGVVIENVRVEP 232 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL A G+R IS +VDITNYV L+ G P H FD + + + VRRA GE+I Sbjct: 233 SPEWLQRRLAAAGVRPISNIVDITNYVMLEWGQPLHAFDRRFLHEGRIVVRRARPGERIE 292 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ + +L+PD +VIA R +IAG++GG + D+TT +L+E A ++ +NI + + Sbjct: 293 TLDHVDRELTPDMLVIADADRAVAIAGVMGGLESEIRDDTTTILLEAANFNMLNIRHTAR 352 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFM 407 + T++ RFERG+D + + V+LIL L + + A P+ +V Sbjct: 353 AQRLRTEASARFERGLDPNLVWTATQRAVALILQLNPEARVTVMADAYAEPRHPKTVVMP 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFE---VSVPSWRQDVEEKADLVEEI 463 +E+ RL GID P E L +L RL I + D V VP++R D+ AD+VEE+ Sbjct: 413 RNEIPRLLGIDYPDEVVLDVLGRLELQPEIRDVDGVRSVVVQVPTYRSDINIPADVVEEV 472 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SV 522 RI G + + E LP Q +++ + +L + M E++ + +S++ Sbjct: 473 ARIVGYESL-PETLPWGQTPHVTRDPMRRL-IADTQDLLVAAGMTEIITYPMVSEDDLRA 530 Query: 523 LFGGGQR-----------ELEIL---NPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 L G + EL+++ NP+ ++ + MR +LLP LK N+ + A A Sbjct: 531 LVPGAEAAPDRYGFFPRPELDLVTARNPLRSEWTMMRPTLLPAWLKNVAENLKHS-AGVA 589 Query: 569 IFEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +FE VY ++ P+ + + G +G + L+ + R VD FD K Sbjct: 590 VFETGRVYLPRGLDELPDERPTLCLGF----AGERNAADLY-----HQARPVDYFDVKGV 640 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +++ ++D PS HPGR+ I E V G GE HP + + FG+ Sbjct: 641 VDALLPRLGAVDIAVRPITHPS-LHPGRAAEITVKGEPV-GIIGEVHPVVAEQFGIP--- 695 Query: 685 CGFEVYLDSIPISQKKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVD 741 G V + I + T V +S V++D A +V++ +PA + ++ Sbjct: 696 AGQRVAVAEIDLKALFDTGLSDVELRPVSRYQQVEQDFAVVVEEAVPADAVEAALRAGAG 755 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 L V +FD+++G ++ GKKS+A +V + +++I+ + RI + ++ + Sbjct: 756 PLATSVRLFDIYRGPAIDAGKKSLAYRVTLSAPDRELSENEIQRIRGRIERQLARQVSGT 815 Query: 802 LRS 804 LR+ Sbjct: 816 LRA 818 >gi|326693286|ref|ZP_08230291.1| phenylalanyl-tRNA synthetase subunit beta [Leuconostoc argentinum KCTC 3773] Length = 818 Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 230/839 (27%), Positives = 429/839 (51%), Gaps = 57/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEK--ICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVER 54 MK L+WL D+LD ++L++ + D + +VD+ L+ + +V++V Sbjct: 1 MKTNLTWLNDYLDQTIALDQQAVADLAEQVARTSVEVDSVTTLAQQQDGLVVAEVVNVVP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKI 109 +PD D I +++ G+ Q +QVV GAPNV VG L V A G+ I M + K+ Sbjct: 61 HPDSDHMVITQVNIGEPQLVQVVTGAPNVAVGQLVVLAKVGAHIINRESGELMTLTAAKL 120 Query: 110 RGIESTGMMCSEKELML------SDDSASIMEL-PIDA-PVGGRLSDYLELSDPIIDVSL 161 RG S GM+ + +E+ D A I P D G L ++DP++D L Sbjct: 121 RGEMSYGMLVALQEIGFDNKIAPKDFEAGIYVFGPNDGVQPGDDALVALGMTDPVLDTDL 180 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCP----LSSESIPL-EIKFDLDDSSLCKG 216 TPNR+D + + G A + G + + ++ P + E++ ++ ++D +L Sbjct: 181 TPNRADMLSMIGTAYEF-----GAMLKQPVTEPAFDLVEYETLARDQVDVVIEDDTLAPK 235 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-V 275 +A+ V V +P W+++ L G+R I+ +VDITNY+ L G P H FD ++SD Sbjct: 236 YALRVVNNVTVGDSPLWLQKALWNAGMRPINNIVDITNYMMLMYGQPLHAFDLDKLSDKT 295 Query: 276 LTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 + VRRA + E+++ LD Q DL + +++VIA+ +AG++GG + D T +++E Sbjct: 296 VHVRRAKTAEQLVTLDEQTRDLRAGEDIVIATADEPLMLAGVMGGASSEVDHTTRHIVLE 355 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICI 393 A+++P + + + + +++ RFERGV+ L H L+ L GG A + Sbjct: 356 GAVFNPSLVRATARRHNLHSEASARFERGVNWDATFTALDHAAQLVDELAGGQVARGRVV 415 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 A + Y+ + + V ++ G + + D I ++L D +V++P+ R D+ Sbjct: 416 AADTPYEEIVMPLTAARVNQILGTALTLADIAAIFDQLALDYQIAADTIQVTLPARRPDL 475 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 +ADL+EEI R+YG D + LP +L+L+Q + R +R++ S + + +++ Sbjct: 476 RIEADLIEEIARLYGYDNLPVT-LPYGPTT-PGHLTLRQRQIRASRRIMESLGLNQAISY 533 Query: 514 SFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + E++ F G++ + + P+S+D + +R +LL GLL+ NV+ +AD A++E Sbjct: 534 VLTTPEKAQQFAENPGEKVVALDYPMSSDRTTVRQNLLAGLLEDVVYNVNHGVADVALYE 593 Query: 572 VSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 ++ +N P +++A + +G + DK+++ F D+ A+ L+ Sbjct: 594 QGRIFIGTDDNTLPTEMEHLAGVL----TGTRATSSWQQDKTQKPVDFYDMKGIVAEYLA 649 Query: 628 VIEPFVSLDSLRFESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 I ++++R+E+ HPG++ I S ++ LG+ G+ HP + L+ P+ G Sbjct: 650 QI----GVENVRYEATKRHQNMHPGQTADIY-SGDVYLGFVGQIHPKVTQAHKLA-PVFG 703 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLI 744 FE+ L ++ + T +S ++RD A +VD+HI +V +I+ D+L+ Sbjct: 704 FELNLFAV---MSQVTGDVAYAPISRFPQMRRDAALLVDEHIQHADIVALIRETAGDKLV 760 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV +FDV+ G +L GK+S+A + Q +T + ++ +R+ ++ + + +R Sbjct: 761 -DVQLFDVYIGDNLPAGKRSLAYTLTYQDNDETLVEAEVNADFERVTNALIAQLHVEVR 818 >gi|257069320|ref|YP_003155575.1| phenylalanyl-tRNA synthetase beta subunit [Brachybacterium faecium DSM 4810] gi|256560138|gb|ACU85985.1| phenylalanyl-tRNA synthetase beta subunit [Brachybacterium faecium DSM 4810] Length = 866 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 259/885 (29%), Positives = 398/885 (44%), Gaps = 103/885 (11%) Query: 2 KFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 + L+WL +H L S E + L S+GLE E + + P + +VL + P + Sbjct: 3 RIPLTWLAEHTALPEGTSAESVAAALVSVGLEEEGIFGAQVTGPLVVGRVLELVGEPQKN 62 Query: 60 CAIL---RIDTG-KHQEIQ----------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + R+D G +H E +VCGA N G L V + PG+ +P Sbjct: 63 GKTINWVRVDVGPEHNEDADNPKDPQPGQERPSRGIVCGAHNFAPGDLVVVSLPGTVLP- 121 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSAS---IMELP------IDAPVGGRLSDYL 150 + + RK G S GM+CS +EL L D A I+ L + A G L Sbjct: 122 GDFAIAARKTYGHVSDGMICSGEELGLGPDPAGEDGIIVLGRGHGAGLTAEPGDDAIALL 181 Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPL-SSESIPLEIKFDLD 209 L+D ++++++TP+R C +RG+A + + + PL S +EI+ D Sbjct: 182 GLADEVVEINVTPDRGYCFSLRGVAREYSHSTGAAYTDPVAEIPLPESAGGGVEIRLQ-D 240 Query: 210 DSSL-----CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 DS L C F V GV P WM +RL G+R IS +VD+TNYV LD G P Sbjct: 241 DSPLRGGEGCSRFVAVGVTGVDPTAQTPRWMARRLTQAGMRPISLIVDVTNYVMLDLGQP 300 Query: 264 SHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI----ASDG-RIQSIAGIIG 318 H +DA ++ + VRRA +GE++ LD+ L P++++I DG R+ +AG++G Sbjct: 301 LHAYDAQKLVAPIVVRRARAGEELTTLDDVTRTLDPEDLLITDSEGGDGARVLGLAGVMG 360 Query: 319 GKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS 378 G+ + TTD+L+E A + I +AR+ + + +++ RFERGVD Q + Sbjct: 361 GESTEVSETTTDILLEAATFQAITVARTARRHRLPSEAAKRFERGVDPQLPLAAALRAAR 420 Query: 379 LILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI---DVPIEDSLR----ILERL 431 LI+ GG + P I +RL GI + DSL LE L Sbjct: 421 LIVEHGGGEIDTRLTDEGVIAPPAPIELPLDAAERLVGIAYTPAQVRDSLETIGCTLEEL 480 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 G + V+ PSWR D+ + DLVEEI R+ G D+I S L R L+ Sbjct: 481 GG------ESLRVTPPSWRPDLTIREDLVEEIARLVGYDKIPSL---LPTAPGGRGLTRG 531 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGG---QRELEILNPISADMSNMRT 546 Q R R LA + EV + FI ++ + + + +LNP+S D MRT Sbjct: 532 QQGHRAAGRALAEAGLTEVASAPFIGAGVFDTLRYAADDERRSAVRLLNPLSDDEPLMRT 591 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS----------- 595 SLL LL RN+ R AIF+ + T + + + ++ S Sbjct: 592 SLLQTLLPVARRNLGRGEESVAIFQHATTSRARTTDAPTPIPSAAQRPSEAELAAVEETL 651 Query: 596 -----------SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 G G G D + + D F+ A + + + +R A Sbjct: 652 PAETSALAAVVGGPSGPGSWLGDPAP--WGWADAFEVARRAAAAVGTRI---EVRQAEHA 706 Query: 645 PSWYHPGRSGIIKTSA----EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 P +HPGR+G ++ A V+G+ GE HP ++ GL E+ L+++ S Sbjct: 707 P--FHPGRAGELRVLAADGESTVIGHAGELHPAVIKEIGLPARTSAVELDLEALIASAPA 764 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLG 759 + V S+ P K D AF+V+Q +PA + I+ + L +DV +FDV+ G+ +G Sbjct: 765 VIEAAPV---STYPPAKEDFAFVVEQDVPASAVEAAIVVGIGDLAEDVHLFDVYTGEQIG 821 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EGKKS+A V ++ + T + I R + V VLR+ Sbjct: 822 EGKKSLAFAVRLRSDEGTLTAERIGEARKRCIAAVESAVGGVLRA 866 >gi|150016450|ref|YP_001308704.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium beijerinckii NCIMB 8052] gi|149902915|gb|ABR33748.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium beijerinckii NCIMB 8052] Length = 792 Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 247/837 (29%), Positives = 412/837 (49%), Gaps = 80/837 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK +WLKD++D +VS +++ D LT G ++E+ V + + K+ ++E++PD D Sbjct: 1 MKVPYNWLKDYVDINVSPKELGDKLTLTGSQLEELVIQGDVIQNVVTGKITNIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G Q IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDIGSEQ-IQIVTAATNMKEQDVVPVALHGSTLADGTKIKK-GKLRGVVSNGMF 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL + D +M LP D +G + + L L+ I+D +T NR DC+ + G+A Sbjct: 119 CSEEELGTAGDEPVHGLMILPTDTKLGVDIKELLGLNKAILDFEITSNRPDCLSMVGMAR 178 Query: 177 DLVAAGLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + AA K N+ + +S++I E+ ++ D+ LC + VK V+ +P WM+ Sbjct: 179 ETAAALRKTYKMPNLEYKIKNSKNINEELTVEVKDT-LCNRYMARGVKNVKVQPSPGWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL G+R I+ +VDITN+V L+ G P H FD I ++ + + RA GEK LD E Sbjct: 238 ERLLEAGIRPINNIVDITNFVMLETGEPMHAFDKREIATNKIVIERAKRGEKFTTLDEVE 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L + I I +AGI+GG ++ ++TT+V+ E A +D NI + K L + T Sbjct: 298 RELDDSMLCIKDGENIIGLAGIMGGLNSEIKEDTTEVVFECANFDGTNIRVNSKKLNLRT 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 ++ RFE+ +D L LI L G + I K V + S V Sbjct: 358 EASGRFEKDIDPNLAEIALNRACRLICELDAGEVMEGTIDVYNNKKEVSTVTVESNWVNS 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+ E+ R L+ + D V+ P++R D+ + D+ EEI RIYG ++I Sbjct: 418 FLGTDLSKEEMKRCLDSVDLFTEINGDNLVVTAPTFRVDIAIREDIAEEIARIYGYEKI- 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--------EVVNWSFIS-------- 517 P + +V +R RY K +L +R +M + +++SF+S Sbjct: 477 --PTTIFKVSTER-------EPRYRKGLLDNRVVMLATGSGLNQSISYSFVSPKVFDKIN 527 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S L + ++I NP+ D S MRTS LP ++++ GRN R + +FE+ VY Sbjct: 528 LPEDSDL----RNVVKIRNPLGEDYSVMRTSTLPSMMESLGRNYSRNNSYVRLFEMGKVY 583 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 E P + + GI + D C ++DL + I Sbjct: 584 IPNVDETKLPTEKNILTIGI-------------YGD-----CDYLDL----KGVVENITD 621 Query: 632 FVSLDSLRFESGAPS-WYHPGRSGII---KTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + + S+++E + + YHPG++ I +T+A G GE H ++ + +GL P Sbjct: 622 GLGIKSVKYERESENVSYHPGKTAKIVVGRTNA----GTLGEVHLDVCENYGLDVPCYVA 677 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 E+ LD + + KK L V RD+A +VD + + + IK L++ Sbjct: 678 ELDLD---VLYENADMDKKYKALPKFPAVTRDIALLVDDSLLVQEIDDTIKRAGGNLVEK 734 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FD+++GK + +GKKS+A + + T D D+ + ++I++++ K A LR Sbjct: 735 VELFDIYKGKQIPDGKKSIAYAIWYRDENKTLTDKDVNKVHEKILKSLEYKLGATLR 791 >gi|227534833|ref|ZP_03964882.1| Phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain) (PheRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|227187589|gb|EEI67656.1| Phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain) (PheRS) [Lactobacillus paracasei subsp. paracasei ATCC 25302] Length = 803 Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 224/821 (27%), Positives = 408/821 (49%), Gaps = 36/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D VS E++ D ++ G+EV+ V + +A L + KV+S +P+ D Sbjct: 1 MDVSYEWLKELVDVPVSPEELADKVSRTGIEVDGVKHPDAGLKKIVVGKVVSATPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLHLCQVDVGEETPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDD--------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ S++ + P++ G L + D ++D +TPNR+D +G Sbjct: 120 CALQEIGFSENVVPKPYLNGIYVFNEPLEP--GSDALAALGMHDAVLDFEITPNRADALG 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 +RG+A + V A + PL+ P+ + ++ D+ + + + V+ Sbjct: 178 MRGVAWE-VGATYAEKPHFE-EKPLTEGDRPVGDFLSAEVKDAKDAPSYQLRVIDHVKVQ 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TN + L G P H FD +++ S + VRRA +GE + Sbjct: 236 ESPLWLQKRLWLAGIRPINNIVDVTNLIMLAYGQPLHAFDYAKLGSQQIVVRRAKNGEPL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E++L ++VI + ++AG++GG ++ TT V++E A ++P+N+ ++ Sbjct: 296 TTLDGNEHELDDQDIVITNGQVPVALAGVMGGLNSEITPETTTVVIESASFNPVNVRKTA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +++ RFE+G +L + L V+ + L G ++ ++ +V + Sbjct: 356 LKYNLRSEASSRFEKGTNLADINRALDAAVAWMAELSEGQVAEGTVSPTSVSAEDVVVDI 415 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G D+ + +I E+LGF V F V+VP R D+ KADLVEE+ RI Sbjct: 416 SLDHINHVLGTDLTQQQVTQIFEQLGFDVTESDGLFAVAVPPRRWDIHIKADLVEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 YG D + S LP T + S QQ R R + +L + +V+ ++ S E + F Sbjct: 476 YGFDNLPST-LPTTTMTIGEYTS-QQKRIRRTRHLLEGLGLTQVITYALTSAEAAEQFKL 533 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 ++ +P++ D + +R +++ GLL N R D AI+E ++ T G + Sbjct: 534 QPGLPTKVDSPMTTDHAVLRMNMISGLLNVIKYNQARKETDVAIYEQGRIF---TKTGDQ 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGA 644 I I +G + + + + VD F AK ++ + D +RFE + A Sbjct: 591 VRPTEIEYLGGAI--TGNVVAKDWHQSAKAVDFFYAKGIVTHLLGDYSLADPIRFEATQA 648 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPG++ I ++V G G HP L FE+ LD++ + ++ Sbjct: 649 VAELHPGQAANIFVGDQLV-GILGRLHPAFEHAEHLPATFV-FELDLDALFAAPRQ---- 702 Query: 705 KKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 +K+ + P V RD+A VD+ + ++ I ++ + DVT+FDV+ G + G+ Sbjct: 703 EKIAQPAPKFPAVTRDIALQVDEQVTNDQVMAIFHEHGGAFLQDVTLFDVYAGDHIAAGQ 762 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T +D++ D++ + A +R Sbjct: 763 KSLAYTLTYRRDDQTLTEDEVTQAFDKVKAALQTGIGAAIR 803 >gi|111224583|ref|YP_715377.1| phenylalanyl-tRNA synthetase subunit beta [Frankia alni ACN14a] gi|111152115|emb|CAJ63843.1| phenylalanine tRNA synthetase, beta-subunit [Frankia alni ACN14a] Length = 871 Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 245/871 (28%), Positives = 406/871 (46%), Gaps = 93/871 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV------KVLSVER 54 M +SWL+++++ + D L G EVE + + +V +++ ++ Sbjct: 27 MLIVMSWLREYVEGLPPTRAVADALIRAGFEVEGLRGVGSDVSGVVVGEIVDFEIVETKK 86 Query: 55 NPDLDCAILRIDTGKHQEIQ----VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 C + R+ G+ ++CGA N VG A PG+ +P + RK Sbjct: 87 KAVRWCQV-RVAAGEASSAPGVRGIICGAHNFAVGDRVAVALPGAMLP-GGFAITARKTY 144 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G S GM+CS +EL + D+ I+ LP AP+G +++ L+L D I+D+++TP+R + Sbjct: 145 GHVSDGMICSARELGIGDEHDGILVLPPSAPLGADVTELLDLVDEILDIAVTPDRGYALS 204 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD------LDDSSLCKGFAMCCVKG 224 VRGIA + AA L + P S ++ E ++D++ C + V G Sbjct: 205 VRGIARE--AATAFALPFTDPGAPRSGQAAAGEGAAGEAYPVVVEDTAGCDRYVARVVTG 262 Query: 225 V-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 V V P +RL G+R IS VD+TN V L G P H FD ++++ + VRRA + Sbjct: 263 VDPAAVTPLTWSRRLALAGMRPISVPVDVTNAVLLGLGQPLHAFDRAKLTGAIIVRRAEA 322 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE + LD E L P+++VIA D ++AG++GG TTD+++E A +DPI++ Sbjct: 323 GETLRTLDGVERTLDPEDLVIADDTGPIALAGVMGGASTEISTQTTDIVLEAAHFDPISV 382 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-- 401 AR+ + + +++ RFERGVD V L++ L G A ++ ++P Sbjct: 383 ARTARRHRLSSEASRRFERGVDPALAPVAAATAVDLLVELAG--ARPAAGVTDLDHRPAV 440 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----------FEVSVPSWR 450 + E +RL+G E R L +G +V+G VS PSWR Sbjct: 441 APVPLPLREPERLAGRPYSAEVVRRRLADVGCTVVGPAAGSAADSAAGEGVLVVSPPSWR 500 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ ADLVEEI+R+ G D I P+ L + R L+ Q R V R LA + EV Sbjct: 501 PDLTRPADLVEEIVRLEGYDTI---PVTLPLLPAGRGLTAAQRMHRAVGRALAYAGLAEV 557 Query: 511 VNWSFISKEQSV---LFGGGQREL--EILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + F++ + + L +R L + NPI+ D + +RT+LL GL+ A RN+ R Sbjct: 558 LTLPFVAADAADALSLPAEDKRRLAVRVANPIAEDAAYLRTTLLSGLIAAAVRNIGRGQQ 617 Query: 566 DFAIFEVSHVY---------------------------ENDTPEGQKYMAAGI--RKGSS 596 D A+FE+ V+ ++ P +++AA + R+ + Sbjct: 618 DLALFEIGRVFRELPGAPVRVPTPPVDRRPSAEEVAALDSVLPRQARHVAALLTGRREPA 677 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G WS E + A+ V+ V L +L +G +HPGR + Sbjct: 678 G-------WSTPGREADWADAVDAAQ-----VVAEAVGL-TLTVNAGDAMPWHPGRCAEL 724 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSSLH 714 +V G+ GE HP +L GL E+ L+ + + T +V +S+ Sbjct: 725 TVGGRLV-GFAGELHPRVLGDAGLPPRTVALELSLE---VLVEAATAAPPIVAPVISTYP 780 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 P RD+A +V +P + ++ L++ +T+FDVF+G +G G++S+A + ++ Sbjct: 781 PADRDVALVVPTQVPVAEVTQALREGAGDLLESLTLFDVFEGAQVGAGQRSLAFGLRLRA 840 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T + + D V+ ++T A LR+ Sbjct: 841 ADRTLTAAEANAVRDAAVDLAAQRTGAALRA 871 >gi|297571523|ref|YP_003697297.1| phenylalanyl-tRNA synthetase subunit beta [Arcanobacterium haemolyticum DSM 20595] gi|296931870|gb|ADH92678.1| phenylalanyl-tRNA synthetase, beta subunit [Arcanobacterium haemolyticum DSM 20595] Length = 859 Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 244/863 (28%), Positives = 401/863 (46%), Gaps = 74/863 (8%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL H++ D++ ++ L +GLE E++ + P + KVL++ + + + Sbjct: 6 IDWLASHVEVPEDLTASQLAADLVKVGLEEEEIHAPDVTGPIVVGKVLTLVKEEQKNGKL 65 Query: 63 L---RIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + R+D G H + ++CGA N G V + PG+ +P + + Sbjct: 66 INYCRVDVGSHNDAPGEGKEPVDFPSRGIICGAHNFVEGDYVVVSLPGAVLP-GDFAIAA 124 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDA---------PVGGRLSDYLELSDPII 157 RK G S GM+CS +EL L D I+ L VG + YL L + Sbjct: 125 RKTYGHVSDGMICSARELGLGQDHDGIIVLAHSDDDAAAANLPAVGESVLPYLGLGGETL 184 Query: 158 DVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDL---DDSSL 213 ++++TP+R C +RG+A + + K + + L+++ + P + F + DD+ + Sbjct: 185 EINVTPDRGYCFSMRGVAREYAHSTGAKFTDPGLEENLATDLATPNDSGFAVVVRDDAPI 244 Query: 214 -----CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 F V+GV + +P WM+ RL A G+R IS VD TNYV LD G P H + Sbjct: 245 HGVPGADRFVTRIVRGVNSAAQSPKWMQDRLTAAGMRPISLAVDATNYVMLDLGQPLHAY 304 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-----GRIQSIAGIIGGKHA 322 D ++ L VRRA +GE + LD+ E L P+++VIA R+ +AG +GG Sbjct: 305 DLGKVEAPLVVRRARAGETVTTLDSVERTLDPEDLVIADSCGGEGARVVGLAGTMGGLDT 364 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 D TTD+L+E A +D +++AR + + +++ RFERGVD + P+ +V+ +L+ Sbjct: 365 EVSDETTDILIEAAHFDQVSVARMARRHRLPSEASKRFERGVDPT-LAPIAAQMVAELLA 423 Query: 383 -LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK 441 GGT + N I F +V+RL+G++VP D +RILE +G +V G Sbjct: 424 DFGGGTIDEGVCDVNTVPAIAPIEFATDDVRRLTGLNVPEADIVRILEEIGCTVEGR-GT 482 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKR 500 +V+ WR D+ A VEE+ R+ G D+I S P P L+ +Q R + R Sbjct: 483 LQVTPAPWRPDLVGPAHFVEEVARLVGYDEIASILPTP----RGGAGLTKRQRHQRDMVR 538 Query: 501 VLASRAMMEVVNWSFISK----EQSVLFGGGQRELEIL-NPISADMSNMRTSLLPGLLKA 555 LA + +V+++ F+S +Q + +R +L NP+ + MRTS+L LL Sbjct: 539 ALAEQGWTQVLSYPFVSAGTFDKQLIPAEDSRRSAIVLANPLQDEAPYMRTSILDSLLDT 598 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 NV R+ AIFE S V D G R + + Sbjct: 599 AKMNVARSNPAVAIFESSLVTRPDALVPATTPNVGGRPTDEQLAALAAAMPAQPHHIAGV 658 Query: 616 VDLFDAKA------------DALSVIEPFVSL--DSLRFESGAPSWYHPGRSGIIKTSAE 661 A+A DAL+ ++ V + F + + HPGR + Sbjct: 659 ATPLVAQACADMPAVTWDWRDALAAVDTLVCTLGGKVEFANVDHAPLHPGRGAEASVNGH 718 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 V+GY GE P + F L FEV D + + + V +S+ K D+A Sbjct: 719 -VIGYAGELAPKVCQAFDLPARSIAFEVDADVLLTALSDSPMS--VTPVSAFPAAKEDIA 775 Query: 722 FIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +VD +P+ + ++I+ +++DV +FDV+ G + EGKKS+A + ++ T Sbjct: 776 LVVDADLPSSQVESVIREAAGEILEDVRLFDVYTGDQIPEGKKSLAFALRLRGTDHTLTA 835 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 ++ + RI++ KK A LR Sbjct: 836 EEAASVRKRIIKKTGKKFGAELR 858 >gi|147678284|ref|YP_001212499.1| phenylalanyl-tRNA synthetase beta subunit [Pelotomaculum thermopropionicum SI] gi|146274381|dbj|BAF60130.1| phenylalanyl-tRNA synthetase beta subunit [Pelotomaculum thermopropionicum SI] Length = 667 Score = 303 bits (775), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 223/698 (31%), Positives = 355/698 (50%), Gaps = 58/698 (8%) Query: 134 MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGK-LKEINIS 192 M LP P+G + + L L D I+++ LTPNR DC+ V G+A + VAA LG+ L+ + + Sbjct: 1 MILPPGTPLGKDVKEILGLDDFILELDLTPNRGDCLSVYGVARE-VAALLGRPLRPVEPA 59 Query: 193 CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDI 252 P ESI +++ D++ + LC F +K VR +P WM+QRL+ G+R IS +VD+ Sbjct: 60 YPEMGESIEGQVRVDIEAADLCGRFVGRLIKNVRVGPSPLWMQQRLRFAGIRPISNIVDV 119 Query: 253 TNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ 311 TNYV L+ G P H FD + + VRRA GEKI LD E L+P + I Sbjct: 120 TNYVMLELGQPMHAFDYELLEGGHIIVRRAREGEKITTLDGVERQLAPGMLCITDPSGPV 179 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 +IAG++GG+ T VL+E A ++PI+I R+ K LG+ + + RFE+G+D+ G Sbjct: 180 AIAGVMGGQATEVTGKTASVLLESAFFNPISIRRTSKVLGLRSQASLRFEKGIDIGGCAR 239 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMNSEVKRLSGIDVPIEDSLRIL 428 LI+ + G A +C A + P +KI + V + G+D+P E++ IL Sbjct: 240 ASARAAQLIVEMGAGEA--VCGAVDAYPAPVPEKKIALRPARVNYVLGVDIPKEEAGSIL 297 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQ--VEDK 485 RL F V ++ V+VP+ R DV + DL+EEI R++G +Q+ P L+ +E + Sbjct: 298 SRLQFKVQDAGEELLVTVPTHRVDVSLEIDLIEEIARLHGYNQVPGTLPYGLSTHGIETR 357 Query: 486 RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---------QSVLFGGGQRELEILNP 536 +Q T ++ +LA + EVV +SF S L + + I NP Sbjct: 358 -----EQLFTARIRDLLAGSGLYEVVTYSFTHPRVFDNMNLPPDSPL----RNAVRIQNP 408 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAGIR 592 +S + S MRT LLPGLL+ N R + + A+FE+ V+ E PE + +AA Sbjct: 409 LSEEHSVMRTMLLPGLLEILAGNYSRRVQNGAVFEIGRVFHSRGEQRLPEERPVLAAAAA 468 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDS----LRFESGAPSW 647 + G W+ E +D + K V+E F S+ + R E+ PS Sbjct: 469 GRTQGN------WNTAPRE----MDFYYLKG----VLEKLFGSIGTKAVNFRPETSNPS- 513 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR+ +++ + LG GE HP++ + F L + FE+ L ++ + + + Sbjct: 514 FHPGRTALLEAGG-LELGVLGELHPHVSERFELPEKVVAFEIDLINLLSVSGQPVRYSPL 572 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVA 766 + V+RD+A IV Q IPA + + I+ L+ V +FD++ G+ + G +S+A Sbjct: 573 PRFPA---VERDIAIIVRQGIPAADVFDTIRKAGGDLLRSVHLFDIYCGEQVPRGFQSMA 629 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D ++ ++ I + K A LRS Sbjct: 630 FSLKFLAGDRTLTDVEVSERIEVISRTLAGKFGASLRS 667 >gi|157362925|ref|YP_001469692.1| phenylalanyl-tRNA synthetase subunit beta [Thermotoga lettingae TMO] gi|157313529|gb|ABV32628.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotoga lettingae TMO] Length = 789 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 229/817 (28%), Positives = 409/817 (50%), Gaps = 40/817 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 M WL++++D D + E+I LT GL V V + V V +P + Sbjct: 1 MLVATEWLREYVDIDWTDEEIASKLTIAGLNVANVIDSPIRGKIACGIVHEVSPHPCSEK 60 Query: 60 ---CAILRIDTGKHQEIQV---VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 C + D+ H I +C V V PG+ + + IV I+GI Sbjct: 61 LHVCKVFDGDS-VHTTITSDMNICKGTKVPVAF------PGTTLSDGR-IVEAMDIKGIT 112 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +MCS +EL L + S + ++ + PVG L Y +L ++D+ +TPNR DC+GV G Sbjct: 113 SEVIMCSLQELGLEEKSECVYQIREEIPVGTDLIRYWKLDGKVLDIEITPNRPDCLGVIG 172 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A ++ LK+ ++ S + + + ++D C + ++ V+ +P W Sbjct: 173 VAREMAVLSGRPLKKPSVDYTESDKPVNDMVSVSIEDVDGCPRYCAAFMESVKAVSSPVW 232 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 MR+RL + G+R I+++VD NYV L+ G+P H FD S+IS + VR+A E++L LD Sbjct: 233 MRRRLMSAGIRPINSIVDAANYVMLETGHPVHTFDYSKISSGRIVVRKANKSERVLLLDE 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L +I ++ ++ G++G +G D T +L+EVA ++P+ I ++ +++ I Sbjct: 293 REYSLHGIETLITDGEKVLAVGGVMGTADSGVSDKTDSLLLEVAYFNPVRIRKTSRSMNI 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM-NSEV 411 +D+ YRFERGVD + V+K ++ +I GG A+ + + + P + VF+ +S++ Sbjct: 353 KSDASYRFERGVDPNDVDFVMKRLIKVIEETSGGVAARGFVDKYVHKIPPRTVFLRDSKL 412 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 R+ GID+ IL L F D ++V +P++R D+ + DL+EE+ RIYG ++ Sbjct: 413 SRILGIDIDQSSVEHILSGLDFVTERITDGWKVLIPTFRPDISIEEDLIEEVGRIYGYEK 472 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE- 530 I+ + L + V+ LQ+ R + + ++L + E +N SF S SV+ + E Sbjct: 473 IEGKMLRIP-VKSTGFGELQRFRKK-INQLLIASGFDESINLSFCS--SSVVKKLVKMEP 528 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + + NP+S DM +R SL+ GL+ + N+ R + D +FE++ VY ++ Sbjct: 529 VRLKNPLSEDMDCLRPSLVFGLIDSVAYNLKRQLRDVKLFEIAKVYNFES-------GTV 581 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WY 648 + G+ +G+L D + R V L + K V++ S S++FE ++ Sbjct: 582 CEREKIGLVMTGKLNEDDYTDY-RTVSLLNLKG----VLDELASHLSVQFEVAEKEMPFF 636 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 PGRS I + + V G G + DF+ + E+ L I + R K++ Sbjct: 637 VPGRSAEIFLNDKSV-GVMGMLSGDFNDFYDFKGDVYFMELDLQVI---FENRRIFKQIG 692 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 +LSS V+RD++ + G +V+ +K ++ V V D+++GK + + S+ Sbjct: 693 NLSSFPSVRRDISLLAPVGFNCGKIVSHLKQSSEYVEKVGVSDIYRGKDIPQDVLSITFY 752 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 V+ + + D+++ L ++ V + + N R S Sbjct: 753 VVYRAPDRSLTDEEVNDLFEKTVSEIETRFNLKRRFS 789 >gi|304440488|ref|ZP_07400375.1| phenylalanyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] gi|304370966|gb|EFM24585.1| phenylalanyl-tRNA synthetase beta subunit [Peptoniphilus duerdenii ATCC BAA-1640] Length = 794 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 239/834 (28%), Positives = 409/834 (49%), Gaps = 72/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLKD+++ + +I + L+S G VE ++N E + + K++ + ++PD D Sbjct: 1 MLLPIKWLKDYVNINKKPIEIANKLSSTGSHVESINNFAEDIEKVVVGKIVEITKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G ++ +Q+V GAPNV G + A GS + N++ + ++RG+ES GM+ Sbjct: 61 KLVVCKIDVG-NETLQIVTGAPNVFEGAVVPVALDGSTLA-NDVHIKKGELRGVESNGML 118 Query: 119 CSEKELMLS------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL + + I D +G + D L+L+D ++D+ +TPNR DC+ + Sbjct: 119 CSLEELGYAQSVIPKEARDGIYIFSSDTKIGSDVKDILDLNDEVLDIEITPNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G++ + A L E I +E+I I + ++ C F + V+ +P Sbjct: 179 GMSRETAATFDLPLIEPKIEFKNETENIIDFIGETVVETKKCSRFYTKVLTDVKIEDSPQ 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ L G+R ++ +VD+TN+V L+ G P H +D ++ + VR A GE I LD Sbjct: 239 WIKNYLMLAGVRPVNNIVDLTNFVMLEYGQPLHAYDLDKLDGNIIVRDAKDGEIIKTLDE 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L+ +++VI R+ +AG++GG + +T VL+E A + +I + K LG+ Sbjct: 299 EERALTAEDIVITDRSRVLGVAGVMGGFDSEVTKDTKRVLLEGASFQKRSIRLTSKRLGL 358 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-----KPRKIVFM 407 T++ RFE+GVD I + K V+ + +L + + N K R+I Sbjct: 359 RTEASARFEKGVD----ITLPKIAVNRVAALAEEIGAAKIVGGNYDTLKEEPKEREIKLR 414 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G + IE+ IL RL VPS+R D+E +ADL EE+ R+Y Sbjct: 415 LEKANSLIGHEFTIEEIENILNRLMIETKTVEGGLVAKVPSYRGDLEIEADLFEEVARLY 474 Query: 468 GVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G + I+ +PL LT+ + R +L+ VK +L + E +++SFIS SV Sbjct: 475 GFENIEPKPLFGGLTKGDRPRFRNLEIK----VKEILKAYGYSEFMSYSFIS--PSVFDK 528 Query: 526 GGQRE-------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 E ++ILNP+ + S MRT+L+ +L+ +N R+ Sbjct: 529 LNLEEGSDLLDFIKILNPLGEEYSVMRTTLISNMLEILYKNYSRS--------------- 573 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSD------KSEERCRFVDLFDAKADALSVIEPF 632 + +G G++ I+ G L + S F DL D + L + Sbjct: 574 ------NEVCSGFEFGNTFIKQEGSLPKEVLKLCIGSYNHGDFYDLKDMIVNILWSL--- 624 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 S++ L+F + HPGR+ + + EI LG FGE +P +L FG+ N E+ D Sbjct: 625 -SIEDLKFIRTEVPYLHPGRACDL-YAGEIYLGSFGEVNPIVLKNFGIKNRCLVGELNFD 682 Query: 693 SI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVF 750 I ++ R L +KRD AF++ + I AG L + + N L++D VF Sbjct: 683 KIVELASDNRVYKP----LPKFPAMKRDFAFVISKDIDAGQLEEVARENGSELLEDFKVF 738 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV+ G+ + + KKS+A + + T D ++ + +++VE + K+ + LRS Sbjct: 739 DVYTGEGIDDDKKSIAFSLTFRAEDRTLTDQEVEKVSEKVVEEIEKQFDGKLRS 792 >gi|260063069|ref|YP_003196149.1| phenylalanyl-tRNA synthetase subunit beta [Robiginitalea biformata HTCC2501] gi|88784638|gb|EAR15808.1| phenylalanyl-tRNA synthetase beta subunit [Robiginitalea biformata HTCC2501] Length = 808 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 240/832 (28%), Positives = 397/832 (47%), Gaps = 54/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + WL+ ++ D EK + LT +GLEVE + E+ L + +V S E++P Sbjct: 1 MKISYKWLRQFIEMDWPAEKTAELLTDLGLEVEGITPFESVPGGLKGIVVGEVKSCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D ++ ++D G + +Q+VCGA NV G A G+ + + + KIRG Sbjct: 61 NADKLSLCQVDIGTDKPVQIVCGAHNVAKGQKVPVATIGTTLYTADGEPWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 S GM+C+E E+ L D I+ L DA G ++ L D + ++ LTPNR+D + Sbjct: 121 ASHGMICAEDEIGLGDSHDGILVLDTDAAPGTPCAELFRLEEDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPL--------EIKFDLDDSSLCKGFAMCCVK 223 G+A DL A LK+ IS L + S+ I+ ++ L + + Sbjct: 181 YGVARDLRAG----LKQQKISKELITPSVSNFHVDNRSGRIEVQVEKPELAPRYCGVTIS 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRAC 282 + +P+W+R RL+A+GL I+ +VD TNYV + G P H FDA RI + V+ Sbjct: 237 NLIVQESPDWLRNRLRAIGLSPINNVVDATNYVLHELGQPLHAFDADRIHGKKILVKTVK 296 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +G K + LD +E L ++++I + IAG+ GG + G +T ++ +E A +DP++ Sbjct: 297 AGTKFMTLDGEERILHEEDLMICDAEKPMCIAGVFGGINTGVTMDTRNIFLESAYFDPVS 356 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 I ++ K G+ TD+ +RFERG+D+ + L LI + GG S + P Sbjct: 357 IRKTAKRHGLNTDASFRFERGIDINNVEYALLRAAILIRDIAGGEISSDAVDLYPKKMPD 416 Query: 403 KIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 VF+ E + RL G ++P + + IL L V + + +P +R DV + D++ Sbjct: 417 HNVFLTYEKIYRLVGTEIPRDTVISILASLDIQVKSVTESGLGLVIPFYRVDVRREVDVI 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EEILR+YG + I + +E ++ + + R R LA+ E++ S + Sbjct: 477 EEILRVYGYNNIPDKSQFTASIEPPAGVAPHKLQDRISGR-LAALGFDEILGNSLCNPAH 535 Query: 521 SVLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + L GG + E+ ++NP+S ++S +R LL L A N++R D ++E +Y Sbjct: 536 NALLGGDPEGEVALMNPLSQELSALRRDLLFSGLGAISHNLNRRQQDLRLYEFGQIYSR- 594 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 EG ++ + + +G D E + FD KA V LDSL Sbjct: 595 --EGTQWE----ERERLALLLTGNQHPDHWENTAKPQGFFDLKAVVAHV------LDSL- 641 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLG-----YFGEFHPNILDFFGLSNPICGFEVYLDSI 694 P P + EI +G G HP+IL F + + +Y D Sbjct: 642 --GAGPREEMPVTDQRFSEALEISMGKRAVVRLGSVHPDILRAFDIRQEV----LYADID 695 Query: 695 PISQKKRTKTKKVVHLS-SLHP-VKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFD 751 +R + ++ + HP V+RDLA ++D+ + L ++ +K +++ DV +FD Sbjct: 696 WPLLLQRVQGAEISYTEIPRHPEVRRDLALLLDESVSFRQLHDLALKTNRKILRDVRLFD 755 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+ G L GKKS A+ +Q K T D I +M + + K+ A LR Sbjct: 756 VYTGDKLPAGKKSYALSFFLQDPKKTLADKQIDSVMGSLQKAFEKELGAELR 807 >gi|323466133|gb|ADX69820.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus helveticus H10] Length = 804 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 230/812 (28%), Positives = 401/812 (49%), Gaps = 43/812 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+D L+ D + + +T G+E+ V + E L + KVL + Sbjct: 1 MLVSYNWLQDFLNLDQDPHDLAEKITRTGVEIADVKHPEEGLKKLVVGKVLDCKGVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +D G+ + +Q+VCGAPNV G L + A G+ I N I KIRG+ES GM+C Sbjct: 61 LHLTHVDVGEDEPLQIVCGAPNVAAGELVIVALHGARIAGNEKIKK-GKIRGMESYGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ SD + I P DA V G + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFSDSVVPEEFANGIYVFPEDADVKPGQDIYKALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDL--VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ + K++++ + + L++K D L F + + GV+ Sbjct: 180 EGSAYEVGAIVDQKPKVEDVVLKEDGPDWTDTLDVKVD---EKLAPKFYLRKLTGVKIQP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P+++VI + +AG++GG ++ TTDV++E A++DP + ++ Sbjct: 297 LLNEKEVDLDPNDIVITDGEKPVMMAGVMGGLNSEITAETTDVILESAIFDPTLVRKAAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + KP + Sbjct: 357 RHANRTEASSRYEKGVNWDATEKAINMAAFLLRNDANATVDEGIIKATDTKRKPVVVKTT 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + + G ++ +D ++I +RLGF V + D V VP+ R D+ ADLVEE RIY Sbjct: 417 VSYINHVLGTEISAKDMIKIFDRLGFMVEHDGDDIAVHVPNRRWDIAIPADLVEEAGRIY 476 Query: 468 GVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D +KS +PL E S ++ R +K ++ + +ME +++S S E++V + Sbjct: 477 GYDNLKSTQPL---LAETHGGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYTK 533 Query: 527 GQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEG 583 ++L ++ P+++ S MR +L+ GL+ A N R A+FE VY++D T Sbjct: 534 DPKDLVKVQMPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRVYDHDGGTFNE 593 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 +++AA SG +++ + + VD + K ++ ++ + + +++ Sbjct: 594 HEHLAALY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFTAIGINPEKVVYKA 644 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL--DFFGLSNPICGFEVYLDS-IPISQK 699 HP R+ I + V G G + D + + G+E+ LD IP+ K Sbjct: 645 EGIEGMHPTRTAAIYIDKQHV-GMIGMIAHAVTFADKALRGSELYGYEINLDVIIPMLTK 703 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 T T ++RDL+ +V++ + + N+IK N + + + V DV++G + Sbjct: 704 GMTATPA----PKFPAIERDLSLLVNKDVTNQEVENVIKSNAGKYLTALKVIDVYEGSHI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 GKKS+A + KDT D + MD+I Sbjct: 760 EVGKKSLAYNLTFLNRKDTLTDKVVNNAMDKI 791 >gi|254550655|ref|ZP_05141102.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length = 831 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 255/863 (29%), Positives = 409/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQHRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|239632032|ref|ZP_04675063.1| phenylalanyl-tRNA synthetase beta chain protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066716|ref|YP_003788739.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus casei str. Zhang] gi|239526497|gb|EEQ65498.1| phenylalanyl-tRNA synthetase beta chain protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439123|gb|ADK18889.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus casei str. Zhang] Length = 803 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 225/821 (27%), Positives = 407/821 (49%), Gaps = 36/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D VS E++ D ++ G+EV+ V + +A L + KV+S +P+ D Sbjct: 1 MDVSYEWLKELVDVPVSPEELADKVSRTGIEVDGVKHPDAGLKKIVVGKVVSATPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLHLCQVDVGEETPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDD--------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ S++ + P++ G L + D I+D +TPNR+D +G Sbjct: 120 CALQEIGFSENVVPKPYLNGIYVFNEPLEP--GSDALAALGMHDAILDFEITPNRADALG 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 +RG+A + V A + PL+ P+ + ++ D+ + + + V+ Sbjct: 178 MRGVAWE-VGATYAEKPHFE-EKPLTEGDRPVGDFLSAEVKDAKDAPSYQLRVIDHVKVQ 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TN + L G P H FD +++ S + VRRA +GE + Sbjct: 236 ESPLWLQKRLWLAGIRPINNIVDVTNLIMLAYGQPLHAFDYAKLGSQQIVVRRAKNGEPL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E++L ++VI + ++AG++GG ++ TT V++E A ++P+N+ ++ Sbjct: 296 TTLDGNEHELDDQDIVITNGQVPVALAGVMGGLNSEITPETTTVVIESASFNPVNVRKTA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +++ RFE+G +L + L V+ + L G + ++ +V + Sbjct: 356 LKYNLRSEASSRFEKGTNLADINRALDAAVAWMAELSEGQVAKGTVSPTSVSAEDVVVDI 415 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G D+ + +I E+LGF V F V+VP R D+ KADLVEE+ RI Sbjct: 416 SLDHINHVLGTDLTQQQVTQIFEQLGFDVTESDGLFAVAVPPRRWDIHIKADLVEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 YG D + S LP T + S QQ R R + +L + +V+ ++ S E + F Sbjct: 476 YGFDNLPST-LPTTTMTIGEYTS-QQKRIRRTRHLLEGLGLTQVITYALTSAEAAEQFKL 533 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 ++ +P++ D + +R +++ GLL N R D AI+E ++ T G + Sbjct: 534 QPGLPTKVDSPMTTDHAVLRMNMISGLLNVIKYNQARKETDVAIYEQGRIF---TKTGDQ 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGA 644 I I +G + + + + VD F AK ++ + D +RFE + A Sbjct: 591 VRPTEIEYLGGAI--TGNVVAKDWHQSAKAVDFFYAKGIVTHLLGDYSLADPIRFEATQA 648 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPG++ I ++V G G HP L FE+ LD++ + ++ Sbjct: 649 VAELHPGQAANIFVGDQLV-GILGRLHPAFEHAEHLPATFV-FELDLDALFAAPRQ---- 702 Query: 705 KKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 +K+ + P V RD+A VD+ + ++ I ++ + DVT+FDV+ G + G+ Sbjct: 703 EKIAQPAPKFPAVTRDIALQVDEQVTNDQVMAIFHEHGGAFLQDVTLFDVYAGDHIAAGQ 762 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T +D++ D++ + A +R Sbjct: 763 KSLAYTLTYRRDDQTLTEDEVTQAFDKVKAALQTGIGAAIR 803 >gi|46580937|ref|YP_011745.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. Hildenborough] gi|66773919|sp|Q728S0|SYFB_DESVH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|46450357|gb|AAS97005.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. Hildenborough] gi|311234627|gb|ADP87481.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris RCH1] Length = 798 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 406/827 (49%), Gaps = 64/827 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WL++ + + + ++ D LT +GLE+E++ +A+ P + V+S ER+P+ D Sbjct: 1 MLLSLKWLREFVPFEGTAAELGDRLTMLGLELEEIIRPFDAIEPIVVGHVVSRERHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ + + +VCGAPNV G A G+ +P M++ K+RG S GM+ Sbjct: 61 KLSVCKVDVGQGEPLDIVCGAPNVAAGQRVPVALVGTTMP-GGMVIKKAKLRGQPSHGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L +D IM LP +G RL D L+L + D+++TPNR+DC+ V G+A ++ Sbjct: 120 CSERELGLGEDHDGIMVLPESFRIGARLVDELDLDREVCDIAITPNRADCLSVLGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLE---------IKFDLDDSSLCKGFAMCCVKGVRNNV 229 A PL+ ++ L+ ++ D+ D+SLC F ++G Sbjct: 180 ALA---------FGLPLTMPALDLKEEGADASNALRIDIPDASLCPLFHGRVLEGAAVRK 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P WMR RL AVG+R IS +VD+TNY+ ++ G P H +D ++ + V A GE++ Sbjct: 231 SPAWMRYRLIAVGVRPISNIVDVTNYILMELGQPLHAYDLDLLAGGRIEVSAAREGERLT 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L+ ++++I + +AG++GG D ++ V +E A++ P I ++ + Sbjct: 291 TLDGVERVLTSNDLLIRDGEKPVGLAGVMGGAETEISDKSSRVFLEAAVFRPGTIRKTAR 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 LG+ +++ YRFERGVD + LI L G T IC + ++ + F Sbjct: 351 RLGLSSEASYRFERGVDQVVCTYAMNRAAQLIAGLSGATLRPGICHNEPLPWQAPVLRFR 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + L GI + LERLG V + ++V+ PS R+D E +ADL+EE+ R+ Sbjct: 411 RARGEALLGISLDETFCRETLERLGCKVDAADAADWKVTAPSHRRDFEREADLIEEVARV 470 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFI-SKEQSV 522 G+D I EP+ + +S+ + +K A + E +N+SF+ K+ Sbjct: 471 RGMDTI--EPVLPKVMRPLDRAGAPESKYSFWLRLKHWAAGLGLNEAINYSFVGQKDLDH 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + I+NP++AD + +RT L PGLL+ N+ + A +FEV+H++E D Sbjct: 529 LNLAVDGRIPIMNPLTADQNVLRTELAPGLLQNLRHNIAQGNAGLRLFEVAHIFEADA-- 586 Query: 583 GQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIE---PFVSL 635 + RL + + + + V+ AD ++E F+ L Sbjct: 587 ----------TSDTTARERARLDILVYGSRYDSQWPHVEADADYADIKGIVEHCLAFLHL 636 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + F A HP + + + +G G P I D + + +L + Sbjct: 637 EGATFTLAA---SHPFLMPCVDVAVQGRQVGVIGRVRPEIADAYHARK-----DAWLADL 688 Query: 695 PISQKKRTKTKKVVHLSSL---HPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + + + SL PV+RD+ + G +++ I + L+ V + Sbjct: 689 DLDVLRELHDAARIAFRSLPVYPPVRRDITVAAPGSLQVGAVLDHILGLRLPLLCGVELI 748 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 DVF+ + G+ ++++ ++ + T +D ++ D++ ++V+K Sbjct: 749 DVFEPE--GKDERNLTFRMTFRHASRTLKDAEVDKERDKVAHSLVEK 793 >gi|254518667|ref|ZP_05130723.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium sp. 7_2_43FAA] gi|226912416|gb|EEH97617.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium sp. 7_2_43FAA] Length = 792 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 243/830 (29%), Positives = 413/830 (49%), Gaps = 65/830 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MK +WLKD+++ ++ +++ D LT G VE+V + + + K++ V +PD D Sbjct: 1 MKVPFNWLKDYVEVNIDAKELGDRLTLTGSAVEEVITQGDVIKNVVTGKIVEVTTHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G ++IQ+V A N++ + A S + + I K+RG+ S GM Sbjct: 61 KLKICQVDIGADEKIQIVTAATNMKEEDIVPVALHKSTLADGTEIKK-GKLRGVVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP DAP+G + YL L+ I+D +T NR DC+ + G+A Sbjct: 120 CSEEELGIAGDEPVHGLMILPKDAPLGMDIKKYLGLNKSILDFEITSNRPDCLSIVGMAR 179 Query: 177 DLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + AA L K+ N +SE+I +K ++ DS LC+ + VK V+ +P+W Sbjct: 180 E-TAATLSTSYKMPSFNYEVK-NSENINDNLKVEVKDS-LCRRYMARGVKNVKVMPSPSW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 M++RL G+R I+ +VDITN+V L+ G P H FDA I S + V RA GE + LD Sbjct: 237 MQERLLEAGVRPINNIVDITNFVMLELGEPMHAFDAREIQSGKIVVERAKDGETFVTLDE 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +L + I + ++AGI+GG ++ ++TT+V+ E A +D NI + K L + Sbjct: 297 IERNLDSSFLCIKDGDKTIALAGIMGGLNSEIKEDTTEVIFECANFDGTNIRVNSKKLNL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-V 411 T+S RFE+ +D + +LI L G + I K + ++S + Sbjct: 357 RTESSSRFEKDIDPNLASLAIDRACALICELGCGEVMEGTIDVYTQKKEEGSITVDSNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ ED + L+ L D +++P++R D+ K D+ EE+ RIYG D+ Sbjct: 417 NKFLGTEIAKEDMKKYLDSLDLKTEVVNDDLVINIPTFRIDIAIKEDIAEEVARIYGYDK 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQS-RTRYVKRVLASRAMMEVVNWSFIS---------KEQS 521 I P + +V +R + T V + + + +++SF+S E S Sbjct: 477 I---PTTIFKVSTEREPKYKNEILTEEVINTMIGSGLNQSISYSFVSPKVFDKINLPENS 533 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---EN 578 L + ++I NP+ D S MRT+ + ++++ GRN R +FEV +Y E+ Sbjct: 534 EL----RNVVKIKNPLGEDYSVMRTTTIHSMMESLGRNYSRNNEYARLFEVGKIYIPNED 589 Query: 579 DT--PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 +T P + + G+ C ++DL K +++E L+ Sbjct: 590 ETVLPTEKNILTIGMYGN------------------CDYLDL---KGVVENIVEAL-GLN 627 Query: 637 SLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + F E+ PS YHPG++ + V G GE H ++ + +G+ E+ LD + Sbjct: 628 KVTFAREAENPS-YHPGKTAALMIGKSKV-GVLGEVHLDVSENYGVDVNCYLAELDLDLL 685 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF 753 S + TKK L V RD+A +V+ + + + IK L++ V +FD++ Sbjct: 686 FNSAE---TTKKYKPLPKFPAVTRDIALLVNDEVLVQEIEDTIKKAGGNLVEKVKLFDIY 742 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G + EGKKS+A + + K T D+D+ + D+I+ ++ K A LR Sbjct: 743 KGTQIPEGKKSIAYAIAYRDEKKTLTDNDVNKVHDKILRSLEYKLGATLR 792 >gi|219849337|ref|YP_002463770.1| phenylalanyl-tRNA synthetase subunit beta [Chloroflexus aggregans DSM 9485] gi|219543596|gb|ACL25334.1| phenylalanyl-tRNA synthetase, beta subunit [Chloroflexus aggregans DSM 9485] Length = 860 Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 262/885 (29%), Positives = 437/885 (49%), Gaps = 106/885 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREAL--SPF-------TIVKVLS 51 M+ LSWL++ + D+ +E++ LT G+EV ++ +R + SP + VL Sbjct: 1 MRVPLSWLREFVAIDLPVEELARRLTFGGMEVAQI-HRIGVEGSPLPWDPELIVVANVLE 59 Query: 52 VERNPDLDCAILR-IDTGKHQEIQVVCGAPNV-------RVG--LLGVWAPPGSCI---- 97 V +P+ D +L +D G Q VV GAPN+ R+ L V+A G+ + Sbjct: 60 VRSHPNADRLVLADVDYGAAQPHTVVTGAPNLFPYRDQGRLPHPLKAVFAREGAQLYDGH 119 Query: 98 PENNMIVNV--RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP 155 E +I + R +RG+ S M+CSEKEL LS+D I+ LP DAPVG L DYL + Sbjct: 120 AEGWVITKLKGRPVRGVMSDAMLCSEKELGLSEDHEGILILPDDAPVGMPLRDYL--GEV 177 Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 I+++ LTPN + C+ + GIA ++ A LK + SI K + + LC Sbjct: 178 ILEIDLTPNFARCLSIVGIAREVAALTGAPLKLPDPQVVAEGPSIIGRAKVTVHEPDLCP 237 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F + +GV+ +P WM++RL G+R I+ +VDI+NYV L+ G P+H FDA R++D Sbjct: 238 RFMVGLAEGVKIGPSPFWMQRRLINAGMRPINNIVDISNYVMLEWGQPTHAFDADRVADR 297 Query: 276 -LTVRRACSGEKILALDNQEYDLSPDN---------VVIASDGRIQSIAGIIGGKHAGCD 325 L VR A GE++ LD+++ DL+P +V + G + +IAG++GG + Sbjct: 298 HLIVRLAQPGERLTTLDDRDRDLTPSPESGLSHPPLLVCDATGPL-AIAGVMGGASSEVS 356 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 + TT+VL+E A+W+P+ I R+ ++L + +++ RFERGVD L+ + L+ G Sbjct: 357 NATTNVLLEAAIWEPVQIRRTARSLKLPSEASRRFERGVDYALPPIALRRCLELMRLYAG 416 Query: 386 GT-ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-------SVIG 437 T A+D + ++P I SEV+RL GI + IL RLGF S +G Sbjct: 417 ATIAADFIDVYSRPWQPVTIELPPSEVRRLLGIHLDAHSIAEILGRLGFTCSIQGGSTVG 476 Query: 438 EYDKF------EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE------PLPLT----Q 481 ++ V VPS+RQDV ADL EE+ R+YG D+I S P P+T + Sbjct: 477 DFAILAAEPVVRVEVPSFRQDVTMVADLCEELARVYGYDRIPSTRLADELPPPMTVKAIE 536 Query: 482 VEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 +ED+ R+L + T + L A++ V S E R L+I NP + + Sbjct: 537 LEDQVRDLMVGAGLTELITYSLIDMALVARVQPSEAVPE---------RYLKISNPGTPE 587 Query: 541 MSNMRTS---LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGIRKGS 595 MR S L L R +R++ +FE+ VY G ++++ R+ + Sbjct: 588 HVYMRRSLLPSLAAALALNLRERERSL----VFEIGRVYLPPAEPGKDERWLPDEPRRLA 643 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP----SWYHPG 651 + G + S S +R ++D +D K + E D L F AP +HPG Sbjct: 644 IALAGPRQPESWLSTDR-DWLDFYDLKGIVELLGERLGLSDQLTF---APLTDDERFHPG 699 Query: 652 RSGII----------KTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKK 700 RS ++ + + +G GE HP + ++ P + E+ L+++ I+ Sbjct: 700 RSAVLMLVHKRDSRGRPVDQQPVGVLGEAHPQVRARLEVNVPRVLLAEIDLETL-IAHAG 758 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 + + + S +DL+ + D+ + + +I ++ ++ +T+FD + G + Sbjct: 759 QATYRAI---SRFPASVQDLSIVADETVSEAQIRAVIQRSAGEYLESLTLFDRYSGSQVE 815 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 EGK+S+ ++ + T D+ + + +I+ N+ ++ A +RS Sbjct: 816 EGKRSLTYHLVFRASDRTLLDETLAKIRKKIIGNLERELGATIRS 860 >gi|326382705|ref|ZP_08204396.1| phenylalanyl-tRNA synthetase subunit beta [Gordonia neofelifaecis NRRL B-59395] gi|326198824|gb|EGD56007.1| phenylalanyl-tRNA synthetase subunit beta [Gordonia neofelifaecis NRRL B-59395] Length = 825 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 234/819 (28%), Positives = 391/819 (47%), Gaps = 52/819 (6%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SWL + L D S E+I +G E+E V+ ++ P I +V ++E Sbjct: 1 MRLPQSWLTEVLRAGAPDAAPSTEEIDAGFVRVGFEIEDVEPFPVITGPLVIGRVEAIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++ G+H +VCGA N VG L V A PG+ +P + + RK G Sbjct: 61 LTEFKKPIRFCQVAVGEHAPRDIVCGARNFAVGDLVVVALPGAVLP-GDFAIATRKTYGK 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + +D + I+ L P A G + L L D I+V++TP+R + Sbjct: 120 TSDGMICSVTELGIGNDHSGILVLSPGTAEPGADAREVLGLVDTAIEVNVTPDRGYAFSM 179 Query: 172 RGIALDLVAAGLGKLKEINIS---CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 RG+ +L +A + + P + E P + D DDS + A Sbjct: 180 RGLGRELASAFETPYIDDGLPGAPLPAAVERTPWPVAID-DDSKATRYTARVLTGVDATA 238 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P W+ +RL G+R ISA+VDITNYV ++ G P H FDA +++ + VR A +GE ++ Sbjct: 239 SSPWWIAKRLMVAGIRPISAIVDITNYVMIELGQPLHAFDADKVTGTVRVRAAAAGETLV 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD L P+++VIA D ++AG++GG D TT +L+E A +D + + R+GK Sbjct: 299 TLDGVTRTLDPEDIVIADDSGAIALAGVMGGAATEVTDATTTILLESANFDQVRVFRTGK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFM 407 + +++ RFER VD + +LI+ GG A ++ R T I Sbjct: 359 RHKLSSEAAKRFERLVDPEITAVASDRAAALIVEYAGGQVAGELSDVRVATPPTPPIEID 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +G+ PI + L +G +V GE V+ PSWR D+ ++ADLVEE+LR+ Sbjct: 419 PGLPDATAGVVYPIGTTAARLLEVGCTVEGE-SPLSVTPPSWRPDLRQRADLVEEVLRLE 477 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G++ I P + + L+ Q R R + LA+ +EV+ + F+ + +G Sbjct: 478 GLEDI---PAVVPRATGGTGLTAAQRRRRAIGVGLATDGFVEVLPYPFLPTDVFDTWGLP 534 Query: 528 -----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 ++ + +LNP+ +D + T+LLPGL++ RN+ R D A++ + V + Sbjct: 535 DDDVRRKTVSVLNPLESDRPLLNTTLLPGLMEMAARNIARGRRDLALYTIGQVVVAGD-Q 593 Query: 583 GQKYMAAGIRKGSSGIEGS-------------GRLWSDKSEER-----CRFVDLFDAKAD 624 G A + + S E + G L + E R D +DA Sbjct: 594 GPTVPALDVTRRPSEAEQAALDASLPDQPLHVGVLLTGLREPAGPLGGGRAADAYDAFEA 653 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 A + +L P +HPGR ++ +V+G+ GE HP +L+ GL + Sbjct: 654 ARQIGRAAGVELTLVAAEYLP--WHPGRCARLEVDG-VVVGHAGELHPAVLERTGLPARL 710 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRL 743 C E+ +D++P+ Q + +S+ V +D+ +V Q + A + + ++ L Sbjct: 711 CAVEIDVDALPLRQNLPSP-----QVSAFPAVLQDVNVVVAQDVAAQDVQDALVAGAGEL 765 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 ++ + +FDVF G+ +GEG KS+ + + T +D+ Sbjct: 766 LESIALFDVFVGEQVGEGNKSLTFALTFRASDRTLTEDE 804 >gi|254828582|ref|ZP_05233269.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL N3-165] gi|258600980|gb|EEW14305.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL N3-165] Length = 802 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 231/826 (27%), Positives = 413/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVNAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE E I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKAEDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTANTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLTEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 ++ AG+ G+ I W ++ + VD F K ++ L + Sbjct: 592 LPIEQEHLAGLITGNWHIAD----W----QKTPKPVDFFVLKGIVEGLVNKLGIKSELHW 643 Query: 641 ESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + HPGR+ ++ EI GY G HP + + L FE+ + ++ Sbjct: 644 KQTEKEELHPGRTASLVLEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ + +IK + +L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGGKLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLNAIIR 802 >gi|149372191|ref|ZP_01891461.1| phenylalanyl-tRNA synthetase beta subunit [unidentified eubacterium SCB49] gi|149354958|gb|EDM43520.1| phenylalanyl-tRNA synthetase beta subunit [unidentified eubacterium SCB49] Length = 808 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 243/834 (29%), Positives = 407/834 (48%), Gaps = 57/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLS-VERN 55 MK + +WLK ++ D EK + LT +GLEVE +++ + L + VL+ V+ N Sbjct: 1 MKISYNWLKQFINLDWEAEKTGELLTDLGLEVEGIESFSSVKGGLEGVIVGHVLTCVQHN 60 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + +D G + +Q+VCGAPNV G A G+ + + + KIRG Sbjct: 61 NADKLKVTTVDLGAGEPVQIVCGAPNVAAGQKVPVATVGTTLYDEEGKPWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+C+E EL L I+ L G +SD +++ +D + ++ LTPNR+D + Sbjct: 121 VSMGMICAEDELGLGKSHDGILVLDPSLTPGTLVSDVVDVENDLVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A L + + P +S E+ L+I+ +++D L + + G+ Sbjct: 181 WGVARDLKAGLLQNEVSLELITPSTSKFNVENRTLKIEVNVEDKKLAPRYCGVTISGITV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P+W++ RLKA+GL ++ +VDITNYV D G P H FDAS+IS + V+ +G Sbjct: 241 KPSPSWLQNRLKAIGLTPLNNVVDITNYVLHDLGQPLHAFDASKISGQQINVKTVDAGTS 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD +L ++++I + IAG+ GG +G +NT+ + +E A ++P+++ ++ Sbjct: 301 FTTLDGVVRELDAEDLMICDADKPLCIAGVFGGSDSGVTENTSAIFLESAYFNPVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-YKPRKI- 404 K G+ TD+ +RFERG+D L+ +I + GG I +IT P+KI Sbjct: 361 AKRHGLNTDASFRFERGIDPHTTDYALRVAAIMICDIAGGQ-----ITSDITDVYPKKIN 415 Query: 405 ---VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+N +L G ++ E IL L V + +++P++R DV +AD+ Sbjct: 416 DHQVFLNFDNTTKLIGEEISKETIKSILTSLDIKVNNVTETGIGMTIPAYRNDVTREADV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV-KRVLASRAMMEVVNWSFISK 518 +EEILR+YG + I + K L ++ R V LA+ E++N S + Sbjct: 476 IEEILRVYGYNNINFTQKLNASISGK--LPIEDYEIRNVIGNQLAALGFNEMLNNSLTTS 533 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + L + E + +LNP+S D++ MR S+L L+ N +R + D +FE Y Sbjct: 534 KYLSLSENLKEEHSVTMLNPLSNDLAIMRQSMLFSALEVAAYNSNRKMPDLKLFEFGKTY 593 Query: 577 ENDTP--EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 N + E +K+++ I G E W+ SE F K ++ E Sbjct: 594 HNYSSGREERKHLSVLIT-GKKATEN----WNSPSETSG----FFYIKGIVSAIFEHLGI 644 Query: 635 LDS----LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +D+ L+ + A GI S ++ L G + FGL + + + Sbjct: 645 VDTKEGVLKNDLFA--------EGITINSNKVTLVELGVLRKKVTKAFGLDSEMVYADFK 696 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTV 749 D++ + K KT K+ + VKRD A ++D+++ L N ++ L+ +V++ Sbjct: 697 WDAVLEALAK--KTFKLKSIPKFPQVKRDFALLLDENVTFADLKNTAYQTEKSLLKEVSL 754 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV+ G +L EGKKS A+ +Q K T D I +M+++ K A LR Sbjct: 755 FDVYTGGNLPEGKKSYALSFTLQDEKKTLTDKQIDKIMNKLQMRFEKDFGASLR 808 >gi|296111228|ref|YP_003621610.1| phenylalanine--tRNA ligase, beta chain [Leuconostoc kimchii IMSNU 11154] gi|295832760|gb|ADG40641.1| phenylalanine--tRNA ligase, beta chain [Leuconostoc kimchii IMSNU 11154] Length = 818 Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 236/838 (28%), Positives = 418/838 (49%), Gaps = 64/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALS------PFTIVKVLSVER 54 MK +L+WL ++L+ ++LE + +E V+ E+ + + KV+ V+ Sbjct: 1 MKTSLTWLNEYLNNTINLEPAAVADLAEQVERTSVEINESTTIAKGQDGLIVAKVMRVQP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM--IVNVRKI-- 109 +PD D I +++ G +QVV GAPN+ G L + A G+ I +++ ++ + K+ Sbjct: 61 HPDSDHMVIAQVNVGTSDLVQVVTGAPNIAEGQLVILATVGAHIIKHDTGELITLEKVTL 120 Query: 110 RGIESTGMMCSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 RG +S GM+ + +E+ +D I G L +++P++D L Sbjct: 121 RGQDSYGMLVALQEIGFDNKIAPKNFEDGIHIFTAQDHVKPGDDALVVLGMNEPVLDTDL 180 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCP----LSSESIPLE-IKFDLDDSSLCKG 216 TPNR+D + + G A + G + + ++ P + ES+ E I LDD +L Sbjct: 181 TPNRADMLSMIGTAYEF-----GAMLKQKVTIPDFALVEYESLASEQITVKLDDDALAPK 235 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV- 275 +A+ + V +P W+++RL G+R I+ +VDITNY+ L G P H FD ++++ Sbjct: 236 YALRVINNVTVTDSPLWLQKRLWNAGMRPINNIVDITNYMMLMYGQPIHAFDLDKLTNHE 295 Query: 276 LTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 L +RRA E+++ LD Q L S +++VIA+ +AG++GGK + D T +++E Sbjct: 296 LHIRRAKKDEQLVTLDEQTRQLRSGEDIVIATVDEPLMLAGVMGGKSSEVDRQTKHIVLE 355 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICI 393 A+++P I + + + +++ RFERGV+ L H L L GG A + Sbjct: 356 SAVFNPSLIRATARRHNLHSEASARFERGVNWDNTFTALDHAAQLSDELAGGQIARGQVV 415 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 A + R I V ++ G + + D IL++L F D EV++P+ R D+ Sbjct: 416 ASDSQRSTRTIALSTQRVNQILGTALTVSDITTILDQLAFDYQTHDDYTEVTLPARRPDM 475 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 ADL+EEI R+YG D + LP Q + L+ QQ + R +R++ S + + +++ Sbjct: 476 GIAADLIEEIARLYGYDNLPV-TLPYGQTTPGQ-LTQQQRQIRASRRIMESLGLNQAISY 533 Query: 514 SFISKEQSVLFGGGQ--RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + E++ F + L + P+S+D + R +LL GLL+ NV+ + D A++E Sbjct: 534 VLTTPEKAQQFAENTTAKLLTLDYPMSSDRTTARQNLLAGLLEDVAYNVNHFVRDIALYE 593 Query: 572 VSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 V+ +ND P +++ AGI G+ W +R VD +D K + Sbjct: 594 QGRVFIANEKNDLPTEVEHI-AGILTGNYATS----TWQASKTDRS--VDFYDIKGIVSN 646 Query: 628 VIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 ++ + ++ +R+ + HPG++ I + E+ LG+ G+ HP + L+ P+ G Sbjct: 647 YLDQ-IGVNHVRYVATDRHVNMHPGQTADIY-AGEVYLGFVGQLHPLVTKAQKLA-PVFG 703 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLI 744 FE+ L ++ + KV S + RD A +V+ I T+ ++IK V D+L+ Sbjct: 704 FELNLFAVMSQVQLDVHYHKV---SRFPQMSRDAALLVNADIEHATIESLIKQVSGDKLV 760 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 D+ +FDV+ G L GKKS+A + T++DDD +L + + K T A++ Sbjct: 761 -DIKLFDVYMGDKLPSGKKSLAYTL-------TYQDDDGTLLEAEVNSDFEKVTTALI 810 >gi|300871432|ref|YP_003786305.1| phenylalanyl-tRNA synthetase subunit alpha [Brachyspira pilosicoli 95/1000] gi|300689133|gb|ADK31804.1| phenylalanyl-tRNA synthetase, alpha subunit [Brachyspira pilosicoli 95/1000] Length = 807 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 238/836 (28%), Positives = 408/836 (48%), Gaps = 61/836 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 M+ LSWLK+ ++ D + +E+I +T G E+ ++ P I+ KVL+V ++PD Sbjct: 1 MRIPLSWLKEFVNLDGLEVEEIARNITLSGSEISSIETTGGDIPGVIIGKVLTVHKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ +++ G + +VCGAPNVR + A G+ +P N + + IRG ES+GM Sbjct: 61 DKLSVCKVNVGD-DVLSIVCGAPNVRENIYVPVAMIGAKLP-NGLTIKKASIRGFESSGM 118 Query: 118 MCSEKELMLSDDSA---------SIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNR 165 +CS EL + I +L I D+ +G LS + +D I +V +T NR Sbjct: 119 LCSRTELGYEEIEGVYGIWILDEHIDKLNIEDKDSILGNSLSTIVGSTDHIFNVEITANR 178 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 D + + G A + L K ++I + +S I +++ C + + + Sbjct: 179 GDLVSIIGFARE---CSLVLEKRVSIPSVNTYDSTGGNIDITVENQESCYKYVGRLINNI 235 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSG 284 +P+WM+ RLK G+ I+ +VDITNYV L+ G P H +D ++ D + VR A + Sbjct: 236 TVGPSPDWMQNRLKKCGINPINNIVDITNYVMLEYGQPLHAYDFDKVKDGKIIVRNAKND 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EKI LD +E +L+ + +VIA + +AG++GG +D T ++L+E A +D I + Sbjct: 296 EKITLLDGREINLTDEVLVIADSEKPIGVAGVMGGDSTKIEDTTKNILIESAYFDHIAVK 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT---YKP 401 +S TD+ YRFER +D + L V LI++L A + A+ + ++ Sbjct: 356 KSTIATNTKTDASYRFEREIDHTLTLAALNRAVDLIVTL-DNNAKIVSRAKEVNVKQFEA 414 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADL 459 +IVF VKR G+D+ I +R GF S +GE + +V +P +R D+ DL Sbjct: 415 TRIVFDCGLVKRYLGLDMNKMQVSSIFKRYGFNASALGE-NNLKVDIPFYRHDLTIAEDL 473 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EEI R+YG + + S +P + + + +VK +AS + E +S + Sbjct: 474 IEEIARVYGYNNLDSN-VPHIKCNP---IKTDYADISFVKHRMASYGIYETKQYSLGDSK 529 Query: 520 QSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 G +L ++NP++++M +R + L LL + N + + A+FEV +++ Sbjct: 530 MFKNIGFKDEQLISVVNPLTSEMDVLRPTTLVSLLNSIAYNQNHRHKNGALFEVGNIFYK 589 Query: 577 ENDTPEGQKYMAA---GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 END +K+++A G+ + +LW+ +S R D FD +I + Sbjct: 590 ENDKFVEEKHLSAVMFGLYQ--------EKLWNKES----RAYDFFDMSGVVEELITKDL 637 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + W+ P S I E + G G HP IL F ++ +VY Sbjct: 638 NSTDYNLIPKEHDWFIPTMSADIVIFGEKI-GIIGRIHPKILALFDINT-----DVYFTD 691 Query: 694 IPISQ-----KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVT 748 I I KKR K +++ + V RDLA + D++I ++ I + +I +V Sbjct: 692 INIRYAVELIKKRVKKQQLKDIGKYPAVFRDLALVCDRNIEFSKVIKSISKFNDIIQNVD 751 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 V D + G+ + EGK+S+AI + T R++DI + ++E + + + LRS Sbjct: 752 VVDRYVGEQVKEGKQSIAISITYYDPNKTLREEDINAVESSLLEMLKTRFSIELRS 807 >gi|148822858|ref|YP_001287612.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis F11] gi|148721385|gb|ABR06010.1| phenylalanyl-tRNA synthetase beta subunit pheT [Mycobacterium tuberculosis F11] Length = 831 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 255/863 (29%), Positives = 409/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HPGR + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPGRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ ++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDQLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|306836000|ref|ZP_07468992.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC 49726] gi|304568166|gb|EFM43739.1| phenylalanyl-tRNA synthetase beta subunit [Corynebacterium accolens ATCC 49726] Length = 838 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 232/809 (28%), Positives = 382/809 (47%), Gaps = 53/809 (6%) Query: 16 VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTGK 69 VS + +G E E + E P I +V+ +E + P C + Sbjct: 21 VSAADMDSGFVRVGFETEGYEPIPETTGPLVIGQVVEIEELTQFKKPIRYCQVNVGQANG 80 Query: 70 HQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 E+Q ++CGA N R+ V + PG+ +P + R+ S GMMCS EL L Sbjct: 81 TGELQGIICGARNFRLHDYVVVSLPGAELP-GGFKIAARETYDHISNGMMCSAAELGLGA 139 Query: 129 DSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 + I+ L + VG + LSD DV++TP+R + RG++ ++ ++ + Sbjct: 140 QANGIIVLGEEVADMVGEDARPVIGLSDTDFDVNITPDRGYALSARGLSREIASSFDLEF 199 Query: 187 KEI-------NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRL 238 K++ I E+ I DL + + + F + V G+ P WM + L Sbjct: 200 KDVADDPAVAGIDTSAVPEAEGSLINIDLREETKAQRFGVRKVSGIDPQARTPFWMEREL 259 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G RS++ D+TNYV L G P H FDA+ ++ LTVR A GE+ LD+ +LS Sbjct: 260 MLCGQRSVNVATDVTNYVMLLLGTPMHAFDANEVAGDLTVRNAQEGERFETLDHVTRELS 319 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 ++VVI D IQS+AG++GG H+ D TTDV E A+WDPI +AR+ + + +++ Sbjct: 320 GEDVVICDDNGIQSLAGVMGGTHSEISDQTTDVYFESAIWDPITVARTSRRHKLSSEASR 379 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L +L+ S+ GGT +P+ I + +G++ Sbjct: 380 RFERGVDPAIVEVALDIACALLHSIAGGTIEKGRTLVGEVTQPQAIRLRAEKPSEYAGVE 439 Query: 419 VPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 E + L+ +G +V D +V+ +WR D+ DL+EE+LR+ G++ I P Sbjct: 440 YSRETVISRLKEVGCTVEEGSDSVLQVTPATWRTDISMDVDLIEEVLRLEGLEDI---PT 496 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELE 532 L R L+ Q R R + LA EV+ FI+ + ++G + + Sbjct: 497 VLPTPAGGRGLTPAQKRRRAIGHGLAYAGYAEVLPTPFIANDTFDVWGLAADDARRNTVA 556 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + NP+ +D + + T+LLP L+A GRNV R D A++ + V E + R Sbjct: 557 VQNPLESDKAILATTLLPATLEALGRNVARGRKDLALYGLQQVAFKRA-ESSPMPSVAQR 615 Query: 593 KGSSGIE----------------GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 G +E +G++ + R DA A ++ LD Sbjct: 616 PGDEVVEELLRTLPEQPLHVATVATGKMEHEGPWGEGRDYTYADAIESA-RLVARAAGLD 674 Query: 637 SLRFESGAPSWYHPGRSGIIKTS-AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + E+ +HPGR IK + A+ V+GY GE HP +L+ L C E+ ++P Sbjct: 675 -IEVEAADHLPWHPGRCAAIKVAGADDVVGYAGELHPQVLEALNLPPRTCAMEIDTTALP 733 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQ 754 ++++ LS+ + +D+A +VD+ IPA + + + LI+ V +FD+F+ Sbjct: 734 LTERFPAPV-----LSAFPALHQDIALVVDEDIPAEKVRATVEEGAGDLIESVDLFDIFR 788 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 G+ LG+GKKS+A Q+ + T D+++ Sbjct: 789 GEQLGDGKKSLAFQLQFRAADRTLTDEEV 817 >gi|254830024|ref|ZP_05234679.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes 10403S] Length = 802 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 231/826 (27%), Positives = 413/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKVYAEGIYVLPAHVETGVNAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE E I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKAEDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTANTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLTEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 ++ AG+ G+ I W ++ + VD F K ++ L + Sbjct: 592 LPIEQEHLAGLITGNWHIAD----W----QKTPKPVDFFVLKGIVEGLVNKLGIKSELHW 643 Query: 641 ESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 + HPGR+ ++ EI GY G HP + + L FE+ + ++ Sbjct: 644 KQTEKEELHPGRTASLVLEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ + +IK + +L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKDTDHAAISQVIKEHGGKLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + +K NA++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLNAIIR 802 >gi|47092021|ref|ZP_00229815.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|47019737|gb|EAL10476.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes str. 4b H7858] gi|328466617|gb|EGF37752.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes 1816] Length = 802 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|309810999|ref|ZP_07704797.1| phenylalanine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] gi|308434963|gb|EFP58797.1| phenylalanine--tRNA ligase, beta subunit [Dermacoccus sp. Ellin185] Length = 843 Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 246/855 (28%), Positives = 396/855 (46%), Gaps = 62/855 (7%) Query: 1 MKFTLSWLKDHLDTDVSLE--KICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ + WL++++D ++ L +GLE E + P + +VL+ + P+ Sbjct: 1 MRVPIEWLREYVDVPEGATGLQVAADLVRVGLEEEAIHGGGVTGPLVVGRVLT--KTPEE 58 Query: 59 D--------CAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 C + D E Q +VCGA N VG V A PG+ +P ++ RK Sbjct: 59 QKNGKVINWCTVDVGDANGTGEPQGIVCGAHNFEVGDTVVVALPGAVLP-GGFTISARKT 117 Query: 110 RGIESTGMMCSEKELMLSDD-SASIMELP----IDAPV---GGRLSDYLELSDPIIDVSL 161 G S GM+C+ EL L DD S I+ LP +DA G L L ++V++ Sbjct: 118 YGHLSAGMICAADELGLPDDGSGGIILLPQRLGVDASSLTPGQDALPLLGLDRETVEVNV 177 Query: 162 TPNRSDCIGVRGIALDLV-AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 TP+R C +RGIA + A G ++ + + L +DD +G C Sbjct: 178 TPDRGYCFSMRGIAREYGHATGASFTDPVDALTTRAPAANDLGYPVRVDDPQGLRGAVGC 237 Query: 221 ------CVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 V+G+ N P W+ + VG+RSIS VD+TNYV + G P H FD + Sbjct: 238 DRYVARVVRGIDPNAPVPAWLATAVTEVGMRSISLPVDVTNYVMMALGQPLHAFDLGALG 297 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVL 332 + + VRRA +GEK+ LD E L ++++I G R ++AG++GG + D+TTDVL Sbjct: 298 EEIVVRRARAGEKLTTLDGVERTLFAEDLLITDGGARPLALAGVMGGSDSEVSDSTTDVL 357 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A +DP+++AR+ + + +++ R+ERGVD Q + V L++ GG D Sbjct: 358 IEAAHFDPVSVARTARRHKLGSEASKRYERGVDPQIAAAAAQLAVELLVQYGGGVVDDGV 417 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 + T P+ I F + RL G+ ++ L+ +G V + V+ P+WR D Sbjct: 418 TDLDTTRAPQPIDFDPQQPTRLVGVAYSDDEVAESLDAVGCRVERNEPLWSVTPPTWRPD 477 Query: 453 VEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 + DLVEE+ R+ G D I S P PL R L+ Q R V LA + E++ Sbjct: 478 LTSGPDLVEEVARLRGYDAIPSVLPRPLA----GRGLTASQRYRRNVANALAMAGLTEII 533 Query: 512 NWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + F+S + G + + + NP+S ++ +RTS+L ++ + RNV R D Sbjct: 534 SLPFVSDDVHDKLGFAADDARRTSVRLTNPLSDELPLIRTSVLATMMDSLKRNVARGFKD 593 Query: 567 FAIFEVSHVYEND------TPEGQKYMAAGIRKGSSGIEGSGR--LW--SDKSEER---- 612 A+FE+ V + +P G + S + R W + SE + Sbjct: 594 VALFEIGLVVAGEAGQAPTSPVGVHPAPEVLDAIRSAVPAQPRHVAWVAAGDSERKGWWG 653 Query: 613 -CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 R D DA A AL I + +D L E + +HPGR I V+G GE H Sbjct: 654 AGRGADWSDAIAVALQ-IGRVLGVD-LTIEQAQVAPFHPGRCASIALPDGTVIGAAGELH 711 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P ++ F L G E+ LD++ ++ + H D+A +VD +PA Sbjct: 712 PKVVAAFSLPARTVGGELDLDALSAYAERPGVASSIATFPQAH---SDVALVVDASVPAA 768 Query: 732 TLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + +++ ++ V +FD++ G +GEGKKS+A ++ + + T D++ D Sbjct: 769 RVETALRSGAGEHLESVALFDIYTGDQVGEGKKSLAYRLFFRSPERTLTTDEVNAARDAA 828 Query: 791 VENVVKKTNAVLRSS 805 V V + A LR + Sbjct: 829 VRAVDESVGASLRGA 843 >gi|94986660|ref|YP_594593.1| phenylalanyl-tRNA synthetase subunit beta [Lawsonia intracellularis PHE/MN1-00] gi|94730909|emb|CAJ54272.1| Phenylalanyl-tRNA synthetase beta subunit [Lawsonia intracellularis PHE/MN1-00] Length = 803 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 225/828 (27%), Positives = 410/828 (49%), Gaps = 62/828 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV------KVLSVER 54 M +L+WL++ + + + +++ + LT +G E+E + ++P+ + KV+ E+ Sbjct: 1 MLLSLNWLREFVPYEGTAQELGNRLTMLGFELEDI-----ITPYNNIQSIIVGKVVHCEK 55 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P+ D +I ID G+ + V+CGAPNV G A G+ +P+ +I + K+RGIE Sbjct: 56 HPEADKLSICTIDIGQETLLHVLCGAPNVATGQKVPVATIGTTMPDGTIIKKI-KLRGIE 114 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CSEKEL +DD + I+ LP + VG L + L L I+ +S+TPNR DC+ + G Sbjct: 115 SFGMICSEKELEFTDDHSGILVLPEELTVGTSLVNALNLDTEILKISITPNRGDCLSILG 174 Query: 174 IALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ A GL + I + +C + + V+ + +P Sbjct: 175 LAREISTAFGLPLFPQQPIHFLEVEPDFSKNWSVHVSSKKVCSSYLLRLVENISVQKSPL 234 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL-ALD 291 +R RL ++G+R IS +VDITNY+ L+ G P H FD I T E+IL LD Sbjct: 235 HIRHRLHSMGIRPISNVVDITNYILLELGQPLHAFDKDLIEGNTTYISLAKEEEILCTLD 294 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + + L+P +++I D + ++AGI+G +++ + T ++L+E A+++P I ++ + LG Sbjct: 295 GKNHTLTPSDLIIYDDTKPIALAGIMGCQNSKVTEATKNILIESAVFNPSIIRKTARRLG 354 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-----IVF 406 I T+S YRFERGVD G + L + +I+ GG N Y+P I Sbjct: 355 ISTESSYRFERGVDSSGAMYALNKAIKMIIDTSGGEVK----IGNAHYEPTPYKQPIIQL 410 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S +++++G +P + L +LGF + + +++++PSWR+D++ DL+EE+LR Sbjct: 411 DTSNIQKVTGTSIPSNFCINTLTQLGFEIDTSNCNIWDITIPSWRKDIQHSVDLIEELLR 470 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFI-SKEQS 521 YG++ I E LP + ++ L +S+ +++ +V + E N+SFI + E Sbjct: 471 FYGLNTIPEE-LPCI-YKSLNDIGLPESQYQFITKVKHWACGIGLNETENYSFIGNNELD 528 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 +L L I NP++ + + +RTSL+P LL NV +FEV++ Y + Sbjct: 529 LLKFSNNTRLIIYNPLTEEQNVLRTSLIPSLLNNVKYNVAHGNTGLRLFEVANTYTFEAI 588 Query: 582 EGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + A + K GI G L W S + D L ++E F++ Sbjct: 589 --SETTAKEVLK--LGIVMHGDLFDTGWPQPSTSA--------SYLDLLGIVEHFITFLH 636 Query: 638 L----RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L ++ ++ +PG I +GY G +I I E+ L++ Sbjct: 637 LPPLTTSQTDTYAFLNPGVDLFIHGKK---IGYIGCISQHIAKNCHTHKEIWITELDLET 693 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 + K T K + ++P RD+ I+ + + + + +D +++++ + D Sbjct: 694 LAHLYKNIKITFKPL---PIYPSSYRDMTLIITSNTSISNIKSYMDLIDIPILENIFLLD 750 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 +F+ ++ ++ + + + K T +D +I + +I E + + N Sbjct: 751 IFRPNNI---EQHCTFRFVFRSAKKTLKDSEIDLAYKKITEILSNQCN 795 >gi|300764371|ref|ZP_07074365.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|300515023|gb|EFK42076.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL N1-017] gi|328475242|gb|EGF46023.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes 220] gi|332311607|gb|EGJ24702.1| Phenylalanyl-tRNA synthetase [Listeria monocytogenes str. Scott A] Length = 802 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|254364499|ref|ZP_04980545.1| phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium tuberculosis str. Haarlem] gi|134150013|gb|EBA42058.1| phenylalanyl-tRNA synthetase, beta chain pheT [Mycobacterium tuberculosis str. Haarlem] Length = 831 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 255/863 (29%), Positives = 409/863 (47%), Gaps = 93/863 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 SGE + LD E L +V+I D +I G++G ++TDVL+E A+WDP Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVMGAASTEVRADSTDVLLEAAIWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARN 396 ++R+ + L + +++ R+ER VD + L L+ + GG S Sbjct: 352 AVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGGEVSPTLTDWRGDPPC 411 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 + P I R++G+ P + R L ++G V + D V+ PSWR D+ + Sbjct: 412 DDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDTLTVTPPSWRPDLRQP 471 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEE+LR+ G++ I S L R L+ Q R R + R LA +E++ F+ Sbjct: 472 ADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRSLALSGYVEILPTPFL 528 Query: 517 SKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 L+G + +LNP+ AD + T+LLP LL+A RNV R + D A+F Sbjct: 529 PAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEALVRNVSRGLVDVALFA 588 Query: 572 VSHVYE--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG 602 ++ V + P +++A AG+R+ G G G Sbjct: 589 IAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAVLAGLRE-PRGPWGPG 647 Query: 603 R-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 R + + + E R + A+A + V +LR P +HP R + E Sbjct: 648 RPVEAADAFEAVRII----ARASRVDV--------TLRPAQYLP--WHPCRCAQVFVG-E 692 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 +G+ G+ HP +++ GL C E+ LD+IP S +S V +D++ Sbjct: 693 SSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCSAPLPAP-----RVSPYPAVFQDVS 747 Query: 722 FIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +V IPA + + ++ L++D+ +FDVF G +GE +KS+ + + T + Sbjct: 748 LVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSLTFALRFRAPDRTLTE 807 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 DD D V++ ++ AVLR Sbjct: 808 DDASAARDAAVQSAAERVGAVLR 830 >gi|120436679|ref|YP_862365.1| phenylalanyl-tRNA synthetase subunit beta [Gramella forsetii KT0803] gi|117578829|emb|CAL67298.1| phenylalanyl-tRNA synthetase subunit beta [Gramella forsetii KT0803] Length = 808 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 240/833 (28%), Positives = 416/833 (49%), Gaps = 55/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + EK + LT +GLEVE + + ++ L + VLS E +P Sbjct: 1 MKISYNWLKQFIKLPEESEKTGELLTDLGLEVEGISSFQSVKGGLEGIVVGHVLSCEAHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGI 112 + D + +++ G +E+Q+VCGAPN+ G A G+ + + + + KIRG Sbjct: 61 NADRLKLTKLNIGNGEEVQIVCGAPNIGAGQKVPVATIGTVLYDEKGESWEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+CSEKEL L IM + + G +++D E+ +D + ++ LTPNR+D + Sbjct: 121 ASYGMICSEKELGLGQSHEGIMVMDNELVPGTQVADIFEVENDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSS---ESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A +GK E+ I+ +SS +S L+I+ +DDS+L + + V+ Sbjct: 181 WGVARDLKAGYQQMGKHLEL-ITPSVSSFHVDSRSLKIQIKVDDSNLAPRYCGVTLSEVK 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ RLKA+GL + +VD TN+V + G P H FDA +I+ + + V+ G Sbjct: 240 VGESPKWLQNRLKAIGLTPKNNVVDATNFVMHELGQPLHAFDAGKIAGNEINVKTLKGGT 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K LD E +L ++++I + IAG+ GG +G +NTT + +E A ++P+++ + Sbjct: 300 KFTTLDEVERELHEEDLMICDAEKPLCIAGVFGGIGSGVTENTTQIFLESAYFNPVSVRK 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + K I TD+ +RFERG+D+ + LK LI + GG SDI + ++ Sbjct: 360 TAKRHAINTDASFRFERGIDINSVEFALKRAALLITEIAGGEITSDIDDLFFKKIEDFQV 419 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEI 463 +V +L G ++ E IL L V + +++PS+R DV+ ++D++EEI Sbjct: 420 FLTFEKVNKLIGENLEEETIKSILASLEIRVNNVTETGMGLTIPSYRVDVQRESDVIEEI 479 Query: 464 LRIYGVDQIK-SEPLPL-----TQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 LR+YG + IK + L L ++ ED + NL Q + +A+ + ++ Sbjct: 480 LRVYGYNNIKFGDKLSLSVANSSKFEDYKIQNLIANQLIGQGFYETMANS--LTTAKYNR 537 Query: 516 ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +S+E + ++E+LNP+S D+S +R S+L L+A N++R + IFE Sbjct: 538 LSEELK-----DEYQVEMLNPLSQDLSVLRQSMLFSGLEAISYNINRKRNNLKIFEFGKT 592 Query: 576 YEN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E K++ I SG S+ + F K S+ E + Sbjct: 593 YHSFVGGREENKHLTLFI---------SGERTSESWNSVTGNGNFFYLKGAITSIFEK-L 642 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 L L+ ++ + G I A++V FG +IL F + + + D Sbjct: 643 GLSDLKSKAAKSDIFSEGLQ-ISGKKAKLV--QFGVVKRSILKNFDIEQEVVFADFNWDE 699 Query: 694 I--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + + Q+K++ + + V+RD A ++DQ + + I + + +++ V +F Sbjct: 700 VIDAVRQQKKSFSS----IPKYPSVRRDFALLLDQSVSYDEIEQIARQTEKKMLTKVNLF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV++GK+L EGKKS A+ + Q T D + +M ++ K+ A LR Sbjct: 756 DVYEGKNLPEGKKSYAVSFVFQDEHKTLTDKQVDKMMSKLQYRFEKELKAELR 808 >gi|254991831|ref|ZP_05274021.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J2-064] Length = 802 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETNLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|300088326|ref|YP_003758848.1| phenylalanyl-tRNA synthetase subunit beta [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528059|gb|ADJ26527.1| phenylalanyl-tRNA synthetase, beta subunit [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 812 Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 243/845 (28%), Positives = 408/845 (48%), Gaps = 76/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ +SWLKD++D + ++++ + LT G EV V + S + +V +VE +P+ D Sbjct: 1 MRVPISWLKDYVDITIPVKEVAEKLTLAGNEVSSVTSSVPDWSGIVVAEVTAVESHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIRGI 112 ++ ++TG ++ +VVCGAPNV VG +GV G E + V IRG+ Sbjct: 61 RLRLVTVNTGAEEQPKVVCGAPNVAVGQKVAFAGVGVRLVDGHSGKETELKPAV--IRGV 118 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 ES GM+ SEKEL LSDD I+ L VG L++ L D ++++ +TPNRSDC+ + Sbjct: 119 ESRGMVLSEKELGLSDDHEGILVLDSAVAVGTPLANVL--GDQVLEIDVTPNRSDCLCIT 176 Query: 173 GIALDLVA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A G ++ ++ P S + + ++ LC + V+GVR +P Sbjct: 177 GIAREVAAVTGQNGIRLPEVTYPESETPVTDSLTVEIQAPDLCPRYTATVVRGVRVGPSP 236 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 +W+++RL +G R I+ +VDITNYV L+ G P H FD I + VRRA GEK L Sbjct: 237 DWLQKRLTDMGQRPINNIVDITNYVMLEYGQPLHAFDLKNIRGSKIIVRRAEDGEKFTTL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+ E L+ D ++IA R ++AG++GG ++ D+T D+++E A + ++ + L Sbjct: 297 DDVERTLTRDTLMIADAERSIAVAGVMGGANSEVADDTVDIVLESANFKASSVHYTSHRL 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK----IVF 406 +++++ RFER ++ + LK L+ + GG A I Y +K I+ Sbjct: 357 KLVSEASTRFERNLNPEMPPHALKRATQLLTEIAGGQADAGIID---VYPGKKYAVGILV 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE------------VSVPSWRQDVE 454 + ++ G R L+ LG + E + E V P WR D+ Sbjct: 414 AFDHINKILGTRHDFGPITRALKSLGITWYVENNDEEDFGMPSGTQLLRVYQPWWRTDIN 473 Query: 455 EKADLVEEILRIYGVDQIK----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D++EE+ RI G D++ S P+P KR + + L E+ Sbjct: 474 IAEDVIEEVARILGYDKLPTRQLSGPIP------KRVGPAILGFKKLFRMALVGYGFQEM 527 Query: 511 VNWSFISKE--QSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + S S++ + G G R + +LNP+S++ MRT+L LL A N Sbjct: 528 QSLSLTSEDAMRRARTDGELGGRPVRLLNPLSSEQEIMRTTLRSSLLAAVSANRRYETGG 587 Query: 567 FAIFEVSHVYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +FEV VY N + M G+ G + G W ++ R D +D K Sbjct: 588 MRLFEVGRVYTAGNTQLPTETEMVCGVIAGEAEPAG----W----QQGKRGFDFYDIKG- 638 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPG-RSGIIKTSAE-----IVLGYFGEFHPNILDFF 678 ++E + + ++ PG R G+ AE + G GE HP + F Sbjct: 639 ---LVETILGRMQVNYKIAVSQ--DPGLRPGV---QAEFSIDGVPFGVIGEVHPRVAANF 690 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 ++ + FE+ D + QK R + L V RD+A +++ + +++++ Sbjct: 691 DVTETLYLFEI--DLAVLMQKVR-PGRAYEPLPRYPAVMRDIALVLESAVSHQQVLDVLS 747 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 L+ DV++FDV++G+ LGEG+KS+A ++ Q ++T D+ + +M I+ + + Sbjct: 748 AFS-LLRDVSLFDVYEGQQLGEGRKSLAYRLTFQSAEETLTDEKVDAVMAEIISTLGSEL 806 Query: 799 NAVLR 803 A LR Sbjct: 807 GAKLR 811 >gi|296394201|ref|YP_003659085.1| phenylalanyl-tRNA synthetase subunit beta [Segniliparus rotundus DSM 44985] gi|296181348|gb|ADG98254.1| phenylalanyl-tRNA synthetase, beta subunit [Segniliparus rotundus DSM 44985] Length = 829 Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 246/853 (28%), Positives = 400/853 (46%), Gaps = 73/853 (8%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN 55 MK SWL L D S +++ + L +G EVE + P + KVL VE Sbjct: 1 MKAPYSWLVKALSEDNPGFSASPKQLSEALVRLGFEVEDIHEPALAGPIVVGKVLDVEEL 60 Query: 56 PDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + I +D G+ +VCGA N G L V A PG+ +P + I + RK G Sbjct: 61 AEFKKPIRFCTVDVGEDSPRGIVCGATNFAPGELVVVALPGAVLPGDFAIAS-RKTYGRV 119 Query: 114 STGMMCSEKELMLSDDSASIMELP-IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CS EL LS + + I+ LP A G L L+D + D+ +TP+R + +R Sbjct: 120 SDGMICSAAELGLSGEHSGILVLPDGTARPGTDAVPALGLADAVFDLDITPDRGYALSIR 179 Query: 173 GIALDLVAAGLGKLKEINISC--------PLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 G+A DL A GLG L +++ P +SE P+ + ++ G+++ + G Sbjct: 180 GLARDL-AIGLG-LAHTDLAARAAHPQAVPSASEGWPIAVS----ATAPLTGYSVLELHG 233 Query: 225 VRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + + A P W+ L G RS+ +VDITN V ++ G P H FDA ++ + VR A Sbjct: 234 IDPSAASPWWITSLLAKSGFRSLGLVVDITNLVMIELGQPLHAFDADKLCGTVQVREARD 293 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ++ LD + L ++V+A D ++AG++GG+ +TT VL+E A +DP Sbjct: 294 GETLVTLDGVKRVLDAKDLVVADDSGPIALAGVMGGESTEVSSSTTRVLLEAASFDPSRT 353 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + LG+++++ RFERGVD L LI+ L GG AS +P Sbjct: 354 THTSRRLGLVSEASRRFERGVDPLLAPVALARAAQLIVKLAGGEASPFRSEVLRKSEPTP 413 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 I+ R +G+ P + R L +LG +V G+ + V PSWR D+++KADLVEE+ Sbjct: 414 IIMPTDLPDRTAGLSYPPGAAHRRLTQLGCTVWGDRE-LVVFPPSWRPDLKQKADLVEEV 472 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 LR+ G+D+I S L + + L + Q R + LA ++V F S S + Sbjct: 473 LRLEGIDRIPSL---LPKATAGKGLHVAQRLRRKIGSALAEEGFLQVPVSPFFS---SAV 526 Query: 524 F--------GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA---IADFAIFE- 571 F G ++ + + NP + + T+L+PGLL RN+ R +A F+I + Sbjct: 527 FDDWNLPESAGRRKTVRLANPQDSAKPELATTLMPGLLDVMARNISRGMSDLAVFSIAQV 586 Query: 572 ---------VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 + + + P + A R + + L + R K Sbjct: 587 VGAALKPAPIPPIRADRPPSVEALRALSERVPVQPVHLAVALCGN------RIPPGPWGK 640 Query: 623 ADALSVIEPFVSLDSLRFESG----------APSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 A+ + F+ D L +G AP +HPGR ++ V G GE HP Sbjct: 641 GRAVEPSDIFMVGDILARAAGVKMTRKTAHHAP--WHPGRCAYLQAGPWTV-GIAGELHP 697 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 +L+ GL C E+ + ++ S + + + +S+ PV++D+A V + +PA + Sbjct: 698 GMLEKAGLPPGTCFLELNISAL-GSGGFEEQRRPIPPISTYPPVRQDIAVTVAKSVPASS 756 Query: 733 LVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + ++ L++ + +FDV+ G GEG+KS+A + + T +DD + + Sbjct: 757 VERALREGAGELLEGIRLFDVYSGPQAGEGRKSLAYALTFRAPDRTLTEDDASAAREAAL 816 Query: 792 ENVVKKTNAVLRS 804 VK+ A LR+ Sbjct: 817 AEAVKRCGAELRA 829 >gi|290893294|ref|ZP_06556280.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] gi|290557102|gb|EFD90630.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071] Length = 802 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 231/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPEHVETGVSAVTLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT D+ N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGDVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVL 523 RIYG D+I P+ L LS Q R ++ L + + + +S S K+ + L Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSQKDATRL 531 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD+ + +IK + +L+ ++ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGGKLLANIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ +++VE + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLHAIIR 802 >gi|298530057|ref|ZP_07017459.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] gi|298509431|gb|EFI33335.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfonatronospira thiodismutans ASO3-1] Length = 798 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 194/593 (32%), Positives = 313/593 (52%), Gaps = 23/593 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 M +LSWL++ S++++ LT +GLEVE+ V L+P + +V+ ++P D Sbjct: 1 MLLSLSWLREFTPYKGSIDELSHRLTMVGLEVEEIVRPFTHLAPMVVGRVVEKRQHPGAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +DTG + + +VCGAPNV+ G A G+ +P ++ KIRG S GM+ Sbjct: 61 KLSLCSVDTGSGESLSIVCGAPNVQAGQNVAVALEGTELP-GGQVIKKSKIRGETSQGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE EL L D + IM L G L L+L + ++D+ +TPNR DC+ V G+A ++ Sbjct: 120 CSETELELGQDPSGIMVLDDSLVPGTGLCQALDLEEFVLDIGVTPNRPDCLSVLGLAREV 179 Query: 179 VAAGLGKLKEINISCPL------SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A L ++ + P S P E+ D++D S C + + G +P+ Sbjct: 180 AA-----LFDLPLYKPDPALQEDKSRHCPDEVHIDIEDPSGCPLYQARIISGCSIKPSPD 234 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALD 291 WMR RL AVG+R I+ +VDITNYV L++G P H FD + + V R+ G K LD Sbjct: 235 WMRYRLMAVGVRPINNIVDITNYVMLEQGQPLHAFDRHLLEGHKIRVDRSRPGFKFTTLD 294 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE +L+ +++I + ++AG++GG + +D +T+VL+E A+++P++I ++ + LG Sbjct: 295 QQERELNDRDLLIWDSEKPVALAGVMGGANTEINDQSTEVLLECAVFNPLDIRQTARRLG 354 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMNSE 410 + ++S +RFERGVD L L+ L G + A KP ++ F Sbjct: 355 LHSESSFRFERGVDQANAPFALDRAAKLMSELGLGRVYQGVSRAEPRPCKPVQVYFRRER 414 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L +DV R+L LG V E +V+VPS+R D+ + DL+EEI RIYG+D Sbjct: 415 ANSLLALDVDQNYCRRVLTSLGCEVQEEGGGMQVTVPSYRPDITREVDLIEEIGRIYGLD 474 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + P L +V+ + S R+ +K+ + EV+N+SF+ G Sbjct: 475 KT---PEHLPKVQKSLHQEAWDSEYRFLGDIKQWARGLGLQEVINYSFVGMSDLDFLGVP 531 Query: 528 -QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + +++ NP+S + MRT LLPGLL+ N+ + +FEV+ +E D Sbjct: 532 LEGRVKVFNPLSEEQDVMRTHLLPGLLQTLKHNLGQGNTRLKLFEVARSFEQD 584 >gi|227833178|ref|YP_002834885.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium aurimucosum ATCC 700975] gi|262184164|ref|ZP_06043585.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium aurimucosum ATCC 700975] gi|227454194|gb|ACP32947.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium aurimucosum ATCC 700975] Length = 837 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 253/847 (29%), Positives = 393/847 (46%), Gaps = 93/847 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + W+ L T +VS E++ +G E E + E P I +V+ +E Sbjct: 1 MLISQDWVTRLLGTANSGWNVSAEELDSGFVRVGFETEGYEALPETTGPLVIGQVVEIEE 60 Query: 54 ----RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + P C + TGK Q I +CGA N R+ V + PG+ +P + Sbjct: 61 LTQFKKPIRYCQVNVGQANGTGKLQGI--ICGARNFRLNDYVVVSLPGAELP-GGFKIAA 117 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMEL--PIDAPVGGRLSDYLELSDPIIDVSLTPN 164 R+ S GMMCS EL + I+ L + +G + LSD + DV++TP+ Sbjct: 118 RETYDHISNGMMCSAAELGFGPKADGIIVLGEEVADKIGEDARPIIGLSDTVFDVNITPD 177 Query: 165 RSDCIGVRGIALDLVAA---GLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGF 217 R + RG+ ++ +A + + + + ++P I DL + + + F Sbjct: 178 RGYALSARGLTREIASAFDVAFPDVAQDPSVAGIDTSAVPGPKGELIAVDLREETKAQRF 237 Query: 218 AMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 + V G+ P WM + L G RS++ D+TNYV L G P H FDA+ +S L Sbjct: 238 GLRKVSGIDPAARTPFWMERELMLSGQRSVNLATDVTNYVMLLLGAPMHAFDANVVSGDL 297 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VR A GE LD+ + +LS +VVI D IQS+AG++GG + + TTDV E A Sbjct: 298 VVRNASEGEMFETLDHVKRELSTGDVVICDDNGIQSLAGVMGGTTSEISEMTTDVYFESA 357 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 +WDPI +AR+ + + +++ RFERGVD + L +L+ + GGT + Sbjct: 358 IWDPITVARTSRRHKLSSEASRRFERGVDPAIVEVALDVACALLQQIAGGTIEEGRTLVG 417 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 K I ++ +G+ E ++ L +G V GE ++ V SWR D+E Sbjct: 418 DVAKREPITLRAAKPSEYAGVGYSRETVVKRLTEVGCEVSGE-EELSVVPASWRTDIEMD 476 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+EEILR+ G++ I P L R L+ Q R R + LA EV+ FI Sbjct: 477 VDLIEEILRLEGLEDI---PTILPTPVGGRGLTPAQKRRRAIGHALAYAGYAEVLPSPFI 533 Query: 517 SKEQSVLFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + +G + R + + NP+ +D S + T+LLP LL+A RNV R +D A+F Sbjct: 534 ANDTFDTWGLNKEDPRRRTVAVQNPLESDKSVLSTTLLPNLLEAIARNVARGRSDLALFG 593 Query: 572 VSHVY-----------ENDTPEG------------QKYMAAGIRKGS---SGIEGSGRLW 605 + V PE Q A + G+ G GSGR + Sbjct: 594 LQQVAFKRADASPMPSVESRPEDSVVTELVESLPLQPLHVATVATGNIEHEGPWGSGRAY 653 Query: 606 SDKSE-ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA--EI 662 S E R V A+A + + +++ P +HPGR + +A E Sbjct: 654 SYADAIESARQV----ARAAGVDI--------TVKAAEQLP--WHPGRCAALVLTADEET 699 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 V+GY GE HP +L+ L C E+ + ++P+ +K LSS + +D+A Sbjct: 700 VVGYAGELHPQVLEALELPARTCAMELDVTALPLDEKFPAPI-----LSSFPALHQDIAL 754 Query: 723 IVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 +VD+ PA + ++ + L++ V +FDVF+G+ LGEGKKS+A Q+L FR D Sbjct: 755 VVDEDTPAEAVRRVVEEGAGELLESVELFDVFRGEQLGEGKKSLAFQLL-------FRAD 807 Query: 782 DIRILMD 788 D R L D Sbjct: 808 D-RTLTD 813 >gi|153955805|ref|YP_001396570.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium kluyveri DSM 555] gi|219856172|ref|YP_002473294.1| hypothetical protein CKR_2829 [Clostridium kluyveri NBRC 12016] gi|146348663|gb|EDK35199.1| PheT [Clostridium kluyveri DSM 555] gi|219569896|dbj|BAH07880.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 792 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 238/824 (28%), Positives = 403/824 (48%), Gaps = 53/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK ++WLKD++D +++ +++ D LT G +VE+V E + K++ +E +P D Sbjct: 1 MKVPVTWLKDYVDINITGKELGDRLTLSGSKVEEVVTTGEDIKNVVTGKLIKIENHPGAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK + +Q++ A N++ + A S I + + K+RG+ S GM Sbjct: 61 NLFVCQVDVGKEEPLQIITAAKNMKEKDVIPVALHDSII-YGGVKIKKGKLRGLVSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP D P+G + + L ++ I+D+ +T NR DC+ + GI Sbjct: 120 CSEEELGIAGDKQIEGLMILPGDTPIGKDIKEVLNMTSSILDLEITSNRPDCLSILGIVR 179 Query: 177 DLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + AA L +L E S S +I ++K ++ D LC+ + ++ V+ +P+W Sbjct: 180 E-TAATLNETYRLPEFKYSSS-SDGNIQDKLKVEIKDG-LCRRYIARGIEDVKIKPSPSW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 M +RL G+R I+ +VDITN+V L+ G P H +D I S + V RA GEK + LD+ Sbjct: 237 MEERLLEAGVRPINNIVDITNFVMLEMGIPMHAYDIREITSGSIVVERAGEGEKFITLDS 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L D + I R IAGI+GG ++ ++T+ V+ E A ++ NI S + L + Sbjct: 297 EERILDKDILTIKDGNRTIGIAGIMGGLNSEIREDTSSVVFECANFNGTNIRISSQKLAL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + LI L CG N P + + + Sbjct: 357 RTEASSRFEKDLDPNLAEMAMDRACYLIEMLGCGRVMEGTIDVYNEKVYPHSLEVDCNWI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++P E+ + L RL + D ++ VP++R D+ K D+ EEI RIYG D Sbjct: 417 NKFLGTNIPKENMVEYLNRLALRTEIDEDTLKIEVPTFRGDINIKEDVAEEIARIYGYDN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF---GG 526 I S + + +N +Q V + S + +N+SFIS++ +L Sbjct: 477 IPSTIIKSASTKGGKN--EKQKLDDKVIETMISSGFSQSINYSFISRKVFDKILLTEDSS 534 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDT---P 581 + + I NP+ D S MRT+ L +++ RN R +FE+ VY DT P Sbjct: 535 LRNAVIIKNPLGEDYSIMRTTTLSSMMECLSRNYSRKNEMVRLFEIGKVYIPHEDTDKLP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 + + + G+ GSS D F+ K +++E + S + Sbjct: 595 KEKNIITIGMY-GSS--------------------DYFNLKGAVENILEILKIERFSFQR 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ES PS +HPGR+ ++ ++V G GE HP + + + + E+ LD I + Sbjct: 634 ESENPS-FHPGRTALLYIKKDLV-GILGEIHPKVCENYEVEERCYIAELNLD---ILYRY 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 K L V RDLA +VD I + +IIK +++ + FD+++GK + Sbjct: 689 ANSYNKYTPLPKFPSVTRDLAVLVDDDILVQDIEDIIKKQGGNMVEKIKFFDIYKGKQIE 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + T D ++ + D+I++ + K A LR Sbjct: 749 AGKKSIAYSISYRLSNKTLTDAEVNKVHDKILKALEYKLGAQLR 792 >gi|46907441|ref|YP_013830.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes serotype 4b str. F2365] gi|66773918|sp|Q720K7|SYFB_LISMF RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|46880709|gb|AAT04007.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes serotype 4b str. F2365] Length = 802 Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTIDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S+GE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SIGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|15807348|ref|NP_296078.1| phenylalanyl-tRNA synthetase subunit beta [Deinococcus radiodurans R1] gi|12644589|sp|Q9RRX5|SYFB_DEIRA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|6460170|gb|AAF11903.1|AE002066_7 phenylalanyl-tRNA synthetase, beta subunit [Deinococcus radiodurans R1] Length = 820 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 245/852 (28%), Positives = 400/852 (46%), Gaps = 86/852 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLK+ + + + T +GL +E V++ A + +V V + E Sbjct: 1 MKLPYSWLKELIPDLPPVADLEPTFAHLGLPLEGVEDVPAPVGGVLLVAVKAAEPMEGTQ 60 Query: 60 CAILRIDTGKHQEIQVVCGAPN---VRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L +DTG++ E + GAPN + G + PG+ + + VR ++G+ES G Sbjct: 61 LTKLTLDTGENGEKTIASGAPNAVGLPAGTMVALVTPGTTL--GGITYGVRPMQGVESWG 118 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M S KEL + + +A I+ P G L +D ++DV +TPNR+D + G+A Sbjct: 119 MAASAKELGIGESNAGILTFPAGTAAPGTPLRELWPADSVLDVEVTPNRADVLSALGLAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-------------CKGFAMCCVK 223 DL A +LKE I + + P EI+ L D C FA V Sbjct: 179 DLAAYLNLELKEPQIPA---APTQPGEIRVSLPDRGRVLDRDPQGKLRFGCDHFAARAVS 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 G++N AP WM++R+ G+RSI +VD +NYV L+ G P+ ++D ++ D L V Sbjct: 236 GLQNGPAPLWMQRRVSLAGMRSIDLIVDTSNYVMLELGQPTALYDRRDVAGDGLVVAFGL 295 Query: 283 -SGEKILALDNQEYDLSPDNVVI-----------------ASDGR------IQSIAGIIG 318 GE + L + + P++++I AS G+ + IAGI+G Sbjct: 296 REGETVKDLLGNTHQVGPEDLLILDAGMSDEPVMTVAEAFASAGQPKEGSHVLGIAGIMG 355 Query: 319 GKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS 378 G H +T DV++E A +DP+ + R+ LG+ TD+ YR+ERGVD + P V+ Sbjct: 356 GDHGHVRADTRDVVIESAHFDPVLLRRTSTRLGLKTDAVYRYERGVDPL-LAPKAAVRVA 414 Query: 379 LILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 +L GGT P+ I +++ L G+ + + L RLG +V G+ Sbjct: 415 ELLRAAGGTPEAGQTVVGTPEVPQTITTTGEQIRALLGMHIGTAEMRESLTRLGCTVTGD 474 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY- 497 D V+ PSWR D+ DL EE+ R++G ++ E LP +V + + QS R Sbjct: 475 GDSLTVTPPSWRVDMVIWQDLAEEVARLHGFTELP-ETLPTLRVHESNIGASAQSEARAE 533 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 ++R LA EVV ++F S E++ + + NP++ D + MRT+L P LL+A G Sbjct: 534 LRRTLAGLGFQEVVTYTFTSDEEAQKARAEAPGVRLRNPMTTDRTGMRTALYPSLLRAAG 593 Query: 558 RNV--DRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR- 614 + +RA+ +FE+ ++ AAG ++ G+ G L + ++ R Sbjct: 594 AHPKGERAL----LFEIGRIFP----------AAGEQE-RLGLLMRGDLAARTYQDGVRG 638 Query: 615 ----FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 F L A A+ +L+ LR + P+ HPG +G + + E V G+ G Sbjct: 639 DFSVFKGLVQGFAGAVGA---SFALEQLRGDD-VPAALHPGVAGAVVWNGERV-GWLGAL 693 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP I FGL E ++P+ + S RDLA I Q + Sbjct: 694 HPEIAQEFGLKGDTFLMEA---ALPLPGRDWAFRDP----SRAPAAWRDLAVIAPQGVSY 746 Query: 731 GTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 G +V ++K L++ V FDVF G+ +G G +SVA+++ + K T D+++ + + Sbjct: 747 GDIVGVLKGAGGELLESVEPFDVFTGEQVGAGNRSVAVRLTYRGAK-TLTDEEVDPVFNA 805 Query: 790 IVENVVKKTNAV 801 ++ V + A+ Sbjct: 806 QIDAVKARGWAI 817 >gi|254823524|ref|ZP_05228525.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] gi|293592744|gb|EFG00505.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194] Length = 802 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEVEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|226223822|ref|YP_002757929.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes Clip81459] gi|225876284|emb|CAS04993.1| phenylalanyl-tRNA synthetase beta subunit [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 802 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEVEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|213962068|ref|ZP_03390333.1| phenylalanyl-tRNA synthetase, beta subunit [Capnocytophaga sputigena Capno] gi|213955421|gb|EEB66738.1| phenylalanyl-tRNA synthetase, beta subunit [Capnocytophaga sputigena Capno] Length = 809 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 242/839 (28%), Positives = 412/839 (49%), Gaps = 66/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 MK + +WLK +L D+ E LT +GLEVE +++ E AL + VL E++P Sbjct: 1 MKISYNWLKQYLKLDLPAEDTAVILTDLGLEVEGIEHFESVKGALKGVVVGHVLECEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D I ++D G +Q+VCGAPNV G + A G+ + + + + KIRG Sbjct: 61 NADKLKITKVDVGGDAPLQIVCGAPNVAQGQKVLVATIGTVLYDKDDKPFEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L VG S E+ +D + ++ LTPNR+D + Sbjct: 121 ESFGMICAEDELGLGESHDGIMVLDNKYEVGTPASKVFEVETDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + K + + P ++ ++I ++ + L + + VR Sbjct: 181 YGVARDLRAGLIQKGTSLELITPSVTKFHVDNRSVKIDIEVQNKKLVPRYTGVTISNVRV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ +LKA+G+ + +VD TNYV G P H FDA I + V+ A G K Sbjct: 241 GESPVWLQNKLKAIGITPKNNVVDATNYVLHGMGQPLHAFDADHIIGRKIVVKNAEEGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E LS ++++I + IAG++GG+++G T ++ +E A ++P++I ++ Sbjct: 301 FKTLDGVERTLSAEDIMIWDAEKPLCIAGVLGGENSGVTPFTRNIFLESAYFNPVSIRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK-- 403 K I +D+ YRFERG++++ L + LI ++ GG +SD+ I + P+K Sbjct: 361 AKRHAINSDASYRFERGINIEDCKYALIYAAVLIENIAGGVISSDV-----IDFYPKKQE 415 Query: 404 --IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+ E V +L G +P + IL L V ++ + +PS+R DV+ +AD+ Sbjct: 416 DFQVFLAFENVDKLIGQKIPRDTIKSILHSLDIKVNSLTERGLGLLIPSYRVDVQREADV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS-------RTRYVKRVLASRAMMEVVN 512 +EEILRIYG + I + +K N ++ S V L ++ +E++ Sbjct: 476 IEEILRIYGYNNI--------AITEKVNATMSHSDKYADHNMQNVVAEQLVAQGFLEIMT 527 Query: 513 WSFIS-KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S +S KE + ++ +++LNP+S+D+ MR +L+ L+ N +R +D +FE Sbjct: 528 NSLVSEKEITTYTEKPEQAVKLLNPLSSDLGYMRKNLVFSGLEVIAYNNNRKRSDLKLFE 587 Query: 572 V--SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 ++ Y N K++ + G++ E W +++ V F K S+ Sbjct: 588 FGKNYHYINGNYSENKHLVLYL-TGNTQPEH----WGSPAQK----VSFFQLKGVVESLF 638 Query: 630 E--PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 E + +L E+ + R I E +LG G +L FG+ + Sbjct: 639 ERLGLKEIVTLPLETNEVVYSEGFRWQI----GETLLGTIGVVKTKVLKEFGIKQEVLVA 694 Query: 688 EVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 ++ + I ++Q + KVV+ + V+RDLA ++D + L + ++ L+ Sbjct: 695 DLNWEEI-VAQ---VQGHKVVYKEIPKYPEVRRDLALLLDDKVTFADLYKVAYTTEKDLL 750 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV+QG L EGKKS A+ ++Q T D I M R+ + K+ A +R Sbjct: 751 QRVNLFDVYQGDKLPEGKKSYALSFVLQDDNKTLTDKQIDKTMQRLQDAFEKQFGAAIR 809 >gi|116495152|ref|YP_806886.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus casei ATCC 334] gi|116105302|gb|ABJ70444.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus casei ATCC 334] Length = 803 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 226/823 (27%), Positives = 409/823 (49%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D VS E++ D ++ G+EV+ V + +A L + KV+S +P+ D Sbjct: 1 MDVSYEWLKELVDVPVSPEELADKVSRTGIEVDGVKHPDAGLKKIVVGKVVSATPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLHLCQVDVGEETPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ S++ + P++ G L + D I+D +TPNR+D +G Sbjct: 120 CALQEIGFSENVVPKPYLNGIYVFNEPLEP--GSDALAALGMHDAILDFEITPNRADALG 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 +RG+A + V A + PL+ P+ + ++ D+ + + + V+ Sbjct: 178 MRGVAWE-VGATYAEKPHFE-EKPLTEGDRPVGDFLSAEVKDAKDAPSYQLRVIDHVKVQ 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TN + L G P H FD +++ S + VRRA +GE + Sbjct: 236 ESPLWLQKRLWLAGIRPINNIVDVTNLIMLAYGQPLHAFDYAKLGSQQIVVRRAKNGEPL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E++L ++VI + ++AG++GG ++ TT V++E A ++P+N+ ++ Sbjct: 296 TTLDGNEHELDDQDIVITNGQVPVALAGVMGGLNSEITPETTTVVIESASFNPVNVRKTA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +++ RFE+G +L + L V+ + L G + ++ +V + Sbjct: 356 LKYNLRSEASSRFEKGTNLADINRALDAAVAWMAELSEGQVAKGTVSPTSVSAEDVVVDI 415 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G D+ + +I E+LGF V F V+VP R D+ KADLVEE+ RI Sbjct: 416 SLDHINHVLGTDLTQQQVTQIFEQLGFDVTESDGLFAVAVPPRRWDIHIKADLVEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVL 523 YG D + S LP T + S QQ R R + +L + +V+ ++ + EQ L Sbjct: 476 YGFDNLPST-LPTTTMTIGEYTS-QQKRIRRTRHLLEGLGLTQVITYALTTAEAVEQFKL 533 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G +++ +P++ D + +R +++ GLL N R D AI+E ++ T G Sbjct: 534 QPGLPTKVD--SPMTTDHAVLRMNMISGLLNVIKYNQARKETDVAIYEQGRIF---TKTG 588 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-S 642 + I I +G + + + + VD F AK ++ + D +RFE + Sbjct: 589 DQVRPTEIEYLGGAI--TGNVVAKDWHQSAKAVDFFYAKGIVTHLLGDYSLADPIRFEAT 646 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 A + HPG++ I ++V G G HP L FE+ LD++ + ++ Sbjct: 647 QAVAELHPGQAANIFVGDQLV-GILGRLHPAFEHAEHLPATFV-FELDLDALFAAPRQ-- 702 Query: 703 KTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGE 760 +K+ + P V RD+A VD+ + ++ I ++ + DVT+FDV+ G + Sbjct: 703 --EKIAQPAPKFPAVTRDIALQVDEQVTNDQVMAIFHEHGGAFLQDVTLFDVYAGDHIAA 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+KS+A + + T +D++ D++ + A +R Sbjct: 761 GQKSLAYTLTYRRDDQTLTEDEVTQAFDKVKAALQTGIGAAIR 803 >gi|251779581|ref|ZP_04822501.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083896|gb|EES49786.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 791 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 239/833 (28%), Positives = 409/833 (49%), Gaps = 73/833 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK SWL+D++D +VS +++ D LT G ++E+ + + + K+ +E++PD D Sbjct: 1 MKVPFSWLQDYVDINVSPKELGDKLTLTGSQLEELIIQGDVIDKVVTGKITEIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + IQ+V A N++ + A GS + + + I K+RG+ S GM Sbjct: 61 KLSICQVDIGT-ETIQIVTAATNMKEQDVVPVALHGSTLADGSKIKK-GKLRGVPSNGMF 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP D +G L + L+L+ I+D +T NR DC+ + G+A Sbjct: 119 CSEEELGIAGDEPVHGLMILPTDTKLGVELKELLKLNKAILDFEITSNRPDCLSIVGMAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + AA K N+ +S ++ E+ ++ D LC + VK V+ +P WM+ Sbjct: 179 ETAAALRTTYKMPNLEYKVSGNGNVESELNVEVKDD-LCLRYMARKVKNVKVKPSPGWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 +RL G+R I +VDITN+V L+ G P H +DA IS + + V RA SGEK LD E Sbjct: 238 ERLLEAGIRPIDNIVDITNFVMLELGQPMHAYDAREISTNKIVVERAESGEKFTTLDEVE 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L + I D +I +AGI+GG ++ ++TT+V+ E A +D NI + K L + + Sbjct: 298 RELDDSMLCIKDDNKIVGLAGIMGGLNSEIKEDTTEVIFESANFDGTNIRVNSKKLNLRS 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKR 413 ++ RFE+ +D + +LI L G + I N + K+V ++ V + Sbjct: 358 EASGRFEKDIDPNLAKLAIDRACALICELGAGEVVEGTIDIYNKKKEEGKVVVDSNWVNK 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+ E+ + L+ + + D V+ P++R D+ K D+ EEI RI+G D I Sbjct: 418 FLGTDLSKEEMKKCLDSVDLFTEIDGDNLNVTAPTFRIDIAIKEDIAEEIARIHGYDVI- 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--------EVVNWSFIS-------- 517 P + V R +Y KR+L + +M + +++SF+S Sbjct: 477 --PATIFSVATSR-------EPKYRKRLLDDKVVMLATGSGLNQSISYSFVSPKVFDKIN 527 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S L + + I NP+ D S MRT+ +P +++ GRN R +FE++ +Y Sbjct: 528 VPEDSEL----RNVVRIKNPLGEDYSVMRTTTIPSMMECLGRNYSRNNDYVRLFEMAKIY 583 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 E P + + G ++ D C ++DL K +++E Sbjct: 584 IKNEDETKIPTERNILTIG-------------MYGD-----CDYLDL---KGAVENIVEG 622 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +S YHPG++ + +V G GE H ++ + +G+ P E+ L Sbjct: 623 LGIKNSKYERESENVSYHPGKTAKLVIGKNVV-GTLGEVHLDVTENYGIDVPCFIAELNL 681 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 D++ S K K L V RD+A +V+ I + I+ L++ + +F Sbjct: 682 DALYESADMDRKYKA---LPKFPAVTRDIALLVEDSILVQEIEECIRKAGGNLVEKIELF 738 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++GK + +GKKS+A + + K T D ++ + D+I+ ++ K A LR Sbjct: 739 DIYKGKQIPDGKKSIAYAICYRADK-TLTDKEVNKVHDKILRSLEYKLGATLR 790 >gi|311114470|ref|YP_003985691.1| phenylalanyl-tRNA synthetase subunit beta [Gardnerella vaginalis ATCC 14019] gi|310945964|gb|ADP38668.1| phenylalanyl-tRNA synthetase beta subunit [Gardnerella vaginalis ATCC 14019] Length = 821 Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 235/801 (29%), Positives = 384/801 (47%), Gaps = 90/801 (11%) Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM 134 ++CGAPN+ G V PG+ +P + + RK G S GM SE+EL L D I+ Sbjct: 38 IICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKTYGHISNGMCASERELGLGDSHDGII 96 Query: 135 EL--------PIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV----AA 181 L DA G L L+ P++++++TP+R RG+A + A Sbjct: 97 LLREYGFSKAEYDALKPGDDAMSLLHLNKPLLEINITPDRGYAFSYRGVAREYHHSTGAT 156 Query: 182 GLGKLKEINISCPL---SSESIPLEIKFDLDDSSLCKGFAMC---CVKGVRN----NVAP 231 + E+N S+ +I+ ++D++ G C + VRN + +P Sbjct: 157 YTDPVIELNNKADQVVSMSDGASKDIEVSIEDNNPIHGVVGCDRYYARVVRNFNPDSSSP 216 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 NWMR+RL G+R IS VD+TNYV LD G P H +D +I + VRRA +GE++ LD Sbjct: 217 NWMRRRLTRAGMRGISLAVDVTNYVMLDLGQPLHAYDLDKIEGPIVVRRAKAGERLTTLD 276 Query: 292 NQEYDLSPDNVVIASD------GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ +L+ ++++I R+ +AG++GG + T ++LVE A +DP++IAR Sbjct: 277 GKDRELNVEDLLICDSPKGNHGSRVLGLAGVMGGMYGEVTSETKNILVEAAHFDPVSIAR 336 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + + T++ RFERGVD + V+++ G S+ N T IV Sbjct: 337 TARRHKLPTEASRRFERGVDTALQPAAAQMAVTMLSDFGSGEPSNTPTDVNNTVDRSVIV 396 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEIL 464 F SEV+R+SG+ + + IL +G SV G + F V P+WR D+ E DLVEEI Sbjct: 397 FKASEVERVSGLSIDLNRISDILTDIGCSVAGGGNGSFSVLPPTWRPDLNEPCDLVEEIA 456 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+ G D+I + +P V K L+ Q+ R + LA ++E +++ F+ +E F Sbjct: 457 RLVGYDEIPVK-VPAVPVTGKTGLTQDQATRRAIAYELAEMGLIESLSYPFVGQEDFKAF 515 Query: 525 -----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + ++I NP++ D +R ++L L RN+ R ++D +++E+ HVY D Sbjct: 516 REDVDSVAKVSVKIANPLAGDRPWLRRNVLTTLAGTVRRNIRRGLSDVSLYELGHVYFAD 575 Query: 580 T--------------------------PEGQKYMAAGIRKGS--SGIEGSGRL--WSDKS 609 PE ++AA + + +G G+ R WSD Sbjct: 576 PNAPAIPALPGSVRPTDAQLAALDAGLPEQPLHVAALLTGNAEETGWLGTHREVDWSDAV 635 Query: 610 EERCRFVDLFDAKADALSVIEPFVSLDSLRFES-GAPSWYHPGRSG----IIKTSAEIVL 664 E R V+ D + S P+ +HPGR+ + + ++ + Sbjct: 636 EAVNRLGKRIG------------VAFDVRQINSDDVPASWHPGRTAKVYIPVDGADDVEI 683 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 G GE HP + + GL FE+ L ++ Q K + K V S+ PVK+D AF+ Sbjct: 684 GIVGELHPQVDENLGLPKHSAAFELDLSALFDAMQVKPVQAKPV---STFPPVKQDFAFV 740 Query: 724 VDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + A L I+K L++ V +FDV++G+ LGEG +S+A V + T DD Sbjct: 741 APSSLTAHDLKEAIVKASGDLLESVELFDVYEGEQLGEGLRSLAYSVTFRAADRTLSSDD 800 Query: 783 IRILMDRIVENVVKKTNAVLR 803 + + + I ++ +K +A LR Sbjct: 801 MEAVREAITKS-AQKLHATLR 820 >gi|282898724|ref|ZP_06306711.1| phenylalanyl-tRNA synthetase, beta subunit [Cylindrospermopsis raciborskii CS-505] gi|281196251|gb|EFA71161.1| phenylalanyl-tRNA synthetase, beta subunit [Cylindrospermopsis raciborskii CS-505] Length = 812 Score = 300 bits (769), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 233/837 (27%), Positives = 420/837 (50%), Gaps = 58/837 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ + +WL++ ++ ++ E++ TLT G EVE +++R + ++ KVL E++P+ D Sbjct: 1 MRISFNWLRELVEIKLTPEELAHTLTMAGFEVESIEDRRTWADGVVIGKVLKREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + + +VCGA NV + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCTVDIGDEETLNIVCGASNVCADIYVPVATKGTYLPNIDLKIKPTKLRGVPSNGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L + I + GR + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPTEIDGIHIFRQEGLTLGRAVGPLLGLDDVILDVTATANRADALSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A GKL ++ + S +I+ + + C + ++ V+ +P W+++R Sbjct: 181 VAALTGGKLSLPQLTGVEITPSTAQKIRVKISEQHACPLYIGTLIENVKIAASPEWLQRR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILAL 290 L A G+R I+ +VDITNYV L+RG P H FD R+ V + VR A +GE + L Sbjct: 241 LIAAGVRPINNIVDITNYVLLERGQPLHAFDKQRLEQVSEGTDVTIGVRFAQAGETLKTL 300 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D Q +LS N++I ++ + ++AG++GG+ TT + +E AL++ + I RS +++ Sbjct: 301 DGQTRNLSTQNLLITANNQPVALAGVMGGEETEIHPGTTSLFLEAALFNSVAIRRSSRSV 360 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP------RKI 404 G+ +++ R+ERGV+ + +SL+ L IA Y+P I Sbjct: 361 GLRSEASGRYERGVNWAELATASDRALSLMQELADAKVVHQEIA---DYRPDNALGNHPI 417 Query: 405 VFMNSEVKRLSG-IDVPIE-------DSLRILERLGFSVIGEYD-KFEVSVPSWR-QDVE 454 + + ++ G ID+ +E D +IL LG + D ++V VPS+R D+E Sbjct: 418 ILRLERINQVLGPIDLGVETGELKAADVEKILTALGCELTDNQDGSWQVKVPSYRYSDLE 477 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL+EEI R+Y D + LP + + L L Q R ++ L + + E++++S Sbjct: 478 REIDLIEEIARLYSYDNF-VDTLP--EKTEPGYLPLDQELVRKLRSYLRAEGLTELMHYS 534 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + G R++ + NP+ A+ S +RT L+ GL+ A N+ + FE+ Sbjct: 535 LVKP-------GEDRQILLNNPLFAEYSALRTDLISGLIDAFEYNLQQGNGALNGFEIGT 587 Query: 575 VYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 ++ + EG + + AGI G + + GR ++ E + F AK ++E Sbjct: 588 IFSREE-EGLEESQVIAGIMGGDTTV---GRWFNGGRENPMTW---FAAKG----ILENV 636 Query: 633 VSLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 L+ E HPGR+ + LG FG+ HP + L + + F++ Sbjct: 637 FQQLGLQVEFQPENRDRRLHPGRTASLWLGG-ARLGTFGQVHPQLRREKSLPDAVYVFQL 695 Query: 690 YLDSIPISQKK-RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDV 747 LD++ + T K S+ RDLAF + G + +I + L++ V Sbjct: 696 DLDTLLSTLDNDELLTPKFKPYSTYPASDRDLAFFASVKVTVGEIEKVITKAGKGLLESV 755 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VFD ++G+++ G++S+A +++ + + T D+++ + +I E++V+K LRS Sbjct: 756 EVFDEYRGENVPIGQRSLAFRLVYRAVDHTLTDNEVEPVHRKIRESLVEKFGVTLRS 812 >gi|255521419|ref|ZP_05388656.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL J1-175] Length = 802 Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 417/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEVEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAIALLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|191638661|ref|YP_001987827.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus casei BL23] gi|190712963|emb|CAQ66969.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Lactobacillus casei BL23] gi|327382702|gb|AEA54178.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus casei LC2W] gi|327385889|gb|AEA57363.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus casei BD-II] Length = 803 Score = 300 bits (769), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 223/821 (27%), Positives = 407/821 (49%), Gaps = 36/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D VS E++ D ++ G+EV+ V + +A L + KV+S +P+ D Sbjct: 1 MDVSYEWLKELVDVPVSPEELADKVSRTGIEVDGVKHPDAGLKKIVVGKVVSATPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLHLCQVDVGEETPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ S++ + P++ G L + D ++D +TPNR+D +G Sbjct: 120 CALQEIGFSENVVPKPYLNGIYVFNEPLEP--GSDALAALGMHDAVLDFEITPNRADALG 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNN 228 +RG+A + V A + PL+ P+ + ++ D+ + + + V+ Sbjct: 178 MRGVAWE-VGATYAEKPHFE-EKPLTEGDRPVGDFLSAEVKDAKDAPSYQLRVIDHVKVQ 235 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W+++RL G+R I+ +VD+TN + L G P H FD +++ S + VRRA +GE + Sbjct: 236 ESPLWLQKRLWLAGIRPINNIVDVTNLIMLAYGQPLHAFDYAKLGSQQIVVRRAKNGEPL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E++L ++VI + ++AG++GG ++ TT V++E A ++P+N+ ++ Sbjct: 296 TTLDGNEHELDDQDIVITNGQVPVALAGVMGGLNSEITPETTTVVIESASFNPVNVRKTA 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + +++ RFE+G +L + L V+ + L G + ++ +V + Sbjct: 356 LKYNLRSEASSRFEKGTNLADINRALDAAVAWMAELSEGQVAKGTVSPTSVSAEDVVVDI 415 Query: 408 N-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G D+ + +I E+LGF V F V+VP R D+ KADLVEE+ RI Sbjct: 416 SLDHIDHVLGTDLTQQQVTQIFEQLGFDVTESDGLFAVAVPPRRWDIHIKADLVEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 YG D + S LP T + S QQ R R + +L + +V+ ++ + E + F Sbjct: 476 YGFDNLPST-LPTTTMTIGEYTS-QQKRIRRTRHLLEGLGLTQVITYALTTAEAAEQFKL 533 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 ++ +P++ D + +R +++ GLL N R D AI+E ++ T G + Sbjct: 534 QPGLPTKVDSPMTTDHAVLRMNMISGLLNVIKYNQARKETDVAIYEQGRIF---TKTGDQ 590 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGA 644 I I +G + + + + VD F AK ++ + D +RFE + A Sbjct: 591 VRPTEIEYLGGAI--TGNVVAKDWHQSAKAVDFFYAKGIVTHLLGDYSLADPIRFEATQA 648 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 + HPG++ I ++V G G HP L FE+ LD++ + ++ Sbjct: 649 VAELHPGQAANIFVGDQLV-GILGRLHPAFEHAEHLPATFV-FELDLDALFAAPRQ---- 702 Query: 705 KKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 +K+ + P V RD+A VD+ + ++ I ++ + DVT+FDV+ G + G+ Sbjct: 703 EKIAQPAPKFPAVTRDIALQVDEQVTNDQVMAIFHEHGGAFLQDVTLFDVYAGDHIAAGQ 762 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T +D++ D++ + A +R Sbjct: 763 KSLAYTLTYRRDDQTLTEDEVTQAFDKVKAALQTGIGAAIR 803 >gi|159903434|ref|YP_001550778.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9211] gi|159888610|gb|ABX08824.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9211] Length = 834 Score = 300 bits (769), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 244/863 (28%), Positives = 445/863 (51%), Gaps = 104/863 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK +LSWLK+ +DT + + +I + L+ G EVE+ +D + + KV V +P+ D Sbjct: 1 MKASLSWLKELVDTSMDVAEIAEKLSISGFEVEEEIDLGLKVKGIVVGKVEEVLPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I R+D G + +Q+VCGA NVR G+ + A G+ + N+ + ++RG+ S GM+ Sbjct: 61 KLKICRVDIGTKKSLQIVCGARNVRDGVHVLVATEGAYLQPINLKIKKSELRGVLSEGMI 120 Query: 119 CSEKELMLSDDSA-------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS E+ L D+ S++++P +G L + D I+D+++T NR D + + Sbjct: 121 CSLGEIGLESDTDGIEILEDSLLKIP---EIGSSPRGILGMDDTILDLAITANRPDGMSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEI--KFDLDDSSLCKG--FAMCCVKGVR- 226 G+A +L A KL + P + +I DL + ++ +++ ++GV Sbjct: 178 VGLARELSAITDSKL-----NLPKIKSLVEFKIFEPKDLSEEAISSKEIYSLSYLEGVDG 232 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT--------- 277 +P W++ RL+ G+RSI+A+VDITNY+ L++G P H FDA ++ ++LT Sbjct: 233 KKKSPLWLKNRLEKAGIRSINAIVDITNYIMLEQGQPLHAFDADKL-NILTDKEVTQNDF 291 Query: 278 -VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VRRA + E +LALDN EY+L+ ++ VI + ++AGIIGGK + +++T ++ +E A Sbjct: 292 GVRRAKAKETLLALDNNEYELNHESHVITCCDKAIAVAGIIGGKSSSVNEHTKNIWLEGA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 ++ +I RS + +GI TDS R+E+G+ Q + + V L SD I++N Sbjct: 352 VFTSTSIRRSSRKIGIRTDSSSRYEKGISAQITLKAVNRAVELYNDCFKCRVSDGFISKN 411 Query: 397 ITYKPRKIVFMNSEV-----------------KRLSGIDVP-------------IEDSLR 426 +T +I + KR S D P IE+SL+ Sbjct: 412 LTPNNYEIKLRRDRIHNILGALKVTSSNKSGNKRTSIQDPPDNNYTKRNLTDNEIENSLK 471 Query: 427 ILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVED 484 ++G + + ++VSV + R D++ + DL+EEI R+ G D+ + P P+ Sbjct: 472 ---KVGCEIKCIEEGWKVSVLANRSNDLQREIDLIEEIARLIGYDKFDANLPDPIKP--- 525 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNM 544 L +QS R ++ L + + E+V++S + K+++ ++ + I NP+ + S++ Sbjct: 526 -GYLRPKQSLERTIRNCLINNGLQEIVSFSLVPKDET-----NEQMVAISNPLLTETSHL 579 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGR 603 RT+L LK RN+D +FE+ +VY + E QK + +G G +E Sbjct: 580 RTNLWEEHLKVCKRNIDSGKQACWVFEIGNVYTVEKKEIYQKSILSGAITGYRSME---- 635 Query: 604 LWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFESGAPSWYHPGRSGIIKTSA 660 LW+++ ++R +D + A+ + + V LR + HPGR SA Sbjct: 636 LWTNEGKQRD--MDYYTARGKITQLTDRLKINVEDRPLRNDER----LHPGR------SA 683 Query: 661 EIVL-----GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK-TKKVVHLSSLH 714 E++L G FG+ +P + + ++ FEV +D++ + +R K + +++ Sbjct: 684 ELILEGKRFGVFGQINPELANKLNINRSTFLFEVSMDAMLEAAARRNKWLRSFKEFATVP 743 Query: 715 PVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 ++RD+A IV + AG ++ I+K L++ V + D ++G ++ G+ S+A ++ + Sbjct: 744 HMQRDMAVIVSKEYLAGDIIKKIMKTGTPLLESVELIDRYEGGNIDSGEVSLAFRLTYRK 803 Query: 774 LKDTFRDDDIRILMDRIVENVVK 796 K+T ++ +I + DRI++ +V+ Sbjct: 804 KKETLKETEINPVHDRILKELVQ 826 >gi|290769981|gb|ADD61748.1| putative protein [uncultured organism] Length = 808 Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 240/850 (28%), Positives = 399/850 (46%), Gaps = 107/850 (12%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +L+W+K + + + ++ D +T G +VE + + L + ++LSVER+PD Sbjct: 1 MNTSLNWIKAMVPGLECTDQEFRDAMTLSGTKVECFNAFDKNLDKIVVGQILSVERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP------------PGSCIPENNMIVN 105 D I +++ G + +Q+V GAPN+ VG G P G +PE+ + + Sbjct: 61 DKLVICQVNVG-SENVQIVTGAPNIEVGSSGQKVPVVLDGGKVAGGHDGGALPEDGIKIK 119 Query: 106 VRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG+ES GMMCS +EL S + I DA VG +YL L+D + + Sbjct: 120 KGKLRGVESCGMMCSIEELGSSREFFPDAPEEGIYIFGDDAVVGSSAVEYLGLNDTVFEY 179 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 +T NR DC V GIA + A ++ + E + + D++ LC + Sbjct: 180 EITNNRVDCYSVIGIAREAAATFRKPFNPPVVTKTGNDEDVNTMVSVDIEAKELCSRYVA 239 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 VK +R +P WM+QRL G+R I+ +VDITNYV + G P H +D I+ + V Sbjct: 240 RVVKNIRLAPSPKWMQQRLMTAGIRPINNIVDITNYVMEEYGQPMHAYDYDTIAGHKIVV 299 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A GEK + LD QE L ++I + IAGI+GG+++ D+ +L E A + Sbjct: 300 RTATDGEKFVTLDGQERTLDAQTLLICDGEKPVGIAGIMGGENSMITDDVQTMLFEAATF 359 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS--------D 390 D NI ++ K +G+ TD+ +FE+G+D + + + LI L G D Sbjct: 360 DGTNIRKTTKKIGLRTDASGKFEKGLDPENAMEAINRACQLIEELDAGDVVGGVVDVYPD 419 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPS 448 + + ++P K L G +V ED L ERL EYDK E+ +P+ Sbjct: 420 PVTKKRLPFEPAK-------YNALLGTNVSDEDMLSYFERLEV----EYDKDANELIIPT 468 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAM 507 +RQD+ AD+ EE+ R +G D I P L + E +S +QS V Sbjct: 469 FRQDLNRDADMAEEVARFFGYDNI---PTTLPKGETTMGKISFEQSIEDAASEVAQFTGF 525 Query: 508 MEVVNWSFISKE---------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 + + +SF S + SV ++ + I NP+ D S MRT + G+L + Sbjct: 526 SQAMTYSFESPKVFDKLKLPADSVY----RKTVVISNPLGEDFSVMRTLPIHGMLTSLST 581 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF--- 615 N +R + ++E++ + Y+AA ++ +ER F Sbjct: 582 NYNRRNKNVKLYELAKI----------YLAADD-------------VNELPDERVEFTLG 618 Query: 616 ----VDLFDAKADALSVIEPFVSLDSLR------FESGAPSWYHPGRSGIIKTSAEIVLG 665 VD + K VIE F+ ++ ++G P + HPGR + A+ +G Sbjct: 619 AFGSVDFYSMKG----VIEEFLEKIGMKKKPTYDAKAGIP-FLHPGRQADV-YYADKKIG 672 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 Y GE HP++ D + + + V +D IP + + KK ++ V RD++ ++ Sbjct: 673 YIGELHPDVADTYSIGERT--YIVVID-IPTVTEMASFDKKFTGIAKFPAVTRDISMVMP 729 Query: 726 QHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + +P G + II K ++++ +FD+++G + EG KSVA + + T D DI Sbjct: 730 KELPVGEVEKIIEKRGGKILESYNLFDIYEGSQIKEGFKSVAYSIAFRAKDRTLEDKDIT 789 Query: 785 ILMDRIVENV 794 +M++I +++ Sbjct: 790 PVMEKIFKDL 799 >gi|30316216|sp|Q8DL37|SYFB_THEEB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 821 Score = 300 bits (768), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 241/848 (28%), Positives = 410/848 (48%), Gaps = 71/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ + D+ + + D LT G EVE +++R + +V +L+ E +P+ Sbjct: 1 MRVSLRWLRELVAVDLDVTMLADRLTMAGFEVEDIEDRRTWAEGVVVGYILACEPHPNAQ 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +VCGAPN GL A PG+ + + ++ + K+RG++S GM+ Sbjct: 61 KLRVCQVDVGQGEPRTIVCGAPNAAAGLYVPVALPGAYLAKIDLKIRPAKLRGVKSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L+ +S I VG + L L D I+ ++ T NR+D + + GIA ++ Sbjct: 121 CSLAELGLTKESEGIHTFTDAVTVGEDVRPLLGLDDVILHLTSTANRADALSMVGIAREV 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A L ++ P P + ++ + D C + + V+ +P Sbjct: 181 AA-----LTGAPLTLPTPRAIAPKKSGAKGPVQLAIADPQACPAYCGTLITHVQIAPSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGE 285 W++QRL+A GLR+I+ +VDITNY+ L G P H FD R+ V + VR A +GE Sbjct: 236 WLQQRLEAAGLRAINNVVDITNYILLKWGQPLHAFDWDRLQKVAAQTPVSVGVRFAKAGE 295 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD QE LS +N++I + ++AG++GG+ T +V +E AL+ I R Sbjct: 296 TLKTLDGQERRLSSENLLITAGDVPVALAGVMGGEETEVHPGTQNVFLEAALFASPVIRR 355 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ T++ R+ERGV+ + ++L+ + GT SD +A R + Sbjct: 356 SARAQGLRTEASARYERGVNPAELEAATAEAIALLKEIAQGTVSDTTLADQRPPLERTLT 415 Query: 406 FMNSEVKRLSGIDVP-IEDS-----------LRILERLGF------SVIGEYDKFEVSVP 447 +V RL G V EDS +L RLGF ++ E + V+VP Sbjct: 416 LRLEQVHRLLGAVVSEAEDSDEPAYLDPETVEELLSRLGFHLSRQETLEDELVVWSVTVP 475 Query: 448 SWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 +R +D+E + DL+EEI R+YG D+ + E LP Q E L L+ + R V+ Sbjct: 476 PYRFRDIEREVDLIEEIARLYGYDRFE-ETLP-AQTEVG-ALPLELTLLREVRAAFRGAG 532 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + E++++S++ GG ++ ++NP+ A+ S++RT L+ GL++A N ++ Sbjct: 533 LTELMHYSWVK-------GGQPNQVTVVNPLVAEFSSLRTDLITGLVQAFRYNHEQGNPP 585 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF---VDLFDAKA 623 FE+ V+ D ++ + R G GI G G W K R + + ++AK Sbjct: 586 LNGFEIGRVFGQD----EEGLWENDRLG--GIIG-GDPWQGKWVRRSQQPQPLTWYEAKG 638 Query: 624 DALSVIEPF---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 SV + F V S R + HPGR+ ++ E LG FG+ HP + Sbjct: 639 ILESVFQRFGLNVEYQSDRHDER----LHPGRTAVLCLQGE-RLGIFGQLHPQYAATLEI 693 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 I FE+ L+ + ++R + S+ RDLAF + L I Sbjct: 694 PAAIYVFELDLEVLLSRLEERYRQIVFQPFSTYPASDRDLAFFAPTALTVAELSRTIWKA 753 Query: 741 ----DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 D ++ V +FD + G + G++S+A ++ + T + ++ L RI +++V+ Sbjct: 754 AGGRDSFLESVELFDEYSGSGVPAGQRSLAFRLTYRASDRTLTEAEVNELHQRIRDSLVE 813 Query: 797 KTNAVLRS 804 K LRS Sbjct: 814 KYAVTLRS 821 >gi|164687653|ref|ZP_02211681.1| hypothetical protein CLOBAR_01295 [Clostridium bartlettii DSM 16795] gi|164603427|gb|EDQ96892.1| hypothetical protein CLOBAR_01295 [Clostridium bartlettii DSM 16795] Length = 797 Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 235/835 (28%), Positives = 403/835 (48%), Gaps = 68/835 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLKD++D D+ + D +T G + E V+ E + + K+L ++ +P+ + Sbjct: 1 MLVPVKWLKDYVDIDIDTVEFADMMTMTGTKTETVEFFGEGIENVVVGKILKIDSHPNAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + +Q+ GA NV G + A + +P + + K+RG S GMM Sbjct: 61 KLVVCQVEVGEGKTVQICTGAKNVSEGDIVPVALDKAKLP-GGIKIKTSKLRGELSEGMM 119 Query: 119 CSEKELML--------SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + S D ++ +G + + L L D +ID LT NR DC Sbjct: 120 CSANELGINEFYVDDKSKDGIYLLNDFDGMEIGKDIKEALGLYDAVIDFELTANRPDCRS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + GIA + K+K I E I ++K +++ LC + VK V+ + Sbjct: 180 MIGIAREAAVTIGKKIKYPEIEVKECDEEIDFDVK--IENPDLCMRYGARIVKDVKIGPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++RL G+R I+ +VDITN+V L+ G P H FD +++ + + V+ A +GEK Sbjct: 238 PYWMQRRLIEAGVRPINNIVDITNFVMLEYGQPLHAFDLNQVKTGKIVVKTAENGEKFTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LDN E L +VI + ++AG++GG ++ D TT VL E A ++ N R+ K Sbjct: 298 LDNVERTLDDKMLVITDGEKSIALAGVMGGLNSEITDETTAVLFEGAAFNAENTRRTSKV 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMN 408 LG+ T++ R+E+GV + ++ L+ L CG IA + K K+V Sbjct: 358 LGLRTEASGRYEKGVATETSKTGVERACQLVEMLGCGRVLKG--IAEDYPTKQEKVVLNV 415 Query: 409 SEVKRLSGIDVPI--EDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + + I PI ++ ++ILE L F + ++ E+ VP +R D+E++AD+ EEI R Sbjct: 416 NPSRIIKNIGAPITLDEFVKILEDLEFKCNLKSAEEIEIEVPDFRLDMEQEADVYEEIAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKE--- 519 IYG ++I P Q+E ++ + ++ +K S + E++ +SF+S + Sbjct: 476 IYGFEKI-----PSAQLEGNVTAGVKTDKQKFMDKIKETATSIGLYEILTYSFVSPKSLD 530 Query: 520 --QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + L + +++LNP+ D S MRT+++P L N R + +FE H + Sbjct: 531 RIKLPLDSAKRNYIKLLNPLGEDTSIMRTTMMPSTLNVLYTNASRKVEQALVFECGHTF- 589 Query: 578 NDTP-EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 TP EG + G G + VD F K S+ + F S+ Sbjct: 590 --TPQEGLPIENNHLCIGMYG----------------KDVDFFVLKG---SIEKIFSSIG 628 Query: 637 SLRFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +E S +HPGR I + V G FGE HP +++ + L+ VYL Sbjct: 629 FEGYEIIPETNNSTFHPGRCATIMYKGQYV-GTFGEAHPEVIENYNLTQ-----RVYLGE 682 Query: 694 IPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVF 750 I + + +++ L RD+A +V + + G + II+ N L++ +F Sbjct: 683 IDLDLVYDNSDRTIIYNPLPKYPSTSRDIALLVKKDVYVGQIEEIIEANGQGLVESYKLF 742 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 DV+ G + +G KSVA + + T D+D+ + D+I+ + K +A LR++ Sbjct: 743 DVYTGSQIADGYKSVAYSITYRSKDKTLTDEDVAKVHDKILSELETKLDAKLRTN 797 >gi|297184108|gb|ADI20227.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11] Length = 805 Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 248/830 (29%), Positives = 398/830 (47%), Gaps = 51/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 MK + WLK +L D++ E + + LT GLEVE ++ E L + +VL+ ++P Sbjct: 1 MKISYRWLKRYLPIDLNPELVSELLTDTGLEVEGLEEVETIPGGLRGVVVGEVLTCIQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 + D I +D G + +Q+VCGAPNV G +G PG + + KI Sbjct: 61 NADRLRITTVDIGAEEAVQIVCGAPNVAAGQKVPVATVGTLLYPGG----EELKIKKSKI 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDC 168 RG S GM+C+E EL L D I+ L G S + SD + ++ LTPNR+D Sbjct: 117 RGEISLGMICAEDELGLGGDHDGILVLDAALTPGTPCSTVFNVESDFVFEIGLTPNRTDA 176 Query: 169 IGVRGIALDLVAAGLGK-LKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 +G G+A DL AA + K L + P S E+ I +++D + C + + V Sbjct: 177 MGHIGVARDLRAAMITKGLDAPKLEVPHGSTPETATNPITLNIEDENGCPAYNGTFISNV 236 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 +P+W+++ L A+GL + VD TN+V G+P H FDA I + +++R A +G Sbjct: 237 TITESPDWLKEHLIAIGLTPKNNAVDSTNFVLHTFGHPLHAFDADTIGGNTVSIRAAKAG 296 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 EK++ LD E L P + +IA + IAG++GG ++G + T ++ +E A +D + + Sbjct: 297 EKLVTLDEVERTLDPQDCIIADATKPLCIAGVLGGANSGVMETTKNIYLEGAYFDSVRVR 356 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K I +D+ YR+ERGVD I + V L+ L GGTAS ++ I Sbjct: 357 KTAKRHAINSDASYRYERGVDPNATIDAHAYAVDLLCELTGGTASARDHKGQEYFERVAI 416 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEI 463 F S+V +L G+++ E +ILE L F + E D + + VP++R DV D+ EE+ Sbjct: 417 AFSRSKVLKLIGVELTAEKMTQILELLDFEIKAIEEDMWHILVPTYRVDVTRDVDVAEEL 476 Query: 464 LRIYGVDQIKSEPLP-----LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI-- 516 LRIYG +++ P+P V D R + R V L E++N S Sbjct: 477 LRIYGFNEV---PVPDQMRISVAVHDPR----PEKTERSVLDQLTGNGFYEIMNNSLAKG 529 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + ++L +E+LNP+S D++ MR +LL G L++ N R + FE Y Sbjct: 530 TDYTALLPEVSTSLIEMLNPLSLDLNVMRNNLLFGGLQSISFNQKRQQPNLRFFERGKTY 589 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSL 635 + Y + ++G +G W +S+ D F K S+ E +S+ Sbjct: 590 GKGS--NGYYENVQLDLFAAGAQGE-EYWDSRSQPN----DYFWMKGLLESLFERLGLSV 642 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 S + Y ++ S + +G G HP +L F + + + D Sbjct: 643 SSTTAQHSLYGEY------VVFKSGKSTIGCLGTVHPKVLKHFDIKGAVVHTSINWDQCK 696 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQ 754 +R + +L V+RD+A +VD+ L + I V + L+ +V +FDV+ Sbjct: 697 NLVLQRGAS-LFNNLPKFPSVRRDIALLVDRSEQYHNLQDCILQVGKGLLINVFLFDVYD 755 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G L KKS AI ++ Q T D + + RIV+ + K+T AVLR Sbjct: 756 GDRLPADKKSYAIGMIFQDANKTLNDKAVDKTVQRIVDQLNKRTGAVLRQ 805 >gi|227889548|ref|ZP_04007353.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] gi|227850026|gb|EEJ60112.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii ATCC 33200] Length = 804 Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 230/810 (28%), Positives = 401/810 (49%), Gaps = 39/810 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD L+ D +++ + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLNLDEDPKELGEKITRTGVEIASVDHPAEGLKKLVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVDVGEEEPIQIVCGAPNVAAGEDVIVALHGARIAGNEKI-KRSKIRGIKSNGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + I P D V G + + L ++D I+D +TPNR+D + + Sbjct: 120 GLQEIGFEDKVVPAKYADGIFVFPKDTDVKPGEEVYEALGMNDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K K + E+ +D+ L F + + V+ +P Sbjct: 180 EGAAYEVGAIIDEKPKVEPVVLKADGPDWTQELDVQVDEK-LAPKFYLRKISNVKIGESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA D L VR+A EK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDARTFKDGKLEVRKANKNEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +++E +L P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 299 NDKEVELDPNDIIITDGQKPVMMAGVMGGKNSEVEDDTTDVILESAVFDGTSVRKSALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 T++ RFE+GV+ L L+ + GT ++ I A + P + S Sbjct: 359 ANRTEASSRFEKGVNWDNTQKALDMAALLLRNDADGTVNEGEIKATDAQRSPSVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G ++ + +I ++LGF+V G D+ V+VP+ R D+ ADLVEE+ RIYG Sbjct: 419 YINKVLGTELSRAEMEKIFDQLGFTVAGSEDELVVTVPNRRWDISIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D +KS +P LP T S +++ R +K ++ + +ME +++S S E+++ F Sbjct: 479 DNLKSTQPLLPETH----GGYSAKETAMRRIKDIVQGQGLMEAISYSLTSPEKAISFTKD 534 Query: 528 QRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQ 584 + +E+ P+++ S MR +L+ GL+ A N+ R + A+FE VY EN+T Sbjct: 535 PKPVVEVQWPLNSSRSTMRENLITGLVDAASYNMARKQKELALFEQGRVYDHENNTFNEH 594 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESG 643 +++A SG + + + +D + K ++ + + + + + Sbjct: 595 EHLATLY---------SGHTLAANWQHLDQKIDFYFVKGQLTNLFRAIGIKDEDVEYRAE 645 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQKKR 701 HP R+ I + + V G G + LD + I +E+ LD+I K Sbjct: 646 LVQGMHPTRTAGIYINDQYV-GLIGMLAHAVTTLDKALRGSEIYVYEIDLDAIVSMLHKG 704 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 K K + ++RDL+ +V + + IK N + + D+ V DV+ G + Sbjct: 705 MKAKAAPKFPA---IERDLSLLVPNDVTNAQIEAQIKLNGGKYLYDIRVIDVYAGSQIES 761 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 G KS++ + KDT D+ + M+RI Sbjct: 762 GHKSISYSLTFLNEKDTLTDEVVATAMERI 791 >gi|22298204|ref|NP_681451.1| phenylalanyl-tRNA synthetase subunit beta [Thermosynechococcus elongatus BP-1] gi|22294383|dbj|BAC08213.1| phenylalanyl-tRNA synthetase [Thermosynechococcus elongatus BP-1] Length = 841 Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 241/848 (28%), Positives = 410/848 (48%), Gaps = 71/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ + D+ + + D LT G EVE +++R + +V +L+ E +P+ Sbjct: 21 MRVSLRWLRELVAVDLDVTMLADRLTMAGFEVEDIEDRRTWAEGVVVGYILACEPHPNAQ 80 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +VCGAPN GL A PG+ + + ++ + K+RG++S GM+ Sbjct: 81 KLRVCQVDVGQGEPRTIVCGAPNAAAGLYVPVALPGAYLAKIDLKIRPAKLRGVKSEGMI 140 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L+ +S I VG + L L D I+ ++ T NR+D + + GIA ++ Sbjct: 141 CSLAELGLTKESEGIHTFTDAVTVGEDVRPLLGLDDVILHLTSTANRADALSMVGIAREV 200 Query: 179 VAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A L ++ P P + ++ + D C + + V+ +P Sbjct: 201 AA-----LTGAPLTLPTPRAIAPKKSGAKGPVQLAIADPQACPAYCGTLITHVQIAPSPL 255 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGE 285 W++QRL+A GLR+I+ +VDITNY+ L G P H FD R+ V + VR A +GE Sbjct: 256 WLQQRLEAAGLRAINNVVDITNYILLKWGQPLHAFDWDRLQKVAAQTPVSVGVRFAKAGE 315 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + LD QE LS +N++I + ++AG++GG+ T +V +E AL+ I R Sbjct: 316 TLKTLDGQERRLSSENLLITAGDVPVALAGVMGGEETEVHPGTQNVFLEAALFASPVIRR 375 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 S + G+ T++ R+ERGV+ + ++L+ + GT SD +A R + Sbjct: 376 SARAQGLRTEASARYERGVNPAELEAATAEAIALLKEIAQGTVSDTTLADQRPPLERTLT 435 Query: 406 FMNSEVKRLSGIDVP-IEDS-----------LRILERLGF------SVIGEYDKFEVSVP 447 +V RL G V EDS +L RLGF ++ E + V+VP Sbjct: 436 LRLEQVHRLLGAVVSEAEDSDEPAYLDPETVEELLSRLGFHLSRQETLEDELVVWSVTVP 495 Query: 448 SWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 +R +D+E + DL+EEI R+YG D+ + E LP Q E L L+ + R V+ Sbjct: 496 PYRFRDIEREVDLIEEIARLYGYDRFE-ETLP-AQTEVG-ALPLELTLLREVRAAFRGAG 552 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + E++++S++ GG ++ ++NP+ A+ S++RT L+ GL++A N ++ Sbjct: 553 LTELMHYSWVK-------GGQPNQVTVVNPLVAEFSSLRTDLITGLVQAFRYNHEQGNPP 605 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF---VDLFDAKA 623 FE+ V+ D ++ + R G GI G G W K R + + ++AK Sbjct: 606 LNGFEIGRVFGQD----EEGLWENDRLG--GIIG-GDPWQGKWVRRSQQPQPLTWYEAKG 658 Query: 624 DALSVIEPF---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 SV + F V S R + HPGR+ ++ E LG FG+ HP + Sbjct: 659 ILESVFQRFGLNVEYQSDRHDER----LHPGRTAVLCLQGE-RLGIFGQLHPQYAATLEI 713 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 I FE+ L+ + ++R + S+ RDLAF + L I Sbjct: 714 PAAIYVFELDLEVLLSRLEERYRQIVFQPFSTYPASDRDLAFFAPTALTVAELSRTIWKA 773 Query: 741 ----DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 D ++ V +FD + G + G++S+A ++ + T + ++ L RI +++V+ Sbjct: 774 AGGRDSFLESVELFDEYSGSGVPAGQRSLAFRLTYRASDRTLTEAEVNELHQRIRDSLVE 833 Query: 797 KTNAVLRS 804 K LRS Sbjct: 834 KYAVTLRS 841 >gi|259503590|ref|ZP_05746492.1| phenylalanyl-tRNA synthetase [Lactobacillus antri DSM 16041] gi|259168414|gb|EEW52909.1| phenylalanyl-tRNA synthetase [Lactobacillus antri DSM 16041] Length = 805 Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 224/824 (27%), Positives = 411/824 (49%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + WLK++L+ DV ++ + + +++ V + + L + V+S E +PD D Sbjct: 1 MKVSYQWLKEYLEIDVEPHELAEKIARTSVDINDVYSPSDGLKKIVVGDVVSCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + IQ+VCGAPNV+ G + A G+ I +N+ + KIRG +S GM+ Sbjct: 61 HLHVCQVNVGEAEPIQIVCGAPNVQAGKKVIVALHGARI-GDNVKIKRGKIRGQQSNGML 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +EL SD A I LP DA G + YL + D IID +TPNR D + + Sbjct: 120 CALQELGFSDKVAPKDYDDGIYFLPDDAQPGDSVFPYLGMDDVIIDTDVTPNRGDMLSIY 179 Query: 173 GIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G D+ A GL KE+ + + ++ ++ + D + + + + GV + Sbjct: 180 GNINDIAAFYGLKPHFKELAVKEN-ADQAASDQLTAAVADQKIAPTYKLRVINGVTVADS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W++ +L G+R ++ +VD+TNYV L G P H +D ++ VR A + E++ Sbjct: 239 PLWLQIKLWNSGIRPVNNVVDVTNYVLLKYGQPLHSYDYDQLPGHDFGVRHAHAEEQLTT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E L+ +++V+ + + ++AG +G + +T V +E A++DPI + + + Sbjct: 299 LDGDEQTLNENDIVVTAADQPVALAGTMGSQGTAVSADTKTVALEAAIFDPIMVRKQARR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMN 408 L + +++ RFERG++ + L LI L GG AS I A + ++I Sbjct: 359 LDLHSEASMRFERGINPATVETALNEAAELISELAGGQVASGIVTANEKPAEDKQITLSL 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 +++ + G + ++ I ERL F V + + D+ V+VP+ R D+ ADL EEI RIY Sbjct: 419 AKINHVLGTKLSQDEVTAIFERLAFPVKVVDADQLTVTVPARRWDIFVVADLYEEIARIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G D + + LP+ + LS +Q R + + + + +++S +++++ F Sbjct: 479 GYDNLPAT-LPV-MTRNHGGLSPRQKFLRASRHEMEGMGLTQAISYSLTTEDKAKQFQIS 536 Query: 528 --QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTPE 582 +++ P+S+D R SL+ GLL NV R + + A++E V+ + PE Sbjct: 537 PLAEPMKLDFPMSSDHVATRMSLISGLLIDVAYNVARNVNNVALYEAGRVFLPKGGERPE 596 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q+++A I +G+L ++ + + VD F K + ++ + + Sbjct: 597 EQEHLAGAI---------TGQLLANSWHTQDQPVDFFQVKGIVERYLHNLGLAGTVTYRA 647 Query: 643 GAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HPGR+ I + ++V G+ G+ HP + + FE+ L+++ + K Sbjct: 648 TQDRAEMHPGRTANIYVADQLV-GFVGQVHPQTAKAYKVPATYV-FELNLEALLAADKVA 705 Query: 702 TKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLG 759 + H S +P + RD+A +VD+++ +V +I+ + V +FDV+ G L Sbjct: 706 NE----YHPISKYPAITRDIALLVDRNVTNADVVAVIEQQGGAFLKKVHLFDVYSGLHLP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GKKS+A + Q DT +D + D++ + K A +R Sbjct: 762 KGKKSLAYTLTYQDDHDTLTEDQVNKAFDKVTRALETKLAAEIR 805 >gi|268319889|ref|YP_003293545.1| hypothetical protein FI9785_1418 [Lactobacillus johnsonii FI9785] gi|262398264|emb|CAX67278.1| pheT [Lactobacillus johnsonii FI9785] Length = 804 Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 229/809 (28%), Positives = 400/809 (49%), Gaps = 37/809 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD L+ D +++ + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLNLDEDPKELGEKITRTGVEIASVDHPAEGLKKLVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVDVGEEEPIQIVCGAPNVATGEDVIVALHGARIAGNEKIKR-GKIRGIKSNGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + I P DA V G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFEDKVVPAKYADGIFVFPKDADVKTGEEVYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K K + E+ +D+ L F + + V+ +P Sbjct: 180 EGAAYEVGAIIDEKPKVEPVVLKADGPDWTQELDVQVDEK-LAPKFYLRKISNVKIGESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA D L VR+A EK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDARTFKDGKLEVRKANKNEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +++E +L P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 299 NDKEVELDPNDIIITDGQKPVMMAGVMGGKNSEVEDDTTDVILESAVFDGTSVRKSALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 T++ RFE+GV+ L L+ + GT ++ I A + P + S Sbjct: 359 ANRTEASSRFEKGVNWDNTQKALDMAALLLRNDADGTVNEGEIKATDAQRSPSVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G ++ + +I ++LGF+V G D+ V+VP+ R D+ ADLVEE+ RIYG Sbjct: 419 YINKVLGTELSRAEMEKIFDQLGFTVAGPEDELVVTVPNRRWDISIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D +KS +PL E S +++ R +K ++ + +ME +++S S E+++ F Sbjct: 479 DNLKSTQPL---LAETHGGYSAKETAMRRIKDIVQGQGLMEAISYSLTSPEKAISFTKDP 535 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 + +E+ P+++ S MR +L+ GL+ A N+ R + A+FE VY EN+T + Sbjct: 536 KPVVEVQWPLNSSRSTMRENLITGLVDAASYNMARKQKELALFEQGRVYDHENNTFNEHE 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 ++A SG + + + +D + K ++ + + + + + Sbjct: 596 HLATLY---------SGHTLAANWQHLDQKIDFYFVKGQLTNLFRAIGIKDEDVEYRAEL 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQKKRT 702 HP R+ I + + V G G + LD + I +E+ LD+I K Sbjct: 647 VQGMHPTRTAGIYINDQYV-GLIGMLAHAVTTLDKALRGSEIYVYEIDLDAIVSMLHKGM 705 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 K K + ++RDL+ +V + + IK N + + D+ V DV+ G + G Sbjct: 706 KAKAAPKFPA---IERDLSLLVPNDVTNAQIEAQIKLNGGKYLYDIRVIDVYDGSQIESG 762 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS++ + KDT D+ + M++I Sbjct: 763 HKSISYSLTFLNEKDTLTDEVVATAMEKI 791 >gi|304384705|ref|ZP_07367051.1| phenylalanyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] gi|304328899|gb|EFL96119.1| phenylalanyl-tRNA synthetase beta subunit [Pediococcus acidilactici DSM 20284] Length = 810 Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 220/828 (26%), Positives = 409/828 (49%), Gaps = 43/828 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 MK + WL +LD +++ + + + + +EV+ V + L + L V +PD Sbjct: 1 MKLSYQWLSKYLDLSNIEPQDLAEKIERTAVEVDSVTRLDYKLKKIVVGHTLEVVDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ+VCGAPN+ + A GS I ++N+ + K+RG+ S GM Sbjct: 61 DHLHICQVDVGEEEPIQIVCGAPNIAADQDVIVALHGSRI-KDNVKIKRSKMRGVPSNGM 119 Query: 118 MCSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCI 169 +C+ +E+ D I P D+ V G + + L ++D +ID S+TPNR D Sbjct: 120 ICALQEIGFPDSVVPKKYVDGIYVFPADSNVHPGDSVMEVLGMNDDVIDTSVTPNRGDMF 179 Query: 170 GVRGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A ++ A + + + ++ + +IK ++ D L + M + V+ Sbjct: 180 SMNGNAHEIAAILDQTAQFEAVPEVTSVTDAKLSDQIKVEIADDQLAPVYKMRGIDQVKV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ L VG+R I+ +VD+TNYV L G P H +D ++ + V +A + Sbjct: 240 TDSPFWLQTLLMKVGIRPINNVVDVTNYVMLKYGQPLHAYDLDQLQGKTVGVAKAEADTS 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD +E L +++V+ +DG+ ++AG++GG + + T+ V++E A++DPI + ++ Sbjct: 300 FTTLDGEERQLRDEDLVVTADGQPIALAGVMGGLTSEVEPTTSRVVLEAAIFDPIKVRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 + + +++ RFERG+D + L V+LI G A D + T +P K+ Sbjct: 360 ARFHNLHSEASMRFERGIDYGAVTDALNEAVALISEFGKGQAYPDEVVGAATTKEPAKVA 419 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEI 463 +++ R+ G + I + I RLGF+V + + FEV+VP R D+ +ADL+EEI Sbjct: 420 ITLAKINRVLGTTLTISEVEAIFARLGFAVTTDENAETFEVTVPVRRWDIHLQADLLEEI 479 Query: 464 LRIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 RIYG D + P+ L T L+ +Q R +++L + + +++ + +S Sbjct: 480 ARIYGYDNL---PVTLPTGAPTVGQLTEKQKIMRNSRQILEGLGLTQAMSYGLTTVAKSQ 536 Query: 523 LFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 F E +++ P++ D +R +L+ GLL N R + D A++E V+ + Sbjct: 537 NFLKQTTEPVKVAWPMTLDHEALRMNLVSGLLDDVAYNHARFVDDVALYEQGRVFYSVEG 596 Query: 582 EGQ----KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + Q +++A I +G L + + + V FDAK ++ Sbjct: 597 QAQPREVEHLAGAI---------TGSLQATTWNQPQQNVSFFDAKGIVEKYLQNMALEGQ 647 Query: 638 LRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 +++ + HPGR+ I +++ G+ G+ HP + + N FE+ L I I Sbjct: 648 IKYVADQDRKGMHPGRTADIYLDDQLI-GFVGQVHPTTAQEYKI-NETYVFELNLSKI-I 704 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 K+ + +V+ S + RD+A +V + + ++++I+ + + DV +FDV+ G Sbjct: 705 DAPKQMQHYEVI--SKYPAITRDVALLVAEEVTNEQVLDVIQGTKQKYLTDVKLFDVYAG 762 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L G KS+A Q+ Q T ++D + ++VE + + A +R Sbjct: 763 NHLDAGTKSLAYQLTYQDRNATLQEDTVNQEFAKVVEQLETQLGATIR 810 >gi|254852908|ref|ZP_05242256.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] gi|258606244|gb|EEW18852.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503] Length = 802 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 227/826 (27%), Positives = 412/826 (49%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + + G+A ++ A K + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGAIIHQKPAQPTEPDVFEKGKADDFISVEVENPAETPYYAIKMVENIEIK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E+I Sbjct: 237 ESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQEEI 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I ++ Sbjct: 297 TTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGKAS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 357 RELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKIET 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ RI Sbjct: 417 SLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVARI 476 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 YG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 477 YGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRLAL 533 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT-P 581 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D P Sbjct: 534 SDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDNLP 593 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 Q+++A I +G + ++ + VD F K ++ L ++ Sbjct: 594 IEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELHWK 644 Query: 642 SGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ-K 699 HPGR+ +I EI GY G HP + + L E Y+ I ++ Sbjct: 645 QTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLK------ETYVFEINVAALL 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|317486900|ref|ZP_07945710.1| phenylalanyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] gi|316921775|gb|EFV43051.1| phenylalanyl-tRNA synthetase [Bilophila wadsworthia 3_1_6] Length = 799 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 226/813 (27%), Positives = 399/813 (49%), Gaps = 37/813 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +L WL++ + + +++ D LT +GLE+E + + +A+ + VL+ E +PD D Sbjct: 1 MLLSLKWLREFVPVEAGAQEVGDRLTMLGLELEDIIHPYDAIKDIVVGHVLTKEAHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 A+ +D G+ + + +VCGAPNV G A G+ +P M++ K+RG+ S GM+ Sbjct: 61 HLAVCTVDAGQEEVLNIVCGAPNVAAGQKVPVALVGTTMP-GGMVIKKAKLRGVPSFGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LS+D IM LP VG RL D L+L I+++ +TPNR DC+ V G+A + Sbjct: 120 CSERELGLSEDHNGIMVLPEGFKVGTRLIDALDLDTEILEIGITPNRGDCLSVLGLAREA 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A L + E ++ + LC + + V+GV +P WMR RL Sbjct: 180 ALAFKLPLTLPKVHVEAQGADWSSEWAVNIPNPDLCPFYQLRLVEGVTIRQSPMWMRHRL 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT-VRRACSGEKILALDNQEYDL 297 AVG+R IS +VD+TNY+ ++ G P H FD ++ T + A GE+I+ LD QE L Sbjct: 240 HAVGVRPISNIVDVTNYILMELGQPLHAFDRDKLEGGRTEISVARDGERIVTLDGQERVL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +++I + ++AG++GG D + +V+VE A++ P I ++ + L + +++ Sbjct: 300 TFADLLIRDGMKPVALAGVMGGLDTEISDASRNVMVESAVFRPETIRKTARRLALASEAS 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD + VSL+ L GG + C + F L G Sbjct: 360 YRFERGVDQINSRFAMDRAVSLMAELSGGVVRTGACTQEPKLWAAPHPRFRVQRTVDLLG 419 Query: 417 IDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 +DV LERLG + + ++V+ PSWR D+ + DL+EEI R+ G+D I E Sbjct: 420 MDVEPAFCADTLERLGCGLDRSDGADWKVTTPSWRSDLSREVDLIEEIARVKGMDTI-PE 478 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISKEQSVLFG-GGQREL 531 LP R +SR ++ R+ A + E N+SF+ + G + + Sbjct: 479 TLPAVSRPLDR-FGQPESRYGFLSRIKAWGRGLGLNEAENYSFVGHKDLDHLGLSKEGRI 537 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 +I+NP++ + + +RT + P LL+ N+ +FEV++V+E D P Q Sbjct: 538 DIINPLTEEQNVLRTEIAPSLLQNVRTNIAHGNMGVRLFEVANVFEAD-PASQTTAKESA 596 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW---- 647 R G ++ + ++ AD ++E F + +L AP + Sbjct: 597 RLGMV-------MYGSLYDTAWPNAEIDAGYADIRGLVEHFAAFLNL----SAPVFTRDE 645 Query: 648 -YHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI-PISQKKRTKT 704 HP + ++ + + +G G+ + D + PI E+ L+++ + + R Sbjct: 646 NTHPFLAPCVRVTVDGKPVGVVGQVKAQLADAYHARKPIWLAELDLETLWDLHRAARIVF 705 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 K LS RD+ I + + I+++ +++DVT+ D+++ K E + Sbjct: 706 KA---LSVFPASSRDVTVIAPLTLSVAAVEKHIRDMRIAILEDVTLIDLYEPKDTEE--R 760 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 ++ ++ + T +D ++ +++ ++++K Sbjct: 761 NLTFRLTFRKADRTLKDAEVDKEREKVAQSLIK 793 >gi|270290413|ref|ZP_06196638.1| phenylalanyl-tRNA synthetase, beta subunit [Pediococcus acidilactici 7_4] gi|270281194|gb|EFA27027.1| phenylalanyl-tRNA synthetase, beta subunit [Pediococcus acidilactici 7_4] Length = 810 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 220/828 (26%), Positives = 409/828 (49%), Gaps = 43/828 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 MK + WL +LD +++ + + + + +EV+ V + L + L V +PD Sbjct: 1 MKLSYQWLSKYLDLSNIEPQDLAEKIERTAVEVDSVTRLDYKLKKIVVGHTLEVVDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + IQ+VCGAPN+ + A GS I ++N+ + K+RG+ S GM Sbjct: 61 DHLHICQVDVGEEEPIQIVCGAPNIAADQDVIVALHGSRI-KDNVKIKRSKMRGVPSNGM 119 Query: 118 MCSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCI 169 +C+ +E+ D I P D+ V G + + L ++D +ID S+TPNR D Sbjct: 120 ICALQEIGFPDSVVPKKYVDGIYVFPADSNVHPGDSVMEVLGMNDDVIDTSVTPNRGDMF 179 Query: 170 GVRGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A ++ A + + + ++ + +IK ++ D L + M + V+ Sbjct: 180 SMNGNAHEIAAILDQTAQFEAVPEVTSVTDAKLSDQIKVEIADDQLAPVYKMRGIDQVKV 239 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ L VG+R I+ +VD+TNYV L G P H +D ++ + V +A + Sbjct: 240 TDSPFWLQTLLMKVGIRPINNVVDVTNYVMLKYGQPLHAYDLDQLQGKTVGVAKAEADTS 299 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD +E L +++V+ +DG+ ++AG++GG + + T+ V++E A++DPI + ++ Sbjct: 300 FTTLDGEERQLRDEDLVVTADGQPIALAGVMGGLTSEVEPTTSRVVLEAAIFDPIKVRKT 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 + + +++ RFERG+D + L V+LI G A D + T +P K+ Sbjct: 360 ARFHNLHSEASMRFERGIDYGAVTDALNEAVALINEFGKGQAYPDEVVGAATTKEPAKVA 419 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE--YDKFEVSVPSWRQDVEEKADLVEEI 463 +++ R+ G + I + I RLGF+V + + FEV+VP R D+ +ADL+EEI Sbjct: 420 ITLAKINRVLGTTLTISEVEAIFARLGFAVTTDENAETFEVTVPVRRWDIHLQADLLEEI 479 Query: 464 LRIYGVDQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 RIYG D + P+ L T L+ +Q R +++L + + +++ + +S Sbjct: 480 ARIYGYDNL---PVTLPTGAPTVGQLTEKQKIMRNSRQILEGLGLTQAMSYGLTTVAKSQ 536 Query: 523 LFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 F E +++ P++ D +R +L+ GLL N R + D A++E V+ + Sbjct: 537 NFLKQTTEPVKVAWPMTLDHEALRMNLVSGLLDDVAYNHARFVDDVALYEQGRVFYSVEG 596 Query: 582 EGQ----KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + Q +++A I +G L + + + V FDAK ++ Sbjct: 597 QAQPREVEHLAGAI---------TGSLQATTWNQPQQNVSFFDAKGIVEKYLQNMALEGQ 647 Query: 638 LRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 +++ + HPGR+ I +++ G+ G+ HP + + N FE+ L I I Sbjct: 648 IKYVADQDRKGMHPGRTADIYLDDQLI-GFVGQVHPTTAQEYKI-NETYVFELNLSKI-I 704 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 K+ + +V+ S + RD+A +V + + ++++I+ + + DV +FDV+ G Sbjct: 705 DAPKQMQHYEVI--SKYPAITRDVALLVAEEVTNEQVLDVIQGTKQKYLTDVKLFDVYAG 762 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L G KS+A Q+ Q T ++D + ++VE + + A +R Sbjct: 763 NHLDAGTKSLAYQLTYQDRNATLQEDTVNQEFAKVVEQLETQLGATIR 810 >gi|323340751|ref|ZP_08081003.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] gi|323091874|gb|EFZ34494.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus ruminis ATCC 25644] Length = 804 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 232/834 (27%), Positives = 414/834 (49%), Gaps = 61/834 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK + WL D++ D + + + + +EV+ ++ L + VL + +PD Sbjct: 1 MKVSTKWLNDYVKVDDLDPLALSEKIERTAVEVDDTYKMQDGLKKIVVGHVLETKAHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + Q+VCGAPNV G + A P S I +N+ + K+RG+ S GM Sbjct: 61 DHLHICQVDIGEEEPSQIVCGAPNVAAGQKVIVALPNSRIA-DNVKIKKSKMRGVVSEGM 119 Query: 118 MCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +E+ S+ A I LP DA G + YL + + IIDV +TPNR D + + Sbjct: 120 ICALQEIGFSETIAPKAYAEGIYVLPEDAKPGDPVYPYLGMDEDIIDVDITPNRGDMLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 RG+A ++ G +++ ++ P S E I + + + L + M +K V Sbjct: 180 RGVAYEV---GAIYDRKVTLNHPEVKEASDEKIEDYVSIEAPEE-LVAPYLMRIIKDVEI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W+++RL G+R I+ +VD+TNY+ LD G P H FD ++ S + VR A GEK Sbjct: 236 KDSPLWLQKRLWNAGIRPINNVVDVTNYILLDYGQPLHSFDYDKLGSKKIVVRLAEEGEK 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD +E +L +++V+ + ++AG +GG + TT + +E A+++ NI ++ Sbjct: 296 MTTLDGEERELKANDIVVTNGEVPVALAGTMGGLDSEVVPETTTIALESAVFNGHNIRKT 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIV 405 + + +++ RFERG++ + L +I L G S + A + + +++ Sbjct: 356 SRRENLHSEASMRFERGINKATVAEALDAAAQMIAELGNGQVVSGVAKANDKKAEAKEVK 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++ ++ G + ++ I RLGF D F VSVP R D+E ADL+EE+ R Sbjct: 416 ITLKKINKVLGTSLTEQEVEDIFRRLGFGTAFSEDTFTVSVPPRRWDIEIDADLLEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D + P L Q + + +Q R +R+L + + +++ + E++ F Sbjct: 476 IYGYDNL---PTTLPQGPTTPGHYTYKQKVIRQTRRLLEGAGLTQAISYGLTTAEKARRF 532 Query: 525 GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----END 579 E E+ P+++D + R +L+ GLL N R + + +++E V+ +ND Sbjct: 533 AMEPAETTELAFPMTSDRTTARMNLVSGLLDDVAYNAARKVENVSLYEQGRVFLRDKDND 592 Query: 580 TPEGQKYMAAGI----RKGSSGIEGSGRLWSDKSEERCRFV--DLFDAKADALSVIEPFV 633 P +++A + RK + W D ++ + D ++L+V Sbjct: 593 RPHEVEHVAGALTGLFRKST---------WHDDKLAAGFYLAKGIVDFLLNSLAV----- 638 Query: 634 SLDSLRFESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 S R E A S + HPGR+ I + + GY GE HP++ + L + FE+ Sbjct: 639 ---SGRIEYRATSSHEAMHPGRTADIYLDDDFI-GYVGEVHPSVAKEYRLKR-VYVFELN 693 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTV 749 L I + KK + + V S V RD+A +V + +V+ I KN + D+ + Sbjct: 694 LQKIIDAPKKESIYEPV---SKYPTVSRDIALVVPIEVTNQQIVDCIKKNGGAYLKDIRL 750 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV++G+++G+G +S+A + K T +D+++ D+I + ++ NAV+R Sbjct: 751 FDVYKGENIGKGFRSLAYTLQFSNSKQTLQDEEVSRPFDKIKNKLKEEFNAVIR 804 >gi|229820863|ref|YP_002882389.1| phenylalanyl-tRNA synthetase, beta subunit [Beutenbergia cavernae DSM 12333] gi|229566776|gb|ACQ80627.1| phenylalanyl-tRNA synthetase, beta subunit [Beutenbergia cavernae DSM 12333] Length = 832 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 249/849 (29%), Positives = 400/849 (47%), Gaps = 71/849 (8%) Query: 5 LSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 L WL +H L ++++ L +GLE E++ P T+ +V++ + Sbjct: 6 LPWLAEHAELAAGTGVDEVAADLVRVGLEEEEIHTSGVTGPLTVGRVVTYADEKQKNGKT 65 Query: 63 LR---IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +R +D G+ +VCGA N V L V A PG+ +P + + RK G S GM+C Sbjct: 66 IRWCQVDVGEDSPRGIVCGAHNFAVDDLVVVALPGAVLP-GDFAITARKTYGHVSDGMIC 124 Query: 120 SEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL L +D I+ E+ D G + L L + ++++++TP+R C VRG+A Sbjct: 125 SARELGLGEDHEGILVLTEVADDVGPGTDAIELLGLGESVLEINVTPDRGYCFSVRGVAR 184 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDSSLCKG------FAMCCVKGV 225 + A G + + P S + P D L D + +G F V+GV Sbjct: 185 EYALATGGAYTDPGLPVPAGSATPPPSPTQDGFAVVLADDAPIRGAQGADRFVARVVRGV 244 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 +P+WM++RL+ G+R +S VD+TNYV L+ G P+H +D ++ + VRRA +G Sbjct: 245 DVAAPSPDWMQRRLRQSGMRPVSLPVDVTNYVMLELGQPTHAYDLGTLTAPIVVRRARAG 304 Query: 285 EKILALDNQEYDLSPDNVVI--ASDG---RIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 E++ LD+ + L P++++I + DG R IAG++GG T DVLVE A +D Sbjct: 305 ERMTTLDDVDRRLDPEDLLITDSPDGEGSRAIGIAGVMGGAATEVGPLTRDVLVEAAHFD 364 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVL-KHIVSLILSLCGGTASDICIARNIT 398 + IAR+ + + +++ RFERGVD + + PV + +V L++ L GG A + + T Sbjct: 365 TVTIARAARRHRLPSEASRRFERGVDPE-LPPVAAQRVVDLLVQLGGGRADEAVTDVDAT 423 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEY-DKFEVSVPSWRQDVEEK 456 P IV L G+ ++ L LG V GE EV+ P+WR D+ E Sbjct: 424 TAPATIVLGTHLPASLVGVPYTEQEVTETLRALGADVRAGELAGTVEVTPPTWRPDLVEP 483 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DLVEE++R+ G + I S + R LS R V+R LA +++V+ + F+ Sbjct: 484 VDLVEEVVRLRGYEAIGSI---VPAAPAGRGLSRDAWLRRSVERALAEAGLVQVLTYPFV 540 Query: 517 SKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S G + L + NP++ + +RTSLL L A RN+ R AI E Sbjct: 541 SPGVHDALGEHADDPRRHALRLANPLTEEAPELRTSLLATLTAAAARNLGRGAERVAITE 600 Query: 572 VSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 V P+G Y G E +L + ++ R V ADA Sbjct: 601 TGMVTHGRAVPSLLPDGGAY---------PGDEIVAQLEA-AVPDQPRHVAAVVTHADAE 650 Query: 627 SVIEPFVSL------DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 +VI + L D S +HPGR + T+ + +LG+ GE P + L Sbjct: 651 AVIGLVLRLARVLGVDVALAADPDRSPFHPGRCARV-TAGDTLLGHAGELAPQVCAALEL 709 Query: 681 SNPICGFEVYLDS----IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 FE+ LD+ +P+ + T+ LS+ K D+A +VD+ +PA ++ Sbjct: 710 PARTVAFELDLDALVAAVPLEPVRPTR------LSTFPVAKEDVALVVDEAVPAADVLAA 763 Query: 737 IK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 ++ L + V +FDV+ G LG GKKS+A + ++ T + + D +V Sbjct: 764 VRAGAGELAESVELFDVYTGDQLGAGKKSLAFALRLRADDRTLTAAETAEVRDAVVAEAG 823 Query: 796 KKTNAVLRS 804 ++ VLR Sbjct: 824 QRVGGVLRG 832 >gi|42519500|ref|NP_965430.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|66773925|sp|Q74IE2|SYFB_LACJO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|41583788|gb|AAS09396.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] Length = 804 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 229/809 (28%), Positives = 399/809 (49%), Gaps = 37/809 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D + + + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLDLDEDPKDLGEKITRTGVEIASVDHPAEGLKKIVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++D G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVDVGEEEPIQIVCGAPNVAAGEDVIVALHGARIAGNEKI-KRGKIRGIKSNGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + I P DA V G + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFEDKVVPAKYADGIFVFPKDADVKPGEEVYKALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K K + E+ +D+ L F + + V+ +P Sbjct: 180 EGAAYEVGAIVDEKPKVEPVVLKEDGPDWTNELDVQVDEK-LAPKFYLRKISNVKIGESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA D L VR+A EK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDARTFKDGKLEVRKANKNEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +++E +L P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 299 NDKEVELDPNDIIITDGQKPVMMAGVMGGKNSEVEDDTTDVILESAVFDGTSVRKSALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 T++ RFE+GV+ L L+ + GT ++ I A + P + S Sbjct: 359 ANRTEASSRFEKGVNWDNTQKALDMAALLLRNDADGTVNEGEIKATDAQRNPSVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G ++ + +I ++LGF+V G D+ V++P+ R D+ ADLVEE+ RIYG Sbjct: 419 YINKVLGTELSRAEMEKIFDQLGFTVAGSEDELVVTIPNRRWDISIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D +KS +PL E S +++ R +K ++ + +ME +++S S E+++ F Sbjct: 479 DNLKSTQPL---LAETHGGYSAKETAMRRIKDIVQGQGLMEAISYSLTSPEKAISFTKDP 535 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 + +E+ P+++ S MR +L+ GL+ A N+ R + A+FE VY EN+T + Sbjct: 536 KPVVEVQWPLNSSRSTMRENLITGLVDAASYNMARKQKELALFEQGRVYDHENNTFNEHE 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 ++AA SG + + + +D + K ++ + + + + + Sbjct: 596 HLAALY---------SGHTLAANWQHLDQKIDFYFVKGQLTNLFRAIGIKDEDVEYRAEL 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQKKRT 702 HP R+ I + + + G G + LD + I +E+ LD+I K Sbjct: 647 VQGMHPTRTAGIYINDQYI-GLIGMLAHAVTTLDKALRGSEIYVYEIDLDTIVSMLHKGM 705 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 K K + ++RDL+ +V + + IK N + + D+ V DV+ G + G Sbjct: 706 KAKAAPKFPA---IERDLSLLVPNDVTNAQIEAQIKLNGGKYLYDIRVIDVYAGSQIESG 762 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS++ + KDT D+ + M++I Sbjct: 763 HKSISYSLTFLNEKDTLTDEVVATAMEKI 791 >gi|33519816|ref|NP_878648.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Blochmannia floridanus] gi|81666790|sp|Q7VR66|SYFB_BLOFL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33504161|emb|CAD83423.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Blochmannia floridanus] Length = 803 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 235/827 (28%), Positives = 415/827 (50%), Gaps = 48/827 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPDL 58 MKF+ SW+++ ++ + +++ D T GL VE+ N I K++ + +P L Sbjct: 1 MKFSESWIREWVNPPIDHDQLIDQFTLAGLNVEESRKLNSNKFYGIVIAKIIECQVHPSL 60 Query: 59 -DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I+ +++G I ++ N V A G+ +P N+I + I+G +S G+ Sbjct: 61 ADTWIMTVNSGGGNIINIITNNMNYNKNTKVVVANIGAILPNGNIIKQIN-IQGRKSEGV 119 Query: 118 MCSEKELMLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 +C+ L L+ + I+ELPIDAP+G DYL +D IID+++TPNR DC+ V G++ Sbjct: 120 LCTFSMLGLNYYTQKGIIELPIDAPIGCNFYDYLHFNDNIIDINITPNRGDCLSVIGLSR 179 Query: 177 DLVAAGLGKLKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 ++ A KLK+INI + P ++IP+ I+ D C F +K + + P Sbjct: 180 EIAAINQCKLKKINIKSNVPNILDTIPIIIETPHD----CPKFLGKVLKNIDITIPTPLK 235 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI-LALD 291 ++++L G++ I+ + DI NYV L+ G P +FD +I +++ VR + GE + L+ + Sbjct: 236 IQEKLIRCGIQPINIITDIANYVLLELGQPVRIFDYEKIDKNIIYVRFSKPGETLTLSEN 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 N L +VI+ + +IAG+I G + +T ++ ++VA ++P+ I K Sbjct: 296 NINIKLFSKTLVISDVRKPLAIAGVITGNQSSVSCSTHNIFLKVAFFNPLTIINQYKLYN 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI--CIARNITYKPRKIVFMNS 409 + T S R+E+G+D L + SL++ C G A I+ N K + I S Sbjct: 356 LYTSSVVRYEKGIDPDISELALNYATSLLIKYCHGKAGPTINIISHNHLPKIKIIKLHRS 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ + G +P + + IL LGF V + + VS PSWR D+ + +++ EI+RIYG Sbjct: 416 KLNMILGFYIPDQKIINILTNLGFQVETQGHNWIVSTPSWRFDINIEENVISEIIRIYGY 475 Query: 470 DQIKSEPLPLT-----QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 + I P ++ Q + +SL +S+T VL +R E++ +SF+ L Sbjct: 476 NHIPKIPAKISLNQTVQCIPNQVISLSKSKT-----VLIARGYQEIITYSFVDPNIQKLL 530 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPE 582 L ++NPIS +MS MR SL GL++ N +R + +FE + + +N + Sbjct: 531 HPQCIPLTLMNPISTNMSVMRLSLWTGLIQTMLYNQNRQHKNIKLFESGICFIPKNSHSK 590 Query: 583 --GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL---DS 637 Q+ +GIR G E W + D +D K D S++ F ++ Sbjct: 591 QVSQQLRLSGIRSGLRHYEH----W----DIHTSLTDFYDIKGDVESILYLFNKKNQNNN 642 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + F+S HPG+S I + +I LGY G HP I + + + FE+ DSI Sbjct: 643 IHFKSCTYPALHPGQSAEIYLN-DIFLGYVGVIHPMIQYKLRIHSNVLVFELIWDSI--- 698 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGK 756 K++K++ +S RD++ I+ HI A +++ K + + + +V + DV+ G+ Sbjct: 699 --VNIKSQKIIDISKFPKNYRDISLIIPTHISASSVIETCKKIGIINLTEVKLIDVYTGR 756 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ KS+ I++ +Q T ++ +I+ ++ + K NA+ R Sbjct: 757 NIPTNFKSLTIKLTLQSKTHTLKEQEIKEIIIICTTTLKKHFNAIFR 803 >gi|282897764|ref|ZP_06305763.1| phenylalanyl-tRNA synthetase, beta subunit [Raphidiopsis brookii D9] gi|281197443|gb|EFA72340.1| phenylalanyl-tRNA synthetase, beta subunit [Raphidiopsis brookii D9] Length = 812 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 231/834 (27%), Positives = 419/834 (50%), Gaps = 52/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ + +WL++ ++ ++ E++ TLT G EVE +++R + ++ KV+ E++P+ D Sbjct: 1 MRISFNWLRELVEIKLTPEELAHTLTMAGFEVESIEDRRTWADGVVIGKVIKREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + + +VCGA NV + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCTVDIGSEETLNIVCGASNVCADIYVPVATKGTYLPNIDLKIKPTKLRGVPSNGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L D I + GR + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPTDIDGIHIFRQEGLTLGREVGPILGLDDVILDVTATANRADALSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A GKL ++ + S +I+ + + C + ++ V+ +P W+++R Sbjct: 181 IAALTGGKLSLPQLTGVEITPSTGQKIRVKISEQHACPLYIGTLIENVKIAASPEWLQRR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILAL 290 L A G+R I+ +VDITNYV L+RG P H FD SR+ V + VR A +GE + L Sbjct: 241 LIAAGVRPINNIVDITNYVLLERGQPLHAFDKSRLEQVGGGTDVTIGVRFAQAGETLKTL 300 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D Q +LS N++I ++ + ++AG++GG+ TT + +E AL++ + I RS +++ Sbjct: 301 DGQTRNLSTQNLLITANNQPVALAGVMGGEETEIHPGTTSLFLEAALFNSVAIRRSSRSV 360 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ +++ R+ERGV+ + +SL+ L + + Y+P + + Sbjct: 361 GLRSEASGRYERGVNWAELAIASDRALSLMQELAD---AKVVHQETSDYRPDNALKNHPI 417 Query: 411 VKRLSGIDV---PIE-----------DSLRILERLGFSVIGEYD-KFEVSVPSWR-QDVE 454 + RL I+ PI+ D RIL LG + D ++V VPS+R D+E Sbjct: 418 ILRLERINQVLGPIDLGAETGELKAADVERILTALGCELTDNQDGSWQVKVPSYRYSDLE 477 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + DL+EEI R+YG D + LP + + L L Q R ++ L + + E++++S Sbjct: 478 REIDLIEEIARLYGYDNF-VDTLP--EKTEPGYLPLDQELLRKLRGYLRAEGLTELMHYS 534 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + G R++ + NP+ + S +RT L+ GL+ A N+ + FE+ Sbjct: 535 LVKP-------GEDRQILLNNPLFTEYSALRTDLISGLIDAFEYNLQQGNGALNGFEIGT 587 Query: 575 VYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 ++ + EG + + AGI G + + GR W + +E + F AK +V + Sbjct: 588 IFSREE-EGLEESQVIAGIMGGDTTV---GR-WFNGGKENP--MTWFAAKGILENVFQQL 640 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + E+ HPGR+ + LG FG+ HP + L + + F++ LD Sbjct: 641 GMQVEFQPEN-RDRRLHPGRTASLWLGG-ARLGTFGQVHPQLRREKSLPDAVYVFQLDLD 698 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 ++ + S +P RDLAF + G + +I + L++ V VF Sbjct: 699 TLLSTLDNDELLIPKFKPYSTYPASDRDLAFFASVKVTVGEIEKVITKAGKGLLESVEVF 758 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 D ++G+++ G++S+ +++ + + T D+++ + +I E++V+K LRS Sbjct: 759 DEYRGENVPIGQRSLGFRLVYRAVDHTLTDNEVEPIHHKIRESLVEKFGVTLRS 812 >gi|256379468|ref|YP_003103128.1| phenylalanyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] gi|255923771|gb|ACU39282.1| phenylalanyl-tRNA synthetase, beta subunit [Actinosynnema mirum DSM 43827] Length = 825 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 249/820 (30%), Positives = 398/820 (48%), Gaps = 87/820 (10%) Query: 1 MKFTLSWLKDHLDTD--VSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVERNPD 57 M+ ++WL +HL+ D + +++ + T +G+EVE+ ++ P +V+ +E + Sbjct: 1 MRIPVTWLVEHLEFDQTPTPDQLAEAFTRVGIEVEETTGLGPVTGPLVAGRVVEIEELTE 60 Query: 58 LDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 I R++ G Q +VCGA N G V A PG+ +P + + RK G S Sbjct: 61 FKKPIRFCRVEVGPDQVNGIVCGARNFVEGDTVVVALPGAVLP-GDFRIAARKTYGRTSE 119 Query: 116 GMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CS +EL L D+ A I+ LP A G + L L D +I+V+ TP+R VRG+ Sbjct: 120 GMICSARELGLGDEHAGILVLPSGTAQPGDDAHELLGLGDTVIEVAPTPDRGYAFSVRGL 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A +L A + ++ +E ++ +DD++ C FA V GV P W Sbjct: 180 ARELACAFEAPFGDPGLAEVPEAEGDVWSVR--VDDATACSRFAARRVTGVDPTAPTPWW 237 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 MR+RL G+RSIS VD+TNYV L+ G P H FDAS + L VRRA +GEK+ LD+ Sbjct: 238 MRRRLMLAGIRSISLPVDVTNYVMLELGQPLHAFDASAVKGGLVVRRAAAGEKLTTLDDA 297 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 L PD++VIA D + S+AG++GG D+++D+L+E A+WDP +IAR+ + + Sbjct: 298 VRALDPDDIVIADDSGVLSLAGVMGGASTEVRDSSSDILLEAAVWDPKSIARTVRRHKLP 357 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV-- 411 +++ R+ER VD + PV + +L L G I R P ++ + Sbjct: 358 SEAAKRYERTVD-PALAPVALERAARLLHLFG--EGSIQPGRTDVGTPELPAAVSMPIDL 414 Query: 412 -KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV-----PSWRQDVEEKADLVEEILR 465 R++G+ + R L ++G V D +V P+WR D+ + ADLVEE+LR Sbjct: 415 PDRVAGVPYARGVTARRLGQIGCRVEVSTDDAGHTVVTAVPPTWRADLIQPADLVEEVLR 474 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 + G D I S L V R L+ QQ R R V R LA ++EV + F+S G Sbjct: 475 LEGYDSIPSV---LPPVPAGRGLTEQQRRRRSVSRALAEHGLVEVKPFPFLSPAVFDALG 531 Query: 526 GGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV----- 575 + ++ +LNP+ +D + + T+L+PGLL A RN+ R D A++ V+ V Sbjct: 532 LAEDDVRRTTTTVLNPLESDKNALATTLVPGLLDALQRNLARGQKDVALYAVAQVTLPRA 591 Query: 576 YENDTPE--------------------GQKYMAAGIRKGS---SGIEGSGRL--WSDKSE 610 + PE Q A + G+ G G+GR W+D + Sbjct: 592 QQGAMPEVGVGERPADEQVAALRAALPQQPVHVAAVLCGNRELPGWWGAGRRADWAD-AV 650 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 E R V A V V+ D AP +HPGR ++ + +G+ GE Sbjct: 651 EVARLV------GQAYGVRISAVASDL------AP--WHPGRCAELRVG-DFPVGHAGEL 695 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP +++ GL E+ LD++P+++ + + P L + Sbjct: 696 HPKVVEALGLPKRTVAVELDLDALPLAEHRPAPV--------VSPYPPVLLDVAVVVDAD 747 Query: 731 GTLVNIIKNVD----RLIDDVTVFDVFQGKSLGEGKKSVA 766 + + +D L++D+ +FD ++G+ +GEGK+S+A Sbjct: 748 VPAARVAEALDAGGGELLEDIRLFDDYRGERVGEGKRSLA 787 >gi|315651151|ref|ZP_07904183.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM 3986] gi|315486616|gb|EFU76966.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium saburreum DSM 3986] Length = 806 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 251/849 (29%), Positives = 404/849 (47%), Gaps = 88/849 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ + D +T G +VE + L + ++LS+E++PD Sbjct: 1 MDTALSWIKAYVPDLDVTPSEYTDAMTLTGTKVEGYKELDKNLEKIVVGEILSIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G +++IQ+V GA NV VG L G GS +PEN + + K Sbjct: 61 DKLIICQVDVG-NEKIQIVTGASNVSVGDKVPVVLDGGKVAGGHDGSPLPENGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS EL + I LP D+ V + L L D I + +T Sbjct: 120 LRGVESFGMMCSIDELGQDKNYFPDAPENGIYILPKDSKVVADAIELLGLRDTIFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC GV GIA + A K ++ +SE++ + ++ DS LCK + V Sbjct: 180 SNRVDCYGVIGIAREAAATFKKKFVLPKVNQTGNSENVADYLSVEVRDSELCKRYVARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P WM++RL+AVG+R I+ +VDITNYV + G P H FD + + V RA Sbjct: 240 KNIKLAPSPAWMQERLRAVGIRPINNIVDITNYVMAEYGQPMHAFDYDLLEGHKIVVDRA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE+ LD L D ++I + ++AGI+GG+++ D+ T ++ E A +D Sbjct: 300 KDGEEFETLDGMVRKLDKDILMINDGKKAVAVAGIMGGENSKITDDVTTMVFECATFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 NI S K LG+ TDS +FE+G+D + SL+ L G + + P Sbjct: 360 NIRLSSKRLGLRTDSSGKFEKGLDPNNAYDAMMRACSLVEELGAGE----VVGGYVDVYP 415 Query: 402 RKIV-----FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 K V F + +L G D+ ED L I +R+ E D E+ P++RQD+ Sbjct: 416 VKAVESRVKFEPERINKLLGTDISREDMLEIFDRIELKYDKETD--EIVAPTFRQDIHFM 473 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNWSF 515 ADL EE+ R +G D+I + + NL L+ + R V + L E +N+SF Sbjct: 474 ADLAEEVARFFGYDKIPTTLPKSSAAIGGINLKLEIEELARDVAKFL---GFSEAMNYSF 530 Query: 516 ISKEQSVLF--------GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 E + +F ++ +EI NP+ D MRT + +L + N +R D Sbjct: 531 ---ESAKVFDKLNLSKDSRYRKAIEISNPLGEDFKIMRTQAVNSILNSLSTNYNRRNKDV 587 Query: 568 AIFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--- 623 +FE++++Y + P + +ER +FV F K Sbjct: 588 HLFELANIYIPKELP-----------------------LKELPDERMQFVLGFYGKENFF 624 Query: 624 DALSVIEPFVS----LDSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 D V+E F+ + L ++ S + HPGR I + LGY GE HP + + + Sbjct: 625 DMKGVVEEFLYTIGIVGKLHYDPSCKEEFLHPGRKADIVFDG-VRLGYLGEVHPLVCENY 683 Query: 679 GLSNPICGFEVYLD--SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 L G Y+ +P K ++ + RD++ +V ++I G + +I Sbjct: 684 KL-----GERTYIAVLDLPNIISFVNFDIKYTGIAKYPSISRDVSLVVPKNILVGEIEDI 738 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I KN ++ +FD+++G + G KSVA + + + T D ++ +MD+I+ N + Sbjct: 739 IEKNGGSNLESFKLFDIYEGDQIEAGFKSVAYSLTFRNKERTLLDTEVNEVMDKIL-NKL 797 Query: 796 KKTNAVLRS 804 + N +RS Sbjct: 798 EAKNIKIRS 806 >gi|330467005|ref|YP_004404748.1| phenylalanyl-tRNA synthetase subunit beta [Verrucosispora maris AB-18-032] gi|328809976|gb|AEB44148.1| phenylalanyl-tRNA synthetase subunit beta [Verrucosispora maris AB-18-032] Length = 851 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 235/809 (29%), Positives = 371/809 (45%), Gaps = 98/809 (12%) Query: 67 TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 TG+ QEI VCGA N G V PG +P + RK G S GM+CS KEL L Sbjct: 71 TGEPQEI--VCGARNFAPGDRVVVILPGGVLP-GGFAIGARKTYGRNSHGMICSAKELGL 127 Query: 127 SDDSASIMELP--IDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA--- 181 DD + I+ LP + A G + L D +++V +TP+R + +RG+A +L A Sbjct: 128 GDDHSGILVLPEHVAAKPGDDARPVVGLDDIVVEVEITPDRGYQMSLRGLARELAHALGV 187 Query: 182 GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKA 240 G + + + + P+E++ D C FA V+GV P WM++RL Sbjct: 188 GFQDPGRMPATPGTAQPAYPVEVR----DPVGCDRFAARMVRGVDPTAQTPQWMQRRLTV 243 Query: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 G+RSIS VDITNYV L+ G P H FDA R++ L VRRA GEK+ LD L+P+ Sbjct: 244 AGIRSISLPVDITNYVMLELGQPMHAFDADRLAGPLVVRRAVPGEKLTTLDGVTRALAPE 303 Query: 301 NVVIA-----------SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 ++VI DG S+A ++GG+ + +T +VL E A WDP + R+ + Sbjct: 304 DMVICDAGLSNPVAGDGDGVPISLAAVMGGETSEVLPSTVNVLFEAAHWDPAMVGRTARR 363 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +++ R+ERGVD + L V+L+ GGTA D + + + Sbjct: 364 HKLFSEAAKRWERGVDPALPLVALDRAVALLTEHAGGTAGDEVLDIDHVVARTPVTLPVD 423 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-----------------IGEYDKFEVSVPSWRQD 452 R G++ + +LE++G +V G+ D V+ P+WR D Sbjct: 424 LPSRRVGVEYSPARVVALLEQVGCTVARGTDRLAEDPGEVGVAAGDADVLSVTPPTWRPD 483 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + + ADLVEE++R+ G D++ S L R L+ QQ R R V R LA R +EV+ Sbjct: 484 LTDPADLVEEVVRLDGYDKVPSL---LPTAPPGRGLTWQQRRNRAVSRALAERGYVEVLA 540 Query: 513 WSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 F++ + + F ++ + + NP+S + +RT+LL LL RN+ R + D Sbjct: 541 HPFVATDLADQFALPADDPRRQAVRVANPLSDEEPLLRTTLLGPLLGIVRRNLGRGLRDL 600 Query: 568 AIFEVSHVYENDTPEG-------------------------QKYMAAGIRKG---SSGIE 599 A++E+ V++ G Q A + G +G Sbjct: 601 ALYEIGVVFQPRPGAGSPPAMGVDRRPTDAEFAAADAVVPHQPRHVAVVLTGDIEPAGWW 660 Query: 600 GSGR--LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GR W+D E A D L+ V D + + + +HPGR + Sbjct: 661 GAGRPATWADAVE----------AGRDVLAAAG--VPADRIEVRAAEYAPWHPGRCAQLL 708 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +V G+ GE HP +L L E+ LD++P + +S P Sbjct: 709 VDGTVV-GHAGELHPAVLATLELPRRTSAMELDLDALPAA-----PVLPAPGVSGFPPAL 762 Query: 718 RDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 D+A +VD+ +PA + + + L++ V +FDV+ + LG G+KS+A ++ + Sbjct: 763 IDVALVVDEAVPAQDVQQALTEGAGELLEAVRLFDVYASEQLGAGRKSLAYKLTFRAPDR 822 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T ++ D V ++ A LR + Sbjct: 823 TLTVEEAVAARDAAVARATERVGATLRGA 851 >gi|315656480|ref|ZP_07909369.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315493039|gb|EFU82641.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 872 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 255/891 (28%), Positives = 425/891 (47%), Gaps = 107/891 (12%) Query: 1 MKF-TLSWLK--DHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WL+ + D S ++ L +GLE E + P +V+S+ Sbjct: 1 MAFVSIEWLRRWTAVPADTSASQLAKDLVKVGLEEEAIHTSGVTGPLVCGRVVSMVPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G+ ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGEEFNDAPGTGKEPSDIPSRSIICGAHNFKEGNHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASI-----------MELPIDAPVGGRLSDY 149 + + RK G S GM+CS +EL L DS I ME+P AP G + Sbjct: 120 DFAIATRKTYGHISDGMICSARELGLGQDSNGIIVLEEYLGERGMEVP--AP-GTDMLPI 176 Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS------CPLSSES-IPL 202 L L+ ++++++TP+R C +RG+ + + K + ++ P ++S P+ Sbjct: 177 LGLNQELLEINITPDRGYCFSMRGVGREYSHSTGAKFTDWGLAENLKNGLPAVNDSGFPV 236 Query: 203 EIKFDLDDSSLCKGFAMC------CVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNY 255 EI +D++ +G C V+G+ N A P WM RL++ G+RSIS VD+TNY Sbjct: 237 EI----EDAAPIRGHVGCDRFVARIVRGLNPNAATPQWMVARLESAGMRSISLPVDVTNY 292 Query: 256 VSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRI 310 V LD G P H +D +++ L VRRA GE+ LD+ E L ++++I R+ Sbjct: 293 VMLDLGQPMHAYDLDKVTGPLVVRRARQGEQHTTLDDVERTLDAEDLLITDCQGGHGARV 352 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 IAG++GG +++T+VL+E A +D +++ARS + + +++ RFERG D + + Sbjct: 353 LGIAGVMGGADTEMTESSTNVLLEAAHFDAVSVARSARRHKLPSEASKRFERGSDPE-LP 411 Query: 371 PVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILE 429 PV + +L GG D +A KP+ V + + RL G++ + +L Sbjct: 412 PVAAQYAAELLVEYGGGTIDPGVADVNHVKPQPTVALPFTAATRLIGVEYSPQRVEELLR 471 Query: 430 RLGFSVI-GEYDKFEVSVPSWRQDVE-EKADLVEEILRIYGVDQIKS-EPLPLTQVEDKR 486 +G +V + D F V PSWR D+ A L+EEI R+ G ++I S P+ ++ + Sbjct: 472 AIGCNVTKSDADTFSVVPPSWRPDLAGGPAHLIEEIARLDGYEKIPSVVPVGPAKIGNPA 531 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL---FGGGQRE-LEILNPISADMS 542 L + R V LA + EV+ + F+ E ++ +R+ +++ NP++ D Sbjct: 532 PLRTR----REVSDTLAEAGLTEVMTYPFLGNEHDLMGLPVDDPRRDTVKLANPLADDSP 587 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMA 588 +R+SLL LL RNV R AIFE+ V E + E + + Sbjct: 588 ALRSSLLDTLLDTASRNVSRGNPRVAIFELDQVVSAHGVIPAPIPGVEEKPSDEAMQALR 647 Query: 589 AGIRK---------GSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSL 638 AG+ K + IE S + + + + A + L+V + + Sbjct: 648 AGVPKQPWHVAAVLAGNAIEASPHDAARAWDWADAIELAIRVAVSQGLAVRPEALGVGG- 706 Query: 639 RFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 ++ + +HPGR I+ A VLGY GE HP + FGL C FE+ LD+I Sbjct: 707 --QAAIAAPFHPGRVAQIRVGAFTGGKVLGYAGELHPKVCQNFGLPPRTCAFELDLDAI- 763 Query: 696 ISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVF 753 +K R K ++ +S+ K DLAF+V Q +PA + N I K + L++++ +FDVF Sbjct: 764 --EKSRPKDAFQLCPVSTFPAAKEDLAFVVKQDVPALKVANAIAKAGEGLVEELRLFDVF 821 Query: 754 QG-KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + LGEG+KS+A + ++ T +I+ +RI++ V K A LR Sbjct: 822 ENVEQLGEGRKSLAFALRLRAADRTLSPQEIKETRNRIIKKVEKTCQATLR 872 >gi|188588255|ref|YP_001921622.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum E3 str. Alaska E43] gi|188498536|gb|ACD51672.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum E3 str. Alaska E43] Length = 791 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 237/833 (28%), Positives = 409/833 (49%), Gaps = 73/833 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK SWL+D++D +VS +++ D LT G ++E+ + + + K+ +E++PD D Sbjct: 1 MKVPFSWLQDYVDINVSPKELGDKLTLTGSQLEELIIQGDVIDKVVTGKITEIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDIGT-ETIQIVTAATNMKEQDVVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M LP D +G L + L+L+ I+D +T NR DC+ + G+A Sbjct: 119 CSEEELGIAGDEPVHGLMILPTDTKLGVELKELLKLNKAILDFEITSNRPDCLSIVGMAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + AA K N+ +S ++ E+ ++ D LC + VK V+ +P WM+ Sbjct: 179 ETAAALRTTYKMPNLEYKVSGNGNVESELNVEVKDD-LCLRYMARKVKNVKVKPSPGWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 +RL G+R I +VDITN+V L+ G P H +DA IS + + V RA +GEK LD E Sbjct: 238 ERLLEAGIRPIDNIVDITNFVMLELGQPMHAYDAREISTNKIVVERAKNGEKFTTLDEVE 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L + I D +I +AGI+GG ++ ++TT+V+ E A +D NI + K L + + Sbjct: 298 RELDDSMLCIKDDNKIVGLAGIMGGLNSEIKEDTTEVIFESANFDGTNIRVNSKKLNLRS 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKR 413 ++ RFE+ +D + +LI L G + I N + K++ ++ V + Sbjct: 358 EASGRFEKDIDPNLAKLAIDRACALICELGAGEVIEGTIDIYNKKKEEGKVIVDSNWVNK 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++ E+ + L+ + + D V+ P++R D+ K D+ EEI RI+G D I Sbjct: 418 FLGTNLSKEEMKKCLDSVDLFTEIDGDNLNVTAPTFRIDIAIKEDIAEEIARIHGYDVI- 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--------EVVNWSFIS-------- 517 P + V R +Y KR+L + +M + +++SF+S Sbjct: 477 --PATIFSVATSR-------EPKYRKRLLDDKVVMLATGSGLNQSISYSFVSPKVFDKIN 527 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S L + ++I NP+ D S MRT+ +P +++ GRN R +FE++ +Y Sbjct: 528 VPEDSEL----RNVVKIKNPLGEDYSVMRTTTIPSMMECLGRNYSRNNDYVRLFEMAKIY 583 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 E P + + G ++ D C ++DL K +++E Sbjct: 584 IKNEDETKIPTERNILTIG-------------MYGD-----CDYLDL---KGAVENIVEG 622 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +S YHPG++ + +V G GE H ++ + +G+ P E+ L Sbjct: 623 LGIKNSKYERESENVSYHPGKTAKLVIGKNVV-GTLGEVHLDVTENYGIDVPCFIAELNL 681 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 D++ S K K L V RD+A +V+ I + I+ L++ V +F Sbjct: 682 DALYESADMDRKYK---ALPKFPAVTRDIALLVEDSILVQEIEECIRKAGGNLVEKVQLF 738 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++GK + +GKKS+A + + K T D ++ + D+I+ ++ K A LR Sbjct: 739 DIYKGKQIPDGKKSIAYAIAYRADK-TLTDKEVNKVHDKILRSLEYKLGATLR 790 >gi|86133318|ref|ZP_01051900.1| phenylalanyl-tRNA synthetase beta chain [Polaribacter sp. MED152] gi|85820181|gb|EAQ41328.1| phenylalanyl-tRNA synthetase beta chain [Polaribacter sp. MED152] Length = 808 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 240/830 (28%), Positives = 401/830 (48%), Gaps = 49/830 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WL+ L D K + LT +GLEVE ++ +E+ L I KVL+ +++P Sbjct: 1 MKISYNWLQQFLQIDWDAVKTGELLTDLGLEVEGIETKESIKGSLKGIVIGKVLTCKQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGI 112 + D + +D G +Q+VCGAPNV G A G+ + ++ + + KIRG Sbjct: 61 NADRLKVTTVDLGDGNPVQIVCGAPNVAAGQKVPVATIGTLLYDDKGESFKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L + G +D + +D + ++ LTPNRSD + Sbjct: 121 ESHGMICAEDELGLGSSHDGIMVLDEEIKEGTLGADVFNVETDYVFEIGLTPNRSDAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLD--DSSLCKGFAMCCVKGVRN 227 G+A DL A + + ++ + P S+ E ++FD++ D L + + V Sbjct: 181 YGVARDLKAGLIQQDTKLELISPSVSDFHVDERTLRFDVEVEDKDLVPRYCGITITDVTV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RLKA+GL + +VDITNYV + G P H FDA +I + + V+ G K Sbjct: 241 KDSPEWIQNRLKAIGLTPKNNIVDITNYVLHELGQPLHAFDAQKIKGNKVIVKTLEEGTK 300 Query: 287 ILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 LD E LS D+++I ++ I G+ GG ++G ++T + +E A ++P+++ + Sbjct: 301 FTTLDEVERTLSADDIMICDAEENPLCIGGVFGGLNSGVTEHTNSIFLESAYFNPVSVRK 360 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + K + TD+ +RFERG+D+ LK LI GG ASDI + + ++ Sbjct: 361 TAKRHALNTDASFRFERGIDINITEYALKRAALLIEEYAGGKLASDISDFYPVKLEDFQV 420 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEI 463 RL G ++P E IL L + E + +++PS+R DV+ +AD++EEI Sbjct: 421 FLSYDNAYRLIGQEIPKETIKNILASLEIKINSETEGGLGLTIPSYRTDVQREADIIEEI 480 Query: 464 LRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISK 518 LR+YG + I+ S L + +S ++ ++ V+A + E + S Sbjct: 481 LRVYGYNNIEFSHKLNTS-------ISFDSNKETKIENVVAEQLSALGFNETMANSLTKA 533 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + L E + +LNP+S D+ +R SLL L++ N++R +E Y Sbjct: 534 DYTKLSDNINEEANVAMLNPLSNDLGVLRQSLLFSGLESVSYNLNRKNNALKFYEFGKTY 593 Query: 577 ENDTPEGQ--KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + + Q K++ + +G D D F K SV E + Sbjct: 594 HKYSEKYQENKHLTLFV---------TGNRTKDSWNANVAQSDFFYLKGVLTSVFER-LG 643 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + L+ P+ G+ + +I L FG +IL FG+ + ++ ++I Sbjct: 644 IAKLK---STPTKNDVFSEGLSFSLGKIKLADFGVIKRSILKEFGIKQEVLFADLNWENI 700 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVF 753 Q K+ KV LS VKRDLA +++ + N+ +R L+ +V +FDV+ Sbjct: 701 L--QLASKKSIKVSELSKFPSVKRDLALLLNNKTEFKEVYNLAFQSERKLLKEVDLFDVY 758 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G L EGKKS A+ ++Q T D I +M ++ + K AVLR Sbjct: 759 EGDKLPEGKKSYAVSFVLQDENKTLEDKQIDKIMQKLQASFEKNLEAVLR 808 >gi|254932900|ref|ZP_05266259.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes HPB2262] gi|293584454|gb|EFF96486.1| phenylalanyl-tRNA synthetase [Listeria monocytogenes HPB2262] Length = 802 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 228/827 (27%), Positives = 416/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS E +PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCESHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDETEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD++ T+ +I+ + +L+ D+ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGGKLLVDIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ ++++E + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLHAIIR 802 >gi|317132904|ref|YP_004092218.1| phenylalanyl-tRNA synthetase, beta subunit [Ethanoligenens harbinense YUAN-3] gi|315470883|gb|ADU27487.1| phenylalanyl-tRNA synthetase, beta subunit [Ethanoligenens harbinense YUAN-3] Length = 794 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 246/828 (29%), Positives = 397/828 (47%), Gaps = 60/828 (7%) Query: 1 MKFTLSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPD 57 MK ++ WL +H+D V+ + + +T G +VE + E + + +LS+E++PD Sbjct: 1 MKLSMKWLAEHVDVPEGVTPRQFSEDMTMTGQKVEGYETLGEEIRGVVVASILSIEKHPD 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D I R+D G +Q+V GA NV VG L A G+ +P I N K+RG+ S G Sbjct: 61 SDHLLICRVDAGGPVSVQIVTGAQNVFVGALVPAALDGALLPGGKRI-NSGKLRGVMSDG 119 Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL LS I L D G + + L D +++ +TPNR DC+ Sbjct: 120 MLCSLGELGLSQADFPYAAEDGIFILREDCAPGEDIRKAVGLDDVVVEFEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNV 229 V G+A + AA KL+ +++ ++ +D LC + VK V Sbjct: 180 VIGLARE-AAATYRKLRRVHVPAVRGGAGKTSDLLSAQIDAPELCTRYCARAVKQVCIKP 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P WMR+RL+A G+R I+ +VDITNYV L+ G P H FD I+ + VRRA GE+I Sbjct: 239 SPRWMRERLRAAGVRPINNIVDITNYVMLEYGQPLHAFDVRSIAGGAIRVRRAEEGERIT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E+ L P VIA + ++AG++GG+ +G +T ++ E A++ ++ + K Sbjct: 299 TLDGVEHALDPSICVIADTEKPVAVAGVMGGECSGILPDTHTIVFESAMFSGPDVRLAAK 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 LG+ T++ RFE+G++ L L+ L G D + + + K V ++ Sbjct: 359 KLGLRTEASARFEKGLNAAATPVALARACELVELLDAGVVCDDALDIDRSAKTETTVALD 418 Query: 409 SE-VKRLSGID---VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + G V +ED+L+ RL F+V V VPS+R DVE KAD+ EE+ Sbjct: 419 PNWINAFLGTSLSPVFMEDALK---RLEFTV----RDGVVHVPSFRADVEHKADVAEEVA 471 Query: 465 RIYGVDQIKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RIYG +QI P+ +T + L+ +Q + + V + + + +SF+S L Sbjct: 472 RIYGYNQI---PVTVTLGATTQGGLNAKQRFEKRMGEVARAAGLSGIETYSFLSPRACDL 528 Query: 524 F----GGGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G R + I NP+ + S +RT+LLP +L RN + A++E VY Sbjct: 529 IRLPAGDPMRNSVRISNPLGEETSILRTTLLPSMLDVLARNYAARNLEAALYEAGTVY-- 586 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 PE + + +K G+ G G D F K A+ I +D+ Sbjct: 587 -LPEVGQELPDERQKIEIGLYGEG-------------TDYFTLKG-AVEAILAGAGIDAF 631 Query: 639 RFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 E + P +YHPGR I E L GE HP +L+ + + + + +D + Sbjct: 632 DVERVTDLP-YYHPGRCARILAGGE-ELALLGEVHPQVLENYEIG--VRAYAAEIDFATL 687 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG 755 RT + + L RD+A + D +P TL ++ + ++ + +FDV+QG Sbjct: 688 FAHART-SAEYHPLPKFPATTRDIAVLCDASVPVLTLEKAMRGAAKDKLESIHLFDVYQG 746 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + GKKSVA V ++ T D + + +++ +++ AVLR Sbjct: 747 QQIEAGKKSVAFSVTLRVADHTLTDREADAAVQKML-AALEQAGAVLR 793 >gi|89890287|ref|ZP_01201797.1| phenylalanyl-tRNA synthetase beta chain [Flavobacteria bacterium BBFL7] gi|89517202|gb|EAS19859.1| phenylalanyl-tRNA synthetase beta chain [Flavobacteria bacterium BBFL7] Length = 807 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 244/830 (29%), Positives = 408/830 (49%), Gaps = 50/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +W++ + S+E LTS+GLEVE V+ E+ L + VL ++P Sbjct: 1 MKVSYNWIRQFITVPESIEDHAALLTSLGLEVEGVEKFESVKGGLQGIVVGHVLECVKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-PENNMIVNVRK--IRGI 112 + D + +++ G + +Q+VCGAPNV G A G+ + E+ ++K IRG Sbjct: 61 NADKLKLTKVNIGS-ETVQIVCGAPNVAAGQKVPVATIGTTLYTESGEAWKIKKGKIRGE 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL + IM L + G SD + + +D I++ LTPNRSD + Sbjct: 120 ESHGMICAEDELNIGTSHDGIMVLDENLDPGTLFSDVINIENDYTIEIGLTPNRSDAMSH 179 Query: 172 RGIALDLVAAGL---GKLKEINISCPLSSESI---PLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A DL AGL G L E I+ +SS + + +++ S L + + G+ Sbjct: 180 LGVARDL-RAGLAIDGDLLEF-ITPSVSSFHVDNRSHRVDIEIEKSELAPRYCGVTLTGL 237 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 +P W++ RLKA+G+ + +VDITNYV + G P H FD + I + + V+ +G Sbjct: 238 TIKDSPEWIQNRLKAIGIVPKNNVVDITNYVMHELGQPLHAFDLATIEGNKIVVKTLPAG 297 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 LD E++L ++++I + IAG+ GG ++G T + +E A ++P+++ Sbjct: 298 TTFTTLDEVEHELHEEDLMICDSVKPLCIAGVYGGLNSGVKKGTNSIFLESAYFNPVSVR 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK 403 ++ K G TD+ +RFERG+D LK LIL GG +SDI + ++ Sbjct: 358 KTAKRHGFNTDASFRFERGIDPNITEYALKRAALLILESAGGEISSDITDVYPQKIEDQQ 417 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 + S+V L G ++P E+ IL L +V + +++P++R DV AD++EE Sbjct: 418 VFLPFSKVNSLIGQEIPKEEIKSILRTLDINVNNVTETGLGLTIPAYRNDVTRPADVIEE 477 Query: 463 ILRIYGVDQI-KSEPLPLTQVEDKR--NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 ILR+YG D+I S+ L + + R N LQ V + LA + E++ S S + Sbjct: 478 ILRVYGYDRIGTSDKLNASIAKTSRLDNHKLQD----LVAQQLAGQGFYEMMANSLTSDK 533 Query: 520 QSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---H 574 L + E+ +LNP+S+D+S MR SL+ G L+A N++R + +FE H Sbjct: 534 HHTLTDQISPKNEVRMLNPLSSDLSVMRQSLIYGALEAVSHNINRRQENLRLFEFGNTYH 593 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 Y+ QK+++ + +G + R D F K LS ++ + Sbjct: 594 QYQERQFTEQKHLS---------LITTGAIHEQSWNHPSRKADFFYIKGAVLSALKR-LG 643 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + S+ + + G I ++ + + G I F + + +Y D + Sbjct: 644 ITSINEKPTKMDFLSEG----ISLNSGVKIADLGVVKKKICKSFDIDATVHYANIYWDEV 699 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVF 753 K+ KT V + VKRDLA +V+ L +I ++ +L+ +V +FDV+ Sbjct: 700 LKLVKEERKT--VTTIPKFPAVKRDLALLVNDETSFKELHDIALQTEKKLLKEVQLFDVY 757 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GK+L +GKKS A+ L+Q T D I M +I + + K+ LR Sbjct: 758 EGKNLAKGKKSYALSFLLQDEVKTLTDKQIDKAMQKIQQQLEKQAGVELR 807 >gi|110637538|ref|YP_677745.1| phenylalanyl-tRNA synthetase subunit beta [Cytophaga hutchinsonii ATCC 33406] gi|110280219|gb|ABG58405.1| phenylalanyl-tRNA synthetase beta subunit [Cytophaga hutchinsonii ATCC 33406] Length = 803 Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 228/828 (27%), Positives = 399/828 (48%), Gaps = 51/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M+ + +WLKD++D S ++I LT GLEVEKV+ E+ L+ I KVL+ E++P Sbjct: 1 MRISYNWLKDYIDLTESADEIARLLTHSGLEVEKVEKYESIKGGLAGIVIGKVLTCEQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC---IPENNMIVNVRKIRGI 112 + D +D G + +VCGA NV G V A G+ + ++ + KIRG Sbjct: 61 NADRLRKTTVDVGGETPLNIVCGAQNVAAGQTVVVATIGATMYPLEGDSFPIQKTKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 S GM+C+E+EL + I+ + D G +Y E+ D I ++ LTPNR+D Sbjct: 121 VSEGMLCAEEELGIGKSHDGILVIDADIKPGTSAQEYFEIEVDSIFEIGLTPNRADAASH 180 Query: 172 RGIALDLVAAGLGKLKEI---NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A LK++ N + I +++ +++ C + +KGV+ Sbjct: 181 LGVARDLRALLNRSLKKVDLKNFQPGFKASGITVKV----ENTKACPRYTGLSIKGVKVA 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P W++ RL+++G+ I+ +VD TNYV G P H FD I + + V+ + + Sbjct: 237 ESPAWLKNRLRSIGVNPINNVVDCTNYVMHSLGQPLHAFDQDEIKGNTIFVKNVPANTEF 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD LS ++++I + +AG+ GG +G +NT + +E A ++P + S Sbjct: 297 VTLDGVTRKLSENDLMICNTSEPMCLAGVFGGLDSGVKNNTRHIFLECAYFNPETVRTSS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 G+ TDS +RFERG D L+ ++I + GG +SDI T+ P +I Sbjct: 357 MKHGLKTDSSFRFERGTDPNMPKVALRKAAAMIAEIAGGEISSDIIDTNTETFPPFRIET 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + +L G ++P + L I+ L + D + VP +R DV+ +ADL+EE+LR Sbjct: 417 THQRICKLIGKEIPADRILEIIALLDIKLAFRNGDLLVLDVPPFRVDVQREADLIEEVLR 476 Query: 466 IYGVDQI------KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 IYG D I +S+ L +D ++ + + L ++ E++ S Sbjct: 477 IYGYDNIELSDRLRSDFLSEFPAKDADHIH------HLIDQSLIAKGFQEILTNSLTKGA 530 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + L + + ILN +S +++ MR SL L+ N++R + +FE VY Sbjct: 531 YNELLSKQEDAVPILNKLSEELAFMRPSLAFTGLETVAYNINRRQKNLKLFEWGKVY--- 587 Query: 580 TPEGQKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLD 636 G KY + S I G+ W+ S + VD FD KA + ++E +++ Sbjct: 588 FKRGTKYNE--YNRLSVFITGNQHAESWNTPS----KTVDFFDMKAVVVQILEKLHIAVT 641 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 ++ P + G+I A L FG L + + + D + Sbjct: 642 QVQEIESNPLF----SKGVIYKHAGKELVQFGYISQAALKATDVKQEVLFADFNADLLLE 697 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQG 755 ++K K++ S V+RDL+ ++D + + + +K +++ D+ VFDV+ G Sbjct: 698 LYSNKSKYKEI---SKFPEVRRDLSLVLDASVTFEQIKELALKTERKILTDINVFDVYAG 754 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 K + EGKKS ++ + + T D I M+++++++ K+ N ++R Sbjct: 755 KQIAEGKKSYSLSFTLLDNEQTLTDQVIEATMNKLMQSIEKEFNTIIR 802 >gi|291536122|emb|CBL09234.1| phenylalanyl-tRNA synthetase beta subunit [Roseburia intestinalis M50/1] Length = 805 Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 255/850 (30%), Positives = 395/850 (46%), Gaps = 93/850 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L W+KD + D + ++ D +T G +VE +N E L I +V S+E++PD Sbjct: 1 MNTSLKWIKDLVPGLDCTPQEYMDAMTLSGSKVEGYENMDEDLDKIVIGQVKSIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPG--SCIPENNMIVNVRKI 109 D I ++D G + IQ+V GAPNV G L G G E + + K+ Sbjct: 61 DKLVICQVDIGT-ETIQIVTGAPNVTEGCKVPVVLDGGKVAGGHDGSKTEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL + D + LP DAPVG YL L D +++ +T Sbjct: 120 RGVESNGMMCSIEELGSNRDMFPLAPENGLYILPEDAPVGESAISYLGLDDTVVEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC + GIA + A + ++ ++E + IK + D LC + VK Sbjct: 180 NRVDCFSILGIAREAAATFGKEFVPPVVTETGNNEDVNDYIKVSVKDDKLCSRYTARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 +R +P WM+ RL+A G+R I+ +VDITNYV + G P H +D I D + VRRA Sbjct: 240 NIRIAPSPEWMQCRLRAQGIRPINNIVDITNYVMEEYGQPMHAYDLDTIEDREIVVRRAA 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE+ + LD QE L D+V++ DG+ IAGI+GG+++ DN +L E A +D Sbjct: 300 KGEQFVTLDGQERTLD-DSVLMICDGKKAIGIAGIMGGENSMITDNVKTMLFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK- 400 NI SG+ +G+ TD+ +FE+G+D I + LI L G + K Sbjct: 359 NIRLSGRKIGLRTDASAKFEKGLDPNTAIEAMNRACQLIEELGAGEVVGGVVDVYPNVKG 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++I F + +L G D+ E L ++ YD EV VPSWRQD+E AD Sbjct: 419 DKRIPFEPEKYNKLLGTDIAKETMLAYFSKIDLG----YDPASNEVIVPSWRQDLECDAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS 517 L EE+ R +G D+I P L E + R V R +A + + +SF S Sbjct: 475 LAEEVARFFGYDKI---PTTLPSGEATTGKLTFKLRIEAVAREIAEFCGFSQGMTYSFES 531 Query: 518 ---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + S L ++ + I NP+ D S MRT L G+L + N +R + Sbjct: 532 PKVYDKLLLPQDSPL----RKAVVISNPLGEDFSIMRTISLNGMLTSLSTNFNRRNKNVR 587 Query: 569 IFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E+ ++Y P ++ EER +F D F Sbjct: 588 LYELGNIYLPKQVP-----------------------VTELPEERMQFTLGMYGEGDFFT 624 Query: 621 AKADALSVIEPFVSLDSLRF------ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 K VIE F+ ++ E+G P + HPGR + V+GY GE HP + Sbjct: 625 MKG----VIEEFLYKAGMKLKPEYDPEAGKP-FLHPGRQANVVYDG-TVIGYLGEVHPTV 678 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + + + + LD +P + + K ++ RD++ +V + + AG + Sbjct: 679 AANYAIKERV--YVAVLD-MPEIVSRASFDHKYEGIAKFPAAARDISMVVPKKVLAGDIE 735 Query: 735 NII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I + + ++ +FD+++G + G KS+A + + D DI MDRIV N Sbjct: 736 KIFDEKGGQFLEKYDLFDIYEGAQIKPGYKSIAYSLSFRAKDRNLEDADITGAMDRIV-N 794 Query: 794 VVKKTNAVLR 803 +++ A LR Sbjct: 795 ALERVGAELR 804 >gi|302875030|ref|YP_003843663.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium cellulovorans 743B] gi|307690351|ref|ZP_07632797.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium cellulovorans 743B] gi|302577887|gb|ADL51899.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium cellulovorans 743B] Length = 792 Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 247/823 (30%), Positives = 412/823 (50%), Gaps = 51/823 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D D+S +++ D LT G ++E V+ + + + K++ +E +PD + Sbjct: 1 MLVPVKWLKDYVDFDISPKELGDRLTLSGSKLETVEVSGDEIKNVVTGKLIKIEAHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D + IQ+V A N++ + A GS + + I K+RGI S GM Sbjct: 61 KLSVCQVDINAEEPIQIVTAATNMKEQDIVPVALHGSVLAGGHKIKK-GKLRGILSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL L+++ +M LP P+G + L + ++D +T NR DC+ + G+A Sbjct: 120 CSEEELGLAEEGTCHGLMILPESTPIGEDIKTVLSMGKAVLDFEITSNRPDCLSILGMAR 179 Query: 177 DLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A K K N + +S E+I +K + D LC+ + VK V+ +P WM+ Sbjct: 180 ETAATINTKYKMPNFTYKTTSAENITDLLKVTIQDP-LCRRYISKGVKNVKIQPSPAWMQ 238 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL+ G+R I+ +VDITN+V L+ G P H FDA I + + V RA + EK LD E Sbjct: 239 ERLEEAGVRPINNIVDITNFVMLELGQPMHAFDARDIRGNSIIVDRASNDEKFSTLDEIE 298 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ D + I ++AGI+GG ++ D+TT V E A +D NI S KNLG+ T Sbjct: 299 RTLTSDILTIRDGEGAIALAGIMGGLNSEIKDDTTTVFFESANFDGKNIRVSSKNLGLRT 358 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD--ICIARNITYKPRKIVFMNSEVK 412 +S RFE+ +D + ++LI L G + I + N KP I + V Sbjct: 359 ESSSRFEKDLDPNLPELAMNRALNLIEELGAGEIMEGIIDLYEN-PVKPHIIEIDSQWVN 417 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G+++ E+ L+RL S + +V+VP++R D+ K D+ EEI+RIYG + + Sbjct: 418 KFLGLNITKEEMKSCLDRLDLSTEIVDNTLKVTVPTFRIDLNIKEDIAEEIVRIYGYNNV 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF----------ISKEQSV 522 S +P V ++ +++Q + L + E +++SF I+K+ S+ Sbjct: 478 VS-TVPKV-VSERSGKTVKQITDDLITDTLLGSGLYESISYSFFGEKDFDKVNIAKDSSL 535 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 + + I NP+ D MRT+ LP ++ RN R + +FE+ VY E Sbjct: 536 -----RNAVTIKNPLGEDYKLMRTTSLPSMMGNLARNYSRNNEEARLFEIGKVYIKS--E 588 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 + +R + G+ G+ VD D K +V+E + S E Sbjct: 589 DPYELPTEVRTLTIGLYGN--------------VDYLDLKGVVENVLETLGIKKVSYERE 634 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + P+ +HPG++ + E G FGE HP + + + + E+YLD + K Sbjct: 635 TENPT-FHPGKTAKLMVGREFA-GVFGEVHPMVNENWKVDERCYIAELYLD---VLYKNA 689 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGE 760 + KK L V RDLA +VD++I + IIK +I++V +FDV++GK + E Sbjct: 690 SDEKKYKPLPKYPAVTRDLAILVDENILVQEIDEIIKKQGANMIEEVKLFDVYKGKQIPE 749 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKSVA ++ + T D+++ +I++ + K A LR Sbjct: 750 GKKSVAYSLVYRLANKTLTDEEVNKTHQKILKTLEHKLGAELR 792 >gi|332638061|ref|ZP_08416924.1| phenylalanyl-tRNA synthetase subunit beta [Weissella cibaria KACC 11862] Length = 807 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 239/833 (28%), Positives = 410/833 (49%), Gaps = 56/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK +++WL+D+L ++ ++ + ++ +E+E +A + I KVLSVE +PD D Sbjct: 1 MKVSVNWLRDYLPIELPANELAEKISRTTVEIEGQYQPQANMKNIVIAKVLSVEEHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + IQ+V GAPNV G + A S + + K+RG+ S GM+ Sbjct: 61 HMVITQVDAGEDEPIQIVTGAPNVAEGQTVILAKHNSIV-GGGQKIKKGKLRGVVSNGML 119 Query: 119 CSEKELMLSDDSASIMEL-----------PIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 + +EL DD S + D G L + D +++ +TPNR+D Sbjct: 120 AALQELGF-DDKVSPKDFEDGIWVFNDVDAADLTPGENALHVLGMDDDVLETGITPNRAD 178 Query: 168 CIGVRGIALDLVAAGLGK--------LKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFA 218 + G A + VAA L + L E + + L S + P E L + Sbjct: 179 LFSMNGTAWE-VAAILSEEPTLPTFELTETSEKTADLISATAPAE---------LAPKYG 228 Query: 219 MCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLT 277 + VK V +P W+++RL +G+R IS +VD+TN + L G P H FD + S +T Sbjct: 229 LRVVKNVEVKDSPLWLQRRLWTMGIRPISNVVDVTNLMLLTYGQPLHAFDLDTLPSKDIT 288 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 VR A EKI LD E + S +++VIA+ AG++GG+ TT++++E A+ Sbjct: 289 VRTAKPAEKIKTLDGVEREASAEDIVIAAGDEALMFAGVMGGESTEVTAKTTNIVLEGAI 348 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARN 396 ++P I + ++ + +++ RFERGV+++ L H +LI + GG ++ +A++ Sbjct: 349 FEPKAIRHAARDQNLHSEASTRFERGVNVEDTFTALDHAAALIAEIAGGEVTEGRVVAQD 408 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 Y+ + + V + G ++ + I +RL F +F V+VP+ R D+ Sbjct: 409 FDYEAPVVKVTTAHVNHVLGTEITEAEISAIFDRLFFDYELNDGEFTVTVPARRWDITIA 468 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADLVEEI R+YG D + + LP + + L+ +Q+ R + L + + +++ Sbjct: 469 ADLVEEIARLYGYDNLPAT-LPTGETTPGK-LTPKQALIRATRHDLEGLGLNQAISYVLT 526 Query: 517 SKEQSVLF--GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + E++ F GQ +++ P+S D R SLL GLL NV R AD A++E Sbjct: 527 TPEKANNFKLHDGQ-PIQLDYPMSQDRQQTRGSLLTGLLDDVAYNVARKQADVALYEQGR 585 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 V+ ++ + I + I G+ R W+ +++ D F K ++ + Sbjct: 586 VFVSNG--DASVLPTEIEHVAGVITGNVLPRTWAAGAQK----ADFFALKGIVERLLANY 639 Query: 633 VSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 D +RF + + HPGR+ I E ++G+ G+ HP + + N FE+ + Sbjct: 640 AFADDIRFVPTTERAEMHPGRTADIYV-GETLIGFVGQVHPVTAKTYKV-NETYAFELNV 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVF 750 D+I K +VV S V RDLA +VD+ +PA L I+ L+ DV +F Sbjct: 698 DAI-FDLPKVKDGYEVV--SRFPAVARDLAILVDRDVPAADLRAAIVAAGGALLHDVELF 754 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV+ G+++ + KKS+A + ++ T D+DI ++RI + +K NA +R Sbjct: 755 DVYTGENVADDKKSLAYALTFVDVEKTLVDEDINAAVERITAALAEKFNAEIR 807 >gi|329667739|gb|AEB93687.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii DPC 6026] Length = 804 Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 230/809 (28%), Positives = 398/809 (49%), Gaps = 37/809 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D + + + +T G+E+ VD+ E L + +L E Sbjct: 1 MLVSYNWLKDFLDLDEDPKDLGEKITRTGVEIASVDHPAEGLKKIVVGHILECEDIEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +++ G+ + IQ+VCGAPNV G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHKCQVNVGEEEPIQIVCGAPNVAAGEDVIVALHGARIAGNEKI-KRGKIRGIKSNGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + I P DA V G + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFEDKVVPAKYADGIFVFPKDADVKPGEEVYKALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G A ++ A K K + E+ +D+ L F + + V+ +P Sbjct: 180 EGAAYEVGAIVDEKPKVEPVVLKEDGPDWTNELDVQVDEK-LAPKFYLRKISNVKIGESP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 WM++RL G+R I+ +VD+TNYV L G P H +DA D L VR+A EK+ L Sbjct: 239 LWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPMHAYDARTFKDGKLEVRKANKNEKLTLL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +++E +L P++++I + +AG++GGK++ +D+TTDV++E A++D ++ +S Sbjct: 299 NDKEVELDPNDIIITDGQKPVMMAGVMGGKNSEVEDDTTDVILESAVFDGTSVRKSALRH 358 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNS 409 T++ RFE+GV+ L L+ + GT ++ I A + P + S Sbjct: 359 ANRTEASSRFEKGVNWDNTQKALDMAALLLRNDADGTVNEGEIKATDAQRNPSVVKTTVS 418 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G ++ + +I ++LGF+V G D+ V+VP+ R D+ ADLVEE+ RIYG Sbjct: 419 YINKVLGTELSRAEMEKIFDQLGFTVAGSEDELVVTVPNRRWDISIPADLVEEVGRIYGY 478 Query: 470 DQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D +KS +PL E S +++ R +K + + +ME +++S S E+++ F Sbjct: 479 DNLKSTQPL---LAETHGGYSAKETAMRRIKDIAQGQGLMEAISYSLTSPEKAISFTKDP 535 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQK 585 + +E+ P+++ S MR +L+ GL+ A N+ R + A+FE VY EN+T + Sbjct: 536 KPVVEVQWPLNSSRSTMRENLITGLVDAASYNMARKQKELALFEQGRVYDHENNTFNEHE 595 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 ++AA SG + + + +D + K ++ + + + + + Sbjct: 596 HLAALY---------SGHTLAANWQHLDQKIDFYFVKGQLTNLFRAIGIKDEDVEYRAEL 646 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNI--LDFFGLSNPICGFEVYLDSIPISQKKRT 702 HP R+ I + + V G G + LD + I +E+ LD+I K Sbjct: 647 IQGMHPTRTAGIYINNQYV-GLIGMLAHAVTTLDKALRGSEIYVYEIDLDAIVSMLHKGM 705 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEG 761 K K + ++RDL+ +V + + IK N + + D+ V DV+ G + G Sbjct: 706 KAKAAPKFPA---IERDLSLLVPNDVTNAQIEAQIKLNGGKYLYDIRVIDVYAGSQIESG 762 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 KS++ + KDT D+ + M++I Sbjct: 763 HKSISYSLTFLNEKDTLTDEVVATAMEKI 791 >gi|311748299|ref|ZP_07722084.1| phenylalanyl-tRNA synthetase, beta subunit [Algoriphagus sp. PR1] gi|126576796|gb|EAZ81044.1| phenylalanyl-tRNA synthetase, beta subunit [Algoriphagus sp. PR1] Length = 804 Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 245/829 (29%), Positives = 402/829 (48%), Gaps = 50/829 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 MK +++ LK+HL S E+I D LT GLEVE ++ E AL + +VL+ E++P Sbjct: 1 MKISINRLKNHLTLTESSEEIADLLTQSGLEVEGLEPFESIKGALEGVVVGEVLTCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D I +D G +VCGAPNV G + A G+ I ++ + + KIRG Sbjct: 61 NADKLKITTVDVGAESPANIVCGAPNVAQGQKVLVAKVGTTIYPSSGDPLTLKKAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 S GM+C+E EL L A I+ L D P G +D +E+S D I+++ LTPNR+D Sbjct: 121 VSEGMICAEDELGLGSSHAGILVLDTDLPNGSPATDIVEVSKDEILEIGLTPNRADGASH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A DL A LG+ ++ + L E+ I ++++++ C +A + G++ +P Sbjct: 181 LGVARDLKAL-LGREIQMPEAVELKVEAEGPAISVEVENAADCPRYAGVVLTGLKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++ LK++ L I+ +VDITN++ D G P H FDA +IS+ + V + K L Sbjct: 240 QWLQNFLKSLDLDPINNVVDITNFILHDLGQPLHAFDADKISEGKIIVGKLPKDTKFTTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E LS + ++I IAG+ GG+ +G D+TT + +E A + P I + + Sbjct: 300 DEKERKLSGEELMIKDPKGGLCIAGVFGGEDSGVSDDTTSIFLESAYFSPDIIRKGSQFH 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 G+ TD+ +RFERG D + LK V LI + GG S I ++ P + + E Sbjct: 360 GLKTDASFRFERGTDPNMPVYALKQAVKLIQEIAGGKVSSEII--DLYPNPIEDFVIEVE 417 Query: 411 ---VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRI 466 V RL G + + ILE L V E + F +R DV +AD++EE+LRI Sbjct: 418 YGHVNRLIGKTIEPSEVKSILESLEIRVENETETGFTAIAKPYRVDVTREADIIEEVLRI 477 Query: 467 YGVDQI------KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 +G Q+ K++ L V+D L + + +L+++ E++ S Sbjct: 478 HGFHQVLLSENLKTDFLAEHPVKDLNKLQYRMT------EILSAQGYHEIITNSLTKPGY 531 Query: 521 SVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + G + +EI N +S D+ MR +LL L+ RN++R D FE VY+ Sbjct: 532 AEKSGYLDASKSVEIYNKLSEDLGVMRQTLLFSGLEVLARNINRRQTDLKTFEFGTVYQK 591 Query: 579 DTPEGQKYMAAGIRKGSS-GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLD 636 G ++G GI SG S+ E R D A ++E +S+ Sbjct: 592 S--------EEGYQEGRRLGIFLSGNKSSESWLEPARAFAFADLYATVEKLLEKLNISIG 643 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + AP Y G+ + +G G +L + + E+ D + Sbjct: 644 DISMVESAPFDY-----GLKLMLGQKEIGSIGLVEEKLLKLAEVRQEVFFAELDWDLLC- 697 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQG 755 KK + KK +S V+RDL+ ++D+ + + ++ IK +L+ + VFDV+QG Sbjct: 698 --KKASGLKKYQDISKFPEVRRDLSLVIDKSVSFDQVKSVGIKFGGKLLQRIGVFDVYQG 755 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + GKK+ A+ +Q + T D I M ++++ K+ A++R+ Sbjct: 756 DKIDAGKKAYALSFHLQDQEKTLTDKVIDKTMSKLIQAFEKEVGALIRT 804 >gi|75908438|ref|YP_322734.1| phenylalanyl-tRNA synthetase subunit beta [Anabaena variabilis ATCC 29413] gi|91208228|sp|Q3MAZ7|SYFB_ANAVT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|75702163|gb|ABA21839.1| phenylalanyl-tRNA synthetase beta subunit [Anabaena variabilis ATCC 29413] Length = 810 Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 235/831 (28%), Positives = 421/831 (50%), Gaps = 48/831 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ ++ +S E++ LT G EVE +++R + +V +VL + +P+ D Sbjct: 1 MRISLNWLRELVEIKLSPEELAHILTMAGFEVEDIEDRRTWANGVVVGRVLERQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNVR + A G+ +P ++ + K+RG+ S GM+ Sbjct: 61 KLSVCQVDVGATETLNIVCGAPNVRADIYVPVATVGAYLPNIDLKIKPAKLRGVPSQGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS KEL L + I P + P+G + L L D I+DV+ T NR+D + + GIA + Sbjct: 121 CSLKELGLPSEVDGIYIFPQENLPLGSDVRPLLGLDDVILDVTATANRADALSMVGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A KL SES+ ++ + D+ C + ++ V+ +P W++QR Sbjct: 181 VAALTDAKLSIPKPGEAFVSESVG-KLGLKIADTQACPAYIGTVIEQVKIASSPEWLQQR 239 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEKILAL 290 L++ G+R IS +VDITNYV L+ G P H FD R+ V + VR A GE + L Sbjct: 240 LRSAGVRPISNVVDITNYVLLEWGQPLHAFDQERLKSVANADNLTIGVRCANQGETLKTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D Q +L+ N++I ++ + ++AG++GG+ + T +++E AL+D + I RS +++ Sbjct: 300 DGQTRNLTTQNLLITANDQPVALAGVMGGEETEVHEGTQSLILEAALFDSVAIRRSSRSV 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIAR-NITYKPRKIVFM 407 G+ +++ R+ERGV+ + + +SLI L G +I R + T R I Sbjct: 360 GLRSEASGRYERGVNRAELEIANRRALSLISELADGVIVHQEIADTRPDPTTWSRSIFLR 419 Query: 408 NSEVKRLSGI-------DVPIEDSLRILERLG--FSVIGEYDKFEVSVPSWR-QDVEEKA 457 V + G ++ +D R L LG + GE + VSVP +R +D+E + Sbjct: 420 LDRVNEVLGPINVGETGELEAKDVERTLTALGCELTPAGE-GTWNVSVPPYRYRDLEREI 478 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DL+EE+ R+YG D + LP + L + Q R ++ L + + E++++S + Sbjct: 479 DLIEEVARLYGYDNF-CDTLP--DKAEAGYLPVDQELVRKLRAALRAEGLTELIHYSLVK 535 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 G R++ + NP+ + S +RT LL GL+ A N+++ FE+ ++ Sbjct: 536 P-------GEDRQIVLSNPLFVEYSALRTDLLAGLIDAFQYNLEQGNGSLNGFEIGRIFW 588 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 E D + +K AGI G + + G+ WS S+++ + F+AK SV + L Sbjct: 589 QEEDGLQ-EKDAIAGIIGGDTSL---GK-WSKGSKDQP--LTWFEAKGILESVFQQLGIL 641 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 + + HPGR+ + LG FG+ HP + L + F++ LD + Sbjct: 642 VEYQPDC-RDERLHPGRTASLWIGGN-RLGIFGQLHPQLRRDKDLPESVYVFQLDLDVLL 699 Query: 696 ISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVF 753 + K S +P RD+AF I + I + L++ V +FD + Sbjct: 700 DALDKDEILVPAFKPYSTYPASDRDIAFFAPVKISVSEIEKAINKAGKGLLESVELFDEY 759 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G+++ +G++S+A +++ + T D ++ + +++ E +V+K LRS Sbjct: 760 RGENVPQGQRSLAFRLVYRASDRTLTDTEVEPVHNKVREALVEKFGVNLRS 810 >gi|298245901|ref|ZP_06969707.1| phenylalanyl-tRNA synthetase, beta subunit [Ktedonobacter racemifer DSM 44963] gi|297553382|gb|EFH87247.1| phenylalanyl-tRNA synthetase, beta subunit [Ktedonobacter racemifer DSM 44963] Length = 846 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 241/864 (27%), Positives = 407/864 (47%), Gaps = 78/864 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPDL 58 M+ LSWLKD++D +S E++ TLT GLEVE +D +E +++ +E+ Sbjct: 1 MRVPLSWLKDYVDITMSPEELAHTLTMAGLEVETIDYIGKEWGDKIITAQIIHLEKVETS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D R++TG QE+ V+CGAPN+++G A G+ + ++ + K G S GM Sbjct: 61 DHLNYTRVNTGT-QELNVICGAPNIKLGDKVPLALAGAQV--GDLEIRETKKMGYVSQGM 117 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS +EL + +D I L D P+G +LSD L + +++ S+ +R D + GIA + Sbjct: 118 LCSPRELGMGNDHNGIYILDEDTPLGLKLSDLL--GEVVLEFSIKAHRGDLSSIIGIARE 175 Query: 178 LVAAGLGKLKEINISCP-LSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 + A L+ + P + + P ++ ++D C ++ + V+ +P+WM Sbjct: 176 VAALTNQPLR---MPQPHFAEQGTPASDLVRITVEDEKRCPRYSARIISNVKLGPSPSWM 232 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQ 293 +RL A G+R IS +VDITNYV L+ G P H FD + + + VRRA GEK+ LD+ Sbjct: 233 GRRLLAAGMRPISNVVDITNYVMLELGQPLHAFDYDLVPEHHIIVRRAQEGEKLKTLDDV 292 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E L+ + ++I +IAG++GG + +D T +L+E A + ++ R+ LG+ Sbjct: 293 ERKLTSEMLLITDPQGPTAIAGVMGGAKSEVNDATQTILLESANFLGSSVRRTSTKLGLR 352 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFMNSEVK 412 TD+ RFE+G+D L++ L T + I + +PR + F ++++ Sbjct: 353 TDASSRFEKGIDPSLTTLGANRACQLLVELASATINPGIADQYPVPVEPRTLRFSLADIE 412 Query: 413 RLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L+ + V + L LGF V + D VSVP+ R D+EE ADLVEE++R+ G + Sbjct: 413 WLTSMKVTHSEVETTLSALGFGVQFDEQGDGMRVSVPTHRNDIEESADLVEEVIRLIGYN 472 Query: 471 QIKSE----PLP-------LTQVEDKRNLSLQQSRTRYVKRVLASRAMM---------EV 510 +I S PLP + ++ R L + + + L SRA M E Sbjct: 473 KIPSTIPIGPLPERLEDTWFAREQELRTLLVNANLNETITYSLTSRARMAKLLSNADEES 532 Query: 511 VNWSFISK-------EQSVLFGGGQRELEILNP-----------ISADMSNMRTSLLPGL 552 V + + EQ+ + G + + +P +S+DM MR +L+ L Sbjct: 533 VRYLLQAPRATNGAGEQAPVKSNGTQAVATFDPHSIPAVVLANSLSSDMECMRLTLMSSL 592 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 L+ N R A FE+ Y P R+ + GI SG E Sbjct: 593 LETVQENSKRNKAGLRFFEIGRRY---LPGASASQQPDERR-AVGIALSGPAEITWIPEL 648 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV--------- 663 R D +D K + + + + RF +HPGR +++ + Sbjct: 649 ARPADFYDLKG-TIETLLAGLKIGRYRFTPTQHPTFHPGRCALLELPRQTADGRTEVFSP 707 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLA 721 +G GE HP + + L YL I + Q ++ + +S + RDLA Sbjct: 708 VGVLGEVHPLVQQHYDLPQ-----RAYLCEIDLEQLYNAVPARITYAPISRHQELTRDLA 762 Query: 722 FIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 IVD+ +PA + + I+ + L+ VT+FD++ G + GKK++ ++ Q + T +D Sbjct: 763 LIVDEQVPAQHMQDAIQRLGGELLRAVTLFDLYTGDPIPAGKKNLTYTLVYQSQERTLKD 822 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 + +RI+ + ++ A LR Sbjct: 823 TEANEAQERIIRGLHEEFGADLRQ 846 >gi|225022600|ref|ZP_03711792.1| hypothetical protein CORMATOL_02642 [Corynebacterium matruchotii ATCC 33806] gi|224944508|gb|EEG25717.1| hypothetical protein CORMATOL_02642 [Corynebacterium matruchotii ATCC 33806] Length = 822 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 239/830 (28%), Positives = 386/830 (46%), Gaps = 72/830 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE---- 53 M T SW++ L T V+ ++ +G E E ++ E P + +V+++E Sbjct: 1 MLITQSWVQSLLPGFTGVTPAELDAMYVQVGFETEGYESIPETTGPLVLGRVVAIEELTE 60 Query: 54 -RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + P C +L G Q ++CGA N VG + V A PG+ +P ++ R+ G Sbjct: 61 FKKPIRYCQVL---VGPDQVQNIICGAQNFSVGDIVVVALPGTVLP-GGFEISARQTYGH 116 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CS EL L+ S+ I+ L P G + L L D + DV++TP+R + R Sbjct: 117 VSEGMICSAAELGLTTRSSGILTLDSGEP-GADAREVLGLDDTVFDVNITPDRGYALSAR 175 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGV-RN 227 G++ +L A+G G +P I DL + K F + V G+ Sbjct: 176 GLSREL-ASGFGLSAVYQDPALAEFPQVPRPTSKLIGVDLRPETKAKRFGLRRVSGIDPK 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 P W+++ L G + ++ D+TNYV L G P H FDA +IS L VR A GE++ Sbjct: 235 ATTPWWLQRELLLSGQQPVNPATDVTNYVMLALGQPMHAFDAEKISGDLVVRLARQGEQL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ L P++VVI D IQS+A ++GG + +TTDV E A WDPI ARS Sbjct: 295 ETLDHVVRKLDPEDVVICDDAGIQSLAAVMGGVSSEISADTTDVYFEAATWDPIVTARSS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + + +++ RFERGVD + L +L+ + GGT ++ + + P I Sbjct: 355 RRHKLSSEASRRFERGVDPALVEVALDMACALLQDIAGGTISTGRTVVGEVPVMP-TIRM 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S +++G+D E + L +G V +V P+WR D+ E ADLVEE+LR+ Sbjct: 414 AVSRPGQIAGVDYAPETVVGRLREVGCKVTEHDGMLDVVPPTWRPDLTEDADLVEEVLRL 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G+ I P + V + L+ Q R R + LA +E++ FI ++ +G Sbjct: 474 EGLADI---PAIVPTVSAGKGLTPAQKRRRAIGHALAYGGYVEILPTPFIRQDTFDTWGL 530 Query: 527 G-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + + NP+ AD + + T+LLP +L+A RNV R + + ++F V Sbjct: 531 AAADERRNAVAVRNPLDADYAIVGTTLLPSMLEAVARNVARGMTNLSLFGQQQVSVVQGA 590 Query: 582 EGQKYMAAGIRK----------------------GSSGIEGSGRLWSDKSEERCRFVDLF 619 ++ R G+ IE SG W + E + D Sbjct: 591 GMSPMLSVAQRPSDAEIAGLLATLPYQPLHVATVGTGLIEFSGP-WGEGRE--YSYADAI 647 Query: 620 DAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 ++ A A V SL E+ +HPGR + +V+G+ GE HP +++ Sbjct: 648 ESAKLVARAAGV--------SLTVENAEYLPWHPGRCAALLVDG-VVVGHAGELHPQVVE 698 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VN 735 GL C E+ + ++P++Q LS+ VK+DLA +V + +PA T+ Sbjct: 699 RLGLPKRTCAMELNVSALPLTQVLPAPV-----LSAFPAVKQDLALVVPEDVPAETVRQT 753 Query: 736 IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 II L++ V +FDV++ LG KS+A ++ + T D++ + Sbjct: 754 IIAGGGDLLETVELFDVYRSAGLGADVKSLAFALVFRAPDRTLTDEECSV 803 >gi|160901698|ref|YP_001567279.1| phenylalanyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] gi|160359342|gb|ABX30956.1| phenylalanyl-tRNA synthetase, beta subunit [Petrotoga mobilis SJ95] Length = 810 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 238/837 (28%), Positives = 419/837 (50%), Gaps = 74/837 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICD--TLTSIGLE-VEKVDNREALSPFTIVKVLSVE--RN 55 MK +L+WL+D++ ++E++ L S+ +E EK N L+ T+ +++ + N Sbjct: 1 MKVSLNWLEDYIKVTKNIEELVKEIKLHSVDVEGFEKAGNN--LNNITVGEIMEITPLEN 58 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D + + +ID GK + +V G V++G A PG+ + NN+ + R+ +G+ S Sbjct: 59 AD-NLVVCKIDVGKDIK-NIVTGDLTVKIGEKVPVALPGATLA-NNIKIEEREFKGVISE 115 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GMMCS KEL +S D+ I + D P G + +L D I+++ + PNR D + G+A Sbjct: 116 GMMCSLKELGISGDADKIYRIVDDVPNGMDFVKFFDLYDQILELDILPNRPDLLSYLGVA 175 Query: 176 LDL----VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +L G I IS E P+ I+++ C + VK ++ +P Sbjct: 176 KELETIDCGVGFNLPDYIKIS---KGEGFPVRIEYEK-----CNRYMATVVKDIKVGPSP 227 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 W+ +RL G+RSI+ +VDITNYV L+ G+P H FD I D + VR+A GEKIL LD Sbjct: 228 MWLVKRLGRSGIRSINNIVDITNYVMLETGHPIHAFDLDLIGDQIVVRKAKKGEKILLLD 287 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +EY + + +I I ++ GI+GG+ +G ++NT D+L+EVA +DP+NI +S Sbjct: 288 GKEYTMEGEETLITDGDNIIALGGIMGGELSGINENTKDILLEVAHFDPVNIRKSSTYHK 347 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP---RKIVFMN 408 I +DS YRFERGVD V+ ++ LI L GG +I KP +KI Sbjct: 348 ITSDSSYRFERGVDPNDSEMVMGRLIKLINELAGGKVE--GATTDIYPKPIENKKISIKK 405 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFS---------------VIGEYD--------KFEVS 445 S + G D+ ++ +IL++L FS V+ D ++ VS Sbjct: 406 SFINDRLGKDLAEKEIEQILKKLDFSFTIVEKSSQQKAMEDVVKMIDLPWDIIDEEWNVS 465 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRN--LSLQQSRTRYVKRVLA 503 +P+ R D+ + DLVEE+ R+YG +I+ L + + +S ++ V+ + Sbjct: 466 IPTKRPDITQDIDLVEEVGRVYGYSKIQPAFPNLNGLIGSKGDFVSFKEK----VEDTML 521 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + E +F + ++ + EL ++NPIS+++ M + L+ GLL + N Sbjct: 522 ANGYHEA--KTFPLNNGNRMWMENELELRLINPISSELEYMSSKLIYGLLDSVSFNYRNQ 579 Query: 564 IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS-GIEGSGRLWSDKSEERCRFVDLFDAK 622 D +FE+ V+ D K G ++ ++ +GR +D ++ R V + K Sbjct: 580 TKDIKMFEIDKVFHAD-----KDSETGAKEFTNLAFVATGRENNDDFTDK-REVTFYSVK 633 Query: 623 ADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD-FFGL 680 +++ F V ++ +R S P + + + + EI G+ G P I D ++ + Sbjct: 634 GALENLLNEFHVKVEYVR--SDQPGFLKAQSARLFINNEEI--GFLGLLDPVIADNYYEI 689 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 +PI E+ LD I +K+ + + V + +KR+ + IV +I + II +V Sbjct: 690 KDPIYICEINLDKIFEGKKEIKREFRKVDFPA---IKREYSMIVPLNIEFKEIQEIIISV 746 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +++D +FDV++GK++ E K S+ + ++ + T ++++ + I+E++ K Sbjct: 747 ADIVEDFKIFDVYRGKNIEEDKTSITVSIVYRSENKTLTEEEVNQVERSILESLNNK 803 >gi|315655605|ref|ZP_07908503.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC 51333] gi|315489669|gb|EFU79296.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii ATCC 51333] Length = 872 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 252/887 (28%), Positives = 416/887 (46%), Gaps = 99/887 (11%) Query: 1 MKF-TLSWLK--DHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WL+ + D S ++ L +GLE E + P +V+S+ Sbjct: 1 MAFVSIEWLRRWTAVPADTSASQLAKDLVKVGLEEEAIHTSGVTGPLVCGRVVSMVPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G+ ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGEEFNDAPGTGKEPSDIPSRSIICGAHNFKEGNHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---------IDAPVGGRLSDYLE 151 + + RK G S GM+CS +EL L DS I+ L + AP G + L Sbjct: 120 DFAIATRKTYGHISDGMICSARELGLGQDSNGIIVLEEYLGERGVGVPAP-GTDMLPILG 178 Query: 152 LSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS------CPLSSES-IPLEI 204 L+ ++++++TP+R C +RG+ + + K + ++ P +++S P+EI Sbjct: 179 LNQELLEINITPDRGYCFSMRGVGREYSHSTGAKFTDWGLAENLKNGLPAANDSGFPVEI 238 Query: 205 KFDLDDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVS 257 +D++ +G C V+G+ N P WM RL++ G+RSIS VD+TNYV Sbjct: 239 ----EDAAPIRGHVGCDRFVARIVRGLNPNAPTPQWMVARLESAGMRSISLPVDVTNYVM 294 Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRIQS 312 LD G P H +D +++ L VRRA GE+ LD+ E L ++++I R+ Sbjct: 295 LDLGQPMHAYDLDKVTGPLVVRRARQGEQHTTLDDVERTLDAEDLLITDCQGGHGARVLG 354 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 IAG++GG +++T+VL+E A +D +++ARS + + +++ RFERG D + + PV Sbjct: 355 IAGVMGGADTEMTESSTNVLLEAAHFDAVSVARSARRHKLPSEASKRFERGSDPE-LPPV 413 Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERL 431 + +L GG D + KP+ V + + RL G++ + +L + Sbjct: 414 AAQYAAELLVEYGGGTIDAGVTDVNHVKPQPTVALPFTAATRLIGVEYSPQRVEELLRAI 473 Query: 432 GFSVI-GEYDKFEVSVPSWRQDVE-EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS 489 G +V + D F V PSWR D+ A L+EEI R+ G ++I S +P+ + S Sbjct: 474 GCNVTKSDADTFAVVPPSWRPDLAGGPAHLIEEIARLDGYEKIPSV-VPVGPAKIGNPAS 532 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL---FGGGQRE-LEILNPISADMSNMR 545 L+ R V LA + EV+ + F+ E ++ +R+ +++ NP++ D +R Sbjct: 533 LRTRRE--VSDTLAEAGLTEVMTYPFLGNEHDLMGLPVDDPRRDTVKLANPLADDSPALR 590 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMAAGI 591 +SLL LL RNV R AIFE+ V E + E + + AG+ Sbjct: 591 SSLLDTLLDTASRNVSRGNPRVAIFELDQVVSAHGVIPAPIPGVEEKPSDEAMQALRAGV 650 Query: 592 RK---------GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 K + IE S + + + P + Sbjct: 651 PKQPWHVAAVLAGNAIEASPHDAARAWDWADAIELAIRVAVSQGLAVRPEALGTGGQAAI 710 Query: 643 GAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 AP +HPGR I+ A VLGY GE HP + FGL C FE+ LD+I +K Sbjct: 711 AAP--FHPGRVAQIRVGAFTGGKVLGYAGELHPKVCQNFGLPPRTCAFELDLDAI---EK 765 Query: 700 KRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQ-GK 756 R K ++ +S+ K DLAF+V Q +PA + N I K + L++++ +FDVF+ + Sbjct: 766 SRPKDAFQLRPVSTFPAAKEDLAFVVKQDVPALKVANAIAKAGEGLVEELRLFDVFENAE 825 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGEG+KS+A + ++ T +I+ +RI++ V K A LR Sbjct: 826 QLGEGRKSLAFALRLRAADHTLSPQEIKETRNRIIKKVEKTCQATLR 872 >gi|297588548|ref|ZP_06947191.1| phenylalanyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] gi|297573921|gb|EFH92642.1| phenylalanyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 53516] Length = 790 Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 228/824 (27%), Positives = 420/824 (50%), Gaps = 56/824 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIV-KVLSVERNPDL 58 M ++WLKD++D D S++ I D L+ G VE +D + L+ IV K+ ++++P+ Sbjct: 1 MLLPINWLKDYVDVDESIKTITDRLSETGSHVESLIDKSKYLNDKLIVAKIKKIDKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I+ +DTG + +I+VV GA N++ + +A G+ +P ++++ ++GI S GM Sbjct: 61 DRLSIVTLDTG-NSDIEVVTGAKNIKEDMFVCYAQVGATLP-GDIVLKKADLKGIMSPGM 118 Query: 118 MCSEKEL-----MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + S +E+ ++ +S + + + +G +++ LE+++PII+ +TPNR DC+ V Sbjct: 119 LTSFEEMGFETSVVDKNSKDGIAVLSENKMGETVTNALEINEPIIEFEITPNRPDCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + A+ K+K +I E I + + C + VK V+ +P Sbjct: 179 GMAREYAASFGKKIKYPSIEIKKFEEDINDYVNSVDIQTDKCTRYVARVVKNVKIADSPQ 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ RL G+R I+ +VDITN+V L+ G P H +D +I+D + + +K LD+ Sbjct: 239 WLKNRLIQSGIRPINNIVDITNFVMLETGQPIHAYDLDKIADKKIIVKESGSQKFTTLDD 298 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E +LS D+++I IAGI+GG + NTT+VL+E A +D I S + L + Sbjct: 299 VERELS-DDIIICDGENTLGIAGIMGGFDSEITSNTTNVLIEAASFDSDTIRLSSRRLAL 357 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEV 411 TD+ RFE+GV Q + LI + T + I K + + Sbjct: 358 RTDASTRFEKGVSQQLCDLASLRVCKLIEDITNATVINNSIDVITCEEKLEDVELSFKKC 417 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L G D+ ++ IL+ L F ++ E D K +V VP RQDV DL+EE+ RIY + Sbjct: 418 NDLLGSDISNDEIKNILQLLEFKIVSEDDEKIKVKVPFHRQDVSIYQDLIEEVGRIYTFE 477 Query: 471 QIKSEPL--PLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLF 524 +I ++PL L + V+ + +++ + K+ L S EV+++SFIS + ++++ Sbjct: 478 KIGAKPLIGKLKRGVKSEERIAIDNT-----KKALYSMNTFEVLSYSFISPKSYSKAMVE 532 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HVYENDTP 581 + ++++NP+ D S MR++++P +L +N I D ++E+ H+ N+ Sbjct: 533 MDDDKLIKLINPLGEDFSVMRSTIIPNILDILSKNYKNKIKDICVYELGNTFHLVGNERI 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 E +K +A G ++ D D +D ++ L++ + + Sbjct: 593 ETKK-LALG-------------MYGD--------YDFYDVRSMILALFNELGIENYEIIK 630 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + YH GR I E++ FGE + D + N + E++ + K Sbjct: 631 NKDNKTYHSGRCADILVHGELI-ATFGEISYEVRDNYDFDNRVYVGEIHFTELI----KH 685 Query: 702 TKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLG 759 KK+ S +P ++RD+A +VD+ + + + I+ + + +I DV +FD ++G+ + Sbjct: 686 MDFKKIYSPISKYPSIERDIALVVDRELESIEIEKEILNHSNGIIKDVYLFDEYKGEHVD 745 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS+A +++ Q +T +D I + + I+ ++ +K NA LR Sbjct: 746 NDKKSLAYRIIYQSKDETLKDKTIEKIQEEILNSLEQKFNATLR 789 >gi|313887935|ref|ZP_07821614.1| phenylalanine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846101|gb|EFR33483.1| phenylalanine--tRNA ligase, beta subunit [Peptoniphilus harei ACS-146-V-Sch2b] Length = 791 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 232/832 (27%), Positives = 406/832 (48%), Gaps = 69/832 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLKD++D D ++K+ D L++ G VE + E L + +V +E +PD D Sbjct: 1 MLLPIKWLKDYVDFDFDVKKLADGLSNSGSHVESIIIPSEGLDKIVVGRVEKIENHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++ G + +Q+V GA NV G + A GS + I K+RG+ES GM+ Sbjct: 61 KLVICSVNVG-DEVLQIVTGAKNVFEGAIVPVALHGSTVAGGTKIKK-GKLRGVESNGML 118 Query: 119 CSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL + + I P +GG + L + + I+++ +TPNR DC+ + Sbjct: 119 CSLEELGYETSVIPKEARDGIFIFPEGTEIGGSAMEALFMDNEILELEITPNRPDCLSIM 178 Query: 173 GIALDLVAAG--LGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 G+A++ A+ + KEI I + S + D++ D+ C + +K ++ Sbjct: 179 GMAVETAASFDLKARHKEIKIENQVDDFSDYFD---DIEIDTENCTRYYSKILKNIKIGP 235 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ L G+R IS +VD+TN+V L+ G P H FD + S + VR A GEK + Sbjct: 236 SPLWLQAYLMQAGVRPISNIVDLTNFVMLEYGQPLHAFDLDSLHSKKIVVRMAKDGEKTV 295 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L+ D+++I I +AGI+GG + D T +VL+E A ++ NI ++ + Sbjct: 296 TLDGETRKLASDDILITDGQEIIGLAGIMGGLDSEITDKTVNVLLEGANFNKENIRKTSR 355 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR---------NITY 399 L + +++ RFE+G+D + + L AS++ IA N + Sbjct: 356 RLNLRSEASSRFEKGLDPNLAKTAVDRVCQL--------ASEMGIAEVVDGSKDVGNFSQ 407 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 + ++I + ++ L G+D IE+ IL RL + D +PS R D++ + DL Sbjct: 408 EEKEIKLRHQKLVDLIGVDFTIEEVANILNRLEIETEIKGDCLLAKIPSVRLDLDIEEDL 467 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI--- 516 +EE+ R+YG D+I+ + L + + R + R +K +L E + +SF+ Sbjct: 468 IEEVARVYGYDKIEPKKL-MGTLTVGRKPRFRNVEDR-IKNLLTGLGYSEFMTYSFVSPS 525 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 S E++ + + ILNP+ D S MRT+L+P ++ A +N R + FE+ + + Sbjct: 526 SYEKANYQEDEKNIIRILNPLGEDYSVMRTTLVPSMIDALAKNYVRGNENVGGFEIGNTF 585 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 E++ P + + G + D + K +++ I F+ Sbjct: 586 FPTEDELPSEKLKLTMGFYE---------------------LGDFYYLK-ESIEKILWFL 623 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 ++ L S+ HPGRS + E LG FGE HP +L+ +GL E+ D Sbjct: 624 GINKLEVRRKETSFLHPGRSAEFLLNGE-SLGVFGEVHPKVLENYGLKKKAYVAELDFDK 682 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDV 752 I + T K L +KRD AFI+D+ + + L I K + L++ VFD+ Sbjct: 683 I-VENTIDNYTYK--DLPKYPTMKRDFAFIMDRDVDSVDLEKIAKKYGKDLLESFKVFDI 739 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++G+++ +GKKSVA ++ + T + ++ + +++V + + A LRS Sbjct: 740 YEGENIEDGKKSVAFSLVFRAADRTLEESEVTEICEKVVAEIESEIKAKLRS 791 >gi|187250559|ref|YP_001875041.1| phenylalanyl-tRNA synthetase subunit beta [Elusimicrobium minutum Pei191] gi|186970719|gb|ACC97704.1| Phenylalanyl-tRNA synthetase, beta subunit [Elusimicrobium minutum Pei191] Length = 791 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 223/802 (27%), Positives = 391/802 (48%), Gaps = 36/802 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MK SWLKD++D D+S E++ L S+G+EV ++ K++++ER+P+ D Sbjct: 1 MKILYSWLKDYIDIDLSAEELAQKLNSVGIEVAEIQKTGVDFEGVHTAKIVTLERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +++ +DTG +VVCGA N+ G++ A G+ + ++ +IRG++S GM+ Sbjct: 61 KLSLVTLDTGNGTR-KVVCGAGNLEAGIIVPLAREGARL--GKTVLKAAEIRGVKSDGMI 117 Query: 119 CSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L+ I+ L + G +S +D + ++ +T NR D + G+A + Sbjct: 118 CSSDELGLTATRQKGILHLDKNLKPGIDVSTLYPKADYLFELEITSNRPDLLSHLGVARE 177 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 L LKEI + + E +++K + ++ C + V+GV+N +P WM+QR Sbjct: 178 LSILLNIPLKEIPLK-EVKEEGESIDVKIETEN---CARYTSRVVRGVQNAQSPEWMKQR 233 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+G+ +ALVDI+NYV D G P H FD S I + + +R+A GE LD + +L Sbjct: 234 LSAMGVNPKNALVDISNYVLYDIGLPLHFFDLSDIGESVIIRQAAEGEVFETLDGSKLNL 293 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +++IA + +AGI+GG +G + T ++ +E A ++P I +S K G +++ Sbjct: 294 TAQDILIADKNKGLCLAGIMGGIGSGIKETTKNIFIEAAYFNPPAINKSAKKYGFSSEAS 353 Query: 358 YRFERGVDLQGMIP-VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RFERG D+ G+ P L +L+ LCGG AS + Y P ++ F +++++ G Sbjct: 354 QRFERGADI-GITPKALARATNLVQELCGGKASKSSDVYPVPYTPEEVSFTPEDIEKILG 412 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + + E I RL ++ + P+ R+D+ K DL EE R YG+D+ Sbjct: 413 MKIDEERFKEIFSRLAQKFDASLKPWKFNSPTHRRDLNHKWDLAEEAARFYGLDK----- 467 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKR---VLASRAMMEVVNWSFISKEQSVLFGGGQRE-LE 532 LP+++ S T + L S E N+ F+ + F + +E Sbjct: 468 LPVSETRASVAFSDNPRNTDTSAKFASALISAGFYECKNFDFLCENDLQNFSYKKEFCVE 527 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--NDTPEGQKYMAAG 590 I NP++ D MR +L GLLK N R ++ IFE Y+ P + ++ AG Sbjct: 528 IANPLNEDYQYMRPTLFAGLLKNANFNQSRGTTEYKIFETGKEYQIMKGFP-AETWVMAG 586 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 I G+ + ++DK+ E D + K + ++ ++ AP++ HP Sbjct: 587 IVCGAV----REQYFADKTPE----ADFYFVKGAVEAALKNIAGVN-FSASKEAPAYMHP 637 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 I + G+ G+ HP +GL N + YL+ + +K + K Sbjct: 638 KICADIIVDGKQKAGFIGKIHPLTAKAYGLKNDDI-YAFYLNIKVLEKKFNAQEFKPAED 696 Query: 711 SSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVDRLID-DVTVFDVFQGKSLGEGKKSVAIQ 768 ++ P RDL+F++ + + ++ + + V + DV+ G +L EGKKS+ + Sbjct: 697 AAQFPSSYRDLSFVIGKDVGYAKVLQAVNSSGVWSKMSVDLMDVYTGANLPEGKKSLTLN 756 Query: 769 VLIQPLKDTFRDDDIRILMDRI 790 + T +D ++ M++I Sbjct: 757 FAFWLMDRTLKDAEVEENMNKI 778 >gi|319954872|ref|YP_004166139.1| phenylalanyl-tRNA synthetase beta subunit [Cellulophaga algicola DSM 14237] gi|319423532|gb|ADV50641.1| phenylalanyl-tRNA synthetase beta subunit [Cellulophaga algicola DSM 14237] Length = 808 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 239/833 (28%), Positives = 394/833 (47%), Gaps = 55/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK L E+ + LT +GLEVE ++ E+ L + VLS E++P Sbjct: 1 MKISYNWLKQFLQISWEAEQTAELLTDLGLEVEGIEAFESTKGGLKGIVVGHVLSCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D I +D G IQ+VCGA N+ G A G+ + + KIRG Sbjct: 61 NADKLKITSVDIGAENPIQIVCGAANIAQGQKVPVATIGTKLYTKEGEEWTIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E E+ L + IM L + G S E+ +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDEIGLGESHDGIMVLSDELIAGTPCSTIFEVENDTVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIP--------LEIKFDLDDSSLCKGFAMCCVK 223 G+A DL A LK+ +I L + SI L+I D+ ++ L +A + Sbjct: 181 LGVARDLKAG----LKQKDIQLELITPSISNFHITNRSLKIDVDVLNNKLAPRYAGITIN 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 + +PNW++ RLKA+GL I+ +VD+TNYV + G P H FDA++I D + V Sbjct: 237 NLTVQESPNWLKNRLKAIGLNPINNIVDVTNYVLHELGQPLHAFDANKIKDNKIKVTTLA 296 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +G K LD E +L D+++I + IAG+ GG ++G +TT + +E A +DPI+ Sbjct: 297 TGTKFKTLDGVEIELHEDDLMICDAEKPLCIAGVYGGLNSGVTKDTTSIFLESAYFDPIS 356 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKP 401 + ++ K G TD+ +RFERG+D+ + LK LI + GG SDI K Sbjct: 357 VRKTSKRHGFNTDASFRFERGIDINSVEYCLKRAAILIQQIAGGDITSDIIDLYPNKEKD 416 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 ++ ++ RL G ++P + IL L + + +++P +R DV + D++ Sbjct: 417 YQVFLTYKKINRLIGQEIPQDIIKSILASLDIKLNNVTETGLGLTIPFYRVDVRREVDVI 476 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR-------TRYVKRVLASRAMMEVVNW 513 EEILR+YG + I ++K N S+ + + LA++ E++ Sbjct: 477 EEILRVYGYNNI--------NFKEKLNASVATTSPFEDYKIQSIIGDFLAAKGFNEIMTN 528 Query: 514 SFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S S + + E ++I+NP+S D+S +R +LL L+A N +R + FE Sbjct: 529 SLTSPIYNEQLEKLKEEHTVKIINPLSNDLSVLRRTLLFSGLEAISYNSNRKRQNLKFFE 588 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 Y N + + ++ + + EGS W + + F K++ S+++ Sbjct: 589 FGKSYHNYSGQQEENKHLVLFLTGNKNEGS---WIAPAAK----TSFFTLKSNVESILDR 641 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 ++ S S I S + + G +IL F L N I + Sbjct: 642 L----GIKNLSTVISKSDDFSEAIAMKSGKTEIVNLGTVKKSILKSFDLKNEILYADFKW 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 D I K + K +S VKRD A +++ + + NI ++ ++ +V++F Sbjct: 698 DEILTLIKDQKIGYK--EISKFPEVKRDFALLINNEVSFEDIHNIAFETEKTILKEVSLF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV+ G L +GKKS A+ ++ K T D I +M + +N K A LR Sbjct: 756 DVYTGSKLPKGKKSYAVSFTLKSEKATLTDKQIEKIMSKFKQNFETKLGAELR 808 >gi|291556600|emb|CBL33717.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium siraeum V10Sc8a] Length = 791 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 229/817 (28%), Positives = 396/817 (48%), Gaps = 61/817 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAI 62 + WL D++ D+ +++ +T G +VE + ++ + KVL +ER+PD + I Sbjct: 1 MRWLNDYVKADMPIKEFVADMTMSGSKVETYHKMSDPINNVVVAKVLKLERHPDSEKLWI 60 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 ++D G+ + +Q+V A N+ G + S I + I K+RG+ S GMMCS Sbjct: 61 CQLDAGRDEPVQIVTAAQNLFEGAIVPACMHNSTIADGTKITK-GKLRGVASNGMMCSYA 119 Query: 123 ELMLSDDSA-------SIMELPIDAPV-----GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 EL L+ D I+ L D V G + + L+ D I++ +T NR DC+ Sbjct: 120 ELGLTKDDFDYPVADDGILILNNDPDVDSFRMGMDICEALQTDDTIVEFEITNNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A + A + S I EI ++++ LC + VK V+ + Sbjct: 180 VLGLAQEASATFDIPMNYTEPSFKGVDGDITKEISVSVENTKLCSRYMAALVKNVKIGPS 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P WM +RL+A G+R I+ LVDITN+V L+ G+P H FD + D + VR A GE + Sbjct: 240 PKWMARRLRASGVRPINNLVDITNFVMLEYGHPMHAFDLRYVEDNRIVVRNAKEGETLKL 299 Query: 290 LDN--QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD + L+P+ ++IA + +IAG++GG+H+G ++TT V+ E A +D +++ R+ Sbjct: 300 LDEMAEPVKLTPEMLIIADGKKPIAIAGVMGGEHSGIMEDTTTVVFEAACFDGVSVRRTA 359 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVF 406 + +G T++ RFE+G++ LK + LI L CG + I + Y P ++ Sbjct: 360 RKIGERTEASSRFEKGLNPVNAEKALKRALQLIEMLGCGEVVNTIIDENHSEYVPERLKH 419 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ + + IL++LGF Y+ E+ VP R D+ D+ EE+ RI Sbjct: 420 DYKWVNEHLGSDISENEQIEILKKLGFG----YENGEIIVPPTRIDMHRACDVAEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-- 524 YG ++I S +P + KR + +Q V + + EV+ +SFIS + L Sbjct: 476 YGYNRIPS-TIPKLSSQGKR--TPEQIFEDKVISLALALGFYEVMTYSFISPKDYELLRM 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ + + P+ D S MRTS L +++ RN + FE++ Y P G Sbjct: 533 DEKSRKSVVLRRPLGEDTSVMRTSALTSMMEVVRRNWSNRNLEGRFFEIAREY---FPTG 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--E 641 + + + G+G D F AK A V+ + L ++ + E Sbjct: 590 ENQLPVERDVLCYALYGNGE-------------DFFTAKGVAEEVMAK-LGLKNVVYTAE 635 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD--SIPISQK 699 P+ +HPGR + + E++ GY G+ HP FG++ EVY S+ + Sbjct: 636 KNNPT-FHPGRCAKVTVNGELI-GYVGQLHPEAAANFGVNT-----EVYCATLSMEVMFN 688 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLG 759 K L RDL+ + ++ +P+G +V +I+ + ++ V +FD+++G+ + Sbjct: 689 NANGDVKYTALPKFPSTYRDLSLVCNEDVPSGDIVAVIEKTAKHLEAVRLFDMYKGEQVP 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 G KS++ +++++ T DD+ D +V V+K Sbjct: 749 AGMKSLSYKLILRKKDATLTDDE----ADAVVAKVLK 781 >gi|187932405|ref|YP_001886661.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium botulinum B str. Eklund 17B] gi|187720558|gb|ACD21779.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium botulinum B str. Eklund 17B] Length = 791 Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 236/833 (28%), Positives = 407/833 (48%), Gaps = 73/833 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK SWL+D++D +VS +++ D LT G ++E+ + + + K+ +E++PD D Sbjct: 1 MKVPFSWLQDYVDINVSPKELGDKLTLTGSQLEELIIQGDVIDKVVTGKITEIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + IQ+V A N++ + A GS + + I K+RG+ S GM Sbjct: 61 KLSICQVDIGT-ETIQIVTAATNMKEQDVVPVALHGSTLADGTKIKK-GKLRGVPSNGMF 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL + D +M LP D +G + + L+L+ I+D +T NR DC+ + G+A Sbjct: 119 CSEEELGTAGDEPVHGLMILPTDTELGVEIKELLKLNKAILDFEITSNRPDCLSIVGMAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + AA K N+ +S ++ E+ ++ D LC + VK V+ +P WM+ Sbjct: 179 ETAAALRTTYKMPNLEYKVSGNGNVESELNVEVKDD-LCLRYMARKVKNVKVKPSPGWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQE 294 +RL G+R I +VDITN++ L+ G P H +DA IS + + V RA SGEK LD E Sbjct: 238 ERLLEAGIRPIDNIVDITNFIMLELGQPMHAYDAREISTNKIVVERAESGEKFTTLDEVE 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + I D +I +AGI+GG ++ ++TT+V+ E A +D NI + K L + + Sbjct: 298 RQLDDSMLCIKDDNKIVGLAGIMGGLNSEIKEDTTEVIFESANFDGTNIRVNSKKLNLRS 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKR 413 ++ RFE+ +D + +LI L G + I N +P K++ ++ V + Sbjct: 358 EASGRFEKDIDPNLAKLAIDRACALICELGAGEVIEGTIDIYNKKKEPGKVIVDSNWVNK 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G ++ E+ + L+ + + D V+ P++R D+ K D+ EEI RI+G D I Sbjct: 418 FLGTNLSKEEMKKCLDSVDLFTEIDGDNLNVTAPTFRIDIAIKEDIAEEIARIHGYDVI- 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--------EVVNWSFIS-------- 517 P + V R +Y R+L + +M + +++SF+S Sbjct: 477 --PATIFSVATSR-------EPKYRNRLLDDKVVMLATGSGLNQSISYSFVSPRVFDKIN 527 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S L + ++I NP+ D S MRT+ +P +++ GRN R +FE++ +Y Sbjct: 528 VPEDSEL----RNVVKIKNPLGEDYSVMRTTTIPSMMECLGRNYSRNNDYVRLFEMAKIY 583 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 E P + + G ++ D C ++DL K ++I+ Sbjct: 584 IKNEDETKIPTERNILTIG-------------MYGD-----CDYLDL---KGAVENIIDG 622 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +S YHPG++ + +V G GE H ++ + +G+ P E+ L Sbjct: 623 LGIKNSKYERESENVSYHPGKTAKLVIGKNVV-GTLGEVHLDVTENYGIDVPCFIAELNL 681 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 D++ S K K L V RD+A +V+ I + I+ L++ V +F Sbjct: 682 DALYESADMDRKYKA---LPKFPAVTRDIALLVEDSILVQEIEECIRKAGGNLVEKVQLF 738 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++GK + +GKKS+A + + K T D ++ + D+I+ ++ K A LR Sbjct: 739 DIYKGKQIPDGKKSIAYAIAYRADK-TLTDKEVNKVHDKILRSLEYKLGATLR 790 >gi|254413812|ref|ZP_05027581.1| phenylalanyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] gi|196179409|gb|EDX74404.1| phenylalanyl-tRNA synthetase, beta subunit [Microcoleus chthonoplastes PCC 7420] Length = 816 Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 226/844 (26%), Positives = 415/844 (49%), Gaps = 68/844 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L+WL++ +D ++ ++I + LT+ G EVE ++++ L+ +V KVL V+ +P+ D Sbjct: 1 MRISLNWLRELVDVTLAPQEIAEILTNAGFEVEDIEDQRQLADGVVVGKVLDVQPHPNAD 60 Query: 60 -CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + ++D G + + +VCGA NVR A G+ +P ++ + K+RG+ S GM Sbjct: 61 KLRVTKVDIGDANDPVTIVCGAANVRAEAYVPVATVGTYLPTVDLKIRSSKLRGVRSEGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 +CS E+ L +S I VG L L+D I+D++ T NR+D + + G+A Sbjct: 121 ICSLAEVGLEKESEGIHIFEAQTLQVGSDARPLLGLTDVILDLTATANRADALSMVGVAR 180 Query: 177 DLVA---AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 ++ A A L K ++ P + + L+I D C + ++GV+ +P W Sbjct: 181 EVAALTGASLNLPKTPELTIPQGTGGLTLKIS----DPKACPAYIGTVIEGVKIQPSPTW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSGEK 286 ++QRL+A G+R I+ +VDITNY+ L+ G P H FD R+ V + VR A E Sbjct: 237 LKQRLQAAGVRPINNVVDITNYILLEWGQPLHAFDRDRLQQVAGGKSLTIGVRFAKGEES 296 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD Q L ++I ++ R ++ G++GG+ + T ++++E AL++P+ I RS Sbjct: 297 LTTLDGQSRTLQSQTLLITANDRPVALGGVMGGEETEVHEGTENLVLEAALFEPVAIRRS 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ + T++ R+ERGV+ + K ++LI L G + +P + Sbjct: 357 ARSQSLRTEASTRYERGVNQAELGIAAKRAIALIQELAQGKP---IVQEVADTRPDPESW 413 Query: 407 MNSEVKRLSGI--------------DVPIEDSLRILERLGFSVIG----EYDKFEVSVPS 448 + S RL + D+ +D RIL LG + E K+ V+VP Sbjct: 414 VRSIELRLERVNQVLGPVDLGDEIGDIQPDDVERILTALGCQLESVESDEAVKWIVTVPP 473 Query: 449 WR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 +R +D+E + DL+EE+ R+YG D+ + P T+ LS+ Q R ++ + + Sbjct: 474 YRYRDLEREIDLIEEVARLYGYDKFCEDLPPKTE---PGYLSIDQVLIRKIRETFRAAGL 530 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 E++ +S + E+ + ++ + NP+ + S +RT LL GL++ N+++ Sbjct: 531 TELLQYSLVKPEEK------EEQISLSNPLFVEYSTLRTDLLSGLIEVAQYNLEQGNGVL 584 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIR-KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 FE+ ++ D + A G R G G + S W+ ++ + ++AK Sbjct: 585 NGFEIGRIFWRD----EDGFAEGDRVAGILGGDPSRGKWTRGGQDAP--MSWYEAKG--- 635 Query: 627 SVIEPFVSLDSLRFESG---APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 +IE L E S HPGR+ + + LG FG+ HP + L + Sbjct: 636 -IIESLFERLGLTVEYQPDRQDSRLHPGRTASLWIQGD-RLGRFGQLHPQLRAELSLPDE 693 Query: 684 ICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-V 740 I GFE+ LD + + Q + + V+ S+ RD+AF V + + + Sbjct: 694 IYGFELDLDVMLNALVQDENLTPRFSVY-STFPAADRDIAFFVPDTVSVADIQRTTQQAA 752 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 L++ V +FD ++G+ + EG++S+A +++ + T +D ++ ++ + +++K Sbjct: 753 GSLLESVQLFDEYRGERVPEGQRSLAFRLIYRAGDRTLKDKEVESAHQKVRDALLEKFGV 812 Query: 801 VLRS 804 LRS Sbjct: 813 SLRS 816 >gi|54023887|ref|YP_118129.1| phenylalanyl-tRNA synthetase subunit beta [Nocardia farcinica IFM 10152] gi|66773884|sp|Q5YYH6|SYFB_NOCFA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|54015395|dbj|BAD56765.1| putative phenylalanyl-tRNA synthetase beta subunit [Nocardia farcinica IFM 10152] Length = 834 Score = 297 bits (761), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 250/837 (29%), Positives = 405/837 (48%), Gaps = 80/837 (9%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-----PFTIVKVL 50 M+ SWL + ++ V+ E++ +GLEVE+VD E + P + +V Sbjct: 1 MRVAQSWLTEIIERTNAGWSVTPEELDAGFVRVGLEVEEVDRLERVGGDIERPLVVGRVA 60 Query: 51 SVERNPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + + I ++D G + +++CGA N VG L V PG +P I + RK Sbjct: 61 EITELTEFKKPIRFCKVDVGAPELQEIICGARNFAVGDLVVVVLPGGVLPGGFRITS-RK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + D + I+ L P A G ++ L L D +I++++TP+R Sbjct: 120 TYGHVSNGMICSVAELGIGKDHSGILVLEPGTAEPGTDANELLGLDDTVIELNITPDRGY 179 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-R 226 C VRG+A +L A G L+ ++ + E ++ +S C FA V G+ Sbjct: 180 CFSVRGLAREL-ACGF-DLEYLDPAVRTLPEDAAEAWPITIEPASQCTRFAARRVTGIDP 237 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 N V+P W+++RL G+R IS VD+TNYV L+ G P H FDA+++S L VR A GEK Sbjct: 238 NAVSPWWLQRRLLLSGVRPISPAVDVTNYVMLELGQPLHAFDAAKLSGGLVVRTAKPGEK 297 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD+ E L ++VVIA D S+AGI+GG + TTDVL+E A W+P+ + R+ Sbjct: 298 LRTLDDTERTLDAEDVVIADDSGAVSLAGIMGGASTEVGEGTTDVLLEAATWNPLLVYRT 357 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIV 405 + +++++ R+ER VD + + L +L+ + GGT + R T P I Sbjct: 358 ARRHKLVSEAGKRYERVVDPEINVAALDRAATLLAEIAGGTVEPVLSDVRVPTPAPEPIR 417 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD------KFEVSVPSWRQDVEEKADL 459 R++G+ P + R L ++G V D + V+ PSWR D+ + ADL Sbjct: 418 MDIDLPDRVAGVAYPTGTAARRLAQIGCHVEVSVDEESGHGQLVVTPPSWRPDLAQPADL 477 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VEE+LR+ G++QI S + R L+ +Q R R V R LA +EV F+ Sbjct: 478 VEEVLRLEGLEQIPSV---VPTAPAGRGLTPEQRRRRAVSRALAFAGGVEVPPPVFLPAG 534 Query: 520 QSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +G + +LNP+ + + + T+LLPGLL+ RN+ R D ++ ++ Sbjct: 535 VFDTWGLDADDPRRTTTRVLNPLDVERAELATTLLPGLLEVAQRNISRGARDLTLYGIAQ 594 Query: 575 VY--ENDT------------------------PEGQKYMAAGI--RKGSSGIEGSGRLWS 606 V DT P+ ++AA + R+ G G GR Sbjct: 595 VVLPTGDTKPVAPLPVDRRPTDEQIAELLGSLPDQPVHVAAVLTGRREPRGPWGPGR--- 651 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 ++E F + A VIE R + W HPGR + +V GY Sbjct: 652 -QAEAADAFALVDAVADAAGVVIE--------RRPAAYLPW-HPGRCAELVVEGRVV-GY 700 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 GE HP +L+ GL C E+ LD++P+ + ++ V +S V +D++ V + Sbjct: 701 AGELHPAVLERSGLPARTCALELDLDALPLRE-----SRPVPVVSPFPAVLQDVSVSVSK 755 Query: 727 HIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + A + + +++ L++D+ +FDV++G GEG+KS+ + + T +D+ Sbjct: 756 SVAAAAVESALRSGGGELLEDIALFDVYEGAQAGEGRKSLTYALRFRAPDRTLTEDE 812 >gi|291539018|emb|CBL12129.1| phenylalanyl-tRNA synthetase beta subunit [Roseburia intestinalis XB6B4] Length = 805 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 255/850 (30%), Positives = 394/850 (46%), Gaps = 93/850 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L W+KD + D + ++ D +T G +VE +N E L I +V S+E++PD Sbjct: 1 MNTSLKWIKDLVPGLDCTPQEYMDAMTLSGSKVEGYENMDEDLDKIVIGQVKSIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPG--SCIPENNMIVNVRKI 109 D I ++D G + IQ+V GAPNV G L G G E + + K+ Sbjct: 61 DKLVICQVDIGT-ETIQIVTGAPNVTEGCKVPVVLDGGKVAGGHDGSKTEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL + D + LP DAPVG YL L D +++ +T Sbjct: 120 RGVESNGMMCSIEELGSNRDMFPLAPENGLYILPEDAPVGESAISYLGLDDTVVEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC + GIA + A + ++ ++E + IK + D LC + VK Sbjct: 180 NRVDCFSILGIAREAAATFGKEFVSPVVTETGNNEDVNDYIKVSVKDDKLCSRYTARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 +R +P WM+ RL+A G+R I+ +VDITNYV + G P H +D I D + VRRA Sbjct: 240 NIRIAPSPEWMQCRLRAQGIRPINNIVDITNYVMEEYGQPMHAYDLDTIEDREIVVRRAA 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE+ + LD QE L D+V++ DGR IAGI+GG+++ DN +L E A +D Sbjct: 300 KGEQFVTLDGQERTLD-DSVLMICDGRKAIGIAGIMGGENSMITDNVKTMLFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK- 400 NI SG+ +G+ TD+ +FE+G+D I + LI L G + K Sbjct: 359 NIRLSGRKIGLRTDASAKFEKGLDPNTAIEAMNRACQLIEELGAGEVVGGVVDVYPNVKG 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++I F + +L G D+ E L ++ YD EV VPSWRQD+E AD Sbjct: 419 DKRIPFEPEKYNKLLGTDIAKETMLAYFSKIDLG----YDPASNEVIVPSWRQDLECDAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS 517 L EE+ R +G D+I P L E + R V R +A + + +SF S Sbjct: 475 LAEEVARFFGYDKI---PTTLPSGEATTGKLTFKLRIEAVAREIAEFCGFSQGMTYSFES 531 Query: 518 ---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + S L ++ + I NP+ D S MRT L G+L + N +R + Sbjct: 532 PKVYDKLLLPQDSPL----RKAVVISNPLGEDFSIMRTISLNGMLTSLSTNFNRRNKNVR 587 Query: 569 IFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E+ ++Y P ++ EER +F D F Sbjct: 588 LYELGNIYLPKQVP-----------------------VTELPEERMQFTLGMYGEGDFFT 624 Query: 621 AKADALSVIEPFVSLDSLRF------ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 K VIE F+ ++ E+G P + HPGR + V+GY GE HP + Sbjct: 625 MKG----VIEEFLYKAGMKLKPEYDPEAGKP-FLHPGRQANVVYDG-TVIGYLGEVHPTV 678 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + + + + LD +P + + K ++ RD++ +V + + AG + Sbjct: 679 AANYAIKERV--YVAVLD-MPEIVSRASFDHKYEGIAKFPAAARDISMVVPKKVLAGDIE 735 Query: 735 NII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I + + ++ +FD+++G + G KS+A + + D DI MDRIV+ Sbjct: 736 KIFDEKGGQFLEKYDLFDIYEGAQIKPGYKSIAYSLSFRAKDRNLEDADITGAMDRIVK- 794 Query: 794 VVKKTNAVLR 803 ++ A LR Sbjct: 795 ALEHVGAELR 804 >gi|315225395|ref|ZP_07867209.1| phenylalanyl-tRNA synthetase beta subunit [Capnocytophaga ochracea F0287] gi|314944668|gb|EFS96703.1| phenylalanyl-tRNA synthetase beta subunit [Capnocytophaga ochracea F0287] Length = 810 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 235/831 (28%), Positives = 401/831 (48%), Gaps = 50/831 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK +L ++ E LT +GLEVE +++ E+ L + VL E++P Sbjct: 1 MKISYNWLKQYLKLEMPAEDTAVILTDLGLEVEGIEHFESVKGGLKGVVVGHVLECEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D I ++D G +Q+VCGAPNV G + A G+ + + + KIRG Sbjct: 61 NADKLKITKVDVGGEAPLQIVCGAPNVAQGQKVLVATIGTVLYDKEGKPFEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L VG S E+ +D + ++ LTPNR+D + Sbjct: 121 ESYGMICAEDELGLGESHDGIMVLDSKWEVGTPASKVFEVETDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + K + + P ++ L+I ++ + L + + VR Sbjct: 181 YGVARDLRAGLMQKGISLELITPSITKFHVDNRSLKIDIEVQNKKLVPRYTGVTISNVRV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 + +P W++ +LKA+G+ + +VD TNYV G P H FDA I + V+ A G K Sbjct: 241 DESPEWLQNKLKAIGITPKNNVVDATNYVLHGMGQPIHAFDADHIIGRKVIVKNADEGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E L+ ++++I + IAG++GG+++G T +V +E A +D +++ ++ Sbjct: 301 FKTLDGVERTLNAEDIMICDAEKPLCIAGVLGGENSGITHFTRNVFLESAYFDAVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK-- 403 K GI TD+ YRFERG++++ L + LI ++ GG +SD+ I + P+K Sbjct: 361 AKRHGINTDASYRFERGINIEDCKYALMYAAVLIENIAGGVISSDV-----IDFYPKKQE 415 Query: 404 --IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+ E + +L G + + IL L V ++ +SVPS+R DV+ +AD+ Sbjct: 416 DFQVFLTFEKIDKLIGQKISRDTIKAILHSLDIKVNSFTERGLGLSVPSYRVDVQREADV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EEILRIYG + + P L N + V L ++ E++ S +S++ Sbjct: 476 IEEILRIYGYNNVIF-PEKLNATMAHSNKYDDHNIQNVVADQLVAQGFFEIMTNSLVSEK 534 Query: 520 QSVLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HV 575 + + G ++ +++LNP+S+D+ MR +L+ L+ N +R +D +FE H Sbjct: 535 EITTYAGNPEQAVKLLNPLSSDLGYMRKNLVFSGLEVIAYNNNRKRSDLKLFEFGKNYHY 594 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + + E + + G+ + E + LF+ I P + Sbjct: 595 IDGNYTESKHLVLYLTGNTQPEYWGAPAQKTSFFELKGVVESLFERLGLKEITILPLEAN 654 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 D+L E G E +LG G +L F + + +++ + I Sbjct: 655 DTLSSE------------GFRWQIGETLLGTIGVVKSKVLKDFDIKQEVLVADLHWEVIL 702 Query: 696 ISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDV 752 ++ + KV++ +S V+RDLA ++D+ + L ++ L+ V +FDV Sbjct: 703 ----EQVQDHKVIYKEISKYPEVRRDLALLLDEKVTFADLYEKAYATEKNLLKHVNLFDV 758 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QG L EGKKS A+ ++Q T D I M + + K+ A LR Sbjct: 759 YQGDKLPEGKKSYALSFVLQDNNKTLTDKQIDKTMQCLQDAFEKQFGAALR 809 >gi|217964712|ref|YP_002350390.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|217333982|gb|ACK39776.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes HCC23] gi|307570727|emb|CAR83906.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes L99] Length = 802 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 229/827 (27%), Positives = 415/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPEHVETGVSAVTLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGMRPYNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + P+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEAPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVL 523 RIYG D+I P+ L LS Q R ++ L + + + +S S K+ + L Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSQKDATRL 531 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD+ + +IK + +L+ ++ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKDTDHAAISQVIKEHGGKLLVNIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ +++VE + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLHAIIR 802 >gi|313609200|gb|EFR84874.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria monocytogenes FSL F2-208] Length = 802 Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 230/827 (27%), Positives = 416/827 (50%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCFV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPEHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPAETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + +NTT V +E A++ +I + Sbjct: 295 EITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVTENTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFDRLGFVLEVKNDALIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVL 523 RIYG D+I P+ L LS Q R ++ L + + + +S S K+ + L Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSQKDATRL 531 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTVDWQKTPKPVDFFVLKGIVEGLVNKLGIKSELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ +I EI GY G HP + + L FE+ + ++ Sbjct: 643 WKQTEKEELHPGRTASLILEGQEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD+ + +IK + +L+ ++ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKDTNHAAISQVIKEHGGKLLVNIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ +++VE + +K +A++R Sbjct: 756 SLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQEKLHAIIR 802 >gi|28378266|ref|NP_785158.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum WCFS1] gi|38258526|sp|Q88WR2|SYFB_LACPL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28271101|emb|CAD64006.1| phenylalanine--tRNA ligase, beta chain [Lactobacillus plantarum WCFS1] Length = 805 Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 222/824 (26%), Positives = 406/824 (49%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ + +WL+D+L D+ +++ + + +EV+ V E L + VL+ E +PD D Sbjct: 1 MRISTTWLRDYLKLDIPADELAEKIERTAVEVDGVIRPSEGLKKVVVGHVLTCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A P S I + I K+RG+ S GM+ Sbjct: 61 HLHVCQVDVGESEPLQIVCGAPNVAAGEKVIVALPNSWIGGHTKIKK-SKMRGVPSNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ EL + + I LP DA G + YL + D IID+S+TPNR D + + Sbjct: 120 CALDELGFDEKLVPKEVADGIFILPDDATPGDPVFSYLGMDDEIIDMSVTPNRGDMLSMN 179 Query: 173 GIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A +L A + K+ + ++++ + + + D D + K M +K V Sbjct: 180 GTAHELAAIYDQQPTMPKVDLYEDATTVAADDLHVAVAADEHDVPMYK---MRLIKNVTI 236 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ R+ G+R I+ +VD TNY+ + G P H FD +++D + VR A +GE Sbjct: 237 KPSPLWLQIRIWNAGMRPINNVVDATNYILMQYGQPLHAFDFDQLNDGQINVRLAKAGEH 296 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD ++ +L +++I S + +AG +GG D TT + +E A++D + I ++ Sbjct: 297 LTTLDGEDRELLTSDLLICSGDQPICLAGTMGGLATEVTDQTTTIALEGAVFDAVKIRKT 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKI 404 N + +++ R+ERG+D GM + +++ G AS + I R+ +P + Sbjct: 357 AHNHDLHSEASMRYERGID-HGMTATALDAAAAMIAELGDGQVASGMVIGRDEDVQPTTV 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + + G ++ ++ I +RL F + + F V+VPS R D+ ADL+EEI Sbjct: 416 TIDLARINHVLGTELSLDTVSDIFKRLDFPTVVANETFTVTVPSRRWDIHIPADLIEEIA 475 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG D + + LP Q + L+ Q R ++++ S + + +++S ++ +S F Sbjct: 476 RLYGYDNLPAT-LPTGQPTIGK-LNETQQVIRDSRKLMESAGLTQAISYSLTTETKSKAF 533 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ L+ P+S++ + +R SL+ GLL N R + A++E V+ + + Sbjct: 534 ALHASDVTKLDFPMSSERTTLRLSLVSGLLDDLAYNNARKEHNVALYEEGRVFYS---QP 590 Query: 584 QKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++ I + I GS + W + VD F K ++ D++ + Sbjct: 591 EQVRPKEIEHIAGAITGSMVPKSWGVAEQP----VDFFQIKGIVAGYLKSLALQDAVSYV 646 Query: 642 SGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPGR+ I ++V G+ GE HP + + FE+ L ++ K Sbjct: 647 ATAEHPEMHPGRTADIYVGDQLV-GFVGEVHPTTAKAYKIRETYV-FELDLTALIALPKA 704 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 R + + + S + RD+A ++D + T+V +I K + V +FDV+ G + Sbjct: 705 RQQYQPISKFPS---ITRDVAMLIDDDVTNATVVALINKKGGAHLRHVQLFDVYNGSHVP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q T DDD+ ++++ + + A +R Sbjct: 762 AGKKSLAYTLTYQDQNATLVDDDVTTAFEKVLTALTDELGAEIR 805 >gi|256850854|ref|ZP_05556243.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260661065|ref|ZP_05861979.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 115-3-CHN] gi|282934475|ref|ZP_06339730.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|297205728|ref|ZP_06923123.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] gi|256615916|gb|EEU21104.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 27-2-CHN] gi|260548002|gb|EEX23978.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 115-3-CHN] gi|281301422|gb|EFA93711.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus jensenii 208-1] gi|297148854|gb|EFH29152.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] Length = 802 Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 235/821 (28%), Positives = 406/821 (49%), Gaps = 37/821 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WL+D L D+ ++ + +T G+E+ VD+ E L + VL E +PD D Sbjct: 1 MLVSYKWLQDFLKLDIDPNELAEKITRTGIEIASVDHPMEGLKKIVVGHVLECEMHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + IQVVCGAPNV G + A G+ I N I KIRG+ S GM+ Sbjct: 61 HLHITQVDVGEDEPIQVVCGAPNVAAGEYVIVALHGARIAGNEKI-KRGKIRGVVSNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C +E+ SD + I P G + + L + D I+D +TPNR+D + + Sbjct: 120 CGLQEIGFSDSVVPQEFADGIFVFPEAIKPGTDVYEALGMDDYILDFDITPNRADTLSME 179 Query: 173 GIALDLVAAGLGK--LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G A ++ A K ++++ + S + L + D L F M V V+ + Sbjct: 180 GAAYEVGAIVDQKPNIEDVALKGDGSDWTNELSVSVD---KKLAPKFLMRKVSNVKIAPS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W++ RL G+R I+ +VD TNYV L G P H +DAS S VR A GEK+ L Sbjct: 237 PLWLQTRLWNAGIRPINNVVDATNYVMLLTGQPMHAYDASAFSGKCEVRLAKKGEKLTLL 296 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 + E +L+ +++VI + ++AG++GG ++ D+TTDV++E A++DP + ++ Sbjct: 297 NENELELNSEDIVITDGTKPVALAGVMGGLNSEVTDSTTDVILESAVFDPALVRKAALRH 356 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-S 409 ++S RFE+G++ L L+ + GT ++ I KP+ + N + Sbjct: 357 DARSESSARFEKGLNWDNTEKALNMAALLLRNHAEGTVNEGIIYAQNEEKPKCEITANFA 416 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 ++ G ++ E+ L I RL F D+ V+VP+ R D+ KADLVEE+ RIYG Sbjct: 417 YFNKILGTELSNEEILTIFNRLNFVTKSAGDEVTVTVPNRRWDISIKADLVEEVGRIYGY 476 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-GGGQ 528 D IKS L Q N + + R+++ ++ ++ ++E +N+S S++ + LF Sbjct: 477 DNIKSTQPVLGQTHGGYNAD--EIKVRHLRHLVEAQGLVETINYSLTSEDLAYLFRDKAL 534 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKY 586 +++ P+++ + MR +L+ L++ N R + IFE VY END + Sbjct: 535 APVKVEWPLNSARTTMRQNLMASLVETASYNFARKQNEVRIFEQGRVYDHENDEYNEHTH 594 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV-SLDSLRFESGAP 645 +AA S +E W E+ VD + K ++ + + S + +++ Sbjct: 595 LAALY---SGTVEEVN--WQHIEEK----VDFYYVKGQVETLFDAVIKSPAKIEYKAINL 645 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHP--NILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HP R+ I + + V G+ G+ P N+ D + G+E+ LD I TK Sbjct: 646 PGMHPTRTAGIYINDQYV-GFVGQIAPLLNLFDKNLRGKELYGYELNLDLILPLMDGETK 704 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 + S V+RD++ +V +++ + + N+I+ N + + + V DV+QGK + GK Sbjct: 705 SMPAPKYPS---VERDMSLLVAENVTSDEVANVIRENAGKYLVKLDVIDVYQGKHIEAGK 761 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A ++ K+T D+ + ++ + E + + +R Sbjct: 762 KSLAYKLTFLNEKETLTDEVVTKAVNAVSEALTSQLEVEVR 802 >gi|167463949|ref|ZP_02329038.1| phenylalanyl-tRNA synthetase subunit beta [Paenibacillus larvae subsp. larvae BRL-230010] Length = 606 Score = 297 bits (760), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 203/601 (33%), Positives = 329/601 (54%), Gaps = 34/601 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV-ERNPDL 58 MK + WL ++LD T + E++ + T G+EV+ V+NR +V + E++PD Sbjct: 1 MKVSYKWLSEYLDVTGYTAEELAEKYTRSGVEVDIVENRNLGVSGVVVGYVKTKEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + +D G+ +++Q+VCGA NV G A G+ +P + + K+RG+ES GM Sbjct: 61 DKLNLCTVDAGQGEDLQIVCGAKNVDAGEKVPVALIGAQLP-GGLKIKRAKLRGVESQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +EL L+D I+ LP + VG + D L+L D ++++ LTPNRSDC+ + Sbjct: 120 ICSARELGLNDKLLPKEIQEGILVLPENLEVGRSILDVLDLDDKVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGK-LKEINISCPLSS--------ESIPLEIKFDLDDSSLCKGFAMCCV 222 G A ++ A LGK +KE ++ L+S E+I +EI C +A + Sbjct: 180 LGAAYEM-GAILGKPVKEPDVEASLASRKGMTKAEETISVEITA----REQCSHYAARLI 234 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 +GV + +P W++ RL A G+R I+ +VD+TNYV L+ G P H FDA ++++ L VR A Sbjct: 235 EGVTISASPLWLKNRLMAAGIRPINNIVDVTNYVMLEYGQPLHAFDADQLTNGHLDVRLA 294 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE I++LD+ E L PD +VI + +IAG++GG ++ + T +L+E A + Sbjct: 295 REGETIVSLDDVERKLQPDMLVITDGTKPVAIAGVMGGTNSEVTEGTARILLESARFSGS 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYK 400 ++ ++ + LG+ ++S RFE+ V+ +G+IP L SLI L GG A I R + Sbjct: 355 SVRKTSRQLGLRSESSLRFEKEVNPEGVIPALNRAASLIAELSGGKIAEGIVETRVSEPE 414 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADL 459 P I ++V G ++ ED R+L+RL F+ D V VPS R+D+ DL Sbjct: 415 PVHIELSINKVNAYLGTELVKEDMNRVLDRLHFTYEESGADSVLVHVPSRRRDISRDVDL 474 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 +EE+ R+YG D I + ++ V +L+ Q R ++ L + EV+ ++F + Sbjct: 475 IEEVARLYGYDSIPT--TLMSGVTTPGSLTDDQRIRRAIRNELTQTGLHEVITYTFTHLQ 532 Query: 520 Q----SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 Q VLF + + + P+S + S +RTSLLP LL+ N +R I D +IFE+ Sbjct: 533 QMNTLPVLFPDA-KPVSLAMPMSEERSILRTSLLPQLLEVAAYNRNRNIEDVSIFEIGSA 591 Query: 576 Y 576 + Sbjct: 592 F 592 >gi|309792577|ref|ZP_07687039.1| phenylalanyl-tRNA synthetase, beta subunit [Oscillochloris trichoides DG6] gi|308225391|gb|EFO79157.1| phenylalanyl-tRNA synthetase, beta subunit [Oscillochloris trichoides DG6] Length = 857 Score = 296 bits (759), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 257/881 (29%), Positives = 436/881 (49%), Gaps = 107/881 (12%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE--------ALSPFTIV--KVLSVER 54 +SWL++ + + +E++ LT G+EV VD R P IV +L V+ Sbjct: 1 MSWLREFVAITMPVEELAQRLTLSGMEV--VDIRYIGLEGSELPWDPEKIVVGNILEVKP 58 Query: 55 NPDLDCAILR-IDTGKHQEIQVVCGAPNV-------RVG--LLGVWAPPGSCIPENN--- 101 +P+ + +L +D G + VV GAPN+ R+ L V+A GS + + + Sbjct: 59 HPNAERLVLADVDYGAAEPHTVVTGAPNLFPYRGQGRLSHPLKAVYAKEGSRLYDGHAEG 118 Query: 102 ---MIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIID 158 + R +RG+ S M+CSEKEL +S++ I+ L DAPVG L D L + +++ Sbjct: 119 WVITTLKGRPVRGVMSDAMLCSEKELGISEEHDGIIILEDDAPVGVPLRDLL--GEVVLE 176 Query: 159 VSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLD--DSSLCK 215 + TPN + C+ + G+A + VAA G E+ + P + +E PLE + ++ + LC Sbjct: 177 LDFTPNYARCLSIVGMARE-VAAITGA--ELTLPDPQVLAEGAPLEGRTGVEIVEPDLCP 233 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD- 274 F + ++GV+ +P WM++RL G+R IS +VDI+NYV L+ G P+H FD +++ + Sbjct: 234 RFTLGLIEGVQVGPSPQWMQRRLSYAGMRPISNIVDISNYVMLEWGQPTHAFDYAKVQNG 293 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDN---------VVIASDGRIQSIAGIIGGKHAGCD 325 L VR A GE + LD +E L+P +V + G + ++AG++GG+ + Sbjct: 294 QLIVRSAQPGECLKTLDGKERSLTPGAESGLSHAPLMVCDATGPL-AVAGVMGGESSEVS 352 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 + T+ VL+E A+W+P+ I ++ + L + +++ RFERGVD + + L+ G Sbjct: 353 EGTSAVLLEAAIWEPVQIRKTARALKLPSEASRRFERGVDYNLPLLAQHRALELMRLYAG 412 Query: 386 GT-ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF-------SVIG 437 GT A A ++ + +EV R+ GI + + IL RLGF S +G Sbjct: 413 GTVARGFVDAYPRPWQTISLDLTPAEVARIVGIHLTAREIADILIRLGFTCELFGGSGLG 472 Query: 438 EYDKF------EVSVPSWRQDVEEKADLVEEILRIYGVDQIK----SEPLPLTQVEDKRN 487 ++ + V+VPS+R DV+ ADL EE+ RIYG D+I ++ LP++ ED + Sbjct: 473 DFATYVHEPTVRVTVPSFRLDVQILADLCEEVARIYGYDRIPETCIADALPIS--EDHKE 530 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRE--LEILNPISADMSN 543 L L+ V+ V+ + E++ S I+ +V Q E +++ NP + + + Sbjct: 531 LRLEHK----VRDVMVGCGLDELITHSLIAMPLVAAVNPSAAQAEQYVKLANPNTPERTY 586 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEG- 600 MR SLLP L +A N+ R A+FEV+ VY E Q ++ A R+ + G Sbjct: 587 MRRSLLPSLGEALTNNL-RERERVAVFEVARVYLKPEQVGEEQGWLPAEPRRLGIALAGP 645 Query: 601 -SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP----SWYHPGRSGI 655 W E F DL K ++E + +R+ AP +HPGRS + Sbjct: 646 REAEGWRATQREPMGFYDL---KGVVEVLVERLGLSERVRY---APLTDDERFHPGRSAV 699 Query: 656 I----------KTSAEI-VLGYFGEFHPNILDFFGLSNPICGF-EVYLDSIPISQKKRTK 703 + KT+A V+G GE HP + + +S P E+ LD++ + K Sbjct: 700 LVLETKADKKSKTAASTQVVGVLGELHPAVRERLEISLPRAAMAEIDLDTLFATSDKAHF 759 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 T +S + +DL+ + T+ +I + L++ +T+FDV+ G +GEGK Sbjct: 760 TS----ISRFPAIVQDLSITAPVEVAEATVATLIRRGAGDLLESLTLFDVYSGPQVGEGK 815 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +S+ + + T DD + + +I+ + ++ A +R Sbjct: 816 RSLTYHLAFRAADRTLTDDALVKVRKKIIGGLEREIGATIR 856 >gi|291531866|emb|CBK97451.1| phenylalanyl-tRNA synthetase beta subunit [Eubacterium siraeum 70/3] Length = 791 Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 229/817 (28%), Positives = 396/817 (48%), Gaps = 61/817 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAI 62 + WL D++ D+ +++ +T G +VE + ++ + KVL +ER+PD + I Sbjct: 1 MRWLNDYVKADMPIKEFVADMTMSGSKVETYHKMSDPINNVVVAKVLKLERHPDSEKLWI 60 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 ++D G+ + +Q+V A N+ G + S I + I K+RG+ S GMMCS Sbjct: 61 CQLDAGRDEPVQIVTAAQNLFEGAIVPACMHNSTIADGTKITK-GKLRGVASNGMMCSYA 119 Query: 123 ELMLSDDSA-------SIMELPIDAPV-----GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 EL L+ D I+ L D V G + + L+ D I++ +T NR DC+ Sbjct: 120 ELGLTKDDFDYPVADDGILILNNDPDVDSFRMGMDICEALQTDDTIVEFEITNNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A + A + S I EI ++++ LC + VK V+ + Sbjct: 180 VLGLAQEASATFDIPMNYTEPSFKGVDGDITKEISVSVENTKLCSRYMAALVKNVKIGPS 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P WM +RL+A G+R I+ LVDITN+V L+ G+P H FD + D + VR A GE + Sbjct: 240 PKWMARRLRASGVRPINNLVDITNFVMLEYGHPMHAFDLRYVEDNRIVVRNAKEGETLKL 299 Query: 290 LDN--QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD + L+P+ ++IA + +IAG++GG+H+G ++TT V+ E A +D +++ R+ Sbjct: 300 LDEMAEPVKLTPEMLIIADGKKPIAIAGVMGGEHSGIMEDTTTVVFEAACFDGVSVRRTA 359 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVF 406 + +G T++ RFE+G++ LK + LI L CG + I + Y P ++ Sbjct: 360 RKIGERTEASSRFEKGLNPVNAEKALKRALQLIEMLGCGEVVNTIIDENHSEYVPERLKH 419 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ + + IL++LGF Y+ E+ VP R D+ D+ EE+ RI Sbjct: 420 DYKWVNEHLGSDISENEQIEILKKLGFG----YENGEIIVPPTRIDMHRACDVAEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-- 524 YG ++I S +P + KR + +Q V + + EV+ +SFIS + L Sbjct: 476 YGYNRIPST-IPKLSSQGKR--TPEQIFEDKVISLALALGFYEVMTYSFISPKDYELLRM 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ + + P+ D S MRTS L +++ RN + FE++ Y P G Sbjct: 533 DEKSRKSVVLRRPLGEDTSVMRTSALTSMMEVVRRNWSNRNLEGRFFEIAREY---FPTG 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--E 641 + + + G+G D F AK A V+ + L ++ + E Sbjct: 590 ENQLPVERDVLCYALYGNGE-------------DFFTAKGVAEEVMAK-LGLKNVVYTAE 635 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD--SIPISQK 699 P+ +HPGR + + E++ GY G+ HP FG++ EVY S+ + Sbjct: 636 KNNPT-FHPGRCANVTVNGELI-GYVGQLHPEPAANFGVNT-----EVYCATLSMEVMFN 688 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLG 759 K L RDL+ + ++ +P+G +V +I+ + ++ V +FD+++G+ + Sbjct: 689 NANGDVKYTALPKFPSTYRDLSLVCNEDVPSGDIVAVIEKTAKHLEAVRLFDMYKGEQVP 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 G KS++ +++++ T DD+ D +V V+K Sbjct: 749 AGMKSLSYKLILRKKDATLTDDE----ADAVVAKVLK 781 >gi|167749281|ref|ZP_02421408.1| hypothetical protein EUBSIR_00232 [Eubacterium siraeum DSM 15702] gi|167657726|gb|EDS01856.1| hypothetical protein EUBSIR_00232 [Eubacterium siraeum DSM 15702] Length = 791 Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 229/817 (28%), Positives = 396/817 (48%), Gaps = 61/817 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAI 62 + WL D++ D+ +++ +T G +VE + ++ + KVL +ER+PD + I Sbjct: 1 MRWLNDYVKADMPIKEFVADMTMSGSKVETYHKMSDPINNVVVAKVLKLERHPDSEKLWI 60 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 ++D G+ + +Q+V A N+ G + S I + I K+RG+ S GMMCS Sbjct: 61 CQLDAGREEPVQIVTAAQNLFEGAIVPACMHNSTIADGTKITK-GKLRGVASNGMMCSYA 119 Query: 123 ELMLSDDSA-------SIMELPIDAPV-----GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 EL L+ D I+ L D V G + + L+ D I++ +T NR DC+ Sbjct: 120 ELGLTKDDFDYPVADDGILILNNDPDVDSFRMGMDICEALQTDDTIVEFEITNNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V G+A + A + S I EI ++++ LC + VK V+ + Sbjct: 180 VLGLAQEASATFDIPMNYTEPSFKGVDGDITKEISVSVENTKLCSRYMAALVKNVKIGPS 239 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILA 289 P WM +RL+A G+R I+ LVDITN+V L+ G+P H FD + D + VR A GE + Sbjct: 240 PKWMARRLRASGVRPINNLVDITNFVMLEYGHPMHAFDLRYVEDNRIVVRNAKEGETLKL 299 Query: 290 LDN--QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD + L+P+ ++IA + +IAG++GG+H+G ++TT V+ E A +D +++ R+ Sbjct: 300 LDEMAEPVKLTPEMLIIADGKKPIAIAGVMGGEHSGIMEDTTTVVFEAACFDGVSVRRTA 359 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVF 406 + +G T++ RFE+G++ LK + LI L CG + I + Y P ++ Sbjct: 360 RKIGERTEASSRFEKGLNPVNAEKALKRALQLIEMLGCGEVVNTIIDENHSEYVPERLKH 419 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G D+ + + IL++LGF Y+ E+ VP R D+ D+ EE+ RI Sbjct: 420 DYKWVNEHLGSDISENEQIEILKKLGFG----YENGEIIVPPTRIDMHRACDVAEEVARI 475 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-- 524 YG ++I S +P + KR + +Q V + + EV+ +SFIS + L Sbjct: 476 YGYNRIPS-TIPKLSSQGKR--TPEQIFEDKVISLALALGFYEVMTYSFISPKDYELLRM 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ + + P+ D S MRTS L +++ RN + FE++ Y P G Sbjct: 533 DEKSRKSVVLRRPLGEDTSVMRTSALTSMMEVVRRNWSNRNLEGRFFEIAREY---FPTG 589 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--E 641 + + + G+G D F AK A V+ + L ++ + E Sbjct: 590 ENQLPVERDVLCYALYGNGE-------------DFFTAKGVAEEVMAK-LGLKNVVYTAE 635 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD--SIPISQK 699 P+ +HPGR + + E++ GY G+ HP FG++ EVY S+ + Sbjct: 636 KNNPT-FHPGRCAKVTVNGELI-GYVGQLHPEAAANFGVNA-----EVYCATLSMEVMFN 688 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLG 759 K L RDL+ + ++ +P+G +V +I+ + ++ V +FD+++G+ + Sbjct: 689 NADGDVKYTALPKFPSTYRDLSLVCNEDVPSGDIVAVIEKTAKHLEAVRLFDMYKGEQVP 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 G KS++ +++++ T DD+ D +V V+K Sbjct: 749 AGMKSLSYKLILRKKDATLTDDE----ADAVVAKVLK 781 >gi|227432579|ref|ZP_03914559.1| phenylalanyl-tRNA synthetase beta subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351662|gb|EEJ41908.1| phenylalanyl-tRNA synthetase beta subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 818 Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 237/842 (28%), Positives = 416/842 (49%), Gaps = 63/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVER 54 MK +L+W+ ++LD + L + + D + ++D+ ++ + K+LSV Sbjct: 1 MKTSLTWINEYLDNAIDLHPKSVSDLAEKVERTSVEIDSNTTIASGQNGLVVAKILSVIP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIV--NVRKI 109 +PD D I +++ G+ + IQ+V GAPNV G + + A G+ I EN ++ N K+ Sbjct: 61 HPDSDHMVITQVEAGEPEPIQIVTGAPNVAEGQMVILAKVGAHIINRENGDLIELNAVKL 120 Query: 110 RGIESTGMMCSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSL 161 RG S GM+ + +E+ SD A + D G L + +P++D L Sbjct: 121 RGEFSYGMLVALQEIGFSDKIAPKAFEAGIYVFNETDDVKPGDDALVALGMDEPVLDTDL 180 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCK 215 TPNR+D + + G A + G + ++ P S E + E + +DD L Sbjct: 181 TPNRADMLSMIGTAYEF-----GAMLNKPVTLP-SFELVEYEQTADSQVSVQIDDQELVS 234 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--S 273 +A+ V V +P W+++RL G+R I+ +VDITNY+ L G P H FD ++ S Sbjct: 235 KYALRVVNNVTIKDSPLWLQKRLWNAGMRPINNIVDITNYMMLTYGQPIHAFDLDKLNGS 294 Query: 274 DVLTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 D+ VRRA GEK++ LD +E L S +++VIA + +AG++GG + D+NT +++ Sbjct: 295 DIY-VRRAKDGEKLVTLDGEERSLRSGEDIVIADESEGLMLAGVMGGMGSEIDNNTKNIV 353 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDI 391 +E A+++P + + + + +++ RFERG++ I L H SL+ L G A Sbjct: 354 IESAIFNPSLVRATARRHNLHSEASSRFERGLNWDETINALDHAASLVDELADGQVARGQ 413 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 IA + K ++ V + G + ++ I ++L F +K V VP+ R Sbjct: 414 IIAADDVRKDIRLSLSTQRVNNILGTSLEKDEIANIFDKLNFVYEKNDEKIVVDVPARRA 473 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ +ADL+EE+ R+YG D + LP + LS +Q + R + ++ S + + + Sbjct: 474 DISIEADLIEEVARLYGYDNLPV-TLPYGPTTSGK-LSREQRQIRASRHIMESLGLNQAI 531 Query: 512 NWSFISKEQSVLFGGGQRE-LEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 ++ + E++ LF + + + LN P+S+D + R +LL GLL NV + + A+ Sbjct: 532 SYVLTTSEKAQLFAENKADGIVTLNYPMSSDRTTARQNLLAGLLDDVSYNVSHFVPNVAL 591 Query: 570 FEVSHVYENDTPEGQKY---MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +E V+ + P Q AG+ G+ ++ S W + EE+ VD +D K Sbjct: 592 YEQGRVFIANEPNEQPKEIERIAGVVTGN--LQKSS--WQESKEEKA--VDFYDIKG--- 642 Query: 627 SVIEPF---VSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 ++E + + +D++R+ + HPG++ I + V G+ G+ HP I L+ Sbjct: 643 -IVENYLDQIGVDNVRYIATERHESMHPGQTADIYIGEQYV-GFVGQIHPKITKKQKLA- 699 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVD 741 P+ GFE+ L ++ T + + +S + RD A +VDQ + I++ Sbjct: 700 PVFGFELNLFTV---FNHVTDSIQFNPISRFPQISRDAALLVDQATTNSEISATIVETAG 756 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + DVT+FDV+ G +L E KKS+A + Q T + DI + I+ + K N Sbjct: 757 EHLVDVTLFDVYTGNNLPESKKSLAYTLTYQDSDGTLLETDINSDFEHIMSELQSKFNVE 816 Query: 802 LR 803 +R Sbjct: 817 IR 818 >gi|313886517|ref|ZP_07820233.1| phenylalanine--tRNA ligase, beta subunit [Porphyromonas asaccharolytica PR426713P-I] gi|312924063|gb|EFR34856.1| phenylalanine--tRNA ligase, beta subunit [Porphyromonas asaccharolytica PR426713P-I] Length = 829 Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 250/853 (29%), Positives = 418/853 (49%), Gaps = 74/853 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVER 54 M + +WL+ +L + ++ +TLT+IGLEV V+ E+ L I + L+ Sbjct: 1 MNISFNWLQQYLPRLEGYNPNEVAETLTAIGLEVAGVEQTESVRGGLRGVVIGRTLTCTP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMI-VNVRKIR 110 +P+ D + +D G+ + +Q+VCGAPNV G + A G+ + P+ + K+R Sbjct: 61 HPNSDHLHVCTVDLGEEEPVQIVCGAPNVAAGQTVIVATVGTTLYGPDGESFKIKKSKLR 120 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDA-PVGGRLSDYLEL-SDPIIDVSLTPNRSDC 168 G S GM+CS+ E+ + DS+ I L + G +DY +L SD +I++ +TPNR D Sbjct: 121 GEPSMGMICSQVEIGMGADSSGIWVLDDETVKPGTPAADYFDLASDTVIEIDITPNRVDA 180 Query: 169 IGVRGIALDLVA------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCC 221 G+A DL A + + + ++ P S ++ I+ +++ S+ C + Sbjct: 181 TSHYGVARDLAAYYSYREGQVIRAERPTLTKPQSVDARASAIQVEMEVSAEDCPRYQGVT 240 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRR 280 ++G++ +P+W+++RL+++G R I+A+VD+TN+V + G P H FDA +I+ L + Sbjct: 241 IRGLKCVESPDWLKERLQSIGQRPINAVVDVTNFVLHEIGQPLHAFDAQKIAGGQLRIAH 300 Query: 281 ACSGEKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 +G LD E+ L+ +N++ S I G++GG +G TTD+ +E A ++ Sbjct: 301 LPAGTPFTTLDGVEHKLTGMENMICDSQLTPLCIGGVMGGLDSGVTMETTDIFIEAANFN 360 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNIT 398 P R+ ++ G+ TDS +RFERG+D + L+ VSLIL +CGG A + + Sbjct: 361 PTITRRAARSHGLSTDSSFRFERGLDPEATDWALQRAVSLILEICGGKLAEETVDHYRMH 420 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKA 457 P ++ V R G ++ + ILE L S E D F +SVP +R DV Sbjct: 421 LDPVELTISTDYVSRAIGRELTADQLQLILEALEMSPKAVEGDAFAISVPRYRYDVTRPV 480 Query: 458 DLVEEILRIYGVDQIKSEPL------PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+VEE+LRIYG + + PL L++ D+ ++ Q + + +L E++ Sbjct: 481 DVVEEVLRIYGYNAV---PLSGYVHASLSKQSDQDHIYHAQLK---LSELLTGFGYREIL 534 Query: 512 NWSFISKEQSVLFGGGQRELE------ILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 N S S++ + GQ+ + I NP+S +++ +R +LL G L+ NV R Sbjct: 535 NNSLTSRQ----YFEGQKAFDPNQLVPIENPLSQELNVLRPTLLVGGLETISDNVHRKQP 590 Query: 566 DFAIFEVSHVY---END---TPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCRF 615 A++E +VY +ND TP Q A + G+ SG L W+ E + Sbjct: 591 YCALYEWGNVYRYKQNDLAATPLDQYTQAHRL-----GLWLSGTLMPNSWTSAGEATSPY 645 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-KTSAE-IVLGYFGEFHPN 673 + + L F + D + P+ H S ++ T E L Y G Sbjct: 646 --MLRGVVEKLLAHMGFTTED---YSVTTPAECHDLWSDVVCYTDREGKSLAYVGVVSNY 700 Query: 674 ILDFFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 L + P+ E+Y D++ + Q K T+ LS VKRDLA ++D I Sbjct: 701 WLTKCDIKQPVYYAELYSDTLMAHLLQHKVVSTE----LSKYPTVKRDLALLIDNDISYE 756 Query: 732 TLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 L +R L+ + +FDV+ GK L +GKKS A+ ++ K T RD I M RI Sbjct: 757 ALARTASKAERKLLRRIELFDVYTGKELPKGKKSYALSFYLRDDKGTLRDAQIDAAMKRI 816 Query: 791 VENVVKKTNAVLR 803 + + ++ +A LR Sbjct: 817 WQAIEQEYHATLR 829 >gi|312130617|ref|YP_003997957.1| phenylalanyl-tRNA synthetase beta subunit [Leadbetterella byssophila DSM 17132] gi|311907163|gb|ADQ17604.1| phenylalanyl-tRNA synthetase beta subunit [Leadbetterella byssophila DSM 17132] Length = 800 Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 242/830 (29%), Positives = 400/830 (48%), Gaps = 58/830 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + LK + + S E++ LTS GLEVE ++ + L I KVLS E++PD D Sbjct: 1 MKISYKSLKKFISFEHSPEELGRLLTSTGLEVEGIEEIKGTLDGLVIGKVLSCEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG-SCIPENNMIVNVRK--IRGIEST 115 + R+D G + + +VCGAPNV G + AP G + P ++K IRG S Sbjct: 61 KLKLTRVDVGGEEILDIVCGAPNVAEGQKVIVAPVGVTLYPTEGEPFTIKKSKIRGASSN 120 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGVRGI 174 GM+C+E E+ L ++ L D G ++ Y + D +I++ LTPNR+D G+ Sbjct: 121 GMLCAEDEIGLGKSHDGLLILDTDLAPGTPVAQYFKKEGDHVIEIGLTPNRADAASHFGV 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 A D+ A L+ ++S S S +I ++ + C F ++GV +P W+ Sbjct: 181 ARDIKAVTGLDLQLPDVSG-FSLGSAEPKIDLEVIATEACPRFCGLEIQGVSVKESPEWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 ++ L+AVGL I+ +VDI+NY+ G P H+FDA I + VR+ +G +I+ LD Sbjct: 240 QEFLRAVGLNPINNIVDISNYICHFLGQPMHIFDADEIRGGKVVVRKPEAGTEIITLDGV 299 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 ++ I +IAG+ GG+ +G T + +EVA +DP +I + G+ Sbjct: 300 SRKFRGQDLAICDAEGPMAIAGVFGGQKSGVKAETKHIFLEVAYFDPAHIRSTASYFGLK 359 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK- 412 TD+ +R+ERG D +K L+ L GG ++++ P I +VK Sbjct: 360 TDASFRYERGTDPNMPPYAIKLAALLVQELAGGQ----IVSKSFDNYPTPISNFEFDVKV 415 Query: 413 ----RLSGIDVPIEDSLRILERLGFSVIGEYDKFE----VSVPSWRQDVEEKADLVEEIL 464 RL G + I ILERL IG DK E VSVP +R DV +AD+VEE+L Sbjct: 416 RNIDRLIGKALGIGKIKEILERLD---IGVQDKGEGVLAVSVPPYRVDVNREADIVEEVL 472 Query: 465 RIYGVDQIK-SEPLPLTQVED---KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 RIYG D ++ S+ L + + D K L+ S T LA+ E+ S ++ ++ Sbjct: 473 RIYGFDNVELSDHLSASYLSDFPVKEEEGLRISLT----ATLAAMGFNEIQCLSIVNPKE 528 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + G + +++LNP+S ++S MR SLL L N++R D +FE VY+ +T Sbjct: 529 NAWTGDPESSVKLLNPLSEELSEMRQSLLFSALNTAVYNINRRNRDLKVFEFGRVYKRNT 588 Query: 581 PEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +G +K M + + G + E W+ K + + A+ + ++ + Sbjct: 589 -QGKVKEKKMLSLLLTGKTSAES----WALKGDNTA-----YRHLHQAVQQVLKWMKVRQ 638 Query: 638 LRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 E+ +P++ + G+ T VL FG+ ++L L E Y Sbjct: 639 FEGQETASPTFAY----GLDYTVNGKVLVSFGKVKADLLKKADLKQ-----EAYYAEFDW 689 Query: 697 SQKKRTKTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 + + V +S V+RDL+ ++D+ + + I + +L+ V VFDV+ Sbjct: 690 EYLMQQYSTDFVFKEISKFPEVRRDLSLVLDEEVSFNKIQKIAYQTEKKLLKQVNVFDVY 749 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +G L E +KS ++ ++Q + T D I M R++ ++ A++R Sbjct: 750 KGDKLAENQKSYSVSFILQDQEKTLTDQQIDKTMQRLMGAFEREVGAIIR 799 >gi|227877750|ref|ZP_03995784.1| phenylalanine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256850079|ref|ZP_05555509.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262047367|ref|ZP_06020324.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|227862653|gb|EEJ70138.1| phenylalanine--tRNA ligase [Lactobacillus crispatus JV-V01] gi|256713051|gb|EEU28042.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260572341|gb|EEX28904.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] Length = 806 Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 230/814 (28%), Positives = 403/814 (49%), Gaps = 43/814 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD LD D ++ + +T G+E+ ++V + L + +VL E Sbjct: 1 MLVSYNWLKDFLDLDGQDPYELAEEITRSGVEIPDRVHPMDGLKKLVVGRVLDCEGVEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+ Sbjct: 61 HLHLTHVDVGEDEPLQIVCGAPNVAAGEDVIVALHGARIAGNEKIKK-GKIRGMESYGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +E+ SD I P DA V G + + L + D I++ +TPNR+D +G Sbjct: 120 CGLQEIGFSDSVVPQEFVDGIYVFPADAEVKPGQDVYEALGMDDYILNFDITPNRADTLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + ++ L + D+ D L F + ++ V+ Sbjct: 180 MEGAAYE-VGAIINQKPKVEEKVVLKEDGPAWTDSLDVKVDEKLAPKFYLRKLENVKIQD 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 239 SPLWLQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P +++I + +AG++GG + TTDV++E A++DP + ++ Sbjct: 299 LLNEKEVDLDPKDIIITDGKKPVMMAGVMGGLDSEITSETTDVILESAIFDPTLVRKAAL 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + +P + Sbjct: 359 RHANRTEASSRYEKGVNWDATEKAINMAALLLRNDADATVDEGILKATDQKREPVVVKTT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + ++ G + +++ ++I +RL F V + D V VP+ R D+ ADLVEE+ R+Y Sbjct: 419 ASYLNKVLGTKLSVDEIVKIFDRLCFKVDVDGDNLAVHVPNRRWDISIPADLVEEVGRLY 478 Query: 468 GVDQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G D ++S +P LP T S ++ R +K ++ + +ME +++S S E++V + Sbjct: 479 GYDNLESTQPVLPETH----GGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYT 534 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 +EL E+ +P+++ S MR +L+ GL+ A N R A+FE Y++D + Sbjct: 535 KDPKELVEVKSPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRTYDHDGGKFN 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 +++AA SG +++ + + VD + K ++ + + + +E Sbjct: 595 EHEHLAAIY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFNAIGIGPEKVVYE 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HP-NILDFFGLSNPICGFEVYLDS-IPISQ 698 + HP R+ I + V G G H I D + + G+E+ LD+ IP+ Sbjct: 646 AKGIKGMHPTRTAGIYIDKQYV-GMIGMIAHAVTIADKALRGSELYGYEIDLDTIIPM-- 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK V ++RDL+ +VD+ + + N+IK N + + ++ V DV+ G Sbjct: 703 --LTKGVTAVPAPKFPAIQRDLSLLVDKPVTNQEIENVIKSNAGKYLTELKVIDVYAGAH 760 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + GKKS+A + KDT DD + MD+IV Sbjct: 761 IDVGKKSIAYNLTFLNRKDTLTDDVVNNAMDKIV 794 >gi|296164548|ref|ZP_06847119.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900148|gb|EFG79583.1| phenylalanyl-tRNA synthetase beta subunit [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 827 Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 240/820 (29%), Positives = 397/820 (48%), Gaps = 87/820 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + D V+ + + L IG EVE+V + P T+ +V S+E Sbjct: 1 MRIPYSWLREVVNVGAPDWHVAPDDLEQALIRIGHEVEEVVTLGPVEGPLTVGRVSSIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C R+D G ++ +VCGA N G L V A PG+ +P + RK Sbjct: 61 LTGFKKPIRAC---RVDVGAGEDRDIVCGATNFAAGDLVVVALPGTTLP-GGFAIAARKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 G +S GM+CS EL L D + I+ LP G + L L D + +++TP+R + Sbjct: 117 YGRDSDGMICSAAELGLGADHSGILVLPPGTAEPGAGAAVLGLDDVVFHLAITPDRGYGM 176 Query: 170 GVRGIALDLVAA-GLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-R 226 VRG+A ++ A L + + P++ E+ PL ++ + + + FA+ V G+ Sbjct: 177 SVRGLAREIACAYDLDFVDPAEVKPLPVAGEAWPLTVQPE----TGVRRFALRPVTGIDP 232 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 V+P W+++RL G+R+ S VD+TNYV L+ G+P H D +RIS L VR A GE Sbjct: 233 AAVSPWWLQRRLLLAGIRATSPAVDVTNYVMLELGHPMHAHDCNRISGGLAVRFARPGET 292 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ++ LD+ E L +V+I D +I G++G ++TDVL+E A+WDP ++R+ Sbjct: 293 VVTLDDIERRLDAADVLIVDDRATAAIGGVMGAASTEVRADSTDVLLEAAVWDPAAVSRT 352 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYKP 401 + L + +++ R+ERGVD + L +L++ + GG S+ N + Sbjct: 353 QRRLHLPSEAARRYERGVDPAVSVAALDRCATLLVDIAGGAVSEKLTDWRGDPPNDDWSL 412 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 I R++G+ P + R L ++G V + D V+ PSWR D+ + ADLVE Sbjct: 413 PPIRIRADLPDRVAGVAYPPGATARRLAQIGARVSDDGDTLTVTPPSWRPDLLQPADLVE 472 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G++ I S L R L+ Q R R + LA +E++ F+ Sbjct: 473 EVLRLEGLEAIPSV---LPAAPAGRGLTAGQRRRRAIGTSLAQSGFVEILPTPFLPAGVF 529 Query: 522 VLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 L+G + +LNP+ AD ++ T+LLP LL+A RNV R + D A++ ++ V Sbjct: 530 DLWGLPADDPRRTTTRVLNPLEADRPHLATTLLPALLEALVRNVSRGLVDVALYALAQVV 589 Query: 577 E--------------------------NDTPEGQKYMA---AGIRKGSSGIEGSG-RLWS 606 + P +++A AG+R+ G G G R + Sbjct: 590 QPTEQTRGVQPIPVHRRPTDSEIALLNASLPRQPQHVAAVLAGLRE-RRGPWGPGRRAEA 648 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 + E R + A+A + V LR P +HPGR + + V+G+ Sbjct: 649 ADAFEAARII----ARASGVEV--------RLRAAQHLP--WHPGRCAEVLVG-DTVVGH 693 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G+ HP++++ GL C E+ LD+ +S V +D++ +V Sbjct: 694 AGQLHPSVVERSGLPPGTCAVELDLDA-----IPIAAALPAPMVSPFPAVFQDVSLVVPA 748 Query: 727 HIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 H+PA + + ++ L++D+ +FDVF G +GEG+KS+ Sbjct: 749 HVPAQAVADAVREGAGELLEDLQLFDVFTGPQVGEGRKSL 788 >gi|240146017|ref|ZP_04744618.1| phenylalanyl-tRNA synthetase, beta subunit [Roseburia intestinalis L1-82] gi|257201830|gb|EEV00115.1| phenylalanyl-tRNA synthetase, beta subunit [Roseburia intestinalis L1-82] Length = 805 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 255/850 (30%), Positives = 393/850 (46%), Gaps = 93/850 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M +L W+KD + D + ++ D +T G +VE +N E L I +V S+E++PD Sbjct: 1 MNTSLKWIKDLVPGLDCTPQEYMDAMTLSGSKVEGYENMDEDLDKIVIGQVKSIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPG--SCIPENNMIVNVRKI 109 D I ++D G + IQ+V GAPNV G L G G E + + K+ Sbjct: 61 DKLVICQVDIGT-ETIQIVTGAPNVTEGCKVPVVLDGGKVAGGHDGSKTEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL + D + LP DAPVG YL L D +++ +T Sbjct: 120 RGVESNGMMCSIEELGSNRDMFPLAPENGLYILPEDAPVGESAISYLGLDDTVVEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC + GIA + A + ++ ++E + IK + D LC + VK Sbjct: 180 NRVDCFSILGIAREAAATFGKEFVPPVVTETGNNEDVNDYIKVSVKDDKLCSRYTARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 +R +P WM+ RL+A G+R I+ +VDITNYV + G P H +D I D + VRRA Sbjct: 240 NIRIAPSPEWMQCRLRAQGIRPINNIVDITNYVMEEYGQPMHAYDLDTIEDREIVVRRAA 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE+ + LD QE L D+V++ DGR IAGI+GG+++ DN +L E A +D Sbjct: 300 KGEQFVTLDGQERTLD-DSVLMICDGRKAIGIAGIMGGENSMITDNVKTMLFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK- 400 NI SG+ +G+ TD+ +FE+G+D I + LI L G + K Sbjct: 359 NIRLSGRKIGLRTDASAKFEKGLDPNTAIEAMNRACQLIEELGAGEVVGGVVDVYPNAKG 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++I F + +L G D+ E L ++ YD EV VPSWRQD+E AD Sbjct: 419 DKRIPFEPEKYNKLLGTDIAKETMLAYFSKINLG----YDPASNEVIVPSWRQDLECDAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS 517 L EE+ R +G D+I P L E + R V R +A + + +SF S Sbjct: 475 LAEEVARFFGYDKI---PTTLPSGEATAGKLTFKLRIEAVAREIAEFCGFSQGMTYSFES 531 Query: 518 ---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + S L ++ + I NP+ D S MRT L G+L + N +R + Sbjct: 532 PKVYDKLLLPQDSPL----RKAVVISNPLGEDFSIMRTVSLNGMLTSLSTNFNRRNKNVR 587 Query: 569 IFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E+ ++Y P ++ EER +F D F Sbjct: 588 LYELGNIYLPKQVP-----------------------VTELPEERMQFTLGMYGEGDFFT 624 Query: 621 AKADALSVIEPFVSLDSLRF------ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 K VIE F+ ++ E+G P + HPGR + V+GY GE HP + Sbjct: 625 MKG----VIEEFLYKAGMKLKPEYDPEAGKP-FLHPGRQANVVYDG-TVIGYLGEVHPTV 678 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + + + + LD +P + K ++ RD++ +V + + AG + Sbjct: 679 AANYAIKERV--YVAVLD-MPEIVSHASFDHKYEGIAKFPAAARDISMVVPKKVLAGDIE 735 Query: 735 NII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I + + ++ +FD+++G + G KS+A + + D DI MDRIV+ Sbjct: 736 KIFDEKGGQFLEKYDLFDIYEGAQIKPGYKSIAYSLSFRAKDRNLEDADITGAMDRIVK- 794 Query: 794 VVKKTNAVLR 803 ++ A LR Sbjct: 795 ALEHVGAELR 804 >gi|254556473|ref|YP_003062890.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum JDM1] gi|308180415|ref|YP_003924543.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] gi|254045400|gb|ACT62193.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum JDM1] gi|308045906|gb|ADN98449.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus plantarum subsp. plantarum ST-III] Length = 805 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 222/824 (26%), Positives = 406/824 (49%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ + +WL+D+L D+ +++ + + +EV+ V E L + VL+ E +PD D Sbjct: 1 MRISTTWLRDYLKLDIPADELAEKIERTAVEVDGVIRPSEGLKKVVVGHVLTCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A P S I + I K+RG+ S GM+ Sbjct: 61 HLHVCQVDVGESEPLQIVCGAPNVAAGEKVIVALPNSWIGGHTKIKK-SKMRGVPSNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ EL + + I LP DA G + YL + D IID+S+TPNR D + + Sbjct: 120 CALDELGFDEKLVPKEVADGIFILPDDATPGDPVFSYLGMDDEIIDMSVTPNRGDMLSMN 179 Query: 173 GIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A +L A + K+ + ++++ + + + D D + K M +K V Sbjct: 180 GTAHELAAIYDQQPTMPKVDLHEDATTVAADDLHVAVAADEHDVPMYK---MRLIKNVTI 236 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ R+ G+R I+ +VD TNY+ + G P H FD +++D + VR A +GE Sbjct: 237 KPSPLWLQIRIWNAGMRPINNVVDATNYILMQYGQPLHAFDFDQLNDGQINVRLAKAGEH 296 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD ++ +L +++I S + +AG +GG D TT + +E A++D + I ++ Sbjct: 297 LTTLDGEDRELLTSDLLICSGDQPICLAGTMGGLATEVTDQTTTIALEGAVFDAVKIRKT 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKI 404 N + +++ R+ERG+D GM + +++ G AS + I R+ +P + Sbjct: 357 AHNHDLHSEASMRYERGID-HGMTATALDAAAAMIAELGDGQVASGMVIGRDEDVQPTTV 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + + G ++ ++ I +RL F + + F V+VPS R D+ ADL+EEI Sbjct: 416 TIDLARINHVLGTELSLDTVSDIFKRLDFPTVVANETFTVTVPSRRWDIHIPADLIEEIA 475 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG D + + LP Q + L+ Q R ++++ S + + +++S ++ +S F Sbjct: 476 RLYGYDNLPAT-LPTGQPTIGK-LNETQQVIRDSRKLMESAGLTQAISYSLTTETKSKAF 533 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ L+ P+S++ + +R SL+ GLL N R + A++E V+ + + Sbjct: 534 ALHASDVTKLDFPMSSERTTLRLSLVSGLLDDLAYNNARKEHNVALYEEGRVFYS---QP 590 Query: 584 QKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++ I + I GS + W + VD F K ++ D++ + Sbjct: 591 EQVRPKEIEHIAGAITGSMVPKSWGVAEQP----VDFFQIKGIVAGYLKSLALQDAVSYV 646 Query: 642 SGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPGR+ I ++V G+ GE HP + + FE+ L ++ K Sbjct: 647 ATAEHPEMHPGRTADIYVGDQLV-GFVGEVHPTTAKAYKIRETYV-FELDLTALIALPKA 704 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 R + + + S + RD+A ++D + T+V +I K + V +FDV+ G + Sbjct: 705 RQQYQPISKFPS---ITRDVAMLIDDDVTNATVVALINKKGGAHLRHVQLFDVYNGSHVP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q T DDD+ ++++ + + A +R Sbjct: 762 AGKKSLAYTLTYQDQNATLVDDDVTTAFEKVLTALTDELGAEIR 805 >gi|228470215|ref|ZP_04055122.1| phenylalanyl-tRNA synthetase, beta subunit [Porphyromonas uenonis 60-3] gi|228308166|gb|EEK17029.1| phenylalanyl-tRNA synthetase, beta subunit [Porphyromonas uenonis 60-3] Length = 829 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 255/866 (29%), Positives = 417/866 (48%), Gaps = 100/866 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVER 54 M + +WL+ +L + ++ +TLT+IGLEV V+ E+ L I + L+ Sbjct: 1 MNISFNWLQQYLPRLEGYNPNEVAETLTAIGLEVAGVEQTESVRGGLRGVVIGRTLTCIP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVG--------LLGVWAPPGSCIPENNMIVN 105 +P+ D + +D G+ + +Q+VCGAPNV G ++ P G + Sbjct: 61 HPNSDHLHVCTVDLGEEEPVQIVCGAPNVAAGQTVVVATVGTTLYGPDGEPFK-----IK 115 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPV--GGRLSDYLEL-SDPIIDVSLT 162 K+RG S GM+CS+ E+ + DS+ I L D V G +DY +L SD +I++ +T Sbjct: 116 KSKLRGEPSMGMICSQVEIGMGADSSGIWVLE-DETVRPGTPAADYFDLASDTVIEIDIT 174 Query: 163 PNRSDCIGVRGIALDLVA--------------AGLGKLKEINISCPLSSESIPLEIKFDL 208 PNR D G+A DL A L K + ++ P +I +E++ Sbjct: 175 PNRVDATSHYGVARDLAAYYSYREGQVIRAERPTLTKPQAVDAKAP----AIQVEMEVSA 230 Query: 209 DDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 +D C + ++G++ +P+W+++RL+++G R I+A+VD+TN+V + G P H FD Sbjct: 231 ED---CPRYQGVTIRGLKCVESPDWLKERLQSIGQRPINAVVDVTNFVLHEIGQPLHAFD 287 Query: 269 ASRISD-VLTVRRACSGEKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDD 326 A +I+ L + +G LD E+ L+ +N++ S I G++GG +G Sbjct: 288 AQKIAGGKLRIAHLPAGTPFTTLDGVEHKLTGMENMICDSQLTPLCIGGVMGGLDSGVTM 347 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 +TTD+ +E A ++P R+ ++ G+ TDS +RFERG+D + L+ VSLIL +CGG Sbjct: 348 DTTDIFIEAANFNPTITRRAARSHGLSTDSSFRFERGLDPEATDWALQRAVSLILEICGG 407 Query: 387 T-ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEV 444 T A + + P ++ V R G D+ E IL+ L S E F + Sbjct: 408 TIAGETVDHYRMHLDPVELTISTDYVSRTIGRDLTAEQLQLILDALEMSPKAVEGGAFAI 467 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL------PLTQVEDKRNLSLQQSRTRYV 498 SVP +R DV D+VEE+LRIYG + + PL L++ D+ ++ Q + + Sbjct: 468 SVPRYRYDVTRPVDVVEEVLRIYGYNAV---PLSGYVHASLSKQSDQDHIYHAQLK---L 521 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE------ILNPISADMSNMRTSLLPGL 552 +L E++N S S++ + GQ+ + I NP+S +++ +R +LL G Sbjct: 522 SELLTGFGYREILNNSLTSRQ----YFEGQKAFDLNQLVPIENPLSQELNVLRPTLLVGG 577 Query: 553 LKATGRNVDRAIADFAIFEVSHVY---END---TPEGQKYMAAGIRKGSSGIEGSGRL-- 604 L+ NV R A++E +VY +ND TP Q A + G+ SG L Sbjct: 578 LETISDNVHRKQPYCALYEWGNVYRYKQNDQATTPLDQYTQAHRL-----GLWLSGTLMP 632 Query: 605 --WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-KTSAE 661 W+ E + + + L F + D + P+ H S ++ T E Sbjct: 633 NNWTTAGEATSPY--MLRGVVEKLLAHMGFTAED---YSVTTPAECHDLWSEVVCYTDRE 687 Query: 662 -IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKR 718 L Y G L + P+ E+Y D++ + Q K T+ LS VKR Sbjct: 688 GKSLAYVGVISSYWLTKCDIKQPVYYAELYSDTLMAHLLQHKVVSTE----LSKYPTVKR 743 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 DLA ++D +I L + + +R L+ V +FDV+ GK L GKKS A+ ++ K T Sbjct: 744 DLALLIDNNITYEALASTARKAERKLLQRVELFDVYTGKELPSGKKSYALSFYLRDDKGT 803 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLR 803 RD I M RI + + ++ +A LR Sbjct: 804 LRDAQIDAAMKRIWQAIEQEYHATLR 829 >gi|305667199|ref|YP_003863486.1| phenylalanyl-tRNA synthetase subunit beta [Maribacter sp. HTCC2170] gi|88708133|gb|EAR00371.1| phenylalanyl-tRNA synthetase beta subunit [Maribacter sp. HTCC2170] Length = 808 Score = 296 bits (758), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 242/834 (29%), Positives = 394/834 (47%), Gaps = 57/834 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M + +WLK L+TD ++ + LT +GLEVE V E+ L + VL+ +++P Sbjct: 1 MNISYNWLKQFLNTDWDSKRTSELLTDLGLEVEGVTTYESVKGGLKGIVVGHVLTCDKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN---NMIVNVRKIRGI 112 + D + +D G +Q+VCGAPNV G A G+ + + + KIRG Sbjct: 61 NADRLKLTTVDIGLENPVQIVCGAPNVDKGQKVPVATIGTTLYSKEGESWTIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L G ++ EL +D + ++ LTPNR+D + Sbjct: 121 ESHGMICAEDELGLGEGHDGIMILSEILEPGTPCAEVFELENDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSE----SIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A K EI + P +S L++ ++++ L + + + Sbjct: 181 YGVARDLKAGLKQKEIEIELITPSTSHFHITDRSLKLDVSVENNDLAPRYCGVTISNLIV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +PNW+R RLKA+GL I+ +VD TNYV + G P H FDA RI + V+ G K Sbjct: 241 QQSPNWLRDRLKAIGLTPINNIVDATNYVLHEMGQPLHAFDADRILGKKVIVKTLPKGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD E +L ++++I + IAG+ GG + G +NT + +E A +DPI+I ++ Sbjct: 301 FMTLDGVERELHDEDLMICDSEKPMCIAGVFGGINTGVTENTRSIFLESAYFDPISIRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIV 405 K G+ TD+ +RFERG+D++ + LK LI + GG SDI ++ Sbjct: 361 AKRHGLNTDASFRFERGIDIENVEYSLKRAALLIKEIAGGDITSDIVDLYPKKKSDYEVF 420 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEIL 464 ++ +L G ++P + IL L V + + +PS+R DV+ + D++EEIL Sbjct: 421 LTFDKIFKLIGQEIPRDTIKSILASLEIKVKNVTETGMGLVIPSYRVDVQREVDVIEEIL 480 Query: 465 RIYGV------DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 R+YG D++ + P+++ ED + Q RT LA+R E++ S S Sbjct: 481 RVYGYNNIAFKDKLNASISPISKYEDYK----LQDRT---GDFLAARGFYEIMTNSLTSP 533 Query: 519 EQSVLFGGGQRELEI--LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS--- 573 L + E + LNP+S D+S MR S+L L+ N++R + FE Sbjct: 534 SYVELINDLKVEQSVVMLNPLSTDLSAMRQSMLLNGLETISYNINRKNQNLRFFEFGKTY 593 Query: 574 HVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 H +E+ E + + G R + W+ S++ D F K SV+E Sbjct: 594 HQFEDKRVENKHLSLLVTGNRNNTG--------WASPSKQ----TDFFFFK----SVVES 637 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + S P G+ S + + FG H ++ F + + + Sbjct: 638 ILRRLGISNFSSKPIEATLFSEGLTLVSKKKKIVDFGVIHKSLSKKFDIKQEVLFADFNW 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTV 749 D+I + K++ + +P VKRD A ++D I + + +R L+ V + Sbjct: 698 DNII---ELVPKSEIIFKSIPKYPEVKRDFALLLDNAISFKEIHDAAFQTERNLLKKVNL 754 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FDV+ G L +GKKS A+ +Q T D I +M ++ K A LR Sbjct: 755 FDVYTGNKLPKGKKSYAVSFTLQDNNSTLTDKQIDKIMSKLQNKYEKDLGAQLR 808 >gi|189220273|ref|YP_001940913.1| Phenylalanyl-tRNA synthetase beta subunit [Methylacidiphilum infernorum V4] gi|189187131|gb|ACD84316.1| Phenylalanyl-tRNA synthetase beta subunit [Methylacidiphilum infernorum V4] Length = 765 Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 242/821 (29%), Positives = 395/821 (48%), Gaps = 75/821 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLT-----SIGLEVEKVDNREALSPFTIVKVLSVERN 55 MK +L+WLKD+++ + L I + LT ++ +D ++ + ++LS + Sbjct: 1 MKISLNWLKDYIELEQPLSAIVEKLTLGGVEVEEVKEVGIDEQK----IVVGEILSWRNH 56 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 P+ D + + TG +++ VVCGA N G A PG+ +P I RKIRG S Sbjct: 57 PNADRLRLCEVFTGT-EKLNVVCGAKNFDTGDKVALALPGAVLPGGVQIAE-RKIRGEHS 114 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+CSEKEL LSD + IM LP +A VG L D ++D+ +TPNR D + G+ Sbjct: 115 YGMLCSEKELGLSDSAEGIMILPREAVVGSPLPSLFP-RDALLDLEITPNRPDLLSYIGM 173 Query: 175 ALDLVAAGLGKLKEINI---SC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 A ++ A GLGKLK C PL +++ + +++ C ++ C ++ V Sbjct: 174 AREMAALGLGKLKLPGFLVHPCLEPLGQDTL----RVVIENIKKCPFYSGCLLENVHVGP 229 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W+ RLKA G R I+ +VDITNYV L+ G P H FDA R+ + + VR A GE Sbjct: 230 SPLWLASRLKASGFRPINNVVDITNYVLLETGEPLHAFDADRLGAPEIHVRDARRGELFA 289 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +EY+L ++VIAS R +++AGI+GG H+ ++TT +L+E A +DP I +S Sbjct: 290 GLDGKEYELIESDLVIASSTRAEALAGILGGIHSAIGESTTSLLLESAWFDPGTIQQSSN 349 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 L + T+S YRF R VD Q ++P K V L+ + G + ++ I Sbjct: 350 RLAVATESSYRFARRVDPQVVLPARKRAVELLQKMTGARLVGKTESGSLPETKHSITLRA 409 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIY 467 ++++ S P E+ + L LG S+ E + + +PS+R D++ + DL+EE++R+ Sbjct: 410 QKLEKFSAFSWPEEEIKKKLLSLGLSLKEETQEGYRWEIPSFRPDLQIEEDLIEELVRLK 469 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G+D S P + + Q + +K+ LAS+ E + + +Q Sbjct: 470 GLDGFPSRVPPGFALPSQSE--KQWDKILSLKQALASKGYHECITIPLLKDDQQ------ 521 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 +L + NP S + +R+S L LL N R + IFEV ++ N ++ + Sbjct: 522 PDKLSLSNPSSVHYAKLRSSFLDSLLGVASTNWRRGNKEIKIFEVGALFFNAQGMVKEEL 581 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 GI G E W+ K R +D +D K D L + G + Sbjct: 582 CLGILIGG---EMGSLHWTGKP----RKIDYYDLKQIT----------DYLEEKKG---F 621 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 Y R + E HP F + P E L+ KKR + + Sbjct: 622 YKEERR------------HLQEIHPGAP--FDIPFPCFYAEYSLE----EWKKREEEIPL 663 Query: 708 VH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ---GKSLGEGK 762 H L S ++RD+A IVD+ + ++N I + ++ + +FD+F+ G + + + Sbjct: 664 YHPLPSQPAIRRDIAIIVDKKLQHQEILNAITDQHVPFLESIELFDLFEDPLGSRIPQDQ 723 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A + + T DD+I +++ +I E + K R Sbjct: 724 KSMAYALTFRAPDRTLTDDEINVIITKIKEGLRGKIPCSFR 764 >gi|218886081|ref|YP_002435402.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757035|gb|ACL07934.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 805 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 234/832 (28%), Positives = 408/832 (49%), Gaps = 61/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WL++ + + + E++ D LT +GLE+E++ +A+ + V+ ++P+ D Sbjct: 1 MLLSLAWLREFVPFEGTAEQLGDRLTMLGLELEEIRRPFDAIRAIVVGHVVERAKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G+ + + +VCGAPNV G A G+ +P +++ K+RG S GM+ Sbjct: 61 KLSVCKVDAGQGELLDIVCGAPNVAAGQKVPVALVGTTMP-GGLVIKKAKLRGQPSHGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSDD IM LP VG L D L+L + D+S+TPNR+DC+ V G+A + Sbjct: 120 CSERELGLSDDHEGIMVLPEHFTVGRLLVDELQLDMEVCDISITPNRADCLSVLGLARE- 178 Query: 179 VAAGLG---KLKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 VA G G L +N+ P S + +EI D +LC + ++ +R +P Sbjct: 179 VALGFGLPLTLPRLNLVEDGPDCSGEVAIEIA----DPALCHAYHGRILENIRVGKSPAR 234 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 +R RL A+G+R IS +VD TNYV ++ G P H FD + + V A +GE+I+ LD Sbjct: 235 IRHRLTAIGVRPISNIVDATNYVMMELGQPMHAFDLDLLEGARIVVSPAVAGERIVTLDG 294 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q+ L +++I + ++AG++GG ++ D TT VL+E A++ P + R+G+ LG+ Sbjct: 295 QDRALVAGDLLIRDAVKPVALAGVMGGANSEVSDATTRVLLESAVFRPGTVRRTGRRLGL 354 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEV 411 +++ YRFERGVD G + + ++ L G +C A + + F + Sbjct: 355 SSEASYRFERGVDQAGAVYAMHRAAQMMAELSGARLRPGMCSAEPRPWTSPALRFRPARA 414 Query: 412 KRLSGI------DVPIEDSLR----ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 + L G+ D D+L +L+R S ++ +VS PS R D E +ADL+E Sbjct: 415 RMLLGMGEDTIGDAFCADTLTGLGCVLDRTQGSDAADW---KVSAPSHRLDFEREADLIE 471 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISK 518 E+ R+YG+D I P+ + +S + KR+ + E +N+SF+ + Sbjct: 472 EVGRVYGLDAIP--PVLPKVMRPLDQAGAPESEYDFWKRIKGWGRGLGLNEAINYSFVGQ 529 Query: 519 EQSVLFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + G + + I+NP+S D + +RT+L PGLL N+ + A +FE++ ++ Sbjct: 530 KDLDHLGLPAEGRIPIMNPLSEDQNVLRTALAPGLLNNLRHNIAQGNAGLRLFELARIFT 589 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSG----RLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 D +G GI G W + + D D K V+E F Sbjct: 590 ADA----TAETTACERGRLGILMYGARHDSAWPNPEAD----ADYQDLK----GVVEHFA 637 Query: 634 SLDSL-RFESGAPSWYHPGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + L + HP + + + + VLG G P++ D + + ++ L Sbjct: 638 AFLHLPQPHCAMAEAPHPFLAPCVTVTVQGRVLGVMGRVRPDLADAYHARKDVWLADLDL 697 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 D+ Q T + L PV+RD+ + + AG +++ ++ + L++ V + Sbjct: 698 DA--ARQLHDAVTVRFAALPVYPPVRRDITVMAPAALQAGAVLDHVRGMKLPLLEGVELI 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 DVF + E +++ ++ + T +D ++ D+ E V VL Sbjct: 756 DVFAPEDREE--RNLTFRMTFRHAGRTLKDAEV----DKEREKVASSLQQVL 801 >gi|305682122|ref|ZP_07404926.1| phenylalanine--tRNA ligase, beta subunit [Corynebacterium matruchotii ATCC 14266] gi|305658595|gb|EFM48098.1| phenylalanine--tRNA ligase, beta subunit [Corynebacterium matruchotii ATCC 14266] Length = 822 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 240/849 (28%), Positives = 392/849 (46%), Gaps = 72/849 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE---- 53 M T SW++ L V+ ++ +G E E ++ E P + +V+++E Sbjct: 1 MLITQSWVQSLLPDFAGVTPAELDAMYVQVGFETEGYESIPETTGPLVLGRVVAIEELTE 60 Query: 54 -RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + P C +L G Q ++CGA N VG + V A PG+ +P ++ R+ G Sbjct: 61 FKKPIRYCQVL---VGPDQVQNIICGAQNFSVGDIVVVALPGTVLP-GGFEISARQTYGR 116 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S GM+CS EL L+ S+ I+ L P G + L L D + DV++TP+R + R Sbjct: 117 VSEGMICSAAELGLTTRSSGILTLDSGEP-GADAREVLGLDDTVFDVNITPDRGYALSAR 175 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGV-RN 227 G++ +L A+G G +P I +L + K F + V G+ Sbjct: 176 GLSREL-ASGFGLSAVYQDPALAEFPQVPQPTSKLIGVELRPETKAKRFGLRRVSGIDPK 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 P W+++ L G + ++ D+TNYV L G P H FDA +IS L VR A GE++ Sbjct: 235 ATTPWWLQRELLLSGQQPVNPATDVTNYVMLALGQPMHAFDAEKISGDLVVRLARQGEQL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ L P++VVI D IQS+A ++GG + +TT+V E A WDPI ARS Sbjct: 295 ETLDHVVRKLDPEDVVICDDAGIQSLAAVMGGVSSEISADTTEVYFEAATWDPIVTARSS 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + + +++ RFERGVD + L +L+ + GGT ++ + + P I Sbjct: 355 RRHKLSSEASRRFERGVDPALVEVALDMACALLQDIAGGTISTGRTVVGEVPVMP-TIRM 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S +++G+D E + L +G V +V P+WR D+ E ADLVEE+LR+ Sbjct: 414 AVSRPGQIAGVDYAPETVVGRLREVGCKVTEHDGMLDVVPPTWRPDLTEDADLVEEVLRL 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G+ I P + V + L+ Q R R + LA +E++ FI ++ +G Sbjct: 474 EGLADI---PAIVPTVSAGKGLTPAQKRRRAIGHALAYGGYVEILPTPFIRQDTFDTWGL 530 Query: 527 GQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + + NP+ AD + + T+LLP +L+A RNV R + + ++F V Sbjct: 531 AAEDERRNAVAVRNPLDADYAIVGTTLLPSMLEAVARNVARGMTNLSLFGQQQVSVVQGA 590 Query: 582 EGQKYMAAGIRK----------------------GSSGIEGSGRLWSDKSEERCRFVDLF 619 ++ R G+ IE SG W + E + D Sbjct: 591 GMSPMLSVAQRPSDAEIAGLLSTLPYQPLHVATVGTGLIEFSGP-WGEGRE--YSYADAI 647 Query: 620 DAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 ++ A A V SL E+ +HPGR + +V+G+ GE HP +++ Sbjct: 648 ESAKLVARAAGV--------SLTVENAEYLPWHPGRCAALLVDG-VVVGHAGELHPQVVE 698 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VN 735 GL C E+ + ++P++Q LS+ VK+DLA +V + +PA T+ Sbjct: 699 RLGLPKRTCAMELNVSALPLTQVLPAPV-----LSAFPAVKQDLALVVPEDVPAETVRQT 753 Query: 736 IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 II L++ V +FDV++ LG KS+A ++ + T D++ + E Sbjct: 754 IIAGGGDLLETVELFDVYRSAGLGADVKSLAFALVFRAPDRTLTDEECSVGRLAAAELAA 813 Query: 796 KKTNAVLRS 804 K+ A +R+ Sbjct: 814 KRFGAHMRA 822 >gi|308234397|ref|ZP_07665134.1| phenylalanyl-tRNA synthetase, beta subunit [Atopobium vaginae DSM 15829] gi|328944241|ref|ZP_08241705.1| phenylalanyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] gi|327491160|gb|EGF22935.1| phenylalanyl-tRNA synthetase beta subunit [Atopobium vaginae DSM 15829] Length = 836 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 239/860 (27%), Positives = 403/860 (46%), Gaps = 80/860 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M+ + WLK +D + G EVE VD A ++ +VLS +PD D Sbjct: 1 MRISYEWLKTLVDIPDDPNDLVREFIRTGTEVEAVDTTGADITHVVTSQVLSKTPHPDSD 60 Query: 60 CA-ILRIDTGKHQE--------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + ++D G + +QVVCGA N G V A G+ +P ++ + K+R Sbjct: 61 HMFVCKMDVGTYHTDDKGNPIPLQVVCGAQNFNEGDKTVTALVGATLP-GDIHIKKGKLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 G+ES GM CS +EL LS D IM L APVG + L D +ID +TPNR DC+ Sbjct: 120 GVESCGMNCSARELGLSSDHTGIMILDPTAPVGVDFCTWKNLRDTVIDCEITPNRPDCLS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLE--------IKFDLDDSSLCKGFAMCCV 222 + GIA ++ A N C +S E + E + + D +LC + + Sbjct: 180 MLGIAHEVSAM-------YNEPCHISLEGVKHESAPSTQDLVDVRIQDDTLCPRYTARVL 232 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD------VL 276 V +P W+R+RL A G R I+ +VDITNYV G P H FD +++S + Sbjct: 233 HNVVIKESPEWLRKRLIAAGTRPINNVVDITNYVMYLTGQPLHAFDLAKLSADENGKRHI 292 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEV 335 VR A +GE ++ LD+QE L+ D +VI+ +G+ ++AG++GGK++ D++T DVL+E Sbjct: 293 VVRAAHAGETLVTLDDQERTLTDDMIVISDNGQTPLALAGVMGGKNSEIDESTQDVLLES 352 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIA 394 A + +I+R+ +NL +++++ R+ER +D+ G + +L + S + Sbjct: 353 AAFSAGHISRTSRNLDLMSEASIRYERQIDVNGCARASEIAAALFEAYASAEVSKGLLDV 412 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD------------ 440 +P I + V L+G + LERLG +V D Sbjct: 413 YPHVVEPVCIKLRSKRVCELAGETIQPNFMKERLERLGCTVKPCNSSDTQNADACTQPSD 472 Query: 441 ---KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 ++ V P+ R D+ + DLVEEI+R++G I + LP + LS +Q R Sbjct: 473 NACEYLVYAPTNRPDLTREIDLVEEIVRLWGEGDI-TPTLPAAR-NHAGGLSEEQRYLRC 530 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLL 553 + L + + E ++F G G ++I+ P+ AD S MR ++PGLL Sbjct: 531 IGATLRASGLSETTTYNFADPADLERLGMSEEGRGVPIQIIRPLVADQSEMRRDIIPGLL 590 Query: 554 KATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 ++ N+D + + ++E+ V+ E+ + + AG+ GS W+D + Sbjct: 591 RSVAYNLDHGVKNVHLYEIGRVFFGHEHKSQPTESVYVAGVMCGS---------WADDAW 641 Query: 611 -ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS---WYHPGRSGIIKTSAEIVLGY 666 D FD K + E + L +R++ P W PG + + S E + G+ Sbjct: 642 CASYPAFDFFDVKGVVEQLCE-RLRLTKVRYKVADPQAFGWLQPGCAAELICSGEHI-GW 699 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G HP FG+S P+ FE+ ++ + V +L V DLA +VD+ Sbjct: 700 LGVLHPKSCKNFGVSEPVMAFELSCAALLRHAHHELPYQDV---PTLPGVSIDLALVVDE 756 Query: 727 HIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK-SLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + A +++ + + +L+ DV +FDV++ + +G KKS+ + + T +++ Sbjct: 757 DLDAESIMQRLSSAGGKLLTDVRLFDVYRDEVRVGAHKKSMTFSLTYRCDDHTLTSEEVN 816 Query: 785 ILMDRIVENVVKKTNAVLRS 804 +++ + + A +RS Sbjct: 817 KAHTKLIAKITRSCKAEIRS 836 >gi|300767196|ref|ZP_07077108.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300495015|gb|EFK30171.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 805 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 222/824 (26%), Positives = 406/824 (49%), Gaps = 40/824 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ + +WL+D+L D+ +++ + + +EV+ V E L + VL+ E +PD D Sbjct: 1 MRISTTWLRDYLKLDIPADELAEKIERTAVEVDGVIRPSEGLKKVVVGHVLTCEPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + +Q+VCGAPNV G + A P S I + I K+RG+ S GM+ Sbjct: 61 HLHVCQVDVGESEPLQIVCGAPNVAAGEKVIVALPNSWIGGHTKIKK-SKMRGVPSNGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ EL + + I LP DA G + YL + D IID+S+TPNR D + + Sbjct: 120 CALDELGFDEKLVPKEVADGIFILPDDATPGDPVFSYLGMDDEIIDMSVTPNRGDMLSMN 179 Query: 173 GIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A +L A + K+ + ++++ + + + D D + K M +K V Sbjct: 180 GTAHELAAIYDQQPTMPKVDLHEDATTVAADDLHVAVAADEHDVPMYK---MRLIKNVTI 236 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEK 286 +P W++ R+ G+R I+ +VD TNY+ + G P H FD +++D + VR A +GE Sbjct: 237 KPSPLWLQIRIWNAGMRPINNVVDATNYILMQYGQPLHAFDFDQLNDGQINVRLAKAGEH 296 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD ++ +L +++I S + +AG +GG D TT + +E A++D + I ++ Sbjct: 297 LTTLDGEDRELLTSDLLICSGDQPICLAGTMGGLATEVTDQTTTIALEGAVFDAVKIRKT 356 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKI 404 N + +++ R+ERG+D GM + +++ G AS + I R+ +P + Sbjct: 357 AHNHDLHSEASMRYERGID-HGMTATALDAAAAMIAELGDGQVASGMVIGRDEDVQPTTV 415 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + + G ++ ++ I +RL F + + F V+VPS R D+ ADL+EEI Sbjct: 416 TIDLARINHVLGTELSLDTVSDIFKRLDFPTVVANETFTVTVPSRRWDIHIPADLIEEIA 475 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R+YG D + + LP Q + +QQ R ++++ S + + +++S ++ +S F Sbjct: 476 RLYGYDNLPAT-LPTGQPTIGKLNEIQQV-IRDSRKLMESAGLTQAISYSLTTETKSKAF 533 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++ L+ P+S++ + +R SL+ GLL N R + A++E V+ + + Sbjct: 534 ALHASDVTKLDFPMSSERTTLRLSLVSGLLDDLAYNNARKEHNVALYEEGRVFYS---QP 590 Query: 584 QKYMAAGIRKGSSGIEGS--GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++ I + I GS + W + VD F K ++ D++ + Sbjct: 591 EQVRPKEIEHIAGAITGSMVPKSWGVAEQP----VDFFQIKGIVAGYLKSLALQDAVSYV 646 Query: 642 SGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + A HPGR+ I ++V G+ GE HP + + FE+ L ++ K Sbjct: 647 ATAEHPEMHPGRTADIYVGDQLV-GFVGEVHPTTAKAYKIRETYV-FELDLTALIALPKA 704 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 R + + + S + RD+A ++D + T+V +I K + V +FDV+ G + Sbjct: 705 RQQYQPISKFPS---ITRDVAMLIDDDVTNATVVALINKKGGAHLRHVQLFDVYNGSHVP 761 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + Q T DDD+ ++++ + + A +R Sbjct: 762 AGKKSLAYTLTYQDQNATLVDDDVTTAFEKVLTALTDELGAEIR 805 >gi|256819977|ref|YP_003141256.1| phenylalanyl-tRNA synthetase subunit beta [Capnocytophaga ochracea DSM 7271] gi|256581560|gb|ACU92695.1| phenylalanyl-tRNA synthetase, beta subunit [Capnocytophaga ochracea DSM 7271] Length = 810 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 237/832 (28%), Positives = 402/832 (48%), Gaps = 52/832 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK +L ++ E LT +GLEVE +++ E+ L + VL E++P Sbjct: 1 MKISYNWLKQYLKLEMPAEDTAVILTDLGLEVEGIEHFESVKGGLKGVVVGHVLECEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D I ++D G +Q+VCGAPNV G + A G+ + + + KIRG Sbjct: 61 NADKLKITKVDVGGEAPLQIVCGAPNVAQGQKVLVATIGTVLYDKAGKPFEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L VG S E+ +D + ++ LTPNR+D + Sbjct: 121 ESYGMICAEDELGLGESHDGIMVLDSKWEVGTPASKVFEVETDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + K + + P ++ L++ ++ + L + + VR Sbjct: 181 YGVARDLRAGLMQKGISLELITPSITKFHVDNRSLKMDIEVQNKKLVPRYTGVTISNVRV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 + +P W++ +LKA+G+ + +VD TNYV G P H FDA I + V+ A G K Sbjct: 241 DESPEWLQNKLKAIGITPKNNVVDATNYVLHGMGQPIHAFDADHIIGRKVIVKNADEGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E L+ ++++I + IAG++GG+++G T +V +E A +D +++ ++ Sbjct: 301 FKTLDGVERTLNAEDIMICDAEKPLCIAGVLGGENSGITHFTRNVFLESAYFDAVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK-- 403 K GI TD+ YRFERG++++ L + LI ++ GG +SD+ I + P+K Sbjct: 361 AKRHGINTDASYRFERGINIEDCKYALMYAAVLIENIAGGVISSDV-----IDFYPKKQE 415 Query: 404 --IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+ E + +L G + + IL L V ++ +SVPS+R DV+ +AD+ Sbjct: 416 DFQVFLTFEKIDKLIGQKISRDTIKAILHSLDIKVNSFTERGLGLSVPSYRVDVQREADV 475 Query: 460 VEEILRIYGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 +EEILRIYG + I SE L T N + V L ++ E++ S +S+ Sbjct: 476 IEEILRIYGYNNVIFSEKLNATMAHS--NKYDDHNIQNVVADQLVAKGFFEIMTNSLVSE 533 Query: 519 EQSVLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---H 574 ++ + ++ +++LNP+S+D+ MR +L+ L+ N +R +D +FE H Sbjct: 534 KEITTYAENPEQAVKLLNPLSSDLGYMRKNLVFSGLEVIAYNNNRKRSDLKLFEFGKNYH 593 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + + E + + G+ + E + LF+ I P + Sbjct: 594 YIDGNYTENKHLVLYLTGNTQPEYWGAPAQKTSFFELKGVVESLFERLGLKEITILPLEA 653 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 D+L E G E +LG G +L F + + +++ + I Sbjct: 654 NDTLSSE------------GFRWQIGETLLGTIGVVKSKVLKDFDIKQEVLVADLHWEVI 701 Query: 695 PISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFD 751 ++ + KVV+ +S V+RDLA ++D+ + L ++ L+ V +FD Sbjct: 702 L----EQVQDHKVVYKEISKYPEVRRDLALLLDEKVTFADLYEKAYATEKNLLKHVNLFD 757 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+QG L EGKKS A+ ++Q T D I M + + K+ A LR Sbjct: 758 VYQGDKLPEGKKSYALSFVLQDNNKTLTDKQIDKTMQHLQDAFEKQFGAALR 809 >gi|313203687|ref|YP_004042344.1| phenylalanyL-tRNA synthetase beta subunit [Paludibacter propionicigenes WB4] gi|312443003|gb|ADQ79359.1| phenylalanyl-tRNA synthetase beta subunit [Paludibacter propionicigenes WB4] Length = 819 Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 241/842 (28%), Positives = 410/842 (48%), Gaps = 62/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 M + +WLK +++ D++ +++ LTSIGLEV V+ + L I +VL+ + Sbjct: 1 MNISYNWLKQYINIDITPDELSKALTSIGLEVGGVEEVQTIKGGLEGLVIGEVLTCVNHE 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D + ++ G + IQVVCGAPNV G V A G+ + E + + KIRG+E Sbjct: 61 NSDHLHVTTVNIGTPEPIQVVCGAPNVAAGQKVVVATVGTKLYSGEESFSIKRSKIRGVE 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVR 172 S GM+C+E E+ + I+ LP++A G DY + +D +++V +TPNR D Sbjct: 121 SFGMICAEDEIGVGTSHDGIIVLPVEAVPGTLAKDYYGIKNDTLLEVDITPNRIDAASHF 180 Query: 173 GIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A DL A K K + ++ P + ++ L I ++++ C ++ + GV+ Sbjct: 181 GVARDLAAFFALKDKSVKLTKPSVEGFAIQNTNLTIPVTVENTDACPRYSAVTISGVKVA 240 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ L +GLR I+ +VD+TNYV + G P H FDA +I + V+ G Sbjct: 241 ESPEWLKNYLHVIGLRPINNIVDVTNYVLHELGQPMHAFDADKIKGGEVRVKTLAEGTPF 300 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L+ +++I + I G+ GG +G + T +V +E A ++P++I ++ Sbjct: 301 TTLDGAERKLNAADLMICNAKEPMCIGGVFGGLDSGVTETTQNVFLESAYFNPVSIRKTA 360 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 + G+ TD+ +R+ERG D I VLK LI + GG +SDI KP ++ Sbjct: 361 RRHGLNTDASFRYERGCDPTNTIYVLKRCALLIQEVAGGQISSDIVDIYPQEVKPFEVSV 420 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILR 465 ++ L G ++ E+ IL L ++ + ++ + + VP++R DV+ D++E+ILR Sbjct: 421 SLRKINTLIGKEIGKENIETILAALEMKIVSQNEEGYVLHVPAYRVDVQRDVDVIEDILR 480 Query: 466 IYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKE 519 IYG + ++ E L K LS Y + L ++ EV+N Sbjct: 481 IYGYNNVEIGETL-------KSTLSYSSKPDSYKLQNLISEQLTAQGFNEVLN------- 526 Query: 520 QSVLFGGGQREL---------EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S+ GG +L +I+N +S+D++ MR +LL G L+ RNV+R AD + Sbjct: 527 NSLTKGGYYTDLTSYPAAHSVKIINSLSSDLNVMRQTLLFGGLENINRNVNRRNADLKFY 586 Query: 571 EVSHVY---ENDTPEGQKYMAAGIRKGSSGI----EGSGRLWSDKSEERCRFVDLFDAKA 623 E + Y + EG+K +AA G+ G+ W+ E+ +++ KA Sbjct: 587 EFGNCYYYHAENKKEGEK-LAAYSEDMHLGLWLTGNKHGQSWTATDEKSS----IYELKA 641 Query: 624 DALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 +++ +L L A + I ++A L +G H NI + Sbjct: 642 YIENILRRLGFNLRKLIVGEYADDLLSDALT--IYSAAGRKLAVYGIVHHNIRKVTDIDQ 699 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR 742 + ++ ++I + K LS VKRDLA ++D+++ + I +R Sbjct: 700 EVYYADLNWNAILAELGEHKVQYK--ELSKFPDVKRDLALLLDKNVAFAEIEKIAFETER 757 Query: 743 -LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 L+ V +FDV++GK+L GKKS A+ L+Q T D I +M ++ N K A Sbjct: 758 KLLKKVNLFDVYEGKNLEAGKKSYAVSFLLQDETKTLTDTQIESIMKKLQANFETKLGAK 817 Query: 802 LR 803 LR Sbjct: 818 LR 819 >gi|293381814|ref|ZP_06627787.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] gi|290921632|gb|EFD98661.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 214-1] Length = 806 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 230/814 (28%), Positives = 403/814 (49%), Gaps = 43/814 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD LD D ++ + +T G+E+ ++V + L + +VL E Sbjct: 1 MLVSYNWLKDFLDLDGQDPYELAEEITRSGVEIPDRVHPMDGLKKLVVGRVLDCEGVEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+ Sbjct: 61 HLHLTHVDVGEDEPLQIVCGAPNVAAGEDVIVALHGARIAGNEKIKK-GKIRGMESYGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +E+ SD I P DA V G + + L + D I++ +TPNR+D +G Sbjct: 120 CGLQEIGFSDSVVPQEFVDGIYVFPADAEVKPGQDVYEALGMDDYILNFDITPNRADTLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + ++ L + D+ D L F + ++ V+ Sbjct: 180 MEGAAYE-VGAIIDQKPKVEEKVVLKEDGPAWTDSLDVKVDEKLAPKFYLRKLENVKIQD 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 239 SPLWLQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P +++I + +AG++GG + TTDV++E A++DP + ++ Sbjct: 299 LLNEKEVDLDPKDIIITDGKKPVMMAGVMGGLDSEITSETTDVILESAIFDPTLVRKAAL 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + +P + Sbjct: 359 RHANRTEASSRYEKGVNWDATEKAINMAALLLRNDADATVDEGILKATDQKREPVVVKTT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + ++ G + +++ ++I +RL F V + D V VP+ R D+ ADLVEE+ R+Y Sbjct: 419 ASYLNKVLGTKLSVDEIVKIFDRLCFKVDVDGDNLAVHVPNRRWDISIPADLVEEVGRLY 478 Query: 468 GVDQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G D ++S +P LP T S ++ R +K ++ + +ME +++S S E++V + Sbjct: 479 GYDNLESTQPVLPETH----GGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYT 534 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 +EL E+ +P+++ S MR +L+ GL+ A N R A+FE Y++D + Sbjct: 535 KDPKELVEVKSPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRTYDHDGGKFN 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 +++AA SG +++ + + VD + K ++ + + + +E Sbjct: 595 EHEHLAAIY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFNAIGIDPEKVVYE 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HP-NILDFFGLSNPICGFEVYLDS-IPISQ 698 + HP R+ I + V G G H I D + + G+E+ LD+ IP+ Sbjct: 646 AKGIKGMHPTRTAGIYIDKQYV-GMIGMIAHAVTIADKALRGSELYGYEIDLDTIIPM-- 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK V ++RDL+ +VD+ + + N+IK N + + ++ V DV+ G Sbjct: 703 --LTKGVTAVPAPKFPAIQRDLSLLVDKPVTNQEIENVIKSNAGKYLTELKVIDVYAGAH 760 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + GKKS+A + KDT DD + MD+IV Sbjct: 761 IDVGKKSIAYNLTFLNRKDTLTDDVVNNAMDKIV 794 >gi|162451662|ref|YP_001614029.1| phenylalanyl-tRNA synthetase, beta subunit [Sorangium cellulosum 'So ce 56'] gi|161162244|emb|CAN93549.1| phenylalanyl-tRNA synthetase, beta subunit [Sorangium cellulosum 'So ce 56'] Length = 820 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 237/815 (29%), Positives = 390/815 (47%), Gaps = 47/815 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNP--D 57 M + WL++ L D ++ + L GLEV++V + AL + V++ +P Sbjct: 1 MLISYKWLQEILGADPGVDAVTSALGRGGLEVDRVTHVGAALRSVVLASVVATRPHPAGK 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVG-LLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 ++R+D G +E++V CGAP + L +AP G+ + + + + + + G Sbjct: 61 KGLTVVRVDAGD-REVEVACGAPVIPAAPALVCYAPVGAQVLDRTGALVTLTEKAVAGFT 119 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY-LELSDPIIDVSLTPNRSDCIGVR 172 S GM+C+E EL L ++ + P G L D+ L D II++S+TPNR D +G Sbjct: 120 SPGMLCAEDELGLGSSHEGLLTVEGGRP-GQSLLDWEPRLEDWIIELSVTPNRPDALGHL 178 Query: 173 GIALDLVAAGLG-KLKEINISCPLSSES----IPLEIK----FDLDDSSLCKGFAMCCVK 223 G+A D VAA LG + ++ P ++ + P +++ ++ D C + ++ Sbjct: 179 GVARD-VAAVLGLPFRPPAVAAPRANGANGAGAPADVQTRAAVEVRDGDRCPRYDGQVIE 237 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 GV +P W R RL +G+R I+ +VD TN V L+RG P H FD + + +RRA Sbjct: 238 GVSVGPSPLWARVRLGRLGVRPITNIVDATNLVMLERGQPLHAFDLDTLRLPIEIRRAKP 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE +ALD Q+ L D++VIA R+ ++AG+IGG +G T V +E A ++P I Sbjct: 298 GEAFVALDGQKLSLDEDDLVIADADRVVALAGVIGGADSGVTATTRRVFLESAYFEPRGI 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-PR 402 RS + G T++ +RFER VDL G+ +LI L GG A+ I + + PR Sbjct: 358 RRSARRYGFHTEASHRFEREVDLSGVPLSRDRGSALICELAGGEAAGEPIDAYVAPRAPR 417 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVE 461 ++ +R+ G + P + ILE LG SV+ + D+ V VP R D+ E+ DL+E Sbjct: 418 RLTLRLPRYQRIIGAEAPAR-AREILETLGLSVLEQKADRLLVEVPEHRPDIAEEIDLIE 476 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ- 520 E+ RI G DQI S LP + R R V+++ + E V +SF+S ++ Sbjct: 477 EVARIAGYDQIPSR-LPRVGAAPAGARGDYRLRRR-VRQICTGIGLHEAVTYSFLSPQEL 534 Query: 521 -SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + + G L +LNP+S + S MR SL+PGLL R+ + +FEVS V+ Sbjct: 535 KAARYDDGSL-LRLLNPLSEEKSVMRPSLVPGLLTVVQRSQRYNVPRVRLFEVSQVF--- 590 Query: 580 TPEGQKYMAAG--IRKGSSGIEGSGRLW------SDKSEERCRFVDLFDAKADALSVIEP 631 P + AG R + RL D R VD +D K +VI Sbjct: 591 LPWQGEAGGAGQLARVERPPVNEPTRLTIFLAGPRDSYLTRPEDVDFYDGKGAVEAVIAE 650 Query: 632 FVSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + F+ P W HP + + V GY E HP++ + +++ E+ Sbjct: 651 LAGSVTPAFDLAGEPPPWAHPKKGARVLLDGREV-GYVAELHPDVREALEITSGAVVAEL 709 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVT 748 L + K S ++ D+A ++ +PAG ++ +++ + V Sbjct: 710 DL----AAVAAAYKAPAAAKPSRFPAMRHDVALLLPLDVPAGEVLEVLRTTAGERCEKVE 765 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 +FD ++G+ L G S+ + + + T DD++ Sbjct: 766 MFDRYRGEELPAGTHSLGFALWFRSAERTLTDDEV 800 >gi|298345156|ref|YP_003717843.1| phenylalanine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304390743|ref|ZP_07372695.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|298235217|gb|ADI66349.1| phenylalanine--tRNA ligase [Mobiluncus curtisii ATCC 43063] gi|304325626|gb|EFL92872.1| phenylalanyl-tRNA synthetase beta subunit [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 872 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 253/891 (28%), Positives = 423/891 (47%), Gaps = 107/891 (12%) Query: 1 MKF-TLSWLK--DHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 M F ++ WL+ + D S ++ L +GLE E + P +V+S+ Sbjct: 1 MAFVSIEWLRRWAAVPADTSASQLAKDLVKVGLEEEAIHTSGVTGPLVCGRVVSMVPETA 60 Query: 58 LDCAIL---RIDTGKH--------------QEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 + + R+D G+ ++CGA N + G V + PG+ +P Sbjct: 61 SNGKTVNYCRVDVGEEFNDAPGTGKEPSDIPSRSIICGAHNFKEGNHVVVSLPGAVLP-G 119 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASI-----------MELPIDAPVGGRLSDY 149 + + RK G S GM+CS +EL L DS I ME+P AP G + Sbjct: 120 DFAIATRKTYGHISDGMICSARELGLGQDSNGIIVLEEYLGERGMEVP--AP-GTDMLPI 176 Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS------CPLSSES-IPL 202 L L+ ++++++TP+R C +RG+ + + K + ++ P ++S P+ Sbjct: 177 LGLNQELLEINITPDRGYCFSMRGVGREYSHSTGAKFTDWGLAENLKNGLPAVNDSGFPV 236 Query: 203 EIKFDLDDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNY 255 EI +D++ +G C V+G+ N P WM RL++ G+RSIS VD+TNY Sbjct: 237 EI----EDAAPIRGHVGCDRFVARIVRGLNPNAPTPQWMVARLESAGMRSISLPVDVTNY 292 Query: 256 VSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI-----ASDGRI 310 V LD G P H +D +++ L VRRA GE+ LD+ E L ++++I R+ Sbjct: 293 VMLDLGQPMHAYDLDKVTGPLVVRRARQGEQHTTLDDVERTLDAEDLLITDCQGGHGARV 352 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 IAG++GG +++T+VL+E A +D +++ARS + + +++ RFERG D + + Sbjct: 353 LGIAGVMGGADTEMTESSTNVLLEAAHFDAVSVARSARRHKLPSEASKRFERGSDPE-LP 411 Query: 371 PVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILE 429 PV + +L GG D + KP+ V + + RL G++ + +L Sbjct: 412 PVAAQYAAELLVEYGGGTIDPGVTDVNHVKPQPTVALPFTAATRLIGVEYSPQRVEELLR 471 Query: 430 RLGFSVI-GEYDKFEVSVPSWRQDVE-EKADLVEEILRIYGVDQIKS-EPLPLTQVEDKR 486 +G +V + D F V PSWR D+ A L+EEI R+ G ++I S P+ ++ + Sbjct: 472 AIGCNVTKSDADTFSVVPPSWRPDLAGGPAHLIEEIARLDGYEKIPSVVPVGPAKIGNPA 531 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL---FGGGQRE-LEILNPISADMS 542 L + R V LA + EV+ + F+ E ++ +R+ +++ NP++ D Sbjct: 532 PLRTR----REVSDTLAEAGLTEVMTYPFLGNEHDLMGLPVDDPRRDTVKLANPLADDSP 587 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--------------ENDTPEGQKYMA 588 +R+SLL LL RNV R AIFE+ V E + E + + Sbjct: 588 ALRSSLLDTLLNTASRNVSRGNPRVAIFELDQVVSAHGVIPAPIPGVEEKPSDEAMQALR 647 Query: 589 AGIRK---------GSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSL 638 AG+ K + IE S + + + + A + L+V + + Sbjct: 648 AGVPKQPWHVAAVLAGNAIEASPHDAARAWDWADAIELAIRVAVSQGLAVRPEALGVGG- 706 Query: 639 RFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 ++ + +HPGR I+ A VLGY GE HP + FGL C FE+ LD+I Sbjct: 707 --QAAIAAPFHPGRVAQIRVGAFTGGKVLGYAGELHPKVCQNFGLPPRTCAFELDLDAI- 763 Query: 696 ISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVF 753 +K R K ++ +S+ K DLAF+V Q +PA + N I K + L++++ +FDVF Sbjct: 764 --EKSRPKDAFQLRPVSTFPAAKEDLAFVVKQDVPALKVANAIAKAGEGLVEELRLFDVF 821 Query: 754 QG-KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + LGEG+KS+A + ++ T +I+ +RI++ V K A LR Sbjct: 822 ENVEQLGEGRKSLAFALRLRAADRTLSPQEIKETRNRIIKKVEKTCQATLR 872 >gi|315281996|ref|ZP_07870504.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria marthii FSL S4-120] gi|313614358|gb|EFR87994.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria marthii FSL S4-120] Length = 802 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 230/827 (27%), Positives = 412/827 (49%), Gaps = 49/827 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP VG L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYADGIYVLPEHVEVGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ ++ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTQPDVSEKGKADAFISVEVENPADTPYYAIKMIENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKEQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + ++TT V +E A++ +I + Sbjct: 295 EITTLDGEKRALQAGHTVITNGTEPIAIAGVMGGEFSEVTESTTTVALEGAIFSSSSIGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G + + + I RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTAITLAEIETIFARLGFVLEVKDDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHVADWQKTPKPVDFFVLKGIVEGLVNKLGIKAELH 642 Query: 640 FESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ HPGR+ I+ EI GY G HP + + L FE+ + ++ Sbjct: 643 WQQTEKEELHPGRTASIVLEGKEI--GYLGALHPAVEANYDLKETYV-FEINVAAL---- 695 Query: 699 KKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 TK K V H +P + RDLA +VD+ + +IK + L+ ++ +FD+F+G+ Sbjct: 696 LDATKEKVVYHPIPRYPEMTRDLALLVDKDTDHAAISQVIKEHGGNLLVNIELFDIFEGE 755 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SLGE KKS+A + + T ++D++ +++VE + K NAV+R Sbjct: 756 SLGENKKSLAYTLTFLDGERTLVEEDVQKATNKVVEALQTKLNAVIR 802 >gi|296140110|ref|YP_003647353.1| phenylalanyl-tRNA synthetase subunit beta [Tsukamurella paurometabola DSM 20162] gi|296028244|gb|ADG79014.1| phenylalanyl-tRNA synthetase, beta subunit [Tsukamurella paurometabola DSM 20162] Length = 830 Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 251/849 (29%), Positives = 407/849 (47%), Gaps = 65/849 (7%) Query: 1 MKFTLSWL-----KDHLDTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE- 53 M+ SWL +D D V+ +++ +G EVE++D+ + ++ P I +V+++E Sbjct: 1 MRVAQSWLTEILRRDTPDWGVTADELDAGFVRVGFEVEELDSLDTVTGPLKIGRVVAIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 R P C ++D G+ + +VCGA N G L V A PG+ +P + R+ Sbjct: 61 LTNFRKPIRFC---QVDVGEAEPRDIVCGARNFAEGDLIVAALPGAVLP-GGFAIATRQT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDC 168 S GM+CS EL L D + I+ LP A G L + D +I++++TP+R Sbjct: 117 YDHTSDGMICSVSELGLGTDHSGILVLPAGTAEPGDDAKQVLGMDDTVIELNVTPDRGYA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RN 227 VRG+A +L +I P+ + + ++ S C F V+G+ Sbjct: 177 FSVRGLARELACGYDLPFTDITTPSPVQGAGVG-GVDVTVEPESGCTRFTALRVEGIDPK 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNY+ L G P H FDA + L VR + GE + Sbjct: 236 AVSPWWLQRRLLTSGVRPISPAVDVTNYLMLLSGQPLHAFDADTVRGGLVVRASRPGETL 295 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E L P++ VI D S+AG++GG D T +V++E A+W+P+ + R+G Sbjct: 296 ETLDHVERTLDPEDTVIVDDSGPVSLAGVMGGASTEVGDETVNVILEGAVWNPVKVFRTG 355 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 K + +D+ R+ER VD + ++ L+ + GGT ++ +P ++ Sbjct: 356 KRHKLSSDAAKRYERTVDPAISVWTVREAARLLTEIAGGTVVGELTDLGGYGDRP-QVTI 414 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 R++GI ++R L ++G +V GE V+ P+WR D+ ADLVEE+LR+ Sbjct: 415 AADRPDRVAGITYAPGTTVRRLTQIGCAVEGE-SSLAVTPPTWRPDLNMVADLVEEVLRL 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 G++QI P L R LS +Q R R V R LA +EV+ F+ +G Sbjct: 474 EGLEQI---PPVLPAAPGGRGLSARQRRRRTVSRSLAHTGHIEVLTSPFLPAGVFDTWGL 530 Query: 526 ----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + +LNP+ AD ++ T+LLPGLL+ RNV R D A++ ++ V Sbjct: 531 EDDDPRRNTTTVLNPLEADRPSLATTLLPGLLEILARNVSRGQRDLALYTIAQVVLPHGR 590 Query: 582 EGQKYMAAGI---------RKGSSGIEG----------------SGRLWSDKSEERCRFV 616 +G++ + R + IE +GR R Sbjct: 591 DGRRADGTTVAVDPIPVDRRPTAEQIEELNASLPSQPEHIALVFAGRRTPAGPWGEGRAA 650 Query: 617 DLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 D DA +A+ I ++D +LR AP +HPGR + E V+G+ GE HP +L Sbjct: 651 DATDA-FEAVREIGRASNVDLTLRAAQYAP--FHPGRCAEVLV-GETVVGHAGELHPAVL 706 Query: 676 DFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 + GL C E+ LD+IP+ + +S V +D+A +VD +PA + + Sbjct: 707 ERAGLPARTCAVELDLDAIPLVENLPAPV-----VSPFPAVLQDVAVVVDADVPAEAVRS 761 Query: 736 IIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + + L++ +++FDVF G +GEG+KS+A + + T +D+ D V Sbjct: 762 ALADGAGELLEAISLFDVFTGAQVGEGRKSMAFSLRFRAGDRTLTEDEASAARDAAVAKA 821 Query: 795 VKKTNAVLR 803 AVLR Sbjct: 822 SSVVGAVLR 830 >gi|269218557|ref|ZP_06162411.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] gi|269211668|gb|EEZ78008.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces sp. oral taxon 848 str. F0332] Length = 908 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 251/923 (27%), Positives = 415/923 (44%), Gaps = 147/923 (15%) Query: 7 WLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----- 59 WL +H++ ++ +++ L +GLE E + + E P + KVL+ R+P+ Sbjct: 8 WLAEHVEIPEGLTAQELAAALVKVGLEEETIHSAEVTGPVVVGKVLA--RSPEKQKNGKV 65 Query: 60 CAILRIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 R+D G+H + ++CGA N VG + PG+ +P ++ Sbjct: 66 VNYCRVDVGEHNDAPGTGKEPSDLPSRGIICGAHNFDVGDYVAVSLPGAVLP-GGFAISA 124 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDA---------PVGGRLSDYLELSDPII 157 RK G S GM+CS EL L +D I+ L VG + YL + + Sbjct: 125 RKTYGHLSDGMICSALELGLGEDHDGIIVLAAAGDDEAVKKLPGVGCDVLPYLGIGGETL 184 Query: 158 DVSLTPNRSDCIGVRGIALD--------LVAAGLGKLKEINISCPLSSESIPLEIK---- 205 ++++TP+R C +RG+A + GL + ++ + +++SIP + + Sbjct: 185 EINITPDRGYCFSMRGVAREYHHSTGGAFTDRGLPESRQNFLDPGETADSIPSDTENGFA 244 Query: 206 FDLDDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSL 258 ++ D S G C V+G+ +P W+R RL A G+R IS VD TNYV L Sbjct: 245 VEVRDGSPIHGNVGCDRFVTRIVRGIDPKAESPKWLRDRLTAAGMRPISLAVDATNYVML 304 Query: 259 DRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG--RIQSIAGI 316 D G P H +D ++ + VRRA +GE+ LD+ E L P++++I DG R+ IAG+ Sbjct: 305 DLGQPLHAYDLDKMRGPIVVRRARAGERHTTLDDVERTLDPEDLLITDDGAERVLGIAGV 364 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKH 375 +GG T +VL+E A +DP++IARS + + +++ RFERG D + + PV ++ Sbjct: 365 MGGADTEITGETVNVLIEAAHFDPVSIARSARRHKLASEASKRFERGADPE-LPPVAAQN 423 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 +V L++ GGTA D P F SEV+RL+G+D+ E + +L +G V Sbjct: 424 VVDLLVKYGGGTAGDEVFDLRNFPAPEAQDFRLSEVERLTGLDLSDERIIGVLREIGCEV 483 Query: 436 -------------------------------------IGEYDKFEVSVPSWRQDVEEKAD 458 G V+ P+WR D+ A Sbjct: 484 EVPEDGASGASGESNADRPAPAGNGSGDVEETENGASTGGEKTVRVTPPTWRPDLIGPAH 543 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 VEE+ R+ G D+I P+ L + R ++ Q R R LA + ++V+++ FIS Sbjct: 544 FVEEVARLVGYDEI---PVRLPRANVGRGITAVQRARRDAARTLAEQGWVQVLSYPFISA 600 Query: 519 ---EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 E+ + G +R L + NP+ D +R+S+L LL+ NV R+ A+FE Sbjct: 601 DALERQGIAAGDERRRLLRLANPLQEDAPYLRSSILDSLLETARLNVSRSNPSVAVFEQG 660 Query: 574 HVYEND-----TPEG-------------------QKYMAAGIRKGSSGIEGSG---RLWS 606 V + + P G Q + AG+ G G W Sbjct: 661 LVTQPENLVPAAPAGVGARPSDAELKALHCAIPSQPHHVAGVACGPKAPAAYGYAPEPW- 719 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 D DA A SV +D + + W HPGR I++ +GY Sbjct: 720 ----------DWRDAIEAAFSVAA-CAGVDVVAEAAECAPW-HPGRCARIQSKDGRTVGY 767 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK----KVVHLSSLHPVKRDLAF 722 GE P + +GL FEV +D++ ++ + + +V +++ K D+A Sbjct: 768 AGELAPAVCKAWGLPARSVAFEVDMDALTGAESGKATSSFAPLEVKPVTTAPAAKEDIAL 827 Query: 723 IVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 +VD + A + N+I K L++ +FDV+ G +G+GKKS+A + + T + Sbjct: 828 VVDSDVTAAQVENVIRKAAGDLLESAVLFDVYTGDQVGKGKKSLAFALRFRS-DHTLTAE 886 Query: 782 DIRILMDRIVENVVKKTNAVLRS 804 + + RIV+ +K+ A LR+ Sbjct: 887 ETAGVRKRIVK-AARKSGAELRA 908 >gi|114566622|ref|YP_753776.1| phenylalanine--tRNA ligase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337557|gb|ABI68405.1| phenylalanyl-tRNA synthetase beta subunit [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 683 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 207/661 (31%), Positives = 342/661 (51%), Gaps = 29/661 (4%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 D ++++ LTPNR DC+G+ +A ++ A +L+ I ++E + IK ++ L Sbjct: 41 DTVLELDLTPNRGDCLGLINLAREVSALNGQELRIPEIQIKPAAEKVEDYIKVEITARDL 100 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C +A VK V +P WM++ L G+R I+ +VDITNYV L+ P H FD + + Sbjct: 101 CPRYAARLVKNVSIKESPEWMQEALINSGIRPINNIVDITNYVMLETNQPLHAFDYNLLG 160 Query: 274 DV--LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 D + VRRA GEK LD E L + +VI + ++AGI+GG ++ D+T DV Sbjct: 161 DEKRILVRRAGDGEKFTTLDGVERVLDAEMLVITDGRKAVALAGIMGGANSEIQDDTCDV 220 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD- 390 L+E A + +I ++ K LG+ +DS RFE+G D++G+I L +LI L GG + Sbjct: 221 LLESANFQDTSIRKTSKRLGLRSDSSIRFEKGADIEGLIYALNRAAALIQDLAGGQVLEG 280 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 IC P + V L G D+ ++ + L+RL F++ + +F V +P +R Sbjct: 281 ICDIYPEPRTPITLTLRPERVNYLLGTDINPDEIKQYLQRLKFNLKEQDKQFLVDIPFYR 340 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D++ + DL+EE+ R+YG I P L E L+ Q + + +A +++ EV Sbjct: 341 PDIQMEVDLIEEVARLYGYGNI---PAGLPGGESSGGLNPYQKFRQRLNEFMA-QSLSEV 396 Query: 511 VNWSFIS-KEQSVLFGGGQREL----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 VN+SFI+ K+ L L +I NP+S + S MR+ LLPGLL+ RN+ R Sbjct: 397 VNYSFINPKDFDRLLLPADSPLRNVVKIANPLSEEQSVMRSLLLPGLLETIKRNLARKNQ 456 Query: 566 DFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 D A FE+ V+ N+ +K I G S W + E +D F K Sbjct: 457 DLAFFEMGQVFIPTNELLPLEKLYLGAIVTGKSEPN-----WLKQQVE----LDFFFLKG 507 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 +++ D E+ PS YHPGR+ ++ + + GE HP +L+ + + Sbjct: 508 IMEDLLQELGISDYEFKETQNPS-YHPGRTASLEVKGQEI-AVIGELHPLVLENYDIKER 565 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR- 742 FE+ ++ + +K + + S V+RD+A ++DQ I A ++++IK ++ Sbjct: 566 ASAFELDVEKLFTLLGAASKMESI---SRYPAVERDIAILLDQEIKASQVLSVIKGMNNP 622 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ D+ +FD++ G + +G+KSVA + + Q + T D ++ MD I+E + K+ AVL Sbjct: 623 LLYDLKLFDLYSGTQVTKGQKSVAFKAIFQSAERTLTDAEVNHSMDSILEQLKKQLGAVL 682 Query: 803 R 803 R Sbjct: 683 R 683 >gi|269925887|ref|YP_003322510.1| phenylalanyl-tRNA synthetase, beta subunit [Thermobaculum terrenum ATCC BAA-798] gi|269789547|gb|ACZ41688.1| phenylalanyl-tRNA synthetase, beta subunit [Thermobaculum terrenum ATCC BAA-798] Length = 809 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 244/838 (29%), Positives = 403/838 (48%), Gaps = 69/838 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ +SWL+++++ S+E++ TLT GLEVE ++ + + VL VE++P+ D Sbjct: 1 MRVPVSWLREYVEFSCSIEELAHTLTIAGLEVENIERIGQEWENIYVGLVLQVEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI------PENNMIVNVRKIRGI 112 + ID G H ++ +V GAPN+ G A G+ + + KIRGI Sbjct: 61 RLQVAHIDYG-HGQVSIVTGAPNIAPGQKVALALAGATLVDPYSDQHKTFKLKPSKIRGI 119 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 S M CSEKEL L +D I+ L +APVG +L D L D I+D++LTPN S + Sbjct: 120 LSEAMACSEKELGLGEDHTGILVLDPEAPVGAKLQDVL--GDHILDIALTPNFSYANSIV 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD--LDDSSLCKGFAMCCVKGVRNNVA 230 GIA ++ A K K P+ + + ++ D ++ L + + + +R + Sbjct: 178 GIAREVAALTGTKAK-----VPVPNVELSGDVGVDAWVESEDLAARYMLQRLDNIRIGPS 232 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 +R+RL G+R ++ +VDITNYV L+ G P H FDA ++ + VR + E++ + Sbjct: 233 SAKIRRRLLLCGMRPVNNVVDITNYVMLELGQPLHPFDADKVRGKVAVRSSYPEEQLETI 292 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+Q PD ++IA D + + AGI+GG + D+T ++L+E A ++ I R+ + L Sbjct: 293 DHQLRTAPPDTIMIADDEKPIAFAGIMGGLNTEVTDDTRNILLESATFNAPRIRRAARLL 352 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV-FMNS 409 G+ +++ RFE+G+D + L V L+ CG K R + F Sbjct: 353 GLRSEASSRFEKGMDPELAGLALARAVELLQQECGAQPKGAPFDWYPNPKKRAYIDFPVY 412 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 EVKRL GID+P + RIL L F V E D +V PS+R DV AD+VEE+ RI+G Sbjct: 413 EVKRLLGIDIPKDQVERILTSLEFEVQEEGDLLKVLPPSYRSDVSIPADIVEEVGRIWGY 472 Query: 470 DQIKSE------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS----KE 519 +++ S+ P LT R +++ + LA+ + EV+N+ IS + Sbjct: 473 EELPSQLPGGTIPFNLTD----RFFWIEKKAREW----LAAAGLQEVINYDLISARLISK 524 Query: 520 QSVLFGGGQRE---------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + L+ G ++++NP S + +R SL+PGLL+ N+ R + I+ Sbjct: 525 MASLYHEGMHPPVWRPLDEVIKVINPTSPEREYLRPSLIPGLLQNVSDNL-RFVDKVWIY 583 Query: 571 EVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 E+ V+ + P+ K +A I +G W +FD K Sbjct: 584 ELDRVFIKANGERPQEPKRLA---------IAMAGTRWPISPHLPQAKTTIFDLKG---- 630 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS-AEIVLGYFGEFHPNILDFFGLSNPICG 686 I+ F+ + E PS P +++ S VLG + P +L + + Sbjct: 631 TIQAFLHYLGIEVEM-LPSQLGPDAVNVLQVSVGGNVLGNIFQVDPTLLRDLDIDEDV-- 687 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 F LD I Q R + VH+S V++DLA +V IPAG + +I R L+ Sbjct: 688 FVAELDWEQIKQHARLD-RNYVHVSRYPIVRQDLAVLVSASIPAGNVTRVIWEQGRPLLV 746 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +V+QG + EG KS+ ++ Q T +++ + +I + + +A +R Sbjct: 747 QCELAEVYQGDQIPEGTKSLLYKLAFQAEDRTLTEEEATKVRQKIENALRSEVDAKIR 804 >gi|315302775|ref|ZP_07873544.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] gi|313628854|gb|EFR97218.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria ivanovii FSL F6-596] Length = 802 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 224/824 (27%), Positives = 416/824 (50%), Gaps = 43/824 (5%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPD- 57 M + +W+K+ + +S E++ + +T G+E+E V+ A L + +VL+ ER+P+ Sbjct: 1 MLVSYNWVKEFFEEFPLSAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLTCERHPNA 60 Query: 58 --LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 L+ I++ D + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCIVQTD--EAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVSE 117 Query: 116 GMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GM+CS EL + I LP VG L L D I+D+++TPNR+D + Sbjct: 118 GMICSLAELGFESKVVPKAYAEGIYVLPEHVEVGVSAIRLLGLDDAILDMAITPNRADAL 177 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRN 227 + G+A ++ A + K + P SE + + ++++ +A+ V+ + Sbjct: 178 SMTGVAHEVGA--IIHQKPAQPTQPDVSEKGKADSFLTVEVENPMETPYYAIKMVENITI 235 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E+ Sbjct: 236 KESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIIVRSAKEQEE 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD ++ L + VI + +IAG++GG+ + NTT V +E A++ +I ++ Sbjct: 296 ITTLDGEKRKLQAGHTVITNGTDPIAIAGVMGGESSEVTANTTTVALEGAIFSSSSIGKA 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIV 405 + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 356 SRELYLRTEASIRYDKGSDAFKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAINKIE 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + + R+ G + + + I RLGF + + D + VPS R D+ +AD++EE+ R Sbjct: 416 TSLTRINRILGTAITLSEIETIFNRLGFVLEVKEDTLMIEVPSRRWDITIEADILEEVAR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 476 IYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRLA 532 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDTP 581 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 533 LSNEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDNL 592 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC-RFVDLFDAKADALSVIEPFVSLDSLRF 640 ++ AG+ G+ W + ++ + VD F K +++ L + Sbjct: 593 PIEQEHLAGLITGN---------WHEADWQKTPKPVDFFVLKGIVEGLVKKLGIKAELVW 643 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + HPGR+ I + + GY G HP + L FE+ ++++ + K+ Sbjct: 644 KQTEKEELHPGRTASIYIEGKEI-GYLGGVHPAVEANADLKETYV-FELNVEALLGAAKE 701 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + + + + RDLA +VD++ T+ +IK + +L+ D+ +FD+F+G+SLG Sbjct: 702 KVVYQPIPRYPEM---TRDLALLVDKNTNHATIAEVIKAHGGKLLVDIELFDIFEGESLG 758 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 E KKS+A + + T ++D++ ++++V+ + +K NAV+R Sbjct: 759 ENKKSLAYTLTFLDSERTLVEEDVQKAINKVVDALQEKLNAVIR 802 >gi|256843603|ref|ZP_05549091.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] gi|256615023|gb|EEU20224.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus 125-2-CHN] Length = 806 Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 230/814 (28%), Positives = 403/814 (49%), Gaps = 43/814 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD LD D ++ + +T G+E+ ++V + L + +VL E Sbjct: 1 MLVSYNWLKDFLDLDGQDPYELAEEITRSGVEIPDRVHPMDGLKKLVVGRVLDCEGVEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+ Sbjct: 61 HLHLTHVDVGEDEPLQIVCGAPNVAAGEDVIVALHGARIAGNEKIKK-GKIRGMESYGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +E+ SD I P DA V G + + L + D I++ +TPNR+D +G Sbjct: 120 CGLQEIGFSDSVVPQEFVDGIYVFPADAEVKPGQDVYEALGMDDYILNFDITPNRADTLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + ++ L + D+ D L F + ++ V+ Sbjct: 180 MEGAAYE-VGAIINQKPKVEEKVVLKEDGPAWTDSLDVKVDEKLAPKFYLRKLENVKIQD 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 239 SPLWLQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P +++I + +AG++GG + TTDV++E A++DP + ++ Sbjct: 299 LLNEKEVDLDPKDIIITDGKKPVMMAGVMGGLDSEITSETTDVILESAIFDPTLVRKAAL 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + +P + Sbjct: 359 RHANRTEASSRYEKGVNWDATEKAINMAALLLRNDADATVDEGILKATDQKREPVVVKTT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + ++ G + +++ ++I +RL F V + D V VP+ R D+ ADLVEE+ R+Y Sbjct: 419 ASYLNKVLGTKLSVDEIVKIFDRLCFKVDVDGDNLAVHVPNRRWDISIPADLVEEVGRLY 478 Query: 468 GVDQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G D ++S +P LP T S ++ R +K ++ + +ME +++S S E++V + Sbjct: 479 GYDNLESTQPVLPETH----GGYSEKEEMMRRMKAIVEGQGLMEAISYSLSSPEKAVRYT 534 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 +EL E+ +P+++ S MR +L+ GL+ A N R A+FE Y++D + Sbjct: 535 KDPKELVEVKSPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRTYDHDGGKFN 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 +++AA SG +++ + + VD + K ++ + + + +E Sbjct: 595 EHEHLAAIY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFNAIGIDPEKVVYE 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HP-NILDFFGLSNPICGFEVYLDS-IPISQ 698 + HP R+ I + V G G H I D + + G+E+ LD+ IP+ Sbjct: 646 AKGIKGMHPTRTAGIYIDKQYV-GMIGMIAHAVTIADKALRGSELYGYEIDLDTIIPM-- 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK V ++RDL+ +VD+ + + N+IK N + + ++ V DV+ G Sbjct: 703 --LTKGVTAVPAPKFPAIQRDLSLLVDKPVTNQEIENVIKSNAGKYLTELKVIDVYAGAH 760 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + GKKS+A + KDT DD + MD+IV Sbjct: 761 IDVGKKSIAYNLTFLNRKDTLTDDVVNNAMDKIV 794 >gi|323692443|ref|ZP_08106678.1| phenylalanyl-tRNA synthetase [Clostridium symbiosum WAL-14673] gi|323503495|gb|EGB19322.1| phenylalanyl-tRNA synthetase [Clostridium symbiosum WAL-14673] Length = 806 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 244/838 (29%), Positives = 401/838 (47%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGYECLDKNLEKIVVGQITKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNV---------RVGLLGVWAPPGSCIPENNMIVNVRK 108 D I+ +++ G+ + IQ+V GAPNV R G G +PE+ + + K Sbjct: 61 DKLIICQVNVGE-ESIQIVTGAPNVKEGDKVPVVRDGGRVAGGHDGGPLPEDGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKEL-----MLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RGIES GMMCS +EL M D S I LP D VG + L L D + + +T Sbjct: 120 LRGIESYGMMCSIEELGSSREMYPDAPESGIYILPDDCEVGADAVEILGLRDVVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V G+A + A K ++ +SE I ++ ++D+ LC + V Sbjct: 180 SNRVDCYSVIGVAREAAATFNKKFMPPVVTETGNSEDIHDYLEVSVEDTGLCPRYCARMV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 K ++ +P WM++RL A G+R I+ +VDITNYV + G P H FD +I + V+ A Sbjct: 240 KNIKIAPSPVWMQRRLAASGIRPINNIVDITNYVMEEYGQPMHAFDYDQIGGHKIIVKCA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+ LD QE L ++I + IAGI+GG+++ DN ++ E A +D Sbjct: 300 KDGDVFQTLDGQERKLDSRVLMINDAEKEVGIAGIMGGENSKITDNVKTMVFEAACFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + + Sbjct: 360 NIRLSSKRVGLRTDASGKFEKGLDPNTAKAAIDRACQLIEELGAGEVVGGIIDVYPVKRE 419 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKAD 458 ++ F ++ RL G D+ + L L R+ +YDK EV VPSWRQD+ AD Sbjct: 420 GNRVKFEPEKINRLLGTDIAADTMLEYLGRVEL----DYDKETGEVIVPSWRQDIHCMAD 475 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EE+ R YG D I + LP + + LS + +++ + + +SF Sbjct: 476 LAEEVARFYGYDVIPTS-LPTGEATTGK-LSFKLRVEEVARKIAEFSGFSQSMTYSF--- 530 Query: 519 EQSVLF--------GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 E +F G + + I NP+ D S MRT L G+L + N +R D ++ Sbjct: 531 ESPKVFDKLMLPADSGFRNAITISNPLGEDFSIMRTLPLNGMLTSLSTNYNRRNKDVRLY 590 Query: 571 EVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFDAKADALS 627 E++ +Y + P + + ++ + G+ GSG ++ K EE F D K Sbjct: 591 ELATIYIPKELPLAE--LPDERQQFTLGMYGSGDFYTMKGVVEE---FFDKIGMKK---- 641 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +P + ++ ++ HPGR I V GY GE HP++ D + L + Sbjct: 642 --KPHYNPEA------GKAFLHPGRQAEIIYDGTSV-GYLGEIHPDVADNYKLGEKT--Y 690 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 LD +P T K ++ V RD++ ++ + I AG + +II+ ++++ Sbjct: 691 VAVLD-MPSILPNATFDHKYTGIAKYPAVTRDISMVMKKEILAGQVEDIIEQRGGKILES 749 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD+++G + G KS+A + + T D ++ +M++I+ N ++ LRS Sbjct: 750 YKLFDIYEGSQITAGYKSIAYSITFRANDHTLEDKEVNTVMNKIL-NGLQGLGIELRS 806 >gi|229825567|ref|ZP_04451636.1| hypothetical protein GCWU000182_00928 [Abiotrophia defectiva ATCC 49176] gi|229790130|gb|EEP26244.1| hypothetical protein GCWU000182_00928 [Abiotrophia defectiva ATCC 49176] Length = 812 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 255/853 (29%), Positives = 410/853 (48%), Gaps = 90/853 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M LSW+K+ + + D S + D +T G + E V+ E L + K+ +E++PD Sbjct: 1 MNTPLSWIKEMVPELDCSPAEYMDAMTLSGTKAESVEYFDENLDKIIVGKINKLEQHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG---SCIPENNMI-----VNV 106 D C + + GK E+Q+V GAPNV G + G +C N + Sbjct: 61 DKLVICQVQVDEAGK--EVQIVTGAPNVFEGAVVPVVLDGGKVACDHSGNRTAGGFEIKA 118 Query: 107 RKIRGIESTGMMCSEKELML-------SDDSASIMELPIDAPVGGRL-SDYLE---LSDP 155 K+RG++S GMMCS EL +D+ + I+ +L SD LE L D Sbjct: 119 GKLRGVDSYGMMCSIDELGRDKTYYPEADEEGLYIFNKIEGGSELKLGSDALEALGLRDA 178 Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 +++ +T NR DC G+ GIA + A + K I +SE I ++ D+ LCK Sbjct: 179 LVEYEVTSNRVDCFGIEGIAREAAATFRKEFKPPVIKETGNSEKAEDYISVEIKDNDLCK 238 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD- 274 F VK V+ +P WM++RL +VG+R I+ +VDITNYV + P H +D S I D Sbjct: 239 RFVARVVKNVKIAPSPLWMQRRLSSVGIRPINNIVDITNYVMTEMSQPMHAYDLSTIEDR 298 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLV 333 + V RA GEK LD +E +L D V++ DG+ IAGI+GG+++ +DN VL+ Sbjct: 299 KIIVERAAKGEKFTTLDGEERELD-DTVLLIKDGKKAVGIAGIMGGENSKINDNLNTVLL 357 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D NI S K +G+ TD+ +FE+G+ + + LI + G + Sbjct: 358 EAACFDGTNIRLSSKKVGLRTDASGKFEKGLHPNTALLAMNRACQLIEEIGAGEVVGGVV 417 Query: 394 ARNITYK-PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 + R + F RL G D+ E++ +RL + D V+VP +RQD Sbjct: 418 DVYPVKEGDRTVEFDLDACNRLLGTDISREEAAEYFKRLEIKI--NDDGKTVTVPYFRQD 475 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVV 511 + AD+ EE+ R +G D+I P L E Q R LA + E + Sbjct: 476 LLRNADIAEELARFFGYDKI---PTTLPSGESTAGGETLQMEIEGKARALAEQFGFCEGM 532 Query: 512 NWSFISKE--QSVLFGGGQRELE---ILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 +SF S + + +L +E E I+NP+ D S MRT ++ G+L + G N R + Sbjct: 533 TFSFESPKVFEKLLLPEDAKERETIKIMNPLGEDYSIMRTQIVNGMLTSLGTNSARRNKN 592 Query: 567 FAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 ++E+S++Y D PE +K G+ G G D F Sbjct: 593 VRLYEISNIYLAKKLPLEDYPEEKKQFCLGMY-------GEG--------------DFFV 631 Query: 621 AKADALSVIEPFV------SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 K V+E F+ L S + ++G ++ HPGR I E V GY GE HP + Sbjct: 632 LKG----VVEEFLYKVGMKKLPSYKAQAGK-TFLHPGRQADIIYDGEPV-GYLGEVHPLV 685 Query: 675 LDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 + +G+S Y+ +I +S+ +K + K ++ V RD++ I+ + + AG Sbjct: 686 QETYGISE-----RAYIANIDLSKICEKADFSVKYEGIAKFPSVVRDISLIMSKSLTAGE 740 Query: 733 LVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + +I+ N +++ + +FD+++G+ +G KKS+A + + + T D +I +M+ I+ Sbjct: 741 IEEVIRTNGGNILESLGLFDIYEGERIGADKKSMAYSITFRNKEKTLEDAEITAVMENIL 800 Query: 792 ENVVKKTNAVLRS 804 + ++ AVLRS Sbjct: 801 KG-LEHIGAVLRS 812 >gi|154500517|ref|ZP_02038555.1| hypothetical protein BACCAP_04190 [Bacteroides capillosus ATCC 29799] gi|150270748|gb|EDM98044.1| hypothetical protein BACCAP_04190 [Bacteroides capillosus ATCC 29799] Length = 799 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 234/802 (29%), Positives = 392/802 (48%), Gaps = 64/802 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WL + +D V ++ CD +T G +VE V + + + KVLS+ER+P+ D Sbjct: 1 MDLSRKWLTEFVDVSVGDKEYCDAMTLSGSKVEGVTVEGQEIKNVVVGKVLSMERHPNSD 60 Query: 60 CA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G + +Q+V GA NV VG L A S +P ++ + K+RG S GM+ Sbjct: 61 HMWICQVDVGG-ETVQIVTGAQNVSVGDLVPVAKDDSWLP-GDVHITAGKLRGEVSNGML 118 Query: 119 CSEKELMLSD--------DSASIMELPIDAPV-----GGRLSDYLELSDPIIDVSLTPNR 165 CS KEL ++D D I++ D G + L L+D I++ +TPNR Sbjct: 119 CSYKELGMTDHDWPHSVVDGIFILQSDPDLAAKNPQPGDDIPTLLGLNDHIVEFEITPNR 178 Query: 166 SDCIGVRGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCC 221 DC+ V G+A + A K +++ P SI + +++D LC + Sbjct: 179 PDCLSVIGLARETAAT---FDKPLSLHTPEVKGTDGTSIAELLDVEIEDPELCPRYTARM 235 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRR 280 V+ V+ +P WMR+RL+A G+R I+ +VDITNYV L+ G P H FD S + + VR Sbjct: 236 VRNVKIAPSPLWMRERLRASGVRPINNIVDITNYVMLEYGQPMHAFDFSCVDGGKIVVRT 295 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 A GE I LD + L+ + I + + +AG++GG ++ +T V+ E A ++ Sbjct: 296 AREGEVIQTLDGNDRKLTTSMLCICDEHKPVGVAGVMGGANSEIVGDTAMVVFESANFNG 355 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITY 399 ++I R+ LG+ TD+ R+E+G+D ++ L+ L CG + Sbjct: 356 VSIRRTATALGMRTDASARYEKGLDPMNTYKGVQRACELVELLGCGEVIDGVIDVIAADQ 415 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 PR + ++ L G D+ E+ +L+RL F++ G+ + VPSWR DVE +D+ Sbjct: 416 NPRTVKLEPEKINGLLGTDISEEEMRAMLKRLDFTLDGD----TIIVPSWRSDVEHYSDI 471 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 EE+ R++G D+I P+ L + E + + +Q R + + E++ +SFIS Sbjct: 472 AEEVARLHGYDKI---PVTLMKGETTQGGYTEKQKAERKLGTLCRGFGFSEIITYSFISP 528 Query: 518 ----KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 K + ++ + ILNP+ D S MRT+ LP +L+ RN ++E++ Sbjct: 529 SYYDKIRLPADSPKRKSVTILNPLGEDTSVMRTTALPSMLETLARNFSYRNKSAKLYELA 588 Query: 574 HVYENDTP-EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY TP EGQ +A + S G G G +D F K A+ I Sbjct: 589 TVY---TPVEGQD-LADEEQMLSLGAYGDG-------------MDFFTFKG-AVEAILAA 630 Query: 633 VSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +++ ++ FE+ + +HPGR +K + ++LG FG+ HP +G+ + ++ Sbjct: 631 MNVKNVTFEARSDIGAFHPGRCAEVKANG-VMLGVFGQLHPLTAQNYGMDCDVFAAQLQF 689 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVF 750 + +R + L V RD+A + D + L I K L+ +V +F Sbjct: 690 ADM---MAQRAPEARYEPLPRFPSVTRDIAVVCDAAVTVAQLEECIFKGAKGLLKEVELF 746 Query: 751 DVFQGKSLGEGKKSVAIQVLIQ 772 D++ G + GKKSVA ++++ Sbjct: 747 DIYTGAPIPAGKKSVAFNLVLR 768 >gi|323484429|ref|ZP_08089795.1| hypothetical protein HMPREF9474_01546 [Clostridium symbiosum WAL-14163] gi|323402207|gb|EGA94539.1| hypothetical protein HMPREF9474_01546 [Clostridium symbiosum WAL-14163] Length = 806 Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 244/838 (29%), Positives = 401/838 (47%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGYECLDKNLEKIVVGQITKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNV---------RVGLLGVWAPPGSCIPENNMIVNVRK 108 D I+ +++ G+ + IQ+V GAPNV R G G +PE+ + + K Sbjct: 61 DKLIICQVNVGE-ESIQIVTGAPNVKEGDKVPVVRDGGRVAGGHDGGPLPEDGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKEL-----MLSDDSAS-IMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RGIES GMMCS +EL M D S I LP D VG + L L D + + +T Sbjct: 120 LRGIESYGMMCSIEELGSSREMYPDAPESGIYILPDDCEVGADAVEILGLRDVVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V G+A + A K ++ +SE I ++ ++D+ LC + V Sbjct: 180 SNRVDCYSVIGVAREAAATFNKKFMPPVVTDTGNSEDIHDYLEVSVEDTGLCPRYCARMV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 K ++ +P WM++RL A G+R I+ +VDITNYV + G P H FD +I + V+ A Sbjct: 240 KNIKIAPSPVWMQRRLAASGIRPINNIVDITNYVMEEYGQPMHAFDYDQIGGHKIIVKCA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+ LD QE L ++I + IAGI+GG+++ DN ++ E A +D Sbjct: 300 KDGDVFQTLDGQERKLDSRVLMINDAEKEVGIAGIMGGENSKITDNVKTMVFEAACFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + + Sbjct: 360 NIRLSSKRVGLRTDASGKFEKGLDPNTAKAAIDRACQLIEELGAGEVVGGIIDVYPVKRE 419 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKAD 458 ++ F ++ RL G D+ + L L R+ +YDK EV VPSWRQD+ AD Sbjct: 420 GNRVKFEPEKINRLLGTDITADTMLEYLGRVEL----DYDKETGEVIVPSWRQDIHCMAD 475 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L EE+ R YG D I + LP + + LS + +++ + + +SF Sbjct: 476 LAEEVARFYGYDVIPTS-LPTGEATTGK-LSFKLRVEEVARKIAEFSGFSQSMTYSF--- 530 Query: 519 EQSVLF--------GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 E +F G + + I NP+ D S MRT L G+L + N +R D ++ Sbjct: 531 ESPKVFDKLMLPADSGFRNAITISNPLGEDFSIMRTLPLNGMLTSLSTNYNRRNKDVRLY 590 Query: 571 EVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFDAKADALS 627 E++ +Y + P + + ++ + G+ GSG ++ K EE F D K Sbjct: 591 ELATIYIPKELPLAE--LPDERQQFTLGMYGSGDFYTMKGVVEE---FFDKIGMKK---- 641 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +P + ++ ++ HPGR I V GY GE HP++ D + L + Sbjct: 642 --KPHYNPEA------GKAFLHPGRQAEIIYDGTSV-GYLGEIHPDVADNYKLGEKT--Y 690 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 LD +P T K ++ V RD++ ++ + I AG + +II+ ++++ Sbjct: 691 VAVLD-MPSILPNATFDHKYTGIAKYPAVTRDISMVMKKEILAGQVEDIIEQRGGKILES 749 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD+++G + G KS+A + + T D ++ +M++I+ N ++ LRS Sbjct: 750 YKLFDIYEGSQITAGYKSIAYSITFRANDHTLEDKEVNTVMNKIL-NGLQGLGIELRS 806 >gi|7630281|gb|AAF65167.1|AF201682_1 phenylalanyl-tRNA synthetase chain B [Mycobacterium marinum] Length = 776 Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 233/786 (29%), Positives = 385/786 (48%), Gaps = 75/786 (9%) Query: 65 IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL 124 +D G+ + ++VCGA N VG L V A PG+ +P IV VRK G +S GMMCS EL Sbjct: 20 VDFGEGEGREIVCGATNFAVGDLVVGALPGTILPSGFEIV-VRKTYGRKSKGMMCSAAEL 78 Query: 125 MLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-G 182 L + + I+ LP A G +D L D + +++TP+R C+ +RG+A ++ A Sbjct: 79 GLGAEHSGILVLPSGTAQPGAAAADILGFDDVVFHLAITPDRGYCMSIRGLAREIACAFD 138 Query: 183 LGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVAPNWMRQRLKA 240 L + +++ P E+ PL + + + + FA+ V G+ V+P W+++RL Sbjct: 139 LDFVDPADVAPLPAEGEAWPLNVHPE----TGVRRFALRPVTGIDPGAVSPWWLQRRLLM 194 Query: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 G+R S VD+TNYV L+ G+P H D +RIS +VR A GE ++ LD+ E L P Sbjct: 195 CGMRVTSPAVDVTNYVMLELGHPMHAHDRNRISGAFSVRFARPGETVVTLDDVERRLDPT 254 Query: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +V+I + +I G++G ++TDVL+E A+WD ++R+ + L + +++ R+ Sbjct: 255 DVLIVDEVATTAIGGVMGAASTEVRGDSTDVLLEAAIWDAAAVSRTQRRLHLPSEAARRY 314 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-----ARNITYKPRKIVFMNSEVKRLS 415 ER VD + L +L+ + GG S + P I R + Sbjct: 315 ERSVDPAVSVAALDRCAALLADIAGGAVSPTLTDWRGDPPRDDWSPPPIRIDADLPDRFA 374 Query: 416 GIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G+ + R L ++G V + + V+ PSWR D+++ ADLVEE++R+ G++ I S Sbjct: 375 GVVYGPGTTARRLAQIGAEVLVDDQAALTVTPPSWRPDLQQPADLVEEVMRLEGLEAIPS 434 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-----QR 529 L R L+ Q R R + + LA E++ F+ L+G + Sbjct: 435 V---LPSAPAGRGLTAGQRRRRAIGKSLALSGFTEILPTPFLPAGVFDLWGLAADDPRRA 491 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE------------ 577 ++NP+ AD + T+LLP LL+A GRNV R +AD A++ V+ V + Sbjct: 492 TTNVVNPLEADRPQLATTLLPALLEALGRNVSRGLADVALYAVAQVVQPTDQTRGIELIP 551 Query: 578 --------------NDTPEGQKYMAA---GIRKGSSGIEGSGR-LWSDKSEERCRFVDLF 619 P +++AA G+R+ G G GR + + + E R + Sbjct: 552 VHRRPTDGEIAALDASLPRQPQHVAAVLTGLRE-PRGPWGPGRAVEAADAFEAVRII--- 607 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 A+A A+ V+ LR P +HPGR + E V+G+ G+ HP +++ G Sbjct: 608 -ARASAVDVM--------LRATQHLP--WHPGRCAEVLVG-EAVVGHAGQLHPAVIERAG 655 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 L C E+ LD+IPI +T +S V +DL+ +V + A + + +++ Sbjct: 656 LPKGTCALELNLDAIPI-----VETLPAPRVSPFPAVFQDLSLVVAADVSAQMVADAVRD 710 Query: 740 -VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 L++D+ +FDVF G +G+ +KS+ + + T +DD D V+ ++ Sbjct: 711 GAGDLLEDLQLFDVFTGPQIGDNRKSLTFALRFRAPDRTLTEDDASAARDAAVQCAAQRV 770 Query: 799 NAVLRS 804 AVLRS Sbjct: 771 GAVLRS 776 >gi|314978787|gb|EFT22881.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL072PA2] gi|315089183|gb|EFT61159.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL072PA1] Length = 839 Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 245/866 (28%), Positives = 397/866 (45%), Gaps = 89/866 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 T + + + PR+++ ++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQMINVDLP-NRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVA 468 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 469 PTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEAG 525 Query: 507 MMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 526 FVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMS 585 Query: 562 RAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS-- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 586 RSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWL 645 Query: 602 GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 646 PDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIVD 697 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K D Sbjct: 698 GK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKED 753 Query: 720 LAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 754 VALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRTL 813 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 814 TDSEALETRDAAVARAEETCGAQLRS 839 >gi|88803276|ref|ZP_01118802.1| phenylalanyl-tRNA synthetase beta subunit [Polaribacter irgensii 23-P] gi|88780842|gb|EAR12021.1| phenylalanyl-tRNA synthetase beta subunit [Polaribacter irgensii 23-P] Length = 808 Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 251/843 (29%), Positives = 400/843 (47%), Gaps = 75/843 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK L D K + LT +GLEVE ++ +EA L + ++L+ ++P Sbjct: 1 MKISYNWLKQFLQIDWDAIKTGELLTDLGLEVEGIETKEAIKGGLKGIVVGEILTCIQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI---VNVRKIRGI 112 + D + +D G +Q+VCGA NV VG A G+ + ++ + + KIRG Sbjct: 61 NADRLKVTTVDLGLGIPVQIVCGAANVTVGQKVPVATIGTTLYDDKGVGFKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L IM L G +++ ++ D I ++ LTPNRSD + Sbjct: 121 ESHGMICAEDELGLGTGHDGIMVLEATLKPGVAVAEVFKIEIDEIFEIGLTPNRSDAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIP------LEIKFDLDDSSLCKGFAMC--CVK 223 G+A DL A L + +I+ L S S+ ++FD++ C + Sbjct: 181 FGVARDLRAG----LMQQDINLELISPSVSDFHVDERTLRFDVEIEKREHAPRYCGISIT 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 V +P W++ +LKA+G+ + +VDITNYV + G P H FDA +I + + V+ Sbjct: 237 DVTIKDSPEWIQNKLKAIGITPKNNIVDITNYVLHELGQPLHAFDAQKIKGNKILVKTLQ 296 Query: 283 SGEKILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G K LD E LS ++++I SD IAG+ GG + ++TT + +E A ++P+ Sbjct: 297 EGTKFTTLDGVERTLSSEDIMICDSDATPLCIAGVFGGSISSVSEHTTSIFLESAYFNPV 356 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYK 400 I ++ K + TD+ +RFERG+D+ LK LI GG SDI + Sbjct: 357 FIRKTAKRHALNTDASFRFERGIDINLTKYALKRAALLIKEYSGGKMGSDIS-----DFY 411 Query: 401 PRKI----VFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVE 454 P KI VF++ E RL G ++P E +IL L + E + +++PS+R DV+ Sbjct: 412 PEKIEDYQVFLSYENAYRLIGQEIPKETIKKILASLEIKINSETEGGLGLTIPSYRTDVQ 471 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK------RVLASRAMM 508 +AD++EEILR+YG + I + K N S+ +Y K L S Sbjct: 472 READIIEEILRVYGYNNI--------EFSHKLNTSVSFDFNKYTKIENVTSNHLTSLGFN 523 Query: 509 EVVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 E + S + L Q E + I+NP+S D+ +R S+L L++ N++R Sbjct: 524 ETMANSLTKPAYAELSENIQEEASVAIVNPLSNDLKVLRQSMLFSGLESVSYNINRKNNA 583 Query: 567 FAIFEVSHVYE--NDTPEGQKYMA---AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 +E Y N+ + K++ +G R S WS ++ + VD F Sbjct: 584 LKFYEYGKTYHKFNEKYQENKHLTLFLSGNRAAES--------WSKEN----KVVDFFYL 631 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 K S+ E + +D L+ P+ GI + ++ L G +L FG+ Sbjct: 632 KGIVNSLFER-LGIDQLK---TTPTKQDIFSEGITLSLGKMKLVDLGVIKEGLLKEFGIK 687 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + + D I + K KVV L VKRDLA ++D + + N+ + Sbjct: 688 QDVLFADFNWD--LILKLTGNKNIKVVDLPKFPSVKRDLALLLDAKVEFREIYNLAFQSE 745 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 + L+ +V +FDV++G L GKKS A+ LIQ T D I +M ++ + K A Sbjct: 746 KILLKEVDLFDVYEGDKLPTGKKSYAVSFLIQDETKTLTDKQIDKVMQKLQQTFEKNVQA 805 Query: 801 VLR 803 VLR Sbjct: 806 VLR 808 >gi|328752006|gb|EGF65622.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL020PA1] Length = 839 Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVFAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|315081120|gb|EFT53096.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL078PA1] Length = 839 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEKGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|295130946|ref|YP_003581609.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes SK137] gi|291376444|gb|ADE00299.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes SK137] gi|313763454|gb|EFS34818.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL013PA1] gi|313773429|gb|EFS39395.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL074PA1] gi|313808087|gb|EFS46564.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL087PA2] gi|313811444|gb|EFS49158.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL083PA1] gi|313813588|gb|EFS51302.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL025PA1] gi|313829636|gb|EFS67350.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL063PA2] gi|313831183|gb|EFS68897.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL007PA1] gi|313834844|gb|EFS72558.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL056PA1] gi|314914613|gb|EFS78444.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL005PA4] gi|314920662|gb|EFS84493.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL050PA3] gi|314930432|gb|EFS94263.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL067PA1] gi|314957366|gb|EFT01469.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL002PA1] gi|314968372|gb|EFT12471.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL037PA1] gi|314974062|gb|EFT18158.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL053PA1] gi|314976759|gb|EFT20854.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL045PA1] gi|314984481|gb|EFT28573.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL005PA1] gi|314986658|gb|EFT30750.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL005PA2] gi|314990773|gb|EFT34864.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL005PA3] gi|315083441|gb|EFT55417.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL027PA2] gi|315095237|gb|EFT67213.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL038PA1] gi|315099082|gb|EFT71058.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL059PA2] gi|315100538|gb|EFT72514.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL046PA1] gi|315106689|gb|EFT78665.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL030PA1] gi|315108915|gb|EFT80891.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL030PA2] gi|327329584|gb|EGE71342.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL096PA2] gi|327444364|gb|EGE91018.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL043PA2] gi|327444572|gb|EGE91226.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL043PA1] gi|327446244|gb|EGE92898.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL013PA2] gi|327452805|gb|EGE99459.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL087PA3] gi|327457882|gb|EGF04537.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL083PA2] gi|328755363|gb|EGF68979.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL087PA1] gi|328760147|gb|EGF73724.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL099PA1] gi|332675826|gb|AEE72642.1| phenylalanine--tRNA ligase beta chain [Propionibacterium acnes 266] Length = 839 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|327398467|ref|YP_004339336.1| Phenylalanyl-tRNA synthetase subunit beta [Hippea maritima DSM 10411] gi|327181096|gb|AEA33277.1| Phenylalanyl-tRNA synthetase beta chain [Hippea maritima DSM 10411] Length = 787 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 242/815 (29%), Positives = 388/815 (47%), Gaps = 42/815 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT--IVKVLSVERNPDL 58 M+ + WLK+ +D DVS ++ D LT GLEV+ +D E IV V E+ Sbjct: 1 MRISYRWLKEFVDIDVSPRELADRLTMAGLEVDSIDRIETFGSVVGEIVDVSYTEK---- 56 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 A+ ++D G + I V +V VG GS + + + R S GM Sbjct: 57 -LALCKVDVG-IKTINVATADKSVEVGEKFGVVLAGSNVGDKR--IERRSFGDFVSEGMF 112 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 S +EL L + S+ + L G +LSD E D II++ LTPNR+D + + G+A D+ Sbjct: 113 LSAEELGLEESSSKLFRLDRTFENGKKLSDLDEFDDSIIEIELTPNRADALSMLGVARDV 172 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A +++ + + I I ++D C + + V AP +MR RL Sbjct: 173 AAIFKKRVRFPDAEFITIDKEIDEFIDVKIEDYKNCPRYTLALAD-VEVKPAPFFMRMRL 231 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G+RSI+ +VDITNYV L G P H FD S+++ + VR A GE ILALD +EY+L Sbjct: 232 LKCGVRSINNIVDITNYVLLGLGQPMHAFDFSKLNGNIVVRPANKGEGILALDGKEYELK 291 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 D +VIA +IAG++GG+ + D T + +E A ++P+++ + + L T+S + Sbjct: 292 DDMLVIADQKGPVAIAGVMGGELSSVSDTTKTIALESAFFNPVSVRLTARRLKFHTESSH 351 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVFMNSEVKRLSGI 417 RFERGVD + K+ + L+ I R +K ++I V +L G Sbjct: 352 RFERGVDPNLALDASKYALDLLSRYANAKVYRGFIDRKEGEFKNKRISVSFDGVNKLLGS 411 Query: 418 DVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + ++ + +L L F V E K EV VP++R D+E +AD+ EE+ RI G + I + Sbjct: 412 NYSSDEIVDVLVGLSFGV--EQTKEGVVEVDVPTYRFDIEGQADIAEEVARIKGYNSI-T 468 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 + +P+ V K ++ VK LA + E N+SF+ E+ LF G + L Sbjct: 469 DTMPVVNVYFKPKDRVEFYANESVK-TLADMGLFETKNYSFVHDERLKLFDGNENSFVYL 527 Query: 535 -NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP+ + MRT+L LL N+ + +FE+ + D ++Y+ G Sbjct: 528 KNPLIDTQNVMRTNLAVSLLDVLAFNISKGAKSVPVFEIGRSFFKDGDFCKEYINVGF-- 585 Query: 594 GSSGIEGSGRLWSDKS---EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 LW ++ R D +DAKA + V + S +E + HP Sbjct: 586 ---------LLWGLSQFSIYQKGRVFDFYDAKA-VCEAVAGIVGV-SFDYERSNRMFLHP 634 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH- 709 GRS + + LGY GE HP++ + L V + I +S+ +++ Sbjct: 635 GRSAELVVDGK-SLGYVGELHPDLYTAYELKFD-KKVRVLIGEINLSRLAEMNVGHLMYE 692 Query: 710 -LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 L L V RDLA +VD+ I + +KN++ + V +FD++ K E K S+ + Sbjct: 693 GLPKLPTVWRDLAIVVDRAIRWSDIEREVKNIEGVY-RVALFDIYD-KLEDETKVSLTFR 750 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V+++ + TF +D+I +M + + K NA LR Sbjct: 751 VVLRNDEKTFTEDEIEKIMGNVYARLKDKFNAKLR 785 >gi|289427772|ref|ZP_06429483.1| phenylalanine--tRNA ligase, beta subunit [Propionibacterium acnes J165] gi|289159036|gb|EFD07229.1| phenylalanine--tRNA ligase, beta subunit [Propionibacterium acnes J165] gi|313826063|gb|EFS63777.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL063PA1] Length = 839 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 245/866 (28%), Positives = 396/866 (45%), Gaps = 89/866 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 T + + + PR+ + ++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTINVDLP-NRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVA 468 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 469 PTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEAG 525 Query: 507 MMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 526 FVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMS 585 Query: 562 RAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS-- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 586 RSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWL 645 Query: 602 GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 646 PDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIVD 697 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K D Sbjct: 698 GK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKED 753 Query: 720 LAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 754 VALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRTL 813 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 814 TDSEALETRDAAVARAEETCGAQLRS 839 >gi|332881050|ref|ZP_08448718.1| phenylalanine--tRNA ligase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332680962|gb|EGJ53891.1| phenylalanine--tRNA ligase, beta subunit [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 810 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 234/848 (27%), Positives = 408/848 (48%), Gaps = 84/848 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK +L D++ E+ LT +GLEVE ++ E+ L + VL E++P Sbjct: 1 MKISYNWLKQYLKLDLAAEETGVILTDLGLEVEGIEPFESVKGGLKGVVVGLVLECEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + ++D G+ +Q+VCGAPNV G A G+ + ++ + KIRG Sbjct: 61 NADKLKVTKVDVGQEAPLQIVCGAPNVAKGQKVPVATIGTVLYDHEGKPFEIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+C+E EL L + IM L VG ++ ++ +D + ++ LTPNR+D + Sbjct: 121 ESYGMICAEDELGLGESHEGIMVLDDKYAVGTPCAEVFQVETDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A DL A + K + + P ++ +++ ++ + L + + VR Sbjct: 181 YGVARDLRAGLIQKGVSLELITPSVTKFHVDNRSVKVDIEVTNKKLVPRYTGVAISNVRV 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEK 286 +P W++ RLKA+G+ + +VD TNYV G P H FDA I L V+ A +G Sbjct: 241 GESPAWLQNRLKAIGITPKNNVVDATNYVLHGLGQPLHAFDADHIVGRKLIVKTAEAGTV 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD + L ++++I + IAG++GG+ +G +T +V +E A +DP+++ ++ Sbjct: 301 FTTLDGVKRTLDAEDLMIYDAEKPLCIAGVLGGQDSGVTHSTRNVFLESAYFDPVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRK-- 403 K I TD+ YRFERG++++ L + LI ++ GG +SD+ I + P+K Sbjct: 361 AKRHSISTDASYRFERGINIEDCKYALMYAAVLIENIAGGVISSDV-----IDFYPKKKD 415 Query: 404 --IVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 VF+ E V +L G +P + IL L V ++ + +PS+R DV+ +AD+ Sbjct: 416 DFQVFLAFENVDKLIGQKIPRDTIKSILHSLDIKVSSLTERGLGLLIPSYRVDVQREADV 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKRVLASRAMMEVV 511 +EEILRIYG + I +K N S+ S ++Y V L + E++ Sbjct: 476 IEEILRIYGYNNI--------SFSEKINASMSHS-SKYDDLNMQNVVAAQLIGQGYYEIM 526 Query: 512 NWSFISKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S +S+++ + E +++LNP+S+D+ MRT+LL L+ N++R +D +F Sbjct: 527 TNSLVSEKEITSYEAAPEEAVKLLNPLSSDLGYMRTNLLFSGLEVVSYNINRKRSDLRLF 586 Query: 571 EVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 E Y + + QK++ + +G R V F+ K ++ Sbjct: 587 EFGKNYRVRDGKYDEQKHLLLYL---------TGNQLPQSWITTPRAVSFFELKGSVEAL 637 Query: 629 IE----------PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 E P D++ E W + E +LG G IL F Sbjct: 638 FERLGLKEVTTLPLEPTDNVAAE--GFRWMY----------GETLLGTMGVVKHKILKDF 685 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNI 736 + + +++ +++ ++ + KVV+ +S V+RDLA ++D + L + Sbjct: 686 DIKQEVLYADLHWETLL----EQVRGHKVVYKEISKYPEVRRDLALLLDDKVSFADLYRV 741 Query: 737 IKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 ++ ++ + +FDV+QG L GKKS A+ ++Q T D I M ++ Sbjct: 742 AFATEKSILKQINLFDVYQGDKLAAGKKSYAVSFILQEENKTLTDKQIDKTMLKLQTAFE 801 Query: 796 KKTNAVLR 803 + A LR Sbjct: 802 QSLGATLR 809 >gi|320335872|ref|YP_004172583.1| Phenylalanyl-tRNA synthetase subunit beta [Deinococcus maricopensis DSM 21211] gi|319757161|gb|ADV68918.1| Phenylalanyl-tRNA synthetase beta chain [Deinococcus maricopensis DSM 21211] Length = 818 Score = 293 bits (751), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 241/841 (28%), Positives = 391/841 (46%), Gaps = 80/841 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MK SWLK+ + S + L ++GL +E V+ A P V + +V R ++ Sbjct: 1 MKLPYSWLKELVPALPSAHDLEPILANLGLPLEGVEAVPA--PPEGVLLATVTRAEAIEG 58 Query: 60 --CAILRIDTGKHQEIQVVCGAPN---VRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 L +D G H E + GAPN + G + PGS + ++ VR ++G+ES Sbjct: 59 TQLTQLTLDVGAHGERTIASGAPNAVGLPAGTMVALVTPGSRL--GDVEYGVRTLQGVES 116 Query: 115 TGMMCSEKELMLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 GM S KEL + + SA ++ P AP G + D +D ++DV +TPNR+D + G Sbjct: 117 WGMCASAKELGIGEASAGLLLFPAGTAPAGTPMRDVWA-ADEVLDVEVTPNRADVLSALG 175 Query: 174 IALDLVA----------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 +A DL A AG + I+ L + + +E + + C F V Sbjct: 176 LARDLAAALELELRDPPAGPEAHGDGEITVTLPRDRVVIENDPERKPRAACDAFVARTVS 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD--------------- 268 G+RN +P WM++RL GLR+I +VD +NYV L+ G P+ ++D Sbjct: 236 GLRNGPSPLWMQRRLTLAGLRTIDLIVDTSNYVMLELGQPTALYDRRDVTNDQIHVGLGL 295 Query: 269 --ASRISDVLTVRRACSGEKILALDNQEYD-LSPDNVVIA----SDGR-IQSIAGIIGGK 320 R++D++ E +L + Y LSP + DGR + IAGI+GG Sbjct: 296 GQGERVADLMGAEHLVHREDLLIRNGDAYPILSPGAALAGMDAPEDGRNVIGIAGIMGGH 355 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 +TT+++VE A +DP+ + R+ LG+ TD+ YR+ERGVD + IV L Sbjct: 356 RGRVRADTTNIVVESAHFDPVMLRRTSTRLGLKTDAVYRYERGVDPALPLRAANRIVGL- 414 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 L GGT PR + + L G++VP + L RLG +V D Sbjct: 415 LGEAGGTVHPGATVAGQPDAPRDLTLTGDHARALLGMNVPTAEMAAFLTRLGCAVHANGD 474 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVK 499 V+ P+WR D+ DL+EEI R++G + E LP QV + +SR R +K Sbjct: 475 TLTVTPPTWRVDMLIPEDLIEEIARLHGYRNLP-ETLPTVQVHPDNLGADDESRARRTLK 533 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 LA EVV ++F + ++ + + + NP++AD + +RT+L P LL+ G N Sbjct: 534 GTLAGLGFQEVVTYTFTNDAEAEAARTERPNVRLRNPLTADRTGLRTALYPSLLRTAGAN 593 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQK---YMAAGI--RKGSSGIEGSGRLWSDKSEERCR 614 +A +FE+ HV+ EG++ M + R G+ G + Sbjct: 594 -SKAPRQL-LFELGHVFPASG-EGERLGLLMRGPLAPRNWQPGVAGGFSV---------- 640 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 F L +A A L + ++ LR ++ P HPG +G ++ + G+ G HP + Sbjct: 641 FKGLVEAFAGTLGA---DLQVEQLRGDA-VPGALHPGIAGRVRWNGAAA-GWIGALHPEV 695 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 FGL E+ L + R ++ V RDLA I + + + Sbjct: 696 AAAFGLKGDTFLMELTLPLAGRAWAFRDPSRAPV-------AWRDLAVIAPRDVSYAEVA 748 Query: 735 NIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 ++++ L+ D+ FDV++G+S+ EG +SVA+++ Q + T D D+ +M+ ++ Sbjct: 749 DVLRAEGGPLLRDLAPFDVYEGESIPEGTRSVAVRLNFQGER-TLTDADVDPVMEHLMAA 807 Query: 794 V 794 V Sbjct: 808 V 808 >gi|317124681|ref|YP_004098793.1| phenylalanyl-tRNA synthetase subunit beta [Intrasporangium calvum DSM 43043] gi|315588769|gb|ADU48066.1| phenylalanyl-tRNA synthetase beta subunit [Intrasporangium calvum DSM 43043] Length = 856 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 242/867 (27%), Positives = 396/867 (45%), Gaps = 75/867 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ L+WL ++ D + + +L S+GLE E + + P + +VL E Sbjct: 1 MRAPLTWLAEYTDLAPGATGVDVAASLVSVGLEEEDLHGGDITGPLVVGRVLEFEETIQK 60 Query: 59 DCAILR------------IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + +R + GKHQEI VCGA N VG L V PG+ +P ++ Sbjct: 61 NGKPIRFCVVDVGHHGQMVTEGKHQEI--VCGATNFEVGDLVVVVLPGAVLP-GGFQISA 117 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELP--------IDAPVGGRLSDYLELSDPIID 158 RK G S GM+C+E E+ L D A I+ LP G L L + I+ Sbjct: 118 RKTYGRISNGMICAEDEIGLGHDHAGIIVLPRLLGEEHVAGVQPGDDAIALLGLGEETIE 177 Query: 159 VSLTPNRSDCIGVRGIALDL---VAAGLGKLKE-INISCPLSSES---IPLEIKFDLDDS 211 ++TP+R C VRG+A + + G ++ +I P+ +++ + L + L Sbjct: 178 ANVTPDRGYCFSVRGLAREYWHSQGSPAGGFRDPAHIETPMGNDTGFPVVLTDEAPLGGV 237 Query: 212 SLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDAS 270 C F V+GV + +P WM++R+ +G+R IS VD+TNYV + G P H +D Sbjct: 238 DGCDRFVARVVRGVDASAPSPAWMQKRIAQMGMRPISLAVDVTNYVMMALGQPLHAYDLD 297 Query: 271 RISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDGRIQSI---AGIIGGKHAGCD 325 ++ + VRRA GE + LD+ E L P++++I A DG ++ AG++GG + Sbjct: 298 TLTGPIVVRRARPGETLTTLDDVERSLDPEDLLITDAGDGEADTVLGLAGVMGGASSEVR 357 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D+TT+VL+E A +DP ++AR+ + +++++ RFERGVD + L++ G Sbjct: 358 DSTTNVLIEAAHFDPTSVARTSRRHRLVSEASKRFERGVDPAVPAAAAEMAARLLVEHGG 417 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFE 443 G + T +P E R+ G++ P E ++IL LG V E + Sbjct: 418 GRIDPGVTDLDQTTRPAPYRLEVDETSRIVGVEYPRERVIQILRDLGAEVAESPEEGFVD 477 Query: 444 VSVPSWRQDV---EEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVK 499 V PSWR D+ D EE+ RI G + I S P P + R L+ Q R V Sbjct: 478 VRPPSWRPDLVNDSPAPDYAEEVARIDGYNNIPSVTPTP----SEGRGLTHGQKVRRVVA 533 Query: 500 RVLASRAMMEVVNWSFIS---KEQSVLFGGGQRELEI--LNPISADMSNMRTSLLPGLLK 554 LA EV+++ F++ ++ +L G R L + NP+S + MRTS+L L+ Sbjct: 534 DALAGAGFTEVLSYPFVADDLADRMMLPPGDDRRLAVRLANPLSEERPLMRTSVLASLVD 593 Query: 555 ATGRNVDRAIADFAIFEVSHVYE-------------NDTPEG----QKYMAAGIRKGSSG 597 RNV R D A+FE+ V+ + P G Q Y A + G Sbjct: 594 VLRRNVSRGHKDVALFEMGLVFRPGGPLRRAPIPSVSGRPSGPDLEQLYAAVPAQPRRVG 653 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK 657 + +G R V+ D A +V V + ++ W HPGR I Sbjct: 654 VLATGSAEQAGWWGAGRPVEWSDMVAAVEAVAAALVVPVVVTADADHAPW-HPGRCARIA 712 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + V+G+ GE HP +L L G E+ +D + ++ + + V S+ Sbjct: 713 LADGTVVGHAGELHPKVLTALDLPPRTVGAEIDVDVLTVASDRAVQA---VSFSTFPAAL 769 Query: 718 RDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 D+A +V +PAG + + + ++ V++FDV++G+ + G +S+A ++ + Sbjct: 770 TDIALLVRTDVPAGDVEAALRRGAGEALEGVSLFDVYEGERIEAGHRSLAYRLTFRAADR 829 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T +++ D V + AV R Sbjct: 830 TLTTEEVNGFRDAAVAAATQSVGAVQR 856 >gi|313819726|gb|EFS57440.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL046PA2] gi|313822266|gb|EFS59980.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL036PA1] gi|313823741|gb|EFS61455.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL036PA2] gi|314924562|gb|EFS88393.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL036PA3] gi|314962171|gb|EFT06272.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL002PA2] gi|315087008|gb|EFT58984.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL002PA3] Length = 839 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVILESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|116617566|ref|YP_817937.1| phenylalanyl-tRNA synthetase beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096413|gb|ABJ61564.1| phenylalanyl-tRNA synthetase beta subunit [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 818 Score = 293 bits (750), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 233/842 (27%), Positives = 416/842 (49%), Gaps = 63/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVER 54 MK +L+W+ ++LD + L + + D + ++D+ ++ + K+LSV Sbjct: 1 MKTSLTWINEYLDNAIDLHPKSVSDLAEKVERTSVEIDSNTTIASGQNGLVVAKILSVIP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIV--NVRKI 109 +PD D I +++ G+ + IQ+V GAPNV G + + A G+ I EN ++ N K+ Sbjct: 61 HPDSDHMVITQVEAGEPEPIQIVTGAPNVAEGQMVILAKVGAHIINRENGELIELNAVKL 120 Query: 110 RGIESTGMMCSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSL 161 RG S GM+ + +E+ SD A + D G L + +P++D L Sbjct: 121 RGEFSYGMLVALQEIGFSDKIAPKAFEAGIYVFNETDDVKPGDDALVALGMDEPVLDTDL 180 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE------IKFDLDDSSLCK 215 TPNR+D + + G A + G + ++ P S E + E + +DD L Sbjct: 181 TPNRADMLSMIGTAYEF-----GAMLNKPVTLP-SFELVEYEQTADSQVSVQIDDQELVS 234 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--S 273 +A+ V V +P W+++RL G+R I+ +VDITNY+ L G P H FD ++ S Sbjct: 235 KYALRVVNNVTIKDSPLWLQKRLWNAGMRPINNIVDITNYMMLTYGQPLHAFDLDKLNGS 294 Query: 274 DVLTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 D+ VRRA GEK++ LD +E L S +++VIA + +AG++GG + D+NT +++ Sbjct: 295 DIY-VRRAKDGEKLVTLDGEERSLRSGEDIVIADESEGLMLAGVMGGMGSEIDNNTKNIV 353 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDI 391 +E A+++P + + + + +++ RFERG++ + L H SL+ L G A Sbjct: 354 IESAIFNPSLVRATARRHNLHSEASSRFERGLNWDETLNALDHAASLVDELADGQVARGQ 413 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 +A + K ++ V + G + ++ I ++L F +K V VP+ R Sbjct: 414 IVAADDVRKDIRLSLSIQRVNNILGTSLETDEIANIFDKLNFVYEKNDEKIVVDVPARRA 473 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ +ADL+EE+ R+YG D + LP + LS +Q + R + ++ S + + + Sbjct: 474 DISIEADLIEEVARLYGYDNLPV-TLPYGPTTSGK-LSREQRQIRASRHIMESLGLNQAI 531 Query: 512 NWSFISKEQSVLFGGGQRE-LEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 ++ + E++ LF + + + LN P+S+D + R +LL GLL NV + + A+ Sbjct: 532 SYVLTTSEKAQLFAENKADGVVTLNYPMSSDRTTARQNLLAGLLDDVSYNVSHFVPNVAL 591 Query: 570 FEVSHVYENDTPEGQKY---MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +E V+ + P Q AG+ G+ ++ S W + +E+ VD +D K Sbjct: 592 YEQGRVFIANEPNEQPKEIEHIAGVVTGN--LQKSS--WQESKQEKA--VDFYDIKG--- 642 Query: 627 SVIEPF---VSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 ++E + + +D++R+ + HPG++ I + V G+ G+ HP I L+ Sbjct: 643 -IVENYLDQIGVDNVRYVATERHESMHPGQTADIYIGEQYV-GFVGQIHPKITKKQKLA- 699 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVD 741 P+ GFE+ L ++ T + + +S + RD A +VDQ + I++ Sbjct: 700 PVFGFELNLFTV---FNHVTDSIQFNPISRFPQISRDAALLVDQATTNSEISATIVETAG 756 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + DVT+FDV+ G +L E KKS+A + Q T + D+ + I+ + K N Sbjct: 757 EHLVDVTLFDVYTGNNLPESKKSLAYTLTYQDSDGTLLETDVNSDFEHIMSELQSKFNVE 816 Query: 802 LR 803 +R Sbjct: 817 IR 818 >gi|255033826|ref|YP_003084447.1| phenylalanyl-tRNA synthetase subunit beta [Dyadobacter fermentans DSM 18053] gi|254946582|gb|ACT91282.1| phenylalanyl-tRNA synthetase, beta subunit [Dyadobacter fermentans DSM 18053] Length = 809 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 236/838 (28%), Positives = 394/838 (47%), Gaps = 65/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + WLKD ++ + S +I LT GLEVE ++ E+ L I +VL+ E++P Sbjct: 1 MKISYKWLKDLIELNESPAEIDRLLTGTGLEVEGIEEIESIKGGLQGVVIGEVLTREKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI----PENNMIVNVRKIRG 111 + D ++ +D G + +VCGAPNV G + A G+ + + +++ KIRG Sbjct: 61 EADRLSLTTVDVGGETPLSIVCGAPNVAAGQKVIVATVGATLYPTGSDQPLVLKKSKIRG 120 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIG 170 S GM+C+E EL + I+ L D P G ++Y +S D +I++ LTPNR+D Sbjct: 121 ALSEGMICAEDELGVGTSHDGILVLDTDLPNGTPAAEYFGISSDYLIEIGLTPNRADAAS 180 Query: 171 VRGIALDLVAA--------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 G+A DL A + K N + P IP+E++ ++ C + + Sbjct: 181 HYGVARDLKAVLKREITLPSIEAFKTDNQNLP-----IPVEVR----NTEACPRYTGLTI 231 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 G+ +P W++QRL+ +G+R+I+ +VDITNYV + G P H FDA ++ + V Sbjct: 232 SGITVTESPEWLKQRLQTIGIRAINNIVDITNYVCHELGQPMHAFDADKVLGKKVIVTTV 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDG-----RIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 G + LD E +S ++++I S+G IAG+ GG +G + TT + +E A Sbjct: 292 AEGTPFVTLDGIERKISANDLMICSEGVDGNPEPMCIAGVFGGLTSGVTETTTSIFLESA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIAR 395 + P+ + R+ + + TDS +RFERG D + LK LI + GG+ +SDI Sbjct: 352 YFSPVWVRRTAQRFALKTDSSFRFERGTDPNMPLFALKRAALLIQKVAGGSISSDIIDLY 411 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVE 454 K+ N + RL G + + ILE L V E + F VP +R DV+ Sbjct: 412 PEPIADFKVNIKNRNIDRLIGKSLEKDLIKSILESLDIQVTDETETGFTAIVPPYRVDVQ 471 Query: 455 EKADLVEEILRIYGVDQIK------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +AD++EEILRIYG Q++ S+ + V D L L+ V +L Sbjct: 472 READVIEEILRIYGFGQVELSDALSSDYISDFPVNDPEKLKLR------VSELLVGNGFN 525 Query: 509 EVVNWSFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 E++N S E + G ++ILN +S D+S MR +LL L+ N +R D Sbjct: 526 EMINNSLTKPEYQAILGESLAGTPVKILNYLSEDLSVMRQTLLFSGLEVIAYNSNRRQKD 585 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE Y + I K + +G + + E+ R V D A Sbjct: 586 LKVFEFGKTY-------HEIDGKFIEKERLSVFVTGNITQESWFEKSREVVFHDLAAFVN 638 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 V+ D + E+ + + +SG+ + + + FG + + + P+ Sbjct: 639 QVLTSMKIRDVQKQEADSAVF----KSGLTLLANKKPVVSFGLLNAAVAKKLDIKAPVYY 694 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 + + + ++ + + V+RDL+ ++++ + L +R L+ Sbjct: 695 ADFDWEYL---LRQYNAAVEYAEVPKFPEVRRDLSVVLNKKVTFEELRQAAFKTERSLLR 751 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V VFDV++G +L EGKKS +I ++Q + T D I M R++ ++ AV+R Sbjct: 752 AVNVFDVYEGANL-EGKKSYSISFILQDEQQTLTDKVIDKTMQRLIATYEREFEAVIR 808 >gi|295693347|ref|YP_003601957.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] gi|295031453|emb|CBL50932.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus ST1] Length = 806 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 228/814 (28%), Positives = 403/814 (49%), Gaps = 43/814 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD LD D ++ + +T G+E+ +++ + L + +VL E Sbjct: 1 MLVSYNWLKDFLDLDGQDPYELAEEITRSGVEIPDRIHPMDGLKKLVVGRVLDCEGVEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+ Sbjct: 61 HLHLTHVDVGEDEPLQIVCGAPNVAAGEDVIVALHGARIAGNEKIKK-GKIRGMESYGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +E+ SD I P DA V G + + L + D I++ +TPNR+D +G Sbjct: 120 CGLQEIGFSDSVVPQEFVDGIYVFPADAEVKPGQDVYEALGMDDYILNFDITPNRADTLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + ++ L + D+ D L F + ++ V+ Sbjct: 180 MEGAAYE-VGAIIDQKPKVEEKVVLKEDGPAWTDSLDVKVDEKLAPKFYLRKLENVKIQD 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL G+R I+ +VDITNYV L G P H +DA ++ VR A GEK+ Sbjct: 239 SPLWLQRRLWDAGIRPINNVVDITNYVMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E +L P++++I + +AGI+GG ++ TTDV++E A++DP + ++ Sbjct: 299 LLNEKEVELDPNDIIITDGEKPVMMAGIMGGLNSEITSETTDVILESAIFDPALVRKAAL 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + +P + Sbjct: 359 RHANRTEASSRYEKGVNWDATEKAINMAALLLRNDADATVDEGILKATDQKREPVVVKTT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + ++ G + +++ ++I +RL F V + D V VP+ R D+ ADLVEE+ R+Y Sbjct: 419 ASYLNKVLGTKLSVDEIVKIFDRLCFKVDVDGDNLAVHVPNRRWDISIPADLVEEVGRLY 478 Query: 468 GVDQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G D ++S +P LP T S ++ R +K ++ + +ME +++S S E++ + Sbjct: 479 GYDNLESTQPVLPETH----GGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKATRYT 534 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 ++L E+ +P+++ S MR +L+ GL+ A N R A+FE Y++D + Sbjct: 535 KDPKDLVEVQSPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRTYDHDGGKFN 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 +++AA SG +++ + + VD + K ++ + + + +E Sbjct: 595 EHEHLAAIY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFNAIGIDPEKVVYE 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFG--EFHPNILDFFGLSNPICGFEVYLDS-IPISQ 698 + HP R+ I + V G G I D + + G+E+ LD+ IP+ Sbjct: 646 AKGIKGMHPTRTAGIYIDKQYV-GMIGMVAHAVTIADKALRGSELYGYEIDLDTIIPM-- 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK V ++RDL+ +VD+ + + N+IK N + + ++ V DV+ G Sbjct: 703 --LTKGVTAVPAPKFPAIQRDLSLLVDKPVTNQEIENVIKSNAGKYLTELKVIDVYAGAH 760 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + GKKS+A + KDT DD + MD+IV Sbjct: 761 IDVGKKSIAYNLTFLNRKDTLTDDVVNNAMDKIV 794 >gi|313816636|gb|EFS54350.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL059PA1] Length = 839 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 ARSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|262196927|ref|YP_003268136.1| phenylalanyl-tRNA synthetase subunit beta [Haliangium ochraceum DSM 14365] gi|262080274|gb|ACY16243.1| phenylalanyl-tRNA synthetase, beta subunit [Haliangium ochraceum DSM 14365] Length = 835 Score = 293 bits (750), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 247/850 (29%), Positives = 403/850 (47%), Gaps = 62/850 (7%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER-NPD 57 M+ SWL++ LD D+S E+ LT G EVE V+ +V + +R +P+ Sbjct: 1 MRVVWSWLRELVELDRDLSAEEAARALTGAGFEVEAVEGFGQEVRGVVVAEVVAKRPHPE 60 Query: 58 LDCAILR--IDTGKHQEIQVVCGAPNV-RVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + L IDT + +QVVCGAPNV G +WA PGS +P + R+I+G+ S Sbjct: 61 AERLTLVDVIDTPGGEPVQVVCGAPNVPEPGGRVLWAKPGSHLPGIGEL-KTREIKGVAS 119 Query: 115 TGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLS------DYLELSDPIIDVSLTPNRSD 167 GM+C+E EL L DD I+ L P D G L D L L + ++ + NR D Sbjct: 120 PGMLCAEDELGLGDDHGGIIVLDPRDVMGGAELLGAGDALDLLGLRGHVFEIDIHANRGD 179 Query: 168 CIGVRGIALDLVAAGLGKLKEINI----------SCPLSSESIPLEIKFDLDDSSLCKGF 217 +G G+A + AA G+L+ + S + E+ L + D+ C + Sbjct: 180 ALGHLGLAREFAAAVGGRLRVPAVFADAEAVLADSRDSAREAAEL-VSVDIAAEDGCPRY 238 Query: 218 AMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-L 276 ++GVR +P WM+QRL+AVG+R +S LVDITNYV + G P H FD R++ + Sbjct: 239 TARVIEGVRVGPSPLWMQQRLRAVGVRPLSNLVDITNYVMFELGQPLHAFDIDRVAGPEI 298 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VR A GE++ LD+ E L+P++++I ++AG++GG + TT VL+E A Sbjct: 299 RVRWAQDGERMTTLDDVERQLTPEDLLICDANGPVALAGVMGGAETEVGEGTTRVLLESA 358 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIAR 395 +D + R+ + LG+ +++ RF RGVD L+ L GG A + A Sbjct: 359 SFDASAVRRTARRLGLNSEASARFGRGVDPNLAEAASARAADLMCRLAGGRVAEGVVDAY 418 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF---SVIGEYDKFEVSVPSWRQD 452 +P ++ S L GI+V +D+ L LG V + D+ ++VP+ R D Sbjct: 419 VRRAEPTQVSLRASRASALLGIEVTRDDAAAALAGLGIASEPVADDEDRLSITVPTHRPD 478 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + + D++E+I+R+ G D + + +P QV +R + +R + L + + E + Sbjct: 479 LAREVDIIEDIVRLRGFDAVPAT-MPRGQVPRQR---VSDTRPARARTALLAAGLSEAIT 534 Query: 513 WSFISKEQSVLFG---GGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + F S+E+ G G R + + NP+SA+ + MRT LLP LL A RN+ + D Sbjct: 535 FGFCSRERLDAMGVAAGDPRTQPIALRNPMSAEQAVMRTMLLPNLLSAVRRNLSYDVRDV 594 Query: 568 AIFEVSHVY-----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 +FEV V+ ++ + G + + + G W + E VD FDAK Sbjct: 595 GLFEVGSVFLGQASDSASEAGDAALPDEPTVLAGVLTGQRPGWLESGGE----VDFFDAK 650 Query: 623 ADALSVIEPFVSLDSLR---FESGAPSWYHPGRSGIIKTSAE----IVLGYFGEFHPNIL 675 +V+ + R G ++HPG I+ E + G+ GE HP + Sbjct: 651 GAVEAVLAALLPDWQQRASFVADGEIPYFHPGVCARIEVPGEGDAVQIAGHVGEIHPQVR 710 Query: 676 DFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 FGL FE+ L + P + + + V RD++ ++D IPA + Sbjct: 711 KHFGLEPRCFAFELRLAAFPAPVPAQMQA-----IPRYPAVTRDISMLMDAAIPASRVRE 765 Query: 736 II-KNVDRLIDDVTVFDVFQGKS-LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 +I + L++ V V + ++ + + GKK + + + + T D + IVE+ Sbjct: 766 VIDARAESLLERVLVLEDYRDPAHVPAGKKGMLWSITYRSAEGTLTDAQVDKAHGAIVEH 825 Query: 794 VVKKTNAVLR 803 ++ A R Sbjct: 826 LLATLPAERR 835 >gi|327333957|gb|EGE75673.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL097PA1] Length = 839 Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 245/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S ++ VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGMIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRL-SGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ L G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNLILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTPEGQ------------------KYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP+ + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPDAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|332300296|ref|YP_004442217.1| Phenylalanyl-tRNA synthetase beta chain [Porphyromonas asaccharolytica DSM 20707] gi|332177359|gb|AEE13049.1| Phenylalanyl-tRNA synthetase beta chain [Porphyromonas asaccharolytica DSM 20707] Length = 829 Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 251/854 (29%), Positives = 419/854 (49%), Gaps = 76/854 (8%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVER 54 M + +WL+ +L + ++ +TLT+IGLEV V+ E+ L I + L+ Sbjct: 1 MNISFNWLQQYLPRLEGYNPNEVAETLTAIGLEVAGVEQTESVRGGLRGVVIGRTLTCIP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMI-VNVRKIR 110 +P+ D + +D G+ + +Q+VCGAPNV G + A G+ + P+ + K+R Sbjct: 61 HPNSDHLHVCTVDLGEEEPVQIVCGAPNVAAGQTVIVATVGTTLYGPDGESFKIKKSKLR 120 Query: 111 GIESTGMMCSEKELMLSDDSASIMELPIDAPV--GGRLSDYLEL-SDPIIDVSLTPNRSD 167 G S GM+CS+ E+ + DS+ I L D V G +DY +L SD +I++ +TPNR D Sbjct: 121 GEPSMGMICSQVEIGMGADSSGIWVLD-DETVKPGTPAADYFDLASDTVIEIDITPNRVD 179 Query: 168 CIGVRGIALDLVA------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMC 220 G+A DL A + + + ++ P S ++ I+ +++ S+ C + Sbjct: 180 ATSHYGVARDLAAYYSYREGQVIRAERPTLTKPQSVDARASAIQVEMEVSAEDCPRYQGV 239 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVR 279 ++G++ +P+W+++RL+++G R I+A+VD+TN+V + G P H FDA +I+ +L + Sbjct: 240 TIRGLKCVESPDWLKERLQSIGQRPINAVVDVTNFVLHEIGQPLHAFDAQKIAGGLLRIA 299 Query: 280 RACSGEKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 +G LD E+ L+ +N++ S I G++GG +G TTD+ +E A + Sbjct: 300 HLPAGTPFTTLDGVEHKLTGMENMICDSQLTPLCIGGVMGGLDSGVTMETTDIFIEAANF 359 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNI 397 +P R+ ++ G+ TDS +RFERG+D + L+ VSLIL +CGG A + + Sbjct: 360 NPTITRRAARSHGLSTDSSFRFERGLDPEATDWALQRAVSLILEICGGKLAEETVDHYRM 419 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEK 456 P ++ V R G ++ + ILE L S E D F +SVP +R DV Sbjct: 420 HLDPVELTISTDYVSRAIGRELTADQLQLILEALEMSPKAVEGDAFAISVPRYRYDVTRP 479 Query: 457 ADLVEEILRIYGVDQIKSEPL------PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+VEE+LRIYG + + PL L++ D+ ++ Q + + +L E+ Sbjct: 480 VDVVEEVLRIYGYNAV---PLSGYVHASLSKQSDQDHIYHAQLK---LSELLTGFGYREI 533 Query: 511 VNWSFISKEQSVLFGGGQRELE------ILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 +N S S++ + GQ+ + I NP+S +++ +R +LL G L+ NV R Sbjct: 534 LNNSLTSRQ----YFEGQKAFDPNQLVPIENPLSQELNVLRPTLLVGGLETISDNVHRKQ 589 Query: 565 ADFAIFEVSHVY---END---TPEGQKYMAAGIRKGSSGIEGSGRL----WSDKSEERCR 614 A++E +VY +ND TP Q A + G+ SG L W+ E Sbjct: 590 PYCALYEWGNVYRYKQNDLAATPLDQYTQAHRL-----GLWLSGTLMPNSWTTAGEATSP 644 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-KTSAE-IVLGYFGEFHP 672 + + + L F + D + P+ H S ++ T E L Y G Sbjct: 645 Y--MLRGVVEKLLAHMGFTTED---YSVTTPAECHDLWSDVVCYTDREGKSLAYVGVVSN 699 Query: 673 NILDFFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 L + + E+Y D++ + Q K T+ LS VKRDLA ++D I Sbjct: 700 YWLTKCDIKQSVYYAELYSDTLMAYLLQHKVVSTE----LSKYPTVKRDLALLIDNDISY 755 Query: 731 GTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L +R L+ + +FDV+ GK L +GKKS A+ ++ K T RD I M R Sbjct: 756 EALARTASKAERKLLQRIELFDVYTGKELPKGKKSYALSFYLRDDKGTLRDAQIDAAMKR 815 Query: 790 IVENVVKKTNAVLR 803 I + + ++ +A LR Sbjct: 816 IWQAIEQEYHATLR 829 >gi|314954514|gb|EFS98920.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL027PA1] Length = 839 Score = 293 bits (750), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 397/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + + + RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSQASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|50842890|ref|YP_056117.1| phenylalanyl-tRNA synthetase beta chain [Propionibacterium acnes KPA171202] gi|66773899|sp|Q6A7V6|SYFB_PROAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|50840492|gb|AAT83159.1| phenylalanyl-tRNA synthetase beta chain [Propionibacterium acnes KPA171202] Length = 839 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 245/867 (28%), Positives = 398/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ + +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESIELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|206889551|ref|YP_002249216.1| phenylalanyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741489|gb|ACI20546.1| phenylalanyl-tRNA synthetase, beta subunit [Thermodesulfovibrio yellowstonii DSM 11347] Length = 692 Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 204/669 (30%), Positives = 348/669 (52%), Gaps = 35/669 (5%) Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS 212 SD ++D+ +TPNR+DC+ + GIA ++ A KLK+ S + E + + + Sbjct: 40 SDTVLDLEITPNRADCLSIIGIAREIKAIFGLKLKKP--SFKIKKELKDNKFTISIANPE 97 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 LC +A V+ V+ + +P W+++RL+A G+RSI+ +VDITNYV L+ G+P H FD R+ Sbjct: 98 LCYRYAGRIVRDVKISPSPQWLKKRLEASGIRSINNVVDITNYVLLEYGHPLHAFDLDRL 157 Query: 273 SDVLTVRRAC------SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 +R S E+I+ LD + ++ D+++I + ++AGI+GG + D Sbjct: 158 EG-YQIRVGTPEAFRKSIEEIVTLDGVKRKINHDDLLIWDGVKPVAVAGIMGGANTEVTD 216 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 TT++L+E A + P I ++ K LGI T++ YRFERG D++ + L LI L GG Sbjct: 217 KTTNILIESAYFKPERIRKTSKRLGISTEASYRFERGTDIETLKEALDRAAFLIQELTGG 276 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV-S 445 T + + +KI+F ++ + G+ + ++ LRILE L +V + +KF + S Sbjct: 277 TVYEAIDVYPVKIPEKKILFSMEKICKFIGVTLKDKEVLRILELLEINVTKKDEKFYIAS 336 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +P+ RQD+ + D+ EE+ RIYG D I ++ P V + L+ ++ ++ L S Sbjct: 337 IPTHRQDLAIEEDIAEEVARIYGYDTIPAQMPSAFKYVTENHELTKKRKFLNLIRDYLIS 396 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRN 559 E VN+SF+S + +FG + ++ ++NP+ + S MRT LLP LLK T +N Sbjct: 397 LGYSEAVNFSFMSPDDLNVFGISENDIRRHYISLVNPLRQEESIMRTMLLPSLLKNTEKN 456 Query: 560 VDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 R I + +FE+ V+ + Q+ + GI I+ S + D D Sbjct: 457 TARGIENLRLFEIGKVFIAQEGASLPQEIVHLGIITKKEEIKSS---FKDDP------YD 507 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 + K V F ++++R+ + HPG+S I E + G+ G P +L Sbjct: 508 FYALKGLIEGVFRHF-KINNIRYIRSNEVFLHPGQSADILIKGEKI-GFIGVISPEVLSK 565 Query: 678 --FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 F IC E+ L+ + + K K S+ VKRD A I+ + + + Sbjct: 566 LDFKTKPFICMAEIDLNRLFSFAEAEIKYKP---FSTYPAVKRDTALILPIDFESQRIFD 622 Query: 736 IIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 IIK+ D LI++V +FDV+QGK + EGKKS+A ++ + T +++ + + ++ + Sbjct: 623 IIKSFDNELIENVFIFDVYQGKGIPEGKKSIAFRITYRASDRTLTAEEVENIHNNLIGKI 682 Query: 795 VKKTNAVLR 803 + +T A LR Sbjct: 683 IAETGAALR 691 >gi|218133476|ref|ZP_03462280.1| hypothetical protein BACPEC_01342 [Bacteroides pectinophilus ATCC 43243] gi|217990851|gb|EEC56857.1| hypothetical protein BACPEC_01342 [Bacteroides pectinophilus ATCC 43243] Length = 805 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 235/837 (28%), Positives = 407/837 (48%), Gaps = 84/837 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +L+W+K ++ + + ++ D +T G +VE +A L + +++SVE++PD Sbjct: 1 MNTSLNWIKAYVPGLECTDQEYMDAMTLSGTKVEGYKALDADLDKIVVGQIISVEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP--------ENNMIVNVRKI 109 D I +++ GK + IQ+V GAPNV G+ G + E + + K+ Sbjct: 61 DKLVICQVNIGK-ETIQIVTGAPNVVTGMKVPVVLDGGRVAGGHDGSKTEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL S D + +P DA VG + L L D + + +T Sbjct: 120 RGVESNGMMCSIEELGSSRDFYPDAPENGLYVMPEDAVVGSDAIEALGLRDTVFEYEITN 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC + G+A + A + +SE + +K D+ + LC + V+ Sbjct: 180 NRVDCYSILGVAREAAATFNKDFVMPPVKKVGNSEDVNDYVKVDVQATDLCPRYTARLVR 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 ++ +P WM++RL A G+R I+ +VDITNYV + G P H +D ++ + VRRA Sbjct: 240 NIKLAPSPEWMQRRLAASGIRPINNIVDITNYVMEEYGQPMHAYDYDTLAGGKIIVRRAE 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE+ + LD Q L P ++I + +AGI+GG+++ D+ +L E A +D N Sbjct: 300 EGEEFVTLDGQTRKLDPSILMICDAEKSVGVAGIMGGENSKITDDVKTMLFEAACFDGTN 359 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNIT 398 I S K +G+ T++ +FE+G+D + LI L G D+ +N+ Sbjct: 360 IRLSAKKIGMRTEASGKFEKGLDPNLASEAIDRACQLIEELGAGEVVGGMIDVYPQKNVE 419 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 ++I F ++ +L GID+ E+ L L+++ ++ + E+ +P++RQD+E AD Sbjct: 420 ---KRIKFEPDKINKLLGIDISAEEMLGYLKKI--ELVYNEETNELIIPTFRQDLECGAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS 517 + EE+ R YG I + LP + + LS + R V R +A + + +SF S Sbjct: 475 IAEEVARFYGYANIPT-TLPSGEATTGK-LSFKM-RIEGVARDIAEFCGFSQGMTYSFES 531 Query: 518 K---------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E S L ++ + I NP+ D S MRT+ L G+L + N +R + Sbjct: 532 PKVFDKLLLPEDSPL----RKAIVISNPLGEDFSIMRTTSLNGMLTSLSTNYNRRNKNVK 587 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS- 627 ++E+ ++Y P+ ++ +ER +F F D S Sbjct: 588 LYELGNIY---LPKSLP-------------------LTELPDERMQFTLGFYGDGDFFSM 625 Query: 628 --VIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 V+E F+ +R + ++ HPGR I E V+GY GE HP++LD + + Sbjct: 626 KGVVEEFLEKVGMRNKPEYNPDAGKTFLHPGRQADIVYDGE-VIGYLGEVHPDVLDIYSI 684 Query: 681 SNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII- 737 G + Y+ I P +K T +K ++ V RD++ ++D+ + GT+ +II Sbjct: 685 -----GEKAYIAVIDMPHIVEKATFDRKYEGIAKFPAVTRDISMVMDKSVLVGTVEDIIE 739 Query: 738 KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 K +L++ +FD+++G + G KSVA + + T D DI +M+ I++++ Sbjct: 740 KRGGKLVESYKLFDIYEGSQIKSGFKSVAYSISFRAKDRTLEDKDINPIMENILKDL 796 >gi|226357127|ref|YP_002786867.1| phenylalanyl-tRNA synthetase subunit beta [Deinococcus deserti VCD115] gi|226319117|gb|ACO47113.1| putative phenylalanyl-tRNA ligase beta chain (Phenylalanine translase) (Phenylalanyl-tRNA synthetase) [Deinococcus deserti VCD115] Length = 819 Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 244/855 (28%), Positives = 394/855 (46%), Gaps = 93/855 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK SWLKD + + ++ +GL +E ++ E +P V +++V +D Sbjct: 1 MKLPYSWLKDLIPALPPVNELEPVFAQMGLPLEGIE--EVAAPPEGVLLVAVTVAEPIDG 58 Query: 61 AILR---IDTGKHQEIQVVCGAPN---VRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 L +D G H E + GAPN +R G + PG+ + E M VR+++G+ES Sbjct: 59 TALTKLTLDVGPHGEKTIASGAPNAVGLRAGTMLALVTPGTTLGE--MTYGVRQLQGVES 116 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM S KEL L + SA +M P G L +D ++DV +TPNR+D + G+ Sbjct: 117 WGMAASAKELELGESSAGLMLFPAGTAAPGTPMRDLWAADQVLDVEVTPNRADVLSALGL 176 Query: 175 ALDLVA-------------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 A DL A A G+ EI +S P S + LE C FA Sbjct: 177 ARDLAAFLKLDLREPPARPAATGE-GEIRVSLP--SRGLTLERDPSRKLRFGCDHFAART 233 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVR 279 V + N AP WM++R+ G+R+I +VD +NYV L+ G P+ ++D + +L Sbjct: 234 VGALTNGPAPLWMQRRVTLSGMRAIDLIVDTSNYVMLELGQPTALYDRRDVQGDQILVSF 293 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGR----------------------IQSIAGII 317 GE + L E+ + P++++I DGR + IAGI+ Sbjct: 294 GLRQGEIVRDLLGNEHTVGPEDLLIL-DGRERAIPSVAEAFTTAHEPQRGAGVLGIAGIM 352 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 GG H +T DV++E A +DP+ + R+ LG+ TD+ YR+ERGVD + Sbjct: 353 GGDHGHVRTDTHDVVIESAHFDPVLLRRTSTRLGLKTDAVYRYERGVDPLLAPRAADRVA 412 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 L+ G A P I +++ L G+ V + IL RLG V G Sbjct: 413 GLLAEYGHGAAHPGVTLVGEPEVPGLIEATGEQIRTLLGMHVDTAEMRAILTRLGCRVEG 472 Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR- 496 E D V+ PSWR D+ DL EE+ R++G + E LP +V + + +S R Sbjct: 473 EGDMLRVTPPSWRVDMSIWQDLAEEVARLHGFTALP-ETLPTLRVHESNIGAAAESAART 531 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 +++R LA EVV ++F S +++ + + NP+SAD + +RT+L P LLKA Sbjct: 532 HLRRTLAGLGFQEVVTYTFTSDDEAAKARTETPGVRLRNPLSADRTGLRTALYPSLLKAA 591 Query: 557 GRNV--DRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG-------SSGIEGSGRLWSD 607 + +RA+ +FE+ H++ G+ + +G G+ GS + Sbjct: 592 QAHPKGERAL----LFEIGHIFPGS---GETERLGLLMRGPFAASTHQPGVAGSFGV--- 641 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 F L ++ A L + F L LR E+ P HPG +G I + + G+ Sbjct: 642 -------FKGLVESLAATLG--DSF-ELRQLRGEA-VPGALHPGVAGEILWNGQAA-GWL 689 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 G HP I F L E ++P+ +T S RDLA I Q Sbjct: 690 GALHPEIAQEFSLKGDTFVLEA---ALPLPG----RTWAFRDPSRAPAAWRDLAVIAPQS 742 Query: 728 IPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + G + ++K L++ V FDV+ G + EG++S+A++++ + + T D+++ + Sbjct: 743 VSYGEIAGLLKQAAGELLESVEPFDVYVGAPIPEGQRSIAVRLVFRGAR-TLTDEEVDPV 801 Query: 787 MDRIVENVVKKTNAV 801 M R++E V ++ ++ Sbjct: 802 MTRLMETVRAQSWSI 816 >gi|325262472|ref|ZP_08129209.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium sp. D5] gi|324032304|gb|EGB93582.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium sp. D5] Length = 805 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 234/837 (27%), Positives = 397/837 (47%), Gaps = 88/837 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +ER+PD Sbjct: 1 MNTSLSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGYEVMDADLDKIVIAQIDKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ +++ G + +Q+V GA NV G L G GS P + + K Sbjct: 61 DKLIVCQVNVGT-ETVQIVTGANNVHEGDKVPVVLDGGRVAGGHDGSKTP-GGVKIKKGK 118 Query: 109 IRGIESTGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS KE+ + I LP DA +G + L L+D + + +T Sbjct: 119 LRGVESCGMMCSIEELGSTKEMYPNAPEEGIYILPEDAEIGASAVEALGLNDVVFEYEVT 178 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A + + ++E + ++ ++++ LC + V Sbjct: 179 SNRVDCYSVIGIAREAAATFRKEFHPPVVKETGNAEDVNDYVQVKVENTDLCPRYCARVV 238 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I+ + V+ A Sbjct: 239 KNIKIGPSPEWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIAGHQIVVKTA 298 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+K LD QE + D ++I + IAGI+GG+++ D+ +L E A +D + Sbjct: 299 RDGDKFTTLDGQERTMDKDVLMICDGEKEIGIAGIMGGENSMITDDVQTMLFEAACFDGV 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI +S K +G+ TD+ +FE+G+D + L+ + G + + Sbjct: 359 NIRKSSKRVGLRTDASGKFEKGLDPNNAKAAIDRACQLVEEMGAGEVVGGTVDVYGKVKE 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 P ++ F +++ + G ++P + L E++G EYD EV P++R D+ AD Sbjct: 419 PVRVPFDAAKINAVLGTEIPEAEMLGYFEKIGL----EYDSAAKEVIAPTFRHDLFRLAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS 517 L EE+ R YG D I P L E + R V R +A + +++SF S Sbjct: 475 LAEEVARFYGYDNI---PTTLPSGESTAGKISFKLRVEEVARNIAEFCGFSQGMSYSFES 531 Query: 518 KE---------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + +S L + +EI+NP+ D S MRT+ L G+L + N +R D Sbjct: 532 PKVFDKLLIPAESAL----RNTVEIMNPLGEDYSIMRTTSLNGMLSSLATNYNRRNKDVR 587 Query: 569 IFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 ++E+ ++Y P ++ EER +F D S Sbjct: 588 LYELGNIYLPKQLP-----------------------LTELPEERMQFTLGMYGNGDFFS 624 Query: 628 ---VIEPFVSLDSLRFE------SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 V+E F ++ + SG P + HPGR I + + V GY GE HP + D + Sbjct: 625 MKGVVEEFFEKIGMKQKETYDPNSGKP-YLHPGRQANIIYAGKTV-GYLGEVHPEVADNY 682 Query: 679 GLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 G+ G Y+ I + + + T +K ++ V RD++ +V ++I AG + + Sbjct: 683 GI-----GERAYIAVIDMPEILEYATFDRKYNGIAKYPAVTRDISMVVPKNILAGQIEEV 737 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 I K ++ +FD+++G + G KS+A ++ + T + D+ M +I+E Sbjct: 738 IEKKGGSYLESYALFDLYEGAQIKAGYKSIAYSIVFRAKDKTLEEADVAAAMKKILE 794 >gi|255530737|ref|YP_003091109.1| phenylalanyl-tRNA synthetase subunit beta [Pedobacter heparinus DSM 2366] gi|255343721|gb|ACU03047.1| phenylalanyl-tRNA synthetase, beta subunit [Pedobacter heparinus DSM 2366] Length = 799 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 249/840 (29%), Positives = 401/840 (47%), Gaps = 79/840 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + SWLK + TD + +++ LT+IGLEVE ++ +A L I VLS ++P Sbjct: 1 MKISYSWLKQFIQTDQTPQELSLILTNIGLEVESLETVQAVAGGLEGLVIGHVLSCVQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + +D G + +Q+VCGAPNV G V A G+ + N +N KIRG Sbjct: 61 NADRLRVTTVDVGGPEILQIVCGAPNVAQGQKVVVATVGTTVYPNEGEPFKINKSKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII-DVSLTPNRSDCIGV 171 S GM+C+E E+ L IM LP DA VG Y +L D + ++ LTPNR+D Sbjct: 121 VSEGMICAEDEIGLGISHDGIMVLPEDAQVGTPAKVYFKLEDDFLYEIGLTPNRADAASH 180 Query: 172 RGIALDLVAAGLGKLKEINIS-CPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A DL A ++ +IS ES+ +++K ++D++ ++ + GV + Sbjct: 181 LGVARDLAAYFRTDIRMPDISGFKADEESLLIDVK--VEDTAAAPRYSSVTISGVTVKAS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKILA 289 P+W++ +LK +G+R I+ +VDITNYV D G P H FDA +I + + C+ G + Sbjct: 239 PDWLQNKLKVIGIRPINNIVDITNYVLHDLGVPLHAFDADQIKGAKVIVKKCAAGTPFVT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E LS ++++I + IAG+ GGK +G D TT++ +E A ++ +++ ++ K Sbjct: 299 LDGVERKLSAEDLMICNAEEPMCIAGVFGGKSSGISDTTTNIFLESAYFNAVSVRKTSKR 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMN 408 + TD+ +RFERG D + LK LI L G +S + KP ++ Sbjct: 359 HSLKTDASFRFERGTDPDMTVVALKRAALLIAELGNGKISSPVSDIYPEPVKPYEVDVNY 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + RL G ++P E+ I+ LG V E D + VP+++ DV + D+ EE+LRIY Sbjct: 419 SNINRLIGAEIPAEEIKAIIIALGIHVAAETADGLSLKVPAFKVDVTRECDITEEVLRIY 478 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQS------RTRYV-KRVLASRAMMEVVNWSFISKEQ 520 G + I ++ K N SL S +T++V +L + +E+ W S + Sbjct: 479 GYNNI--------EIPSKINASLSYSSKPDKEQTQHVIADMLTANGFLEI--WCN-SLTK 527 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 ++ILNP+S+D++ MR LL L++ N +R AD +E Y Sbjct: 528 GAYSKAPDEAVQILNPLSSDLNVMRQELLMPALESVAYNQNRKTADIKFYEFGKTY---- 583 Query: 581 PEGQKYMAAG--IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF----VS 634 ++ AG + + I SG +++ ++ V + KA +VI Sbjct: 584 -----HLIAGKYVERPRLLILLSGNNQAEQWNQKPAPVSFYHLKAAVDAVIGRLGIATYQ 638 Query: 635 LDSLRFESGAPSW-YHPGRSGIIK----------TSAEIVLGYFGEFHPNILDFFGLSNP 683 L+ ++ E A Y G ++ + Y+ +F +L N Sbjct: 639 LEEVKDERFAFGLRYFRGDKTLVSFGAATAADKKKADVDKDVYYADFDWALLLDLVRKNK 698 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL 743 I EV P ++ LS L V D+ F + I T +I+NV Sbjct: 699 IVNKEV--PKYPAVRRD---------LSML--VDTDVTFDTLKSIAFKTEKKLIRNVQ-- 743 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 VFDV+ G L GKKS A+ +Q + T D I +M +I+ N+ + NA +R Sbjct: 744 -----VFDVYIGDKLPAGKKSYALNFTLQDEEQTLTDKQIDAVMQKIMHNLAQTVNAEIR 798 >gi|262202741|ref|YP_003273949.1| phenylalanyl-tRNA synthetase subunit beta [Gordonia bronchialis DSM 43247] gi|262086088|gb|ACY22056.1| phenylalanyl-tRNA synthetase, beta subunit [Gordonia bronchialis DSM 43247] Length = 824 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 250/853 (29%), Positives = 395/853 (46%), Gaps = 79/853 (9%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVER 54 M+ SW + L + ++ + +G E+E ++ ++ P I +V S+E Sbjct: 1 MRAPQSWYTEVLRQGDPAWSATAAEVDEGFVRVGFEIEDIEPFPQITGPLVIGRVASIEE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 P+ I ++ G+ + +VCGA N G L V A PG+ +P I + RK G Sbjct: 61 LPEFKKPIRFCTVEVGEAEPRGIVCGARNFAEGDLIVAALPGTVLPGPFEIAS-RKTYGR 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + D + I+ L P A G + L L D IDV++TP+R V Sbjct: 120 ISDGMICSVSELGIGTDHSGILVLAPATAEPGADAREVLGLDDTAIDVNVTPDRGYAFSV 179 Query: 172 RGIALDLVAA-GLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNN 228 RG+ +L + G+ + L++ E P + +DD S + + GV Sbjct: 180 RGLGRELAGSFGVPFVDPAQAEEALATAEGEPWPVA--IDDESQATRYTARLITGVDATA 237 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 V+P WM++RL G+R ISA+VD+TNYV L+ G P H FDA R+S +TVR A +GEK+ Sbjct: 238 VSPWWMQKRLLVAGVRPISAIVDVTNYVMLELGQPLHAFDADRVSGTVTVRPARAGEKLT 297 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L P++VVIA + ++AG++GG D TT VL+E A +DP+ + R+GK Sbjct: 298 TLDGTDRVLDPEDVVIADETGPIALAGVMGGAATEVGDETTRVLLEAATFDPVRVFRTGK 357 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFM 407 + +++ RFER VD +LI+ + GG AS + A+ I Sbjct: 358 RHKLTSEASKRFERSVDPAITAAASDRAAALIVEIAGGQIASPLSEAQVTVPAIPDITIA 417 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 E R +GI P + L +G V G D VS P+WR D+ ++ADLVEE+LR+ Sbjct: 418 ADEPDRTAGISYPPGTTAARLTEVGCVVTG-TDPLLVSPPTWRPDLRQRADLVEEVLRLE 476 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF--- 524 G+++I P + L+ Q R R + R LA +EV+ + F+ + Sbjct: 477 GLERI---PAVVPHAPAGTGLTAGQRRRRSLGRSLALNGYVEVLPYPFMPANVFDTWDLP 533 Query: 525 --GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 +R + +LNP+ AD ++ T+LLPGLL+ RN+ R D ++ + V + Sbjct: 534 ADDDRRRTVGVLNPLEADRPDLNTTLLPGLLEMAARNIARGQRDLGLYTIGQVVLATDTM 593 Query: 580 TPEG----------------------QKYMAAGIRKG---SSGIEGSGRLWSDKSEERCR 614 TP G Q A + G +G G GR Sbjct: 594 TPVGPIDVNRRPTDDEIAALDASLPDQPLHVAVVLTGLRDPAGPWGPGRA--------AD 645 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 ++D F+A VS+D L + P +HPGR + + +GY GE HP + Sbjct: 646 YLDAFEAARTIGRAAG--VSID-LSADDHKP--WHPGRCARLTVDG-VTVGYAGELHPTV 699 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKT----KKVVHLSSLHPVKRDLAFIVDQHIPA 730 L+ GL +C EV +D++P++ T V+ ++ A V + + A Sbjct: 700 LERLGLPPRVCAVEVDVDALPLTTVLPAPTVSAFPAVLQDVAVVVADDVPAAEVGEALRA 759 Query: 731 GTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 G L++ + +FDVF G +G G KS+ + + T +D+ Sbjct: 760 G--------AGDLLESIELFDVFTGDQVGAGNKSLTFALRFRAGDRTLTEDEANAAKLSA 811 Query: 791 VENVVKKTNAVLR 803 V+ ++ A LR Sbjct: 812 VDEAGRRVGARLR 824 >gi|223985205|ref|ZP_03635290.1| hypothetical protein HOLDEFILI_02596 [Holdemania filiformis DSM 12042] gi|223962822|gb|EEF67249.1| hypothetical protein HOLDEFILI_02596 [Holdemania filiformis DSM 12042] Length = 797 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 226/822 (27%), Positives = 408/822 (49%), Gaps = 45/822 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M+ +++WLK++++ D V+ E + + LT GLEVE ++ + I +VL+ E +PD D Sbjct: 1 MRMSMNWLKEYVNLDGVTPEVLAEKLTIAGLEVEGIEKMAEGTNLVIGQVLTCENHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + + +VCGAPNVR G + + G+ + + K+RG+ES GM+ Sbjct: 61 HLHVTTVNVGD-EVLNIVCGAPNVRAGQKVIVSKVGAVLA-GGFEIKPAKVRGVESNGMI 118 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVG-GRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL + + + I +APVG R+ +YL L D I+D+ LTPNR+DC + Sbjct: 119 CSLSELGVDKKAQTEEQLNGIYVFDDEAPVGETRVLEYLGLDDTILDIGLTPNRADCNAM 178 Query: 172 RGIALDLVAAGLGKLKEINISCP--LSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNN 228 +A ++ G + ++ P S+ I F + + C F V V+ Sbjct: 179 WNLAKEV-----GAVLHRKVTWPDCKSASQIGTPNTFKVASKTEKCPTFLGKVVNHVKVG 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 +P W+ L A G++SI+ +VDI+N+V ++ G P H +D S++ + Sbjct: 234 PSPKWLSNYLHAYGIKSINNVVDISNFVMVETGQPLHYYDLSKLPHHEITVVDDVEMTMQ 293 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 ALD Q+Y++ +++I + G IAGI+GG+ + D++TT + +E A ++ ++I + + Sbjct: 294 ALDGQDYEIKKGDLLITTGGEPTGIAGIMGGEESKIDESTTSIFIEAAGFNAVSIRNTSR 353 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 LG+ T++ F +GV+ I + V L+ L + + P K V Sbjct: 354 RLGLSTEAAMHFTKGVEPMAPIKAVDRSVQLLKELAEADGFEENVLVGTIEDPVKTVSET 413 Query: 409 -SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G + ++ L +L+ L + + + D F ++PS+R D+ + D+ EEI+R+ Sbjct: 414 LTHCNTLLGTEFTMDQVLGVLKDLDLNPVQDGDCFTCTIPSYRTDLNIREDIDEEIIRLL 473 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ--SVLFG 525 G + +K+ LP + + L+ +Q+ R ++ L + EV+ ++ +S++ + L Sbjct: 474 GYEDLKT-TLPTMEATAGQ-LTDRQTMRRNLRSSLNGLGLSEVITYTLVSQKAVDNALMP 531 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 G+ + + P+S + +RTSL+ LL+ N + + +FE+S+VY +T Q+ Sbjct: 532 LGEA-VALAAPMSEERKYVRTSLIMSLLECLAYNQNHKNENVNLFEISNVYAVNTQ--QE 588 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGA 644 +A I S L S K D F AK + + + L F+ Sbjct: 589 RLA---------IVMSDSLQSSKLNRIDIRSDFFAAKGVLTETLRKLGFAAERLSFKEND 639 Query: 645 P--SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +HP RS + ++ LG GE HP + G+ + G E L+ + S+ + Sbjct: 640 QDVEHFHPYRSACVMLGNQL-LGVLGEIHPVLAKELGIGKVVYG-EFNLELLLASKASKV 697 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEG 761 K + ++H RD+A +V++ + A L+ IK R++ V VFDV+QG+ + G Sbjct: 698 KFTAINRFPAVH---RDIALVVNEEVKAEQLMKAIKAAGKRMVKQVEVFDVYQGEHVESG 754 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKSVA+ + Q T D +I+ + ++ + K AVLR Sbjct: 755 KKSVALSINYQSEDHTLTDQEIQDVHQTVLARLEKDCQAVLR 796 >gi|300858368|ref|YP_003783351.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium pseudotuberculosis FRC41] gi|300685822|gb|ADK28744.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium pseudotuberculosis FRC41] Length = 836 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 244/836 (29%), Positives = 381/836 (45%), Gaps = 111/836 (13%) Query: 16 VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTGK 69 V+ E++ +G E E E P + +V ++E + P C + + Sbjct: 21 VTPEELDAGYVRVGFETEGYKKIAETTGPLVLGRVETIEELTGFKKPIRHCHVNVGNANG 80 Query: 70 HQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 ++Q +VCGA N G L V + PG+ +P N ++ R+ G S GM+CS EL L+D Sbjct: 81 TGDLQSIVCGARNFSEGDLVVVSLPGAVLP-GNFAISARETYGRMSAGMICSAAELGLAD 139 Query: 129 DSAS-IMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA----- 181 S I+ LP G L L D I DV++TP+R + RG+ +L +A Sbjct: 140 KQNSGIITLPEGTGTPGDDARGILGLEDTIFDVNVTPDRGYALSARGLTRELASAFNLEY 199 Query: 182 --GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRL 238 LK I + + DL + F + V G+ +P W+++ L Sbjct: 200 ADPAVDLKVAGIDVSAVPTATNQSLSVDLRPETKAVRFGLRKVTGIDPTAESPFWLQREL 259 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G R ++ D+TNYV L G P H FDA I+ L VR A +GE++ LD+ + L Sbjct: 260 MLSGQRPVNPATDVTNYVMLLLGQPMHAFDADAITGDLVVRCAHAGEQLETLDHVKRTLM 319 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 ++VVIA +QS+AG++GG + + TT+V E A WDPI IAR+ + + T++ Sbjct: 320 AEDVVIADAVGVQSLAGVMGGNISEISETTTNVYFEAANWDPITIARTSRRHKLSTEASR 379 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGT----------ASDICIARNITYKPRKIVFMN 408 RFERGVD + L +L++S+ GG S + R + ++P I Sbjct: 380 RFERGVDPTLVEVALDAACALLVSIAGGMIEPERTLIGEVSAMTKVRMLAHRPAAI---- 435 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +G+D E + LE +G V E D+ V+ P WR D+ ADLVEE+LR+ G Sbjct: 436 ------AGVDYSPETVVSRLEEVGCFVEREEDELIVTPPMWRHDITMAADLVEEVLRLEG 489 Query: 469 VDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 ++ I S P P+ LS Q R R + LA E++ FI + L+G Sbjct: 490 LEHIPSIVPPAPVGA-----GLSPAQKRRRAIGHSLAYNGYAEILPTPFIKSDTFDLWGL 544 Query: 526 ----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--- 578 + +++ NP+ +D + + T+LLP +L+A RNV R ++F + V N Sbjct: 545 LVDDARRNVVKVQNPLDSDYAILATTLLPSMLEAVARNVSRGQHSVSLFGLQQVAFNRGQ 604 Query: 579 ---------------DTPE------GQKYMAAGIRKG---SSGIEGSGR-------LWSD 607 D E Q A + G + G G GR L S Sbjct: 605 GVSPILDVRTRPRAEDVQELLQSLPYQPLHVATVATGQIENEGPWGQGRDYTYADSLESA 664 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 ++ R V+L + AD L +HPGR ++ + V+GY Sbjct: 665 RTVARAAGVELEVSNADYLP--------------------WHPGRCAELRV-GDAVVGYA 703 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ILD GL C E+ + +IP LS+ + +DLA +VD+ Sbjct: 704 GELHPQILDRLGLPPRTCAMELDITAIPFDNDFPAPV-----LSAFPTLHQDLALVVDED 758 Query: 728 IPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 +PA ++ I++ L++ V +FDV++ SLGE KKS+A ++ + T D++ Sbjct: 759 VPAESVRKVIVEAAGELLEKVELFDVYRSDSLGENKKSLAFSLVFRAQDRTLTDEE 814 >gi|302206083|gb|ADL10425.1| Putative phenylalanyl-tRNA synthetase subunit beta [Corynebacterium pseudotuberculosis C231] gi|302330636|gb|ADL20830.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium pseudotuberculosis 1002] gi|308276321|gb|ADO26220.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium pseudotuberculosis I19] Length = 836 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 244/836 (29%), Positives = 381/836 (45%), Gaps = 111/836 (13%) Query: 16 VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-----RNPDLDCAILRIDTGK 69 V+ E++ +G E E E P + +V ++E + P C + + Sbjct: 21 VTPEELDAGYVRVGFETEGYKKIAETTGPLVLGRVETIEELTGFKKPIRHCHVNVGNANG 80 Query: 70 HQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 ++Q +VCGA N G L V + PG+ +P N ++ R+ G S GM+CS EL L+D Sbjct: 81 TGDLQSIVCGARNFSEGDLVVVSLPGAVLP-GNFAISARETYGRMSAGMICSAAELGLAD 139 Query: 129 DSAS-IMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA----- 181 S I+ LP G L L D I DV++TP+R + RG+ +L +A Sbjct: 140 KQNSGIITLPEGTGTPGDDARGILGLEDTIFDVNVTPDRGYALSARGLTRELASAFNLEY 199 Query: 182 --GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRL 238 LK I + + DL + F + V G+ +P W+++ L Sbjct: 200 ADPAVDLKVAGIDVSAVPTATNQSLSVDLRPETKAVRFGLRKVTGIDPTAESPFWLQREL 259 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G R ++ D+TNYV L G P H FDA I+ L VR A +GE++ LD+ + L Sbjct: 260 MLSGQRPVNPATDVTNYVMLLLGQPMHAFDADAITGDLVVRCAHAGEQLETLDHVKRTLM 319 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 ++VVIA +QS+AG++GG + + TT+V E A WDPI IAR+ + + T++ Sbjct: 320 AEDVVIADAVGVQSLAGVMGGNISEISETTTNVYFEAANWDPITIARTSRRHKLSTEASR 379 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGT----------ASDICIARNITYKPRKIVFMN 408 RFERGVD + L +L++S+ GG S + R + ++P I Sbjct: 380 RFERGVDPTLVEVALDAACALLVSIAGGMIEPERTLIGEVSAMTKVRMLAHRPAAI---- 435 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +G+D E + LE +G V E D+ V+ P WR D+ ADLVEE+LR+ G Sbjct: 436 ------AGVDYSPETVVSRLEEVGCFVEREEDELIVTPPMWRHDITMAADLVEEVLRLEG 489 Query: 469 VDQIKS--EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG- 525 ++ I S P P+ LS Q R R + LA E++ FI + L+G Sbjct: 490 LEHIPSIVPPAPVGA-----GLSPAQKRRRAIGHSLAYNGYAEILPTPFIKSDTFDLWGL 544 Query: 526 ----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN--- 578 + +++ NP+ +D + + T+LLP +L+A RNV R ++F + V N Sbjct: 545 PVDDARRNVVKVQNPLDSDYAILATTLLPSMLEAVARNVSRGQHSVSLFGLQQVAFNRGQ 604 Query: 579 ---------------DTPE------GQKYMAAGIRKG---SSGIEGSGR-------LWSD 607 D E Q A + G + G G GR L S Sbjct: 605 GVSPILDVRTRPRAEDVQELLQSLPYQPLHVATVATGQIENEGPWGQGRDYTYADSLESA 664 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 ++ R V+L + AD L +HPGR ++ + V+GY Sbjct: 665 RTVARAAGVELEVSNADYLP--------------------WHPGRCAELRV-GDAVVGYA 703 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP ILD GL C E+ + +IP LS+ + +DLA +VD+ Sbjct: 704 GELHPQILDRLGLPPRTCAMELDITAIPFDNDFPAPV-----LSAFPTLHQDLALVVDED 758 Query: 728 IPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 +PA ++ I++ L++ V +FDV++ SLGE KKS+A ++ + T D++ Sbjct: 759 VPAESVRKVIVEAAGELLEKVELFDVYRSDSLGENKKSLAFSLVFRAQDRTLTDEE 814 >gi|260584138|ref|ZP_05851886.1| phenylalanyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] gi|260158764|gb|EEW93832.1| phenylalanyl-tRNA synthetase, beta subunit [Granulicatella elegans ATCC 700633] Length = 806 Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 408/827 (49%), Gaps = 45/827 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 MK + WL ++LD + ++ +++ + ++ G+EV+ V E LS + + L V +PD Sbjct: 1 MKLSYEWLNEYLDLSSITPQELGEKMSRTGIEVDSVSVPGEGLSGLVVGRALEVVDHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ +D + + +Q+VCGAPN+ G + A G+ I + I K+RG+ S GM Sbjct: 61 DHLHVVTVDVAEEEPLQIVCGAPNIAKGQKIIVATHGARIAGGHKIKR-GKLRGVVSQGM 119 Query: 118 MCSEKELML------SDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 +CS +EL L + I DA VG L L I+++ +T NR+D + Sbjct: 120 ICSLQELGLPSSLVPKEYEQGIYVFEDDAIEVGMDAVKALALDSAIVELDITANRADALS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLS--------SESIPLEIKFDLDDSSLCKGFAMCCV 222 +RG ++ A N+ L+ S S+ + ++D + + + Sbjct: 180 IRGSVHEIGAI-------YNLENTLTPDEFLEGGSSSLDPWMTVSVEDEVDTPAYHLQII 232 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 K V +P WM+ RL A G+R I+ +VD+TNYV ++ G P H FD R+ S + VRRA Sbjct: 233 KNVTVKPSPQWMQNRLIAAGVRPINNIVDVTNYVLMEYGQPLHAFDYDRLNSKQIHVRRA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 E ++ LD E LS N ++ +DG + ++AG++GG + + TT V +E AL++P Sbjct: 293 KECETLVTLDGVERTLS--NEIVITDGEKPVALAGVMGGLDSEIIETTTTVALESALFEP 350 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITY 399 I + + + ++S RFE+G++ ++ K +LI L G + + A+++T Sbjct: 351 KAIRLASQKHNLRSESSSRFEKGINKATILQAGKRAAALIAELGDGEVVEGVASAQSLTL 410 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 + + + + G + E+ L++ ++L + E F V+VP+WR D+ +ADL Sbjct: 411 ELPVVSISLERLNHVLGTSLSTEEVLQVFKQLAYPTKEEEGVFHVTVPAWRFDISIEADL 470 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VEE+ RIYG D+I S LP T + L+ +Q R+ ++ + + + +++ + E Sbjct: 471 VEEVGRIYGYDKIPS-TLP-TTASTQGGLTEKQRFVRWTRQFMQGAGLSQSYSYALTTPE 528 Query: 520 QSVLFGGGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 +S F +R + + P+S + S +R S+LP LL+A NV R+ + +FEV V+ Sbjct: 529 KSHWFTVEERPSIRLDLPMSEERSELRQSMLPSLLEALQYNVARSQQNVRLFEVGKVFSI 588 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + + + + E W ++ VD F K + D + Sbjct: 589 GKDGSEDFQEREVIGAAVTGEWGHASWQSPAQP----VDFFALKGVLEAYFAELNCSDRI 644 Query: 639 RF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 RF + A HPG++ I E++ G+ G+ HP I LS+ FE+ ++ + Sbjct: 645 RFVATDAIGQLHPGQTAYIYLGEELI-GFIGKIHPVIQKELDLSDTFV-FELLVEPLLAE 702 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + + V S+ RD+A +V + TL +IK + + VT+FDV++G+ Sbjct: 703 GLQERVIQSVPKFPSM---TRDIALLVPVSMAHATLEAVIKEQAGQYLQSVTLFDVYKGE 759 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EG +S+A + + T ++++I+ MDRI +V + +R Sbjct: 760 HVQEGYQSLAYSIRFLNKEATLQEEEIKQAMDRIQTALVALDDVTIR 806 >gi|313624044|gb|EFR94128.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria innocua FSL J1-023] Length = 802 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 227/826 (27%), Positives = 412/826 (49%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEEEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYADGIYVLPEHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPTETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKDQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + + TT V +E A++ ++ + Sbjct: 295 EITTLDGEKRILQTGHTVITNGTEPIAIAGVMGGEFSEVTETTTTVALEGAIFSSSSVGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASXELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNRAKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G ++ + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTEISLSEIETIFDRLGFVLEVKEDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTADWQKTPKPVDFFVLKGIVEGLVNKLGIEAELH 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I + + GY G HP + + L FE+ + ++ Sbjct: 643 WKQIEKEELHPGRTASIHLEGKEI-GYLGALHPAVEASYDLKETYV-FEINVKAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ T+ +IK + L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHXXXRYPEMTRDLALLVDKDTDHATISQVIKEHGGNLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + K +A++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQAKLHAIIR 802 >gi|295092076|emb|CBK78183.1| phenylalanyl-tRNA synthetase beta subunit [Clostridium cf. saccharolyticum K10] Length = 815 Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 251/853 (29%), Positives = 402/853 (47%), Gaps = 87/853 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGYECLDKNLDKIVVGQITEIERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D + ++D G Q+V GAPNV+VG L G V PE + + K+ Sbjct: 61 DKLVVCQVDLGG-TSTQIVTGAPNVKVGQKVPVVLDGGRVAGDHDGGRPEGGIRIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL S + I P D VG + L L D + + +T Sbjct: 120 RGVESNGMMCSIEELGSSREMYPEAPEQGIYIFPEDTEVGSDAIEALGLRDVVFEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + AA GK E I + E I +K ++++ LC + V Sbjct: 180 NRVDCYSVIGIARE-AAATFGKTFCEPEIKKTGNGEDIHDFLKVSVENTELCPRYCARMV 238 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P+WMR+RL A G+R I+ +VDITNYV + G P H +D +I+ + V+ A Sbjct: 239 KNIKLGPSPDWMRRRLAASGIRPINNIVDITNYVMEEYGQPMHAYDYDQIAGQQIVVKCA 298 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE LD QE L ++I + IAGI+GG+++ DN ++ E A +D Sbjct: 299 QDGEVFETLDGQERKLDSQILMINDGEKAVGIAGIMGGENSKITDNVKTMVFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + + Sbjct: 359 NIRLSAKRVGLRTDASGKFEKGLDPNTAELAINRACQLIEELGAGEVVGGMIDVYPVKRE 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++ F ++ RL G ++ D + L+ SV EYD E+ VPSWRQDV AD Sbjct: 419 GNRVPFEPEKINRLLGTNIDRADMISYLK----SVELEYDAATEEIVVPSWRQDVHRMAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 + EE+ R YG D I + LP + + LS + +R+ + + +SF S Sbjct: 475 VAEEVARFYGYDVIPT-ALPTGEATAGK-LSFKLRVEEVARRIAEFCGFSQSMTYSFESP 532 Query: 518 --------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 E S L +R + I NP+ D S MRT+ L G+L + N +R D + Sbjct: 533 KVFDRLLIPEDSTL----RRVVTISNPLGEDFSIMRTTPLNGMLTSLATNYNRRNKDVRL 588 Query: 570 FEVSHVY--ENDTPEGQKYMAAGI-------RKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 +E++ +Y D+ + G+ ++ + G+ G G D F Sbjct: 589 YELATIYLPAEDSVSKEYLEQTGLPMLPDERQQFTLGMYGEG--------------DFFT 634 Query: 621 AKADALSVIEPFVSLDSL----RFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 K V+E F+ L R+ A S+ HPGR I + + V+GY GE HP++ Sbjct: 635 MKG----VVEEFLEKIGLNKKPRYNPEAGKSFLHPGRQAEI-SYGDTVIGYMGEIHPDVA 689 Query: 676 DFFGLSNPICGFEVYLDS---IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 D + + + LD IP++ T K ++ V RD++ ++ + + AG Sbjct: 690 DNYKIGER--AYVAVLDMPNLIPLA----TFDHKYEGIAKYPSVTRDISMVMKKEVLAGQ 743 Query: 733 LVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + II+ ++++ +FDV++G + G KSVA + + T + ++ M +I+ Sbjct: 744 IEEIIEQRGGKILESYKLFDVYEGSQITAGYKSVAYSITFRSKDHTLEEKEVASAMQKIL 803 Query: 792 ENVVKKTNAVLRS 804 N ++ LRS Sbjct: 804 -NGLQGLGIELRS 815 >gi|313793840|gb|EFS41869.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL110PA1] gi|313801230|gb|EFS42488.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL110PA2] gi|313840040|gb|EFS77754.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL086PA1] gi|314963800|gb|EFT07900.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL082PA1] gi|315079652|gb|EFT51642.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL053PA2] gi|327452172|gb|EGE98826.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL092PA1] Length = 839 Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 245/867 (28%), Positives = 397/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEE R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEETGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|283797696|ref|ZP_06346849.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium sp. M62/1] gi|291074590|gb|EFE11954.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium sp. M62/1] Length = 815 Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 251/853 (29%), Positives = 402/853 (47%), Gaps = 87/853 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGYECLDKNLDKIVVGQITEIERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D + ++D G Q+V GAPNV+VG L G V PE + + K+ Sbjct: 61 DKLVVCQVDLGG-TSTQIVTGAPNVKVGQKVPVVLDGGRVAGDHDGGRPEGGIRIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL S + I P D VG + L L D + + +T Sbjct: 120 RGVESNGMMCSIEELGSSREMYPEAPEQGIYIFPEDTEVGSDAIEALGLRDVVFEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + AA GK E I + E I +K ++++ LC + V Sbjct: 180 NRVDCYSVIGIARE-AAATFGKTFCEPEIRKTGNGEDIHDFLKVSVENTELCPRYCARMV 238 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P+WMR+RL A G+R I+ +VDITNYV + G P H +D +I+ + V+ A Sbjct: 239 KNIKLGPSPDWMRRRLAASGIRPINNIVDITNYVMEEYGQPMHAYDYDQIAGQQIVVKCA 298 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE LD QE L ++I + IAGI+GG+++ DN ++ E A +D Sbjct: 299 QDGEVFETLDGQERKLDSQILMINDGEKAVGIAGIMGGENSKITDNVKTMVFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + + Sbjct: 359 NIRLSAKRVGLRTDASGKFEKGLDPNTAELAINRACQLIEELGAGEVVGGMIDVYPVKRE 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++ F ++ RL G ++ D + L+ SV EYD E+ VPSWRQDV AD Sbjct: 419 GNRVPFEPEKINRLLGTNIDRADMISYLK----SVELEYDAATEEIVVPSWRQDVHRMAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 + EE+ R YG D I + LP + + LS + +R+ + + +SF S Sbjct: 475 VAEEVARFYGYDVIPT-ALPTGEATAGK-LSFKLRVEEVARRIAEFCGFSQSMTYSFESP 532 Query: 518 --------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 E S L +R + I NP+ D S MRT+ L G+L + N +R D + Sbjct: 533 KVFDRLLIPEDSTL----RRVVTISNPLGEDFSIMRTTPLNGMLTSLSTNYNRRNKDVKL 588 Query: 570 FEVSHVY--ENDTPEGQKYMAAGI-------RKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 +E++ +Y D+ + G+ ++ + G+ G G D F Sbjct: 589 YELATIYLPAEDSVSKEYLEQTGLPMLPDERQQFTLGMYGEG--------------DFFT 634 Query: 621 AKADALSVIEPFVSLDSL----RFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 K V+E F+ L R+ A S+ HPGR I + + V+GY GE HP++ Sbjct: 635 MKG----VVEEFLEKIGLNKKPRYNPEAGKSFLHPGRQAEI-SYGDTVIGYMGEIHPDVA 689 Query: 676 DFFGLSNPICGFEVYLDS---IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 D + + + LD IP++ T K ++ V RD++ ++ + + AG Sbjct: 690 DNYKIGER--AYVAVLDMPNLIPLA----TFDHKYEGIAKYPSVTRDISMVMKKEVLAGQ 743 Query: 733 LVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + II+ ++++ +FDV++G + G KSVA + + T + ++ M +I+ Sbjct: 744 IEEIIEQRGGKILESYKLFDVYEGSQITAGYKSVAYSITFRSKDHTLEEKEVASAMQKIL 803 Query: 792 ENVVKKTNAVLRS 804 N ++ LRS Sbjct: 804 -NGLQGLGIELRS 815 >gi|38233756|ref|NP_939523.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium diphtheriae NCTC 13129] gi|66773916|sp|Q6NHH1|SYFB_CORDI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|38200017|emb|CAE49686.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium diphtheriae] Length = 836 Score = 291 bits (744), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 247/843 (29%), Positives = 391/843 (46%), Gaps = 90/843 (10%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + +W+ + L D VS ++ +G E E E P I +V ++E Sbjct: 1 MLISQNWVTELLGRSNPDWKVSPAELDSGYVRVGFETEGYSAIPETTGPLVIGRVETIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D E+Q +VCGA N + G V + PG+ +P N ++ R+ Sbjct: 61 LEGFKKPIRHCFVNVGDANGTGELQSIVCGARNFQEGSYVVVSLPGAVLP-GNFAISARE 119 Query: 109 IRGIESTGMMCSEKELMLSDDSAS-IMELPID-APVGGRLSDYLELSDPIIDVSLTPNRS 166 G S GM+CS EL LSD S I+ LP + A G + L D + DV++TP+R Sbjct: 120 TYGRMSAGMICSAAELGLSDKQNSGIITLPNEIAEPGTDARSIVGLDDTVFDVNITPDRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKE----INIS------CPLSSESIPLEIKFDLDDSSLCKG 216 + RG+ +L +A K + +N++ P SS + IK DL + + Sbjct: 180 YALSARGLTRELASAFNLKFVDPAVDLNVAGVDTSDVPESSGEL---IKVDLRPETQARR 236 Query: 217 FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F + V G+ P WM++ L G R ++A D+TN+V L G P H FDA+ I Sbjct: 237 FGVRKVSGIDPKAPTPFWMQRELMLSGQRCVNAATDVTNFVMLLLGQPMHAFDANLIKGG 296 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 L VR A GE LD+ + LS ++VVI+ D IQS+AG++GG + D TTDV E Sbjct: 297 LVVRNALEGESFETLDHVKRTLSAEDVVISDDTGIQSLAGVMGGTTSEISDETTDVFFEA 356 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A W PI AR+ + + T++ RFERGVD + + L +L++S+ GG+ Sbjct: 357 ANWHPITTARTSRRHKLSTEASRRFERGVDPEIIEVALDVACALLVSIAGGSVESARTLI 416 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 +I S L+G+ + L+ +G +V + D V+ P+WR D+ Sbjct: 417 GSAPSMPQIRMKTSRPAELAGVAYSDATVIARLKEVGCAVEVDGDDLLVTPPTWRPDMTM 476 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 ADLVEE+LR+ G++ I + +PL V LS Q R R + LA E++ F Sbjct: 477 SADLVEEVLRLEGLEDIPTI-VPLAPV--GSGLSPAQLRRRAIGHALAYSGYAEILPTPF 533 Query: 516 ISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 I + ++G + + + NP+ A+ + T+LLP +L+A RNV R +F Sbjct: 534 IRNDTFDVWGLAADDERRSVVTVQNPLDAEYGVLATTLLPSMLEAVTRNVSRGQTSVNLF 593 Query: 571 EVSHV------------------YENDTPE------GQKYMAAGIRKGSSGIE---GSGR 603 + V +N+ E Q A + G +E G GR Sbjct: 594 GLQQVSFKRGSGISPMLDVRQRPSDNEVAELLNSLPVQPLHVATVGAGFMELEGPWGHGR 653 Query: 604 LWSDKSEERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 +S F D ++ A A V L E+ +HPGR +K Sbjct: 654 TYS--------FADAIESARVVARAAGV--------ELNVENVEMLPWHPGRCAALKAGD 697 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 IV GY GE HP I++ L C E+ + ++P+ + LS+ + +DL Sbjct: 698 HIV-GYAGELHPQIVEALNLPARTCAMELDVSALPLKESFPAPV-----LSAFPVLHQDL 751 Query: 721 AFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A +VD+ +PA ++ +I++ L++ V +FDV++ ++LG KKS+A + + T Sbjct: 752 ALVVDESVPAESVRKVIEDAAGELLEKVELFDVYRSEALGAEKKSLAFSLEFRAQDRTLT 811 Query: 780 DDD 782 DD+ Sbjct: 812 DDE 814 >gi|300856604|ref|YP_003781588.1| phenylalanyl-tRNA synthetase subunit B [Clostridium ljungdahlii DSM 13528] gi|300436719|gb|ADK16486.1| phenylalanyl-tRNA synthetase, subunit B [Clostridium ljungdahlii DSM 13528] Length = 793 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 228/825 (27%), Positives = 404/825 (48%), Gaps = 53/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK + WLKD++ D+ +++ D LT G ++E+ + + + K++ +E +P D Sbjct: 1 MKVPVKWLKDYVKIDIPGKELGDRLTLSGSKLEEAIVTGDEIQNVVTGKIMKIESHPQAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK + IQ++ A N++ + A S + + + K+RG+ S GM Sbjct: 61 KLVVCQVDIGKEEPIQIITAATNMKEQDIVPVALHDSTL-HGGVKIKKGKLRGLMSNGMF 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M L D P+G + + L+++ I+D +T NR DC+ + G+A Sbjct: 120 CSEEELGIAGDKPVYGLMILKEDTPIGKDIKEVLDMTSTILDFEITSNRPDCLSIIGMAR 179 Query: 177 DLVAAGLG---KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 + AA L K+ E++ P SE+I +K ++ D LCK + +K V+ +P+W Sbjct: 180 E-TAATLNESYKIPELDYK-PSCSENIQDTLKVEIKDK-LCKRYMARGIKDVKIEPSPSW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 M++RL G+R I+ +VDITN+V L+ G P H +D I S + V A GEK LD Sbjct: 237 MQERLLEAGVRPINNIVDITNFVMLEIGEPMHAYDVREIKSGTIVVDTAKDGEKFTTLDE 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L+ D + I R +AGI+GG ++ D+T+ ++ E A +D NI S + L + Sbjct: 297 EERQLNQDMLTIRDGDRTIGLAGIMGGLNSEIRDDTSSIVFECANFDGTNIRVSSQKLAL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEV 411 T++ RFE+ +D + +L+ L G + I + +P + ++ V Sbjct: 357 RTEASGRFEKDLDPNLAEIAMNRACNLVEMLKAGKVMEGTIDVYDEKIEPHSVDVDSNWV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++P E+ + L RL + D + VP++R D+ + D+ EE+ RIYG Sbjct: 417 NKFLGTEIPKENMVDYLNRLELKTQLKGDILHIDVPTFRGDINIREDVAEEVARIYGYSN 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQR 529 + + + +N +Q + L S + + +++SF+S++ +L + Sbjct: 477 VPTTVIESVSTRGGKN--PKQKLDDKLVETLISSGLNQSISYSFVSRKVFDKILLPEDSK 534 Query: 530 ---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---EN-DT-P 581 + I NP+ D S MRT+ L +++ GRN R +FE+ VY EN DT P Sbjct: 535 LRNAIAIKNPLGEDYSIMRTTTLASMMECLGRNYSRKNEIVRLFEIGRVYLPLENGDTLP 594 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 E + G+ C D F+ K ++++ + S + Sbjct: 595 EEDNIVTIGMYG------------------EC---DYFNLKGIVENILDTLGIEKISFKR 633 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ES P+ +HPGR+ + + ++ G GE HP + + +G+ E+ LD + + Sbjct: 634 ESDNPT-FHPGRTAALYVNRKLA-GVLGEIHPTVCENYGIDERCYIAELNLD---VLYEH 688 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLG 759 KK L V RDLA +VD +I + +II K +++ V +FDV++GK + Sbjct: 689 ADSDKKYRPLPKFPAVSRDLAVLVDDNIMVQEVEDIIRKQGGNILEKVKLFDVYRGKQIE 748 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GKKS+A + + T D ++ + +I+ ++ A LR Sbjct: 749 SGKKSIAYSISYRAENKTLTDKEVNKVHSKIIRSLEHNLGAQLRQ 793 >gi|16800254|ref|NP_470522.1| phenylalanyl-tRNA synthetase subunit beta [Listeria innocua Clip11262] gi|30316265|sp|Q92CI6|SYFB_LISIN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|16413644|emb|CAC96416.1| phenylalanyl-tRNA synthetase beta subunit [Listeria innocua Clip11262] Length = 802 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 227/826 (27%), Positives = 414/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEEEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYADGIYVLPEHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPTETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKDQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + + TT V +E A++ ++ + Sbjct: 295 EITTLDGEKRILQTGHTVITNGTEPIAIAGVMGGEFSEVTETTTTVALEGAIFSSSSVGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNREKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G ++ + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTEISLSEIETIFDRLGFVLEVKEDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTADWQKTPKPVDFFVLKGIVEGLVNKLGIEAELH 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I+ + + GY G HP + + L FE+ + ++ Sbjct: 643 WKQIEKEELHPGRTASIQLEGKEI-GYLGALHPAVEASYDLKETYV-FEINVKAL----L 696 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 TK K V H +P + RDLA +VD+ T+ +IK + L+ D+ +FD+F+G+S Sbjct: 697 DATKEKVVYHPIPRYPEMTRDLALLVDKDTDHATISQVIKEHGGNLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + K +A++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQAKLHAIIR 802 >gi|282854554|ref|ZP_06263889.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes J139] gi|282582136|gb|EFB87518.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes J139] gi|314981819|gb|EFT25912.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL110PA3] gi|315090687|gb|EFT62663.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL110PA4] gi|315104170|gb|EFT76146.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL050PA2] gi|327327986|gb|EGE69755.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL103PA1] Length = 839 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 246/867 (28%), Positives = 397/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDDEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNPGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDLGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGYNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALEARDAAVVRAEETCGAQLRS 839 >gi|295115121|emb|CBL35968.1| phenylalanyl-tRNA synthetase beta subunit [butyrate-producing bacterium SM4/1] Length = 802 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 246/839 (29%), Positives = 394/839 (46%), Gaps = 86/839 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGYECLDKNLDKIVVGQITEIERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D + ++D G Q+V GAPNV+VG L G V PE + + K+ Sbjct: 61 DKLVVCQVDLGG-TSTQIVTGAPNVKVGQKVPVVLDGGRVAGDHDGGRPEGGIRIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL S + I P D VG + L L D + + +T Sbjct: 120 RGVESNGMMCSIEELGSSREMYPEAPEQGIYIFPEDTEVGSDAIEALGLRDVVFEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + AA GK E I + E I +K ++++ LC + V Sbjct: 180 NRVDCYSVIGIARE-AAATFGKTFCEPEIKKTGNGEDIHDFLKVSVENTELCPRYCARMV 238 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P+WMR+RL A G+R I+ +VDITNYV + G P H +D +I+ + V+ A Sbjct: 239 KNIKLGPSPDWMRRRLAASGIRPINNIVDITNYVMEEYGQPMHAYDYDQIAGQQIVVKCA 298 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE LD QE L ++I + IAGI+GG+++ DN ++ E A +D Sbjct: 299 QDGEVFETLDGQERKLDSQILMINDGEKAVGIAGIMGGENSKITDNVKTMVFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + + Sbjct: 359 NIRLSAKRVGLRTDASGKFEKGLDPNTAELAINRACQLIEELGAGEVVGGMIDVYPVKRE 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 ++ F ++ RL G ++ D + L+ SV EYD E+ VPSWRQDV AD Sbjct: 419 GNRVPFEPEKINRLLGTNIDRADMISYLK----SVELEYDAATEEIVVPSWRQDVHRMAD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 + EE+ R YG D I + LP + + LS + +R+ + + +SF S Sbjct: 475 VAEEVARFYGYDVIPT-ALPTGEATAGK-LSFKLRVEEVARRIAEFCGFSQSMTYSFESP 532 Query: 518 --------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 E S L +R + I NP+ D S MRT+ L G+L + N +R D + Sbjct: 533 KVFDRLLIPEDSTL----RRVVTISNPLGEDFSIMRTTPLNGMLTSLSTNYNRRNKDVKL 588 Query: 570 FEVSHVY--ENDTPEGQKYMAAGI-------RKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 +E++ +Y D+ + G+ ++ + G+ G G D F Sbjct: 589 YELATIYLPAEDSVSKEYLEQTGLPMLPDERQQFTLGMYGEG--------------DFFT 634 Query: 621 AKADALSVIEPFVSLDSL----RFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 K V+E F+ L R+ A S+ HPGR I + + V+GY GE HP++ Sbjct: 635 MKG----VVEEFLEKIGLNKKPRYNPEAGKSFLHPGRQAEI-SYGDTVIGYMGEIHPDVA 689 Query: 676 DFFGLSNPICGFEVYLDS---IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 D + + + LD IP++ T K ++ V RD++ ++ + + AG Sbjct: 690 DNYKIGEK--AYVAVLDMPNLIPLA----TFDHKYEGIAKYPSVTRDISMVMKKEVLAGQ 743 Query: 733 LVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + II+ ++++ +FDV++G + G KSVA + + T + ++ M + Sbjct: 744 IEEIIEQRGGKILESYKLFDVYEGSQITAGYKSVAYSITFRSKDHTLEEKEVASAMQKF 802 >gi|84496730|ref|ZP_00995584.1| phenylalanyl-tRNA synthetase beta subunit [Janibacter sp. HTCC2649] gi|84383498|gb|EAP99379.1| phenylalanyl-tRNA synthetase beta subunit [Janibacter sp. HTCC2649] Length = 845 Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 244/849 (28%), Positives = 389/849 (45%), Gaps = 80/849 (9%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M +SWL++ D D I L +GLE E + + P + +VL+V+ P Sbjct: 1 MHAPVSWLRELADVPADAKGVDIAAALVRVGLEEEGLHGGDIAGPLVVGRVLTVQPEPQK 60 Query: 59 DCAILR---IDTGKHQEI-------QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + + +D G H ++ ++VCGA N G L V PG +P ++ RK Sbjct: 61 NGKTINWCTVDVGNHGQMVTEGKAQEIVCGAHNFAPGDLVVTVLPGGVLP-GGFEISARK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMEL-------------PIDAPVGGRLSDYLELSDP 155 G S GM+CS EL L +D I+ L P D + L L D Sbjct: 120 TYGHVSNGMICSAAELGLGEDHDGIIVLTQRLGEEAASSLQPGDDAIA-----LLGLGDE 174 Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLS-------SESIPLEIKFDL 208 +++V++TP+R C +RGIA + L +E L ++ L + L Sbjct: 175 VVEVNVTPDRGYCFSLRGIAREFA---LSTGREFRDPARLDVAEANGDGYAVSLADERPL 231 Query: 209 DDSSLCKGFAMCCVKGVRNN-VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 D S C + V+GV +P WM++RL VG+R IS VD+TNYV + G P H F Sbjct: 232 DGRSGCDRYVARVVRGVDTTATSPQWMQKRLTQVGMRPISLAVDVTNYVMMLLGQPLHAF 291 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDGRIQSIAGIIGGKHAGCD 325 D +S + RRA +GEK+ LD+ E L P++++I SD + +IAG++GG+ + Sbjct: 292 DLDTLSGSIGTRRARAGEKLTTLDDVERTLDPEDLLIVDGSDTPL-AIAGVMGGESSEVS 350 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D+TT+VL+E A +DP+ +ARS + + T++ RFERGVD + V L++ G Sbjct: 351 DSTTNVLIEAAHFDPVTVARSSRRHKLTTEASKRFERGVDPAVTAAAAQLAVDLLVEHGG 410 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEV 444 GTA + + F + R G+D ++ L L +G V E D V Sbjct: 411 GTADAGVTDIDNRIEREAFDFDVTLPTRYIGLDYSRDEVLSTLRAIGCEVDEREKDVVSV 470 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 + +WR D+ + +LVEE+ R+ G DQI S P P + R L+ Q R + LA Sbjct: 471 AAATWRPDLTDGPELVEEVARVRGYDQIPSVLPQPKSA---GRGLTHGQRVRRTIANTLA 527 Query: 504 SRAMMEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGR 558 + ++EV+ + FI + + G + + I+NP+S + MRTS+L LL A R Sbjct: 528 HQGLVEVLTYPFIGEGRFDQLGYATDDFRRSTVRIVNPLSDEAPLMRTSILDTLLDALRR 587 Query: 559 NVDRAIADFAIFEVSHVY-----------------ENDTPEGQKYMAAGIRKGSSGIEGS 601 NV R D A++EV V +D GQ A + + Sbjct: 588 NVSRGARDVAVYEVGLVTVGSSSPTSAPVPPADARPDDATLGQILGAVPAQPRHVAFAAA 647 Query: 602 GRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSA 660 G + R D D AL+V + L + AP +HPGR I S Sbjct: 648 GDIERGGPWGPSRRADASDPVGWALAVGRAIGLELSVVSARDRAP--FHPGRCAAITLSD 705 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 +G+ GE HP ++ L G E+ +D + + + LS+ D+ Sbjct: 706 GTAVGHVGELHPKVVAALDLPVGTVGGELDVDVLVAGSGSAVQAHQ---LSTFPAAHTDV 762 Query: 721 AFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A +VD+ + A + ++ ++ V++FD+++G L G+KS+A ++ + + T + Sbjct: 763 ALVVDEPVAAAEVEAALRAGAGESLESVSLFDIYRGDQLEAGRKSLAYRLTFRGDR-TLK 821 Query: 780 DDDIRILMD 788 D++ L D Sbjct: 822 TDEVSALRD 830 >gi|119356753|ref|YP_911397.1| phenylalanyl-tRNA synthetase subunit beta [Chlorobium phaeobacteroides DSM 266] gi|119354102|gb|ABL64973.1| phenylalanyl-tRNA synthetase beta subunit [Chlorobium phaeobacteroides DSM 266] Length = 803 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 235/840 (27%), Positives = 406/840 (48%), Gaps = 76/840 (9%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +++WLKD L + + + LT +GLEVE VD + +V ++ V +PD Sbjct: 1 MKISVNWLKDFLPAFSPDIATLVEHLTFLGLEVENVDELSSHDDRVVVGRIEDVRAHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP---ENNMIVNVRKIRGIES 114 + I +D G+ + +Q+VCGAPNVR G++ A G+ + + + K+RG ES Sbjct: 61 ERLTICMVDVGQPEPLQIVCGAPNVRKGMVVPVATIGAVLKLEGGEKLTIKKSKLRGQES 120 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM+C+ EL LS D + +MEL + G L++Y+ +D I+D+++TPNR D + GI Sbjct: 121 FGMICAADELGLSHDHSGVMELDLSCMPGEALNNYVH-ADAILDIAVTPNRPDVLSHLGI 179 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A +L + +S P S E ++ D S C ++ ++GV +P Sbjct: 180 ARELAG-------DTPVSYPAFSPVAFAESGTFVEVLDRSACPFYSAIVIRGVTVAPSPG 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++Q+L+++GLR + +VDITNY+ G P H FD +++ + R+ ++L+ Sbjct: 233 WLQQKLQSIGLRPKNNIVDITNYILHSIGQPLHAFDLNQLEGGKVIVRSDMSGSFISLNQ 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + + P VI + ++AG++GG ++ ++TTD+L+E A + P I +S + GI Sbjct: 293 ESCSIEPGMTVICDSMKPVALAGVMGGLNSAVSESTTDILLESAYFAPSLIRKSARKSGI 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKIVFMNSE 410 +DS YRFERGVD + + +LIL L GG A++ C A ++ RK+ Sbjct: 353 ASDSSYRFERGVDPLNVQRAAEAAAALILDLAGGCIAAAEQCGAP--PFEKRKVRLRPDR 410 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V L G ++ IL RLGF D + SVPS+R DV+++ DLVEEI R+YG Sbjct: 411 VNALLGTELDSATMTGILARLGFEEESACDNELLFSVPSFRVDVDDEIDLVEEIARVYGY 470 Query: 470 DQIK-SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D I+ SE + T + ++ Y++ V+ E++ I +E + LF Sbjct: 471 DNIRPSEQMVTTYPQSRKTPGYFPD---YLRSVVTGLNFREILTNPLIKREDAELFDSAL 527 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----- 583 + LNPIS + +R +L+P LK N+ D +FEV+ + + +G Sbjct: 528 --VAALNPISEGLEVLRPTLVPAFLKVIAHNIRHGSRDLRLFEVARGFRKSSLDGDSATS 585 Query: 584 -------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 ++Y+ + R W+ S D++D ++E LD Sbjct: 586 PLDGYLEREYLVMAVTGNR-----YPRAWNQPSGSS----DVYDLTGAVEMLLEKLNLLD 636 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGE-----------FHPNILDFFGLSNPIC 685 ++Y+ GI E++L G+ P +L F ++ Sbjct: 637 KSEL-----NFYNDRTVGI-----ELMLTREGKTRNCPAGVVQIMDPGLLKHFAITQ--- 683 Query: 686 GFEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL 743 +V++ I + + V++ S V+RDL+F++ + + +LV +++ D Sbjct: 684 --DVFIAEIDSAVLEACFNPDVIYEPPSKFPVVQRDLSFVLPRSVTVQSLVRLVRTSDPY 741 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I V+VFD+F+ + G++ VA+ + I T D+ I ++ + + K AV+R Sbjct: 742 IRSVSVFDLFEAREEDGGERRVALSMEIADYNGTLHDERINEILLHVGSSAESKLGAVIR 801 >gi|327329572|gb|EGE71331.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL096PA3] Length = 839 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 244/866 (28%), Positives = 395/866 (45%), Gaps = 89/866 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 T + + + PR+ + ++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTINVDLP-NRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVA 468 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 469 PTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEAG 525 Query: 507 MMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 526 FVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMS 585 Query: 562 RAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS-- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 586 RSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWL 645 Query: 602 GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 646 PDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIVD 697 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K D Sbjct: 698 GK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKED 753 Query: 720 LAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +VD+ + A + +I+ L++ V +FDV++G+ + + +KS+A + ++ T Sbjct: 754 VALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVSDNRKSLAFNLRLRGADRTL 813 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 814 TDSEALETRDAAVARAEETCGAQLRS 839 >gi|313619322|gb|EFR91056.1| phenylalanyl-tRNA synthetase, beta subunit [Listeria innocua FSL S4-378] Length = 802 Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 225/826 (27%), Positives = 414/826 (50%), Gaps = 47/826 (5%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEEEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+CS EL + I LP G L L D I+D+++TPNR+D Sbjct: 117 EGMICSLAELGFESKVVPKAYADGIYVLPEHVETGVSAITLLGLDDAILDMAITPNRADA 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVR 226 + + G+A ++ A + K + P SE + I ++++ + +A+ V+ + Sbjct: 177 LSMNGVAHEVGA--IIHQKPAQPTEPDVSEKGKADDFISVEVENPTETPYYAIKMVENIE 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E Sbjct: 235 IKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKDQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +I LD ++ L + VI + +IAG++GG+ + + TT V +E A++ ++ + Sbjct: 295 EITTLDGEKRTLQTGHTVITNGTEPIAIAGVMGGEFSEVTETTTTVALEGAIFSSSSVGK 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKI 404 + + L + T++ R+++G D + L H +LI L GGT + N KI Sbjct: 355 ASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAELSGGTLVGGVVEVDNRAKAVNKI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + + R+ G ++ + + I +RLGF + + D + VP+ R D+ +AD++EE+ Sbjct: 415 ETSLTRINRILGTEISLSEIETIFDRLGFVLEVKEDTLIIEVPTRRWDITIEADILEEVA 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D+I P+ L LS Q R ++ L + + + +S SK+ + Sbjct: 475 RIYGYDEI---PVTLPATSTTGGLSDSQKARRVMRAYLEGAGLNQALTYSLTSKKDATRL 531 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---ENDT 580 ++ + + P+S + S++RTS++P L+++ N+ R D A++E+ V+ E D Sbjct: 532 ALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASYNIARKNMDVALYEMGTVFYATEGDN 591 Query: 581 -PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P Q+++A I +G + ++ + VD F K ++ L Sbjct: 592 LPIEQEHLAGLI---------TGNWHTADWQKTPKPVDFFVLKGIVEGLVNKLGIEAELH 642 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ HPGR+ I + + GY G HP + + L FE+ + ++ + K Sbjct: 643 WKQIEKEELHPGRTASIHLEGKEI-GYLGALHPAVEASYDLKETYV-FEINVKALLDAMK 700 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKS 757 ++ V H +P + RDLA +VD+ T+ +IK + L+ D+ +FD+F+G+S Sbjct: 701 EKV----VYHPIPRYPEMTRDLALLVDKDTDHATISQVIKEHGGNLLVDIELFDIFEGES 756 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LGE KKS+A + + T ++D++ +++VE + K +A++R Sbjct: 757 LGENKKSLAYTLTFLDSERTLVEEDVQKATNKVVEALQAKLHAIIR 802 >gi|318041409|ref|ZP_07973365.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. CB0101] Length = 820 Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 224/842 (26%), Positives = 422/842 (50%), Gaps = 60/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +L WL++ + + ++++ + L+ G EVE++++ A + +V V S E++P+ D Sbjct: 1 MRVSLQWLQELVACTLPVDELAERLSVAGFEVEEIEDLAARAAGVVVGHVNSREQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ + G + +Q+VCGA NVR G+ A GS +P ++ + ++RG+ S+GM+ Sbjct: 61 KLSVCTVAIGAAEPLQIVCGAKNVRAGIHVAVATVGSYLPAVDLTIKPAELRGVASSGMI 120 Query: 119 CSEKELMLSD--DSASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL L+D D I++ +D+ +G + L D ++++++T NR D + ++GI Sbjct: 121 CSLSELGLADSSDGIVILDEALDSVPALGTPVGPLFGLDDQVLELAITANRPDGLSMQGI 180 Query: 175 ALDLVA--AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 A ++ A L + P+ + ++ ++ L F++ + ++ +P Sbjct: 181 AREVAALSGAALSLPAAAPAIPMQPLPVSASVQERIEAGGL---FSLTALNNLQVGPSPQ 237 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRACS 283 W++ RL+ GLR I+ +VDITN V L+ G P H FDA++++ + L +R + Sbjct: 238 WLQSRLERAGLRPINNVVDITNLVMLEFGQPLHAFDAAKLAGLSGGSADPARLDLRSGRT 297 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE ALD E+ LS + V++ + ++AG+IGG ++ D +TT + +E A++ P + Sbjct: 298 GEAFKALDVSEHSLSEEAWVVSYADQAVALAGVIGGDNSCVDASTTSIWLEAAMFAPQTV 357 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 RS +++G+ TD+ RFE+G+ + + V L+ LC + PR Sbjct: 358 RRSSRSVGLRTDASSRFEKGLPREVTLSAADRAVQLLQELCCAQVEGRW-GHERSEAPRP 416 Query: 404 IVFMNSE--------VKRLSG--IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QD 452 + + S+ V SG D+P + +IL LG + + + ++V VP R D Sbjct: 417 ALQLRSDALHNLLGPVVDASGEEADLPDAEIEQILTALGCQLSADDEGWQVQVPPSRAMD 476 Query: 453 VEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 ++ + DL+EE+ R+ G D+ S P P+ + LS Q R ++R+L + E Sbjct: 477 LQREVDLIEEVARLVGYDRFASHLPDPI----EPGGLSDVQQAERRLRRMLVDAGLQETC 532 Query: 512 NWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + S E +R + + NP+ AD S++R SL+ LL+A RN+ + F FE Sbjct: 533 SLSLGPAESERPGADPKRRVALANPLLADYSHLRDSLVDELLQAAQRNLQAGRSGFWAFE 592 Query: 572 VSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 + +V++ + GQ AG+ G+ E LWS S + + +D F A+ V++ Sbjct: 593 LGNVFDATAADGGQTLQLAGVICGARQAE----LWS--SSGKPQALDYFQARG----VLQ 642 Query: 631 PFVSLDSLRFE------SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +LDSL+ S P HPGR+ + G+FG+ HP + + + L Sbjct: 643 Q--ALDSLKLPVEDRRLSDEP-LLHPGRAAQLAVEGRPG-GWFGQVHPELAERYDLPAAT 698 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKNVDR- 742 F++ + + + +R + + + P +RDLA +V +G L+ I+ + Sbjct: 699 YLFQLDVAQLLSAATRRNRWQPAFAAYATVPASERDLALVVPATTASGQLLQAIRKAGKP 758 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L++ + D ++G+ + G+ S A ++ + K T D ++ ++I + K+ A L Sbjct: 759 LLEQAELVDRYEGEQVAAGRCSQAFRLRYRDAKRTLTDTEVDGAHEKIRAALEKQFGAQL 818 Query: 803 RS 804 R+ Sbjct: 819 RA 820 >gi|307298723|ref|ZP_07578526.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] gi|306915888|gb|EFN46272.1| phenylalanyl-tRNA synthetase, beta subunit [Thermotogales bacterium mesG1.Ag.4.2] Length = 789 Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 254/828 (30%), Positives = 412/828 (49%), Gaps = 72/828 (8%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK L W+ + +D +D S +++ ++L+ G EV ++ + +V K+ S +P Sbjct: 1 MKLYLEWINEFVDISDKSPQELSNSLSLSGTEVAGIEYPWSYVQGAVVGKIKSARPHPMS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + R+D G +E+ +V V+ G P GS + + + ++ G+ S GM Sbjct: 61 DRLLVTRVDAG-VRELTIVTADLTVKEGETVGVLPEGSAL--SGTKIENKEFLGVLSEGM 117 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 S +EL L + S +IM L P G + + L L I+V LT NR DC+ V G+A + Sbjct: 118 FLSLEELELEEKSQTIMRLEQGKP-GESVIELLGLDSAAIEVELTANRGDCLSVVGMARE 176 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE----IKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 L G + E + P + +SIP+ +K L D C + + V +P W Sbjct: 177 L-----GAIYERKVERPCADDSIPVGDDGLLKVTLKDEG-CTRYTALLMSDVTICGSPLW 230 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 M++RL A GLR I+ +VDITNY+ L+ G+P H FD RI S + VR A +GEK+ LD Sbjct: 231 MKRRLVAAGLRPINNVVDITNYMMLETGHPIHAFDVDRIGSTEIVVRSARNGEKLELLDG 290 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + L ++++I + ++AG++GG+ +G +T VL+EVA++DP+ I ++ + LGI Sbjct: 291 KVVQLDSNDMLITNGETPLALAGVMGGEDSGIYSSTRKVLLEVAVFDPVRIRKTSRKLGI 350 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-- 410 TDS YRFERG+D + I V++ + L+ L G + + + T P K + + E Sbjct: 351 STDSSYRFERGIDYEDSIYVIRRLADLMERLSGASVASKIVDAGGT-APVKAIDLREEFV 409 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGV 469 RL G+ VP E ILE LGF ++V+ P++R D ++ DLVEEI RIYG Sbjct: 410 ADRLGGV-VPSEKIGAILESLGFKTERTDFGWKVTPPAFRSYDTRQEIDLVEEIGRIYGY 468 Query: 470 DQIKS---EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 D+I++ LP++ + R + VK ++ + E+V +SFI+ ++ G Sbjct: 469 DKIENVLPRVLPISG-----GVPEFLKRQKRVKDLMVANGFDEIVTYSFINPDEFDKLGT 523 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + +LNP+S DM+ MR SL+ LL A N R D +FE++ V+ PE ++ Sbjct: 524 DPKHVALLNPLSMDMAVMRPSLVYNLLSAASYNYRRQNRDIKLFEIASVF---NPEREQS 580 Query: 587 MAAGIRKGSSGIEGSGRL----WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--F 640 + G +GR +SDK R +D F K VI+ SL L + Sbjct: 581 ETTAL-----GFVATGRENPLDYSDK-----RILDFFTFKG----VIDELCSLYGLDPVY 626 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--- 697 SW G++ + + G+FG + D I EVY+ + IS Sbjct: 627 NPLTISWLEKGKAVSVDVDGRKI-GFFGAVDISAADAL---YEIKSGEVYVAELNISTIE 682 Query: 698 --QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVF 753 K + KK+ S V RDL+F+V I G L +I+ +++ V D++ Sbjct: 683 SLMKGFSGAKKI---SPFPRVFRDLSFLVPGSIAYGELEELIRRTLDGTSFEEIRVSDLY 739 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +GK + G KS+ + + + T DD+I L +E V++KT + Sbjct: 740 RGKGIEPGYKSITVTLGFESFDKTLTDDEINTL----IELVLRKTEKI 783 >gi|256825070|ref|YP_003149030.1| phenylalanyl-tRNA synthetase subunit beta [Kytococcus sedentarius DSM 20547] gi|256688463|gb|ACV06265.1| phenylalanyl-tRNA synthetase beta subunit [Kytococcus sedentarius DSM 20547] Length = 844 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 249/875 (28%), Positives = 394/875 (45%), Gaps = 102/875 (11%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M ++WL ++ L V+ E++ L +G E E + + P + KVLS E P Sbjct: 1 MHIPINWLGEYVELPQGVTGEQVAADLVRLGFEEESLGAQMITGPLVVGKVLSREPEPQK 60 Query: 59 DCAIL---RIDTGKHQ---EIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + ++ ++D G+ E Q ++CGA N V L V + PG+ + ++ RK G Sbjct: 61 NGKVINWCQVDVGQANGTGEPQGIICGAHNFDVDDLVVVSLPGAVL-SGGFEISERKTYG 119 Query: 112 IESTGMMCSEKELMLSDDSASIM----ELPIDAPV---GGRLSDYLELSDPIIDVSLTPN 164 S GM+CS EL L DD I+ L DA G L L I+V++TP+ Sbjct: 120 HLSAGMICSAAELGLGDDHDGIIVLTEYLGEDASSLQPGQDALPLLGLDSQTIEVNVTPD 179 Query: 165 RSDCIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMC- 220 R + +RG+A + A + + + + P S + +P+ + DS +G C Sbjct: 180 RGYAMSMRGLAREYSHATGSRFTDPAALAVDTP-SGDGVPVSVT----DSGPIRGVPGCD 234 Query: 221 -----CVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD 274 V+G+ R+ P WM +RL G+R + +VD+TNYV L G P H FD + D Sbjct: 235 RYVARVVRGIDRSRPTPRWMAKRLTDAGMRPLGLIVDVTNYVMLALGQPLHAFDLGAVRD 294 Query: 275 VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 + VRRA +GEK+ LD +E L P+++VI S G ++AG++GG + D TTD+L+E Sbjct: 295 GIEVRRAAAGEKLTTLDGKERSLDPEDLVITSGGGPVALAGVMGGADSEIGDETTDLLLE 354 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA 394 A +D ++IAR+ + +++++ R+ER VD Q + V L++ GG A Sbjct: 355 SAHFDAVSIARTARRHRLVSEASKRYERRVDPQLAPSAAQLAVDLLVEHGGGVAETAFTD 414 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF---------SVIGEYDKFEVS 445 + T P I F + L G++ D +++RL + G + V+ Sbjct: 415 LDHTTSPEPIRFDTAHPTALVGVEY---DRATVIDRLAMIGCRVEADGAADGGHGTVLVT 471 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 PSWR D+ DLVEE+ R+ G D+I P L Q L+L Q R R +LA Sbjct: 472 PPSWRPDLTIPVDLVEEVARLSGYDEI---PSVLPQAPGGGGLTLSQRRRRIAADLLADA 528 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNV 560 + +VV S Q G + + L + NP+SA+ +RTSLL L+ A RN+ Sbjct: 529 GLHQVVTLPMTSAAQWDRLGYPEDDPRRNALRLHNPLSAEEPFLRTSLLQTLVPAARRNL 588 Query: 561 DRAIADFAIFEVSHV------------------------YENDTPEGQKYMAAGIRKGS- 595 R A++E+ V D Q + AAGI G Sbjct: 589 ARGQRGAAVYELGRVVLPSGDVVAPVQDVGLEPSAEMLQALADAVPHQPFHAAGIIAGEW 648 Query: 596 --SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G G R WSD E F + V+L+ + AP +HPG Sbjct: 649 ERQGWWGPARAAEWSDAVELVLGLAGRFGVE----------VTLEQAQH---AP--FHPG 693 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R + + G+ GE HP L L GFEV +D++ I T + Sbjct: 694 RCARLVLADGTTWGHAGELHPQRLAELELPERTVGFEVDVDAL-IEASPEVSTHRDF--- 749 Query: 712 SLHPVKR-DLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 S P R D+A + D +PA + ++ L++ V +FD + G+ +G G++S A ++ Sbjct: 750 SDQPFSRVDVALLTDLSVPASDIGAALREGAGELLESVEMFDQYTGEQVGPGRRSTAWRL 809 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T +++ D + V ++T A R Sbjct: 810 TFRATDRTLTNEETNAARDAAIALVTERTGAQHRG 844 >gi|187736478|ref|YP_001878590.1| phenylalanyl-tRNA synthetase, beta subunit [Akkermansia muciniphila ATCC BAA-835] gi|187426530|gb|ACD05809.1| phenylalanyl-tRNA synthetase, beta subunit [Akkermansia muciniphila ATCC BAA-835] Length = 839 Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 248/870 (28%), Positives = 403/870 (46%), Gaps = 103/870 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL 58 MK +L+WL ++D + +S++++ D LT G+EVE + + SP+ +V +V S E++P Sbjct: 1 MKISLNWLSQYIDLSGLSVDEMSDMLTFAGIEVEDIRQQGVDSPYVVVARVASAEQHPQA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G Q+VCGA N +VG A PG+ +P N+ + V K+RG+ES GM Sbjct: 61 DRLKVCQVDVGDGTLHQIVCGAQNYKVGDKVPCALPGAVLP-GNVEIKVGKLRGVESRGM 119 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL L D + LP + G +S ++ +D +++V +TPNR D + G+A + Sbjct: 120 LCSASELGLPDKEHGLWILPQELEPGTPISQVVK-ADTLVEVEVTPNRPDLLSHNGMAYE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFD---LDDSSLCKGFAMCCVKGVRNNVAPNWM 234 L A + ++I + LE D LD L + + GV+ +P W+ Sbjct: 179 LAAISGRGYRPVSID----DAGVALEPAGDFVRLDQPELNPYYTAVKISGVKVQESPEWL 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 ++RL AVGLR I+ +VDITN+V + G P H FDA+++ + R A GE I ALD QE Sbjct: 235 KERLVAVGLRPINNIVDITNFVLHELGTPLHAFDAAKVQGGIVTRTAYEGETIKALDGQE 294 Query: 295 YDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L+ ++V+A G+ +I G++GG+ +G D TTD+++E A + P ++ + + L + Sbjct: 295 YTLNCTDLVVADQSGKALAIGGVMGGEESGVTDATTDIILESAWFKPSSVRATSRRLALS 354 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI--------- 404 +DS YRFERG ++ V LIL L GGTAS +A + P Sbjct: 355 SDSSYRFERGTSAWNVLRGSVRAVELILQLAGGTASPTYVAGSPVPNPAHASMPSCGGAD 414 Query: 405 ----VFMN--------------------SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 VF + + ++SG + E+ RIL LG + + Sbjct: 415 GPVSVFASLKQGKGATVTNELGFVQLPWKALDQISGGSISHEEGTRILTALGLKQVPDSP 474 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE---PL-PLTQVEDKRNLSLQQSRTR 496 + + +P R D+ DL+EEI+R++G+D I S P + V+ N ++ Sbjct: 475 ECWL-IPPHRLDLTRPCDLLEEIVRVFGLDGIPSRFSGPFVAESPVDVAYNFQME----- 528 Query: 497 YVKRVLASRAMMEVVNWSFISKEQS------VLFGGGQRELE------ILNPISADMSNM 544 ++R LA+ E I+ E + V R L+ + P+S D S + Sbjct: 529 -LRRKLAALGFYETQTIKLIASESADGTIAQVKDALPLRPLQDGDLIRVSLPLSEDHSVL 587 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG-- 602 R + PGL+ A RN ++ ++ FE+ V+ N T G+ I + GI SG Sbjct: 588 RPAHTPGLIAAAVRNSNQGVSGLRFFELGRVFRN-TGGGK---GRDIETDTLGILVSGDR 643 Query: 603 --RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 R W+D E+ F DL A AL+ F + E A A Sbjct: 644 TARSWADPRPEQASFEDLLAVMA-ALAPGHRFTLTPARPREQAA-------------LGA 689 Query: 661 EIVL-----GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ L GYF GL P+ E+ L + Q+ T K L Sbjct: 690 DVQLDGKACGYFARLSLARCRELGLGQPVYVAELDLRKM---QEILTAPVKAAELPQFPG 746 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVF---QGKSLGEGKKSVAIQVLI 771 RD A + P +V +++ ++L+ FDVF G+ L +KS+A L Sbjct: 747 SSRDAAMELPLSTPNADIVKAVESAREKLLVSYFCFDVFTDPSGEKLPADRKSIAYTFLY 806 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + T ++ R+++ + K + Sbjct: 807 RDPAKTLTAAEVDAAHQRVLKALTDKVKGL 836 >gi|309805171|ref|ZP_07699223.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] gi|308165405|gb|EFO67636.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 09V1-c] Length = 804 Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 227/825 (27%), Positives = 409/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGKDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKVAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLEDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 Q+ ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNQKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDNNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG ++ D + + +D + K ++ IE + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYDDNWQHLDQNIDFYYVKGQLTNIFIELGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|282882271|ref|ZP_06290905.1| phenylalanyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] gi|281297892|gb|EFA90354.1| phenylalanyl-tRNA synthetase, beta subunit [Peptoniphilus lacrimalis 315-B] Length = 793 Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 236/836 (28%), Positives = 404/836 (48%), Gaps = 75/836 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + WLKD++D D ++ + D L+ G VE + R E + K++ ++++PD D Sbjct: 1 MYVPIKWLKDYIDLDEDIKTLADKLSDSGSHVESIITRSEGIEGVYTGKIIEIKKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D K +++Q+V GA NV G + A G+ + N + + +RG+ES GMM Sbjct: 61 KLVVCKVDF-KDKDLQIVTGAKNVFEGAIVPVALDGAKL-HNGIEIKSGLLRGVESQGMM 118 Query: 119 CSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL + + I P + VG + + L+L++PII+ +TPNR DC+ + Sbjct: 119 CSLEELGYDVSVIPKEARNGIFIFPKNTEVGADVIELLDLNEPIIEFEITPNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+AL+ A K+K ++ + +I ++ D+ C + + ++ +P Sbjct: 179 GMALETAATLDKKIKRPSVEVKNAKGNIKDFLEDIQIDTPNCYRYYSRVLSDIKIEPSPL 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 WM+ L A G+R IS +VD+TN++ L+ G P H FD + + + VR A GEK LD Sbjct: 239 WMQDYLMAAGVRPISNIVDLTNFIMLELGTPMHAFDLDSLKNKKVVVREAIDGEKFKTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E DL +++I I + GI+GG + ++NT +VL+E A ++ NI ++ K L Sbjct: 299 GKERDLKSGDILITDGEEIIGLGGIMGGLDSEINENTKNVLIEGACFNEDNIRKTSKRLN 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 + +++ RFE+G+D + + L +L G D I K++ ++ E Sbjct: 359 LRSEASGRFEKGLDPNLCEISVNRMCHLAQALNIGNVIDGHIDVYKNKVEEKVIELSKEK 418 Query: 412 KR-LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L GI++ E+ IL+RL D VP++R+D+ DL+EE+ RIYG Sbjct: 419 NNNLMGIELSTEEIASILQRLEIKCQINGDIISAKVPTFRRDINIAEDLIEEVARIYGYA 478 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRY------VKRVLASRAMMEVVNWSFIS------- 517 I+ +PL + LS+ SR Y +K L E + +SF+S Sbjct: 479 NIEKKPL-------RGELSVG-SRPHYREIEIRIKNFLTGLGYNEFMTYSFVSPTIFDKL 530 Query: 518 ---KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 K+ + + L ILNP+ D S MR SL+P ++ A +N R + A FE+ + Sbjct: 531 NIDKDDPI-----RDTLNILNPLGEDYSIMRPSLIPSMIDALSKNAARFNENVAGFEIGN 585 Query: 575 VY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL--FDAKADALSVI 629 + + + PE + + G F D+ F +++ I Sbjct: 586 TFFKSQKELPEEKLKLVMG------------------------FYDIGDFYYLKESIEKI 621 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 V L ++ S+ H GR I LG GE HP +L + + + E+ Sbjct: 622 LWNVGLSGFTYKRIKKSYLHTGRCAEIFYKGH-SLGILGEVHPLVLKNYSMKKKVYVAEL 680 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVT 748 D I + K++ S +KRD AF++D+ I A + I K N L++ Sbjct: 681 DFDFITENSINNYTFKELFKYPS---IKRDFAFVMDRDIEASQIEKIAKDNGKDLLESFK 737 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VFD+++G ++ +GKKS+A ++ + T DDDI + + +V+++ K+ AVLRS Sbjct: 738 VFDIYEGDNIEKGKKSLAFSLVFRSKDRTLTDDDISTISENVVKSIEKQLGAVLRS 793 >gi|289426527|ref|ZP_06428270.1| phenylalanine--tRNA ligase, beta subunit [Propionibacterium acnes SK187] gi|289153255|gb|EFD01973.1| phenylalanine--tRNA ligase, beta subunit [Propionibacterium acnes SK187] Length = 839 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 244/867 (28%), Positives = 396/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +D Sbjct: 235 ACSQFIALPVSGMNLGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDVDN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G VP E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEE R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEETGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALETRDAAVARAEETCGAQLRS 839 >gi|260587880|ref|ZP_05853793.1| phenylalanyl-tRNA synthetase, beta subunit [Blautia hansenii DSM 20583] gi|260542145|gb|EEX22714.1| phenylalanyl-tRNA synthetase, beta subunit [Blautia hansenii DSM 20583] Length = 796 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 240/824 (29%), Positives = 389/824 (47%), Gaps = 73/824 (8%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DVS ++ D +T G +VE + +A L I ++ +ER+PD Sbjct: 1 MNTSLSWIKKYVPDLDVSAQEYTDAMTLSGTKVEGFEKLDADLEKIVIGQIEKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I+ +++ G + +Q+V GA NV G G + + I K+RG+ES GM Sbjct: 61 DKLIVCQVNIGT-ETVQIVTGASNVHEGDKIPVVLDGGSVADGTKI-KTGKLRGVESCGM 118 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 MCS +EL + + I P DA VG + L +D + + +T NR DC V Sbjct: 119 MCSIEELGSTTEFYPEAAEDGIYIFPEDAEVGASAIEALGFNDVVFEYEITSNRVDCYSV 178 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA + A + +SE + +K ++D LC + VK V+ +P Sbjct: 179 IGIAREAAATFQKPFYPPVVEVKGNSEDVNDYVKVTVEDKELCPRYCARMVKNVKIGPSP 238 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILAL 290 WM++ L A G+R I+ LVDITNYV + G P H +D I + VRRA EK + L Sbjct: 239 KWMQRCLAANGIRPINNLVDITNYVMEEFGQPMHAYDMDTIEGQEIIVRRAKKDEKFVTL 298 Query: 291 DNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D QE L D+V++ DG+ IAGI+GG+++ +N T VL+E A +D +NI S K Sbjct: 299 DGQERVLD-DSVLMICDGKKPVGIAGIMGGENSMITENATTVLLEAACFDGVNIRLSSKK 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMN 408 +G+ TD+ +FE+G+D + LI CG + + +P ++ F Sbjct: 358 VGLRTDASGKFEKGLDPNNAQAAIDRACQLIEEFGCGEVVGGMADVYSKVKEPVRVAFDA 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKADLVEEILRI 466 ++ L G ++ E+ L L R+ +YD+ E+ P++R D+ ADL EE+ R Sbjct: 418 DKINSLLGTELSKEEMLEYLSRVEL----KYDESTGEIVAPTFRHDIFRMADLAEEVARF 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS-RAMMEVVNWSFISKE--QSVL 523 YG D I P L + E + R V R +A + +SF S + +L Sbjct: 474 YGYDNI---PTTLPKGEATTGKLPFKLRIEQVARDMAEFNGFSQGYCYSFESPKVFDKLL 530 Query: 524 FGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--- 577 ++ + I NP+ D S MRT L G+L + G N R D ++E+ ++Y Sbjct: 531 IPENDELRKAIVISNPLGEDFSIMRTISLNGMLTSLGTNYKRRNKDVRLYELGNIYLPKE 590 Query: 578 ---NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV- 633 + PE + G+ G+G +S K V+E F+ Sbjct: 591 LPLTELPEERMMFTLGMY-------GAGDFFSMKG------------------VVEEFLD 625 Query: 634 -----SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + +G P + HPGR I + V+GY GE HP + +G+ + Sbjct: 626 KIGMHKKEEYNPNAGKP-FLHPGRQAEI-IYDKTVIGYMGEVHPTVAASYGIGEK--AYV 681 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDV 747 LD IP + T +K ++ V RD++ +V + + AG + +I + +++++ Sbjct: 682 AVLD-IPAILEFATFDRKYEGIAKFPAVSRDISMVVPKEVLAGQIEAVIAQRGGKILENY 740 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +FD+++G + EG KS+A V + T D D+ M +I+ Sbjct: 741 QLFDIYEGSQIKEGYKSMAYSVTFRAKDRTLEDADVNAAMKKIL 784 >gi|226323650|ref|ZP_03799168.1| hypothetical protein COPCOM_01425 [Coprococcus comes ATCC 27758] gi|225207834|gb|EEG90188.1| hypothetical protein COPCOM_01425 [Coprococcus comes ATCC 27758] Length = 806 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 233/838 (27%), Positives = 400/838 (47%), Gaps = 89/838 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ + DV+ ++ D +T G +VE +A L + ++ +E++PD Sbjct: 1 MDTSLSWIKAYVPELDVTAQEYTDAMTLSGTKVEGFTKLDADLDKIVVGQIEKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG----------LLGVWAPPGSCIPENNMIVNVR 107 D I+ +++ G + +Q+V GAPNV+ G + PG + E + + Sbjct: 61 DKLIICQVNVGT-EIVQIVTGAPNVKEGDKVPVVLDGGRVAGGHEPGQRV-EGGIKIKKG 118 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPI--------DAPVGGRLSDYLELSDPIIDV 159 K+RG++S GMMCS +EL D E P DA VG L L D + + Sbjct: 119 KLRGVDSYGMMCSIEEL--GSDRNMYPEAPEYGIYIFDDDAVVGESAVKALGLDDVVFEY 176 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 +T NR DC V GIA ++ A + K ++ + E + IK ++++ LC + Sbjct: 177 EITSNRVDCFSVIGIAREVAATFRKEFKPPVVTSTGNDEDVNDYIKVKVENTDLCPRYCA 236 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 VK ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I+ + V Sbjct: 237 RVVKNIKIGPSPKWMQRRLSSVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIAGHQIIV 296 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 R A GEK + LD QE ++ D+V++ DG + IAGI+GG+++ DN +L E A Sbjct: 297 RNAHKGEKFVTLDGQEREMD-DSVLMICDGEKAVGIAGIMGGENSMITDNVQTMLFEAAC 355 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARN 396 +D NI +S K +G+ TD+ +FE+G+D + LI + G + + Sbjct: 356 FDGTNIRKSSKKVGLRTDASGKFEKGLDPNNAEDAINRACQLIEEMGAGEVVGGMVDVYS 415 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVE 454 +P ++ F ++ L G ++P ED ++ E++ EYD EV P++R D+ Sbjct: 416 KKKEPVRVPFDADKINALLGTNIPEEDMIKYFEKIDL----EYDAEAKEVIAPTFRHDLF 471 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 ADL EE+ R YG D I + LP + + LS + + + + + +S Sbjct: 472 RIADLAEEVARFYGYDNIPT-TLPTGEATTGK-LSFKLRVEEVARNIAEFCGFSQGMTYS 529 Query: 515 FISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F S + +L ++ ++I+NP+ D S MRT+ L G+L + N +R + + Sbjct: 530 FESPKVFDKLLLDKDDPMRQAIQIMNPLGEDYSVMRTTSLNGMLTSLATNYNRRNKNVRL 589 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFDAK 622 +E+ ++Y P+ ++ +ER +F D F K Sbjct: 590 YELGNIY---LPKALP-------------------LTELPDERMQFTLGMYGDGDFFSMK 627 Query: 623 ADALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 V+E F L + + ++ HPGR I ++V GY GE HP + D Sbjct: 628 G----VVEEFFEKVGLHKKETYDPNAGKNFLHPGRQANIVYDGKVV-GYMGEVHPEVADI 682 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKT--KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 +G+ G Y+ I + Q T +K ++ V RD++ ++ + I G + Sbjct: 683 YGI-----GERAYVAVIDMPQITELATFERKYEGIAKYPAVSRDISMVMPKSILVGQVEE 737 Query: 736 IIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +I+N ++ +FD+++G + G KSVA + + T + DI M+RI++ Sbjct: 738 VIENKGGAYLESYKLFDIYEGAQIKAGFKSVAYSITFRAKDKTLEEADISAAMNRILK 795 >gi|239626735|ref|ZP_04669766.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239516881|gb|EEQ56747.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 810 Score = 290 bits (741), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 230/837 (27%), Positives = 392/837 (46%), Gaps = 79/837 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + L + +VLSVER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGYSCLDKNLENIVVGEVLSVERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP------------PGSCIPENNMIVN 105 D + +++ G +Q+V GAPN+ +G P G +PE+ + + Sbjct: 61 DKLVVCQVNVGADAPVQIVTGAPNITEASVGEKVPVVLDGGRVAGGHDGGALPEDGIKIK 120 Query: 106 VRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG+ES GMMCS +EL D + I LP D+ G + L D + + Sbjct: 121 KGKLRGVESCGMMCSIEELGADRDMYPDAPESGIYILPKDSVPGEDAVAVMGLRDVVFEY 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 +T NR DC V GIA + A +++ + E I +K +++S LC + Sbjct: 181 EITSNRVDCYSVIGIAREAAATFKKSFTAPSVAKTGNDEDINDYLKVCVENSQLCPRYCA 240 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTV 278 VK ++ +P WM++RL A G+R I+ +VDITNYV + G P H F+ +++ + V Sbjct: 241 RMVKNIKLAPSPQWMQRRLAASGIRPINNIVDITNYVMEEYGQPMHAFNYDQLAGHEIIV 300 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVAL 337 + A G+ LD QE L +++ +DG + IAGI+GG+++ D+ T ++ E A Sbjct: 301 KCAKDGDVFQTLDGQERKLD-STILMINDGEKEVGIAGIMGGENSKITDDVTTMVFESAC 359 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARN 396 ++ NI S K +G+ TD+ ++E+G+D + LI L G I Sbjct: 360 FNGTNIRLSAKKVGLRTDASGKYEKGLDPNTAEEAVNRACQLIEELGAGEVIGGIIDIYP 419 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILE--RLGFSVIGEYDKFEVSVPSWRQDVE 454 + + ++I F + + RL G D+P D L + LG+ D EV P+WRQD+E Sbjct: 420 VKKEEKRIPFDAARINRLLGTDIPEADMLEYFKMIELGYDA----DTKEVIAPTWRQDLE 475 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 AD+ EE+ R YG D+I + LP + + LS + + + + + +S Sbjct: 476 RMADVAEEVARFYGYDKIPTT-LPSGEATTGK-LSYKLRIEELAREIAEFCGFSQGMTYS 533 Query: 515 FISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F S + +L + + I NP+ D S MRT+ L G+L + N +R D + Sbjct: 534 FESPKVFDKMLIPADSPLRATVNISNPLGEDFSVMRTTSLNGMLTSLATNYNRRNKDVRL 593 Query: 570 FEVSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +E+++VY + P+ + G+ G G D F K Sbjct: 594 YELANVYRPIALPLTELPDERMQFTLGMY-------GDG--------------DFFTMKG 632 Query: 624 DALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 V+E F + + +G + HPGR I +V G+ GE HP++ D + Sbjct: 633 ----VVEEFFDKAGMHKKPHYNPNGEHPYLHPGRKADIVYDGTVV-GFLGEVHPDVADNY 687 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 + + V + +P T +K ++ V RD++ +V + I G + +II+ Sbjct: 688 KIGDRAY---VAVIDMPSIMDFTTFDRKYTGIAKFPAVTRDISMVVPKDILVGQIEDIIE 744 Query: 739 NV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 R ++ +FD+++G + G KSVA + + T D ++ +M++I+ + Sbjct: 745 QRGGRFLESYKLFDIYEGAQVLAGHKSVAYSITFRAKDHTLEDKEVSAVMNKILNGL 801 >gi|300813663|ref|ZP_07093985.1| phenylalanine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512205|gb|EFK39383.1| phenylalanine--tRNA ligase, beta subunit [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 793 Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 235/835 (28%), Positives = 402/835 (48%), Gaps = 73/835 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + WLKD++D D ++ + D L+ G VE + R E + K++ ++++PD D Sbjct: 1 MYVPIKWLKDYIDLDEDIKTLADKLSDSGSHVESIITRSEGIEGVYTGKIIEIKKHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ K +++Q+V GA NV G + A G+ + N + + +RG+ES GMMC Sbjct: 61 KLVVCKVNFKDKDLQIVTGAKNVFEGAIVPVALDGAKL-HNGIEIKSGLLRGVESQGMMC 119 Query: 120 SEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL + + I P + VG + + L+L++PII+ +TPNR DC+ + G Sbjct: 120 SLEELGYDVSVIPKEARNGIFIFPKNTEVGADVIELLDLNEPIIEFEITPNRPDCLSIIG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +AL+ A K+K ++ + +I ++ D+ C + + ++ +P W Sbjct: 180 MALETAATLDKKIKRPSVEVKNAKGNIKDFLEDIQIDTPNCYRYYSRVLSDIKIEPSPLW 239 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M+ L A G+R IS +VD+TN++ L+ G P H FD + + + VR A GEK LD Sbjct: 240 MQNYLMAAGVRPISNIVDLTNFIMLELGTPMHAFDLDSLKNKKVVVREARDGEKFKTLDG 299 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E DL +++I I + GI+GG + ++NT +VL+E A ++ NI ++ K L + Sbjct: 300 KERDLKSGDILITDGEEIIGLGGIMGGLDSEINENTKNVLIEGACFNEDNIRKTSKRLNL 359 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 +++ RFE+G+D + + L +L G D I K++ ++ E Sbjct: 360 RSEASGRFEKGLDPNLCEISVNRMCHLAQALNIGNVIDGHIDVYKNKVEEKVIELSKEKN 419 Query: 413 R-LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L GI++ E+ IL+RL D VP++R+D+ DL+EE+ RIYG Sbjct: 420 NNLMGIELSTEEIASILQRLEIKCQINGDIISAKVPTFRRDINIAEDLIEEVARIYGYAN 479 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRY------VKRVLASRAMMEVVNWSFIS-------- 517 I+ +PL + LS+ SR Y +K L E + +SF+S Sbjct: 480 IEKKPL-------RGELSVG-SRPHYREIEIRIKNFLTGLGYNEFMTYSFVSPTIFDKLN 531 Query: 518 --KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 K+ + + L ILNP+ D S MR SL+P ++ A +N R + A FE+ + Sbjct: 532 IDKDDPI-----RDTLNILNPLGEDYSIMRPSLIPSMIDALSKNAARFNENVAGFEIGNT 586 Query: 576 Y---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL--FDAKADALSVIE 630 + + + PE + + G F D+ F +++ I Sbjct: 587 FFKSQKELPEEKLKLVMG------------------------FYDIGDFYYLKESIEKIL 622 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 V L ++ S+ H GR I LG GE HP +L + + + E+ Sbjct: 623 WNVGLSGFTYKRIKKSYLHTGRCAEIFYKGH-SLGILGEVHPLVLKNYSMKKKVYVAELD 681 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTV 749 D I + K++ S +KRD AF++D+ I A + I K N L++ V Sbjct: 682 FDFITENSINNYTFKELFKYPS---IKRDFAFVMDRDIEASQIEKIAKDNGKDLLESFKV 738 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FD+++G ++ +GKKS+A ++ + T DDDI + + +V+++ K+ AVLRS Sbjct: 739 FDIYEGDNIEKGKKSLAFSLVFRSKDRTLTDDDISTISENVVKSIEKQLGAVLRS 793 >gi|170016718|ref|YP_001727637.1| phenylalanyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] gi|169803575|gb|ACA82193.1| Phenylalanyl-tRNA synthetase, beta subunit [Leuconostoc citreum KM20] Length = 819 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 233/845 (27%), Positives = 430/845 (50%), Gaps = 68/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEK-----ICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVER 54 MK +L WL ++L+ V++++ + + + +EV+ V + +V +V Sbjct: 1 MKTSLKWLNEYLEESVAVDEQSAADLAERIERTSVEVDSVTTLAGKQDGLVVAQVKTVAP 60 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM--IVNVRK--I 109 +PD D I ++D G+ + IQVV GAPNV G + A GS I ++N I+ +++ + Sbjct: 61 HPDSDHMVITQVDIGQDELIQVVTGAPNVAEGQYVILAQVGSHIIDHNTDDIIEIKQATL 120 Query: 110 RGIESTGMMCSEKELMLSDDSAS--------IMELPIDAPVGGRLSDYLELSDPIIDVSL 161 RG S GM+ + +E+ + A + + G L +++P+ID L Sbjct: 121 RGETSFGMLVALQEIGFDNKIAPKDFDAGIYVFGEEDNVHAGDDAIAILGMNEPVIDTDL 180 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS--ESIPL---EIKFDLDDSSLCKG 216 TPNRSD + + G A + G + I + P E PL +I+ ++ L Sbjct: 181 TPNRSDMLSMLGTAYEF-----GAMLGIKVVIPDFDLVEYEPLAADQIQISVESDELASK 235 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDV 275 +A+ + + +P W+++RL G+R I+ +VDITNY+ L G P H FD ++ + Sbjct: 236 YAVRVINNITVKDSPLWLQKRLWNAGMRPINNVVDITNYMMLVYGQPLHAFDLDKLTTKQ 295 Query: 276 LTVRRACSGEKILALDNQEYDL-SPDNVVIAS-DGRIQSIAGIIGGKHAGCDDNTTDVLV 333 L VRRA + E++ LD Q L + +++VIA+ D + +AG++GG + D +T ++++ Sbjct: 296 LAVRRAKNNEQLTTLDGQTRQLRAGEDIVIATNDAQPLMLAGVMGGMSSEVDRSTKNIVI 355 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDIC 392 E A+++P + + + I +++ RFERGV+ L H SL+ +L G A + Sbjct: 356 ESAVFNPSLVRATARRHNIHSEASSRFERGVNSDHTFIALDHAASLVDTLATGQVARGLL 415 Query: 393 IARNITYKPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW 449 A N +PR+ + V R++ G + + D IL+RL F K V +P+ Sbjct: 416 TAVN---QPREAIQQAITVNRVNHILGTTLTLADVTTILDRLAFEYTIVDSKINVVLPAR 472 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLT---QVEDKRNLSLQQSRTRYVKRVLASRA 506 R D+ +ADL+EEI R+YG D LP+T +L+ Q + R +++L S Sbjct: 473 RPDMSIEADLIEEIARLYGYDN-----LPVTLPYGPTTPGSLTKAQRQIRASRKILESLG 527 Query: 507 MMEVVNWSFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 M + ++++ + E++ F + + + P+S+D + +R +LL GLL+ NV+ ++ Sbjct: 528 MNQAISYALTTPEKAQQFAENPAAKVVTLDYPMSSDRTTVRQNLLAGLLEDVAYNVNHSV 587 Query: 565 ADFAIFEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 D A++E V+ +N+ P +++ AG+ G+ +E S W + ER VD +D Sbjct: 588 RDIALYEQGRVFVANGKNELPTEIEHL-AGVLTGNI-VESS---WQQEKAERV--VDFYD 640 Query: 621 AKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 K ++ +E + + ++R+ + + HPGR+ I T ++ LG+ G+ HP + Sbjct: 641 IKGIVVAYLEQ-IGVKNVRYVATDRHANMHPGRTADIYTD-DVYLGFVGQIHPKMTRAKK 698 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-K 738 ++ P+ GFE+ L ++ + K+ + V V RD+A +++ I ++ +I + Sbjct: 699 MT-PVYGFELNLFTVMSAAKETVSYQPVTRFPQ---VSRDVALLINDTITNEQVMTVIHQ 754 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + DVT+FDV+ G L GKKS+A Q+ Q + T + ++ + + + +V + Sbjct: 755 AAGSKLADVTLFDVYAGDKLPTGKKSLAYQLTYQNNEGTLVEAEVNDDFEVVTKALVAEL 814 Query: 799 NAVLR 803 A +R Sbjct: 815 GADIR 819 >gi|331083881|ref|ZP_08332990.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] gi|330403306|gb|EGG82866.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA] Length = 796 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 241/825 (29%), Positives = 390/825 (47%), Gaps = 75/825 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DVS ++ D +T G +VE + +A L I ++ +ER+PD Sbjct: 1 MNTSLSWIKKYVPDLDVSAQEYTDAMTLSGTKVEGFEELDADLEKIVIGQIEKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG-LLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D I+ +++ G + +Q+V GA NV G + V GS + K+RG+ES G Sbjct: 61 DKLIVCQVNIGT-ETVQIVTGASNVHEGDKIPVVLDGGSVA--GGTKIKTGKLRGVESCG 117 Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 MMCS +EL + + I P DA VG + L +D + + +T NR DC Sbjct: 118 MMCSIEELGSTTEFYPEAAEDGIYIFPEDAEVGASAIEALGFNDVVFEYEITSNRVDCYS 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 V GIA + A + +SE + +K ++D LC + VK V+ + Sbjct: 178 VIGIAREAAATFQKPFYPPVVEVKGNSEDVNDYVKVTVEDKELCPRYCARMVKNVKIGPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P WM++ L A G+R I+ LVDITNYV + G P H +D I + VRRA EK + Sbjct: 238 PKWMQRCLAANGIRPINNLVDITNYVMEEFGQPMHAYDMDTIEGQEIIVRRAKKDEKFVT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD QE L D+V++ DG+ IAGI+GG+++ +N T VL+E A +D +NI S K Sbjct: 298 LDGQERVLD-DSVLMICDGKKPVGIAGIMGGENSMITENATTVLLEAACFDGVNIRLSSK 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFM 407 +G+ TD+ +FE+G+D + LI CG + + +P ++ F Sbjct: 357 KVGLRTDASGKFEKGLDPNNAQAAIDRACQLIEEFGCGEVVGGMADVYSKVKEPVRVAFD 416 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKADLVEEILR 465 ++ L G ++ E+ L L R+ +YD+ E+ P++R D+ ADL EE+ R Sbjct: 417 ADKINSLLGTELSKEEMLEYLSRVEL----KYDESTGEIVAPTFRHDIFRMADLAEEVAR 472 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS-RAMMEVVNWSFISKE--QSV 522 YG D I P L + E + R V R +A + +SF S + + Sbjct: 473 FYGYDNI---PTTLPKGEATTGKLPFKLRIEQVARDMAEFNGFSQGYCYSFESPKVFDKL 529 Query: 523 LFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE-- 577 L ++ + I NP+ D S MRT L G+L + G N R D ++E+ ++Y Sbjct: 530 LIPENDELRKAIVISNPLGEDFSIMRTISLNGMLTSLGTNYKRRNKDVRLYELGNIYLPK 589 Query: 578 ----NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + PE + G+ G+G +S K V+E F+ Sbjct: 590 ELPLTELPEERMMFTLGMY-------GAGDFFSMKG------------------VVEEFL 624 Query: 634 ------SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + +G P + HPGR I + V+GY GE HP + +G+ + Sbjct: 625 DKIGMHKKEEYNPNAGKP-FLHPGRQAEI-IYDKTVIGYMGEVHPTVAASYGIGEK--AY 680 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDD 746 LD IP + T +K ++ V RD++ +V + + AG + +I + +++++ Sbjct: 681 VAVLD-IPAILEFATFDRKYEGIAKFPAVSRDISMVVPKEVLAGQIEAVIAQRGGKILEN 739 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +FD+++G + EG KS+A V + T D D+ M +I+ Sbjct: 740 YQLFDIYEGSQIKEGYKSMAYSVTFRAKDRTLEDADVNAAMKKIL 784 >gi|149919501|ref|ZP_01907981.1| phenylalanyl-tRNA synthetase, beta subunit [Plesiocystis pacifica SIR-1] gi|149819626|gb|EDM79053.1| phenylalanyl-tRNA synthetase, beta subunit [Plesiocystis pacifica SIR-1] Length = 851 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 216/690 (31%), Positives = 349/690 (50%), Gaps = 47/690 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQE 72 D VS E I DTLTS+GLEVE V + +L + ++ SVE++P+ D L + Sbjct: 28 DGKVSAEAIADTLTSLGLEVEGVTHY-SLDGVIVGELRSVEKHPNADKLNLVQLFDGSEL 86 Query: 73 IQVVCGAPNV-RVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 IQVVCGA N+ G +AP G+ +P + + RK+RG+ES GM+CSE E+ + D Sbjct: 87 IQVVCGASNLPEPGGKVAFAPVGTVLP-GDFSIGARKVRGVESFGMICSEVEMDIGADGE 145 Query: 132 SIMELPIDAPVGGRLSDYLE-LSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEIN 190 I+ LP D P G +LSD + + D +I++++TPNR D +G G+A+DL A Sbjct: 146 GILVLPEDWPAGAKLSDQIPGIVDTVIEIAVTPNRPDALGHMGVAIDLAVA---LDSSTQ 202 Query: 191 ISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISAL 249 +P++ +L C + ++G +P+W+R RL VGLR+I+ Sbjct: 203 TPAHWKGGELPVDAGLVELPAGDRCGRYLGYALEGASVGTSPDWLRVRLHRVGLRAINDA 262 Query: 250 VDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 VDITN V ++ G P H FD +++++ + +R+A +GE + LD +L D++VIA Sbjct: 263 VDITNLVLMETGQPMHAFDRAKLAEGRVVIRQAAAGEPMTTLDETAIELVEDDLVIADAS 322 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQG 368 Q++AG++GG + D T+ +L+E+A ++P I RS K G TDS +RFERGVD G Sbjct: 323 APQALAGVMGGAQSMVDSGTSTLLLEIAYFEPKGIRRSAKRHGFHTDSSHRFERGVDDDG 382 Query: 369 MIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRI 427 + + + V L LCG A A +P I S+V+ L G+++ E++ RI Sbjct: 383 KLELAARRAVHLFSELCGAKAVAWAEATGERPQPPVIELRASQVEALLGLEIAAEETARI 442 Query: 428 LERLGF---SVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 LE LG +V G + + + PS+R D+ DL+EE++R +G+++I ++ P+ ++ Sbjct: 443 LEGLGVHLEAVEGASEPSWRCTPPSFRPDLTRSVDLIEEVMRHHGLERIVAKHNPVRELP 502 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---GQRELEILNPISAD 540 Q++ + L + E ++ +F S++ F R + + NP+ + Sbjct: 503 TPIPEDPQRTLAEGLAAALRGEGLHEQLSMAFCSEQALEPFTAEVPKARMVRLTNPLRSQ 562 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----------ENDTPE-----GQK 585 ++ MRT +LPGLL A N R E+ VY E T E ++ Sbjct: 563 LAVMRTHMLPGLLDAATVNRARHDRPVGFCELGRVYAWPEAAVEAGEGPTAEVDARLPRE 622 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + +G +EG + R DL A EP VS + + Sbjct: 623 STRLAVLRGQQ-VEGP----REGGLARQVLGDLLFALEAQGIWAEPRVSGEGV------- 670 Query: 646 SWYHPG-RSGIIKTSAEIVLGYFGEFHPNI 674 SW HPG ++G+ ++ G GE HP++ Sbjct: 671 SWLHPGVQAGLWVEDRQV--GVAGELHPDL 698 >gi|229552518|ref|ZP_04441243.1| phenylalanine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|258539891|ref|YP_003174390.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus Lc 705] gi|229314070|gb|EEN80043.1| phenylalanine--tRNA ligase [Lactobacillus rhamnosus LMS2-1] gi|257151567|emb|CAR90539.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus Lc 705] Length = 803 Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 215/819 (26%), Positives = 404/819 (49%), Gaps = 32/819 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ ++ VS E++ D ++ G+EV+ V + +A L + KVL+++ +P+ D Sbjct: 1 MDVSYDWLKELVNIPVSPEELADKVSRTGIEVDDVKHPDAGLKKIVVGKVLAIKPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLNLCQVDVGEDEPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDD--------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C+ +E+ +++ + P++ G L + D ++D +TPNR+D +G Sbjct: 120 CALQEIGFNENVVPKAYLNGIYVFNEPLEP--GSDALAALGMHDAVLDFEITPNRADALG 177 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +RG+A ++ A K + + ++ D+ + + + V + Sbjct: 178 MRGVAWEVGATYDEKPHFEEKLLTEGDRPVADYLSVEVKDAQDAPSYQLRVIDHVTVKES 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W+++RL G+R I+ +VDITN++ L G P H FD +++ S + VRRA +GE + Sbjct: 238 PLWLQRRLWNAGVRPINNIVDITNFIMLAYGQPLHAFDYAKLGSQHIEVRRARNGEPLTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E++L ++VI + ++AG++GG + + TT V+VE A ++P+N+ ++ Sbjct: 298 LDGGEHELDDSDIVITNGQVPVALAGVMGGLDSEISETTTTVVVEAASFNPVNVRKTALK 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 + +++ RFE+G++L + L V+ + L GG A+ ++ +V ++ Sbjct: 358 YNLRSEASSRFEKGINLADINRALDAAVAWMSDLGGGQAAKGTVSPTAVDAKDVVVDISL 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + G + + RI ++LGF V F V++P R D+ KADLVEE+ RIYG Sbjct: 418 DHINHVLGTTLSQDQVTRIFQQLGFGVEVADGLFAVAIPPRRWDIHIKADLVEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + S LP T + + Q R R + +L + + + + +++ + F Sbjct: 478 FDNLPST-LPTTTMTIGE-YTPAQKRIRRTRHLLEGLGLNQAITYGLTTEQAATRFKLQP 535 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 E ++ +P++ D + +R +++ GLL N R D AI+E ++ T G + Sbjct: 536 GEPTQVDSPMTKDHAVLRMNMVTGLLDVIKYNQARKETDVAIYEQGRIF---TKTGDQVR 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPS 646 I I +G + + + R VD F K + ++E + + + F + A S Sbjct: 593 PTEIEYLGGAI--TGHVAAKNWHQAARSVDFFYVKGIVMHLLEDYSLAEPVHFAVTQAVS 650 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I + V G+ G HP L FE+ LD++ + ++ +K Sbjct: 651 ELHPGQAADILVGTQRV-GFLGRLHPAFEHEQHLPATFV-FELDLDALFAAPRQ----EK 704 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + P V RD+A V + ++ I ++ + DVT+FDV+ G + G+KS Sbjct: 705 IAQPAPKFPAVTRDIALQVADTVTNAEVMQIFQQHGGAYLKDVTLFDVYAGSHMAPGQKS 764 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A + + T ++++ DR+ + A +R Sbjct: 765 LAYTLTYRRDDQTLTEEEVTQAFDRVKAALESDLGATIR 803 >gi|317121675|ref|YP_004101678.1| phenylalanyl-tRNA synthetase subunit beta [Thermaerobacter marianensis DSM 12885] gi|315591655|gb|ADU50951.1| phenylalanyl-tRNA synthetase, beta subunit [Thermaerobacter marianensis DSM 12885] Length = 861 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 227/807 (28%), Positives = 388/807 (48%), Gaps = 85/807 (10%) Query: 48 KVLSVERNPDLD-CAILRIDTG-KHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 +V +VE +P+ + + R+D G + + VV GAPNVR G+ A PG+ +P ++ Sbjct: 49 RVEAVEPHPEAEGLKVCRVDAGPRAGRLTVVTGAPNVRPGMAVAMAVPGATLP-GGAVIG 107 Query: 106 VRKIRGIESTGMMCSEKELMLSD---DSASIMEL------PIDAPVGGR-LSDYLELSDP 155 VR++RG+ S GMMCS EL L D D A + +L P P G L+ +L + Sbjct: 108 VRELRGVASQGMMCSVAELGLGDQPEDRAGLADLEELAGDPAAVPAPGTDLAGWLGWTGE 167 Query: 156 IIDVSLTPN-RSDCIGVRGIALDLVAAG---------LGKLKEINI-------------- 191 ++++SLTPN + C + G+A +L AA G ++ Sbjct: 168 VLELSLTPNYAAHCQSILGVARELAAATGRPWHYPWEAGGARDPAGDAGARPAAGAGAGA 227 Query: 192 ------------------SCPLSSESIP-------LEIKFDLDDSSLCKGFAMCCVKGVR 226 P +++P ++ + D+ C + + VR Sbjct: 228 EAAAPFAPPGPSRPDSQDGAPAVPQAVPEAVLDGPWPVRVRIVDTDGCGLYVARVLLDVR 287 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P W+R+RL A G+R I +VD+TNYV L+ G P H FD ++ + VR A GE Sbjct: 288 PGGSPLWLRRRLVAAGMRPIDRIVDVTNYVMLELGQPLHAFDGDAVTGRTVIVRSAEDGE 347 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD +E L+ ++VIA R +AG++GG ++ T VL+E A +DP + R Sbjct: 348 VLVTLDGRERALAAGDLVIADSRRAIGLAGVMGGANSEITPATRVVLLESAWFDPRRVRR 407 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKI 404 + + G+++++ RFE+GVD QG++ ++L ++ G A +AR + PR + Sbjct: 408 TARRHGLLSEAAQRFEKGVDPQGVLRAADRAMALFEAVGAGRAVPGAAVARGRAFPPRAL 467 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 + +++ G+D+ LERLGF + + +V VPS+R D+E + DL EE+ Sbjct: 468 PWRPGRLRQWLGVDLDDATLQASLERLGFRI--DPGAGQVHVPSYRTDIEGEVDLAEEVG 525 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE----- 519 R+YG+D+I ++ ED+ + L+ T + VLA EVV+W+F + Sbjct: 526 RVYGLDRIPAQLPGGRPAEDEVSPRLRL--TWQAREVLARAGAQEVVSWAFTRPQVWDDL 583 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + +R + +L+P++ + S +RT+LLPGLL N R ++EV V Sbjct: 584 RLPPDHPWRRAIPLLHPLADEHSLLRTTLLPGLLDVLAYNARRQQPGALVYEVGAVVVPA 643 Query: 580 TPEGQKYMAAGIRKGSSGI-EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDS 637 Q A +R G +G E G W+ E R D F K +++E V+ + Sbjct: 644 ALPLQDLPAEPVRIGLAGFGELGGLHWA----EAARPADFFTLKGVIEALLEELGVAGGA 699 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 R+E W HPGRS ++ + G+ GE HP + + L P+ E+ L+++ Sbjct: 700 CRWERAEEPWLHPGRSAMLWLG-DRPAGWLGELHPRVAAAWDLKRPVAA-ELDLEALLPV 757 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 + + V + V+RD+A + + +PA + I+ V L++ V +FD + G Sbjct: 758 VRPVPAYRPVPRFPA---VRRDIAVLAPRDLPAAVIGERIREVAGPLLEAVHLFDRYTGH 814 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + EG+ S+A ++ + T D ++ Sbjct: 815 PVPEGQVSLAFALIYRAADRTLTDAEV 841 >gi|300173746|ref|YP_003772912.1| phenylalanyl-tRNA synthetase subunit beta [Leuconostoc gasicomitatum LMG 18811] gi|299888125|emb|CBL92093.1| Phenylalanyl-tRNA synthetase beta chain [Leuconostoc gasicomitatum LMG 18811] Length = 819 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 220/842 (26%), Positives = 427/842 (50%), Gaps = 62/842 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK--VDNREALS------PFTIVKVLSV 52 MK +L WL ++L+ + L D + + VE+ V+ E + + +V+SV Sbjct: 1 MKTSLKWLNEYLNNSIDLN--ADAVADLAERVERTSVEISETTTLARQQDGLVVARVVSV 58 Query: 53 ERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM----IVNVR 107 +PD D I ++D G+ +VV GAPNV G L V A G+ I + ++ Sbjct: 59 LPHPDSDHMVITQVDIGESTLTKVVTGAPNVAEGQLVVLAKVGAHIINHETGELNVLKPV 118 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL---SDYLE----------LSD 154 K+RG +S GM+ + +E+ A P D G + S++L +++ Sbjct: 119 KLRGEDSNGMLVALQEIGFDSKIA-----PKDFETGIYVFNNSEHLNPGDDALSILGMTE 173 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP---LSSESIPL--EIKFDLD 209 P++D LTPNR+D + + G A + G + + +++ P L P ++ + Sbjct: 174 PVLDTDLTPNRADMLSMIGTAYEF-----GAMLKQSVTIPDFDLVEYETPASDQVSVMIR 228 Query: 210 DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 D SL +A+ V V+ +P W+++RL G+R I+ +VDITNY+ L G P H FD Sbjct: 229 DDSLASKYAVRVVNHVKIGDSPLWLQKRLWNAGMRPINNIVDITNYMMLMYGQPLHAFDL 288 Query: 270 SRIS-DVLTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 +++ L +RRA E+++ LD Q+ DL S +++VIA+D +AG++GG ++ D+N Sbjct: 289 DKLNGQKLYIRRAEKNEELVTLDGQKRDLRSGEDIVIATDEEALMLAGVMGGLNSEVDEN 348 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 T ++++E A+++P + + + + +++ RFERGV+ L H SL+ L GG Sbjct: 349 TENIVLEGAIFNPSLVRATARRHNLHSEASARFERGVNWDATFTALDHAASLVDDLAGGQ 408 Query: 388 ASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 + + T + ++ + ++ V ++ G + +E+ ++L F + V++ Sbjct: 409 VARGRVTAVDTKRDNIVLSLTAKRVNQILGTQLTLENIALFFKQLAFDYTNDGASLHVTL 468 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 P+ R D+ +ADL+EEI R+YG D + LP + L+LQQ + R + ++ S Sbjct: 469 PARRADMSIEADLIEEIARLYGYDNLPV-TLPYGPTTPGK-LTLQQRQIRASRHIMESLG 526 Query: 507 MMEVVNWSFIS--KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 + + ++++ + K Q + + + P+S+D + R +LL GLL+ N++ ++ Sbjct: 527 LNQAISYALTTPLKAQQFAEDRTAKVVSLDYPMSSDRTTARQNLLAGLLEDVAYNINHSV 586 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 D A++E V+ + + I + + G+ S + ++ R VD +D K Sbjct: 587 HDIALYEQGRVFI--AKDNSDELPIEIEHIAGVLTGNYETSSWQHLKKARAVDFYDIKGI 644 Query: 625 ALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + ++ + ++++R+ + S HPG++ I +A++ LG+ G+ HP + ++ Sbjct: 645 VSAYLDQ-IGVENVRYVATDRHSNMHPGQTADIY-AADVYLGFVGQIHPLLTKSQKMA-A 701 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV--D 741 + GFE+ L ++ + K + K+ S + RD A +VD+ + + +I+ Sbjct: 702 VFGFELNLFAVMAAAKSDVQYNKI---SRFPQMSRDAALLVDESVQHAVIETVIRGAAGS 758 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +L+ D+T+FDV+ G +L GK+S+A + Q +T + ++ +R+ + +VK+ N Sbjct: 759 KLV-DITLFDVYTGDNLPHGKRSLAYSLTYQDNDETLVEAEVNSDFERVTDALVKQLNVE 817 Query: 802 LR 803 +R Sbjct: 818 VR 819 >gi|312892246|ref|ZP_07751742.1| phenylalanyl-tRNA synthetase beta subunit [Mucilaginibacter paludis DSM 18603] gi|311295221|gb|EFQ72394.1| phenylalanyl-tRNA synthetase beta subunit [Mucilaginibacter paludis DSM 18603] Length = 799 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 241/828 (29%), Positives = 390/828 (47%), Gaps = 55/828 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK + TD S E++ LT IGLEVE ++ ++ L I V ++P Sbjct: 1 MKISYNWLKQFIQTDKSPEELSCILTGIGLEVESLEKVQSIPGGLEGLVIGYVKECVQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRKI 109 + D + ++D G +++QVVCGA NV G +G P P +N KI Sbjct: 61 NADRLRVTKVDVGTGEDLQVVCGAANVAAGQKVVVATVGTTVYPLKGEP---FKINKSKI 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII-DVSLTPNRSDC 168 RG S GM+C+E E+ L + IMEL DA VG DY +L+D + ++ LTPNR+D Sbjct: 118 RGEVSEGMICAEDEVGLGESHDGIMELDSDAEVGALAKDYFKLNDDYLYEIGLTPNRADA 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G A D+ A + + ++S ++ LEI +++++ ++ + GV Sbjct: 178 ASHLGAARDIAAFLKTDILKPDVSA-FRVDNHELEIDVVVENAAAAPRYSGLTISGVEVK 236 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++++L +GLRSI+ +VD TNYV G P H FDA I + V+ Sbjct: 237 DSPKWLKEKLAVIGLRSINNIVDATNYVLHGLGQPMHAFDADAIRGGKIVVKTGLESVTF 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ + LS D+++I IAG+ GG +G +T ++ +E A ++ +++ ++ Sbjct: 297 KTLDDVDRKLSGDDLMICDAIGPMCIAGVFGGAESGVSQSTKNIFLESAYFNAVSVRKTS 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVF 406 K G+ TD+ +RFERG D + LK+ LI + GG +S+I P + Sbjct: 357 KRFGLKTDASFRFERGTDPDITVFALKYAALLIKEIAGGVISSEIFDFYPAPVAPFDVEL 416 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQDVEEKADLVEEILR 465 V RL G +P + I+ L + GE + + VP +R DV D++EEILR Sbjct: 417 SYKNVDRLIGKSIPHGEIKAIITALDIVITGETAEGLSLKVPPYRVDVTRDVDVIEEILR 476 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSR---TRYVKRVLASRAMMEVVNWSFISKEQSV 522 IYG + I+ +P TQ+ N S + + + +L + E+++ S +SV Sbjct: 477 IYGYNNIE---IP-TQIRASLNTSGRPDKDTVQNTISDILTANGFNEIMSNSLT---KSV 529 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 ++ILNP+S+D+ MR +LL L+A N +R D +E Y E Sbjct: 530 YAENIDEAVKILNPLSSDLDIMRQTLLFSGLEALAYNQNRRNMDLKFYEFGKTYNLKEEK 589 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLD 636 E Q++ A G+ E W+ K+ F +L A D L + F D Sbjct: 590 YVENQRF--ALFLSGAMQTEN----WNAKTTA-ATFYNL-KAVVDGLMARLNVTDFTVED 641 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + Y+ G ++ FG L + + + D + Sbjct: 642 TADTNFAYGLKYNRGNKTLVS---------FGAVSKPALKKADVDKEVFYADFNFDVLLG 692 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG 755 KK T + V S V+RDL+ ++D+ + L I + +R L+ DV VFDV+QG Sbjct: 693 LAKKNTIVYREV--SKFPAVRRDLSMLIDKGVSFQQLKGIAQKTERKLLKDVNVFDVYQG 750 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 L GKKS A+ ++Q + T D I +M +++ N K+ A +R Sbjct: 751 DKLPSGKKSYALSFVLQDEEKTLTDKAIDAIMQKLIYNFGKEAGAEIR 798 >gi|148273183|ref|YP_001222744.1| phenylalanyl-tRNA synthetase subunit beta [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831113|emb|CAN02065.1| pheT [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 847 Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 244/861 (28%), Positives = 384/861 (44%), Gaps = 73/861 (8%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ +SWL +H L V+ E + +L +GLE E V P + +VL P Sbjct: 1 MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISGPVVVGQVLEASPEPQT 60 Query: 59 D------CAILRIDTGKHQE------IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + C++ G +VCGA N VG V + PG+ +P ++ Sbjct: 61 NGKTINWCSVRVAPEGATAADGGADVRGIVCGAHNFVVGDKVVVSLPGAVLP-GPFPISA 119 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RK G S GM+ S +EL L ++ I+ L +D VG L L D ++V++TP Sbjct: 120 RKTYGHVSDGMIASSRELGLGEEHDGILVLSSLGLDPEVGTDALALLHLDDRAVEVNVTP 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKG------ 216 +R +RGIA + A + + + L + P++ ++ +DD++ +G Sbjct: 180 DRGYAFSIRGIAREYAHATGARFTDPADALALLAADAPVQGVEVRVDDAAPIRGRSGADV 239 Query: 217 FAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F V G+ + P WM RL G+RSIS +VDITNYV L+ G P H +D R+ Sbjct: 240 FVTRVVSGLDVSRPTPPWMVSRLTLAGVRSISLVVDITNYVMLELGQPLHGYDLDRLQGG 299 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VRRA GE ++ LD +E L P+++VIA +AG++GG T+ VL+E Sbjct: 300 IVVRRAAEGETLVTLDGRERALHPEDLVIADGSGPVGLAGVMGGAATEIGAGTSRVLIEA 359 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A +DP++IAR+ + + +++ RFERGVD + V L+ L GG A + Sbjct: 360 AGFDPVSIARTARRHKLPSEASKRFERGVDPRIAPAAAARAVQLLEDLAGGHAEGLGSIL 419 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 + T I L G+D ++ L +G ++ V+ P+WR D+ + Sbjct: 420 DTTAPREAIELPLGYPASLVGVDYTADEVRHALVDVGCALEERDGILGVTPPTWRPDLRQ 479 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 +ADLVEE+ RI G D+I P L R L+ Q R LA+ + EV+ F Sbjct: 480 RADLVEEVARIVGYDRI---PAVLPVAPPGRGLTAAQRLRRQASIALAASGLSEVMGSPF 536 Query: 516 ISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S+EQ+ FG RE + + NP+ +R SLLPGL+ RN+ R D AIFE Sbjct: 537 ASEEQNARFGAADREDAPAVSLANPLDVAFPYLRRSLLPGLVDIARRNLSRGSTDLAIFE 596 Query: 572 VSHVY--ENDTPEGQKYMAAG--------IRKGSSGIEGSGR-----LWSDK-------S 609 V+ G M G +R +GI R + D Sbjct: 597 SGTVFLPRAGVAYGSPEMPPGAARPDADTLRALDAGIPPQPRHVGVLILGDAVPKQPGTP 656 Query: 610 EERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK---TSAEIV 663 +R VD DA A A+ V +RFE G+ HPGR+ ++ ++ Sbjct: 657 AQRAGLVDALDAVRQLAHAVGV--------EIRFEQGSHIAMHPGRTAAVEAVTADGPVI 708 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 +G+ GE P + L + EV LD + +V L+S+ +DL+ + Sbjct: 709 VGFAGELLPALAAELDLPERVALAEVDLDRL---VGLAGGAVEVRTLTSMPVATQDLSLV 765 Query: 724 VDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 V +PAG L+ +I L++ + D ++G + G +S+ + + T + Sbjct: 766 VPLEVPAGELLRTVIAGAGELLESARLVDDYRGPGVEAGTRSLTFALRFRAPDRTLTAAE 825 Query: 783 IRILMDRIVENVVKKTNAVLR 803 D V ++ A LR Sbjct: 826 ASAARDGSVRLAAERFGAALR 846 >gi|94967749|ref|YP_589797.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Koribacter versatilis Ellin345] gi|94549799|gb|ABF39723.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Koribacter versatilis Ellin345] Length = 671 Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 201/643 (31%), Positives = 325/643 (50%), Gaps = 39/643 (6%) Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDD 210 E I ++ LT NR D + G+A + A +LK + P + + I +L+D Sbjct: 38 EHGHTIYEMDLTTNRVDAMNHYGVAREASAIFDIELKPVTPKLPKAEGTAKFAI--ELED 95 Query: 211 SSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDAS 270 + C + V+GV+ +P + QRL+ +G R+I+ + D +NY + G+P+H FD Sbjct: 96 AQGCPRYTARIVRGVKVASSPKNIAQRLELLGSRAINNIADASNYALFEIGHPTHAFDLD 155 Query: 271 RISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 + + VRRA GE + LD + L+ ++VIA + ++AG++GG + TT Sbjct: 156 TLEGGKIVVRRAREGETLKTLDGETRKLTSQDLVIADAVKAVALAGVMGGFDTMITEKTT 215 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS 389 +VL+E A +DP +I + K LG+ TD+ +R+ERG D+ + LIL GG Sbjct: 216 NVLIESAWFDPASIRHTAKRLGMHTDASHRYERGADIAITALACDRVAELILETAGGKLE 275 Query: 390 DI---CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 IAR I +PR + SEVKR G+D+P ++ RIL RLGF V GE V++ Sbjct: 276 GEKIDAIARKI--EPRTVQLRRSEVKRHLGLDLPEQEIERILRRLGFGVDGE----TVTI 329 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 PSWR DVE + D++EE+ RI+G + + LP + L +Q R R V+ +L + Sbjct: 330 PSWRLDVEREIDVIEELARIHGYNNFPN-TLP-SFAGGVIELPDEQKRAR-VREILLALG 386 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 E ++ +F SKE + FGGG+ L I NP++ + +RTSLLPG+L N++R D Sbjct: 387 YNEAISLTFASKEDAAQFGGGE-PLAIANPLNEEQGYLRTSLLPGMLGMIAYNLNRGNTD 445 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE V+E ++ + IE S + + D FD K D Sbjct: 446 VRLFESGDVFEKTGERFEERRRLCFAATGNSIEAS-------VHTKAKATDFFDLKGDVE 498 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 ++ F ++ F++ P +YHPGR+ I V GY G+ HP++ D L Sbjct: 499 DLLAAFTK-RTVYFDTLVPEYYHPGRAARIVLDGATV-GYVGQLHPSVADVRKLKQ---- 552 Query: 687 FEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL- 743 +VYL I + + K + +S V+RD +F+ D + T + + V+ L Sbjct: 553 -DVYLAEILQERLFQHDLKAPRFTAISRYPAVERDFSFVFDDAV---TFDRVREAVEALG 608 Query: 744 IDDVTVF---DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 I ++T F ++F+G S+ GK S ++ Q + T RD+++ Sbjct: 609 ITEMTSFQAVEIFRGGSVPAGKYSFLVRAAFQSAERTLRDEEV 651 >gi|119716692|ref|YP_923657.1| phenylalanyl-tRNA synthetase beta subunit [Nocardioides sp. JS614] gi|119537353|gb|ABL81970.1| phenylalanyl-tRNA synthetase beta subunit [Nocardioides sp. JS614] Length = 827 Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 247/858 (28%), Positives = 409/858 (47%), Gaps = 85/858 (9%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 MK +SW+++H+D V+ E + LT++GL++E +++ A P I +VL+++ P Sbjct: 1 MKTPVSWIREHVDLPDGVTTEDLTRRLTALGLKLEAIESAGADITGPLVIGRVLTMQPEP 60 Query: 57 DLD------CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + C + + G + +VCGA N G L V PG + ++ RK Sbjct: 61 QKNGKTINWCTVDVGAANGTGEPQGIVCGAHNFAPGDLVVVVLPGGVL-AGGFEISARKT 119 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDC 168 G S GM+CS +EL + +D I+ LP DA G + D L L + +I+ + P+R+ Sbjct: 120 YGHVSAGMICSARELGIGEDHDGIIVLPPDAGEPGEGAFDVLGLGEEVIEFEINPDRAYA 179 Query: 169 IGVRGIALDL-VAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + VRG+A + +A G + P + + P+ I DD C F V G Sbjct: 180 LSVRGVAREAALAYGAPYRDPADRPVPAPNRDGYPVVI----DDPDGCPMFVARTVSGFD 235 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 P WM +RL+ G+R IS VD+TNYV L+ G P H +DA ++ + VRRA +GE Sbjct: 236 PTAPTPGWMARRLQQCGMRPISLAVDVTNYVMLETGRPIHGYDADKLQGPIRVRRARAGE 295 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD + +LS +++V+ D I + G++GG+ ++TT VLVE A WD +++ R Sbjct: 296 RLTTLDGADRELSTEDLVVTDDSGIIGLGGVMGGETTELSESTTTVLVEAAHWDAVSMFR 355 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKI 404 +GK I +++ R ERGVD +V L+ + GGTA + + +P I Sbjct: 356 TGKRHKISSEAGKRNERGVDPVITPAAADRVVELLTTYGGGTAEPGVTVVGTAPARP-TI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPS-WRQDVEEKADLVEEI 463 R++G+ + ++ LE +G +++ + D + PS WR D+ + DLVEE+ Sbjct: 415 TIGYDLPARVTGMAIDAATTVTNLEAVGCALV-KADTTLTATPSPWRPDLNDPFDLVEEV 473 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RI G DQ+ S L + R L+ +Q R V R LA +EV+++ FI Sbjct: 474 ARIVGYDQVPSV---LPREAAGRGLTREQRLRRRVGRTLAGAGCVEVISFPFIGDAAFDA 530 Query: 524 FG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV--- 575 G + + + NP+S++ + T+LLPGLL+A RN+ R + ++FE V Sbjct: 531 LGLEADDPRRHTVRLANPLSSEEPSYTTTLLPGLLRAAARNLGRGASGVSLFETGTVAFP 590 Query: 576 ----------------------YENDTPEGQKYMA---AGIRKGSSGIEGSGRL--WSDK 608 + PE ++ AG R+ +G G+GR WSD Sbjct: 591 VDRGPAPIYGVDWRPTADEVAKLDEALPEQPLHLVVVLAGERE-RAGWWGAGRESGWSDA 649 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + L L V V +D + R +HPGR + + E+ LG+ Sbjct: 650 -------IALVRRLGTELGVA---VDVDGATRMP------WHPGRCAQVSVNGEL-LGHA 692 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 GE HP + FGL E+ LD++ + T S+ K D+A +VDQ Sbjct: 693 GELHPKVCQSFGLPPRSAAVEIDLDALMRHARDVTPGPD---FSTYPLAKEDVALVVDQA 749 Query: 728 IPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + A + ++ L++ + +FD++ G+ +G G+KS+A + + T +++ Sbjct: 750 VTAAEVGAALREGAGELLESIRLFDLYTGEQVGAGRKSLAFALRFRAPDRTLTEEETAAA 809 Query: 787 MDRIVENVVKKTNAVLRS 804 D V ++T AV RS Sbjct: 810 RDAAVALAAERTGAVQRS 827 >gi|189485299|ref|YP_001956240.1| phenylalanyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170287258|dbj|BAG13779.1| phenylalanyl-tRNA synthetase beta subunit [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 791 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 229/811 (28%), Positives = 405/811 (49%), Gaps = 47/811 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MK + WLK +D ++S +++ L S+G+E V VKVL V ++P D Sbjct: 1 MKLSYKWLKKFIDFELSPQELASMLISVGIETSVVSTGCDWHSVVTVKVLEVLKHPGADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ +++ G ++ +VCGA N+ G + A G+ +P N +N KIRGI S GM+C Sbjct: 61 LSLCKVNDG-SKDYSIVCGAKNIAAGQIVPLAKIGAVLP-GNFKINKSKIRGIVSEGMIC 118 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE +L L +S I+ L + +G L + L D I+++ +T NR DC+ G+A ++ Sbjct: 119 SEADLGLKKESDGILMLDKNTKIGVALENVLSGLDSILEIEITTNRGDCLSHLGVAREIG 178 Query: 180 AAGLGKLKEINISCP--LSSESIP----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A KL++I +S P + + +IP +E+K DL C + + GV+ +P W Sbjct: 179 A----KLRKI-LSFPTMIKTFNIPYLNCVEVKSDL-----CHRYIGSVISGVKICPSPGW 228 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 + L+ G+R ++ +VD+TNYV ++ G P H FD +++S + VR+A EKI+ALD Sbjct: 229 ITDALEKSGIRPVNNVVDVTNYVMIELGQPLHTFDITKLSSRKVVVRKAVDYEKIIALDG 288 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +EY L + +VIA + +IAG++GG+++ D+ T V +E A++D ++I ++ K L + Sbjct: 289 KEYKLDSEMLVIADSEKPVAIAGVMGGEYSAIDEKTETVFLESAIFDAVSIRKTSKKLNL 348 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 + S YRFERG+ +LI+ + GG + + Y+ I +V Sbjct: 349 SSGSSYRFERGLGWDITELASWRAANLIIEIAGGRMDAREDLQIVKYERADIALRVEKVS 408 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 ++ G V + IL LG + +VPSWR D++++ DL+EEI RI G D I Sbjct: 409 KILGCVVKEAEITEILRFLGIDLRSRGTIILCTVPSWRNDIKKEVDLIEEIARIKGYDAI 468 Query: 473 KSEPLPLTQVED--KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 S T + + SL + + L + EV+N+SF + F + Sbjct: 469 TSPGKRCTATAEVCVSDNSLLHAVVEEFRVKLNGFSFSEVLNYSFSEITELEKF-DLKYY 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +I NPIS + +R SLLP L K N++ +FE ++ T G++ A Sbjct: 528 YKIANPISKENEVLRPSLLPALYKNLLLNIEWGSETVTLFEYGKIF---TGLGERKAFAV 584 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI--EPFVSLDSLRFESGAPSWY 648 I G E W ++ D + +++ + F+ ++L A S+Y Sbjct: 585 IMYGKVWQE----WWKWAEQKNSPKYDFYFGGGIVRNILPSDEFIIAENLN----AESYY 636 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP-ISQKKRTKTKKV 707 H G++ + + V G FG P+I ++ + FEV L+S + K++ K Sbjct: 637 HSGKTASVVYKGKPV-GQFGVLKPSITS--DIAGDVFYFEVNLESFENVCAGKKSLYK-- 691 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR---LIDDVTVFDVFQGKS-LGEGKK 763 S VKRD++ D+ + + +IKNV + ++ + ++F V+ +S +G+GK Sbjct: 692 -AYSKFPEVKRDISITADKTLQFSEIEKVIKNVIKSGGILKEYSLFSVYSDESKVGDGKI 750 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 S + ++ + + T ++++ M+ +++ + Sbjct: 751 SYSFRLSYKNSEKTLTNEEVNKDMNVLLQKL 781 >gi|237756987|ref|ZP_04585446.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] gi|237690851|gb|EEP60000.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium yellowstonense SS-5] Length = 803 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 238/810 (29%), Positives = 389/810 (48%), Gaps = 40/810 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MK SW+K+ +D D+ + + L + G+E + + T VKVLSV ++P+ D Sbjct: 1 MKVPYSWIKEFIDIDIPVSDVVAKLNTTGIETTFYKFGQYIPNLTTVKVLSVIKHPEKDK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 I ++ G +E Q++ GA NV+ + + A G+ I + + S GM+ Sbjct: 61 LYICKVSDG-SREYQIITGADNVKENDVVILAKVGAVIKGRE--IKLVSFGSYTSEGMLL 117 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIALDL 178 S +EL + + S I L + PVG + L L D I+++ +TPNR D + VRG+A ++ Sbjct: 118 SLEELEVEEKSEGIFILDENTPVGADPNKILGLGEDYILEIEITPNRGDALSVRGLAREI 177 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A K KEI L+ + IP+ I+ D + +K V+ +P +R +L Sbjct: 178 GAIFNLKRKEIQPKPVLTDKEIPINIETDK-----VYRYIGTTIKNVKIKNSPLDIRLKL 232 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 G+ I+ +VDITNYV L G P H FD ++ +TVR A GEKI+ LD QE +L Sbjct: 233 IKSGISVINNIVDITNYVLLQEGQPLHAFDLDKLEGGITVRYAKEGEKIITLDGQEKELK 292 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P +VVIA + +IAG+IGG+++ D+NT ++L+E A++DP ++ ++ K LGI+TDS Y Sbjct: 293 PTDVVIADGKKALAIAGVIGGENSKIDENTKNILLEAAVFDPASVRKTSKRLGILTDSSY 352 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD++ LIL+L GG Y P+ +V V ++ G Sbjct: 353 RFERGVDVEHTSKASNFATYLILNLAGGEVEAYKDVYVKPYTPKTVVLKPELVGKILGEK 412 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSEPL 477 + + ILERL + ++ +P +R D+E DLVEE+ RIYG D + Sbjct: 413 IDASEIKSILERLEIPTQIQENQINAEIPPFRAYDLERPIDLVEEVARIYGYDNF-TPTY 471 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P VE SL V+ EV+N++F S+E E++I N I Sbjct: 472 PRVPVEAYEK-SLYYDFDNKVRTYFLDNGFTEVLNYTFTSEEIYNALKLPIPEIKITNYI 530 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ-KYMAAG-IRKGS 595 S +R ++ LL+ N+ + +IFE+S + D E + +A G + G Sbjct: 531 LKSHSILRDRIVVSLLENLKENLRFGRKNLSIFELSSTFFKDFEEIRVGCLAVGKLVDGF 590 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSG 654 + E +L + S F+ L + L+ + + + +F + + HP S Sbjct: 591 NYTEKERKLSTTHS---WNFLKLKGVVENLLNKL----GIKNYQFIDENIEVFLHPYESA 643 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT-----------K 703 I+ + +G+ G+ HP I + E+ L +P +K K Sbjct: 644 NIQVNG-YDIGFIGKIHPEIAHKLEIPKDTYVAELKLRYVPREIEKENLLDGYLYTYYLK 702 Query: 704 TKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEG 761 + VV L RDLAF++++ + G I + + +V +FDV+ L E Sbjct: 703 KEPVVFQELPKFPSAYRDLAFVIEESVKVGKFKEDILKASKYVKEVKLFDVY---FLSEN 759 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 KKSVA V + + D+++ I+++ I+ Sbjct: 760 KKSVAFNVEFFNPEKSLSDEEVNIIVEEIL 789 >gi|254425140|ref|ZP_05038858.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] gi|196192629|gb|EDX87593.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. PCC 7335] Length = 822 Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 230/839 (27%), Positives = 399/839 (47%), Gaps = 52/839 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDL- 58 M+ +++WLK+ ++ D S E + + LT G EVE++++R + + +V +VL +PD Sbjct: 1 MRVSVNWLKELVEFDFSPEALAEALTMAGFEVEEIEDRRSWAEGVVVGRVLDTSPHPDAA 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D + Q +VCGA NV A GS +P+ ++ V R++RG+ S GM+ Sbjct: 61 KLSVCTVDINQGQTSTIVCGAANVGANTCVPVATVGSYLPKVDLKVKPRELRGVASAGMI 120 Query: 119 CSEKELMLSDDSASIM---ELPIDA---PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L+ DS I E + +G + L L D ++DV+ T NR+D + + Sbjct: 121 CSLAELGLARDSEGIYIFDEQQFEQGEISIGQDVRPLLGLDDFVLDVTSTANRADALSMV 180 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK + IS L L+ + L + +C + ++G+R +P Sbjct: 181 GIAREISAITGNPLK-LPISDDLPGSKTALDKVDITLSEPKICPIYMGSVLEGIRIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------LTVRRACSG 284 W++QRL A G R+I+ +VD+TNYV L+ G P H FD R+ V ++VR A Sbjct: 240 TWLQQRLIAAGTRAINNVVDVTNYVLLEWGQPLHAFDLDRLMAVGEQDSLSVSVRYATES 299 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E ++ LD+QE L+ V+I ++ ++AG++GG D T V +E A +D I Sbjct: 300 ESLVTLDDQERQLAAQTVLITANDVPVALAGVMGGAKTEVIDTTERVFLEAAYFDSAVIR 359 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----------SDICIA 394 +S ++ G+ T++ R+ERGV+ + + L + G T +I Sbjct: 360 KSARSQGLRTEASARYERGVNPAELKLARDRALQLFIETAGATLVGQGEDRTEIGNISPT 419 Query: 395 RNITYKPRKIVFMNSEV---KRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWR 450 R ++ + ++ + EV +D ++L L +LG + D + V +P +R Sbjct: 420 REVSLRLSRVHQILGEVVEQGSTKALDKATVETL--LSKLGCKATATDEDTWTVEIPPYR 477 Query: 451 -QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 +D+E + DL+EE+ R+YG D+ + L + LS + +R ++ + E Sbjct: 478 YRDLEREIDLIEEVARLYGYDRFAN---TLPSQTSRGYLSQAAALSRRLRAAFRGAGLTE 534 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 V+++S S R++ I NP+ + S +R LL GL+ A N+++ Sbjct: 535 VIHYSLTSPSSD-------RQVVIANPLFTEYSALRIDLLDGLIAAFELNINQGNGPLNA 587 Query: 570 FEVSHVYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 FE+ V+ +D PEG + + G GR W + ++ER + ++AK Sbjct: 588 FEIGTVFNQPDDDPEGDPIESIKVSGIVGGDARQGR-WENSNQERP--LTWYEAKGILEC 644 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 V + R E+ HPGR+ + LG F + HP + L + F Sbjct: 645 VFDNLGLAVDYRAEA-RDERLHPGRTAGLFVRGRTRLGTFAQLHPELRRERDLPEAVYVF 703 Query: 688 EVYLDSIPIS-QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLID 745 E+ + + KR K K S RDLAF + L + K+ +L++ Sbjct: 704 ELDWAVLEMCLTGKRGKAVKFEAFSRYPASDRDLAFFAPIEVNVAELQKAMNKSGGKLLE 763 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 VT+FD ++G+ + EG +S+A +++ + D DI + +I + K LRS Sbjct: 764 SVTLFDEYRGQGVPEGSRSLAFRLVYRASDHNLTDKDIDPIHQKIRATLEKTYKVSLRS 822 >gi|309806125|ref|ZP_07700144.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|309810254|ref|ZP_07704099.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|312874255|ref|ZP_07734289.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|312875654|ref|ZP_07735655.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|315653626|ref|ZP_07906546.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|325912649|ref|ZP_08175032.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] gi|308167480|gb|EFO69640.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 03V1-b] gi|308169526|gb|EFO71574.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 2503V10-D] gi|311088908|gb|EFQ47351.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2053A-b] gi|311090325|gb|EFQ48735.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2052A-d] gi|315488988|gb|EFU78630.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|325478070|gb|EGC81199.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners UPII 60-B] Length = 804 Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 226/825 (27%), Positives = 409/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGQDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDSNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG +++D + + +D + K ++ IE + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYADNWQHLDQNIDFYYVKGQLTNIFIELGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|256426188|ref|YP_003126841.1| phenylalanyl-tRNA synthetase subunit beta [Chitinophaga pinensis DSM 2588] gi|256041096|gb|ACU64640.1| phenylalanyl-tRNA synthetase, beta subunit [Chitinophaga pinensis DSM 2588] Length = 810 Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 235/833 (28%), Positives = 406/833 (48%), Gaps = 54/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M + +WL D+L + E++ LT IGLEVE ++ E+ L I +VL+V +P Sbjct: 1 MTISYNWLCDYLPVKPTPEELSVILTRIGLEVESLEQFESVKGSLEGLVIGEVLTVAPHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI-PENNMIVNVRK--IRGI 112 + D + ++TGK + + +VCGAPNV VG V AP G+ I P + ++ ++K IRG Sbjct: 61 NADKLRLTTVNTGKGEPLHIVCGAPNVAVGQKVVIAPIGATIYPASGELLTMKKAKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 ES GM+C+E E+ L A IM L P P + + D + ++ LTPNR D + Sbjct: 121 ESHGMICAEDEIGLGGSHAGIMVLDPSLQPGTPAREVFKPVQDWVYEIGLTPNRMDAMSH 180 Query: 172 RGIALDLVAAGLGKLKE------INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A D+ A + + L + PL I +++ C ++ + GV Sbjct: 181 LGVAKDVCAYLNNTENTLNNKALVPVLTALPKAATPLSISVAIENQDACPRYSGISITGV 240 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSG 284 + +P+W++ +L A+G+R I+ +VDITN++ + G P H FDA I+ + + V+ Sbjct: 241 KIAPSPDWLKNKLLAIGVRPINNIVDITNFILHETGQPLHAFDADAITGNKVIVKNLPQN 300 Query: 285 EKILALDNQEYDLSPDNVVIAS-DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + LD +E L +++I + + IAG+ GG +G D T ++ +E A + P +I Sbjct: 301 TLFVTLDEKERKLDAADLMICNGNSEPMCIAGVFGGLRSGVTDATQNIFLESAWFSPASI 360 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + G+ TD+ RFE+GVD+ + VL+ +LI L GG A+ I ++ +P++ Sbjct: 361 RPTSFRHGLRTDAAARFEKGVDISNTVYVLQRAAALICELAGGEAASEVI--DVYPQPKQ 418 Query: 404 ---IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADL 459 + S +++LSG P + + IL LGF ++ + +K VSVP + D+ AD+ Sbjct: 419 QTEVTSTWSYIRKLSGKAYPEDKIVNILSSLGFGILERDGEKLRVSVPYSKPDISIPADI 478 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME-----VVNWS 514 VEE++RI G+D I+ L ++ R + LA+ E + N Sbjct: 479 VEEVMRIDGLDNIEIPSQVLITPAANAKPDKEKVREK-AANYLAANGFNEIFTNSITNSK 537 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + ++E VL +R ++++N +SAD+ MR S+L L++ N++R + FE + Sbjct: 538 YFTRE--VL----ERTVKMINSLSADLDVMRPSMLETGLESVSHNLNRRNDNLLFFEFGN 591 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPF 632 Y E KY S + G R W K+E VD F K ++ Sbjct: 592 TYA--VQEQGKYEETA--HLSLYLTGQKRTESWMHKAEP----VDFFFLKGYVQNLFHQ- 642 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + ++ L++ G +K + LG + L F + P+ ++ + Sbjct: 643 LGINGLQWAEEETDGLQSGWQIRVKNKPVVNLGAVSA---SKLKQFDIKQPVWFADINWN 699 Query: 693 SI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 + + QK K++ + V+RDLA I+D+ + + K V L+ D+ +F Sbjct: 700 IVLGLLQKSDNFYKEIPKFPA---VRRDLALILDKQVKFAAVEAAAKTVKSALLQDLNLF 756 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DVF+ + LG KKS A+ Q + T D +I +M+++V+ + A +R Sbjct: 757 DVFESEKLGANKKSYAVSFTFQDAQKTLTDKEIDSVMEKLVKAFEGQLQAEIR 809 >gi|199597196|ref|ZP_03210628.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus HN001] gi|258508712|ref|YP_003171463.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus GG] gi|199592000|gb|EDZ00075.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus HN001] gi|257148639|emb|CAR87612.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus rhamnosus GG] gi|259650018|dbj|BAI42180.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus GG] Length = 803 Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 218/819 (26%), Positives = 407/819 (49%), Gaps = 32/819 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ ++ VS E++ D ++ G+EV+ V + +A L + KVL+++ +P+ D Sbjct: 1 MDVSYDWLKELVNIPVSPEELADKVSRTGIEVDDVKHPDAGLKKIVVGKVLAIKPHPNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G+ + Q+VCGAPNV G + A PG+ I +N+ + K+RG ES GM+ Sbjct: 61 HLNLCQVDVGEDEPRQIVCGAPNVAAGQTVIVALPGARI-ADNVKIKKGKMRGEESLGMI 119 Query: 119 CSEKELMLSDDSASIMELP----IDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 C+ +E+ +++ L + P+ G L + D ++D +TPNR+D +G+R Sbjct: 120 CALQEIGFNENVVPKAYLNGIYVFNEPLKPGTDALAALGMHDAVLDFEITPNRADALGMR 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A + V A + PL+ P+ + ++ D+ + + + V + Sbjct: 180 GVAWE-VGATYDEKPHFE-EKPLTEGDRPVADYLSAEVKDAQDAPSYQLRVIDHVTIKES 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W+++RL G+R I+ +VDITN++ L G P H FD +++ S + VRRA +GE + Sbjct: 238 PLWLQRRLWNAGVRPINNIVDITNFIMLAYGQPLHAFDYAKLGSQHIEVRRARNGEPLTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD E++L ++VI + ++AG++GG + + TT V+VE A ++P+N+ ++ Sbjct: 298 LDGGEHELDDSDIVITNGQVPVALAGVMGGLDSEISETTTTVVVEAASFNPVNVRKTALK 357 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN- 408 + +++ RFE+G++L + L V+ + L GG A+ ++ +V ++ Sbjct: 358 YNLRSEASSRFEKGINLADINRALDAAVAWMSDLGGGQAAKGTVSPTAVDAKDVVVDISL 417 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + + G + + RI ++LGF V F V++P R D+ KADLVEE+ RIYG Sbjct: 418 DHINHVLGTTLSQDQVTRIFQQLGFGVEVADGLFAVAIPPRRWDIHIKADLVEEVARIYG 477 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 D + S LP T + + Q R R + +L + + + + +++ + F Sbjct: 478 FDNLPST-LPTTTMTIGE-YTPAQKRIRRTRHLLEGLGLNQAITYGLTTEQAATRFKLQP 535 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 E ++ +P++ D + +R +++ GLL N R D AI+E ++ T G + Sbjct: 536 GEPTQVDSPMTKDHAVLRMNMVTGLLDVIKYNQARKETDVAIYEQGRIF---TKTGDQVR 592 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPS 646 I I +G + + + R VD F K ++ + + + F + A S Sbjct: 593 PTEIEYLGGAI--TGHVAAKNWHQAARSVDFFYVKGIVTHLLADYSLAEPVHFAATQAVS 650 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG++ I + V G+ G HP L FE+ LD++ + ++ +K Sbjct: 651 ELHPGQAADILVGTQRV-GFLGRLHPAFEHEQHLPATFV-FELDLDALFAAPRQ----EK 704 Query: 707 VVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + + P V RD+A V + ++ I ++ + DVT+FDV+ G + G+KS Sbjct: 705 IAQPAPKFPAVTRDIALQVADTVTNAEVMQIFQQHGGAYLKDVTLFDVYAGSHMAPGQKS 764 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +A + + T ++++ DR+ + A++R Sbjct: 765 LAYTLTYRRDDQTLTEEEVTQAFDRVKAALESDLGAIIR 803 >gi|160913559|ref|ZP_02076250.1| hypothetical protein EUBDOL_00035 [Eubacterium dolichum DSM 3991] gi|158434111|gb|EDP12400.1| hypothetical protein EUBDOL_00035 [Eubacterium dolichum DSM 3991] Length = 800 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 239/831 (28%), Positives = 421/831 (50%), Gaps = 58/831 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M+ + WL+ ++D +D+S+E++ D LT+ G EVE ++ S I +V+S E +PD D Sbjct: 1 MQISRKWLQQYVDISDLSIEQVADRLTNSGSEVEGIEKMSQGSNLVIGEVVSCEDHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G E Q+VCGAPNV + A G+ +P + +V IRG+ES GM+ Sbjct: 61 HLHVCMVNLGDSVE-QIVCGAPNVAANEKVIVAHVGAKLPGGEIKESV--IRGVESKGML 117 Query: 119 CSEKEL-----MLSDDSASIMEL-PIDAPVG-GRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL LS++S + +EL DAP+G YL L D I+D+ LTPNR+DC+ Sbjct: 118 CSLLELGVDAHHLSEESKNGIELLDKDAPIGCDDPLGYLGLDDEIMDIGLTPNRNDCLAA 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNVA 230 +AL+ G +E++I + + K + ++ C F + ++ + Sbjct: 178 WSMALE---TGAVLEREVHIPNADGASDVGKATKLKVSSETDKCPLFLGKVIGSIKIGPS 234 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILA 289 P W+++ L A G++SI+ +VDI+N V L+ G P H +D + + +TV+ E A Sbjct: 235 PKWIQELLMAAGIKSINNVVDISNIVMLETGQPLHFYDIDALPAQEITVKDHIH-EAYTA 293 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD +YDL +++VI + + IAG++GG + D T +++E A++D + I + + Sbjct: 294 LDGIKYDLCDEDIVITTQNKPIGIAGVMGGDDSKITDETKGIIIEAAIFDHVAIRNTARR 353 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT--ASDICIARNITYKPRKIVFM 407 L + TD+ R+++G++ + V L++ + N Y P +I Sbjct: 354 LNLNTDASIRYQKGIEPMATFKAMDRAVQLLVEYADAKDLEETVQFGSN-HYTPTEIDVN 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + L G D ++ +++L L + + V VPS R D+ + D+ EEI+RI Sbjct: 413 VERINTLLGTDFQEDEVVKVLNNLHLNPQKQDKDIHVIVPSHRTDLIIEEDIAEEIIRIL 472 Query: 468 GVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVL 523 G D++ P+ + Q +L+ +Q R ++ L+ E ++++ +SKE Q+V+ Sbjct: 473 GYDRL---PITMPQTTSTLGSLNKRQKLRRRLRTALSDLGYNEAISYTLVSKEKIDQAVM 529 Query: 524 FGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 GQ E +E+ +P+S D +R+S+LP +L N R++ D A+FE+S+ Y E Sbjct: 530 ---GQCEVVELASPMSEDRRYVRSSILPSMLDCVAYNQARSMKDIALFEISNTYGVHHVE 586 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS--LRF 640 + +AA SG L ++ ++ VD + K LS + + D +RF Sbjct: 587 ERLCVAA-----------SGALHKNRWQKFSVEVDFYTLKG-VLSALLESLGFDGNRVRF 634 Query: 641 ESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 ++ +HP RS + E+ LG GE HP + + + + E+ L+ I Sbjct: 635 KTNQIDTKNFHPYRSAEVYLGKEL-LGMIGEVHPLVCKQYDIERTV-AMEINLE---ILL 689 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-----NVDRLIDDVTVFDVF 753 K + K +S V RD AF+V + + +++ IK N + +I V VFDV+ Sbjct: 690 KNKASKVKFTEVSKYPSVTRDFAFVVKEEVMVADIISSIKKNSRLNKENIIQQVEVFDVY 749 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G+ + +G KS+A+ V Q + T +D +I + ++I+E + + A LR+ Sbjct: 750 TGEHVEKGYKSIALSVTFQSFERTLKDSEITEIYNKILETLKQDVQAELRA 800 >gi|153853726|ref|ZP_01995082.1| hypothetical protein DORLON_01073 [Dorea longicatena DSM 13814] gi|149753476|gb|EDM63407.1| hypothetical protein DORLON_01073 [Dorea longicatena DSM 13814] Length = 806 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 237/839 (28%), Positives = 400/839 (47%), Gaps = 91/839 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGYEKLDADLDKIVIGQIDKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG-----LLGVWAPPGSCIP----ENNMIVNVRK 108 D I+ +++ G + IQ+V GAPNV+ G +L G P E + + K Sbjct: 61 DKLIICQVNVGT-ETIQIVTGAPNVKEGDKVPVVLAGGRVAGGHEPGQRVEGGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS +EL + D I DA VG L L D +++ +T Sbjct: 120 LRGVESDGMMCSIEELGSNRDMYPEAPEYGIYIFDDDAVVGESAIKSLGLDDVVVEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCC 221 NR DC V GIA + AA K + P + E+ IK + + LC + Sbjct: 180 SNRVDCFSVVGIARE-AAATFNKAFYPPVVTPTGNDENAADYIKVTVKNPELCPRYCARI 238 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRR 280 VK ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I + VR Sbjct: 239 VKNIKIGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIEGKEIVVRT 298 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 A GEK LD QE ++ ++I + IAGI+GG+++ D+ +L E A +D Sbjct: 299 AEKGEKFTTLDGQEREMDESVLMICDGKKSIGIAGIMGGENSMITDDVQTMLFEAACFDG 358 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITY 399 NI +S K +G+ TD+ +FE+G+D + LI + G + + Sbjct: 359 TNIRKSSKKIGLRTDASGKFEKGLDPNNAEAAIDRACQLIEEMGAGEVVGGMVDVYSKKK 418 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKA 457 +P ++ F ++ +L G D+ E+ + +++ E+D+ EV P++R D+ A Sbjct: 419 EPVRVPFDAEKINKLLGTDISKEEMIGYFKKIDL----EFDEETSEVIAPTFRHDLFRIA 474 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DL EE+ R YG D I + LP + + LS + + + + + + +SF S Sbjct: 475 DLAEEVARFYGYDNIPT-TLPSGEATTGK-LSFKLRVEQVARDIAEFCGFSQGMTYSFES 532 Query: 518 ---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E S L ++ + I+NP+ D S MRTS L G+L + N +R D Sbjct: 533 PKVFDKLLIPEDSDL----RKAIPIMNPLGEDYSIMRTSSLNGMLTSLATNYNRRNKDVK 588 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFDA 621 ++E++++Y P+ ++ +ER +F D F Sbjct: 589 LYELANIY---LPKALP-------------------LTELPDERVQFTLGMYGEGDFFTM 626 Query: 622 KADALSVIEPFVSLDSL----RFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 K V+E F L +++ A S+ HPGR I +V+GY GE HP + D Sbjct: 627 KG----VVEEFFDKVGLHKKEKYDPNAGKSFLHPGRQANIIYDG-VVVGYLGEVHPEVAD 681 Query: 677 FFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 +G+ G Y+ I + + + T +K ++ V RD++ ++ + I G + Sbjct: 682 NYGI-----GTRAYIAVIDMPEIVARATFDRKYTGIAKFPAVTRDISMVMPKEILVGQIE 736 Query: 735 NIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 ++I++ ++ ++FD+++G + G KSVA ++ + T D D+ MDRI++ Sbjct: 737 DVIESKGGEYLESYSLFDIYEGAQIKTGFKSVAYSIVFRAKDKTLEDADVSAAMDRILK 795 >gi|312873018|ref|ZP_07733078.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] gi|311091540|gb|EFQ49924.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 2062A-h1] Length = 804 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 226/825 (27%), Positives = 409/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTQVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGKDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDSNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG +++D + + +D + K ++ IE + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYADNWQHLDQNIDFYYVKGQLTNIFIELGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|149280604|ref|ZP_01886719.1| phenylalanyl-tRNA synthetase beta subunit [Pedobacter sp. BAL39] gi|149228649|gb|EDM34053.1| phenylalanyl-tRNA synthetase beta subunit [Pedobacter sp. BAL39] Length = 799 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 244/842 (28%), Positives = 387/842 (45%), Gaps = 83/842 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK L TD + + LT IGLEVE V+ +A L I VLS ++P Sbjct: 1 MKISYNWLKQFLKTDQTPAALSLILTDIGLEVESVETVQAVAGGLEGLVIGHVLSCVQHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + ++ G + +Q+VCGAPNV G V A G+ + N +N KIRG Sbjct: 61 NADRLRVTTVNVGAAENLQIVCGAPNVAEGQKVVVAVVGTTVHPNEGEPFKINKSKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDCIGV 171 S GM+C+E E+ L A IM LP D +G Y L D + ++ LTPNR+D Sbjct: 121 VSEGMICAEDEIGLGGSHAGIMVLPEDTQIGLAAKTYFNLEDDYLFEIGLTPNRADAASH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A DL A L ++S +E I + D+ C ++ + GV+ +P Sbjct: 181 LGVARDLAAYLRLPLTLPDVSAFKGAEGNG-NINVQVMDTEACPRYSSVSITGVKVATSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++ +LK +G+R I+ +VDITNYV + G P H FD I + V++ G + L Sbjct: 240 EWLQNQLKVIGIRPINNIVDITNYVLHELGQPLHAFDQDLIKGGQVLVKKCAEGTPFVTL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D LS ++++I IAG+ GG H+G + T++V +E A +D ++ ++ K Sbjct: 300 DGVTRTLSSEDLMICDAEEPMCIAGVFGGIHSGVTEGTSNVFLESAYFDAKSVRKTSKRF 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNS 409 G+ TD+ +RFERG D + I L+ LI + GGT +S + P + Sbjct: 360 GLKTDASFRFERGTDPEMTIFALQRAALLIQEIAGGTISSAVSDIYPSPVAPFDVEVNYD 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYG 468 + RL G +P + IL LG V+ E + + VPS++ DV + D+ EE+LRI+G Sbjct: 420 NINRLIGATIPNTEIKEILVALGIKVVAETEAGLSLQVPSYKVDVTREVDITEEVLRIHG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSL---QQSRTRYVKRVLA----SRAMMEVVNWSFISKEQS 521 + I + K N SL Q+ + V+A + +E+ W S +S Sbjct: 480 YNNIA--------IPTKVNASLSYGQKPNPEQTQHVIADMLTANGFLEI--WCN-SLTKS 528 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE--ND 579 +EILNP+S +++ MR SLL L++ N +R D +E Y ND Sbjct: 529 AYSKNPAEAVEILNPLSVELNVMRQSLLMPALESVAYNQNRRTTDVKFYEFGKTYHLIND 588 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF------- 632 KY + + + SG +++ ++ V + KA +I Sbjct: 589 -----KY----VERPRLLVLLSGNQAAEQWNQKVTPVSFYHLKAVVDGIIGRMGIGNYQS 639 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG----------YFGEFHPNILDFFGLSN 682 L++ F G Y+ G I+ A + ++ +F +L Sbjct: 640 EELNNEDFAYGLK--YYRGDKAIVSFGAATLADRKKADVDRDVFYADFDWALL------- 690 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVD 741 + I +K + K+V S V+RDL+ +VD + L I K Sbjct: 691 -----------LDIVRKNKIVNKEV---SKYPSVRRDLSMLVDTEVTFDQLKTIAYKTEK 736 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +LI ++ VFDV+ G L EGKKS A+ + + T D I +M +I+ N+ + A Sbjct: 737 KLIKNIQVFDVYVGDKLPEGKKSYALNFTLLDEEQTLTDKQIDSVMQKIIYNLAQHAKAE 796 Query: 802 LR 803 +R Sbjct: 797 IR 798 >gi|50954376|ref|YP_061664.1| phenylalanyl-tRNA synthetase, beta subunit [Leifsonia xyli subsp. xyli str. CTCB07] gi|66773901|sp|Q6AGD6|SYFB_LEIXX RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|50950858|gb|AAT88559.1| phenylalanyl-tRNA synthetase, beta subunit [Leifsonia xyli subsp. xyli str. CTCB07] Length = 847 Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 236/831 (28%), Positives = 380/831 (45%), Gaps = 62/831 (7%) Query: 1 MKFTLSWLKDHLDTD--VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ LSWL +++D + + ++ L S+GLE E V P + +V+ P Sbjct: 1 MRVPLSWLGEYVDLEPGTTPAEVHAALVSVGLEEEGVHTFGIEGPVVVGEVIDFVEEPQS 60 Query: 59 DCAILR------------IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE----NNM 102 + +R G +VCGA N G V PG+ +P Sbjct: 61 NGKTIRWCQVRVAAEGQKAADGGADVRGIVCGAGNFFPGDKVVVTLPGAALPGPAPLTPF 120 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP---IDAPVGGRLSDYLELSDPIIDV 159 ++ RK G S GM+ S +EL L DD I+ L +D VG L L D ++V Sbjct: 121 VIAARKTYGHVSDGMIASARELGLGDDHDGILRLSTLGLDPEVGADAVSLLGLDDTAVEV 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLK---EINISCPLSSE--SIPLEIKFDLDDSSLC 214 ++TP+R +RGIA + A + E S P + S+ +E + + D Sbjct: 181 NVTPDRGYAFSIRGIAREYAHATGAAFRDPAEAVASPPPHAHGFSVAVEDRAPIRDRVGA 240 Query: 215 KGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 F V+ V P WM RLK G+RSIS +VDITNYV L+ G P+H +D R+S Sbjct: 241 SVFVTRVVRDVDATRPTPPWMVARLKLAGIRSISLVVDITNYVMLELGQPTHGYDLDRLS 300 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + VRRA +GE ++ LD+Q L ++++I D +AG++GG T +VLV Sbjct: 301 GGIVVRRAHAGETLVTLDDQTRALHAEDLLITDDSGAIGLAGVMGGASTEIGAGTRNVLV 360 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +DP++IAR+ + + +++ RFERGVD + + +V L+ L GGTA + Sbjct: 361 EAANFDPVSIARTARRHKLPSEASKRFERGVDPRVAVAAAARVVQLLEQLAGGTADGLGS 420 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 + T I + + L G+ ++ L +G SV V P+WR D+ Sbjct: 421 LLDETADAEPIRLPDDYIPNLIGVAFTDDEVRGALAEIGGSVSDTEGALLVVPPTWRPDL 480 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 +K+DL EE+ RI G D+I S LP+ R LS Q+ R V + LA EV+ + Sbjct: 481 RDKSDLAEEVARIVGFDRIPSV-LPVAP--PGRGLSRAQTLRRAVAQTLADNGATEVLAF 537 Query: 514 SFISKEQSVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F+ Q+ LFG GG +++ NP+ A + +RTSLLPGLL RN+ R + D ++ Sbjct: 538 PFVGAAQNDLFGSPEPGGVPAVKLANPLDATAAYLRTSLLPGLLGIAKRNLARGLVDLSV 597 Query: 570 FEVSHVYENDTPEGQKYMAAGI----RKGSSGIEG---------SGRLWSDKSEERCRFV 616 +E V+ G + + G R+ +G+ +G + ++ Sbjct: 598 YETGTVFLPGAALGSETLPPGAALPSRETLAGLNAGIPDQPRHLAGVVLGHTVRKQPGQP 657 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAP--SWYHPGRSG--IIKTSAEIVLGYFGEFHP 672 + ADAL++++ + + E HPGR+ + VLGY GE P Sbjct: 658 AVAAGLADALAMVDQAAAAVGVAVEPVQSRHQALHPGRTAQLVAGDGVRTVLGYAGELSP 717 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 + L + FE+ LD++ + + +DL+ +V +PAG Sbjct: 718 ALAAELDLPRVVAVFELDLDALIAVAPAEIVAGTIAGFPA---ATQDLSLVVGDEVPAGE 774 Query: 733 LVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 ++ ++ L++D+ + D ++G L + KS+ + FR DD Sbjct: 775 VLRAVREGAGALLEDIRLVDDYRGTGLPDSSKSLTFAL-------RFRADD 818 >gi|158320998|ref|YP_001513505.1| phenylalanyl-tRNA synthetase subunit beta [Alkaliphilus oremlandii OhILAs] gi|158141197|gb|ABW19509.1| phenylalanyl-tRNA synthetase, beta subunit [Alkaliphilus oremlandii OhILAs] Length = 798 Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 229/835 (27%), Positives = 401/835 (48%), Gaps = 71/835 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L+WLKD+++ + ++ D +T G VE ++ E + + + S+ ++PD D Sbjct: 2 MYVSLNWLKDYVNVHIDTAELADKMTMSGSMVEGIEVLGEDIKNVVVGHIDSIRQHPDAD 61 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ Q +Q+V GA N+ G A G+ +P + + K+RG S GM+ Sbjct: 62 KLVICQVNIGE-QILQIVTGATNISEGDYIPVATHGALLP-GGVKIKKGKLRGEVSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDA--------PVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS EL + A I E D P+G +++ L L D +++ +T NR DC+ Sbjct: 120 CSPDELGIP--KAVIPEKHKDGIWILDQAYPLGKDITEVLGLKDQVVEFEITSNRPDCLS 177 Query: 171 VRGIALDLVAAGLGK-LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 + G+A + VAA LG+ ++ I E I +++D+ C + VK V+ Sbjct: 178 MIGMARE-VAATLGEAVQYPKIEVKEIEEKTSDHIAVEIEDTEGCSRYVARVVKNVKIEP 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P WM+QRL + G+R I+ +VDITNYV L+ G P H FD S ++ + + V++A E + Sbjct: 237 SPQWMQQRLMSAGIRPINNMVDITNYVMLEYGQPLHAFDLSYVAGNKIIVKKAKEDEVFV 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E L VIA + + +IAG++GG+ + + T +L+E A ++ + + K Sbjct: 297 TLDGMERKLKSSMTVIADNDKSLAIAGVMGGEQSEVTEGTKTILIESAHFNNNSTRLTSK 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI--------ARNITYK 400 L + T++ RFE+GVD + LI+ L G + + T + Sbjct: 357 QLALRTEASARFEKGVDPNITRIAADRVCQLIVELNAGEVLEGAVDVYPNEVKPYTTTIR 416 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 PRKI L G ++ D + I +L + D EV+VP++R D+ +AD Sbjct: 417 PRKI-------NALLGTNISNADMVEIFRKLEIKAVDYNDTMEVTVPTYRMDLVMEADFA 469 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV-----KRVLASRAMMEVVNWSF 515 EE+ RI+G D+I P T K N+++ + + +++L E++ +SF Sbjct: 470 EEVGRIFGYDRI-----PATMA--KGNIAVGGKPEKQIIEDSTRKLLNGMGFNEILTYSF 522 Query: 516 ISKEQSVLFGGGQ-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 +S + + G+ +++LNP+ + S MRTSLLP +L RN +R + + F Sbjct: 523 VSPKSIEMINLGEDSIKRNMIKLLNPLGDETSVMRTSLLPNILDVAARNNNRKVEEMRAF 582 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 E+ ++ T E + + I + G ++ K +A L IE Sbjct: 583 EIGQIFIPKT-EALQELPVEIPNLVMAMYGKEDFFTLKG--------FVEALLKGLG-IE 632 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + E PS YHPGR I + + G GE HP +++ + LS E+ Sbjct: 633 GY----EFTVERNHPS-YHPGRCANIVIEGKFI-GVLGELHPMVVENYDLSQRCYCAEID 686 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVT 748 ++ T +++ +P + RD A +V + + + +IIKN +L++ Sbjct: 687 FGAVI----ALTNMERIYQPLPKYPSITRDFAVVVKETVLVKEIEDIIKNQGGKLLESFK 742 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV+QG + EG KS+A + + + T D+++ +RI+ + +K LR Sbjct: 743 LFDVYQGSQIKEGFKSIAYTITYRNKERTLTDEEVNASHNRILAEIREKLEGSLR 797 >gi|78212869|ref|YP_381648.1| phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. CC9605] gi|93140716|sp|Q3AJY9|SYFB_SYNSC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78197328|gb|ABB35093.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9605] Length = 807 Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 234/846 (27%), Positives = 411/846 (48%), Gaps = 81/846 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ ++SWLK + + S++ + + L+ G EV+ VD+ A + +V VL E++P+ D Sbjct: 1 MRVSISWLKQLVQVNESVDDLSERLSMAGFEVDDVDDLSARAQGVVVGNVLEREKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G IQ+VCGA NVR G+ A G+ +P + + ++RG+ S GM+ Sbjct: 61 KLSVCKVDVGAQAPIQIVCGASNVRSGIHVPVAMVGATLPAVGLTIKAGELRGVASNGMI 120 Query: 119 CSEKELMLSDDSASIM-------ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL L++ S I LP P G ++ L L D ++++++T NR D + + Sbjct: 121 CSLTELGLTEQSDGIAILDELDESLP---PNGSPVAPLLGLDDTVLELAITANRPDGLSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC-----VKGVR 226 GIA ++ A G L S+P E+ D S L C ++GV Sbjct: 178 VGIAREVAALTGGSL------------SLP-ELDLDPSTSPLTTELDGCFYTITRIEGVD 224 Query: 227 -NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------L 276 + +P W++QRL+ G+ S++A+VD+TN V L++G P H FDA + + Sbjct: 225 GSKPSPTWLQQRLERGGVNSVNAVVDVTNLVMLEQGQPLHAFDADALEQLTGQPVDAKSF 284 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 VR A GE + LD+Q+ L V+ R ++AG++G +G +T ++ +E A Sbjct: 285 AVRSARDGEIFVGLDDQKRTLDSRVQVVTCHDRPVAVAGVMGSLESGVTASTRNIWLESA 344 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 L+ P + S + LG+ TD+ RFE+G+ ++ +P +L+ + S + + Sbjct: 345 LFAPPRVRHSARALGLRTDASSRFEKGLPVEMTLPCSARASALLSQEFSCSESGRWVGGS 404 Query: 397 ITYKPRKIVFMNSEVKRLSGI-----------DVPIEDSLRILERLGFSVIGEYDKFEV- 444 + ++ S + +L G D IE+ L LG + +EV Sbjct: 405 GPAEAGPVLLRRSALHQLLGPLDAADGPEDLDDTSIENCLTA---LGCQLSAHEQGWEVM 461 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 + PS RQD++ + DL+EE+ R+ G D+ + P PL + L+ +Q R ++++ Sbjct: 462 APPSRRQDLQREVDLIEEVARLVGFDRFGAHLPDPL----EPGALTPRQQAERRLRQLFC 517 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + + EV S + + ++ + I NP+ AD S++RT+L L+ RN+ + Sbjct: 518 ATGLQEVTTLSLVPASEQ------EQRIAISNPLLADTSHLRTNLWEEHLQICVRNLKAS 571 Query: 564 IADFAIFEVSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 ++FE+ + Y + +PE QK + AG+ I G RL + + + + D F A Sbjct: 572 QRGCSVFEIGNTY-SGSPEAVSQKAVLAGV------ICGDRRLSTWATSGKPQAPDYFQA 624 Query: 622 KADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 + V+E + L R A HPGR+ + LG FG+ HP + + L Sbjct: 625 RGVLTRVMEALQLELSDRRLTDDA--RLHPGRAATLVLEGR-PLGCFGQLHPAMAEELDL 681 Query: 681 SNPICGFEVYLDSIPISQKKRTK-TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 FE+ L + + + + T ++ +RDLA IVD+ A L+ I+ Sbjct: 682 PEATYLFELDLARLLDAATRSNRWTPSFKPYPTVPFSERDLAVIVDRSSAATDLIQAIRK 741 Query: 740 VDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + L++ V + D F+G+ LG+ K S A ++ + +T DD I+ + D++ + K+ Sbjct: 742 AGKPLLEQVELVDRFEGEQLGDNKVSQAFRLRYRGKNETLTDDKIQPVHDKVRAALSKQF 801 Query: 799 NAVLRS 804 A LRS Sbjct: 802 QAELRS 807 >gi|309808374|ref|ZP_07702276.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] gi|308168381|gb|EFO70497.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 01V1-a] Length = 804 Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 226/825 (27%), Positives = 409/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGKDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDYDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG +++D + + +D + K ++ IE + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYADNWQHLDQNIDFYYVKGQLTNIFIELGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|15616750|ref|NP_239962.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] gi|11135201|sp|P57230|SYFB_BUCAI RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|25293344|pir||H84944 phenylalanine-tRNA ligase (EC 6.1.1.20) beta chain [imported] - Buchnera sp. (strain APS) gi|10038813|dbj|BAB12848.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. APS (Acyrthosiphon pisum)] Length = 795 Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 226/821 (27%), Positives = 393/821 (47%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-RNPDL 58 MKF+ WL++ +D VS + + + +++ G+EVE V+N + + K++ N Sbjct: 1 MKFSEKWLREWIDPQVSSKILHEQISNSGIEVEHVENFKSEFHGVVVGKIVQCTFHNESN 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +L++D GK + + ++CGA N R G+ A G+ +P+N + +N + ++G S GM+ Sbjct: 61 NLKVLKVDIGKKKLLNIICGASNCRNGIKVAVATVGATLPKN-ITINKKILKGAWSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L + I+E P + VG + DY L D II VS+T NR D + + G++ ++ Sbjct: 120 CSFFELGLFLNDNKIIEFPKETLVGINVYDYFLLEDNIIKVSITSNRPDGLSILGLSRNI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A + ++ IS PL + +P +I D+ C F ++ + NV P W Sbjct: 180 AA-----INDLRIS-PLKNRLVPAVIQKKINIDIQADKECMNFFGRIIENININVDTPFW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L + S + + +I +YV ++ G P ++ DA I+D + VR A E + +N Sbjct: 234 MKKKLFFSNVLSENIITNIIHYVLIELGQPLNILDADNINDSIIVRMARHEEDLFLKNNI 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ + +V + +I S+ G I D NT ++ + L + I+ K + + Sbjct: 294 KISLNENILVFSDSNKILSLPGNINSNIVDVDKNTKNIFLSSYLINRKYISYIIKKMNMN 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI----CIARNITYKPRKIVFMNS 409 T Y + GVD +++ LIL +CGG I C + +K I + Sbjct: 354 TVLEYHY-YGVDPFLQNYAIEYATDLILKICGGVPGPINEKKCNFQ--IHKNNTIRLHHE 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G + +IL RL + + + ++V PSWR D+ + D++ +ILRIY Sbjct: 411 RLNKIIGFFIDTSVISKILYRLDYQLKFQKTFWDVISPSWRFDILIEEDVIGDILRIYEY 470 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + PL K+N L S + +L ++ EV+N+ FI + L + Sbjct: 471 NNVHLIPLKEFLNCSKKN-ELTDSLLKKSAVILINQGYHEVINYGFIDPKIQNLIFPNEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----Q 584 L + NPIS DMS MR SL PGLLK N +R IFE + D E + Sbjct: 530 NLLLSNPISQDMSCMRLSLWPGLLKNISYNKNRQQKSIRIFESGLCFSIDKRENLGIRQE 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 ++AA I SG + R +D +D K D S++E L+ + F Sbjct: 590 IFLAAAI---------SGNYIKENWYYNIRKMDFYDLKGDLESILESICQLNEIEFRRKK 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HP +S I ++ G G P + +S+ FE+ L++ K Sbjct: 641 IHGLHPEQSASIYFRNYLI-GSIGAIDPRLEKALNVSSTTFLFEISLNNFS-----DIKP 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEGK 762 KV +S V+RD+A ++ + I A ++ K ++ + ++ +FD++ K K Sbjct: 695 LKVEEISKFPTVRRDIAILISEEIAAYNVIEQCKIFFINEKV-EINLFDIYAYKESHNHK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+ I + Q K TF+D++I +++D + + KK AVLR Sbjct: 754 KSLGISFIFQNKKRTFQDNEINLMIDDCIGVLQKKFQAVLR 794 >gi|152967107|ref|YP_001362891.1| phenylalanyl-tRNA synthetase, beta subunit [Kineococcus radiotolerans SRS30216] gi|151361624|gb|ABS04627.1| phenylalanyl-tRNA synthetase, beta subunit [Kineococcus radiotolerans SRS30216] Length = 854 Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 245/872 (28%), Positives = 388/872 (44%), Gaps = 86/872 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKI--CDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ LSWL +H+D + + L +GLE E + P + +VL + + P Sbjct: 1 MRVPLSWLAEHVDLEPGARGVDVAAALVRVGLEEEGLHTAGITGPLVVGRVLDLAKEPQK 60 Query: 59 DCAIL---RIDTG-KHQEIQ----VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 + + +D G +H + +VCGA N G L V A PG+ +P + + RK Sbjct: 61 NGKTINWCHVDVGPEHNGPEGNRGIVCGAHNFVEGDLVVVALPGAVLP-GDFAIAARKTY 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMELP-----IDAPVGGRLSDYLELSDPIIDVSLTPNR 165 G S GM+CS KEL L D I+ L ++ G L L++ ++V++TP+R Sbjct: 120 GHVSDGMICSSKELGLGTDHDGIIVLSQFLPGVEVTPGQDALALLGLAEETVEVNVTPDR 179 Query: 166 SDCIGVRGIALDLVAAGLGKLKEI-----NISCPL-SSESIPLEIKFD--LDDSSLCKGF 217 C +RG+A + + E+ + PL S P+ + D L + C F Sbjct: 180 GYCFSIRGVAREYAHGTRRPVAEVLRDPVAVDVPLPSGPGYPVRLADDAPLRGAVGCDRF 239 Query: 218 AMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 V+GV +P ++ RL+ G+R IS VD+TNYV L G P H +D + L Sbjct: 240 VARVVRGVDPTRPSPRFVADRLRQAGMRPISLAVDVTNYVMLATGQPLHAYDLDTLQGEL 299 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIA-------SDGRIQSIAGIIGGKHAGCDDNTT 329 VRRA +GE++ LD L P++++I S R+ SIAG++GG TT Sbjct: 300 VVRRARAGEELTTLDGVRRTLHPEDLLITDEVPGDPSTSRVLSIAGVMGGASTEVSATTT 359 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-- 387 VL+E A + + +ARS + + +++ R ERG D + V L++ GGT Sbjct: 360 TVLLEAAHFAAVGVARSARRHRVPSEAAKRNERGTDPTICAQAAELAVRLLVEHGGGTPD 419 Query: 388 --ASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 A+D+ R + M++ +R+ G+ + L +G V E V Sbjct: 420 PGATDVG-----GPAARTAITMDAGFPERVVGVRYDAGQVVAALTEIGCEVAVEGTSLTV 474 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 P WR D+ + LVEE+ R+ G D+I S L L+ Q R + R LA Sbjct: 475 LPPPWRPDLVGRVHLVEEVARLSGYDEIPSV---LPPAPAGTGLTPAQRARRSLARALAD 531 Query: 505 RAMMEVVNWSFISK----EQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRN 559 +EV+++ F++ Q + G +R+ L + NP+S +RTSLL L++ RN Sbjct: 532 DGFVEVLSYPFVAPGVHDAQRIPDGDARRDALRLANPLSEQQPLLRTSLLDSLVEPVRRN 591 Query: 560 VDRAIADFAIFEVSHVYENDTPEG-------------------------QKYMAAGIRKG 594 V R + D A+FEV V G Q AG+ G Sbjct: 592 VSRGLRDLAVFEVGSVTRPRPATGPAEVLGVEGRPSDEELDRLRAAVPPQPLHVAGVLTG 651 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDA-KADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 + G ++ E + D DA + A SV P E+ + +HPGR Sbjct: 652 TRRRPGVVGDSFARTAEPAGWADAIDAARTVAASVGVPVA------VEAAERAPWHPGRC 705 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 I T +GY GE HP + L FE+ LD + + + +V LS Sbjct: 706 ARITTRQGHTVGYAGELHPGAVAALELPARAAAFELDLD---VLLDQVGASPQVDSLSGY 762 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +D+A +VD +PA ++ +++ L++DV +FDV+ G +GEG+KS+A + + Sbjct: 763 PAATQDVALVVDAAVPAASVEAALRSGAGPLLEDVHLFDVYTGAQVGEGRKSLAYALRFR 822 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T ++ D V V +T AV R+ Sbjct: 823 ARDRTLTAEEASGARDAAVAEAVSRTGAVQRA 854 >gi|219681505|ref|YP_002467890.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] gi|257471186|ref|ZP_05635185.1| phenylalanyl-tRNA synthetase subunit beta [Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)] gi|219624348|gb|ACL30503.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. 5A (Acyrthosiphon pisum)] Length = 795 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 225/821 (27%), Positives = 393/821 (47%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-RNPDL 58 MKF+ WL++ +D V + + + +++ G+EVE V+N + + K++ N Sbjct: 1 MKFSEKWLREWIDPQVGSKILHEQISNSGIEVEHVENFKSEFHGVVVGKIVQCTFHNESN 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +L++D GK + + ++CGA N R G+ A G+ +P+N + +N + ++G S GM+ Sbjct: 61 NLKVLKVDIGKKKLLNIICGASNCRNGIKVAVATVGATLPKN-ITINKKLLKGAWSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L + I+E P + VG + DY L D II VS+T NR D + + G++ ++ Sbjct: 120 CSFFELGLFLNDNKIIEFPKETLVGINVYDYFLLEDNIIKVSITSNRPDGLSILGLSRNI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A + ++ IS PL + +P +I D+ C F ++ + NV P W Sbjct: 180 AA-----INDLRIS-PLKNRLVPAVIQKKINIDIQADKECMNFFGRIIENININVDTPFW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L + S + + +I +YV ++ G P ++ DA I+D + VR A E + +N Sbjct: 234 MKKKLFFSNVLSENIITNIIHYVLIELGQPLNILDADNINDSIIVRMARHEEDLFLKNNI 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ + +V + +I S+ G I D NT ++ + +L + I+ K + + Sbjct: 294 KISLNENILVFSDSNKILSLPGNINSNIVDVDKNTKNIFLSSSLINRKYISYIIKKMNMN 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI----CIARNITYKPRKIVFMNS 409 T Y + GVD +++ LIL +CGG I C + +K I + Sbjct: 354 TVLEYHY-YGVDPFLQNYAIEYATDLILKICGGVPGPINGKKCNFQ--IHKNNTIRLHHE 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G + +IL RL + + + ++V PSWR D+ + D++ +ILRIY Sbjct: 411 RLNKIIGFFIDTSVISKILYRLDYQLKFQKTFWDVISPSWRFDILIEEDVIGDILRIYEY 470 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + PL K+N L S + +L ++ EV+N+ FI + L + Sbjct: 471 NNVHLIPLKEFLNCSKKN-ELTDSLLKKSAVILINQGYHEVINYGFIDPKIQNLIFPNEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----Q 584 L + NPIS DMS MR SL PGLLK N +R IFE + D E + Sbjct: 530 NLLLSNPISQDMSCMRLSLWPGLLKNISYNKNRQQKSIRIFESGLCFSIDKRENLGIRQE 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 ++AA I SG + R +D +D K D S++E L+ + F Sbjct: 590 IFLAAAI---------SGNYIKENWYYNIRKMDFYDLKGDLESILESICQLNEIEFRRKK 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HP +S I ++ G G P + +S+ FE+ L++ K Sbjct: 641 IHGLHPEQSASIYFRNYLI-GSIGAIDPRLEKALNVSSTTFLFEISLNNFS-----DIKP 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEGK 762 KV +S V+RD+A ++ + I A ++ K ++ + ++ +FD++ K K Sbjct: 695 LKVEEISKFPTVRRDIAILISEEIAAYNVIEQCKIFFINEKV-EINLFDIYSYKESHNHK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+ I + Q K TF+D++I +++D + + KK AVLR Sbjct: 754 KSLGISFIFQNKKRTFQDNEINLMIDDCIGVLQKKFQAVLR 794 >gi|253578404|ref|ZP_04855676.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850722|gb|EES78680.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 805 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 241/840 (28%), Positives = 399/840 (47%), Gaps = 88/840 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKMYVPDLDVTAQEYTDAMTLTGTKVEGFEKLDADLDKIVIGQIEKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPGSCIPENNMIVNVRK--I 109 D I+ +++ G + +Q+V GAPNV+ G L G G + + ++K + Sbjct: 61 DKLIICQVNIGT-ETVQIVTGAPNVKEGDKVPVVLDGGRVAGGHDGKKTPGGIEIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RGI+S GMMCS +EL + + I P DA VG L L D + + +T Sbjct: 120 RGIDSYGMMCSIEELGSTREMYPEAPEYGIYIFPEDAVVGESAIKALGLDDVVFEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC GV GIA + A K + C + E +K ++D LC + VK Sbjct: 180 NRVDCYGVLGIAREAAATFNEKFCPPVVECKGNDEKASDYVKVTVEDPKLCPRYCARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 V+ +P WM++ L + G+R I+ LVDITNYV + G P H +D RI+ + VRRA Sbjct: 240 NVKIGPSPKWMQRCLASNGIRPINNLVDITNYVMEEFGQPMHAYDLDRIAGKEIVVRRAE 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 + EK + LD QE + D V++ DG + IAGI+GG+++ D+ VL E A +D Sbjct: 300 NDEKFVTLDGQERTMD-DQVLMICDGEKAVGIAGIMGGENSMITDDVKTVLFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNI 397 NI S K +G+ TD+ +FE+G+D + L+ L G DIC N Sbjct: 359 NIRLSSKRIGLRTDASGKFEKGLDPNNAQAAIDRACQLMEELGAGEVVGGMVDIC---NE 415 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEE 455 +P ++ F ++ L G D+ E+ L L ++ + YD+ E+ P++RQD+ Sbjct: 416 VREPSRVPFKPEKINALLGTDLTPEEMLAYLAKVELT----YDEKTNEIVAPTFRQDIHY 471 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWS 514 AD+ EE+ R +G D+I P L E + R V R +A E + +S Sbjct: 472 VADVAEEVARFFGYDKI---PTTLPTGEATTGKLPFKLRIEAVARDIAEYCGFSEGMTYS 528 Query: 515 FISKE---------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 F S + S L G + I NP+ D S MRT+ L G+L + N +R Sbjct: 529 FESPKVFDKLRLPADSKLRQG----IVISNPLGEDYSVMRTTTLNGMLSSLATNYNRRNK 584 Query: 566 DFAIFEVSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 D ++E+ +VY + P+ + + G+ G+G D F Sbjct: 585 DVRLYELGNVYRPKALPLTELPDERMHFTLGMY-------GNG--------------DFF 623 Query: 620 DAKADALSVIEPFVSLDSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 D K E D + ++ + ++ HPGR + ++V GY GE HP + D + Sbjct: 624 DMKGVCEEFFEKVGMRDKVDYDPNSGKTYLHPGRQANMVYDGKVV-GYLGEVHPLVADTY 682 Query: 679 GLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 G+ G + Y+ I I + + K ++ V RDL+ +V + + AG + +I Sbjct: 683 GI-----GDKAYVAVIDILTVLEFASFNHKYTGIAKYPAVTRDLSMVVPKTVLAGQIEHI 737 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + + ++++ +FD+++G + G KS+A ++ + T + +I M +I+ + Sbjct: 738 LTQRGGKILESYQLFDIYEGNQIKGGYKSMAYSLVFRHHDKTLEESEITAAMKKILNGLT 797 >gi|153812964|ref|ZP_01965632.1| hypothetical protein RUMOBE_03371 [Ruminococcus obeum ATCC 29174] gi|149830911|gb|EDM86001.1| hypothetical protein RUMOBE_03371 [Ruminococcus obeum ATCC 29174] Length = 801 Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 244/839 (29%), Positives = 395/839 (47%), Gaps = 94/839 (11%) Query: 5 LSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLDCAI 62 +SW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD D I Sbjct: 1 MSWIKMYVPDLDVTAQEYTDAMTLSGTKVEGFEKLDADLDKIVIGQIEKIEKHPDADKLI 60 Query: 63 L-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRKIRGI 112 + +++ G + +Q+V GAPNV+ G L G G P + + K+RG+ Sbjct: 61 ICQVNIGT-ETVQIVTGAPNVKEGDKVPVVLDGGRVAGGHDGQKTP-GGIKIKKGKLRGV 118 Query: 113 ESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 ES GMMCS +EL + + I P DA VG L L D +I+ +T NR Sbjct: 119 ESFGMMCSIEELGSTREMYPEAPEYGIYIFPEDAVVGESAIKALGLDDVVIEYEITSNRV 178 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 DC GV GIA + A K I + E +K ++D LC + VK V+ Sbjct: 179 DCYGVLGIAREAAATFDKKFVPPVIKETGNDEKASDYVKVTVEDPELCPRYTARVVKNVK 238 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P WM++ L + G+R I+ LVDITNYV + G P H +D I + VRRA +GE Sbjct: 239 IGPSPKWMQRCLASNGIRPINNLVDITNYVMEEYGQPMHAYDLDTIEGREIVVRRAKAGE 298 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 K + LD+QE ++ D V++ DG+ IAGI+GG+++ DN VL E A ++ NI Sbjct: 299 KFVTLDDQEREMD-DQVLMICDGKKAVGIAGIMGGENSMITDNVHTVLFEAACFNGTNIR 357 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK 400 S K +G+ TD+ +FE+G+D + L+ L G DIC N + Sbjct: 358 LSSKRIGLRTDASGKFEKGLDPNNAKAAIDRACQLMEELGAGEVVGGCVDIC---NEVRE 414 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P ++ F + L G D+ E+ L L ++ ++ E + E+ P++RQD+ AD+ Sbjct: 415 PSRVPFEPERINALLGTDLTKEEMLAYLAKVELTLDPETN--EIVAPTFRQDIHCMADVA 472 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFIS-- 517 EE+ R +G D+I P L E + R V R +A E + +SF S Sbjct: 473 EEVARFFGYDKI---PTTLPNGEATTGKLPFKLRIENVARDIAEYCGFSEGMTYSFESPK 529 Query: 518 -------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 E S L ++ + I NP+ D S MRT+ L G+L + N +R ++ Sbjct: 530 VFDKLRIPENSDL----RKVITISNPLGEDYSIMRTTTLNGMLSSLATNYNRRNKAVRLY 585 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 E+ VY + P+ + + G+ G+G D FD K Sbjct: 586 EIGKVYLPKALPLTELPDERTHFTLGMY-------GAG--------------DFFDMKG- 623 Query: 625 ALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 VIE F ++ + ++ HPGR I ++V GY GE HP + +G Sbjct: 624 ---VIEEFFEKSGMKKKVHYTPDSNKTYLHPGRQANISYEGKVV-GYLGEVHPLVAGNYG 679 Query: 680 LSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 + G Y+ I I + K ++ V RDL+ +V +HI AG + +++ Sbjct: 680 I-----GERTYVAVIDIQDILEFCGFNHKFTGIAKYPAVTRDLSMVVPKHILAGQIEDVL 734 Query: 738 KNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + R+++ +FD+++G + G KS+A V+ + + T + +I M +I+ + Sbjct: 735 EQRGGRILESYQLFDIYEGAQIKPGYKSMAYSVVFRDHEKTLEEAEITATMKKILNGLT 793 >gi|237785427|ref|YP_002906132.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium kroppenstedtii DSM 44385] gi|237758339|gb|ACR17589.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium kroppenstedtii DSM 44385] Length = 848 Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 243/878 (27%), Positives = 410/878 (46%), Gaps = 104/878 (11%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M W+ + LD V+ E++ +G E E + E P + +V +E Sbjct: 1 MFMPQHWITEILDYANPGWSVTPEELDSAYVRVGFETEGYETIPETTGPLVLGRVEKIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + E+Q ++CGA N G + V A PG+ +P + ++ RK Sbjct: 61 LEGFKKPIRYCDVNVGKANGSGELQHIICGARNFAEGDIVVVALPGTVLP-GDFSISARK 119 Query: 109 IRGIESTGMMCSEKELMLS-DDSASIMELPIDAPVGGRLSD----YLELSDPIIDVSLTP 163 G S GM+CS EL LS + I+ LP A G+ D +L LSD I DV++TP Sbjct: 120 TYGKMSEGMLCSAMELGLSRTQNKGIITLPAKA---GQPGDDPRPFLRLSDTIFDVNITP 176 Query: 164 NRSDCIGVRGIALDLVA---------AGLGKLKEINISCP-LSSESIPLEIKFDLDDSSL 213 +R + RG+A ++ + A E+ + P +S +++P++++ D Sbjct: 177 DRGYALSARGLAREIASSFNLTYVDPADDPAAAELRVQVPDVSGDALPVDVRNTAD---- 232 Query: 214 CKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 K F + V+G+ + A P WM ++L G R ++ D+TNYV G P H FDA +I Sbjct: 233 VKRFGIREVRGIDPSAATPFWMERQLMLCGQRPVNLPTDVTNYVMFLYGQPMHAFDADKI 292 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 LTVR A GE + LD E +L+P+++VIA + IQS+AG++GG + D+TT V Sbjct: 293 KGGLTVRDAQQGETLTTLDGVERNLNPEDLVIADETGIQSMAGVMGGSTSEISDSTTSVY 352 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV--SLILSLCGGTASD 390 +E A +D + IAR+ + + +++ RFERGVD P L + + + G + Sbjct: 353 LEAANFDAMTIARTSRRHKLSSEASRRFERGVD-----PALVEVALDTAAALIAGIAGGE 407 Query: 391 ICIAR----NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK----- 441 I R ++ P I + +++G+D P + + L+ +G +V + Sbjct: 408 IASGRTLIGDVPTMP-TIQMDDDYPSQMAGVDYPRGTAEKRLKEIGCAVTQAQEGESAAP 466 Query: 442 -FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 V+ P+WR D+ KADLVEE+LR+ G++ I P + Q R L+ +Q R R V Sbjct: 467 LLSVTPPTWRPDLTMKADLVEEVLRLEGIEDI---PSVVPQSPAGRGLTPRQRRRRAVGH 523 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKA 555 LA E + FI+ + ++G + + +++LNP+ + S++ T+LLP LL + Sbjct: 524 ALAWSGYTETLPSPFIADDTFDVWGLEKNDPRRNVVKVLNPLESGHSSLGTTLLPSLLDS 583 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS----------------GIE 599 RN+DR AD +++ V V ++ + R S G Sbjct: 584 LKRNIDRGQADVSLYGVEQVSFDEGNGPSPMLDVSARPSDSEVHTLIHSLPSQPLHVGTV 643 Query: 600 GSGRLWSDKSEERCRFVDLFDA------KADALSVIEPFVSLDSLRFESGAPSWYHPGR- 652 SG S+ R VD DA A+ + FV++D L +HPGR Sbjct: 644 SSGLWTSNGPWGAGRPVDTMDAIESVRVVGRAVGINFEFVNVDHLP--------WHPGRC 695 Query: 653 -----SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 G E +G+ GE HP + + G+ E+ LD+IP ++ + Sbjct: 696 AGVFLQGSPNYEPESAIGFAGELHPQVCERLGIPPRTAAAELDLDAIPFVREAVSP---- 751 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 LS + +D+A +VD +PA L +++ L++ + +FD+++ ++LGE K S+ Sbjct: 752 -QLSPFPALLQDVAVVVDNSVPAEKLRRSLMTGAGELLESIELFDIYRSEALGENKVSMT 810 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +++ V + ++ A LRS Sbjct: 811 FALKFRASDRTLTEEECNEARQAAVAHANEELGATLRS 848 >gi|332701966|ref|ZP_08422054.1| Phenylalanyl-tRNA synthetase beta chain [Desulfovibrio africanus str. Walvis Bay] gi|332552115|gb|EGJ49159.1| Phenylalanyl-tRNA synthetase beta chain [Desulfovibrio africanus str. Walvis Bay] Length = 806 Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 215/803 (26%), Positives = 401/803 (49%), Gaps = 39/803 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M +L WL++ + + +++ D LT +GLEV++V D + + VL E++P+ D Sbjct: 1 MLLSLDWLREFTPYEGTAQELADRLTMLGLEVDEVYDPFAEIRGVVVGHVLEREKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNV G A G+ +P + + K+RG++S GM+ Sbjct: 61 KLSVCKVDVGGPELLTIVCGAPNVAAGQKVPVATVGTTLP-GGLKIGKAKLRGVQSMGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL L+++ IM LP + G + LEL +I+V LTPNR DC+ + G+A ++ Sbjct: 120 CSERELALTEEHKGIMVLPDTSKPGVLFCESLELDSAVINVDLTPNRGDCLSILGLAREV 179 Query: 179 -VAAGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 +A GL KL E+ ++ +S + + D+ + LC + ++G +P+W++ Sbjct: 180 AMAYGLPLKLPEVRLNEDMSERADSF-WRIDIPEGELCPLYQARVIRGCTLGQSPDWLKY 238 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEY 295 RL A+GLR I+ +VD TNYV L+ G P+H FD + V+ V+RA +G + LD Q+ Sbjct: 239 RLIAMGLRPINNVVDATNYVMLELGQPTHAFDEDLLKGGVIQVKRAVNGSTLTTLDGQQR 298 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ D+++I R ++AG++GG +++VL+E A++ P + ++ + L + ++ Sbjct: 299 KLTADDLLIWDAERPVALAGVMGGSETEIHAGSSNVLLEAAVFRPGTVRKTARRLSLPSE 358 Query: 356 SRYRFERGVDLQGMIP-VLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKR 413 + YR ERG+D Q + P + +LI L GG + + A ++ R F S Sbjct: 359 AAYRMERGLD-QKLSPFACDRVSALIAELTGGRVLAGMAKAEPKPWQKRVHTFRLSRAAD 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G+++ E + L LG +V + ++V PS R D+E + DL+EE+ R+YG+D+I Sbjct: 418 LLGVELSSEFCRKTLTGLGCAVEAKDAAWQVESPSHRSDLEREVDLIEEVGRVYGLDRI- 476 Query: 474 SEPLPLTQVEDK------RNLSLQQSRTRYVKRVL---ASRAMMEVVNWSFISKEQSVLF 524 P L V+ LS++ ++ R+ + E +N+SF+ + L Sbjct: 477 --PAVLPHVKKSLSEAPAETLSVRTGEFAFLTRIKKWGQGVGLREAINYSFVGHKDLDLL 534 Query: 525 G-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G Q +++ NP++ + + MRT++ PGLL+ NV + +FE + V+ +D Sbjct: 535 GLPKQGRIDVANPLTEEQNVMRTTVAPGLLQNLRTNVGQGDEGLRLFEAARVFIHD---- 590 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + + G+ GR + R D D K ++ F+ L + G Sbjct: 591 EASETSARERLRLGVLLHGRRFPGFPWPRDAQFDYPDIKGLVEHLLA-FLGLPAPEVALG 649 Query: 644 -APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +W P + ++ +G G+ P + + + + + E+ L++I Sbjct: 650 QTHTWLEPCVAITVQGRD---IGVMGKLKPAVAEDYKARHAVWMAELDLEAI---WSLSA 703 Query: 703 KTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 H P RD+ + P ++ ++ + +L++DV + D ++ K E Sbjct: 704 DLVPCFHQLPKFPASWRDMTLVAPLGFPVSDIMAALRASGQKLLEDVELVDEYKPKDASE 763 Query: 761 GKKSVAIQVLIQPLKDTFRDDDI 783 +++ ++ + + T D D+ Sbjct: 764 --RNLTFRLTYRAAERTLTDQDV 784 >gi|124010426|ref|ZP_01695068.1| phenylalanyl-tRNA synthetase, beta subunit [Microscilla marina ATCC 23134] gi|123983491|gb|EAY23968.1| phenylalanyl-tRNA synthetase, beta subunit [Microscilla marina ATCC 23134] Length = 805 Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 235/833 (28%), Positives = 405/833 (48%), Gaps = 59/833 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE----ALSPFTIVKVLSVERNP 56 MK +WLK ++D +E+I LT GLEVE ++ L+ + +VL+ ++P Sbjct: 1 MKIAYNWLKQYIDLPEDIEEIGAVLTQTGLEVEGIEEYHQVEGGLTGLVVGEVLTCAKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI---PENNMIVNVRKIRGI 112 + D +I +D G+ + +VCGAPNV G + A P + + ++ + K+RG Sbjct: 61 NADKLSITTVDVGQGRPYPIVCGAPNVAAGQKVIVALPKTTLYPTSGDSFQIKKSKVRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+C+E E+ L IM L D P G + L + ++ + ++ LTPNR D Sbjct: 121 VSEGMICAEDEIGLGTAHDGIMVLDTDLPNGTPAAKALGMETEYVFEIGLTPNRVDGASH 180 Query: 172 RGIALDLVAAG-----LGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G A DL AA +++ + P + P+E+ ++++ C +A + GV+ Sbjct: 181 IGTARDLKAAFDRAMCTPSIEDFKVDSPTN----PVEVV--VENTEACPRYAGVTLSGVK 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGE 285 +P W++ RLK++GL I+ +VDITN+V + G P H FD + ++ + + V+ +G Sbjct: 235 VAESPGWLQHRLKSIGLSPINNIVDITNFVLHETGQPLHAFDLAEVTGNKVIVKTLPAGT 294 Query: 286 KILALDNQEYDLSPDNVVIA-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 + LD E LS +++I +G+ IAG+ GG +G ++TTD+ +E A + P + Sbjct: 295 PFITLDETERKLSDKDLMICDGEGKGMCIAGVFGGIKSGVKESTTDIFLESAYFAPAYVR 354 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP--- 401 R+ + + TD+ +RFERGVD I LK LI + GGT S + +I +P Sbjct: 355 RTSQKHTLKTDAAFRFERGVDPNATIYALKRAALLIKEIAGGTISSEIV--DIYPEPIGN 412 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 ++ + + RL G + IL L + E ++ F VP +R DV+ +AD++ Sbjct: 413 FEVKVKYAHIDRLIGKKLDKAQIKTILNNLDIELTQETEEGFVAIVPPYRIDVQREADVI 472 Query: 461 EEILRIYGVDQIK-SEPL---PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 EEILRIYG + I+ SE L L + LQQ+ T + LA+ E++N S Sbjct: 473 EEILRIYGYNNIEISEFLGAESLANFPAIESNKLQQNIT----QTLAANGFSEIINNSLT 528 Query: 517 SKEQSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + + ++ ILN +S ++ MR +LL L+ N++R D +FE Sbjct: 529 KPAYAAAVDQLNAENDVVILNKLSEELEVMRQTLLFSGLEVINHNINRKQKDLKLFEFGK 588 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS-VIEPF- 632 +Y +GQ A + +G E W S++ F + A A++ V + F Sbjct: 589 IYHK--TDGQYQEARQMSVFVTGNE-QAESWMAVSKQ-----SQFHSLATAIAWVCQKFG 640 Query: 633 -VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 ++++ ES S+ G+ T V+ G IL + + E+Y Sbjct: 641 LTNVENENIESNIFSF------GVNYTYKNKVIAQAGMVSDKILQMNSIEQDVFYAEIYW 694 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVF 750 + + + + +++ V+RDL+ ++D+ + + I + +R L+ V VF Sbjct: 695 EQLLKFYQDKVSFEEIPKFPE---VQRDLSLVLDEGVSFQEIKKIAEKTERNLLKSVNVF 751 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV+ GKS+ EGKK+ A++ ++Q K T D I M ++ + AV+R Sbjct: 752 DVYVGKSIPEGKKAYALRFILQDNKKTLNDKAIDKTMKKLRGAFEHQLAAVIR 804 >gi|311085874|gb|ADP65956.1| phenylalanyl-tRNA synthetase subunit beta [Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)] gi|311087026|gb|ADP67106.1| phenylalanyl-tRNA synthetase subunit beta [Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)] gi|311087592|gb|ADP67671.1| phenylalanyl-tRNA synthetase subunit beta [Buchnera aphidicola str. JF98 (Acyrthosiphon pisum)] Length = 795 Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 225/821 (27%), Positives = 393/821 (47%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-RNPDL 58 MKF+ WL++ +D V + + + +++ G+EVE V+N + + K++ N Sbjct: 1 MKFSEKWLREWIDPQVGSKILHEQISNSGIEVEHVENFKSEFHGVVVGKIVQCTFHNESN 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +L++D GK + + ++CGA N R G+ A G+ +P+N + +N + ++G S GM+ Sbjct: 61 NLKVLKVDIGKKKLLNIICGASNCRNGIKVAVATVGATLPKN-ITINKKILKGAWSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L + I+E P + VG + DY L D II VS+T NR D + + G++ ++ Sbjct: 120 CSFFELGLFLNDNKIIEFPKETLVGINVYDYFLLEDNIIKVSITSNRPDGLSILGLSRNI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A + ++ IS PL + +P +I D+ C F ++ + NV P W Sbjct: 180 AA-----INDLRIS-PLKNRLVPAVIQKKINIDIQADKECMNFFGRIIENININVDTPFW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L + S + + +I +YV ++ G P ++ DA I+D + VR A E + +N Sbjct: 234 MKKKLFFSNVLSENIITNIIHYVLIELGQPLNILDADNINDSIIVRMARHEEDLFLKNNI 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ + +V + +I S+ G I D NT ++ + +L + I+ K + + Sbjct: 294 KISLNENILVFSDSNKILSLPGNINSNIVDVDKNTKNIFLSSSLINRKYISYIIKKMNMN 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI----CIARNITYKPRKIVFMNS 409 T Y + GVD +++ LIL +CGG I C + +K I + Sbjct: 354 TVLEYHY-YGVDPFLQNYAIEYATDLILKICGGVPGPINGKKCNFQ--IHKNNTIRLHHE 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G + +IL RL + + + ++V PSWR D+ + D++ +ILRIY Sbjct: 411 RLNKIIGFFIDTSVISKILYRLDYQLKFQKTFWDVISPSWRFDILIEEDVIGDILRIYEY 470 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + PL K+N L S + +L ++ EV+N+ FI + L + Sbjct: 471 NNVHLIPLKEFLNCSKKN-ELTDSLLKKSAVILINQGYHEVINYGFIDPKIQNLIFPNEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----Q 584 L + NPIS DMS MR SL PGLLK N +R IFE + D E + Sbjct: 530 NLLLSNPISQDMSCMRLSLWPGLLKNISYNKNRQQKSIRIFESGLCFSIDKRENLGIRQE 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 ++AA I SG + R +D +D K D S++E L+ + F Sbjct: 590 IFLAAAI---------SGNYIKENWYYNIRKMDFYDLKGDLESILESICQLNEIEFRRKK 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HP +S I ++ G G P + +S+ FE+ L++ K Sbjct: 641 IHGLHPEQSASIYFRNYLI-GSIGAIDPRLEKALNVSSTTFLFEISLNNFS-----DIKP 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEGK 762 KV +S V+RD+A ++ + I A ++ K ++ + ++ +FD++ K K Sbjct: 695 LKVEEISKFPTVRRDIAILISEEIAAYNVIEQCKIFFINEKV-EINLFDIYSYKESHNHK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+ I + Q K TF+D++I +++D + + KK AVLR Sbjct: 754 KSLGISFIFQNKKRTFQDNEINLMIDDCIGVLQKKFQAVLR 794 >gi|314928100|gb|EFS91931.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL044PA1] gi|314972100|gb|EFT16197.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL037PA3] gi|328907930|gb|EGG27690.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium sp. P08] Length = 839 Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust. Identities = 236/859 (27%), Positives = 388/859 (45%), Gaps = 75/859 (8%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + + + LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQALVNLPDGTTTDDVVQALTNHTATVEKVEVVGGELTGPLVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + I+ R+D G + +VCGAPN G V + PG+ +P Sbjct: 61 QKNGKIINWCRVDVGPRYNAEGHPNNVEEGIEGRGIVCGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDHTGIITLPSSVEGHQLVPGENALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 ++DV +TP+ C+ +RGIA ++ A ++ P+ P+ + DD C Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHAMSVHFRDPYDEDPIGPVHGPVAVDVHSDD---C 236 Query: 215 KGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 F V + + P ++ R+ G+R I+ VD+TNYV L+ G P H +DA ++S Sbjct: 237 SQFIAVPVSDLAPDAPTPRFIADRITRAGMRPINLTVDVTNYVMLESGQPLHAYDADKVS 296 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 L VR A GE ++ LD+ + L PD++VIA D ++AG++GG +T +++ Sbjct: 297 GTLVVRNAHDGEHLVTLDDTDRTLDPDDLVIADDSGAIALAGVMGGAATEMTAESTSIIL 356 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGGTA 388 E A +DP+ +AR+ + + +++ RFERGVD PV H + L+ G T Sbjct: 357 EGAHFDPMTVARAYRRHRLGSEASRRFERGVD-----PVCAHTAAVRAAELLAQYGGATI 411 Query: 389 SDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVP 447 + + + PR+ + N+++ R+ G V E+ + IL R G V D + P Sbjct: 412 GEPTVVGEVPEMPRQTI--NADLPSRILGTKVSTEEVIEILTRSGVKVTALGDSLNLVAP 469 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 SWR D+ + D VEEI R G D+I EP+ L L+ Q R V R + Sbjct: 470 SWRPDLVDAYDYVEEIGRKIGFDRI--EPV-LPPSLGASGLTKGQRGRRRVLRSIVEAGF 526 Query: 508 MEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ R Sbjct: 527 VELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDYTHPYLRTTLLPGLFHAVTTNMSR 586 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKG-------SSGIEGSGRL--------W-S 606 + D A+FE V+ +P R + + RL W Sbjct: 587 SQEDLAVFESGTVFRAVSPAAAPRPGVNERPADDVLAEIHAALPAQPRLLAAVICGNWLP 646 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 D+ +E+ D A A ++ + + AP +HPGR + + V+G+ Sbjct: 647 DRWDEQSVKADWRHAVLVAQKAVDALGVTLVRKADRQAP--WHPGRCAALTVDGK-VIGH 703 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 GE HP ++ GL C E+ LD++ + +V +SS K D+A +VD+ Sbjct: 704 AGELHPTVVSKAGLPQRTCAVELDLDALVAAAP---HGGQVTAISSFPVAKEDVALVVDE 760 Query: 727 HIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 + A + +I+ L++ V +FDV++G+ +G +KS+A + ++ T D + Sbjct: 761 SVAAEDVREALIEGAGSLLESVELFDVYEGEQVGNKRKSLAFNLRLRAADRTLTDAEAGE 820 Query: 786 LMDRIVENVVKKTNAVLRS 804 + V + A LRS Sbjct: 821 ARNAAVARAEEAYGAQLRS 839 >gi|254671876|emb|CBA04114.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha275] Length = 548 Score = 286 bits (732), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 173/520 (33%), Positives = 287/520 (55%), Gaps = 25/520 (4%) Query: 94 GSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIME-LPIDAPVGGRLSDYLEL 152 G+ +P N + K+RG+ S GM+CS EL L DD + LP DAPVG + +YL+L Sbjct: 14 GAVLP-GNFKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDL 72 Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDD 210 D + + +TPNR+DC+ V+GIA ++ A G + EI+ + S P++I D Sbjct: 73 DDTLFTLKITPNRADCLSVKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD- 131 Query: 211 SSLCKGFAMCCVKGVRNNVA-PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 C F ++ V A P+WM+QRL+ G+RSISALVDI NYV L+ G P HVFDA Sbjct: 132 ---CGRFISRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDA 188 Query: 270 SRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 ++S L +RRA GE + L+ + LS + +V+A + + S+AG++GG + D T Sbjct: 189 DKLSGSLHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQ 248 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS 389 ++++E A + P IA + G +DS +RFERGVD + ++ L+L +CGG A Sbjct: 249 NIVLEAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAG 308 Query: 390 DICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW 449 ++ A+ + +++ +K + G+D+P E IL+ LG + F V+ PS+ Sbjct: 309 EMVEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF 368 Query: 450 RQDVEEKADLVEEILRIYGVDQI----KSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLAS 504 R D+E +ADL+EEI R+YG + I S L + ++ + R R R+ V +A+ Sbjct: 369 RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETR-------RPRFAVYNEMAA 421 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 R EVV+++F+ ++ F + + NP++A + MR++L+ GL++ N++R Sbjct: 422 RGYREVVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQ 481 Query: 565 ADFAIFEVSHVYENDTP----EGQKYMAAGIRKGSSGIEG 600 +FE++ V+ + + ++ +R+G +G G Sbjct: 482 NRVCVFEIARVFSKGSDGQFVQNERIGRIVVRRGHAGTMG 521 >gi|188997584|ref|YP_001931835.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] gi|188932651|gb|ACD67281.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurihydrogenibium sp. YO3AOP1] Length = 803 Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 236/814 (28%), Positives = 391/814 (48%), Gaps = 48/814 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MK SW+K+ +D D+ + + L + G+E + + T VKVLSV ++P+ D Sbjct: 1 MKVPYSWIKEFIDIDIPVSDVVVKLNTTGIEATFYKFGQYIPNLTTVKVLSVIKHPEKDK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE-----S 114 I ++ G +E Q++ GA NV+ + + A G+ I R+I+ + S Sbjct: 61 LYICKVSDG-SREYQIITGADNVKENDVVILAKVGALI-------KGREIKAVSFGSYTS 112 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRG 173 GM+ S +EL + + S I L + PVG + L L D I+++ +TPNR D + VRG Sbjct: 113 EGMLLSLEELEVEEKSEGIFILDENTPVGADPNKILGLGEDYILEIEITPNRGDALSVRG 172 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 +A ++ A K KEI L+ + + I+ D + +K V+ +P Sbjct: 173 LAREIGAIFNLKRKEIQPKPVLTDKETAINIETDK-----VYRYIGTIIKNVKIKNSPLD 227 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +R +L G+ I+ +VDITNYV L G P H FD ++ +TVR A GEKI+ LD Q Sbjct: 228 VRLKLIKSGISVINNIVDITNYVLLQEGQPLHAFDLDKLEGGITVRYAKEGEKIITLDGQ 287 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E +L P +VVIA + +IAG+IGG+++ D+NT ++L+E A++DP ++ ++ K LGI+ Sbjct: 288 EKELKPTDVVIADSKKALAIAGVIGGENSKIDENTKNILLEAAVFDPASVRKTSKRLGIL 347 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 TDS YRFERGVD++ LIL+L GG Y P+ +V V++ Sbjct: 348 TDSSYRFERGVDVEHTSKASNFATQLILNLAGGEVEAYKDVYVKPYTPKTVVLKPEFVEK 407 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQI 472 + G + + LERL + ++ +P +R D+E DL+EE+ RIYG D Sbjct: 408 VLGEKIKASEIKSTLERLEIPTQIQENQINAEIPPFRAYDLERPIDLIEEVARIYGYDNF 467 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 + P VE SL V+ EV+N++F S+E E++ Sbjct: 468 -TPTYPRVPVEAYEK-SLYYDFDNKVRTYFLDNGFTEVLNYTFTSEEIYNALKLPIPEIK 525 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ-KYMAAG- 590 I N I S +R ++ LL+ N+ D +IFE+S + D E + +A G Sbjct: 526 ITNYILKSHSILRDRIVVSLLENLKENLRFGRKDLSIFELSSTFFKDFEEIRVGCLAVGK 585 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + +G + E R + S + + + + L + ++ +++ + HP Sbjct: 586 LVEGFNYTEKERRFSTTHSWNFLKLKGVVENLLNKLGIKNYQLTDENIEV------FLHP 639 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT-------- 702 S I+ + +G+ G+ HP I + E+ L +P +K + Sbjct: 640 YGSANIQVNG-YDIGFIGKIHPEIAHKLEIPKDTYVAELKLRHVPREIEKESLLDGYLFT 698 Query: 703 ---KTKKVV--HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKS 757 K + VV L RDLAF++D+ + G L I + + +V +FDV+ Sbjct: 699 YYLKKEPVVFQELPKFPSAYRDLAFVIDESVKVGKLKEDILKASKYVKEVKLFDVY---F 755 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L E KKSVA V + + D+++ I+++ I+ Sbjct: 756 LSENKKSVAFNVEFFNPEKSLSDEEVNIIVEEIL 789 >gi|225011312|ref|ZP_03701767.1| phenylalanyl-tRNA synthetase, beta subunit [Flavobacteria bacterium MS024-3C] gi|225004527|gb|EEG42494.1| phenylalanyl-tRNA synthetase, beta subunit [Flavobacteria bacterium MS024-3C] Length = 808 Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 237/833 (28%), Positives = 392/833 (47%), Gaps = 55/833 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK+ + TD ++EK LT +GLEVE V E+ L + VLS E++P Sbjct: 1 MKISYNWLKEFIATDWNVEKTSQLLTDLGLEVEGVAPFESIKGGLQGVVVGHVLSCEKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNM-IVNVRKIRGI 112 + D + ++ G + +Q+VCGAPNV G+ A G+ + PE I+ KIRG Sbjct: 61 NADKLQLTKVSIGNNTTLQIVCGAPNVTKGIKVAVATIGTTLYTPEGEAWIIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 ES GM+CSE EL L IM L G S + D +I++ LTPNR+D + Sbjct: 121 ESHGMLCSENELGLGQGHDGIMILEDHLKEGAACSSVFNVVRDEVIEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPL--------EIKFDLDDSSLCKGFAMCCVK 223 G+A DL A LK+ IS L + S+ I+ +D L ++ + Sbjct: 181 FGVARDLKAG----LKQQGISKELITPSVMQFSVDNRISTIQVQVDTPDLAPRYSGITIS 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 + +P+W++ RLKA+GL I+ +VD TNYV + G P H FD ++I + V+ Sbjct: 237 DLTVKESPDWIKNRLKAIGLSPINNVVDATNYVLHELGQPLHAFDLAKIEGKKVIVKTLE 296 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G K LD E LS ++++I + +AG+ GG+ +G TT V +E A ++P++ Sbjct: 297 QGTKFTTLDGIERVLSSEDLMICDAKKPMCLAGVFGGQDSGVTAQTTAVFLESAYFNPVS 356 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKP 401 I +S K G+ TD+ +RFERG+D+ + LK LI L GG +SDI + Sbjct: 357 IRKSAKRHGLSTDASFRFERGIDINLVEEALKRAALLIKELAGGQISSDIIDLYPKKEEN 416 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLV 460 ++ + L G ++P + IL L V + +++P +R DV+ + D++ Sbjct: 417 YQVFLTFKRIYSLIGEEIPTDTIKSILSSLEIRVNNVTESGLGLTIPFYRVDVQREVDVI 476 Query: 461 EEILRIYGVDQI---KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 EEILR+YG + I K + + K + +Q + LA++ E++ S S Sbjct: 477 EEILRVYGYNNIHFSKKINASIAYTDPKADHIIQNK----IGDSLAAQGFNEILTNSLTS 532 Query: 518 KE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + Q Q+ + ILNP+S D+S ++TS+L L+ N++R +FE Sbjct: 533 PQPLQHTQDTELQQAVTILNPLSNDLSILKTSMLFTGLETVSYNINRKTNRLKLFEFGKT 592 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 Y D + + + G E W S+E+ F FD K +++E + Sbjct: 593 YHQIDGNRRENKHLSILMTGKRHTEN----WLS-SDEKLSF---FDLKTVVENILER-LG 643 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + + GI +S + + FG +L + + + D+I Sbjct: 644 IQKWKISEATADLF---SEGISYSSRKDTIVTFGVLSNKLLKKLDIKQEVLFADFNWDAI 700 Query: 695 PISQKKRTKTKKVVHLSSL--HP-VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 + TK+ + + +P V RD A ++ + L KN + + + +V +F Sbjct: 701 L-----KLLTKETIKFQDIPKYPEVSRDFALLIKNSVTFEQLAQTAKNTEKKYLKEVGLF 755 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 DV+ GK+L EG KS + ++Q T + I +M ++ + A LR Sbjct: 756 DVYTGKNLPEGTKSYGVNFVLQDQNATLEEKQIDKIMQKLQAAFERDFEASLR 808 >gi|219682061|ref|YP_002468445.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] gi|219621794|gb|ACL29950.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum)] Length = 795 Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 225/821 (27%), Positives = 392/821 (47%), Gaps = 45/821 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE-RNPDL 58 MKF+ WL++ +D V + + + +++ G+EVE V+N + + K++ N Sbjct: 1 MKFSEKWLREWIDPQVGSKILHEQISNSGIEVEHVENFKSEFHGVVVGKIVQCTFHNESN 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +L++D GK + + ++CGA N R G+ A G+ +P+N + +N + ++G S GM+ Sbjct: 61 NLKVLKVDIGKKKLLNIICGASNCRNGIKVAVATVGATLPKN-ITINKKILKGAWSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L + I+E P + VG + DY L D II VS+T NR D + + G++ ++ Sbjct: 120 CSFFELGLFLNDNKIIEFPKETLVGINVYDYFLLEDNIIKVSITSNRPDGLSILGLSRNI 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 A + + IS PL + +P +I D+ C F ++ + NV P W Sbjct: 180 AA-----INNLRIS-PLKNRLVPAVIQKKINIDIQADKECMNFFGRIIENININVDTPFW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M+++L + S + + +I +YV ++ G P ++ DA I+D + VR A E + +N Sbjct: 234 MKKKLFFSNVLSENIITNIIHYVLIELGQPLNILDADNINDSIIVRMARHEEDLFLKNNI 293 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 + L+ + +V + +I S+ G I D NT ++ + +L + I+ K + + Sbjct: 294 KISLNENILVFSDSNKILSLPGNINSNIVDVDKNTKNIFLSSSLINRKYISYIIKKMNMN 353 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI----CIARNITYKPRKIVFMNS 409 T Y + GVD +++ LIL +CGG I C + +K I + Sbjct: 354 TVLEYHY-YGVDPFLQNYAIEYATDLILKICGGVPGPINGKKCNFQ--IHKNNTIRLHHE 410 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + ++ G + +IL RL + + + ++V PSWR D+ + D++ +ILRIY Sbjct: 411 RLNKIIGFFIDTSVISKILYRLDYQLKFQKTFWDVISPSWRFDILIEEDVIGDILRIYEY 470 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 + + PL K+N L S + +L ++ EV+N+ FI + L + Sbjct: 471 NNVHLIPLKEFLNCSKKN-ELTDSLLKKSAVILINQGYHEVINYGFIDPKIQNLIFPNEE 529 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----Q 584 L + NPIS DMS MR SL PGLLK N +R IFE + D E + Sbjct: 530 NLLLSNPISQDMSCMRLSLWPGLLKNISYNKNRQQKSIRIFESGLCFSIDKRENLGIRQE 589 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 ++AA I SG + R +D +D K D S++E L+ + F Sbjct: 590 IFLAAAI---------SGNYIKENWYYNIRKMDFYDLKGDLESILESICQLNEIEFRRKK 640 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 HP +S I ++ G G P + +S+ FE+ L++ K Sbjct: 641 IHGLHPEQSASIYFRNYLI-GSIGAIDPRLEKALNVSSTTFLFEISLNNFS-----DIKP 694 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGKSLGEGK 762 KV +S V+RD+A ++ + I A ++ K ++ + ++ +FD++ K K Sbjct: 695 LKVEEISKFPTVRRDIAILISEEIAAYNVIEQCKIFFINEKV-EINLFDIYSYKESHNHK 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+ I + Q K TF+D++I +++D + + KK AVLR Sbjct: 754 KSLGISFIFQNKKRTFQDNEINLMIDDCIGVLQKKFQAVLR 794 >gi|315094898|gb|EFT66874.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL060PA1] Length = 839 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 244/867 (28%), Positives = 395/867 (45%), Gaps = 91/867 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSS 212 ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ +D S Sbjct: 180 EVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDDEPIGPVLGPVAVDVQSD 234 Query: 213 LCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA Sbjct: 235 ACSQFIALPVSGMNPGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADN 294 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +S + VR+A GE +L D+ + L PD++VIA D +AG++GG TT + Sbjct: 295 VSGTIVVRKAHEGEHLLTPDDTDRTLDPDDLVIADDLGAIGLAGVMGGAATEVTAETTSI 354 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGG 386 ++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ G Sbjct: 355 ILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGA 409 Query: 387 TASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 T + + + PR+ + N+++ R+ G P E+ + IL R G V D + Sbjct: 410 TVGEPTVVGEVPEMPRQTI--NADLPNRILGTKGPTEEVIEILTRSGVKVTALGDSLHLV 467 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P+WR D+ + D VEEI R G D+IK+ L L+ Q R V R + Sbjct: 468 APTWRPDLVDAYDYVEEIGRKIGFDRIKAV---LPPSLGASGLTKAQRGRRRVLRSVVEA 524 Query: 506 AMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 +E++ FI K+ VL G +++ NP+ +RT+LLPGL A N+ Sbjct: 525 GFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNM 584 Query: 561 DRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSGIEGS- 601 R+ D A+FE V+ TP E + A R ++ I GS Sbjct: 585 SRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSW 644 Query: 602 -GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 W +S + R L K ADAL V L ++ + +HPGR + Sbjct: 645 LPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIV 696 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS K Sbjct: 697 DGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKE 752 Query: 719 DLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D+A +VD+ + A + +I+ L++ V +FDV++G+ +G +KS+A + ++ T Sbjct: 753 DVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGYNRKSLAFNLRLRGADRT 812 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D + D V + A LRS Sbjct: 813 LTDSEALEARDAAVVRAEETCGAQLRS 839 >gi|313893580|ref|ZP_07827149.1| phenylalanine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] gi|313441851|gb|EFR60274.1| phenylalanine--tRNA ligase, beta subunit [Veillonella sp. oral taxon 158 str. F0412] Length = 699 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 197/699 (28%), Positives = 339/699 (48%), Gaps = 43/699 (6%) Query: 109 IRGIESTGMMCSEKE------LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ S GM CS E L+L +++ I P + P+G + D L ++D + + LT Sbjct: 1 MRGVASEGMFCSVAEFGISSDLVLPEEAQGIYIFPENTPIGLDVKDVLGMNDTVYEFELT 60 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR+DC + G++ + K I + ESI + +++ LC F V Sbjct: 61 ANRADCFSMVGLSREFGMMTNQKALFPVIMVNENGESIEGKASVEIEADDLCTRFTARVV 120 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRA 281 V+ +P WM+ RL+ G+R I+ +VD+TNYV L+ G P H +D + L RRA Sbjct: 121 TDVKVEPSPLWMQNRLRNSGIRPINNVVDVTNYVMLELGQPMHAYDYDHVKGHKLVARRA 180 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GE ++ LD E +L+ ++IA R +AGI+GG + + TT V+ E A+++ Sbjct: 181 KNGEVLVTLDGSERELNDSMLIIADAERPVGVAGIMGGFDSEVTNETTTVMFEAAVFNGP 240 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 +I R+ K LG+ +++ RFERGV+ + + L+ +C D+ + ++ P Sbjct: 241 SIRRTAKALGMRSEASGRFERGVNHKYTAYAIDRAAQLLQQICPSCKVDVGVI-DVYKNP 299 Query: 402 ---RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 + F ++ G ++ ++ +RIL L F V E D+ VP+WR DV D Sbjct: 300 VEQHTVTFTAEQINDYLGTNIEKDEMVRILTALEFVVTEEGDRLSALVPTWRGDVTVMPD 359 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 + EE+ RIY D I P V ++ +++ T+ V LA M +++ +SF+ K Sbjct: 360 IAEEVARIYNYDNIA--PTIPVAVLSSGGMTPKKALTKQVTHALAKLGMTQIITFSFMHK 417 Query: 519 E---QSVLFGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + +L G R + ILNPIS + MRT+L+P ++ A RN+ + D +FE + Sbjct: 418 DGLTNMMLPEGDSRYTAIPILNPISEEFPYMRTTLVPAVIDAAKRNIAQQNKDLWLFETA 477 Query: 574 HVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA--DA 625 +VYE + P ++ MA GI G + G W+ D +D K DA Sbjct: 478 NVYEPKALPLTEVPH-ERPMACGILMGKANQAG----WNQAEHT----TDFYDVKGIVDA 528 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 L + + G ++HPG S +++ Y GE HP + F L + Sbjct: 529 LLAE---LGVKGYEINRGTEPYFHPGVSAQYVVDGKMIAQY-GELHPQVSKNFDLPGKVY 584 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLI 744 FE+ L+++ + S RDLA + + +G +++IIK + + Sbjct: 585 MFEIDLEAV---LSLTIPAFRYTSFSKFPGTSRDLAIVAPVSVSSGEILSIIKEHGGEYL 641 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + ++FDV++G+ + G +S+A + + ++ T D+DI Sbjct: 642 ESASIFDVYEGEHIEAGYRSLAYNLQFRSMEGTLNDEDI 680 >gi|312871725|ref|ZP_07731813.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] gi|311092667|gb|EFQ51023.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LEAF 3008A-a] Length = 804 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 225/825 (27%), Positives = 409/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGQDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITNGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG +++D + + +D + K ++ I + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYADNWQHLDQNIDFYYVKGQLTNIFIALGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|325912173|ref|ZP_08174571.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] gi|325476123|gb|EGC79291.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners UPII 143-D] Length = 804 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 225/825 (27%), Positives = 407/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGQDWTTSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG ++ D + + +D + K ++ I + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYDDNWQHLDQNIDFYYVKGQLTNIFIALGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|182416871|ref|ZP_02948257.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium butyricum 5521] gi|237667936|ref|ZP_04527920.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379333|gb|EDT76832.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium butyricum 5521] gi|237656284|gb|EEP53840.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium butyricum E4 str. BoNT E BL5262] Length = 792 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 232/834 (27%), Positives = 406/834 (48%), Gaps = 74/834 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK +WL+D+++ +VS +++ D LT G ++E+ + + + K+ + ++PD + Sbjct: 1 MKVPFNWLQDYVEINVSPKELGDKLTLTGSQLEELIVQGDTIDKVVTGKITQIVKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + IQ+V A N++ + A GS + + I K+RG S GM Sbjct: 61 KLSICQVDIGT-ESIQIVTAANNMKEQDIVPVALHGSTLADGTKIKK-GKLRGEVSNGMF 118 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 CSE+EL ++ D +M +P D P+G + + L+L+ I+D +T NR DC+ + G+A Sbjct: 119 CSEEELGIAGDEPVHGLMIMPKDTPLGADIKEVLKLNKAILDFEITSNRPDCLSIVGMAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + AA K N+ E ++ E+K ++ D LC + VK V+ +P+WM+ Sbjct: 179 ETAAALRTSYKMPNLEYKTIGEGNVNDELKVEVKDD-LCLRYMARKVKNVKVQSSPSWMQ 237 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 +RL G+R I +VDITN+V L+ G P H +DA I ++ + V RA + EK LD E Sbjct: 238 ERLLEAGIRPIDNIVDITNFVMLELGQPMHAYDAREITTNKIVVERAKADEKFTTLDEAE 297 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L + I I +AGI+GG ++ ++T +V+ E A +D NI + K L + + Sbjct: 298 RILDDSMLCIKDSDTIVGLAGIMGGLNSEIKEDTKEVIFESANFDGTNIRVNSKKLNLRS 357 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKR 413 ++ RFE+ +D + +LI L G D I N + K+V + + + Sbjct: 358 EASSRFEKDIDPNLTELAIDRACALICELGAGEVVDGTIDVYNKKKEAGKVVVDANWINK 417 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G D+ E+ R L+ + + D V+ ++R D+ + D+ EEI RI+G D I Sbjct: 418 FLGTDLSKEEMKRCLDSVDLFTEIDGDNLVVTASTFRIDIAIREDIAEEIARIHGYDVI- 476 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--------EVVNWSFIS-------- 517 P + V R +Y KR+L + +M + +++SF+S Sbjct: 477 --PATIFSVSTSR-------EPKYRKRLLDDKMVMLATGSGLNQSISYSFVSPKVFDKIC 527 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E S L + ++I NP+ D S MRTS LP +++ GRN R + +FE+ VY Sbjct: 528 VPEDSEL----RNVVKIKNPLGEDYSVMRTSTLPSMMECLGRNYSRNNSYARLFEMGKVY 583 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 EN P + + G ++ D C ++DL K +++E Sbjct: 584 IKNEDENKLPIERNILTIG-------------MYGD-----CDYLDL---KGAVENIVEG 622 Query: 632 FVSLDSLRFESGAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 + + ++E + + YHPG++ + I G GE H ++ + +G+ E+ Sbjct: 623 L-GIKNAKYERESENVSYHPGKTAKLVIGKNIA-GTLGEVHLDVTENYGIDESCYVAELN 680 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTV 749 LD + + K K L V RD+A +VD + + + I+ +++ V + Sbjct: 681 LDVLYEAADMDRKYKA---LPKFPAVTRDIALLVDDAVLVQEIEDCIRKAGGNIVEKVQL 737 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 FD+++GK + EGKKS+A + + T +D D+ + D+I+ ++ K A LR Sbjct: 738 FDIYKGKQIPEGKKSIAYAIAYRDENKTLQDKDVNKVHDKILRSLEYKLGATLR 791 >gi|259500539|ref|ZP_05743441.1| phenylalanyl-tRNA synthetase [Lactobacillus iners DSM 13335] gi|302191229|ref|ZP_07267483.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus iners AB-1] gi|259167923|gb|EEW52418.1| phenylalanyl-tRNA synthetase [Lactobacillus iners DSM 13335] Length = 804 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 225/825 (27%), Positives = 408/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGQDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG +++D + + +D + K ++ I + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYADNWQHLDQNIDFYYVKGQLTNIFIALGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|170781636|ref|YP_001709968.1| phenylalanyl-tRNA synthetase subunit beta [Clavibacter michiganensis subsp. sepedonicus] gi|169156204|emb|CAQ01346.1| putative phenylalanyl-tRNA synthetase beta chain [Clavibacter michiganensis subsp. sepedonicus] Length = 847 Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 243/862 (28%), Positives = 395/862 (45%), Gaps = 75/862 (8%) Query: 1 MKFTLSWLKDH--LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ +SWL +H L V+ E + +L +GLE E V P + +VL P Sbjct: 1 MRIPISWLGEHVELPAGVTPEDVHASLVKVGLEEEDVHAFSISGPVVVGQVLEASPEPQT 60 Query: 59 D------CAILRIDTGKH-----QEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + C++ G ++++ +VCGA N VG V + PG+ +P ++ Sbjct: 61 NGKTINWCSVRVAPEGATAADGGEDVRGIVCGAHNFVVGDKVVVSLPGAVLP-GPFPISA 119 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RK G S GM+ S +EL L ++ I+ L +D VG L L D ++V++TP Sbjct: 120 RKTYGHVSDGMIASSRELGLGEEHDGILVLSTLGLDPEVGTDALALLHLDDQAVEVNVTP 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKG------ 216 +R +RGIA + A + + L + P++ ++ +DD++ +G Sbjct: 180 DRGYAFSIRGIAREYAHATGAAFTDPADALALLAADAPVQGVEVRVDDAAPIRGRVGADV 239 Query: 217 FAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F V G+ + P WM RL G+RSIS VDITNYV L+ G P H +D R+ Sbjct: 240 FVTRVVSGLDLSRPTPPWMVSRLTLAGVRSISLAVDITNYVMLELGQPLHAYDLDRLQGG 299 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VRRA GE ++ LD +E L +++VIA +AG++GG T+ VL+E Sbjct: 300 IVVRRAAEGETLVTLDGRERALHVEDLVIADGSGPVGLAGVMGGAATEIGAGTSRVLIEA 359 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A +DP++IAR+ + + +++ RFERGVD + V L+ L GG A + Sbjct: 360 AGFDPVSIARTARRHKLPSEASKRFERGVDPRIAPAAAARAVQLLEELAGGHAEGLGSIL 419 Query: 396 NITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + T PR+ V ++ + L G+D ++ L +G ++ V+ P+WR D+ Sbjct: 420 DTT-APREAVELSLAYPASLVGVDYTADEVRHALVDVGCALEERDGVLVVTPPTWRPDLR 478 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 +ADLVEE+ RI G D+I P L R L+ Q R LA+ + EV+ Sbjct: 479 HRADLVEEVARIVGYDRI---PAVLPVAPPGRGLTAAQRLRRQASIALAAGGLTEVMGSP 535 Query: 515 FISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 F S+ Q+ FG R+ + + NP+ +R SLLPGL+ RN+ R D AIF Sbjct: 536 FASEAQNARFGAADRDDAPAVRLANPLDVAFPFLRRSLLPGLVDIARRNLSRGSTDLAIF 595 Query: 571 EVSHVY---------ENDTPEG-QKYMAAGIRKGSSGIEGSGR-----LWSDK------- 608 E V+ + P G + A +R +GI R + D Sbjct: 596 ETGTVFLPRAGVAYGSPEMPPGAARPDADALRALDAGIPPQPRHVGVLILGDAVPKQPGT 655 Query: 609 SEERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK---TSAEI 662 +R VD DA A A+ V +RFE GA HPGR+ ++ + Sbjct: 656 PAQRAGLVDALDAVRQLAHAVGV--------EIRFEQGAHIALHPGRTAAVEAVTADGPV 707 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 ++G+ GE P + L + EV LD + + +V L+S+ +DL+ Sbjct: 708 IVGFAGELLPALAAELDLPERVALAEVDLDRL---VELAGGAVEVRTLTSMPVATQDLSL 764 Query: 723 IVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 +V +PAG L+ +++ L++ + D ++G + +G +S+ + + + T Sbjct: 765 VVPLDVPAGELLRTVVEGAGELLETARLVDDYRGPGVADGTRSLTLALRFRAPDRTLTAA 824 Query: 782 DIRILMDRIVENVVKKTNAVLR 803 + D V ++ A LR Sbjct: 825 EASAARDGSVRLAAERFGAALR 846 >gi|145594430|ref|YP_001158727.1| phenylalanyl-tRNA synthetase, beta subunit [Salinispora tropica CNB-440] gi|145303767|gb|ABP54349.1| phenylalanyl-tRNA synthetase beta subunit [Salinispora tropica CNB-440] Length = 861 Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 258/873 (29%), Positives = 399/873 (45%), Gaps = 133/873 (15%) Query: 1 MKFTLSWLKDHLDTDVSLEK--ICDTLTSIGLEVEKVDNREAL--SPFTIVKVLSVE--- 53 M+ ++SWL++++D L + +L +GLEVE + + P + +V +E Sbjct: 1 MRVSVSWLREYVDLPAHLTPADLEQSLVGLGLEVESIVDLAGTVTGPLVVGEVREIEELT 60 Query: 54 --RNPDLDCAILRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + P C R+D TG+ QEI VCGA N VG V PG +P N + Sbjct: 61 GFKKPIRFC---RVDVGDANGTGELQEI--VCGARNFAVGDRVVVILPGGVLP-GNFAIG 114 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTP 163 R+ G S GM+CS KEL L DD A I+ LP +P G + L D +++V LTP Sbjct: 115 ARRTYGRNSRGMICSAKELGLGDDHAGIIVLPGSSPAKPGDDARPVVGLDDVVVEVELTP 174 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINI-SCPLSSES--IPLEIKFDLDDSSLCKGFAMC 220 +R + VRGIA +L A ++ + S P +E+ P+E++ D C FA Sbjct: 175 DRGYQMSVRGIARELSHAFGVPFRDPGLASAPAGTEAPAYPVEVR----DPVGCDRFAAR 230 Query: 221 CVKGVRNNVAPN--WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V+GV N AP+ WM QRL G+RS+S VDITNYV L+ G P H FDA RI+ L V Sbjct: 231 MVRGV-NPAAPSPAWMVQRLTTAGIRSLSLPVDITNYVMLELGQPMHAFDADRITGSLVV 289 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-------------SIAGIIGGKHAGCD 325 RRA +GE++ LD L +++VI+ G S+A ++GG+ + Sbjct: 290 RRAVAGEQLTTLDGVVRTLVAEDMVISDAGLPNPNPAAGADAGAPISLAAVMGGESSEVV 349 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 T++VL E A WDP+ + R+ + + + + R+ERGVD + + V L++ G Sbjct: 350 AETSNVLFEAAHWDPVMVGRTARRHRLFSAAAKRWERGVDPALPLVAIDRAVRLLVEHGG 409 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---- 441 G + + P +V R G+ P + +L +G +V D+ Sbjct: 410 GATGAEILDIDHRTSPVPVVMPADLPSRRVGVAYPADRVAALLTEIGCTVAAGPDQLTAD 469 Query: 442 -------------FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 F V+ P+WR D+ + ADLVEE++R+ G D++ P L R L Sbjct: 470 PGEVGVAAGGAVSFVVTPPTWRPDLTDPADLVEEVVRLDGYDRV---PAVLPVAPAGRGL 526 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSN 543 + QQ R R V R+LA R +EV+ F++ E + G +R + + NP+S + Sbjct: 527 TWQQRRRRAVARMLADRGYVEVLCSPFVAVELADQLGLPAGDARRRAVRLANPLSEEEPA 586 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT----------------------- 580 +RT+LL LL RN+ R D A++E+ V+ T Sbjct: 587 LRTTLLGPLLGVLRRNLGRGQRDLALYEIGTVFHPRTEAGTPPRMGVEHRPSDAELAAAD 646 Query: 581 ---PEGQKYMA---AG-IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 PE +++A AG + G EG W+D E + D ++V Sbjct: 647 AVLPEQPQHVAVVLAGEVEPGGWWGEGRPAGWADAVEAARTVLAAAGIPEDRVTV----- 701 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 R AP +HPGR + + +GY GE HP ++ L E+ LD+ Sbjct: 702 -----RAVEHAP--WHPGRCAQLVVDG-VTVGYAGELHPAVIAGLELPRRTAAMELDLDA 753 Query: 694 IPISQKKRTKTKKVVHLSSLHPV----KRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV 749 +P + ++ +SS P + V G LV + L++ V + Sbjct: 754 VPAAPVRQAPV-----ISSFPPALIDVALVVDVDVPVAQVQGALV---EGAGELLESVRL 805 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 FDV+ G+ LG G++S+A ++ TFR D Sbjct: 806 FDVYAGEQLGAGRRSLAYKL-------TFRAPD 831 >gi|329920117|ref|ZP_08276948.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] gi|328936571|gb|EGG33015.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners SPIN 1401G] Length = 804 Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 225/825 (27%), Positives = 407/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGQDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKASEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG ++ D + + +D + K ++ I + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYDDNWQHLDQNIDFYYVKGQLTNIFIALGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|30316289|sp|Q9CC16|SYFB_MYCLE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 835 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 249/878 (28%), Positives = 413/878 (47%), Gaps = 117/878 (13%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL + + D DVS + TL IG E+E++ + P T+ +V +E Sbjct: 1 MRVPYSWLCEVVTVGAPDWDVSASDLKQTLVRIGHEIEEMITVGPVDGPLTVGRVTDIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C + D G Q+ +++CGA N VG L V A PG+ +P+ I + Sbjct: 61 LTGFKKPIRACVV---DVGDGQQHEIICGATNFVVGDLVVVAFPGTTLPDGFAIAAC-ET 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL LS D + I+ LP + G +D L L D + +++TP+R C Sbjct: 117 YGRHSAGMICSAAELRLSTDHSGILVLPPGTALPGADGADVLGLDDVVFRLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIKFDLDDSSLCK--GFAMCCVKGV 225 + VRG+A ++ A ++ P S +++P L + ++ G C ++ V Sbjct: 177 MSVRGLAREIACA-----YDLAFVDPASDQAVPPLPVGGQAWPVTVQPETGVRRCALRPV 231 Query: 226 RN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 V+P W+++RL G+R+IS VD+TNYV L+ G+P H D +RI+ TVR A Sbjct: 232 TGIDFAAVSPWWLQRRLLLSGIRAISPAVDVTNYVMLELGHPLHAHDRNRITGGFTVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE I+ +D E L P +V+I + +I G++G ++TDVL+E A+WDP Sbjct: 292 RPGETIVTIDGIERQLDPVDVLIVDNVTTAAIGGVMGAASTEVRSDSTDVLLEAAVWDPA 351 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD----------- 390 ++ + + L + +++ R+ER VD + L L+ + GGT S+ Sbjct: 352 RVSHTQRRLHLPSEAARRYERAVDPAISVAALDRCAMLLADIAGGTVSETLTDWRGSPPR 411 Query: 391 -------ICIARNITYKPRKIVF-MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF 442 I IA ++ + +V+ + KRL+ I + D +V E Sbjct: 412 ADWSLPPIRIAVDLPDRIAGVVYNQGATTKRLTQIGAVVVD----------TVSSEGHTL 461 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRV 501 V+ PSWR D+ + +DLVEE+LR+ G++ I+S PL R L+ Q R R + +V Sbjct: 462 TVTPPSWRPDLLQPSDLVEEVLRLEGLEVIRSVRPL----APAGRGLTAVQKRYRAIGKV 517 Query: 502 LASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKAT 556 LA +E++ F+ + L+G + +LNP+ ++ + T+LLP LL+A Sbjct: 518 LAQSGYVEILPTPFLPADVFDLWGLPADDPRRTTTRVLNPLESNRPQLATTLLPALLEAL 577 Query: 557 GRNVDRAIADFAIFEVSHVYE--------------------------NDTPEGQKYMA-- 588 NV R I D A+F ++ V E P +++A Sbjct: 578 VSNVSRGIIDVALFAIAQVVEPTEWTGGIGSIPVDRRLTDAEIALLDASLPRQPQHVAAV 637 Query: 589 -AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+R+ G G GRL D F +A+ +I +D F + Sbjct: 638 LAGLRE-PRGPWGPGRL--------AEASDAF----EAVRIIARVSGVDVF-FRAVQYLP 683 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR + E +G+ G+ HP +++ GL IC E+ L ++PI + Sbjct: 684 WHPGRCAEVFV-GETPIGHAGQLHPAVIERAGLPKGICAIELDLAAMPIVEGLPAP---- 738 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V +D++ +V +PA + + I++ L++D+ +FDVF G +GE KS+ Sbjct: 739 -QVSPFPAVLQDVSLVVSTQVPAQEVQDAIRDGAGELLEDIQLFDVFTGSQIGEDCKSLT 797 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +DD D V + ++ A LR+ Sbjct: 798 FALRFRAPDRTLTEDDASAARDAAVRHAAERVGATLRT 835 >gi|309803170|ref|ZP_07697267.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] gi|308164678|gb|EFO66928.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus iners LactinV 11V1-d] Length = 804 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 225/825 (27%), Positives = 407/825 (49%), Gaps = 43/825 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WLKD LD D+ ++ + +T G+E+ V + + L + VL+ + Sbjct: 1 MLVSYNWLKDFLDLDIEPNELAEKITRTGVEIADVIHPQSGLKKIVVGHVLTCDIVEGTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + +++ G+ + +Q+VCGAPN+ G + A G+ I N I KIRGI+S GM+C Sbjct: 61 LHVTKVNVGEAEPLQIVCGAPNIAAGQKVIVALHGARIAGNEKI-KRGKIRGIQSEGMIC 119 Query: 120 SEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +E+ D + + + D G + + L + D I+D +TPNR+D + + Sbjct: 120 GLQEIGFDDKVVPAKYANGIFVFDEDTDVQPGDDIYEALGMDDYILDFDITPNRADTLSM 179 Query: 172 RGIALDLVAA--GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 G A ++ A K++EI++ + L++ D L F + + G++ Sbjct: 180 EGAAYEVGAIIDQTPKIEEISLKSDGKDWTNSLKVSVD---PELATKFYLRKITGIKICS 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P WM++RL G+R I+ +VD+TNYV L G P HV+DA+ S+ +L VRRA + E + Sbjct: 237 SPLWMQRRLWNAGIRPINNVVDVTNYVMLLTGQPLHVYDATTFSNGLLEVRRAHASETLQ 296 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+++ +L +++VI + +AG++GGK + D TTD+++E A+++ + +S Sbjct: 297 LLNDKSVELDENDIVITDGNKPVMLAGVMGGKTSEVTDQTTDIILESAIFNGSLVRKSAL 356 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL--SLCGGTASDICIARNITYKPRKIVF 406 T++ RFE+GV+ + L I +L+L + G + I + +P I Sbjct: 357 RHANRTEASSRFEKGVNSDNTMKALD-IAALLLRNNTDGTILNGIIKGIDKIAEPVNIRT 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + + G ++ D ++I +RL F + D+ V+VP R D+ ADLVEE+ RI Sbjct: 416 TISYINKTLGTNLKDHDIIKIFDRLNFPIKVNGDELVVNVPHRRWDISIAADLVEEVGRI 475 Query: 467 YGVDQ-IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG D I ++PL E S +S R +K+++ + M+E +++S + E++ + Sbjct: 476 YGYDNLISTQPL---LAETHGGYSPTESIIRRIKKIIQGQGMLEAISYSLTTLEKATSYA 532 Query: 526 GGQR-ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 + ++I P++ S MR +L+ GLL A N+ R ++ I+E VY D Sbjct: 533 LNPKPTVKIAMPLNTSRSVMRQNLICGLLDAAAYNMARNQSNIGIYEQGRVYYKDDGNYI 592 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFE 641 +++AA SG ++ D + + +D + K ++ I + L + ++ Sbjct: 593 EHEHIAALY---------SGNIYDDNWQHLDQNIDFYYVKGQLTNIFIALGLDLHDIVYK 643 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HPNILDFFGL-SNPICGFEVYLDSIPISQK 699 + HP R+ I + LG G H + L N I +E+ LD + Sbjct: 644 AENIKGMHPTRTAAIYLKNK-YLGMIGMLSHEELYSEKALRGNEIYVYELDLDVLIPEIS 702 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV-NIIKNVDRLIDDVTVFDVFQGKSL 758 K K + + RDL+ ++D HI ++ NI N + + D+ V DV++G + Sbjct: 703 KGVTAKSAPKFPA---INRDLSLLIDAHITNDAIISNIKANAGKYLTDIKVIDVYEGSQI 759 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A + + K+T D+ + + + I N+ + AV+R Sbjct: 760 EAGKKSIAYSLTFRNEKETLTDEVVSLAIAEITHNLESELGAVVR 804 >gi|15827735|ref|NP_301998.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium leprae TN] gi|221230212|ref|YP_002503628.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium leprae Br4923] gi|13093287|emb|CAC30353.1| phenylalanyl-tRNA synthase [beta] subunit [Mycobacterium leprae] gi|219933319|emb|CAR71497.1| phenylalanyl-tRNA synthase [beta] subunit [Mycobacterium leprae Br4923] Length = 836 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 249/878 (28%), Positives = 413/878 (47%), Gaps = 117/878 (13%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL + + D DVS + TL IG E+E++ + P T+ +V +E Sbjct: 2 MRVPYSWLCEVVTVGAPDWDVSASDLKQTLVRIGHEIEEMITVGPVDGPLTVGRVTDIEE 61 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C + D G Q+ +++CGA N VG L V A PG+ +P+ I + Sbjct: 62 LTGFKKPIRACVV---DVGDGQQHEIICGATNFVVGDLVVVAFPGTTLPDGFAIAAC-ET 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL LS D + I+ LP + G +D L L D + +++TP+R C Sbjct: 118 YGRHSAGMICSAAELRLSTDHSGILVLPPGTALPGADGADVLGLDDVVFRLAITPDRGYC 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIKFDLDDSSLCK--GFAMCCVKGV 225 + VRG+A ++ A ++ P S +++P L + ++ G C ++ V Sbjct: 178 MSVRGLAREIACA-----YDLAFVDPASDQAVPPLPVGGQAWPVTVQPETGVRRCALRPV 232 Query: 226 RN----NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 V+P W+++RL G+R+IS VD+TNYV L+ G+P H D +RI+ TVR A Sbjct: 233 TGIDFAAVSPWWLQRRLLLSGIRAISPAVDVTNYVMLELGHPLHAHDRNRITGGFTVRFA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE I+ +D E L P +V+I + +I G++G ++TDVL+E A+WDP Sbjct: 293 RPGETIVTIDGIERQLDPVDVLIVDNVTTAAIGGVMGAASTEVRSDSTDVLLEAAVWDPA 352 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD----------- 390 ++ + + L + +++ R+ER VD + L L+ + GGT S+ Sbjct: 353 RVSHTQRRLHLPSEAARRYERAVDPAISVAALDRCAMLLADIAGGTVSETLTDWRGSPPR 412 Query: 391 -------ICIARNITYKPRKIVF-MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF 442 I IA ++ + +V+ + KRL+ I + D +V E Sbjct: 413 ADWSLPPIRIAVDLPDRIAGVVYNQGATTKRLTQIGAVVVD----------TVSSEGHTL 462 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRV 501 V+ PSWR D+ + +DLVEE+LR+ G++ I+S PL R L+ Q R R + +V Sbjct: 463 TVTPPSWRPDLLQPSDLVEEVLRLEGLEVIRSVRPL----APAGRGLTAVQKRYRAIGKV 518 Query: 502 LASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKAT 556 LA +E++ F+ + L+G + +LNP+ ++ + T+LLP LL+A Sbjct: 519 LAQSGYVEILPTPFLPADVFDLWGLPADDPRRTTTRVLNPLESNRPQLATTLLPALLEAL 578 Query: 557 GRNVDRAIADFAIFEVSHVYE--------------------------NDTPEGQKYMA-- 588 NV R I D A+F ++ V E P +++A Sbjct: 579 VSNVSRGIIDVALFAIAQVVEPTEWTGGIGSIPVDRRLTDAEIALLDASLPRQPQHVAAV 638 Query: 589 -AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 AG+R+ G G GRL D F +A+ +I +D F + Sbjct: 639 LAGLRE-PRGPWGPGRL--------AEASDAF----EAVRIIARVSGVDVF-FRAVQYLP 684 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR + E +G+ G+ HP +++ GL IC E+ L ++PI + Sbjct: 685 WHPGRCAEVFV-GETPIGHAGQLHPAVIERAGLPKGICAIELDLAAMPIVEGLPAP---- 739 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V +D++ +V +PA + + I++ L++D+ +FDVF G +GE KS+ Sbjct: 740 -QVSPFPAVLQDVSLVVSTQVPAQEVQDAIRDGAGELLEDIQLFDVFTGSQIGEDCKSLT 798 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +DD D V + ++ A LR+ Sbjct: 799 FALRFRAPDRTLTEDDASAARDAAVRHAAERVGATLRT 836 >gi|295110192|emb|CBL24145.1| phenylalanyl-tRNA synthetase beta subunit [Ruminococcus obeum A2-162] Length = 805 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 241/853 (28%), Positives = 392/853 (45%), Gaps = 114/853 (13%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M ++SW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSMSWIKMYVPDLDVTAQEYTDAMTLSGTKVEGFEKLDADLDKIVIGQIEKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPG--SCIPENNMIVNVRKI 109 D I+ +++ G + +Q+V GAPNV+ G L G G + + + K+ Sbjct: 61 DKLIICQVNIGT-ETVQIVTGAPNVKEGDKVPVVLDGGRVAGGHDGKMTSGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL S + I DA VG L L D +I+ +T Sbjct: 120 RGVESCGMMCSIEELGSSREMYPEAPEYGIYIFSEDAVVGESAIKALGLDDVVIEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC GV GIA + A K + + E IK ++D LC + VK Sbjct: 180 NRVDCYGVLGIAREAAATFNKKFIPPVVKETGNDEKASDYIKVTVEDPELCPRYTARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRAC 282 V+ +P WM++ L + G+R I+ LVDITNYV + G P H +D I + VRRA Sbjct: 240 NVKIGPSPKWMQRCLASNGIRPINNLVDITNYVMEEYGQPMHAYDLDTIEGREIIVRRAK 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GEK + LD QE ++ D V++ DGR IAGI+GG+++ DN VL E A ++ Sbjct: 300 AGEKFVTLDGQEREMD-DRVLMICDGRKAVGIAGIMGGENSMITDNVHTVLFEAACFNGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNI 397 NI S K +G+ TD+ +FE+G+D + L+ L G DIC N Sbjct: 359 NIRLSSKRIGLRTDASGKFEKGLDPNNAKAAIDRACQLMEELGAGEVVGGCVDIC---NE 415 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 +P ++ F + L G D+ E+ L L ++ ++ E + E+ P++RQD+ A Sbjct: 416 VREPSRVPFEPERINALLGTDLTKEEMLAYLAKVELTLDPETN--EIVAPTFRQDIHCMA 473 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFI 516 D+ EE+ R +G D+I P L E + R V R +A E + +SF Sbjct: 474 DVAEEVARFFGYDKI---PTTLPNGEATTGKLPFKLRIENVARDIAEYCGFSEGMTYSFE 530 Query: 517 S---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 S + S L ++ + I NP+ D S MRT+ L G+L + N +R Sbjct: 531 SPKVFDKLRIPQDSDL----RKVITISNPLGEDYSIMRTTTLHGMLSSLATNYNRRNKGV 586 Query: 568 AIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 ++E+ VY + P+ + + G+ G+G D FD Sbjct: 587 RLYEIGKVYLPKALPLTELPDERTHFTLGMY-------GAG--------------DFFDM 625 Query: 622 KADALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 K V+E F ++ + ++ HPGR I ++V GY GE HP + D Sbjct: 626 KG----VVEEFFEKSGMKKKVHYTPDSNKTYLHPGRQASISYEGKVV-GYLGEVHPIVAD 680 Query: 677 FFGLSN-------------PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 +G+ CGF K ++ V RDL+ + Sbjct: 681 NYGIGERTYVAVIDILDILEFCGF----------------NHKFSGIAKYPAVTRDLSMV 724 Query: 724 VDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 V +H+ AG + ++++ ++++ +FD+++G + G KS+A V+ + T + + Sbjct: 725 VPKHVLAGQIEDVLEQRGGKILESYQLFDIYEGAQIKSGYKSMAYSVVFRDHDKTLEEAE 784 Query: 783 IRILMDRIVENVV 795 I M +I+ + Sbjct: 785 ITAAMKKILNGLT 797 >gi|225390498|ref|ZP_03760222.1| hypothetical protein CLOSTASPAR_04253 [Clostridium asparagiforme DSM 15981] gi|225043427|gb|EEG53673.1| hypothetical protein CLOSTASPAR_04253 [Clostridium asparagiforme DSM 15981] Length = 807 Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 235/832 (28%), Positives = 402/832 (48%), Gaps = 78/832 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ ++ D +T G +VE + + L + ++ S+ER+PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGFERLDKNLEKIVVGQIRSIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G + +Q+V GAPNV+ G L G G +PE+ + + K Sbjct: 61 DKLIVCQVDIGAGEPVQIVTGAPNVKTGDKVPVVLDGGKVAGGHDGGPLPEDGIEIKKGK 120 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RGIES GMMCS +EL D + I LP D VG + L L D + + +T Sbjct: 121 LRGIESNGMMCSIEELGSDRDMYPLAPESGIYILPEDTRVGADAVEVLGLRDVVFEYEIT 180 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCC 221 NR DC V GIA + AA GK + P ++E I +K +++ LC + Sbjct: 181 SNRVDCYSVVGIARE-AAATFGKEFHPPVVKPTGNNEDINDYLKVRVENPELCPRYCARM 239 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRR 280 VK ++ +P WM++RL A G+R I+ +VDITNYV + G P H FD ++ + V+ Sbjct: 240 VKNIKLAPSPEWMQRRLAASGIRPINNIVDITNYVMEEYGQPMHAFDYDTLAGHEIVVKC 299 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A G+ LD QE L +++ +DG + IAGI+GG+++ D+ + ++ E A ++ Sbjct: 300 AKDGDVFQTLDGQERKLD-GTILMINDGEKEVGIAGIMGGENSKITDSVSTMVFESACFN 358 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNIT 398 NI S K +G+ TD+ ++E+G+D + LI L G I + Sbjct: 359 GTNIRLSAKKVGLRTDASGKYEKGLDPNTAKEAVNRACQLIEELGAGEVIGGIIDIYSQK 418 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILER---LGFSVIGEYDKFEVSVPSWRQDVEE 455 + ++ F ++ RL G D+ ED++ R LG+ + EV VP+WRQD+ Sbjct: 419 REENRVPFDPEKINRLLGTDI-AEDTMISYFRKIDLGYDPCSK----EVIVPTWRQDLYR 473 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWS 514 ADL EE+ R YG D+I P L E + R + V R A + + +S Sbjct: 474 MADLAEEVARFYGYDKI---PTTLPSGEATTGKLPYELRIQEVARETAEFCGFSQGMTYS 530 Query: 515 FISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F S ++ +R +EI NP+ D S MRT+ L G+L + N +R D + Sbjct: 531 FESPRVFDKLMIPADSRLRRTVEISNPLGEDFSVMRTTPLNGMLTSLSTNYNRRNKDVRL 590 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS-- 627 +E+++VY P+ ++ +ER +F + D + Sbjct: 591 YEMANVY---LPKAMP-------------------LTELPDERMQFTLGMYGEGDFFTMK 628 Query: 628 -VIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 V+E F + + +G + HPGR I + +GY GE HP++ D + + Sbjct: 629 GVVEEFFDRVGMNKKPHYDPNGDHPYLHPGRKADIVYEG-VTVGYLGELHPDVADNYKIG 687 Query: 682 NPICGFEVYLDS-IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 + + + S IP + T +K ++ V RD++ +V +++ G + ++I+ Sbjct: 688 DRAYVAVIDMPSVIPFT----TFDRKYTGIAKFPAVTRDISMVVPKNVLVGQIEDVIEQR 743 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 ++++ +FD+++G + G KSVA + ++ T + ++ +M++I+ Sbjct: 744 GGKVLESYNLFDIYEGAQVLAGHKSVAYSITLRAKDHTLEEKEVTSVMNKIL 795 >gi|291548891|emb|CBL25153.1| phenylalanyl-tRNA synthetase beta subunit [Ruminococcus torques L2-14] Length = 806 Score = 284 bits (726), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 226/833 (27%), Positives = 389/833 (46%), Gaps = 81/833 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L + ++ +E++PD Sbjct: 1 MDTSLSWIKAYVPDLDVTAQEYTDAMTLTGTKVEGFEELDADLDKIVVGQIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG-----LLGVWAPPGSCIPENNMIVNVR----K 108 D + +++ G + IQ+V GA NV G +L G P + ++ K Sbjct: 61 DKLVVCQVNIGA-EVIQIVTGAKNVFEGAKVPVVLDGGRVAGGHEPGQRVAGGIKIKKGK 119 Query: 109 IRGIESTGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ S GMMCS KE+ I P D VG + L L D + + +T Sbjct: 120 LRGVPSYGMMCSIEELGSTKEMYPEQPENGIYIFPEDTEVGADAVELLGLHDVVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A + K ++ + E + +K ++++ LC + V Sbjct: 180 SNRVDCYSVVGIAREAAATFNKEFKPPVVTETGNDEDVNDYVKVTVENTDLCSRYCARAV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P W+++RL +VG+R I+ LVDITNYV + G P H +D ++ + V+ A Sbjct: 240 KNIKIGPSPKWLQRRLSSVGIRPINNLVDITNYVMEEYGQPMHAYDLDTLAGHQIVVKNA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GEK + LD QE + D ++I + IAGI+GG+++ DN +L E A +D + Sbjct: 300 QDGEKFVTLDGQERTMDKDVLMICDGEKAVGIAGIMGGENSMITDNAKTMLFEAACFDGV 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI +S K +G+ TD+ +FE+G+D + L L+ L G I + + Sbjct: 360 NIRKSSKRVGLRTDASGKFEKGLDPNNAMAALNRACQLVEELGAGEVVGGAIDVYSKKKE 419 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P ++ F ++ R+ G ++ ED L +++ E EV P++R D+ ADL Sbjct: 420 PVRVPFDAEKINRMLGTNISEEDMLGYFKKIDLDYDAETK--EVIAPTFRHDLFRLADLA 477 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 EE+ R +G D I + LP + + L ++Q + + S+ M ++SF S Sbjct: 478 EEVARFFGYDNIPT-TLPSGEATTGKLPFKLRIEQVASDIAEFCGFSQGM----SYSFES 532 Query: 518 ---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E S L + + I+NP+ D S MRT+ L G+L + N +R + Sbjct: 533 PKVFDKLLLPEDSKL----RNAISIMNPLGEDYSIMRTTSLNGMLTSLATNYNRRNKNVR 588 Query: 569 IFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E+ ++Y + P ++ +ER +F D F+ Sbjct: 589 LYEMGNIYIPQELP-----------------------LTELPDERMQFTLGMYGDGDFFN 625 Query: 621 AKADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 K E +++ A S+ HPGR I ++V GY GE HP + D +G Sbjct: 626 MKGVVEEFFEKIGMKGREKYDPNAGKSFLHPGRQANIIYDGKVV-GYLGEVHPEVADIYG 684 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-K 738 + + LD +P T +K ++ V RD++ +V + I G + ++I K Sbjct: 685 IGER--AYVAVLD-MPEIIPYATFDRKYTGIAKYPAVTRDISMVVPKEILVGQIEDVIEK 741 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 ++ +FD+++G + G KSVA ++ + T + +I MDRI+ Sbjct: 742 KGGAHLESFNLFDIYEGAQIKAGFKSVAYSIVFRAKDKTLEEAEITAAMDRIL 794 >gi|225569106|ref|ZP_03778131.1| hypothetical protein CLOHYLEM_05186 [Clostridium hylemonae DSM 15053] gi|225161905|gb|EEG74524.1| hypothetical protein CLOHYLEM_05186 [Clostridium hylemonae DSM 15053] Length = 806 Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 230/830 (27%), Positives = 393/830 (47%), Gaps = 73/830 (8%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ + ++ D +T G +VE + +A L + ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPGLEADAQEYTDAMTLSGTKVEGYEELDADLDKIIVGQIDKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG-----LLGVWAPPGSCIPENNMIVNVR----K 108 D I+ +++ G +Q+V GA NV+ G +L G P + ++ K Sbjct: 61 DKLIICQVNIGDGS-VQIVTGASNVQEGDKVPVVLAGGRVAGGHEPGTRVAGGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS +EL + D I +A G + L L D + + +T Sbjct: 120 LRGVESDGMMCSIEELGSNRDMYPEAPEEGIYIFSEEAEPGADAVELLGLHDVVFEYEVT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A + + + E + IK + ++ LC + V Sbjct: 180 SNRVDCYSVIGIAREAAATFGKEFVPPEVKATGNEEDVNDYIKVTVKNTDLCPRYCARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 K ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I D + VR A Sbjct: 240 KNIKIGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIEDREIIVRTA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 + EK LD QE + ++I + IAGI+GG+++ D+ +L E A +D Sbjct: 300 GADEKFTTLDGQERQMDESVLMICDGQKSIGIAGIMGGENSMITDDVKTMLFEAACFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYK 400 NI +S K +G+ TD+ +FE+G+D + L+ L G I + Sbjct: 360 NIRKSSKKVGLRTDASGKFEKGLDPNNAQAAIDRACQLVEELGAGEVVGGIVDVYGKKKE 419 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 P ++ F E+ L G D+ ED +R L+R+ +I + E+ P++R D+ ADL Sbjct: 420 PVRVPFDADEINALLGTDISREDMIRYLKRV--DLIYDETSGEIIAPTFRHDIFRMADLA 477 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 EE+ R YG D I + LP + + LS + + V + +N+SF S + Sbjct: 478 EEVARFYGYDNIPT-TLPHGEATTGK-LSFKLRVEEVARDVAEFCGFSQGMNYSFESPKV 535 Query: 520 --------QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S L + +EI+NP+ D S MRT+ L G+L + N +R + ++E Sbjct: 536 FDKLMIPADSPL----RNTVEIMNPLGEDYSIMRTTPLNGMLTSLATNYNRRNKNVRLYE 591 Query: 572 VSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 + ++Y + PE + G+ G G +S K V+ F KA Sbjct: 592 LGNIYLPKSLPPTELPEERMQFTLGMY-------GDGDFFSMKG-----VVEEFFEKAG- 638 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 ++ R ++G P + HPGR I V GY GE HP++ D +G+ Sbjct: 639 ------LHKKETYRPDAGRP-YLHPGRQADIFYDGTRV-GYIGEVHPDVADTYGI----- 685 Query: 686 GFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR 742 G + Y+ I + + ++ T +K ++ V RD++ ++ + I AG + +I+N Sbjct: 686 GEKAYIAVIDMPEIVERATFDRKYTGIARFPAVTRDISMVMPKEILAGQIEEVIENKGGS 745 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 ++ +FD+++G + +G KSVA ++ + T D ++ M+RI++ Sbjct: 746 YLESYALFDLYEGAQIKQGYKSVAYSIVFRAKDKTLEDAEVSEAMNRILK 795 >gi|225573602|ref|ZP_03782357.1| hypothetical protein RUMHYD_01796 [Blautia hydrogenotrophica DSM 10507] gi|225039041|gb|EEG49287.1| hypothetical protein RUMHYD_01796 [Blautia hydrogenotrophica DSM 10507] Length = 797 Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 234/816 (28%), Positives = 386/816 (47%), Gaps = 74/816 (9%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 D DV ++ D +T G +VE + +A L I ++ +E++PD D + +++ G Sbjct: 7 DLDVDPQEYTDAMTLTGTKVEGYERTDADLDKIVIGQIDKIEQHPDADKLVVCQVNIGT- 65 Query: 71 QEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 + IQ+V GAPN++ G L G + G P + + K+RG+ES GMMCS Sbjct: 66 ETIQIVTGAPNIKEGDKVPVVLDGGRVAGSHDGKMTP-GGIEIRKGKLRGVESNGMMCSI 124 Query: 122 KELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 +EL + D I P DA VG + L L D I + +T NR DC GIA Sbjct: 125 EELGSTRDMYPEAPEYGIYIFPEDAQVGEDAVEALGLRDVIFEYEITSNRVDCYSALGIA 184 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A K I + E +K ++D LC +A VK V+ +P WM+ Sbjct: 185 REAAATFNKKFCPPKIVETGNDEKTSDYVKVTVEDPDLCPRYAARVVKNVKIGPSPKWMQ 244 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 + L + G+RSI+ LVDITNY+ + G P H +D +I + V+RA GEK + LD QE Sbjct: 245 RALASNGIRSINNLVDITNYIMEEYGQPMHAYDLDKIDGSHIVVKRAKQGEKFVTLDGQE 304 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 + L ++I + + IAGI+GG+++ D VL E A ++ +NI +S K LG +T Sbjct: 305 HVLDDSILMICDENKPVGIAGIMGGENSMITDEVKTVLFEGACFNGVNIRKSSKKLGHVT 364 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNITYKPRKIVFMNSE 410 D+ +FE+G+D + + L+ L G D+C +P K+ F + Sbjct: 365 DASSKFEKGLDPNTALEAVNRACQLMEELGAGEVIGGVVDVCYEHK---EPWKVPFEPDK 421 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + L GID+ E+ L LER+ + + K + VP++RQDV ADL EE+ R YG D Sbjct: 422 INALIGIDISAEEMLGYLERV--ELYPDETKENIIVPTFRQDVHCTADLAEEVARFYGYD 479 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-- 528 +I P + E L + + + V + + +SF E +F + Sbjct: 480 KI---PSTIPSSELTGFLPFCRKIEKVAQDVAEYCGFSQAMTYSF---ESPKVFDKLRLD 533 Query: 529 ------RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTP 581 + ++I NP+ D S M+T L G+L + N R D ++E++ VY P Sbjct: 534 ADDPLRQAVKIRNPLGEDFSIMKTLPLNGMLSSLETNYRRRNKDVRLYELAKVYLPKSLP 593 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +A + + G+ G G ++ K V E F ++ + Sbjct: 594 LTE--LADERVELTLGMYGEGDFYTMK------------------GVCEEFFEKVGMKKK 633 Query: 642 -SGAP----SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 S AP ++ HPGR + + LGY GE HP + + +G+ + V + IP Sbjct: 634 VSYAPNSGKNYLHPGRQANVYYDGRL-LGYLGEVHPLVAESYGMKTRVY---VAVIDIPT 689 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQG 755 + T K L+ V RD++ +V +++ AG + I++ ++++ +FD+++G Sbjct: 690 VIELATFDYKFEDLTKYPAVLRDISMVVPKNVMAGDIEKILEERGGKILESYELFDIYEG 749 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + EG KS+A ++ + T D D+ M +I+ Sbjct: 750 NQIKEGFKSMAYSIVFRSKDRTLEDADVTAAMKKIL 785 >gi|225012819|ref|ZP_03703253.1| phenylalanyl-tRNA synthetase, beta subunit [Flavobacteria bacterium MS024-2A] gi|225003093|gb|EEG41069.1| phenylalanyl-tRNA synthetase, beta subunit [Flavobacteria bacterium MS024-2A] Length = 791 Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 233/822 (28%), Positives = 390/822 (47%), Gaps = 61/822 (7%) Query: 12 LDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNPDLD-CAILRID 66 + T++ +E+I LT +GLEVE + E+ L + +VLS E++P+ D ++ Sbjct: 1 MTTELPIEQISVLLTDLGLEVEGTHHFESIKGGLKGVLVGEVLSCEQHPNADRLKKTEVN 60 Query: 67 TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTGMMCSEKE 123 G + + +VCGAPNV G + A G+ + ++ + +N KIRG S GM+C+E E Sbjct: 61 LGNDEIVPIVCGAPNVAKGQKVLVATVGTTLSMSDGTSLKINKSKIRGEVSMGMICAEDE 120 Query: 124 LMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGVRGIALDLVAAG 182 L L + IM L G + E+ D + ++ LTPNR+D + G+A DL A Sbjct: 121 LGLGESHDGIMVLDETLEPGTEAASLFEVEEDYVFEIGLTPNRADAMSHMGVARDLKAIC 180 Query: 183 LGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 + K + P ++ ++ I D+ + C + + G+ +P W++ RL Sbjct: 181 MLKNIPFEWTLPETTSFNIDNNQSAINVDVKNGDKCSQYYGLTISGITVAPSPTWLQNRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+G+ + +VD+TNYV + G P H FDA +I + V+ LD + +L Sbjct: 241 KAIGIGPKNNVVDVTNYVLHELGQPLHAFDAQKIDGDILVKTCSDKTSFTTLDGNKRELH 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 ++++I + IAGI GG +G + TT + +E A +DP++I ++ K G+ TD+ + Sbjct: 301 HEDLMICDSQKPLCIAGIFGGLDSGVTEQTTSLFLESAYFDPVSIRKTAKRHGLNTDASF 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRLSGI 417 RFERG+D + I LK LI + GG S+I +P +I +++ G Sbjct: 361 RFERGIDPEIGITALKRAAILIKKIAGGEITSEIQDFSKPLEEPSQIFLGLDVLEQTIGQ 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + +D IL L ++ + +++P +R DV AD++EEILR+YG + ++ +P Sbjct: 421 TIQQKDLNTILNALEININNVSETGIGMTIPRYRVDVNRPADVIEEILRVYGYNNLEDKP 480 Query: 477 L-----PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 L P +D L V + L +E +N S S E S F + Sbjct: 481 LKYEANPPYSWKDPHKLEAT------VAQKLIGHGYIETINNSLTSPEFSADF---HAPI 531 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAA 589 +LNP+ ++S MR SL+ L+ N++R + IFE +Y +NDT K ++ Sbjct: 532 TLLNPLGKELSLMRQSLVFNALEVVSFNLNRQNKNLKIFEFGAIYGKKNDTFVEAKRLS- 590 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 I G ++ + F K ++E LD L ++ + H Sbjct: 591 --------ITLVGNVFESHWDMAKALNKFFYGKGVIQDILESIGLLD-LEWQ----ALPH 637 Query: 650 PGRSGIIKTSA-EIVLGYFGEFHPNILDFFGLSNPICGFEVYL------DSIPISQKKRT 702 P + S + LG FG ++D FG+ EVY+ D I +S + Sbjct: 638 PHFDEAFEISYRKKHLGVFGLISKKLIDSFGIDQ-----EVYMADLNWGDLIELSYSEPL 692 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEG 761 K +V S V+RD A ++D ++ L DR ++ +V +FDV+QGK+L +G Sbjct: 693 KYNEV---SKFPLVRRDFALLIDDNVHFEVLKETALKTDRKILKEVRLFDVYQGKNLEKG 749 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS + Q T D + +MD++ +N K+ A LR Sbjct: 750 KKSYGLSFTFQDNAKTLTDKQVDKVMDKLKQNFEKEFGAQLR 791 >gi|86141561|ref|ZP_01060107.1| phenylalanyl-tRNA synthetase beta chain [Leeuwenhoekiella blandensis MED217] gi|85832120|gb|EAQ50575.1| phenylalanyl-tRNA synthetase beta chain [Leeuwenhoekiella blandensis MED217] Length = 808 Score = 283 bits (725), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 233/839 (27%), Positives = 409/839 (48%), Gaps = 67/839 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 M+ + +WLK ++ D EK + LT +GLEVE ++ ++ L + VL+ ++P Sbjct: 1 MQISYNWLKQFINIDWDAEKTGNLLTDLGLEVEGIEPFQSVKGGLKGIVVGHVLTCVKHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + +D G + +Q+VCGAPNV G A G+ + ++ + KIRG Sbjct: 61 NADRLKLTTVDLGDGEPVQIVCGAPNVDAGQKVPVATVGTTLYDDKGEPWKIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII-DVSLTPNRSDCIGV 171 S GM+C+E EL L + IM L D G L++ E+ D I+ ++ LTPNRSD + Sbjct: 121 VSNGMICAEDELGLGESHDGIMILEEDLKPGTPLAEIFEIEDDIVFEIGLTPNRSDAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 G A DL A + P +S ++ +I + ++ + + G+ Sbjct: 181 MGTARDLRAGLIQSGVHPEFITPSTSSFRIDNRMQKISVQVLNNEKAPRYCGITLSGLTI 240 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ RLKA+GL + +VDITNYV + G P H FD ++I+ + V+ +G K Sbjct: 241 KESPAWIQNRLKAIGLTPKNNVVDITNYVLHELGQPLHAFDMAKIAGKEINVKTVAAGTK 300 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 LD E +L ++++I + IAG+ GG+++G + TT + +E A +DP+++ ++ Sbjct: 301 FTTLDGIERELHEEDLMICDAEKPLCIAGVFGGENSGVTEGTTSIFLESAYFDPVSVRKT 360 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKI- 404 K G+ TD+ +RFERG+D L V LI GG SD+ + + P+KI Sbjct: 361 AKRHGLNTDASFRFERGIDPNITEYALIRAVLLIQECAGGEVTSDV-----VDFYPKKIE 415 Query: 405 ---VFMNSE-VKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKAD 458 V +N + ++L G +P E IL L + I E +++P++R DV + D Sbjct: 416 DHQVVLNFDRAEKLIGEAIPKETIKSILSSLDIKINNITE-SGIGMTIPAYRNDVTREVD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR--------VLASRAMMEV 510 ++EEILR+YG ++I Q + K N S+ +S +R+ +LAS E+ Sbjct: 475 VIEEILRVYGYNKI--------QFKSKLNASVSKS-SRFADHKIQQVTGNLLASLGFNEI 525 Query: 511 VNWSFISKEQSVLFGGGQRELEI--LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 +N S + + L + + + LNP+S D+S MR SLL L+ N +R D Sbjct: 526 LNNSLTTPVYASLNDAFKEDYNVTMLNPLSTDLSVMRQSLLFSGLEVVAFNSNRRQPDLK 585 Query: 569 IFEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE Y N E K++ + SG+ ++ ++ + F+ K + Sbjct: 586 LFEFGKSYHNFPGGREEHKHLTLLL---------SGKQNAENWFQQQQNTTFFNLKGNVE 636 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 +V+ + + + + + + G ++ + FG I + F + + Sbjct: 637 AVLSR-LGIAQWKVKPLKDAQFSEGLEYSVQKKQVVS---FGLVSKAIRNHFDIEQEVLY 692 Query: 687 FEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLI 744 + D+I + Q+ + K + + V+RD A ++DQ + + V+ +L+ Sbjct: 693 ADFNWDTILDLVQQNKIKFAPIPKNPA---VRRDFALLLDQEVTFDQIYQEAYMVEKKLL 749 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FDV++G++L EGKKS A+ +Q T D +I +M+++ + K NA LR Sbjct: 750 KNVALFDVYEGENLPEGKKSYAVSFTLQDEHKTLTDKEIDKIMNKLQQRFEKSLNAELR 808 >gi|269303470|gb|ACZ33570.1| phenylalanyl-tRNA synthetase, beta subunit [Chlamydophila pneumoniae LPCoLN] Length = 792 Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 227/814 (27%), Positives = 388/814 (47%), Gaps = 61/814 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+ ++ L+ + +S ++I + IG+E E ++N L FT V K+L +P+ Sbjct: 1 MRIPITLLQTYFSEPLSTKEILEACDHIGIEAE-IENT-TLYSFTSVITAKILHTIPHPN 58 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIES 114 D + T +E QVVCGAPN GL+ A PG+ + ++ + K+RG+ES Sbjct: 59 ADKLRVATLTDGAKEHQVVCGAPNCEAGLIVALALPGAKLFDSEGKAYTIKKSKLRGVES 118 Query: 115 TGMMCSEKELMLSD---DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 GM C EL L + +++ELP P+G L+ L + +++SLTPN C + Sbjct: 119 QGMCCGADELGLDELQIQERALLELPEATPLGEDLATVL--GNTSLEISLTPNLGHCASL 176 Query: 172 RGIALDLVAAGLGKLKEINISCP--LSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNN 228 G+A ++ + + N+ P S E++P D+ +D +C F+ + G+ Sbjct: 177 LGLAREIC-----HVTQANLVIPKEFSFENLP-TTALDMGNDPDICPFFSYVVITGISAQ 230 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P +++ L+A+ + I+A+VDITNY+ L G P H +DAS ++ D L V + + E Sbjct: 231 PSPIKLQESLQALKQKPINAIVDITNYIMLSLGQPLHAYDASHVALDSLRVEKLSTPES- 289 Query: 288 LALDNQEYDLSPDNV-VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 L L N E L P V V+ D + + G++G K + TT ++E A + P + S Sbjct: 290 LTLLNGETVLLPSGVPVVRDDHSLLGLGGVMGAKAPSFQETTTTTVIEAAYFLPEALRAS 349 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIV 405 K L I ++S YRF RG+D Q ++P L+ + IL + T S I + I + +++ Sbjct: 350 QKLLPIPSESAYRFTRGIDPQNVVPALQAAIHYILEIFPEATISPIYSSGEICRELKEVA 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++R+ G IE + L+ LGFS + V VPS+R D+ E+ DLVEEI R Sbjct: 410 LRPKTLQRILGKSFSIEILSQKLQSLGFSTTPQETSLLVKVPSYRHDINEEIDLVEEICR 469 Query: 466 IYGVDQIKSEPL----PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 + P+ P+ +++ R R LA+ + E + E + Sbjct: 470 TESWNIETQNPVSCYTPIYKLK------------RETARFLANAGLQEFFTPDLLDPETA 517 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 L + E+ + S + +R+SLLPGLLK+ N++R FE+ VY Sbjct: 518 ALTRKEKEEISLQG--SKHTTVLRSSLLPGLLKSAATNLNRQAPSVQAFEIGTVYAK--- 572 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRF 640 G++Y +G R W K + + K ++ +S+D+L Sbjct: 573 HGEQYQETQTLAILLTEDGESRSWLPKPS-----LSFYSLKGWVEKLLYHHHLSIDALTL 627 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 ES A +HP + G+++ + G+ HP + + +P+ E+ LD + KK Sbjct: 628 ESSALCEFHPYQQGVLRIHKQ-SFATLGQVHPELAKKAQIKHPVFFAELNLDLLCKMLKK 686 Query: 701 RTKTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 TK K ++ SS RDL V + +PA L ++ + ++ VT+ ++Q KS Sbjct: 687 TTKLYKPYAIYPSSF----RDLTLTVPEDMPANLLRQKLLHEGSKWLESVTIISIYQDKS 742 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L K+V+++++ Q + T + DI R+V Sbjct: 743 LETRNKNVSLRLVFQDYERTLSNQDIEEEYCRLV 776 >gi|197303123|ref|ZP_03168168.1| hypothetical protein RUMLAC_01847 [Ruminococcus lactaris ATCC 29176] gi|197297778|gb|EDY32333.1| hypothetical protein RUMLAC_01847 [Ruminococcus lactaris ATCC 29176] Length = 806 Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 227/838 (27%), Positives = 395/838 (47%), Gaps = 85/838 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ + DV+ ++ D +T G +VE + +A L + ++ +E++PD Sbjct: 1 MNTSLSWVKAYVPELDVTAQEYTDAMTLTGTKVEGFEKLDADLDKIVVGQIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG-----LLGVWAPPGSCIPENNMIVNVR----K 108 D I +++ G + +Q+V GA NV G +L G P + ++ K Sbjct: 61 DKLVICQVNVGT-ETVQIVTGATNVFEGAKVPVVLDGGRVAGGHEPGQRVAGGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ S GMMCS +EL + D I D VG + L L D + + +T Sbjct: 120 LRGVPSYGMMCSIEELGSTRDMYPEAPENGIYIFHDDVQVGADAVEVLGLHDVVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A + K ++ ++E + +K +++++LC + V Sbjct: 180 SNRVDCYSVVGIAREAAATFNKEFKPPVVTETGNNEDVNDYVKVSVENTNLCSRYCARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D ++ + V+ A Sbjct: 240 KNIKIGPSPEWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTLAGHQIVVKNA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GEK LD QE + D ++I + IAGI+GG+++ D+ T +L E A +D + Sbjct: 300 AEGEKFTTLDGQERTMDQDVLMICDGEKAVGIAGIMGGENSMITDDVTTMLFEAACFDGV 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNI 397 NI +S K +G+ TD+ +FE+G+D + L L+ + G A D+ + Sbjct: 360 NIRKSSKRVGLRTDASGKFEKGLDPNNAMDALNRACQLVEEMGAGEVVGGAVDVYSKKK- 418 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 +P ++ F +++ R+ G + E+ + +++ E EV P++R D+ A Sbjct: 419 --EPVRVPFDAAKINRMLGTGISEEEMIGYFKKIDLGYDAETK--EVIAPTFRHDLFRIA 474 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFI 516 DL EE+ R YG D I P L E + R V R +A + +++SF Sbjct: 475 DLAEEVARFYGYDNI---PTTLPDGEATTGKLTFKLRIEQVARDIAEFCGFSQGMSYSFE 531 Query: 517 S---------KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 S E S L ++ ++I+NP+ D S MRT+ L G+L + N +R + Sbjct: 532 SPKVFDKLRLPEDSQL----RKTVDIMNPLGEDYSVMRTTSLNGMLTSLATNYNRRNKNV 587 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E+ +VY P+ ++ EER +F D F Sbjct: 588 RLYELGNVY---LPKSLP-------------------LTELPEERMQFTLGMYGDGDFFT 625 Query: 621 AKADALSVIEPFVSLDSLRFESGAPSWY-HPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 K E + +++ A Y HPGR I ++V GY GE HP + D +G Sbjct: 626 MKGVVEEFFEKIGMHEKEKYDPDAGKTYLHPGRQANIIYDGKVV-GYLGEIHPEVADAYG 684 Query: 680 LSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 + G Y+ I + + T +K ++ V RD++ +V + I G + +I Sbjct: 685 I-----GERAYVAVIDMPEILPYATFDRKYTGIAKYPAVTRDISMVVPKKILVGQIEEVI 739 Query: 738 -KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 KN ++ +FD+++G + G KSVA ++ + T + +I M++I++ + Sbjct: 740 EKNGGAHLESYKLFDLYEGAQIKAGFKSVAYSIVFRAKDKTLEEAEITAAMNKILKGL 797 >gi|284929696|ref|YP_003422218.1| phenylalanyl-tRNA synthetase subunit beta [cyanobacterium UCYN-A] gi|284810140|gb|ADB95837.1| phenylalanyl-tRNA synthetase beta subunit [cyanobacterium UCYN-A] Length = 813 Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 231/840 (27%), Positives = 413/840 (49%), Gaps = 63/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK ++ WL++ + + S E++ D LT +GLEV++ +N E ++ + + + +PD Sbjct: 1 MKISVKWLRELTNFNFSHEELADILTVVGLEVDECENLNEWVNGIVVGLIKDCQPHPDAQ 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G + + +VCGA NV +G A GS +P ++ + ++RGI S GM+ Sbjct: 61 KLNICKVDIGVEKLLNIVCGASNVEIGKYVPVATLGSYLPTIDLKIEPTELRGINSEGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS E+ LS +S+ I +A +G ++ L L D I+ V T NR D + + GIA + Sbjct: 121 CSLSEIGLSKESSGIHIFEENALTIGQNVAPLLGLDDVILSVMPTANRPDAMSMIGIARE 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 L + L ++ P ++ E +K ++ D + C + +K +P Sbjct: 181 LAS-----LTGNTVNSPRDIKNFIFEHKNNFLKIEVKDINACPIYIGTIIKNATVTSSPK 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--------LTVRRACSG 284 W++Q+LK G+ I+ +VD+TN V L+ G P H FD +++ + + +R + + Sbjct: 236 WLQQKLKVSGIEPINNIVDVTNLVLLEWGQPMHAFDLKKLNKIADNSNELKIGIRYSNNE 295 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + LD +L+ N++I S+ ++AGI+GGK D+ T D+ +E AL+D + I Sbjct: 296 ETLQILDGSSKELNKKNLIITSNDVPVALAGIMGGKTTEIDNQTQDIFLETALFDQVVIR 355 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN-------- 396 S KN + T++ R+ERGV+ + ++ +SLI L GGTA I N Sbjct: 356 HSSKNQNLRTEASIRYERGVNQFELEIASQNAISLIEELTGGTAVTQSIIDNRSQVNISQ 415 Query: 397 ITYKPRKIVFMNSEVKRLSGID--VPIEDSLRILERLGFSVIGEYDK----FEVSVPSWR 450 IT + ++ + V R G+ + E+ IL+ LG + DK + V VPS+R Sbjct: 416 ITLRLERVHKILGPVWR-DGLKSFITSEEVHNILKNLGCK-LDLTDKISNVWSVVVPSYR 473 Query: 451 -QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 +D+ + DL+EEI RIYG E LP K LS + R ++ S + E Sbjct: 474 YRDLHREIDLIEEIARIYGYGNFCDE-LPYKTEPGK--LSQEYCIERKLREAFRSTGLHE 530 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNV---DRAIAD 566 +V +S + E++ ++ + NP+ + S +R +LL GL+ N +R + Sbjct: 531 LVQYSLVKPEKA--------DIVLANPLLTEYSALRNNLLDGLINTFAYNQSQGNRPLNG 582 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 F I ++ H + E + +GI G+ +EG W+ + + + +K Sbjct: 583 FEIGKIFHSIDGQNRESDR--ISGIMGGTFLVEGR---WTTGG--KVPPMTWYKSKGVLD 635 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 S+ + F + + HP R+ + + + LG FG+ HP I L + G Sbjct: 636 SIFKKFKIIVEYKTHK-EDKRLHPERTASLWLNNKF-LGIFGQLHPQICQELNLIGAVYG 693 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLH-PVKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 FE+ + + + T S + P++ DLAF V IP L+ +K V L+ Sbjct: 694 FELDFQLLLDTLNQETFLTPTFKPYSFYPPIELDLAFFVSLDIPVNQLIQKMKEVGGNLL 753 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 ++ +FD ++G+S+ E ++++A +L + + T D D+ + +++ E++V++ N LRS Sbjct: 754 KEIELFDDYRGESVPERQRNLAFSLLYRSNERTLTDKDVGTIHNKVRESLVEEFNVTLRS 813 >gi|289449513|ref|YP_003475384.1| phenylalanine--tRNA ligase subunit beta [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289184060|gb|ADC90485.1| phenylalanine--tRNA ligase, beta subunit [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 815 Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 245/840 (29%), Positives = 398/840 (47%), Gaps = 63/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + WLK +D ++ C+ LT G +VE V E +S ++ ++ER+P+ D Sbjct: 1 MLAPIEWLKQLVDVPENIHDFCNRLTLSGSKVEGVTWFGEDVSGVVTGRIETIERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +++ G+ + +Q+V GA NV+V + A GS + I N +RG++S GM+ Sbjct: 61 KLVICQVNVGEQKNLQIVTGASNVKVNDIVPVALDGSHVNGGKQI-NTGMLRGVKSEGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + + + I LP D +G + L+L I+ +T NR DC + Sbjct: 120 CSLAELGIMSELFPEAVTDGIFILPDDLALGEPVLKALKLEGGTIEFEITSNRPDCYSIE 179 Query: 173 GIALDLVAAGLGKLKEINISCP------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 G+A + A + E ++ P L+ S L K + + +LC + + V+ Sbjct: 180 GLARE---AAITYRHEFHLPEPEVKADGLNRTSDAL--KVTVAEPALCSRYCAVRIDKVK 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P WMR+RL G+R I+ +VDITNYV L+ G P H F A I +TVRRA E Sbjct: 235 IEPSPLWMRRRLAMSGVRPINNIVDITNYVMLELGQPMHAFSADCIRGGEITVRRAAGQE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 LD+++Y L +VIA ++AGI+GG ++ + T V+ E A + P ++ + Sbjct: 295 TFTTLDDKKYVLDDSMLVIADKAGAVALAGIMGGANSCINPGTDTVIFEAACFAPDSVRQ 354 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKI 404 + LGI T+S RFER VD + LK L+ L CG +SD N+ I Sbjct: 355 TASALGIRTESSARFERIVDGWKTLRALKRACELVEKLGCGLVSSDFIDINNLPSTKPHI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKADLVEE 462 + V G+ + + + LE +G ++ + +V PS+R D+E ADL EE Sbjct: 415 KLDFNRVNTFLGLQLATSEMIATLEAVGCNLTVDSGNLTADVVAPSFRPDLEGFADLAEE 474 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + R + + I LP + S + + R + ++ S E +SF+S ++ Sbjct: 475 VARFHDYNNIPPTLLPAAET-TVGGRSTKLNIKRLIAEIMISSGFYEAYTYSFMSAKEPD 533 Query: 523 LFGGGQ----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G R++ + D S +RT+ LP LL N RA +FE+ Y Sbjct: 534 RLGLAPDSPLRKMLKIRYAPEDTSCLRTTPLPALLNIAHNNSSRAEESAGLFEIMRCYH- 592 Query: 579 DTPEGQKY-----MAAGIRKGSSGIEGSGRLWSDKS---EERCRFVDLFDAKADALSVIE 630 +GQK + A I ++ + +GRL+ + EE + + D + Sbjct: 593 -PVDGQKLPNEREVVAAIVYDNTTAKDNGRLFYELKHIVEEISQQTGIKDVE-------- 643 Query: 631 PFVSLDSLRFESGAPS---WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 F+SL + E AP+ +HP RS + + + G G HP+I + + L P C Sbjct: 644 -FLSL-AASSEVNAPAEAPCFHPYRSASLVVNRK-SFGLIGYLHPDIAETYDL--PRCTA 698 Query: 688 EVYLD---SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRL 743 + LD + + KRT+ L V RDLA +VD+ P G + NI + + L Sbjct: 699 VLLLDLATVVELHNFKRTQKP----LPKYPAVTRDLAVVVDRSTPVGEIEKNIYAHSEDL 754 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + ++ +FDV++GK+LG KKSVA + + T D I +M+RI+E + + +A LR Sbjct: 755 LAELALFDVYEGKNLGHDKKSVAFSLKFRSQTGTLNDAAINPIMNRIIEALHETLHAELR 814 >gi|294101711|ref|YP_003553569.1| phenylalanyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] gi|293616691|gb|ADE56845.1| phenylalanyl-tRNA synthetase, beta subunit [Aminobacterium colombiense DSM 12261] Length = 801 Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 232/831 (27%), Positives = 414/831 (49%), Gaps = 69/831 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + +WL + SLE++ + LT G EVE + E LS + +V+++E P Sbjct: 1 MLVSWNWLNGLVSIPASLEEVAEKLTLTGCEVEAITRPCERLSGVRVAQVIALE--PHSR 58 Query: 60 CAILRIDTGKHQEIQVVC--GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 LR+ + + E VC A N+++G L + P G+ + + ++ R G+ S GM Sbjct: 59 KNSLRVASLNYGEGAAVCVTAATNLKIGDLVPYGPSGAVLADGT-VLGERDFDGVVSQGM 117 Query: 118 MCSEKELMLSD--DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 M S E+ L D D + I+ LP DAPVG + YL L D ++D+S+TPNR D + GIA Sbjct: 118 MLSADEIGLPDIADESGILRLPSDAPVGKDVKKYLRLDDAVLDISITPNRGDLLSALGIA 177 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKF---DLDDSSLCKGFAMCCVKGVRNNVAPN 232 ++ A + N S+E + + F L+D C+ + + V+ +P Sbjct: 178 REVYALFPDVVGRKNFKN-RSNEGMEWPVNFRSISLEDEG-CRCYLLGLATDVKIEPSPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 +R L +G+R IS +VD TN L G P H FD R+ + +TVR A EKI+ LD Sbjct: 236 PIRILLSLMGMRPISNIVDATNLTMLLMGQPLHAFDLDRLPENEITVRSATPEEKIITLD 295 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L P +++I S G IAG++GG++ + T +V++E A +D I ++R+ + LG Sbjct: 296 GKERVLDPLDILITSGGSAIGIAGVMGGENTEICETTRNVVIESANFDAIRVSRTSRRLG 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFMNSE 410 + +++ +R+ RGVD + + P + +++SL+ T ++ A + R++V + Sbjct: 356 LNSEAAFRYSRGVDPELVYPAMAYVISLLKKWGAATTEWEVLEATTGSISGREVVLTREK 415 Query: 411 VKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEV-SVPSWRQDVEEKADLVEEILRIYG 468 + +L D +++S +IL RLG V E + + +PS+R D+ + DL+EE+ RI G Sbjct: 416 LNKLLLWD-DLQESSQILGRLGIREVSKEKENMRIFKIPSYRPDISIEEDLIEEVARIRG 474 Query: 469 VDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 + + S P ++ ++ + Q+ R ++ +R +EVV +SF+S L Sbjct: 475 YNDMPSRLPQKMSHPGERGAWTELQAGLR---QIALARGYIEVVTYSFLSPSYIKLLRLP 531 Query: 528 Q-----RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA-IFEVSHVYENDTP 581 + + NP+SAD+S MRT +LPGL+ A ++ + +FE+ V+ D+ Sbjct: 532 EDDERAHPFVLSNPLSADLSAMRTLMLPGLINALASSLRSGWREAVRLFELGRVFLRDSE 591 Query: 582 E--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 G+K + + +G+ GR + +E C D K+D +E F+ + Sbjct: 592 SDAGKKEV-----ERLAGLIYPGRDIRNVYKE-CLVEDFMSVKSD----VEAFLQSRGVN 641 Query: 640 F--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 + GA + H G++ I E V GY P++ + +PI FE+ LD + Sbjct: 642 YILRLGAEPFGHGGQTAEICIGNEKV-GYIARLKPSLEKELDMGSPIYAFEISLDPL--- 697 Query: 698 QKKRTKTKKVVHLSSLHP----------VKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDD 746 + +HP V RD++ +V ++ T+ + I++ L+ + Sbjct: 698 ------------IEDVHPLFCENPPYPAVHRDISLLVPENKEGKTVEDEIRSAAGSLLWN 745 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + +FDV++G + EG +S+A + + +K T D+++ + +R+ E + K Sbjct: 746 LRLFDVYKGHGVPEGSRSLAFSLAYRDMKRTLSDEEVDAVHNRVREEMASK 796 >gi|241895039|ref|ZP_04782335.1| phenylalanyl-tRNA synthetase beta subunit [Weissella paramesenteroides ATCC 33313] gi|241871757|gb|EER75508.1| phenylalanyl-tRNA synthetase beta subunit [Weissella paramesenteroides ATCC 33313] Length = 807 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 230/826 (27%), Positives = 406/826 (49%), Gaps = 42/826 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 MK +++WL+D+L + ++ + ++ +E+E + + + I KVLSV +PD D Sbjct: 1 MKVSVNWLRDYLPIALPASQLAEKISRTAVEIEGQYQPKGNMKKVVIAKVLSVVPHPDSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G+ + IQVV GAPNV G + A GS I +N I K+RG S GM+ Sbjct: 61 HMVITQLDAGEDEPIQVVTGAPNVAEGQTVILAKHGSVIGDNKKIRK-GKLRGEVSNGML 119 Query: 119 CSEKELMLSDDSASI-MELPI---------DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 + +EL D A E I D G L L D +++ +TPNR+D Sbjct: 120 AALQELGFEDKVAPKDFEEGIWVFNDVDAADLKPGEDALTVLGLDDDVLETGITPNRADL 179 Query: 169 IGVRGIALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G A + VAA L + + N ++E ++ + L +A+ VK V Sbjct: 180 FSMNGTAWE-VAAILSEEPTLPNFELTETAEQTS-DLISATAPAELATKYAVRVVKNVTV 237 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEK 286 +P W+++RL +G+R IS +VDITNY+ L G P H FD + + + + VRRA E Sbjct: 238 KDSPLWLQRRLWTMGIRPISNIVDITNYMLLMYGQPMHAFDLNALPEPEVHVRRAHDKEM 297 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I LD + + +++VIAS AG++GG+ TTD+++E A+++P +I + Sbjct: 298 IRTLDGVTREAAAEDIVIASGDEALMFAGVMGGETTEVTRETTDIVLEGAIFEPKSIRHT 357 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIV 405 ++ + +++ RFERGV+++ L H +L+ L GG + +A++ Y+ + Sbjct: 358 ARDQNLHSEASMRFERGVNVEDTFTALDHAAALVAELAGGQVTAGRVVAQDYAYEAPVVD 417 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 V + G ++ + I +RL F F V++P+ R D+ +ADL+EEI R Sbjct: 418 VSVDRVNHVLGTNITTAEISAIFDRLFFDYEENNGVFSVTIPARRWDITIEADLIEEIAR 477 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 +YG D + + LP + + L+ +Q R + L + + +++ + E++ F Sbjct: 478 LYGFDNLPAT-LPTGETTPGK-LTPKQQLIRASRHALEGLGLNQAISYVLTTPEKANRFK 535 Query: 526 GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 E +++ P+S D R+SLL GLL NV R D A++E V+ +D Sbjct: 536 LHDGEPIQLDYPMSQDRQQTRSSLLTGLLDDVAYNVARKQTDVALYEQGRVFVSDGDLTK 595 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 P +++ AG+ G+ + R W+ K++ D + K +++ + ++ + Sbjct: 596 QPAEIEHI-AGVLSGNV----TERTWAQKAQA----ADFYMLKGIVERLLKNYDFVEPIH 646 Query: 640 FESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F + HPGR+ I ++G+ G+ HP + + N FE+ LD+I I+ Sbjct: 647 FVANTVREDMHPGRTADIYV-GNTLIGFVGQIHPTTAKVYRI-NETFAFELDLDAI-IAL 703 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 K +V+ S V RDLA +V++ +PA + I+ + + D+ FDV+ G++ Sbjct: 704 PKNQGRYEVI--SRYPAVSRDLAILVNRDVPASRIEEAIQQAGGKHLHDIVTFDVYTGEN 761 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + KS+A + + T DD+ +DRI + ++ A +R Sbjct: 762 VPSDMKSIAFGLTFINAEQTMLDDETNQTVDRIAGALAEQFGAEIR 807 >gi|297617659|ref|YP_003702818.1| phenylalanyl-tRNA synthetase subunit beta [Syntrophothermus lipocalidus DSM 12680] gi|297145496|gb|ADI02253.1| phenylalanyl-tRNA synthetase, beta subunit [Syntrophothermus lipocalidus DSM 12680] Length = 684 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 200/661 (30%), Positives = 337/661 (50%), Gaps = 28/661 (4%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 D ++ + LTPNR DC G+ +A ++ A +++ +S S + + D+ D L Sbjct: 41 DAVLTLELTPNRGDCYGMINVAREVAAVFGCQIRLPQVSLKESPAKVEEHARVDIQDEDL 100 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C +A V V +P+WM++RL G+R I+ +VDITNYV L+ P H FD ++ Sbjct: 101 CPRYAARVVSNVDIKPSPSWMQRRLIQAGIRPINNIVDITNYVMLETNQPLHAFDYDLLA 160 Query: 274 -DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 + VRRAC GE+++ LD L D +VIA + ++AGI+GG+ + TT +L Sbjct: 161 GGRIIVRRACPGEQLVTLDGVLRTLDRDMLVIADADKAVALAGIMGGQETEVTEKTTTIL 220 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDI 391 +E A + +I ++ + LG+ T++ RFE+G D +G++ + LI L G + Sbjct: 221 LESANFSAPSIRKTSRRLGLRTEASIRFEKGADAEGVVWAVDRAAQLIEVLGAGEVLRGV 280 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 C + R I + V L G ++ + L RLGFS+ E V VPS+R Sbjct: 281 CDVYPGKTEQRAIRLRPARVNHLLGTELSRDQIKGYLARLGFSITAENGVLVVEVPSYRP 340 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D++ +ADL+EEI R++G + I S LP + Q+ + ++ + SR + +V+ Sbjct: 341 DLQVEADLIEEIARLHGYNNIPST-LPQGAITQGIRTPFQRFKDATIE--VLSRYLCQVM 397 Query: 512 NWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 N+SFI+ L +R +++ NP+S + S MRT+L+PG+L RN+ R D Sbjct: 398 NYSFINPGWFDLMRLDERHYWRNTVKLANPLSEEQSVMRTTLIPGMLDTVRRNLFRQNED 457 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 A+FEV V+ P ++ ++ + WS + +D F K A Sbjct: 458 LALFEVGTVF---IPRPGSLPIEELKVCAATTGKTEMHWSGMRLD----MDYFFLKGIAD 510 Query: 627 SVIEPFVSLDSLRFE--SGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + + ++ +E S PS +HPGR+ ++K AE LG GE HP +L + + Sbjct: 511 RFLF-LMGVNGCSYEGVSDHPS-FHPGRTAKVVKGQAE--LGIIGEIHPEVLSNYDIKRR 566 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR 742 +C FE L +I + R T + + V+RDLA ++ + PA T+ ++IK+ Sbjct: 567 VCVFEFDLKAIFELAESRKMTDDITRFPA---VQRDLALLIPEQTPAATVTSMIKSAGGE 623 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L+ +FDV+QG + EG KS+ ++ Q + T ++++I +L+D I+ V + L Sbjct: 624 LLRQAVLFDVYQGPQVPEGYKSLGYSLVFQSYERTLQEEEINLLIDGILRKVEHRAGGKL 683 Query: 803 R 803 R Sbjct: 684 R 684 >gi|331091479|ref|ZP_08340317.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] gi|330404035|gb|EGG83585.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA] Length = 805 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 233/836 (27%), Positives = 399/836 (47%), Gaps = 86/836 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPGLDVTAQEYTDAMTLSGTKVEGYEVLDADLEKIVIGQIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D + +++ G+ + +Q+V GA NV G L G G P + + K Sbjct: 61 DKLVVCQVNVGE-ETVQIVTGAKNVFEGAKIPVVLDGGRVAGGHDGKKTP-GGIKIKKGK 118 Query: 109 IRGIESTGMMCSEKEL--------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVS 160 +RG+ES GMMCS +EL ++D I E DA VG + L +D + + Sbjct: 119 LRGVESFGMMCSIEELGSTTEMYPEAAEDGIYIFE--DDAVVGSSAIEALGRNDVVFEYE 176 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 +T NR DC V GIA ++ A + + + E + +K ++D+ LC + Sbjct: 177 VTSNRVDCFSVVGIAREVAATFRKEFCPPVVKETGNGEEVNDYVKVTVEDADLCPRYCAR 236 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVR 279 VK V+ +P W+++RL +VG+R I+ LVDITNYV + G P H +D S I+ + + V+ Sbjct: 237 MVKNVKIAPSPKWLQRRLASVGIRPINNLVDITNYVMEEFGQPMHAYDMSTIAGNEIVVK 296 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A +GEK + LD QE ++ ++I + IAGI+GG+++ +N VL+E A +D Sbjct: 297 TAKNGEKFVTLDGQEREVDESVLMICDGEKAVGIAGIMGGENSMITENADTVLLESACFD 356 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNI 397 NI +S K +G+ TD+ +FE+G+D + LI L G + + + + Sbjct: 357 GTNIRKSSKKVGLRTDASGKFEKGLDPNNAKAAIDRACQLIEELGAGEVVGGTVDVYKKV 416 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEE 455 +P ++ F ++ + G D+ E+ L E++G EYD EV P++R D+ Sbjct: 417 K-EPVRVPFDAEKINVMLGTDISEEEMLGYFEKIGL----EYDAEAKEVIAPTFRHDLFR 471 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 ADL EE+ R YG D I + LP + + LS + + + + + +SF Sbjct: 472 LADLAEEVARFYGYDNIPT-TLPRGEATTGK-LSFKLRIEEVARNIAEFCGFSQGMTYSF 529 Query: 516 ISKE--QSVLFGGGQR---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + +L + +EI+NP+ D S MRT+ L G+L + N +R D ++ Sbjct: 530 ESPKVFDKLLIPADSKLREAVEIMNPLGEDYSIMRTTSLNGMLTSLATNYNRRNKDVRLY 589 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 E+ ++Y + PE + G+ G G D F K Sbjct: 590 ELGNIYLPKQLPVTELPEERMQFTLGMY-------GEG--------------DFFTMKG- 627 Query: 625 ALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 V+E F L + + ++ HPGR I + ++V GY GE HP + D +G Sbjct: 628 ---VVEEFFEKIGLHEKETYDPNAEKTFLHPGRQANIIYAGKVV-GYLGEVHPQVADTYG 683 Query: 680 LSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 + G Y+ + + + T +K ++ V RD++ +V + I G + +I Sbjct: 684 I-----GTRAYIAVLDMPEIVGLATFDRKYEGIAKYPAVTRDISMVVPKEILVGQIEEVI 738 Query: 738 -KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 K ++D +FD+++G + EG KSVA ++ + T + D+ M RI++ Sbjct: 739 EKKGGEYLEDYQLFDIYEGSQIKEGFKSVAYSIVFRAKDKTLEETDVTTAMTRILK 794 >gi|94984332|ref|YP_603696.1| phenylalanyl-tRNA synthetase, beta subunit [Deinococcus geothermalis DSM 11300] gi|94554613|gb|ABF44527.1| phenylalanyl-tRNA synthetase, beta subunit [Deinococcus geothermalis DSM 11300] Length = 819 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 237/848 (27%), Positives = 390/848 (45%), Gaps = 93/848 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP---FTIVKVLSVERNPD 57 MK SWLK+ + ++ + L ++GL +E ++ E +P + V + E Sbjct: 1 MKLPYSWLKELVPQLPPVQDLEPILANMGLPLEGIE--EVPAPPEGVLLAAVTAAEPIEG 58 Query: 58 LDCAILRIDTGKHQEIQVVCGAPN---VRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 L +D G H V GAPN + G + PG+ + + + VR ++G+ES Sbjct: 59 TQLTQLTLDVGPHGSKTVASGAPNAAGLPAGTMVALVTPGTRL--GDTVYGVRSLQGVES 116 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM S KEL + + S ++ P G L +D ++DV +TPNR+D + G+ Sbjct: 117 WGMAASAKELGIGETSTGLLLFPAGTAAPGTPLYELWAADSVLDVEVTPNRADVLSALGL 176 Query: 175 ALDLVAAGLGKLKEINISCPLSSES------IPLEIKFDLDDSSL----CKGFAMCCVKG 224 A DL A L + P S E P + + D S C FA V G Sbjct: 177 ARDLAAFLRLDLVQPEAGPPPSGEGEIRVTLPPRGVTLERDPSRKLRFGCDHFAARTVSG 236 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD--VLTVRRAC 282 VRN +P WM++RL G+R I +VD +NYV L+ G P+ ++D + D ++ Sbjct: 237 VRNGPSPLWMQRRLTLSGMRPIDLIVDTSNYVMLELGQPTALYDRRDVVDDQIIVSFGLR 296 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGR----------------------IQSIAGIIGGK 320 GE + L E+ + P++++I DGR I IAGI+GG Sbjct: 297 QGEVVRDLLGNEHLVGPEDLLI-RDGREVTIPTVAEAFAAAGQPKPGVGILGIAGIVGGD 355 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL-----KH 375 H +T+DV++E A +DP+ + R+ LG+ TD+ YRFERGVD P+L Sbjct: 356 HGQVRADTSDVVIESAHFDPVLLRRTSTRLGLKTDAVYRFERGVD-----PLLAPRGANR 410 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 + L+ GG A P I +++ L G++V ++ + IL RLG V Sbjct: 411 VAGLLAQFGGGQAHPGATLVGQPEVPGPIEATGDQIRALLGMEVGTDEMVDILTRLGCRV 470 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 E D V+ PSWR D+ D+ EE+ R++G + E LP +V + + Q S+ Sbjct: 471 EREDDHLSVTPPSWRVDLTIWQDVAEEVARLHGYAHLP-ETLPTLRVHESNLGAEQASQD 529 Query: 496 RY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLK 554 R ++R L+ EVV ++F + E++V + + + NP++AD + +RT+L P LLK Sbjct: 530 RAGLRRTLSGLGFQEVVTYTFTNDEEAVRARSERPGVRLRNPLTADRTALRTALYPSLLK 589 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG-------SSGIEGSGRLWSD 607 A V +FE+ V+ G+ + +G + G+ GS Sbjct: 590 AA--QVHPKGERVLLFELGRVFPA---AGETERLGLLMRGPLAPQTYAPGVAGS------ 638 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 F L +A A +L + + LR ++ P+ HPG +G + + + +G+ Sbjct: 639 ----FAVFKGLVEALAGSLGA---NLEVRQLRGDA-VPAALHPGIAGEVVWNG-VTVGWL 689 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 G HP + FGL EV L S R ++ RDLA I Q Sbjct: 690 GALHPEVAQDFGLQGDTFLLEVGLPLPGRSWSFRDPSRAPA-------AWRDLAVITPQE 742 Query: 728 IPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + G + ++ + L++ V FDV+ G + EG++SVA++++ + + T D ++ + Sbjct: 743 VSYGDIAALLRREAGELLESVEPFDVYVGAPIPEGQRSVAVRLVFRG-ERTLTDAEVDPI 801 Query: 787 MDRIVENV 794 M+R++ V Sbjct: 802 MERLMGAV 809 >gi|169334568|ref|ZP_02861761.1| hypothetical protein ANASTE_00971 [Anaerofustis stercorihominis DSM 17244] gi|169259285|gb|EDS73251.1| hypothetical protein ANASTE_00971 [Anaerofustis stercorihominis DSM 17244] Length = 794 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 217/823 (26%), Positives = 395/823 (47%), Gaps = 57/823 (6%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLDCAIL 63 ++WLK++++ D +++ D +T G VE V E + K+ + + + I+ Sbjct: 5 INWLKEYVNIDKDIKEFADMMTMSGSMVETVTYLGEGIENVVTAKINKITPHENAQKLII 64 Query: 64 RIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKE 123 +E QVV GA NV G + +A G+ +P+ + K+RG+ES GM+CS +E Sbjct: 65 CTMFDGKEEYQVVTGANNVSEGDIVPFAKVGAKLPDGTKLKKA-KLRGVESFGMLCSGQE 123 Query: 124 LMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 L +S I D P+G + L L + +ID LT NR DC + G+A + Sbjct: 124 LGMSSSIIPKNMEDGIYIFSSDVPIGIDAKEALGLDEYVIDFELTNNRQDCNSILGMAYE 183 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A K + S I ++ ++ ++ LCK + ++ + +P WM++R Sbjct: 184 AGATMGEKFIMPDFKIEDKSNDINDKLSVEVKNTDLCKRYCARLLRVKKVEPSPLWMQKR 243 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296 L G+R IS +VD++NYV L+ G P H+FD ++ + V A +GE ++ LDN E + Sbjct: 244 LMVCGIRPISNIVDVSNYVMLELGQPLHMFDYDKLEGHKIIVDTAKNGETMVTLDNIERE 303 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L ++I + R +AG++G ++ DD+T ++++E A + +I R+ + G+ +++ Sbjct: 304 LDDKMLLINDENRGVCVAGVMGAANSVVDDDTKNIVIESANFGKNSIRRTSRKFGLRSEA 363 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMNSEVKRLS 415 +E+G++ + SL++ + + I N K K+ ++V +L Sbjct: 364 SAHYEKGINPLITRYAIDRAASLLVEIGACELVEGLIDENFYEKEHVKMDIDYNDVNKLL 423 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G ++ E+ +++L+ L F + D ++ P R DV K D++E+I R+YG + Sbjct: 424 GSEISAEEQVKLLDLLNFEPKLKGDMISITAPLLRDDVNIKEDVIEDIARMYGYNN---- 479 Query: 476 PLPLTQVEDKRNLSLQQSRTR---YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-- 530 LP T +E +S + + R +K L + +E + ++F SKE+ G + + Sbjct: 480 -LPSTLMESSNYISEKNTYYRDKNALKDALVAAGALETLTYTFTSKEKLDELGFDENDIR 538 Query: 531 ---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT------P 581 L+++NP+ D MRTS++ +L+A N R + +FEV +V+ ND P Sbjct: 539 SKYLKVINPLGEDTGYMRTSMMVSILEALSFNYSRKNKERVLFEVGNVFFNDKFDELGLP 598 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 ++++ G D F+ K + F + ++F Sbjct: 599 LQKEHLVIGKYN----------------------TDFFEIKGIVEYLFNKF-RIKGVKFI 635 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + HP RS + +I+ GY G HP +L + L + E+ + +I K Sbjct: 636 KAEENMLHPSRSAYVCIDDKII-GYIGNVHPVLLKKYNLKEDVVVAELDVKTIIELYDKE 694 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGE 760 K+ +L +RD+A +VD+ + AG +++ IK + + VFDVF G+ +GE Sbjct: 695 VVFKEFPKFPAL---ERDIAVVVDEDVYAGEIIDEIKKAGGKYLVKAEVFDVFTGEQVGE 751 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKSVA + + T D++I + +IV+ + + NA LR Sbjct: 752 GKKSVAAALNFRAEDRTLTDEEIDVTFSKIVKALDENLNAKLR 794 >gi|184155764|ref|YP_001844104.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus fermentum IFO 3956] gi|183227108|dbj|BAG27624.1| phenylalanyl-tRNA synthase beta subunit [Lactobacillus fermentum IFO 3956] Length = 812 Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 227/837 (27%), Positives = 399/837 (47%), Gaps = 59/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK--VDNREALSPFTIVK------VLSV 52 MK + WL +L LE+ T T + ++ + VD + SP ++ V S+ Sbjct: 1 MKVSYQWLNHYL----PLEQNGITPTELAEKIARTSVDINDVYSPQNGLQKVVVGLVESI 56 Query: 53 ERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + +P D I ++ + +Q+VCGAPN+ G + A G+ + + I K+RG Sbjct: 57 KDHPQSDHLHIAQVKVAEDTTVQIVCGAPNLVAGKKVITALAGAKLADGTKIKK-SKLRG 115 Query: 112 IESTGMMCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 ES GM+C+ +E+ +D A + LP DA VG + YL + D IID +TPNR Sbjct: 116 EESNGMLCALQEIGFTDKVAPKAYEEGLWYLPDDAEVGAPVFSYLGMDDTIIDTDVTPNR 175 Query: 166 SDCIGVRGIALDLVA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 D + + G DL A L + +E IK + D L + + +K Sbjct: 176 GDMLSIYGNVNDLAAIYALDNGFTSHEVVENGTERTADLIKATVADQQLAPTYKLRVIKN 235 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V +P W++ RL G+R I+ +VD+TNY+ + G P H FD R+ S + VR A Sbjct: 236 VHIQDSPLWLQIRLWNAGIRPINNVVDVTNYILVKYGQPLHSFDYDRLTSHEIKVRHAAE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE+ LD +E L+ ++++ R ++AG +GG+ D T +V +E A++DP+ + Sbjct: 296 GEQFTTLDGEEQTLASQDILVCDGDRPAALAGTMGGQDTKVTDQTVNVALEAAIFDPVMV 355 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPR 402 + + L + ++S RFERG++ + + L + L GG + I A + Sbjct: 356 RKQARRLDLHSESSMRFERGINPETVEVALNEAAYWLSELAGGEVTKGIVTATEEAVQVT 415 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVE 461 I V + G+ + D + + +RL F+ + D+ V VP+ R D+ KADL E Sbjct: 416 SIELSTKRVNAVLGLSLSQADLVNLFDRLRFASQALDDDRLLVQVPARRWDIAIKADLYE 475 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 EI R+YG D I S LP T + L+ +Q R + V+ + + +++S ++ EQ+ Sbjct: 476 EITRLYGYDNIPS-TLP-TGTQTLGGLNERQRFLRASRHVMQGVGLNQAISYSLLTAEQA 533 Query: 522 VLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 F GQ L + P+S+D R +++ GLL NV R + + A++E V+ Sbjct: 534 AQFQVNPQAGQPML-LDYPMSSDHVATRMNIVAGLLIDIAYNVARQVDNVALYEQGRVFL 592 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + P ++++A + + W+ ++ VD F K ++E ++ Sbjct: 593 PVAGQERPTEEEHIAGAVTGSLTAAS-----WNQADDDNQ--VDFFTVKG----IVERYL 641 Query: 634 SLDSLRFESGAPSWY-----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG-F 687 ++ E + + HPGR + ++V GY G+ HP + + + P+ F Sbjct: 642 RNMAVEGEISYQANHDRADLHPGRCADVLLDGQVV-GYIGQVHPTVAKQYRV--PVTYVF 698 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 E+ L+ + + KR K +++ S + RD+A +VDQ + +V IK V + Sbjct: 699 ELNLEPL-LQADKRDKHYQLI--SKYPAITRDVALLVDQKVTNAQIVTAIKEVGGPYLKA 755 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FD+++G L KKS+A + Q + T +D + D+++ ++ + A +R Sbjct: 756 VHLFDLYKGNFLPANKKSLAYTLTYQADQGTLTEDQVNEAFDKVIAHLKDQVQAEIR 812 >gi|160937117|ref|ZP_02084480.1| hypothetical protein CLOBOL_02008 [Clostridium bolteae ATCC BAA-613] gi|158440018|gb|EDP17766.1| hypothetical protein CLOBOL_02008 [Clostridium bolteae ATCC BAA-613] Length = 810 Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 234/848 (27%), Positives = 395/848 (46%), Gaps = 101/848 (11%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV+ + D +T G +VE + L + ++L V+ +PD Sbjct: 1 MNTALSWIKAYVPDLDVTAQDYTDAMTLTGTKVEGYTCLDKNLEKIVVGEILEVKGHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP------------PGSCIPENNMIVN 105 D + +++ G + +Q+V GAPN+ +G P G +PE + + Sbjct: 61 DKLVVCQVNVGAEEPVQIVTGAPNITEKSIGEKVPVVLDGGRVAGGHDGGALPEEGIRIK 120 Query: 106 VRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDV 159 K+RG+ES GMMCS +EL S D + I LP D+ G + + L D + + Sbjct: 121 QGKLRGVESCGMMCSVEELGASRDMYPDAPESGIYILPGDSVPGSDAVEIMGLRDVVFEY 180 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFA 218 +T NR DC V GIA + AA GK + P + E I + +++S LC + Sbjct: 181 EITSNRVDCYSVIGIARE-AAATFGKAFHAPVVTPTGNGEDIHDYLNVRVENSELCPRYC 239 Query: 219 MCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLT 277 VK ++ +P WM++RL G+R I+ +VDITNYV + G P H FD +++ + Sbjct: 240 ARMVKNIKLAPSPQWMQRRLAGNGIRPINNIVDITNYVMEEYGQPMHAFDYDQLAGREIV 299 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVA 336 V+ A G+ LD QE L +++ +DG + IAGI+GG+++ DN ++ E A Sbjct: 300 VKCAKDGDVFQTLDGQERKLD-STILMINDGEKEVGIAGIMGGENSKITDNVQTMVFESA 358 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DIC 392 ++ NI S K +G+ TD+ ++E+G+D + LI L G D+ Sbjct: 359 CFNGTNIRLSAKKVGLRTDASGKYEKGLDPNTAEEAVNRACQLIEELGAGEVVGGIIDLY 418 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWR 450 + + ++I F ++ RL G D+P E L + + +YD EV P+WR Sbjct: 419 PEKRTS---KRIPFDAVKINRLLGTDIPEETMLSYFKTIEL----DYDPETKEVIAPTWR 471 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 QD+E ADL EE+ R YG D+I + LP + + LS + + + + Sbjct: 472 QDLERMADLAEEVARFYGYDKIPTT-LPSGEATTGK-LSYKLQIEEVAREIAEFCGFSQG 529 Query: 511 VNWSFISK---------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + +SF S E S L ++ +EI NP+ D S MRT+ L G+L + N + Sbjct: 530 MTYSFESPKVFDRMLIPEDSAL----RKTVEISNPLGEDFSVMRTTSLNGMLTSLSTNYN 585 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV----- 616 R D ++E+++VY R S + ++ +ER +F Sbjct: 586 RRNKDVRLYELANVY---------------RPKSLPL-------TELPDERMQFTLGMYG 623 Query: 617 --DLFDAKADALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGE 669 D F K V+E F + + S + HPGR I +V G+ GE Sbjct: 624 DGDFFTMKG----VVEEFFEKAGMHKKPHYDPSAEHPYLHPGRKADILYDGAVV-GFLGE 678 Query: 670 FHPNILDFFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQH 727 HP++ D + + G Y+ I P T +K ++ V RD++ +V + Sbjct: 679 VHPDVADNYKI-----GDRAYIAVIDMPSIMDFTTFDRKYTGIARFPAVTRDISMVVPKD 733 Query: 728 IPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 I G + ++I+ ++++ +FDV++G + G KSVA + + T + ++ + Sbjct: 734 ILVGQIEDVIEQRGGKVLESYKLFDVYEGAQVLAGHKSVAYSITFRAKDHTLEEKEVTSV 793 Query: 787 MDRIVENV 794 M++I+ + Sbjct: 794 MNKILNGL 801 >gi|227515644|ref|ZP_03945693.1| phenylalanine--tRNA ligase [Lactobacillus fermentum ATCC 14931] gi|227086074|gb|EEI21386.1| phenylalanine--tRNA ligase [Lactobacillus fermentum ATCC 14931] Length = 812 Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 227/837 (27%), Positives = 399/837 (47%), Gaps = 59/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK--VDNREALSPFTIVK------VLSV 52 MK + WL +L LE+ T T + ++ + VD + SP ++ V S+ Sbjct: 1 MKVSYQWLNHYL----PLEQNGITPTELAEKIARTSVDINDVYSPQNGLQKVVVGLVESI 56 Query: 53 ERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + +P D I ++ + +Q+VCGAPN+ G + A G+ + + I K+RG Sbjct: 57 KDHPQSDHLHIAQVKVAEDTTVQIVCGAPNLVAGKKVITALAGAKLADGTKIKK-SKLRG 115 Query: 112 IESTGMMCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 ES GM+C+ +E+ +D A + LP DA VG + YL + D IID +TPNR Sbjct: 116 EESNGMLCALQEIGFTDKVAPKAYEEGLWYLPDDAEVGAPVFSYLGMDDTIIDTDVTPNR 175 Query: 166 SDCIGVRGIALDLVA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 D + + G DL A L + +E IK + D L + + +K Sbjct: 176 GDMLSIYGNVNDLAAIYALDNGFTSHEVVENGTERTADLIKATVADQQLAPTYKLRVIKN 235 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V +P W++ RL G+R I+ +VD+TNY+ + G P H FD R+ S + VR A Sbjct: 236 VHIQDSPLWLQIRLWNAGIRPINNVVDVTNYILVKYGQPLHSFDYDRLTSHEIKVRHAAE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE+ LD +E L+ ++++ R ++AG +GG+ D T +V +E A++DP+ + Sbjct: 296 GEQFTTLDGEEQTLASQDILVCDGDRPAALAGTMGGQDTKVTDQTVNVALEAAIFDPVMV 355 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPR 402 + + L + ++S RFERG++ + + L + L GG + I A + Sbjct: 356 RKQARRLDLHSESSMRFERGINPETVEVALNEAAYWLSELAGGEVTKGIVTATEEAVQVT 415 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVE 461 I V + G+ + D + + +RL F+ + D+ V VP+ R D+ KADL E Sbjct: 416 PIELSTKRVNDVLGLSLSQADLVNLFDRLRFASQALDDDRLLVQVPARRWDIAIKADLYE 475 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 EI R+YG D I S LP T + L+ +Q R + V+ + + +++S ++ EQ+ Sbjct: 476 EIARLYGYDNIPS-TLP-TGTQTLGGLNERQRFLRASRHVMQGVGLNQAISYSLLTAEQA 533 Query: 522 VLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 F GQ L + P+S+D R +++ GLL NV R + + A++E V+ Sbjct: 534 AQFQVNPQAGQPML-LDYPMSSDHVATRMNIVAGLLIDIAYNVARQVDNVALYEQGRVFL 592 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + P ++++A + + W+ ++ VD F K ++E ++ Sbjct: 593 PVAGQERPTEEEHIAGAVTGSLTAAS-----WNQADDDNQ--VDFFTVKG----IVERYL 641 Query: 634 SLDSLRFESGAPSWY-----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG-F 687 ++ E + + HPGR + ++V GY G+ HP + + + P+ F Sbjct: 642 RNMAVEGEISYQANHDRADLHPGRCADVLLDGQVV-GYIGQVHPTVAKQYRV--PVTYVF 698 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 E+ L+ + + KR K +++ S + RD+A +VDQ + +V IK V + Sbjct: 699 ELNLEPL-LQADKRDKHYQLI--SKYPAITRDVALLVDQKVTNAQIVTAIKEVGGPYLKA 755 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FD+++G L KKS+A + Q + T +D + D+++ ++ + A +R Sbjct: 756 VHLFDLYKGNFLPANKKSLAYTLTYQADQGTLTEDQVNEAFDKVIAHLKDQVQAEIR 812 >gi|169824564|ref|YP_001692175.1| phenylalanyl-tRNA synthetase subunit beta [Finegoldia magna ATCC 29328] gi|167831369|dbj|BAG08285.1| phenylalanyl-tRNA synthetase beta subunit [Finegoldia magna ATCC 29328] Length = 790 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 228/826 (27%), Positives = 423/826 (51%), Gaps = 60/826 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIV-KVLSVERNPDL 58 M ++WLKD++D D +++ I D L+ G VE V D + L+ IV K+ ++++P+ Sbjct: 1 MLLPINWLKDYVDVDETIKTITDRLSETGSHVESVIDKSKYLNDKLIVAKIKKIDKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I+ ++TG + +I+VV GA N++ + +A + +P N+++ ++GI S GM Sbjct: 61 DKLSIVTLNTG-NSDIKVVTGAKNIKEDMYVCYAQVDATLP-GNIVLKEADLKGIMSPGM 118 Query: 118 MCSEKEL-----MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + S +E+ ++ +S + + + +G +++ LE+++PII+ +TPNR DC+ V Sbjct: 119 LTSFEEMGFETSVVDKNSKDGIAVLSENKIGETITEALEINEPIIEFEITPNRPDCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A + A+ K+K +I + I +EI+ D C + VK V+ Sbjct: 179 GMAREYAASFGKKIKYPSIEIKNFEDDIKDYVNSVEIQTDK-----CTRYVARVVKNVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 + +P W++ RL G+R I+ +VDITN+V L+ G P H +D +I+D V + +K Sbjct: 234 SDSPQWIKNRLIQSGIRPINNIVDITNFVMLETGQPIHAYDLDKIADKKIVVKESGSQKF 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E +LS D+V+I IAGI+GG + +T +VL+E A +D I S Sbjct: 294 TTLDDVERELS-DDVIICDGENTLGIAGIMGGFDSEITSDTKNVLIEAASFDSDTIRLSS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L + TD+ RFE+GV Q + LI + T + I ++ K + + Sbjct: 353 RRLSLRTDASTRFEKGVSQQLCDLASLRVCKLIEDITDATVINNSI--DVITKEEHLDDV 410 Query: 408 NSEVKR---LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 K+ L G ++ E+ IL+ L F ++ E + V VP RQDV DL+EE+ Sbjct: 411 ELSYKKCNDLLGSNISNEEIKNILQLLEFKIVSEDEENIMVKVPFHRQDVSIYQDLIEEV 470 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 RIYG ++I ++PL KR + S ++ K+ L S EV+++SFIS + Sbjct: 471 GRIYGFEKIGAKPLVGKL---KRGIKSEERIAIDNAKKALYSMNTFEVLSYSFISPKSYS 527 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 ++++ + ++++NP+ D S MR++++P +L +N I D ++E+ + + Sbjct: 528 KAMVQMDDDKLIKLINPLGEDFSVMRSTIIPNILDILSKNYKNKIKDICVYELGNTFH-- 585 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 G++ + +K + G+ G D +D +A L++ + Sbjct: 586 -LVGKERIET--KKLALGMYGD--------------YDFYDVRAMILALFNELGINNYEI 628 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ YH GR I + E++ FGE + D + N + E++ + Sbjct: 629 VKNKDNETYHSGRCADILVNGELI-ATFGEISYEVRDNYDFDNRVYVGEIHFTELI---- 683 Query: 700 KRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKS 757 K KK+ S +P ++RD+A +VD+ + + + I+K+ + +I +V +FD ++G+ Sbjct: 684 KHMDFKKIYTPISKYPSIERDIALVVDRQLESIEIEKEILKHSNGIIKNVYLFDEYKGEH 743 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + KKS+A +++ Q +T +D I + + I+ ++ +K NA LR Sbjct: 744 VDNDKKSLAYRIIYQSKDETLKDKIIEKIQEEILNSLEQKFNATLR 789 >gi|302380333|ref|ZP_07268803.1| phenylalanine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] gi|302311823|gb|EFK93834.1| phenylalanine--tRNA ligase, beta subunit [Finegoldia magna ACS-171-V-Col3] Length = 790 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 230/829 (27%), Positives = 424/829 (51%), Gaps = 66/829 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIV-KVLSVERNPDL 58 M ++WLKD++D D +++ I D L+ G VE V D + L+ IV K+ ++++P+ Sbjct: 1 MLLPINWLKDYVDVDETIKTITDRLSETGSHVESVIDKSKYLNDKLIVAKIKKIDKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I+ ++TG + +I+VV GA N++ + +A + +P N+++ ++GI S GM Sbjct: 61 DKLSIVTLNTG-NSDIKVVTGAKNIKEDMYVCYAQVDATLP-GNIVLKEADLKGIMSPGM 118 Query: 118 MCSEKEL-----MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + S +E+ ++ +S + + + +G +++ LE+++PII+ +TPNR DC+ V Sbjct: 119 LTSFEEMGFETSVVDKNSKDGIAVLSENKIGETITEALEINEPIIEFEITPNRPDCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A + A+ K+K +I + I +EI+ D C + VK V+ Sbjct: 179 GMAREYAASFGKKIKYPSIEIKNFEDDIKDYVNSVEIQTDK-----CTRYVARVVKNVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 + +P W++ RL G+R I+ +VDITN+V L+ G P H +D +I+D V + +K Sbjct: 234 SDSPQWIKNRLIQSGIRPINNIVDITNFVMLETGQPIHAYDLDKIADKKIVVKESGSQKF 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E +LS D+V+I IAGI+GG + +T +VL+E A +D I S Sbjct: 294 TTLDDVERELS-DDVIICDGENTLGIAGIMGGFDSEITSDTKNVLIEAASFDSDTIRLSS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L + TD+ RFE+GV Q + LI + T + I ++ K + + Sbjct: 353 RRLSLRTDASTRFEKGVSQQLCDLASLRVCKLIEDITDATVINNSI--DVITKEEHLDDV 410 Query: 408 NSEVKR---LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 K+ L G ++ E+ IL+ L F ++ E + V VP RQDV DL+EE+ Sbjct: 411 ELSYKKCNDLLGSNISNEEIKNILQLLEFKIVSEDEENIMVKVPFHRQDVSIYQDLIEEV 470 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 RIYG ++I ++PL KR + S ++ K+ L S EV+++SFIS + Sbjct: 471 GRIYGFEKIGAKPLVGKL---KRGIKSEERIAIDNAKKALYSMNTFEVLSYSFISPKSYS 527 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HVY 576 ++++ + ++++NP+ D S MR++++P +L +N I D ++E+ H+ Sbjct: 528 KAMVQMDDDKLIKLINPLGEDFSVMRSTIIPNILDILSKNYKNKIKDICVYELGNTFHLV 587 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 ++ E +K +A G ++ D D +D +A L++ + Sbjct: 588 GSERIETKK-LALG-------------MYGD--------YDFYDVRAMILALFNELGINN 625 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 ++ YH GR I + E++ FGE + D + N + E++ + Sbjct: 626 YEIVKNKDNETYHSGRCADILVNGELI-ATFGEISYEVRDNYDFDNRVYVGEIHFTELI- 683 Query: 697 SQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQ 754 K KK+ S +P ++RD+A +VD+ + + + I+K+ + +I +V +FD ++ Sbjct: 684 ---KHMDFKKIYTPISKYPSIERDIALVVDRQLESIEIEKEILKHSNGIIKNVYLFDEYK 740 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + KKS+A +++ Q +T +D I + + I+ ++ +K NA LR Sbjct: 741 GEHVDNDKKSLAYRIIYQSKDETLKDKIIEKIQEEILNSLEQKFNATLR 789 >gi|226360103|ref|YP_002777881.1| phenylalanyl-tRNA synthetase subunit beta [Rhodococcus opacus B4] gi|226238588|dbj|BAH48936.1| phenylalanyl-tRNA synthetase beta chain [Rhodococcus opacus B4] Length = 828 Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 203/600 (33%), Positives = 317/600 (52%), Gaps = 36/600 (6%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVER 54 M+ SWL + L D DV+ E++ +GLEVE+VD E + P + KVL + Sbjct: 1 MRVAQSWLTEILQRATPDWDVTAEELDAGFVRVGLEVEEVDRLEPVDGPLVVGKVLEITE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++D G + +VCGA N G L V A PG+ +P I + RK G Sbjct: 61 LTEFKKPIRFCKVDVGAAEPQGIVCGARNFAEGDLVVVALPGAVLPGGFAIAS-RKTYGQ 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + D + I+ L P A G ++ + L D +I++++TP+R C V Sbjct: 120 VSDGMICSVAELGIGKDHSGILVLEPGTALPGADANELMGLHDTVIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L A G +++ + P + P + ++ S FA V G+ N Sbjct: 180 RGLTREL-ACGF----DLDFADPAAVAPSPADGEAWPIRVEPESKATRFAARRVTGIDPN 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA++I L VRRA +GEK+ Sbjct: 235 AVSPWWLQRRLLLSGVRPISPAVDVTNYVLLELGQPLHAFDAAKIRGELVVRRAVAGEKL 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L P++VVIA D + S+AGI+GG TTD+L+E A WDP+ + ++ Sbjct: 295 TTLDETERVLDPEDVVIADDSGVLSLAGIMGGASTEVGPGTTDILLEAATWDPLAVFKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVF 406 + + +++ RFER VD + + L +L++ + GG S + +T P + + Sbjct: 355 RRHKLSSEAGKRFERVVDPEIPVAALDRAAALLVDIAGGRVESALTDIGEVT--PHRPIH 412 Query: 407 MNSEVK-RLSGIDVPIEDSLRILERLGFSV-IGEYD----KFEVSVPSWRQDVEEKADLV 460 M+ ++ R++G+D P S R L ++G SV +G D + + PSWR D+ + ADLV Sbjct: 413 MDIDLPDRVAGVDYPTGTSARRLTQIGCSVEVGVSDSGHGQLVAAPPSWRPDLVQPADLV 472 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+LR+ G+++I S L R L+ Q R R V R LA +E++ F+ Sbjct: 473 EEVLRLEGLEKIPSV---LPAAPAGRGLTPTQRRKRAVGRALAFSGYVEILPPVFLPTAV 529 Query: 521 SVLFGGGQREL-----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +G + +LNP+ +D + T+LLPGLL+ RNV R D ++F ++ V Sbjct: 530 FDTWGLDPEDPRRNTGRVLNPLESDRPELATTLLPGLLEVLARNVSRGQRDLSLFGIAQV 589 Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 13/139 (9%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK----KRTK 703 +HPGR + +V+G+ GE HP +L+ GL E+ L ++P+ + K + Sbjct: 677 WHPGRGAELLVDG-VVVGHAGELHPAVLERAGLPPRTSAVEIDLSALPLVENLPAPKVSP 735 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 V+ ++ A V + +G L++D+ +FDVF+G+ +GEG+K Sbjct: 736 FPAVLQDVAVVVDTAVPAAEVQAALRSGG--------GELLEDIRLFDVFEGEQVGEGRK 787 Query: 764 SVAIQVLIQPLKDTFRDDD 782 S+A + + T +D+ Sbjct: 788 SLAFALRFRGADRTLTEDE 806 >gi|260663520|ref|ZP_05864410.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus fermentum 28-3-CHN] gi|260552061|gb|EEX25114.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus fermentum 28-3-CHN] Length = 812 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 228/837 (27%), Positives = 399/837 (47%), Gaps = 59/837 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK--VDNREALSPFTIVK------VLSV 52 MK + WL +L LE+ T T + ++ + VD + SP ++ V S+ Sbjct: 1 MKVSYQWLNHYL----PLEQNGITPTELAEKIARTSVDINDVYSPQNGLQKVVVGLVESI 56 Query: 53 ERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + +P D I ++ + +Q+VCGAPN+ G + A G+ + + I K+RG Sbjct: 57 KDHPQSDHLHIAQVKVAEDTTVQIVCGAPNLVAGKKVITALAGAKLADGTKIKK-SKLRG 115 Query: 112 IESTGMMCSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 ES GM+C+ +E+ +D A + LP DA VG + YL + D IID +TPNR Sbjct: 116 EESNGMLCALQEIGFTDKVAPKAYEEGLWYLPDDAEVGAPVFSYLGMDDTIIDTDVTPNR 175 Query: 166 SDCIGVRGIALDLVA-AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 D + + G DL A L + +E IK + D L + + +K Sbjct: 176 GDMLSIYGNVNDLAAIYALDNGFTSHEVVENGTERTADLIKATVADQQLAPTYKLRVIKN 235 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 V +P W++ RL G+R I+ +VD+TNY+ + G P H FD R+ S + VR A Sbjct: 236 VHIQDSPLWLQIRLWNAGIRPINNVVDVTNYILVKYGQPLHSFDYDRLTSHEIKVRHAAE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE+ LD +E L+ ++++ R ++AG +GG+ D T +V +E A++DP+ + Sbjct: 296 GEQFTTLDGEEQTLASQDILVCDGDRPAALAGTMGGQDTKVTDQTVNVALEAAIFDPVMV 355 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPR 402 + + L + ++S RFERG++ + + L + L GG + I A + Sbjct: 356 RKQARRLDLHSESSMRFERGINPETVEVALNEAAYWLSELAGGEVTKGIVTATEEVVQVT 415 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVE 461 I V + G+ + D + + +RL F S + D+ V VP+ R D+ KADL E Sbjct: 416 PIELSTKRVNDVLGLSLSQADLVNLFDRLRFVSQALDDDRLLVQVPARRWDIAIKADLYE 475 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 EI R+YG D I S LP T + L+ +Q R + V+ + + +++S ++ EQ+ Sbjct: 476 EIARLYGYDNIPS-TLP-TGTQTLGGLNERQRFLRASRHVMQGVGLNQAISYSLLTAEQA 533 Query: 522 VLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 F GQ L + P+S+D R +++ GLL NV R + + A++E V+ Sbjct: 534 AQFQVNPQAGQPML-LDYPMSSDHVATRMNIVAGLLIDIAYNVARQVDNVALYEQGRVFL 592 Query: 577 ---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 + P ++++A + + W+ ++ VD F K ++E ++ Sbjct: 593 PVAGQERPTEEEHIAGAVTGSLTAAS-----WNQADDDNQ--VDFFTVKG----IVERYL 641 Query: 634 SLDSLRFESGAPSWY-----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG-F 687 ++ E + + HPGR + ++V GY G+ HP + + + P+ F Sbjct: 642 RNMAVEGEISYQANHDRADLHPGRCADVLLDGQVV-GYIGQVHPTVAKQYRV--PVTYVF 698 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDD 746 E+ L+ + + KR K +++ S + RD+A +VDQ + +V IK V + Sbjct: 699 ELNLEPL-LQADKRDKHYQLI--SKYPAITRDVALLVDQKVTNAQIVTAIKEVGGPYLKA 755 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FD+++G L KKS+A + Q + T +D + D+++ ++ + A +R Sbjct: 756 VHLFDLYKGNFLPANKKSLAYTLTYQADQGTLTEDQVNEAFDKVIAHLKDQVQAEIR 812 >gi|303233708|ref|ZP_07320362.1| phenylalanine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] gi|302495142|gb|EFL54894.1| phenylalanine--tRNA ligase, beta subunit [Finegoldia magna BVS033A4] Length = 790 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 230/829 (27%), Positives = 424/829 (51%), Gaps = 66/829 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIV-KVLSVERNPDL 58 M ++WLKD++D D +++ I D L+ G VE V D + L+ IV K+ ++++P+ Sbjct: 1 MLLPINWLKDYVDVDETIKTITDRLSETGSHVESVIDKSKYLNDKLIVAKIKKIDKHPNA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I+ ++TG + +I+VV GA N++ + +A + +P N+++ ++GI S GM Sbjct: 61 DKLSIVTLNTG-NSDIKVVTGAKNIKEDMYVCYAQVDATLP-GNIVLKEADLKGIMSPGM 118 Query: 118 MCSEKEL-----MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + S +E+ ++ +S + + + +G +++ LE+++PII+ +TPNR DC+ V Sbjct: 119 LTSFEEMGFETSVVDKNSKDGIAVLSENKIGETITEALEINEPIIEFEITPNRPDCLSVL 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 G+A + A+ K+K +I + I +EI+ D C + VK V+ Sbjct: 179 GMAREYAASFGKKIKYPSIEIKNFEDDIKDYVNSVEIQTDK-----CTRYVARVVKNVKI 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 + +P W++ RL G+R I+ +VDITN+V L+ G P H +D +I+D V + +K Sbjct: 234 SDSPQWIKNRLIQSGIRPINNIVDITNFVMLETGQPIHAYDLHKIADKKIVVKESGSQKF 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ E +LS D+V+I IAGI+GG + +T +VL+E A +D I S Sbjct: 294 TTLDDVERELS-DDVIICDGENTLGIAGIMGGFDSEITSDTKNVLIEAASFDSDTIRLSS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + L + TD+ RFE+GV Q + LI + T + I ++ K + + Sbjct: 353 RRLSLRTDASTRFEKGVSQQLCDLASLRVCKLIEDITDATVINNSI--DVITKEEHLDDV 410 Query: 408 NSEVKR---LSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 K+ L G ++ E+ IL+ L F ++ E + V VP RQDV DL+EE+ Sbjct: 411 ELSYKKCNDLLGSNISNEEIKNILQLLEFKIVSEDEENIMVKVPFHRQDVSIYQDLIEEV 470 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKE--- 519 RIYG ++I ++PL KR + S ++ K+ L S EV+++SFIS + Sbjct: 471 GRIYGFEKIGAKPLVGKL---KRGIKSEERIAIDNAKKALYSMNTFEVLSYSFISPKSYS 527 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HVY 576 ++++ + ++++NP+ D S MR++++P +L +N I D ++E+ H+ Sbjct: 528 KAMVQMDDDKLIKLINPLGEDFSVMRSTIIPNILDILSKNYKNKIKDICVYELGNTFHLV 587 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 ++ E +K +A G ++ D D +D +A L++ + Sbjct: 588 GSERIETKK-LALG-------------MYGD--------YDFYDVRAMILALFNELGINN 625 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 ++ YH GR I + E++ FGE + D + N + E++ + Sbjct: 626 YEIVKNKDNETYHSGRCADILVNGELI-ATFGEISYEVRDNYDFDNRVYVGEIHFTELI- 683 Query: 697 SQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQ 754 K KK+ S +P ++RD+A +VD+ + + + I+K+ + +I +V +FD ++ Sbjct: 684 ---KHMDFKKIYTPISKYPSIERDIALVVDRQLESIEIEKEILKHSNGIIKNVYLFDEYK 740 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ + KKS+A +++ Q +T +D I + + I+ ++ +K NA LR Sbjct: 741 GEHVDNDKKSLAYRIIYQSKDETLKDKIIEKIQEEILNSLEQKFNATLR 789 >gi|282857545|ref|ZP_06266773.1| phenylalanyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] gi|282584632|gb|EFB89972.1| phenylalanyl-tRNA synthetase, beta subunit [Pyramidobacter piscolens W5455] Length = 793 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 240/807 (29%), Positives = 387/807 (47%), Gaps = 57/807 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +++WLKD + D LE+I + LT G E+E + A+ I K++ ++P Sbjct: 1 MLLSINWLKDFIALDAPLEEIAEKLTVTGTEIESIARPCAAVRGVRIAKIVECSQHPTKS 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+D G+ + V APNV++G + W PGS + + R G S GMM Sbjct: 61 GLKVTRLDVGEKEYPLCVTAAPNVKLGDVIPWFAPGSST-VGGVELEYRDFDGFNSAGMM 119 Query: 119 CSEKELMLSD--DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S KEL + D D I+ LP DAP+G +L L D + D+S+TPNR D + V G AL Sbjct: 120 ASAKELGVPDLTDVYGILVLPQDAPLGADAGAWLGLDDTVFDMSVTPNRGDLLSVLGAAL 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL-----EIKFDLDDSSL----CKGFAMCCVKGVRN 227 ++ A + C L IP E + SL C+ + + VR Sbjct: 180 EIHA--------LFPQCGLHVPEIPKPGYDGEWTLPFEGISLESEGCRAYRLGMADSVRI 231 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEK 286 AP RL G+R I+ +VD TNY L G P H FDA+ + + VR A GE+ Sbjct: 232 APAPLQAGVRLCMAGMRPINNIVDATNYAMLALGQPLHAFDAASLPGRNIGVRAARDGEE 291 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 I+ LD +++ L P ++VI+S G ++AG++GG ++ + T VL+E A + ++++ Sbjct: 292 IVTLDGKKHRLLPSDLVISSSGTGVALAGVMGGLNSEITEKTEHVLLESANFAAPFVSKT 351 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 + LGI +++ +R+ RGVD + + + L+ G A S A+N +P ++ Sbjct: 352 SRRLGIPSEASFRYSRGVDPLLTERAMNYALHLMERWGGVRAFSRSLYAQNGEIRPVRVP 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 ++K++ D ++ + +L+RLG G DK E VP+ R D+ + DL+EE+ Sbjct: 412 LTAEKMKKILVWD-DMDGAEAVLKRLGIEKAAGGRDKAEYEVPTRRCDIAIEEDLIEEVG 470 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ--SV 522 RI G D I EP + + LS R ++ V R E V SFIS + + Sbjct: 471 RIRGYDAI--EPT-IPVLHRAGALSPAMRLQRLLRSVAIGRGYTEAVTLSFISPDSLTRL 527 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYENDTP 581 + + + NPISADMS MR SLLPGLL G+ V D +FE V+ P Sbjct: 528 RYPEAAQCKVVANPISADMSVMRPSLLPGLLNGVGKTVRGGWRDPVRVFEFGRVF---VP 584 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV----DLFDAKADALSVIEPFVSLDS 637 E +R+ +E G + E+R + D K D ++ + + + Sbjct: 585 EN-----GAVRE----VERIGGVAFSGKEKRALYASSKEDFMLVKGDVEALAQSCNA--A 633 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 L F + H G++ I ++V GY P+I L P+ FE LD P Sbjct: 634 LTFRRAQRADGHAGQTAEILFDGKVV-GYLMCLKPDIAAQLDLDTPLYAFE--LDVEPFM 690 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGK 756 + + + K ++ PV RD++ +V +PA ++ I+ V L+ V +FDV++G+ Sbjct: 691 EARLPRYAKN---NAYPPVYRDISMLVAGDVPADRVIADIRAVAGPLLSAVRLFDVYEGQ 747 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + EG +S+A + + T +D ++ Sbjct: 748 GVPEGFRSMAFSMAYRLSDRTLKDAEV 774 >gi|167765683|ref|ZP_02437736.1| hypothetical protein CLOSS21_00171 [Clostridium sp. SS2/1] gi|167712658|gb|EDS23237.1| hypothetical protein CLOSS21_00171 [Clostridium sp. SS2/1] gi|291559919|emb|CBL38719.1| phenylalanyl-tRNA synthetase beta subunit [butyrate-producing bacterium SSC/2] Length = 806 Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 239/844 (28%), Positives = 401/844 (47%), Gaps = 78/844 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +SW+K ++ D D + ++ D +T G +E V + L + K+ +E++PD Sbjct: 1 MDTPISWIKAYVPDLDCTPQEYADKMTLSGSNMESVTYLDKNLEKIVVGKIEKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVGLLG---------VWAPPGSCIPENNMIVNVRK 108 D I+ +++ G + +Q+V GAPNV G L G PE+ + + K Sbjct: 61 DKLIVCQVNVG-DETVQIVTGAPNVSEGDLVPVVLDGGRVAGGHDGGKNPEDGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS +EL S D I D G + L L D +++ +T Sbjct: 120 LRGVESFGMMCSIEELGSSRDMYPEAPEYGIYIFNKDVKPGDDAVEALGLRDAVVEFEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC + G+A + A ++ ++E + IK ++D LC + V Sbjct: 180 SNRVDCFSMIGMAREAAATFKKDFFPPVVTKTGNNEDVNDYIKVRVEDEDLCPRYTARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRA 281 K ++ +P WM++RL A+G+R I+ LVDITNYV + G P H +D I++ + VRRA Sbjct: 240 KNIKLAPSPEWMQRRLAAMGIRPINNLVDITNYVMEEFGQPMHAYDLDTIANKEIVVRRA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 +G+K LD +E + +NV++ DG + IAGI+GG+++ D+ +L E A +D Sbjct: 300 KAGDKFTTLDGEERTMD-ENVLMICDGEKEIGIAGIMGGENSMVTDDIKTLLFEAACFDG 358 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 NI S K +G+ TD+ +FE+G+D + + + LI L G + A ++ Sbjct: 359 TNIRLSSKRIGLRTDASGKFEKGLDPENAMAAMDRACQLIEELGAGEV--VGGAVDVYPN 416 Query: 401 PRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEE 455 P K + + EV +++ G +V E+ L R+ YD+ EV VPS+RQD+ Sbjct: 417 PVKQIRLPLEVDKMNALLGTNVSKEEVLEYFGRIDLG----YDEATNEVIVPSFRQDLHR 472 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWS 514 ADL EE+ R YG D I P+ L E + R V R +A + + +S Sbjct: 473 MADLAEEVARFYGYDNI---PVTLPNGESTAGKKPFKIRVEDVCRNVAEQNGFCGGMTYS 529 Query: 515 FISKE--QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F S + +L +E +EI NP+ D S MRT L G+L + N+ + + Sbjct: 530 FESPKVFDKLLLAEDAKERQAIEISNPLGEDFSIMRTVSLNGMLTSLSTNLAHRNKNVRL 589 Query: 570 FEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +E ++Y + P+ + M G+ C F L Sbjct: 590 YEFGNIYIPKSLPLTELPDERMQMTLGMYG------------------ECDFFTLKGVVE 631 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 D L + + S +G + HPGR+ + + E + Y G+ HP ++D + + Sbjct: 632 DMLDSLG--LGGRSEYAPTGEHPFLHPGRAADVTINGEKI-AYIGQIHPEVMDNYNMKG- 687 Query: 684 ICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV- 740 EVY+ I P K T +K ++ +KRDL+ ++ + I G L I K+ Sbjct: 688 ----EVYVAVIDMPTLVPKATFDRKYEGVAKFPAMKRDLSMVMKKDIFVGQLEKIFKDKG 743 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 +L++ +FDV++G + +G KSVA + + T D ++ ++++I++ +KK Sbjct: 744 GKLLESYELFDVYEGDQIEKGYKSVAYSLTFRAKDRTLEDAEVSKIVEKILDE-LKKLGV 802 Query: 801 VLRS 804 LR+ Sbjct: 803 ELRA 806 >gi|255283317|ref|ZP_05347872.1| phenylalanyl-tRNA synthetase, beta subunit [Bryantella formatexigens DSM 14469] gi|255266171|gb|EET59376.1| phenylalanyl-tRNA synthetase, beta subunit [Bryantella formatexigens DSM 14469] Length = 805 Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 242/835 (28%), Positives = 395/835 (47%), Gaps = 80/835 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ + + + ++ D +T G +VE + + L I ++LS+E++PD Sbjct: 1 MNTSLSWIKAYVPELECTAQEYTDAMTLSGTKVEGFEKLDRDLEKIVIGQILSIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D I+ ++D G + +Q+V GAPNV+ G L G V + E + + K+ Sbjct: 61 DKLIVCQVDVGT-ETVQIVTGAPNVKEGDKVPVVLDGGRVAGNHDGKMTEGGIAIKKGKL 119 Query: 110 RGIESTGMMCSEKEL-----MLSD-DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL M D I P DA VG L L D I + +T Sbjct: 120 RGVESCGMMCSIEELGSTREMYPDAPEYGIYIFPEDAKVGESAVKALGLDDVIFEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC V GIA + A + ++E +K + D+ LC + VK Sbjct: 180 NRVDCYSVLGIAREAAATFNKPFVPPVVKATGNNEDANDYVKVTVKDTDLCPRYCARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 ++ +P W+++RL G+R I+ +VDITNYV + G P H +D ++ + VRRA Sbjct: 240 NIKIAPSPLWLQRRLAVNGIRPINNVVDITNYVMEEYGQPMHAYDYDTLAGHEIVVRRAE 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GEK + LD QE + D+V++ DG + IAGI+GG+++ D+ ++ E A +D Sbjct: 300 KGEKFVTLDGQERTMD-DSVLMICDGEKAVGIAGIMGGENSMITDDVKTMMFEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 NI S K +G+ TD+ +FE+G+D + L+ L G + + P Sbjct: 359 NIRLSAKKIGLRTDASGKFEKGLDPNNAQAAIDRACQLMEELGAGE----VVGGMVDVYP 414 Query: 402 RK-----IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVE 454 K + F ++ L G D+ E+ L +R+ EYD+ EV VPSWRQDV Sbjct: 415 EKRGSVRVPFEPEKINALLGTDISAEEMLGYFKRVDL----EYDEAAKEVVVPSWRQDVL 470 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNW 513 ADL EE+ R YG D I P+ L + E R V R +A + + Sbjct: 471 RTADLAEEVARFYGYDNI---PVTLPKGEATTGKLPFYLRVEQVARDIAEYCGFSQGYCY 527 Query: 514 SFISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 SF S + +L ++ + I NP+ D S MRT L G+L + N + + Sbjct: 528 SFESPKVFDKLLLPADDKLRQAVPISNPLGEDFSIMRTLPLNGMLTSLAFNYNHRNKNVR 587 Query: 569 IFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFD 620 ++E+ ++Y + P+ + + + G+ G G ++ K EE L D Sbjct: 588 LYELGNIYLPKQLPLTELPKERMQL-------TLGMYGDGDFYTMKGVVEELFEKTGLRD 640 Query: 621 AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 V+ D +SG P + HPGR I E+ LGY GE HP D +G+ Sbjct: 641 T-----------VTYDP---KSGRP-YLHPGRQADIIYKGEL-LGYIGELHPAAADNYGI 684 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KN 739 + LD +P +K T +K ++ V RD++ +V + + AG + +I + Sbjct: 685 GER--AYIAVLD-MPAVEKFATFDRKFEGIARFPAVTRDISMVVPKSVLAGDIEAMIAQR 741 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + ++ +FD+++G + EG KS+A ++ + T + D+ M +I+ + Sbjct: 742 GGKYLESYRLFDIYEGAQIEEGYKSMAYSIVFRAKDKTLEEADVAAAMKKILHGL 796 >gi|302528043|ref|ZP_07280385.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. AA4] gi|302436938|gb|EFL08754.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. AA4] Length = 856 Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 252/889 (28%), Positives = 406/889 (45%), Gaps = 118/889 (13%) Query: 1 MKFTLSWLKDHL--DTDVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE---- 53 M+ +SWL +HL D DV+ + + D IG+EV+++ ++ P + +V +E Sbjct: 1 MRVPVSWLTEHLEVDADVTPQDLADAFVRIGIEVDELSELGPVTGPLVVGRVAEIEELTG 60 Query: 54 -RNPDLDCAILRIDTGKHQEIQ------------------------------VVCGAPNV 82 + P C R++ G+ + + +VCGA N Sbjct: 61 FKKPVRFC---RVEVGEEPDPEPDDAELSEEDEDEDDGPLENEGPHGIKTRGIVCGASNF 117 Query: 83 RVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPID-AP 141 G L V A PG +P + + RK G S GM+CS EL L DD + I+ LP A Sbjct: 118 AEGDLVVVALPGVVLP-GDFEIAARKTYGKISDGMICSAAELGLGDDHSGILVLPPGTAS 176 Query: 142 VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA---GLGKLKEINISCPLSSE 198 G + L L D +I+V+ TP+R + +RG+A +L A G ++ E Sbjct: 177 PGDDAKELLGLDDTVIEVTPTPDRGYALSIRGLARELSNALDVPFGDPAMLDNFPEAEGE 236 Query: 199 SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW-MRQRLKAVGLRSISALVDITNYVS 257 + P+ + +D C F + V G+ W +R+RL G+RSIS VD+TNYV Sbjct: 237 AWPVRV----EDPEGCPRFVLRRVTGLDATAPTPWRIRRRLMLAGIRSISLAVDVTNYVM 292 Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 L+ G+P H F I L VRRA +GEK+ LD+ E L D++VIA D + S+AG + Sbjct: 293 LELGHPLHAFATGSIQGDLVVRRAKAGEKLTTLDDVERTLDADDIVIADDSGVISLAGTM 352 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 GG +TDVL+E A W+P +I+R+ + + +++ RFER D + + Sbjct: 353 GGASTEITPESTDVLLEAAHWNPASISRTARRHKLFSEAAKRFERYTD-PALCAAAVELA 411 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVK-RLSGIDVPIEDSLRILERLGFSV- 435 + +L G A P V M + +++G+ ++R L ++G V Sbjct: 412 ARLLRQYGDGAIRPGRTDVGGVAPHAPVTMPINLPDQVAGVRYERGVTVRRLGQIGCKVQ 471 Query: 436 IGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 + D+ + PSWR D+ + ADLVEE+LR+ G D I S L R L+ Sbjct: 472 LSTSDQGVGLVTATPPSWRGDLVQPADLVEEVLRLEGYDSIPSV---LPAAPAGRGLTDV 528 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-----EILNPISADMSNMRT 546 Q R R V LA +EV + FI FG + ++ + NP+ AD M T Sbjct: 529 QRRRRAVSGALAEAGYVEVRPFPFIGDAVWDAFGLPEDDIRRTTVRVRNPLEADHDRMAT 588 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSH--------------------------VYENDT 580 +LLPGLL+ RNV R + D ++F V V E Sbjct: 589 TLLPGLLETLQRNVSRGLKDVSLFHVGQVVLPKPNQLKVPDLGVEHRPSDEDLAVLEAAV 648 Query: 581 PEGQKYMAAGI--RKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 P ++A + ++ +G G G W+D + R V A+A V + D Sbjct: 649 PAQPVHVAVVLSGQRPRAGWWGKGDQAGWADAVQA-ARLV------AEASGVQLTVQAAD 701 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 L +HPGR ++ + +G+ GE HP +++ GL E+ LD+IP+ Sbjct: 702 LLP--------WHPGRCAQLRV-GDWPVGHAGELHPKVVEALGLPPRTVAMELDLDAIPL 752 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQG 755 ++ ++S+ PV D+A + +P+ L ++++ L++++T+FDV+ G Sbjct: 753 PD-----SRPAPNISAYPPVLLDVALVAGTDVPSADLADVLREGAGELLEEITLFDVYTG 807 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + LGEGK+S+A ++ + T D+ D V ++ A LR+ Sbjct: 808 EQLGEGKRSLAYKLRFRAADRTLTVDEATKARDAAVAAAGERFGATLRA 856 >gi|326791676|ref|YP_004309497.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium lentocellum DSM 5427] gi|326542440|gb|ADZ84299.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium lentocellum DSM 5427] Length = 808 Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 213/838 (25%), Positives = 397/838 (47%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +SWLK ++D DV ++ D +T G +VE V+ + ++ K++ V+ +P+ D Sbjct: 1 MNVPMSWLKQYVDIDVDIKTFEDAMTMSGSKVEAVEESGKEITKVVAGKIIDVQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I+++D + +Q+V A NV +G + + G+ + + + K+RG S GM Sbjct: 61 KLRIMQVDVAGERPLQIVTAATNVNLGDVVPVSLDGATLA-GGLKIKAGKLRGELSEGMF 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL S++ + D +G + + L + +++ +T NR+DC + Sbjct: 120 CSVEELGFSEEDIEDAPHNGVYIFHNDIKLGSDVKPHFGLGEQVVEYEITSNRADCFSIL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA + A K +I+ + +++ LC +A +K V+ +P Sbjct: 180 GIAREAAATFKKPFKFPSITVEEVGGNAAEMASIAIENEDLCPRYAARIIKNVKVGPSPK 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALD 291 W++ RL + GLR I+ +VDITNY+ L+ G P H FD +++ + VR A +GEK + L Sbjct: 240 WLKDRLLSAGLRPINNIVDITNYMLLEFGQPMHAFDYDKLAGHEIHVRNAKAGEKFVTLF 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +E L +VIA + +IAG++GG+++ + TT +L E A ++ ++ ++ K L Sbjct: 300 EEEKTLDESMLVIADAEKAVAIAGVMGGENSKVTEETTTILFECANFNGYSVRQTSKKLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK-----IVF 406 + +DS ++ +G+D + L+ LI T + ++ I PRK I + Sbjct: 360 LRSDSSVKYTKGLDPNNITLALERAAQLI----NMTGAGEVVSGKIDIYPRKREVLTIPY 415 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + G ++P ++ + E + F+V + D V++P++R D+ ADL EE+ R+ Sbjct: 416 DVEWINNFLGTEIPEDEMVAYFESVEFAV--DKDAKTVTIPTFRSDITMMADLAEEVARL 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFIS-------- 517 YG D+IK L + E R + +Q ++ V++S + + +SF S Sbjct: 474 YGYDKIKP---TLEKAEPTRGAKTFEQITYDQIRSVMSSYGIYGALTYSFESPKVFDKLC 530 Query: 518 -KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 K S L + ++I NP+ D S MRT+ L G+L + N +R + + A++E+ +Y Sbjct: 531 IKANSPL----RDAMKITNPLGEDFSIMRTTSLNGILTSLSTNFNRRVEEAALYEIGKIY 586 Query: 577 END----------TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +G+ + A I+K + G G D F K Sbjct: 587 VKQPVTEEVITDVKRQGENLLPAEIKKLTVGAYGKN-------------TDFFSIKGMIE 633 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 +++ + + + HPGR+ + + + G+FGE HP + + L + Sbjct: 634 TLMGQLHIENIEVIRNSELDYMHPGRTATLLINGKNA-GFFGEVHPQVAKNYNLDTRVYM 692 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLID 745 E+ L+++ + K L RD+A +V + G L +I + +L++ Sbjct: 693 VELDLETMLEAINHDVTFKA---LPKYPATTRDIAMLVSKETLVGELEKVITQRSGKLLE 749 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V +FDV++G + G KSVA ++ + T D+DI+ +M +++ + A LR Sbjct: 750 TVELFDVYEGAQIEVGYKSVAFKLTFRAEDRTLTDEDIQKVMKKVLNGLEMNCGAKLR 807 >gi|86741862|ref|YP_482262.1| phenylalanyl-tRNA synthetase subunit beta [Frankia sp. CcI3] gi|86568724|gb|ABD12533.1| phenylalanyl-tRNA synthetase beta subunit [Frankia sp. CcI3] Length = 848 Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 233/828 (28%), Positives = 381/828 (46%), Gaps = 68/828 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--------KVLSV 52 M +SWL++++ + D L G EVE + R F+ V +++ Sbjct: 1 MLIVMSWLREYVAGLPPTRAVADALIRAGFEVEGL--RSVGGEFSGVVVGEIVDFEIVET 58 Query: 53 ERNPDLDCAILRIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 ++ C + ++ ++ V+CGA N VG A PG+ +P Sbjct: 59 KKKAVRWCQVRVAESAGAEDAGAESAGSRGEGVRGVICGAHNFAVGDRVAVALPGAVLP- 117 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV 159 + R+ G S GM+CS +EL L ++S I+ L AP+G +++ L+L+D ++D+ Sbjct: 118 GGFEITARRTYGHVSEGMICSARELGLGEESDGILVLAPRAPIGADVAELLDLADEVLDI 177 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK----FDLDDSSLCK 215 ++TP+R + VRGIA + AA L + P ++P + ++D++ C Sbjct: 178 AVTPDRGYGLSVRGIARE--AATAFALPFTDPGAPADPAAVPGPAREAYPVVVEDTAACD 235 Query: 216 GFAMCCVKGV--RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 + V GV R W R RL G+RSIS VD+TN V L G P H FD ++++ Sbjct: 236 RYVARVVTGVDSRATTPLGWQR-RLSLSGMRSISVPVDVTNAVLLGLGQPLHAFDRAKLA 294 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + VRRA +GE + LD + L P+++VIA D ++AG++GG TTD+++ Sbjct: 295 GAIIVRRAVAGETLRTLDGVDRTLDPEDLVIADDTGPIALAGVMGGASTEVSATTTDIVL 354 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +DPI +AR+ + + +++ RFERGVD V L+ L Sbjct: 355 EAAHFDPITVARTARRHRLSSEASRRFERGVDPALAPVAAALAVDLLAELAAARPEPGVT 414 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV------SVP 447 + P + +E +RL+G P E R L +G +V ++ + P Sbjct: 415 DLDHRPAPAPVTLPLTEPERLAGRPYPAEVVRRRLVDVGCAVADGSATEDLPGVLIATPP 474 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 SWR D+ ADLVEEI+R+ G D I P+ L + R L+ Q R V R LA Sbjct: 475 SWRPDLTRPADLVEEIMRLEGYDTI---PVTLPSLPAGRGLTAAQRMHRAVGRALAHAGF 531 Query: 508 MEVVNWSFISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 EV+ F+ ++ + + + I NPI+ D +RT+LLPGL+ A RN+ R Sbjct: 532 AEVLTLPFVPEDAADALSLAAADPRRAAVRIANPIAEDAGYLRTTLLPGLIAAAVRNIGR 591 Query: 563 AIADFAIFEVSHVYEN---------DTPEGQKYMAAGIRKGSSGIEGSGR----LWSDKS 609 D A+FE V+ P ++ AA I S + G R L + + Sbjct: 592 GQRDLALFESGLVFRERERIPTDVVTPPVDRRPSAAEIAALDSTLPGQPRHVAALLTGRR 651 Query: 610 E----ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 E + DA V+ V + +L +G +HPGR + +V G Sbjct: 652 EPGGWSTPARDADWADAVDAAHVVAEAVGV-TLTVRAGNVMPWHPGRLAELSIDGRVV-G 709 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + GE HP +L GL E+ LD++ I +S+ P RD+A +V Sbjct: 710 HAGELHPRVLSDVGLPPRAGAMELDLDAL-IEVASAAPPMIAPTISTYPPADRDVALVVP 768 Query: 726 QHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 +P + ++ L++ +T+FDVF+G +G G++S+A + ++ Sbjct: 769 IEVPVADVTAALRAGAGDLLESLTLFDVFEGAQVGVGQRSLAFGLRLR 816 >gi|87303685|ref|ZP_01086460.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. WH 5701] gi|87281790|gb|EAQ73755.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. WH 5701] Length = 820 Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust. Identities = 220/844 (26%), Positives = 405/844 (47%), Gaps = 64/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD 59 M+ +L WL++ + + ++++ + L+ G EVE +D+ + + +V V + +PD D Sbjct: 1 MRVSLQWLRELVSCEGPVQELAERLSIAGFEVEAIDDLASQAEGVVVGFVEDRQPHPDAD 60 Query: 60 ----CAILRIDTGKHQEI-QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 C + G + + QVVCGA NVR G+ A G+ + ++ + ++RG+ S Sbjct: 61 RLSVCQLRVAPAGSAETLLQVVCGAANVRAGIHVPVALVGAHLSAVDLTIQASELRGVAS 120 Query: 115 TGMMCSEKELMLSDDSASIMEL----PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 TGM+CS KEL L+D S I L + +G ++ L L D ++++++T NR D + Sbjct: 121 TGMICSLKELGLADSSDGIAVLDELLEVVPALGTPVAAALGLDDQVLELAITANRPDGLS 180 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--FAMCCVKGVRNN 228 + GIA ++ A G+L + + +E +P+ +++ G F++ + GVR Sbjct: 181 MLGIAREVAALTGGQLSLPPAAPVIPNEPLPVGPA---SAAAIEAGGLFSLTALTGVRVE 237 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS---------DVLTVR 279 +P W+++RL+ GLR I+ +VDITN V L+ G P H FD R++ L +R Sbjct: 238 PSPAWLQRRLERAGLRPINNVVDITNLVMLETGQPLHAFDQGRLAVLGGRPADPAALGLR 297 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A +GE ALD ++LSP+ +V+ G+ ++AG+IGG + +T + +E A++ Sbjct: 298 PAQTGEAFSALDGTSHELSPEALVVTYAGQPIALAGVIGGADSAVQADTESLWLEAAMFS 357 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 + RS +++G+ TD+ RFE+G+ + + V L+ L G + + Sbjct: 358 AEAVRRSARSVGLRTDASARFEKGLPREVTLTAADRAVQLLQELTGARVQGRWLHQRPQQ 417 Query: 400 KPRKIVFMNSEVKRLSG---IDVPIEDSL-----RILERLGFSVIGEYDKFEVSVPSWRQ 451 + + L G +D ED + L LG S+ + + + V+VP R Sbjct: 418 PAEPLRLRRDALHNLLGPLLVDGQAEDLADGRIEQTLSALGCSLQADGEGWLVTVPPSRS 477 Query: 452 -DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 D+ + DL+EE+ R+ G D S P P+ + L Q R++++ L + E Sbjct: 478 MDLTREVDLIEEVARLVGYDHFASHLPDPI----EPGGLEAGQQAERWLRQALCHAGLQE 533 Query: 510 VVNWSFISK----EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 +S + EQ+ G + NP+ D ++R SLL LL A RN+ ++ Sbjct: 534 TCAFSLVPAQGLIEQAPRLG-------LTNPLLTDYGHLRDSLLDELLLAARRNLQASMP 586 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 F FE+ V+++ EG+ + G E LWS S + R +D F+A+ Sbjct: 587 GFWAFEIGRVFQS---EGENLLERTELAGVICGERRSELWS--SAGKARSLDYFEAR--- 638 Query: 626 LSVIEPFVSLDSLRFESGAPSWY---HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 V++ ++ + E A S + HPGR+ + + G+FG+ HP + L Sbjct: 639 -GVLQQALAALKVPCEDRASSDHHLLHPGRAAELLVEGRVA-GWFGQLHPQHAEALNLPE 696 Query: 683 PICGFEVYLDSIPISQKKRTKTKKV-VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 F++ L + + +R + + +++ +RDLA +V + A L++ I+ Sbjct: 697 ATHLFQLALTPLLSAATRRNRWQPAFTPFATVPASERDLALVVPDAVTAAQLLSAIRKAG 756 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 + L++ + D +QG + G S A ++ + + T + ++ +I+ + K+ A Sbjct: 757 KPLLETAELIDRYQGSQVEAGNASQAFRLRYRDARRTLTEAEVEQAHTKILGALQKQFGA 816 Query: 801 VLRS 804 RS Sbjct: 817 ARRS 820 >gi|227873360|ref|ZP_03991620.1| phenylalanine--tRNA ligase [Oribacterium sinus F0268] gi|227840796|gb|EEJ51166.1| phenylalanine--tRNA ligase [Oribacterium sinus F0268] Length = 811 Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 240/822 (29%), Positives = 388/822 (47%), Gaps = 71/822 (8%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M +++WL+ ++ VS ++ D +T G +VE +++ E L K+LS+E++PD Sbjct: 1 MNTSMNWLRAYVPGLSVSGQEFRDAMTLAGNKVETMEDLGENLEKIVTGKILSLEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D +I ++D G Q IQ+V GA N++ G L G V P+ + + K+ Sbjct: 61 DKLSICQVDIGNEQ-IQIVTGAQNMKQGDVVPVVLDGGKVKVAHDGSKPKEGVEIRAGKL 119 Query: 110 RGIESTGMMCS------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ S GMMCS EK L + + P PVG ++ L L D + + +T Sbjct: 120 RGVPSNGMMCSIEELGGEKNLFPEAPESGLYIFPEGTPVGVDAAELLGLRDILHEYEITS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC V G+A + A L+ I S E + + +L LCK + +K Sbjct: 180 NRVDCFSVLGLAREAAATFKQTLQYPKIEKLGSQEDVSSYLSVELKSPELCKRYTARLIK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRAC 282 V +P WM+ RL+ G+R I+ VDITNYV L+ G P H FD I + V RA Sbjct: 240 NVHFAPSPLWMQIRLRTAGIRPINNFVDITNYVMLELGQPMHAFDYDTIKGHKIIVERAK 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE LD E++LS D+++ DG R ++ GI+GG+++ D +V++E A +D Sbjct: 300 EGESFTTLDGVEHELS-DSILCIKDGERSIALGGIMGGENSMITDQVKNVVLEAACFDGT 358 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYK 400 NI SG+ LG+ TD+ FE+G+D + +LI L G + + Sbjct: 359 NIRLSGRKLGLRTDASAYFEKGLDPNLCEMAMDRACTLIEELGAGEVVGGMLDCYPEKRE 418 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI----GEYDKFEVSVPSWRQDVEEK 456 K+ ++ L G+ + E+ +IL L S ++ + +PS+RQD+E Sbjct: 419 DTKLTVSVFDINNLLGLSLSGEEMKKILTALEISTEVKNGANGEELSLVIPSFRQDLERM 478 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 AD+ EE+ R YG D+I S T V K ++L L Q + R++ L E +SF Sbjct: 479 ADIAEEVARFYGYDKIPSTLPKATTVGGKAKDLQLNQ-KLRHLAEALGYS---ESYFYSF 534 Query: 516 ISKE--QSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 SK+ + +LF E + I NP+ D S MRTS +PG+L+A N + +F Sbjct: 535 ESKKVYEKLLFPKDAMEWQQITIANPLGEDFSVMRTSSVPGMLQALSLNEHHKNKNAKLF 594 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 E++ +Y + PE + + + G G G D F K + Sbjct: 595 EMAKIYIPKALPLTELPEERMTL-------TLGFAGEG--------------DFFSLKGE 633 Query: 625 ALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 ++ + ++ ++YHPGR I ++ LG GE HP +L F + Sbjct: 634 VEELLRQSGLQGNFHYDKDCEKAFYHPGRKANISYEGKL-LGSLGEIHPEVLQNFDMKEK 692 Query: 684 ICGFEVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVD 741 + L+++ P+S R K K V + V RD + +V ++ AG L I K Sbjct: 693 AYVAILDLEALYPLSGDFR-KYKPVAKFPA---VTRDFSLLVPVNVMAGDLEEAIRKGAG 748 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 L++ + +FD++ G + EG KS++ +V I+ T + +I Sbjct: 749 ELLEKIELFDIYVGAQVQEGYKSMSYKVSIRAKDHTLTEQEI 790 >gi|289523097|ref|ZP_06439951.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503640|gb|EFD24804.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 797 Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust. Identities = 234/815 (28%), Positives = 409/815 (50%), Gaps = 55/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M + +WL + +D +++ + LT G EVE + + L I KVL E P + Sbjct: 1 MLVSWNWLTELVDLQINVNDFAEKLTMAGAEVENLSYTAQKLDGIIIAKVL--EMAPHRE 58 Query: 60 CAILRIDTGKHQEIQVVC--GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 L++ T + + +C GA NV+ G + +APPG+ I + + ++ + + G++S GM Sbjct: 59 RKNLQVVTLVWGDERAICVTGAQNVKEGDIVPYAPPGATIADGS-VLGIEEFDGVKSFGM 117 Query: 118 MCSEKE--LMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 M S E L L I+ LP DAP+GG + +L + D ++DVS+TPNR D + + G+A Sbjct: 118 MLSADEIGLPLLSQEEGILILPQDAPLGGDAASWLGIKDVVLDVSVTPNRGDLLSMVGMA 177 Query: 176 LDLVAAGLG-KLKEINISCPLSSESIPLEIKFD---LDDSSLCKGFAMCCVKGVRNNVAP 231 + A G +LKE+N P ++ES + F+ L+DS C + + + + +P Sbjct: 178 REAHALFTGSRLKELNF--PSTTESSDWPVSFEGVTLEDSG-CPLYCLGFAEELEIAPSP 234 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 R RL G+R IS +VD+TNYV L G P H FD ++ + +TVR + +GEKI L Sbjct: 235 IKCRVRLALCGVRPISNVVDVTNYVMLLLGQPLHAFDLDKLPAPEITVRSSRNGEKITTL 294 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E+ LS D+++I S G +AG++GG ++ D+NT +L+E A + P I+ + + L Sbjct: 295 DGREHILSSDDLLITSGGLPIGLAGVMGGANSEIDENTRRILIESAHFLPARISTTARRL 354 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKPRKIVFMNS 409 GI +++ YR+ RGVD L + L+ CG + + + + + Sbjct: 355 GINSEAAYRYARGVDKAKAPLALSCALDLMKKWKCGKVYTSVIREGDAAPVEKFVPLTAK 414 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++K +G + ++ IL LGF V +K VP +R DVE + DL+EE+ RI G Sbjct: 415 KLKTYTGTG-NLSEASSILMPLGFEVESCSEEKAIYKVPGYRMDVEIEEDLIEEVARIKG 473 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-----QSVL 523 D++ + LP ++ D + L+ R ++ L +R +E++N+SFIS + Sbjct: 474 YDELPAR-LP-GRIHDSATIGLESRTERKIRETLMARGYIEILNYSFISPKFIADLSIPA 531 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA-DFAIFEVSHVY--ENDT 580 + NP+S D S +RT LLPG++ N+ + IFE+ +V+ E Sbjct: 532 LDSRANPFALANPLSMDQSLLRTFLLPGMVNVICDNLRKGWRFPVRIFEIGNVFLREGAN 591 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFDAKADALSVIEPFVSLDSL 638 +K++A I G D+S +E R D F K D L++ + F L Sbjct: 592 LIEEKHIAGAIFLGK----------DDRSPYKEAVR-DDFFTMKGDILALADAF----RL 636 Query: 639 RFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 +F+ G+ + H G++ + + + G+ + P+I L + FEV P Sbjct: 637 KFDVLPGSEPFGHAGQTADVISDGRKI-GFMAKIKPSIERRLELPASLYVFEVTFK--PF 693 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQG 755 K + +V S++ RD++ IV + + + +I ++ L+ + +FD+++G Sbjct: 694 LMAKPPRFGEVHRFPSVY---RDISLIVPEDVTVKEIGELIGDLSSDLVTSIRLFDIYKG 750 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 K++ EG +S++ + + T D+++ L R+ Sbjct: 751 KNIPEGHRSLSFTLEYRHPDKTLSDEEVDELHTRL 785 >gi|325660916|ref|ZP_08149544.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|331085368|ref|ZP_08334454.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] gi|325472990|gb|EGC76200.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA] gi|330408151|gb|EGG87641.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA] Length = 805 Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 235/832 (28%), Positives = 394/832 (47%), Gaps = 78/832 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGYEVLDADLEKIVIGQIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGL-LGVWAPPGSCIPENN-------MIVNVRKI 109 D + +++ G + +Q+V GA NV G + V G ++ + + K+ Sbjct: 61 DKLVVCQVNVGS-ETVQIVTGAKNVFEGAKIPVVLDGGRVAGSHDGKQVAGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG++S GMMCS +EL + D I DA VG + L +D + + +T Sbjct: 120 RGVDSFGMMCSIEELGSTKDMYPEAAENGIYIFEEDAVVGSSAIEALGRNDVVFEYEVTS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC V GIA + A + ++ +SE + IK ++D+ LC + VK Sbjct: 180 NRVDCFSVVGIAREAAATFGKEFHPPVVTETGNSEDVNDYIKVTVEDADLCPRYCARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 V+ +P WM++RL +VG+R I+ LVDITNYV + G P H +D +I+ + V+ A Sbjct: 240 NVKVGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLEKIAGKEIVVKTAK 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 SGEK + LD QE +L ++I + IAGI+GG++ D+ +L E A +D N Sbjct: 300 SGEKFVTLDGQERELDESVLMICDGEKSVGIAGIMGGENTMITDDVQTMLFEAACFDGTN 359 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKP 401 I +S K +G+ TD+ +FE+G+D + LI L G + +P Sbjct: 360 IRKSSKKVGLRTDASGKFEKGLDPNNAKAAIDRACQLIEELGAGEVVGGTVDVYGKVKEP 419 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADL 459 ++ F ++ + G D+ E+ L ++G EYD+ EV P++R D+ ADL Sbjct: 420 VRVPFDAEKINVMLGTDISEEEMLGYFAKIGL----EYDEDTKEVIAPTFRHDLFRLADL 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFISK 518 EE+ R YG D I P L + E + R V R +A + + +SF S Sbjct: 476 AEEVARFYGYDNI---PTTLPKGEATTGKLSFKLRIEEVARNIAEFCGFSQGMTYSFESP 532 Query: 519 E--QSVLFGGGQ--REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + +L RE+ EI+NP+ D S MRT+ L G+L + N +R D ++E+ Sbjct: 533 KVFDKLLIPADSKLREVVEIMNPLGEDYSIMRTTSLNGMLTSLATNYNRRNKDVRLYELG 592 Query: 574 HVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS---VI 629 ++Y P ++ EER +F + D S V+ Sbjct: 593 NIYLPKQVP-----------------------VTELPEERMQFTLGMYGEGDFFSMKGVV 629 Query: 630 EPFVSL------DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 E F ++ +G P + HPGR I ++V GY GE HP++ D +G+ Sbjct: 630 EEFFEKIGMHKKETYDPHAGKP-FLHPGRQANIIYDGKVV-GYLGEVHPDVADTYGI--- 684 Query: 684 ICGFEVYLDSIPISQKKRTKT--KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNV 740 G Y+ I + + T +K ++ V RD++ ++ + I G + ++I K Sbjct: 685 --GTRAYVAVIDMPEVVELATFDRKYEGIAKYPAVTRDISMVMPKEILVGQVEDVIEKKG 742 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 ++ +FD+++G + G KSVA ++ + T + D+ M RI++ Sbjct: 743 GAYLESYKLFDLYEGAQIKAGFKSVAYSIVFRAKDKTLEEADVTAAMTRILK 794 >gi|111017972|ref|YP_700944.1| phenylalanyl-tRNA synthetase subunit beta [Rhodococcus jostii RHA1] gi|110817502|gb|ABG92786.1| phenylalanine--tRNA ligase beta subunit [Rhodococcus jostii RHA1] Length = 828 Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust. Identities = 201/599 (33%), Positives = 315/599 (52%), Gaps = 34/599 (5%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVER 54 M+ SWL + L D DV+ E++ +GLEVE+VD E + P + KVL + Sbjct: 1 MRVAQSWLTEILQRATPDWDVTAEELDAGFVRVGLEVEEVDRLEPVDGPLVVGKVLEITE 60 Query: 55 NPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGI 112 + I ++D G + +VCGA N G L V A PG+ +P I + RK G Sbjct: 61 LTEFKKPIRFCKVDVGAAEPQGIVCGARNFAEGDLVVVALPGAVLPGGFAIAS-RKTYGQ 119 Query: 113 ESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CS EL + D + I+ L P A G ++ + L+D +I++++TP+R C V Sbjct: 120 VSDGMICSVAELGIGKDHSGILVLEPGTALPGADANELMGLNDTVIELNITPDRGYCFSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE---IKFDLDDSSLCKGFAMCCVKGV-RN 227 RG+ +L A G +++ + P S P E ++ S FA V G+ Sbjct: 180 RGLTREL-ACGF----DLDFADPASVAPYPAEGEAWPIRVEPESKATRFAARRVTGIDPK 234 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 V+P W+++RL G+R IS VD+TNYV L+ G P H FDA++IS L VRRA +GEK+ Sbjct: 235 AVSPWWLQRRLLLSGVRPISPAVDVTNYVLLELGQPLHAFDAAKISGELVVRRAVAGEKV 294 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E L P++VVIA D + S+AGI+GG TTD+L+E A WDP+ + ++ Sbjct: 295 TTLDEIERVLDPEDVVIADDSGVVSLAGIMGGASTEVGSETTDILLEAATWDPLAVFKTA 354 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + + +++ RFER VD + + L +L++ + GG + + P + + M Sbjct: 355 RRHKLTSEASKRFERVVDPEIPVAALDRAAALLVDIAGGRV-EPALTDIGEVTPHEPIHM 413 Query: 408 NSEVK-RLSGIDVPIEDSLRILERLGFSV-IGEYD----KFEVSVPSWRQDVEEKADLVE 461 + ++ R++G+D P + R L ++G +V +G D + PSWR D+ + ADLVE Sbjct: 414 DIDLPDRVAGVDYPNGTAARRLTQIGCNVEVGVSDSGHGQLVAGPPSWRPDLVQPADLVE 473 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E+LR+ G+++I S L R L+ Q R R V R LA +E++ F+ Sbjct: 474 EVLRLEGLEKIPSV---LPAAPAGRGLTPAQRRKRAVGRALAFAGYVEILPPVFLPPGIF 530 Query: 522 VLFGGGQRELE-----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +G + +LNP+ +D + T+LLPGLL+ RNV R D ++F ++ V Sbjct: 531 DTWGLDPEDPRRNTSTVLNPLESDRPELATTLLPGLLEVLARNVSRGQRDLSLFGIAQV 589 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 13/139 (9%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK----KRTK 703 +HPGR + + +V+G+ GE HP +L+ GL E+ LD++P+ + K + Sbjct: 677 WHPGRGAELLVNG-VVVGHAGELHPAVLERAGLPPRTSAVEIDLDALPLVENLPAPKVSP 735 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 V+ ++ A V + +G L++D+ +FDVF+G+ +GEG+K Sbjct: 736 FPAVLQDVAVVVDTAVPAAEVQAALRSGG--------GELLEDIRLFDVFEGEQVGEGRK 787 Query: 764 SVAIQVLIQPLKDTFRDDD 782 S+A + + + T +D+ Sbjct: 788 SLAFALRFRGVDRTLTEDE 806 >gi|121551164|gb|ABM55771.1| PheT [Pasteuria ramosa] Length = 806 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 228/840 (27%), Positives = 410/840 (48%), Gaps = 72/840 (8%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDL 58 M+ + WL +++D D + + + LT G+EVE++ +E + + V V+ +P Sbjct: 1 MRVSYKWLAEYVDLKDTTPIALAEKLTLAGIEVEEIIAYQEIIQHVVVGYVQDVQPHPQA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C ++ ID + + +VCGA NV+ G A G+ +P + + +RGI S Sbjct: 61 DRLKICTVI-IDKND-EPLNIVCGAKNVKKGQHVPVAKIGATLP-GGIKIKKTSLRGITS 117 Query: 115 TGMMCSEKELMLSDDSAS---IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 GM+CS KEL L D+++ IM L + +G + +L L D ++ ++ T NR+D +G+ Sbjct: 118 YGMICSAKELGLPMDTSAEGGIMVLDEASSLGEDILQHLALLDTVLVLAPTANRTDILGI 177 Query: 172 RGIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 G+A++ V A L + L + L S+ LE+ + D LC +A + V+ Sbjct: 178 HGLAIE-VGAILSREVYLPHLKPFPMLGSQH--LEVTTEKKD--LCAFYACQRLIDVKIQ 232 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P W++ RL G+R S LVDIT V L+ GYP H+FD +I+ L + + K + Sbjct: 233 PTPMWIKNRLIMSGIRPHSLLVDITQLVFLETGYPMHIFDMHKINGNLQLHTTKNQTKFI 292 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L +Q+ L ++V++ D +I ++AGIIGGK A D TTD+L+E A + + ++ + Sbjct: 293 DLHDQQKTLPLGSLVLSDDKQILALAGIIGGKAASIDHQTTDILLESACFPSFLLRQTAR 352 Query: 349 NLGIITDSRYRFERGVDLQGMIPV-----LKHIVSLILSLCGGTAS-------DICIARN 396 +L T S RF +G G PV L + L+ L + D I+RN Sbjct: 353 HLQYKTSSAMRFAKG----GCTPVLAMKALTRAIQLLTELADANTTGPVVLLADSQISRN 408 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 R I + + G ++ IL+RL + ++ K+E+ V +R D++ + Sbjct: 409 ----ERVITLQQQHLTKTLGYELATSTVENILQRLRLTTNVQHGKYEIVVDDFRPDLQTE 464 Query: 457 ADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 D++EEI+RI+G ++ K+ P T ++ + L+L Q + R V+ +L E +S Sbjct: 465 IDIIEEIVRIHGWHRVPKTFP---TFIQQYKGLTLAQKQRRQVRSLLVHWGFQEACTYSL 521 Query: 516 ISKEQSVLFGGGQRE------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +SK++ + + + + + NP+S++ + +RT+LLP LL N Sbjct: 522 LSKKEILKWQDPKLQDNDKIMWSLTNPMSSEYNVLRTTLLPSLLSVAAHNWRHGHHVQRW 581 Query: 570 FEVSHVYE---NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 FE++ Y N+T I K + G G + S + F A L Sbjct: 582 FELARTYHKGPNNT---------AIEKWELVLLGVGNKMTALSHQHLPSPGNFYALKGIL 632 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS-AEIVLGYFGEFHPNILDFFGLSNPIC 685 + + ++ + +E +HP R+ IK + + ++GY GE NI + L+ + Sbjct: 633 TSLADYLGM-KFTYEQIRTHNFHPFRTSAIKQADGQEIMGYLGELRQNICQDYDLATNVS 691 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRL 743 + D+I +T + ++ P ++RD+A + D+ I ++ +I KN L Sbjct: 692 AAVLQWDNI------QTHPALNIKPWAIFPCIRRDIALVADEDISHAQIIEVIKKNAGPL 745 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + DVT+FDVF+ +L KS+A ++ Q + T +D +++ +++ ++ + K+ LR Sbjct: 746 LVDVTLFDVFKAGNLASNHKSLAYALVFQSAERTLQDTELKEIINNLLNCLAKELGITLR 805 >gi|289704511|ref|ZP_06500946.1| phenylalanyl-tRNA synthetase, beta subunit [Micrococcus luteus SK58] gi|289558769|gb|EFD52025.1| phenylalanyl-tRNA synthetase, beta subunit [Micrococcus luteus SK58] Length = 859 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 239/869 (27%), Positives = 396/869 (45%), Gaps = 76/869 (8%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNP 56 M+ L WL++ + E + L +GLE E V E P + +VLS E P Sbjct: 1 MRIPLDWLREFVPVPAEHRAEDVMADLVRVGLEEEDVHRPAAELQGPIVVGQVLSKEPEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C++ + G Q + +VCGA N VG V A PG+ +P Sbjct: 61 QKNGKTINWCSVRVVPEGAAQPLTGEGIEPSGVQGIVCGAHNFEVGDKVVVALPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSAS----IMELPIDAPVGGRLSDYLELSDP 155 + ++ RK G S GM+ S EL + DD + +L +D G D L+L Sbjct: 120 GDFRISPRKTYGHVSAGMIASSTELGMGDDGTDGIIVLGDLGLDPEPGTDARDVLDLHGE 179 Query: 156 IIDVSLTPNRSDCIGVRGIALDLV-AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL- 213 ++++TP+R +RG+A + A G+ P +++ ++ D DD+ + Sbjct: 180 AAEINVTPDRGYAFSMRGVAREYAHATGVPFTDPAAAIHPPAADDAGPAVRID-DDAPIH 238 Query: 214 ----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 F V GV P W+ RL+ G+R+IS VDI+NYV + G P H +D Sbjct: 239 GEPGATRFVARTVSGVDATRPTPPWLAARLRLAGIRTISLPVDISNYVMWELGQPLHFYD 298 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A +S + VRRA +GE + LD +E +L ++++I D +AG++GG D T Sbjct: 299 AETLSGEIVVRRARAGETLTTLDGKERELDAEDLLITDDSGPIGLAGVMGGAATEVTDAT 358 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T ++VE A +DP++IAR+ + + +++ R ERGVD + + V L++ L GGTA Sbjct: 359 TTIVVESANFDPVSIARTRRRHRLPSEASKRNERGVDWEIADEAAERAVQLLVELAGGTA 418 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGE-----YDKF 442 +P + L G+ ++ + L LG V + E + Sbjct: 419 EPGVTDVGTRPQPAVVEMAADFPSALVGVAYTTDEVVETLRALGAEVTVAEAADDAAPRL 478 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V+ PSWR D+ DL EE+ R+ G D+I S +P+ R + +Q++ R V L Sbjct: 479 TVTAPSWRTDLRIPEDLAEEVARLRGYDEIPSV-VPVAP--PGRGFTRRQAQRRRVSAAL 535 Query: 503 ASRAMMEVVNWSFISKEQSVLFGG-----GQ--RELEILNPISADMSNMRTSLLPGLLKA 555 A+ + EV+ + F+S+EQ+ FG GQ + + NPI++ ++R SLLPGL++ Sbjct: 536 AAAGLTEVLAYPFVSEEQNRRFGADSDAQGQALAMVALANPIASQYRHLRLSLLPGLVET 595 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKY---------------MAAGIRKGSSGIEG 600 RN+ R D A++E+ V+ G + AGI + G Sbjct: 596 ARRNLSRGFRDLALYEMGLVFLPGAQLGSATIPPRAVHPSAEVLADLEAGIPAQPWHVAG 655 Query: 601 --SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG---I 655 +G + + R VD DA A AL V + V L G +HPGR + Sbjct: 656 LYAGHDSAPGPDHDPRPVDWQDAVAGALDVAD--VLGVGLAARQGRHHAFHPGRVAELVV 713 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 + + V+G GE HP L+ L +E+ LD++ + + LS+ Sbjct: 714 VTEHGDRVVGVAGELHPQWLEAEDLPARTSVWELDLDALCAAAPEIVVAAP---LSTFPV 770 Query: 716 VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +D+A +VD+ + AG + + + L++ V +FDV++G + EG+KS+A + + Sbjct: 771 STQDVALVVDEAVVAGDVRATLAEGAGELLEAVELFDVYRGAGVPEGRKSLAFSLRFRAP 830 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 T +++ ++ AV R Sbjct: 831 DRTLTAEEVSEARAAATALAAQRHGAVQR 859 >gi|313904203|ref|ZP_07837582.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium cellulosolvens 6] gi|313471005|gb|EFR66328.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium cellulosolvens 6] Length = 808 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 228/834 (27%), Positives = 389/834 (46%), Gaps = 81/834 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + SWLK ++ D DVS ++ D +T G + E D + L + K+ S+E++PD Sbjct: 1 MNTSYSWLKMYVPDLDVSAQEYFDGMTLSGTKCETYDILDKNLKDIVVGKIESMEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG---------SCIPENNMIVNVRK 108 D I +++ G + Q+V GAPNVRVG+L PG S +PE+ + + Sbjct: 61 DHLMICQVNIGS-ETTQIVTGAPNVRVGMLTPVVLPGGKVAGGHDGSAMPEDGIEIKDGN 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS--------------DYLELSD 154 +RG+ S GMMCS +EL S E +AP G + L L D Sbjct: 120 LRGVPSHGMMCSIEEL------GSTREFYPEAPENGLYEFSESDGVKPGDDAIEALGLHD 173 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 + +T NR DC V GIA + A K I +SE + IK D+ D LC Sbjct: 174 INFEYEITSNRVDCYSVIGIAREAAATFRKKFIPPVIKETGNSEDVNDYIKVDVQDPELC 233 Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS- 273 + VK ++ +P WM++ L + G+R I+ +VDITNYV + G P H FD I+ Sbjct: 234 PRYVARVVKNIKLAPSPKWMQRCLASNGIRPINNVVDITNYVMEEFGQPMHAFDLDTIAG 293 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + + VRRA GEK + LD +E+ L + I + +AGI+GG+++ D +L Sbjct: 294 NQIIVRRADEGEKFVTLDGKEHVLDSSILTIRDAEKAVGLAGIMGGENSMITDQVKTILF 353 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D NI S K +G TD+ +F++G+D + + LI G + Sbjct: 354 EAACFDGTNIRLSAKKIGNQTDASRKFDKGLDPNTAMDAINRACQLIEEFGAGEVVGGAV 413 Query: 394 -ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 + +P ++ F ++ + G D+ ED L+ LE + + + E+ P+WRQD Sbjct: 414 DVYPVKREPSRVKFEPEKINAMLGTDISREDQLKYLEAVDLKL--DEATGEIVAPTWRQD 471 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + D+ EE+ R +G D I + LP + + LS + + V + + Sbjct: 472 IHRNCDVAEEVARFFGYDNIPTT-LPHGEATAGK-LSFKNIVEGKARDVAEYCGFSQGMC 529 Query: 513 WSFISKE--QSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 +SF S + +L ++ +EI NP+ D S MRT L G+L + N +R + Sbjct: 530 YSFESPKVFDKLLVPADDPARKAIEISNPLGEDFSIMRTLSLNGMLNSLSTNYNRRNKNV 589 Query: 568 AIFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 ++E+ ++Y P ++ +ER +F F D Sbjct: 590 RLYELGNIYIPKQLP-----------------------VTELPDERMQFTLGFYGDGDFY 626 Query: 627 S---VIEPFVSL----DSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 + V+E F++ + + + S A S+ HPGR ++ + V+GY GE HP + + Sbjct: 627 TMKGVVEEFLTQLGMHEVIEYNSKAGKSFLHPGRQALVTYEGK-VIGYLGEIHPLVQKNY 685 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 G+ + + + LD +P + K ++ V RDL+ ++ + I A + +I+ Sbjct: 686 GIGDRV--YVAVLD-MPEILPFVSFDHKFTGIAKFPAVTRDLSMLIPKEIEAAAIEKVIR 742 Query: 739 NV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 ++++ + +FD+++G+ + G KS+A + + + T + DI M +I+ Sbjct: 743 QRGGKILESLKLFDIYEGEQVEAGFKSMAYSLSFRSKEKTLEESDITAAMKKIL 796 >gi|302386594|ref|YP_003822416.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium saccharolyticum WM1] gi|302197222|gb|ADL04793.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium saccharolyticum WM1] Length = 806 Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 235/841 (27%), Positives = 391/841 (46%), Gaps = 91/841 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DVS ++ D +T G +VE + + L + ++LS+ER+PD Sbjct: 1 MNTPLSWIKAYVPDLDVSAQEYTDAMTLTGTKVEGYECLDKNLEKIVVGQILSIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G + +Q+V GA NV+ G L G G +PE + + K Sbjct: 61 DKLIICQVDVGT-ETVQIVTGASNVKTGDKVPVVLDGGKVAGGHDGGPLPEEGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RGIES GMMCS +EL S++ + I LP D G + L L D + + +T Sbjct: 120 LRGIESCGMMCSIEELGFSNEMYPDAPESGIYILPEDTKTGADAVEVLGLHDSVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A ++ +SE I +K ++DS LC + V Sbjct: 180 SNRVDCYSVIGIAREAAATFHKPFIPPVVTATGNSEDINDYLKVTVEDSCLCPRYCARMV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 K +R +P WM++RL A G+R I+ +VDITNYV + G P H FD +++ + V+ A Sbjct: 240 KNIRLAPSPVWMQRRLAACGIRPINNIVDITNYVMEEYGQPMHAFDYELLANHEIIVKCA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+ LD QE L ++I + IAGI+GG+++ D ++ E A +D Sbjct: 300 KEGDTFQTLDGQERKLDGTILMINDGEKAVGIAGIMGGENSKITDQVKTMVFESACFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYK 400 NI S K +G+ TD+ +FE+G+D + LI L G I + Sbjct: 360 NIRLSSKKVGLRTDASGKFEKGLDPNNAEEAINRACQLIEELGAGEVVGGMIDVYQSKRE 419 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKAD 458 +++ F ++ RL G ++ + + +RL YDK E+ +P++RQD+ AD Sbjct: 420 GKRLPFEPDKMNRLLGTEIEPDTMVGYFKRLDLG----YDKAAGEILIPTFRQDLNCMAD 475 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA-----SRAMM----- 508 L EE R +G D+I P+ L E + R V R +A S+ M Sbjct: 476 LAEEAARFFGYDKI---PVSLPTGEATTGKLSYKLRVEEVAREVAEFCGFSQGMTYSFES 532 Query: 509 -EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 +V + I K+ + + + ILNP+ D S MRTS L G+L + N +R + Sbjct: 533 PKVFDRLLIPKDSPL-----RVTVNILNPLGEDFSVMRTSPLHGMLNSLSTNYNRRNKNV 587 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFD 620 ++E++++Y P+ ++ +ER +F D FD Sbjct: 588 RLYELANIY---LPKALP-------------------LTELPDERMQFTLGFYGDGDFFD 625 Query: 621 AKADALSVIEPFVSLDSLRFE-----SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 K VIE F + + ++ HPGR I + +GY GE HP + Sbjct: 626 MKG----VIEEFFDKTGMHEKPHYDPKSGKTFLHPGRQADIVYDG-VTIGYLGEVHPEVA 680 Query: 676 DFFGLSNPICGFEVYLDS-IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 D + + + + + S IP + R K ++ V RD++ +V + I G + Sbjct: 681 DNYKIGDRSYVAVIDMPSMIPFTSFDR----KYTGIAKYPAVSRDISMVVPKEILVGQIE 736 Query: 735 NIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 +I+ ++++ +FD+++G + G KSVA + + T + ++ +M +I+ Sbjct: 737 AVIQQRGGKILESYELFDIYEGSQILSGYKSVAYSITFRSGDHTLEEQEVLTVMKKILNG 796 Query: 794 V 794 + Sbjct: 797 L 797 >gi|87124489|ref|ZP_01080338.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. RS9917] gi|86168061|gb|EAQ69319.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. RS9917] Length = 816 Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 233/851 (27%), Positives = 410/851 (48%), Gaps = 82/851 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +LSWL+D + E + + L+ G EVE +D+ +L+ +V VL E +P+ D Sbjct: 1 MRVSLSWLQDLVQVTEPAEALAERLSMAGFEVETIDDLSSLAQGVVVGHVLERENHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R+D G + +Q+VCGA NVR G+ A G+ +P N+ + ++RG+ S GM+ Sbjct: 61 KLSVCRVDVGAAEPLQIVCGASNVRAGIHVPVATVGAVLPAVNLKIKAGELRGVASNGMI 120 Query: 119 CSEKELMLSD--DSASIMELPIDAP--VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL D +++E AP VG ++ L L D ++++++T NR D + + GI Sbjct: 121 CSLTELGQPSAVDGIAVLEELSSAPLVVGAPIAPVLGLDDVVLELAITANRPDGLSMTGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG-FAMCCVKGVR-NNVAPN 232 A ++ A L ++ P +E L + ++ G +A+ + GV + +P+ Sbjct: 181 AREVAALTGADLSLPALTPP--AEQGALAVDPASAEAMRAGGIYALTEINGVNASGPSPD 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRACS 283 W+++RL+ G+ S++ VD+TN V L+ G P H FDA + + +R+A Sbjct: 239 WLQRRLQRAGMNSVNPAVDLTNLVMLELGQPLHAFDADALERLCGNGVQAADFGLRQARQ 298 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GE LD ++ L P V+ + ++AG++G + +G TT + +E A++ ++ Sbjct: 299 GETFRGLDGRDLSLDPRAQVVTCNDMPIALAGVMGSEASGVTAQTTRIWLESAMFSAASV 358 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + G+ T++ R+E+G+ + + + SLI CGG + + Sbjct: 359 RNTARCAGLRTEASSRYEKGLPREVTLLAAQRACSLIQEHCGGQVGPTLVCEAPMAAAQP 418 Query: 404 IVFMNSEVKRLSG-IDVP-----IEDSL--RILERLGFSVIGEYDKFEVSV-PSWRQDVE 454 ++ + +L G +D P +ED R LE LG + ++V++ PS R D+ Sbjct: 419 LLLRRDALHQLLGPLDTPEGPEDLEDGAIERCLEALGCDLTSIEAGWQVAIPPSRRCDLV 478 Query: 455 EKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 + DL+EE+ R+ G D+ S P PL+ L+ QQ+ R ++++L + + EV Sbjct: 479 REVDLIEEVARLIGFDRFGSHLPDPLS----PGGLTPQQTAERRLRQLLCATGLQEVTTL 534 Query: 514 SFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 S + I NP+ A+ S++RTSL L+ RN+ + IFE+ Sbjct: 535 SLTGPSDD------DDRIAIANPLLAETSHLRTSLWDEHLRICQRNLQASQPGCWIFELG 588 Query: 574 HVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 HV+ R+G SG IE GRL ER K + L+ + Sbjct: 589 HVFS--------------RQGESGTIEQRGRLGGMICAERRLERWSSSGKPEPLNYYQAR 634 Query: 633 VSLD----SLRFE-SGAP----SWYHPGRSGIIKTSAEIV-----LGYFGEFHPNILDFF 678 L LR E S P HPGR SAE++ LG FG+ HP + + F Sbjct: 635 GLLTRLFAGLRLEVSDRPLRNDVRLHPGR------SAELILEGRPLGCFGQLHPLVSERF 688 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP----VKRDLAFIVDQHIPAGTLV 734 L GF++ L+ + + T++ + V +P ++RDLA +V + + L+ Sbjct: 689 DLPEQTYGFDLDLERL---LQAATRSNRWVPAFKPYPTVPAMERDLAVLVQRRQTSAELI 745 Query: 735 NIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I+ + L++ V + D F+G L + S A ++ + + T DD ++ + D++ + Sbjct: 746 QAIRKAGKPLLESVELIDRFEGGQLPSDQCSQAFRIRYRSQQATLTDDAVQPVHDKVRQA 805 Query: 794 VVKKTNAVLRS 804 +VK+ A LRS Sbjct: 806 LVKQFGAELRS 816 >gi|254385006|ref|ZP_05000340.1| phenylalanyl-tRNA synthetase beta chain [Streptomyces sp. Mg1] gi|194343885|gb|EDX24851.1| phenylalanyl-tRNA synthetase beta chain [Streptomyces sp. Mg1] Length = 668 Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 197/609 (32%), Positives = 311/609 (51%), Gaps = 45/609 (7%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L GLEVE V+ P + +VL++E Sbjct: 2 MRVPLSWLREYVDLPAGETGRDVAAKLVDAGLEVETVEQLGGGLTGPLVVGQVLTIEELE 61 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 R P C + TG+ QEI VCGA N VG V PG+ +P + I + RK Sbjct: 62 GFRKPIRFCTVDVGRANGTGEPQEI--VCGARNFSVGDKVVVVLPGAVLPGDFAIAS-RK 118 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS +EL + DD + I+ LP + VG + L+L D ++D+ +TP+R Sbjct: 119 TYGKTSHGMICSGEELGMGDDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIDITPDRGY 178 Query: 168 CIGVRGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 C+ +RG+A + A L++ +++ P S + ++D + C F V G Sbjct: 179 CMSLRGVAREAATAYGLPLRDPALLDVPAPNSYGYL-----VKVEDPAGCDRFTARTVTG 233 Query: 225 VRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 + +P W+ +RL+ G+R IS VD+TNYV L+ G P H +D SR+ + VRRA Sbjct: 234 LDPEARSPIWLTRRLQKAGMRPISLAVDVTNYVMLELGQPLHAYDRSRLDGAIGVRRAEQ 293 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN-----------TTDVL 332 GE+ LD + L +++VI +AG++GG + D+ TTDV+ Sbjct: 294 GEEFTTLDGVKRILDAEDLVITDSSGPIGLAGVMGGANTEIADSVTDPETGQVTGTTDVV 353 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A +D ++I+R+ + L + +++ RFERGVD + V L++ L GGTA Sbjct: 354 IEAAHFDSVSISRTARRLKLSSEASKRFERGVDPLAAAAAAQRTVDLLVLLAGGTAEAGV 413 Query: 393 IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 PR I + R++G++ E +R L+ +G V G+ D+ V+VPSWR D Sbjct: 414 TELIAPGAPRTIAMSANHPDRVAGMEYGRETVVRRLQEIGCDVYGQ-DELVVTVPSWRPD 472 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + E DL EE++R+ G + S L QV R L+ +Q R V R LA +E ++ Sbjct: 473 LAEPNDLAEEVIRLEGYANLPST---LPQVPSGRGLTARQQLHRRVGRALAGAGYVEALS 529 Query: 513 WSFISKE-----QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + F+ + Q ++ + ++NPIS + +RT+LLPGLL A RN R D Sbjct: 530 YPFLGEGVFDQLQLSAHDATRQVVRLVNPISDEEPALRTTLLPGLLGALRRNDSRGSHDL 589 Query: 568 AIFEVSHVY 576 A+FE V+ Sbjct: 590 ALFETGSVF 598 >gi|260435648|ref|ZP_05789618.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] gi|260413522|gb|EEX06818.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 8109] Length = 807 Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 224/840 (26%), Positives = 406/840 (48%), Gaps = 69/840 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ ++SWLK + + S++ + + L+ G EV+ +D+ A + +V VL E++P+ D Sbjct: 1 MRVSISWLKQLVQVNESVDDLSERLSMAGFEVDDIDDLSAQANGVVVGHVLEREKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G IQ+VCGA NVR G+ A G+ +P + + ++RG+ S GM+ Sbjct: 61 KLSVCSVDIGARDPIQIVCGASNVRAGIHVPVAMVGATLPAVGLTIKAGELRGVASNGMI 120 Query: 119 CSEKELMLSDDSASIM-------ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS EL L++ S I LP P G ++ L L D ++++++T NR D + + Sbjct: 121 CSLTELGLTEQSDGIAILDELDESLP---PNGSPVAPLLGLDDTVLELAITANRPDGLSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 GIA ++ A G+L + L + PL + D C +++ ++GV + + Sbjct: 178 VGIAREVAALTGGRLSLPELD--LDPSTTPLNTELD-----GCF-YSITRIEGVDGSKPS 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRA 281 P W++QRL+ G+ S++ +VD+TN V L++G P H FDA + + VR A Sbjct: 230 PTWLQQRLERGGVNSVNEVVDVTNLVMLEQGQPLHAFDADALEQLTGQAVDAKSFAVRSA 289 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE + LD+Q+ L V+ R ++AG++G +G +T ++ +E AL+ Sbjct: 290 RDGEIFVGLDDQKRSLDSRVQVVTCHDRPVAVAGVMGSLESGVTASTRNIWLESALFASP 349 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 + +S + LG+ TD+ RFE+G+ ++ +P +L+ + + N + Sbjct: 350 RVRQSARALGLRTDASSRFEKGLPVEMTLPCSARASALLSQEFSCSERGRWVGGNGPAEA 409 Query: 402 RKIVFMNSEVKRLSGI-----------DVPIEDSLRILERLGFSVIGEYDKFEV-SVPSW 449 ++ S + +L G D IE+ L+ LG + ++V + PS Sbjct: 410 EPVLLRRSALHQLLGPLDASDGPEDLDDTSIENCLKA---LGCQLSAHDQGWQVIAPPSR 466 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 RQD++ + DL+EE+ R+ G D+ ++ P PL + L+ Q R ++++ S + Sbjct: 467 RQDLQREVDLIEEVARLVGFDRFEAHLPDPL----EPGALTPHQRAERRLRQLFCSTGLQ 522 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 EV S + + ++ + I NP+ +D S++RT+L L+ RN+ + + Sbjct: 523 EVTTLSLVPASEQ------EQRIAISNPLLSDTSHLRTNLWEEHLQICVRNLKASQRGCS 576 Query: 569 IFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 +FE+ + Y Q + G+ I G RL + + + + D F A+ Sbjct: 577 VFEIGNTYSGSAEAVSQIAILGGV------ICGDRRLSTWATSGKPQAPDYFQARGVLTR 630 Query: 628 VIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 V+E + L R A HPGR+ + LG FG+ HP + + L Sbjct: 631 VMEALQLELSDHRLTDDA--RLHPGRAATLVLEGR-PLGCFGQLHPAMAEQLDLPEATYL 687 Query: 687 FEVYLDSIPISQKKRTK-TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 FE+ L + + + + T ++ +RDLA IVD+ A L+ I+ + L+ Sbjct: 688 FELDLARLLDAATRSNRWTPSFKQYPTVPFSERDLAVIVDRSSAAADLIKAIRKAGKPLL 747 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V + D F+G+ LG+ K S A ++ + +T DD I+ + D++ + K+ A LRS Sbjct: 748 EQVELVDRFEGEQLGDNKVSQAFRLRYRGKNETLTDDKIQPVHDKVRAALSKQFQAELRS 807 >gi|15836126|ref|NP_300650.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila pneumoniae J138] gi|8978966|dbj|BAA98801.1| phenylalanyl tRNA synthetase beta [Chlamydophila pneumoniae J138] Length = 792 Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 223/813 (27%), Positives = 386/813 (47%), Gaps = 59/813 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ ++ L+ + +S ++I + IG+E E ++N S +++ K+L +P+ Sbjct: 1 MRIPITLLQTYFSEPLSTKEILEACDHIGIEAE-IENTTLYSFASVITAKILHTIPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 D + T +E QVVCGAPN GL+ A PG+ + ++ + K+RG+ES Sbjct: 60 DKLRVATLTDGEKEHQVVCGAPNCEAGLIVALALPGAKLFDSEGQAYTIKKSKLRGVESQ 119 Query: 116 GMMCSEKELMLSD---DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + +++ELP P+G L+ L + +++SLTPN + C Sbjct: 120 GMCCGADELGLDELQIQERALLELPEATPLGEDLATVL--GNTSLEISLTPNLAHCASFL 177 Query: 173 GIALDLVAAGLGKLKEINISCP--LSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNV 229 G+A ++ + + N+ P S E++P D+ +D +C F+ + G+ Sbjct: 178 GLAREIC-----HVTQANLVIPKEFSFENLP-TTALDMGNDPDICPFFSYVVITGISAQP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P +++ L+A+ + I+A+VDITNY+ L G P H +DAS ++ D L V + + E L Sbjct: 232 SPIKLQESLQALKQKPINAIVDITNYIMLSLGQPLHAYDASHVALDSLRVEKLSTPES-L 290 Query: 289 ALDNQEYDLSPDNV-VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L N E L P V V+ D + + G++G K + TT +++ A + P + S Sbjct: 291 TLLNGETVLLPSGVPVVRDDHSLLGLGGVMGAKAPSFQETTTTTVIKAAYFLPEALRASQ 350 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVF 406 K L I ++S YRF RG+D Q ++P L+ + IL + T S I + I + +++ Sbjct: 351 KLLPIPSESAYRFTRGIDPQNVVPALQAAIHYILEIFPEATISPIYSSGEICRELKEVAL 410 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++R+ G IE + L+ LGFS + V VPS+R D+ E+ DLVEEI R Sbjct: 411 RPKTLQRILGKSFSIEILSQKLQSLGFSTTPQETSLLVKVPSYRHDINEEIDLVEEICRT 470 Query: 467 YGVDQIKSEPL----PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + P+ P+ +++ R LA+ + E + E Sbjct: 471 ESWNIETQNPVSCYTPIYKLK------------RETAGFLANAGLQEFFTPDLLDPETVA 518 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + E+ + S + +R+SLLPGLLK+ N++R FE+ VY + Sbjct: 519 LTRKEKEEISLQG--SKHTTVLRSSLLPGLLKSAATNLNRQAPSVQAFEIGTVYAKHGEQ 576 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFE 641 Q+ I +G R W K + + K ++ +S+D+L E Sbjct: 577 CQETQTLAILLTE---DGESRSWLPKPS-----LSFYSLKGWVERLLYHHHLSIDALTLE 628 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S A +HP + G+++ + G+ HP + + +P+ E+ LD + KK Sbjct: 629 SSALCEFHPYQQGVLRIHKQ-SFATLGQVHPELAKKAQIKHPVFFAELNLDLLCKMLKKT 687 Query: 702 TKTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSL 758 TK K ++ SS RDL V + IPA L ++ + ++ VT+ ++Q KSL Sbjct: 688 TKLYKPYAIYPSSF----RDLTLTVPEDIPANLLRQKLLHEGSKWLESVTIISIYQDKSL 743 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + DI R+V Sbjct: 744 ETRNKNVSLRLVFQDYERTLSNQDIEEEYCRLV 776 >gi|242278816|ref|YP_002990945.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio salexigens DSM 2638] gi|242121710|gb|ACS79406.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio salexigens DSM 2638] Length = 803 Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 178/586 (30%), Positives = 314/586 (53%), Gaps = 8/586 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M ++ WL+D + + ++++ D LT +GLE+E++ N EA+ + V+ +++P+ D Sbjct: 1 MLLSMQWLRDFVPYEGEVQELGDRLTMLGLELEEIFNPFEAIKDIVVGHVVECDKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + + +VCGAPNV G+ A G +P + + K+RG++S GM+ Sbjct: 61 KLSVCKVDVGDGELLDIVCGAPNVTKGINVPVAKVGVTMP-GDFKIKKAKLRGVKSHGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD IM LP D G + ++ + + D ++D+ +TPNR+DC+ + GIA + Sbjct: 120 CSERELELSDAHEGIMILPEDLKPGVKFTEAMNMEDTVLDLGITPNRADCLSMLGIARET 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A + I+ + + +K ++DD LC + ++G + +P+WMR RL Sbjct: 180 SLAFDLPITMPKINLVENGGNAADMLKIEIDDPDLCPLYQARILQGAKIAPSPDWMRYRL 239 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDL 297 +VG+R IS +VD+TNY+ + G P H FDA + + V A G K LD QE L Sbjct: 240 LSVGVRPISNIVDVTNYILFELGQPLHSFDADLLKGGKIRVGLAPEGTKFTTLDEQERKL 299 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +++I R ++AG++GG ++ +D++T+V++E A++ P I ++ + L + +++ Sbjct: 300 IGSDLLIWDAERPVALAGVMGGMNSEINDDSTNVVLESAVFRPGLIRKTARRLALPSEAS 359 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLSG 416 YRFERGVD Q + L+ L G S + ++ R + + G Sbjct: 360 YRFERGVDQQMNTFAMDRAAQLMSELSGAKVVSGVAKNEPTPWQNRTHDYRHKRCNSWLG 419 Query: 417 IDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 +D+ E S + +G V + D ++VS PS+R D+E +ADL EE+ R +G+D+I S Sbjct: 420 LDLEPEFSKKAFSLMGLEVNDSDADCWKVSTPSYRLDLEREADLYEEVARYFGMDKIPSV 479 Query: 476 PLPLTQVEDKRNLS-LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR-ELEI 533 +++ D ++ R +K + E +N+SF+ + L G + + I Sbjct: 480 LPRISKTFDASVIADTPYGFYRRIKNWGRGVGLHEAINYSFVGDDDLDLLGLPKEGRVNI 539 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 NP+S D + MRT L PGLL N+ + +FE++ + D Sbjct: 540 ANPLSEDQNVMRTELAPGLLNTVRHNLAQGNTHIRVFEIAKKFIKD 585 >gi|15618504|ref|NP_224790.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila pneumoniae CWL029] gi|33241949|ref|NP_876890.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila pneumoniae TW-183] gi|4376889|gb|AAD18733.1| phenylalanyl tRNA Synthetase Beta [Chlamydophila pneumoniae CWL029] gi|33236459|gb|AAP98547.1| phenylalanyl-tRNA beta chain [Chlamydophila pneumoniae TW-183] Length = 792 Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 223/813 (27%), Positives = 385/813 (47%), Gaps = 59/813 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ ++ L+ + +S ++I + IG+E E ++N S +++ K+L +P+ Sbjct: 1 MRIPITLLQTYFSEPLSTKEILEACDHIGIEAE-IENTTLYSFASVITAKILHTIPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 D + T +E QVVCGAPN GL+ A PG+ + ++ + K+RG+ES Sbjct: 60 DKLRVATLTDGEKEHQVVCGAPNCEAGLIVALALPGAKLFDSEGQAYTIKKSKLRGVESQ 119 Query: 116 GMMCSEKELMLSD---DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + +++ELP P+G L+ L + +++SLTPN C Sbjct: 120 GMCCGADELGLDELQIQERALLELPEATPLGEDLATVL--GNTSLEISLTPNLGHCASFL 177 Query: 173 GIALDLVAAGLGKLKEINISCP--LSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNV 229 G+A ++ + + N+ P S E++P D+ +D +C F+ + G+ Sbjct: 178 GLAREIC-----HVTQANLVIPKEFSFENLP-TTALDMGNDPDICPFFSYVVITGISAQP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P +++ L+A+ + I+A+VDITNY+ L G P H +DAS ++ D L V + + E L Sbjct: 232 SPIKLQESLQALKQKPINAIVDITNYIMLSLGQPLHAYDASHVALDSLRVEKLSTPES-L 290 Query: 289 ALDNQEYDLSPDNV-VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L N E L P V V+ D + + G++G K + TT +++ A + P + S Sbjct: 291 TLLNGETVLLPSGVPVVRDDHSLLGLGGVMGAKAPSFQETTTTTVIKAAYFLPEALRASQ 350 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVF 406 K L I ++S YRF RG+D Q ++P L+ + IL + T S I + I + +++ Sbjct: 351 KLLPIPSESAYRFTRGIDPQNVVPALQAAIHYILEIFPEATISPIYSSGEICRELKEVAL 410 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++R+ G IE + L+ LGFS + V VPS+R D+ E+ DLVEEI R Sbjct: 411 RPKTLQRILGKSFSIEILSQKLQSLGFSTTPQETSLLVKVPSYRHDINEEIDLVEEICRT 470 Query: 467 YGVDQIKSEPL----PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + P+ P+ +++ R LA+ + E + E Sbjct: 471 ESWNIETQNPVSCYTPIYKLK------------RETAGFLANAGLQEFFTPDLLDPETVA 518 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + E+ + S + +R+SLLPGLLK+ N++R FE+ VY Sbjct: 519 LTRKEKEEISLQG--SKHTTVLRSSLLPGLLKSAATNLNRQAPSVQAFEIGTVYAK---H 573 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFE 641 G++Y +G R W K + + K ++ +S+D+L E Sbjct: 574 GEQYQETQTLAILLTEDGESRSWLPKPS-----LSFYSLKGWVERLLYHHHLSIDALTLE 628 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S A +HP + G+++ + G+ HP + + +P+ E+ LD + KK Sbjct: 629 SSALCEFHPYQQGVLRIHKQ-SFATLGQVHPELAKKAQIKHPVFFAELNLDLLCKMLKKT 687 Query: 702 TKTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSL 758 TK K ++ SS RDL V + IPA L ++ + ++ VT+ ++Q KSL Sbjct: 688 TKLYKPYAIYPSSF----RDLTLTVPEDIPANLLRQKLLHEGSKWLESVTIISIYQDKSL 743 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + DI R+V Sbjct: 744 ETRNKNVSLRLVFQDYERTLSNQDIEEEYCRLV 776 >gi|326331243|ref|ZP_08197536.1| phenylalanyl-tRNA synthetase, beta subunit [Nocardioidaceae bacterium Broad-1] gi|325950969|gb|EGD43016.1| phenylalanyl-tRNA synthetase, beta subunit [Nocardioidaceae bacterium Broad-1] Length = 593 Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 195/608 (32%), Positives = 320/608 (52%), Gaps = 47/608 (7%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 MK LSW+K+++D ++ +E+I D LT++GL++E ++ A P + +VL+ E+ P Sbjct: 1 MKAPLSWIKEYVDLPAELGIEEITDRLTALGLKLEAIETSGAGIEGPLVVGQVLTAEKEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + C + D E Q +VCGA N G V PG +P N ++ RK Sbjct: 61 QKNGKVINWCTVDVGDANGTGEPQGIVCGAHNFVPGDKVVVILPGGVLP-GNFQISARKT 119 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS +EL L +++ I+ LP DAP G + L L + II+ + P+R+ Sbjct: 120 YGHMSAGMICSARELGLGEEADGIIVLPADAPAPGTDAREVLGLGEEIIEFEINPDRAYA 179 Query: 169 IGVRGIALDLVAAGLGKLKEINISC----PLSSES-IPLEIKFDLDDSSLCKGFAMCCVK 223 + +RGIA D A LG + P+++E+ P++I +D+ C F + Sbjct: 180 LSMRGIARD---AALGFEAPFHDPAQRDTPVANEAGYPVQI----EDTDGCDLFVARTIT 232 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G P+++++RL+AVG+RSIS VD+TNYV + G P H +D +++ + VRRA Sbjct: 233 GFDPAAPTPDFIKKRLEAVGVRSISLAVDVTNYVMFELGQPIHAYDRAKLQGPIVVRRAN 292 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +GEK+ LD L P+++V+ D + G++GG ++TTD+L+EVA W+P + Sbjct: 293 AGEKLETLDGTVRVLDPEDLVVCDDSGPIGLGGVMGGARTEVSESTTDLLIEVAHWEPRS 352 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGTASDICIARNITYKP 401 + R+G+ + +++ R ERG D + + PV + +V L++ GG + A T P Sbjct: 353 MFRTGRRHKLTSEAGKRNERGTD-RLLPPVSAQRVVELLVEHGGGVVEEGVTAVGPTASP 411 Query: 402 R------KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 + +I R+ GIDV +E ++ LE +G V E D VP++R D+ + Sbjct: 412 QTRAPLTEITIAADLPARIIGIDVSVETVVKSLELVGCQVSVEGDSLTAKVPTYRTDLVD 471 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL+EE+ RI G D++ P L + R L+ Q R + R LA ++EVV++ F Sbjct: 472 PYDLIEEVARIVGYDKV---PSVLPRRATGRGLTRAQQLRRRIGRALAGAGLVEVVDFPF 528 Query: 516 ISKEQSVLFGGG-----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + + G + +++ NP+S++ T+LLPGLLK RNV R Sbjct: 529 VGEADFDRLGLAADDVRRHTVKLANPLSSEEPGYTTTLLPGLLKVAARNVSRGQDG---- 584 Query: 571 EVSHVYEN 578 VS +Y+N Sbjct: 585 -VSALYQN 591 >gi|16752446|ref|NP_444706.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila pneumoniae AR39] gi|12643969|sp|Q9Z7W0|SYFB_CHLPN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|7189089|gb|AAF38035.1| phenylalanyl-tRNA synthetase beta chain [Chlamydophila pneumoniae AR39] Length = 792 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 223/813 (27%), Positives = 385/813 (47%), Gaps = 59/813 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ ++ L+ + +S ++I + IG+E E ++N S +++ K+L +P+ Sbjct: 1 MRIPITLLQTYFSEPLSTKEILEACDHIGIEAE-IENTTLYSFASVITAKILHTIPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 D + T +E QVVCGAPN GL+ A PG+ + ++ + K+RG+ES Sbjct: 60 DKLRVATLTDGEKEHQVVCGAPNCEAGLIVALALPGAKLFDSEGQAYTIKKSKLRGVESQ 119 Query: 116 GMMCSEKELMLSD---DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + +++ELP P+G L+ L + +++SLTPN C Sbjct: 120 GMCCGADELGLDELQIQERALLELPEATPLGEDLATVL--GNTSLEISLTPNLGHCASFL 177 Query: 173 GIALDLVAAGLGKLKEINISCP--LSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNV 229 G+A ++ + + N+ P S E++P D+ +D +C F+ + G+ Sbjct: 178 GLAREIC-----HVTQANLVIPKEFSFENLP-TTALDMGNDPDICPFFSYVVITGISAQP 231 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKIL 288 +P +++ L+A+ + I+A+VDITNY+ L G P H +DAS ++ D L V + + E L Sbjct: 232 SPIKLQESLQALKQKPINAIVDITNYIMLSLGQPLHAYDASHVALDSLRVEKLSTPES-L 290 Query: 289 ALDNQEYDLSPDNV-VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L N E L P V V+ D + + G++G K + TT +++ A + P + S Sbjct: 291 TLLNGETVLLPSGVPVVRDDHSLLGLGGVMGAKAPSFQETTTTTVIKAAYFLPEALRASQ 350 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVF 406 K L I ++S YRF RG+D Q ++P L+ + IL + T S I + I + +++ Sbjct: 351 KLLPIPSESAYRFTRGIDPQNVVPALQAAIHYILEIFPEATISPIYSSGEICRELKEVAL 410 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++R+ G IE + L+ LGFS + V VPS+R D+ E+ DLVEEI R Sbjct: 411 RPKTLQRILGKSFSIEILSQKLQSLGFSTTPQETSLLVKVPSYRHDINEEIDLVEEICRT 470 Query: 467 YGVDQIKSEPL----PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + P+ P+ +++ R LA+ + E + E Sbjct: 471 ESWNIETQNPVSCYTPIYKLK------------RETAGFLANAGLQEFFTPDLLDPETVA 518 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 L + E+ + S + +R+SLLPGLLK+ N++R FE+ VY + Sbjct: 519 LTRKEKEEISLQG--SKHTTVLRSSLLPGLLKSAATNLNRQAPSVQAFEIGTVYAKHGEQ 576 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFE 641 Q+ I +G R W K + + K ++ +S+D+L E Sbjct: 577 CQETQTLAILLTE---DGESRSWLPKPS-----LSFYSLKGWVERLLYHHHLSIDALTLE 628 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 S A +HP + G+++ + G+ HP + + +P+ E+ LD + KK Sbjct: 629 SSALCEFHPYQQGVLRIHKQ-SFATLGQVHPELAKKAQIKHPVFFAELNLDLLCKMLKKT 687 Query: 702 TKTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSL 758 TK K ++ SS RDL V + IPA L ++ + ++ VT+ ++Q KSL Sbjct: 688 TKLYKPYAIYPSSF----RDLTLTVPEDIPANLLRQKLLHEGSKWLESVTIISIYQDKSL 743 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + DI R+V Sbjct: 744 ETRNKNVSLRLVFQDYERTLSNQDIEEEYCRLV 776 >gi|167748860|ref|ZP_02420987.1| hypothetical protein ANACAC_03634 [Anaerostipes caccae DSM 14662] gi|167651830|gb|EDR95959.1| hypothetical protein ANACAC_03634 [Anaerostipes caccae DSM 14662] Length = 806 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 227/835 (27%), Positives = 401/835 (48%), Gaps = 79/835 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +SW++ ++ D D ++++ D +T G VE + + L + K+LS+E++PD Sbjct: 1 MNTPISWIRAYVPDLDCTIQEYVDKMTLSGSNVECYEELDKNLEKIVVGKILSIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G + +Q+V GA NV G L G GS PE + + K Sbjct: 61 DKLIICQVDVGT-ENVQIVTGAKNVSEGDLVPVVLAGGKVAGGHDGSPNPEEGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ S GMMCS +EL S D I D G + + L D +++ +T Sbjct: 120 LRGVPSFGMMCSVEELGTSRDMYPEAPEEGIYIFQKDVKPGDDAVEAMGLRDQVVEFEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC + G+A + A + ++ + E + IK ++D+ LC + V Sbjct: 180 SNRVDCFSMIGMAREAAATFRKEFHPPVVTKTGNGEDVNDFIKVTVEDTDLCPRYTARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P WM++RL A+G+R I+ LVDITNYV + G P H +D I+ + + VRRA Sbjct: 240 KNIKLAPSPEWMQRRLAAMGIRPINNLVDITNYVMEEYGQPMHAYDLDTIAGNEIIVRRA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+K LD +E +L D ++I + +AGI+GG+++ D+ +L E A ++ Sbjct: 300 KDGDKFTTLDGEERNLDSDVLMICDGEKEVGLAGIMGGENSMVTDDIKTLLFEAACFNGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 NI S K +G+ TD+ +FE+G+D + + + LI L G I A ++ +P Sbjct: 360 NIRLSSKRIGLRTDASSKFEKGLDPENAMAAMDRACQLIEELGAGEV--IGGAVDVYPEP 417 Query: 402 RKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEK 456 ++ V + EV +++ G ++ +E+ + R+ EYD ++ +PS+RQD+ Sbjct: 418 KQPVCLPLEVDKINALLGTNISMEEMIEYFRRIDV----EYDMNSNQLRIPSFRQDLNCM 473 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSF 515 ADL EE+ R YG D I P+ L + E + R + R A + + +SF Sbjct: 474 ADLAEEVARFYGYDNI---PVTLPRGEATAGKKPFKIRVEDIARESAEQNGFSGGMCYSF 530 Query: 516 ISKEQSVLF----GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + + G +RE ++I NP+ D S MRT L G++ + N + ++ Sbjct: 531 ESPKVFDMLLIPEGAKEREAIKISNPLGEDFSIMRTVSLNGMMTSLANNYSHRNQNVRLY 590 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFDAK 622 E ++Y + PE + + G+ G G ++ K E+ + + L A Sbjct: 591 EFGNIYIPKALPLTELPEERMQLTLGMY-------GDGDFFTLKGVLEDILKDLGLGGAS 643 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 + PF+ HPGR + + Y G+ HP + +G+ Sbjct: 644 EYIPTREHPFM---------------HPGRQADVLIRGQKA-AYIGQMHPQAAENYGMKG 687 Query: 683 PICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 EVY+ I P+ ++ T +K ++ +KRDL+ +V + I G + I ++ Sbjct: 688 -----EVYVAVIDMPVLTEQATFDRKYTGVAKFPAMKRDLSMVVKKEIFVGQIEKIFRDK 742 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 +L++ +FDV++G + +G KSVA + + T + ++ ++D+I+E + Sbjct: 743 GGKLLEGFELFDVYEGDQIEKGYKSVAYSLTFRAQDRTLEEAEVNKIVDKILEEL 797 >gi|300813181|ref|ZP_07093555.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300495839|gb|EFK30987.1| phenylalanine--tRNA ligase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 803 Score = 277 bits (709), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 233/823 (28%), Positives = 391/823 (47%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD L+ D V + + LT G+E+ V + LS + +L+ E+ Sbjct: 1 MLVSYNWLKDFLNMDGVDPYALAEKLTRSGVEIASTVHPEDGLSKLVVGHILTCEKIEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G+ + Q+VCGAPNV G + A PGS +P + + K+RGIES GM+ Sbjct: 61 HLNKTTVDVGEDEARQIVCGAPNVAAGQDVIVALPGSHLP-GGIKIKKGKLRGIESNGMI 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +EL SD D + P D G + L + D ++D +TPNR+D Sbjct: 120 CGLQELGFSDSVVPPKYADGIWVFHDP-DLKPGDSVFAALGMDDYVLDFDITPNRADTSS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-LDDSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + +I L + F + D + + + + GV+ Sbjct: 179 MEGAAYE-VGALIDQKPKIE-DVVLKEDGADWTGDFTAVADEKIAPKYYLRKLTGVKIAE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--LTVRRACSGEKI 287 +P W++ RL G+R I+ +VD TNYV L G P H +DA + VR A GEK+ Sbjct: 237 SPLWLQARLWNAGIRPINNVVDATNYVMLLTGQPMHAYDAKLFDKTKKIEVRLAKEGEKL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +E DL P ++VI + +AG++GG ++ + TTDV++E A++DP ++ Sbjct: 297 QLLNEKEIDLDPQDIVITDGEQAVGLAGVMGGLNSEVTEETTDVILEAAVFDPALTRKAA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKI 404 TD+ FE+G++ L I +LIL G A +I A ++ + I Sbjct: 357 LRHDNRTDASALFEKGINWDNTQKALD-ICALILRANAGATVLAGEIK-ASDLDKEAVVI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S ++ G D+ +++ ++IL +L F V D++ V+VP+ R D+ +D+ EEI Sbjct: 415 TTTASRTNKILGTDLSMDEIVKILGKLNFPVAVNGDEYTVTVPNRRWDIFIDSDIFEEIG 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D IKS P T E + + + R+++++L + + E +N+S S+E + F Sbjct: 475 RIYGYDNIKSTH-PATG-ELTGGYAADEVKVRHLRQLLEGQGLSETINYSLTSEELATTF 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ P+++ + MR +L+ GLL N R + +FE VY D G Sbjct: 533 VKKALAPVKVNWPLNSARTTMRQNLICGLLDTVAYNFARKQTELQLFENGRVY--DMEGG 590 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + G+ G W K E VD + K V E + + + + + Sbjct: 591 DYHEHEHLAAAYVGLAGESN-WQHKDE----VVDFYYVKGQLEDVFE-MIGVKDVEYRAE 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHP--NILDFFGLSNPICGFEVYLDSIPISQKKR 701 A HP R+ I + E + G G+ P + D I +E+ LD++ K Sbjct: 645 AIKGMHPTRTAGIYVNDEYI-GLIGQISPVLTMTDKNFAGKEIYVYELNLDALLPLMAKG 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 K+K + V+RDL+ +VD+ + + + IK N + + V V DV+QG L Sbjct: 704 VKSKPAPKYPA---VQRDLSILVDEDVTNAQVESCIKENAGKYLVSVEVIDVYQGAHLAA 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++ +T D + +D + + +K A +R Sbjct: 761 GKKSLAYRLTFLNEAETLTDVVVTKAIDNVQAALEEKLEANIR 803 >gi|291547813|emb|CBL20921.1| phenylalanyl-tRNA synthetase beta subunit [Ruminococcus sp. SR1/5] Length = 805 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 238/839 (28%), Positives = 394/839 (46%), Gaps = 88/839 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKTYVPDLDVTAQEYTDAMTLTGTKVEGFTELDADLDKIVIGQIDKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ +++ G + +Q+V GAPNV+ G L G G P + + K Sbjct: 61 DKLIICQVNIGT-ESVQIVTGAPNVKEGDKVPVVLDGGRVAGGHDGKMTP-GGIKIKKGK 118 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ES GMMCS +EL + + I P DA VG L L D + + +T Sbjct: 119 LRGVESFGMMCSIEELGSTREMYPEAPEYGIYIFPEDAVVGESAVKALGLDDVVFEYEIT 178 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC GV GIA + A K + + E +K ++D LC + V Sbjct: 179 SNRVDCYGVLGIAREAAATFQKKFCPPIVEVKENDEKASDYVKVTVEDPELCPRYCARVV 238 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRA 281 K V+ +P WM++ L + G+R I+ LVDITNYV + G P H +D I++ + VRRA Sbjct: 239 KNVKIGPSPKWMQRCLASNGIRPINNLVDITNYVMEEFGQPMHAYDLDTIANQEIVVRRA 298 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDG-RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 EK + LD QE + +NV++ DG + IAGI+GG+++ D+ VL E A +D Sbjct: 299 GKDEKFVTLDGQE-RIMDENVLMICDGEKAVGIAGIMGGENSMITDDVKTVLFEAACFDG 357 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARN 396 +I S K +G+ TD+ +FE+G+D + L+ L G D+C + Sbjct: 358 TSIRLSSKRIGLRTDASGKFEKGLDPNNAQAAIDRACQLMEELGAGEVVGGMVDVC---S 414 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 T +P ++ F ++ +L G + E+ + L R+ + + D E+ P++RQD+ Sbjct: 415 ETREPSRVKFEPEKINKLLGTSLTKEEMIDYLGRVELAYDEKTD--EIVAPTFRQDIHCN 472 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSF 515 AD+ EE+ R YG D+I P+ L E + R + V R +A E +++SF Sbjct: 473 ADVAEEVARFYGYDKI---PMTLPTGEATTGKLPFKLRIQEVARDIAEYCGFSEGMSYSF 529 Query: 516 ISK---------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 S E S L ++ + I NP+ D S MRTS L G+L + N +R D Sbjct: 530 ESPKVFDKLCIPEDSDL----RKVITISNPLGEDYSIMRTSTLNGMLASLSTNYNRRNKD 585 Query: 567 FAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 ++E+ ++Y + P+ + G+ G G D FD Sbjct: 586 VRLYELGNIYLPKSLPVTELPDERTMFTLGMY-------GKG--------------DFFD 624 Query: 621 AKADALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 K E + ++ SG P + HPGR + ++V GY GE HP + D + Sbjct: 625 MKGVCEEFFEKIGMKKKVTYDPNSGKP-FLHPGRQANMIYEGKVV-GYLGEVHPAVADNY 682 Query: 679 GLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 + G + Y+ I I + K ++ V RDL+ +V + AG + I Sbjct: 683 SI-----GEKAYIAVIDILDVLEFAGFNHKYTGIAKYPAVTRDLSLVVPHAVLAGQIEEI 737 Query: 737 I-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + +++ +FD+++G + +G KS+A ++ + T +++I M +I+ + Sbjct: 738 FDQRGGNILESYQLFDIYEGAQIEKGFKSMAYSLVFRAHDKTLGENEISAAMKKIMNGL 796 >gi|154505814|ref|ZP_02042552.1| hypothetical protein RUMGNA_03354 [Ruminococcus gnavus ATCC 29149] gi|153793832|gb|EDN76252.1| hypothetical protein RUMGNA_03354 [Ruminococcus gnavus ATCC 29149] Length = 806 Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 226/830 (27%), Positives = 384/830 (46%), Gaps = 73/830 (8%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSWLK ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWLKAYVPDLDVTAQEYTDAMTLSGTKVEGYEQLDADLEKIVIGQIDKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGL----------LGVWAPPGSCIPENNMIVNVR 107 D + +++ G + +Q+V GA NV G + PG +P + + Sbjct: 61 DKLVVCQVNVGT-ETVQIVTGAKNVFEGAKVPVVLDGGRVAGGHEPGQKVP-GGIKIKKG 118 Query: 108 KIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 K+RG+ S GMMCS +EL + D I P DA +G + L+ +D + + + Sbjct: 119 KLRGVASFGMMCSIEELGSTTDMYPEAPEDGIYIFPEDAEIGASAIEALDRNDVVFEYEV 178 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 T NR DC V GIA + A + + + E + IK ++D+ LC + Sbjct: 179 TSNRVDCYSVLGIAREAAATFNKEFVPPIVKETGNGEDVNDYIKVTVEDADLCPRYCARV 238 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRR 280 VK ++ +P WM++RL +VG+R I+ LVDITNYV + G P H +D I+ + V+ Sbjct: 239 VKNIKIGPSPKWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLDTIAGHEIVVKT 298 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 A GEK LD QE + D ++I + IAGI+GG+++ D+ +L E A +D Sbjct: 299 AQDGEKFTTLDGQERIMDKDVLMICDGEKAVGIAGIMGGENSMITDDVKTMLFEAACFDG 358 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITY 399 +NI +S K +G+ TD+ +FE+G+D + L+ L G + Sbjct: 359 VNIRKSSKRVGLRTDASGKFEKGLDPNNAKAAIDRACQLVEELGAGEVVGGTVDVYGKVK 418 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKA 457 +P ++ F ++ + G + E+ L ++ EYD+ EV P++R D+ A Sbjct: 419 EPVRVPFDADKINAMLGTSISEEEMLGYFAKISL----EYDEAAKEVIAPTFRHDLFRIA 474 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 DL EE+ R +G D I + LP + + LS + K + + + +SF S Sbjct: 475 DLAEEVARFFGYDNIPT-TLPKGEATTGK-LSFKLRIEDVAKDIAEFCGFSQGMTYSFES 532 Query: 518 ----KEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 + + RE +EI+NP+ D S MRT+ L G+L + N +R + ++E+ Sbjct: 533 PKVFDKLRIPADSKLRETVEIMNPLGEDYSVMRTTSLNGMLTSLATNYNRRNKNVRLYEL 592 Query: 573 SHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV-------DLFDAKAD 624 ++Y P ++ EER +F D F K Sbjct: 593 GNIYLPKQLP-----------------------ITELPEERMQFTLGMYGEGDFFSMKGV 629 Query: 625 ALSVIEPFVSLDSLRFESGAPSWY-HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 E + ++ A Y HPGR I ++V GY GE HP + D +G+ Sbjct: 630 VEEFFEKIGMNEKETYDPNAGKTYLHPGRQANIIYDGKVV-GYLGEVHPEVADTYGIGER 688 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDR 742 + LD +P T +K ++ V RD++ +V + I G + ++I K Sbjct: 689 --AYVAVLD-MPEIIPYATFDRKYTGIAKYPAVTRDISMVVPKEILVGQIEDVIEKKGGA 745 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 ++ +FD+++G + G KSVA ++ + T + D+ M+RI++ Sbjct: 746 YLESYALFDLYEGSQIKAGFKSVAYSIVFRAKDKTLEEADVTSAMNRILK 795 >gi|239917938|ref|YP_002957496.1| phenylalanyl-tRNA synthetase beta subunit [Micrococcus luteus NCTC 2665] gi|239839145|gb|ACS30942.1| phenylalanyl-tRNA synthetase beta subunit [Micrococcus luteus NCTC 2665] Length = 859 Score = 276 bits (707), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 238/878 (27%), Positives = 388/878 (44%), Gaps = 94/878 (10%) Query: 1 MKFTLSWLKDHLDTDVS--LEKICDTLTSIGLEVEKVDN--REALSPFTIVKVLSVERNP 56 M+ L WL++ + E + L +GLE E V E P + +VLS E P Sbjct: 1 MRIPLDWLREFVPVPAEHRAEDVMADLVRVGLEEEDVHRPAAELQGPIVVGQVLSKEPEP 60 Query: 57 DLD------CAILRIDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + C++ + G Q + +VCGA N VG V PG+ +P Sbjct: 61 QKNGKTINWCSVRVVPEGAEQPLTGEGIEPSGVQGIVCGAHNFEVGDKVVVTLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSAS----IMELPIDAPVGGRLSDYLELSDP 155 + ++ RK G S GM+ S EL + DD + +L +D G D L+L Sbjct: 120 GDFRISPRKTYGHVSAGMIASSTELGMGDDGTDGIIVLGDLGLDPEPGTDARDVLDLHGE 179 Query: 156 IIDVSLTPNRSDCIGVRGIALDLV-AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL- 213 ++++TP+R +RG+A + A G+ P +++ ++ DD+ + Sbjct: 180 AAEINVTPDRGYAFSMRGVAREYAHATGVPFTDPAAAIHPPAADDAGPAVRI-ADDAPIH 238 Query: 214 ----CKGFAMCCVKGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 F V GV P W+ RL+ G+R+IS VDI+NYV + G P H +D Sbjct: 239 GEPGATRFVARTVSGVDATRPTPPWLAARLRLAGIRTISLPVDISNYVMWELGQPLHFYD 298 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 A +S + VRRA +GE + LD +E +L P++++IA D +AG++GG D T Sbjct: 299 ADTLSGEIVVRRARAGETLTTLDGKERELDPEDLLIADDSGPIGLAGVMGGAATEVTDAT 358 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T ++VE A +DP++IAR+ + + +++ R ERGVD + + V L++ L GGTA Sbjct: 359 TTIVVESANFDPVSIARTRRRHRLPSEASKRNERGVDWEVADEAAERAVQLLVELAGGTA 418 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI------GEYDKF 442 +P + L G+ ++ + L LG V G + Sbjct: 419 EPGVTDVGTRPEPAVVEMAADFPSALVGVAYTTDEVVETLRALGAEVRVTEAADGAAPRL 478 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V+ PSWR D+ DL EE+ R+ G D I S +P+ R + +Q++ R V L Sbjct: 479 TVTAPSWRTDLRIPEDLAEEVARLRGYDAIPSV-VPVAP--PGRGFTRRQAQRRRVSAAL 535 Query: 503 ASRAMMEVVNWSFISKEQSVLFGG-----GQ--RELEILNPISADMSNMRTSLLPGLLKA 555 A+ + EV+ + F+S+EQ+ FG GQ + + NPI++ ++R SLLPGL++ Sbjct: 536 AAAGLTEVLAYPFVSEEQNRRFGADSDAQGQALAMVALANPIASQYRHLRLSLLPGLVET 595 Query: 556 TGRNVDRAIADFAIFEVSHVY--------------------------ENDTPEGQKYMAA 589 RN+ R D A++E+ V+ E P Q + A Sbjct: 596 ARRNLGRGFRDLALYEMGLVFLPGAQLGSATIPPRAVHPSAEVLADLEAGIP-AQPWHVA 654 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G+ G G + R VD DA A AL V + V L G +H Sbjct: 655 GLYAGHDSAPG--------PDHDPRPVDWQDAVAGALDVAD--VLGVELTVRQGRHHAFH 704 Query: 650 PGRSG---IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 PGR ++ + V+G GE HP L+ L V+ + + Sbjct: 705 PGRVAELVVVTEHGDRVVGVAGELHPQWLEAEDLP---ARTSVWELDLDALCAAAAEIVV 761 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 LS+ +D+A +VD+ + AG + + + L++ V +FDV++G + EG+KS+ Sbjct: 762 AAPLSTFPVSTQDVALVVDEAVVAGDVRATLAEGAGELLEAVELFDVYRGAGVPEGRKSL 821 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 A + + T +++ ++ AV R Sbjct: 822 AFSLRFRAPDRTLTAEEVSEARAAATALAAQRHGAVQR 859 >gi|317470300|ref|ZP_07929693.1| phenylalanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] gi|316902208|gb|EFV24129.1| phenylalanyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA] Length = 806 Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 227/835 (27%), Positives = 401/835 (48%), Gaps = 79/835 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +SW++ ++ D D ++++ D +T G VE + + L + K+LS+E++PD Sbjct: 1 MNTPISWIRAYVPDLDCTIQEYVDKMTLSGSNVECYEELDKNLEKIVVGKILSIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ ++D G + +Q+V GA NV G L G GS PE + + K Sbjct: 61 DKLIVCQVDVGT-ENVQIVTGAKNVSEGDLVPVVLAGGKVAGGHDGSPNPEEGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RG+ S GMMCS +EL S D I D G + + L D +++ +T Sbjct: 120 LRGVPSFGMMCSVEELGTSRDMYPEAPEEGIYIFQKDVKPGDDAVEAMGLRDQVVEFEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC + G+A + A + ++ + E + IK ++D+ LC + V Sbjct: 180 SNRVDCFSMIGMAREAAATFRKEFHPPVVTKTGNGEDVNDFIKVTVEDTDLCPRYTARVV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P WM++RL A+G+R I+ LVDITNYV + G P H +D I+ + + VRRA Sbjct: 240 KNIKLAPSPEWMQRRLAAMGIRPINNLVDITNYVMEEYGQPMHAYDLDTIAGNEIIVRRA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+K LD +E +L D ++I + +AGI+GG+++ D+ +L E A ++ Sbjct: 300 KDGDKFTTLDGEERNLDRDVLMICDGEKEVGLAGIMGGENSMVTDDIKTLLFEAACFNGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 NI S K +G+ TD+ +FE+G+D + + + LI L G I A ++ +P Sbjct: 360 NIRLSSKRIGLRTDASSKFEKGLDPENAMAAMDRACQLIEELGAGEV--IGGAVDVYPEP 417 Query: 402 RKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEK 456 ++ V + EV +++ G ++ +E+ + R+ EYD ++ +PS+RQD+ Sbjct: 418 KQPVCLPLEVDKINALLGTNISMEEMIEYFRRIDV----EYDMNSNQLRIPSFRQDLNCM 473 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSF 515 ADL EE+ R YG D I P+ L + E + R + R A + + +SF Sbjct: 474 ADLAEEVARFYGYDNI---PVTLPRGEATAGKKPFKIRVEDIARESAEQNGFSGGMCYSF 530 Query: 516 ISKEQSVLF----GGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + + G +RE ++I NP+ D S MRT L G++ + N + ++ Sbjct: 531 ESPKVFDMLLIPEGAKEREAIKISNPLGEDFSIMRTISLNGMMTSLANNYSHRNQNVRLY 590 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS--EERCRFVDLFDAK 622 E ++Y + PE + + G+ G G ++ K E+ + + L A Sbjct: 591 EFGNIYIPKALPLTELPEERMQLTLGMY-------GDGDFFTLKGVLEDILKDLGLGGAS 643 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 + PF+ HPGR + + Y G+ HP + +G+ Sbjct: 644 EYIPTREHPFM---------------HPGRQADVLIRGQKA-AYIGQMHPQAAENYGMKG 687 Query: 683 PICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 EVY+ I P+ ++ T +K ++ +KRDL+ +V + I G + I ++ Sbjct: 688 -----EVYVAVIDMPVLTEQATFDRKYTGVAKFPAMKRDLSMVVKKEIFVGQIEKIFRDK 742 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 +L++ +FDV++G + +G KSVA + + T + ++ ++D+I+E + Sbjct: 743 GGKLLEGFELFDVYEGDQIEKGYKSVAYSLTFRAQDRTLEEAEVNKIVDKILEEL 797 >gi|322516547|ref|ZP_08069463.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124] gi|322124935|gb|EFX96355.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124] Length = 685 Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 206/710 (29%), Positives = 354/710 (49%), Gaps = 48/710 (6%) Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL L D+ + I LP DA G + YL+L D II++S+TPNR+D + Sbjct: 1 MICSLAELGLPDNIIPKEFADGIQILPEDAVPGDSIFPYLDLDDEIIELSITPNRADALS 60 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 +RG+A + VAA GK P++ +S P K + +S +A V+ V Sbjct: 61 MRGVAHE-VAAIYGKSVHFP-EKPVTEDSKPASDKISVAIESDKVATYASRVVENVTVQP 118 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKIL 288 +P W++ L G+R I+ +VD+TNYV L G P H FD + D + R A GEK++ Sbjct: 119 SPQWLQNLLMNAGIRPINNVVDVTNYVLLYFGQPMHAFDLDKFEDSRIVARDAREGEKLV 178 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E +L+ +++VI + ++AG++GG D+N+ +V++E A++D ++ ++ Sbjct: 179 TLDGEERELTTEDIVITVADKPVALAGVMGGASTEIDNNSKNVVLEAAVFDGKSVRKTSS 238 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFM 407 L + ++S RFE+G++ ++ L +++ L GT + A ++ +P ++ Sbjct: 239 RLNLRSESSSRFEKGINNDTVLEALDFAAAMLQELANGTVLAGRVQAGSVDTEPVQVSTS 298 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V G + D + +LGF + G+ DKF VSVP R D+ +ADLVEEI RIY Sbjct: 299 LDYVNVRLGTALTFADIEDVFAKLGFGLTGDADKFTVSVPRRRWDISIQADLVEEIARIY 358 Query: 468 GVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 G E LP T E L+ Q R V+ + + E+++++ + E++V F Sbjct: 359 GY-----EKLPTTLPEAAGTAGELTETQVLRRKVRTIAEGAGLTEIISYALTTPEKAVEF 413 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 L E++ P++ D S +R +++ G+L NV+R ++ AI+E+ V+E Sbjct: 414 AVTPSNLTELMWPMTVDRSALRQNMVSGMLDTVAYNVNRKNSNVAIYEIGKVFEQKG-NP 472 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA------DALSVIEPFVSLDS 637 ++ + I + I SG + + + VD F AK D L V +V+ Sbjct: 473 KEELPNEINTFAFAI--SGLVAEKDFQTKATPVDFFYAKGIVEALFDKLEVSVDYVATKD 530 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 L + HPGR+ I + + G+ G+ HP +G+ E Y+ I +S Sbjct: 531 L-------ASMHPGRTAAIVLDGQTI-GFLGQVHPQTAKNYGIP------ETYVAEINLS 576 Query: 698 --QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII--KNVDRLIDDVTVFDVF 753 + + V ++ V RD+A ++ I +++ I V RL+ V +FDV+ Sbjct: 577 AVEDALQPDQPFVEITKFPAVSRDIALLLKAEITHQEVLDAIYFAGVKRLV-AVKLFDVY 635 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G+ LG G KS+A + Q D D+++ M++I + + +K A +R Sbjct: 636 AGEKLGAGMKSMAYSLTFQNPNDNLTDEEVAKYMEKITKALTEKVKAEVR 685 >gi|194476528|ref|YP_002048707.1| Phenylalanyl-tRNA synthetase beta subunit [Paulinella chromatophora] gi|171191535|gb|ACB42497.1| Phenylalanyl-tRNA synthetase beta subunit [Paulinella chromatophora] Length = 827 Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 232/845 (27%), Positives = 419/845 (49%), Gaps = 61/845 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD 59 M+ +L WLK+ ++ D S++KI L+ +G EVE V+ + L +V VL + +P+ D Sbjct: 1 MRVSLQWLKELVNFDWSVDKISQQLSLVGFEVEAVEILKELHKDIVVGFVLQIYPHPNTD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I +D G+ IQ+VCGA N++ G+ A G IP + + + RG+ S+GM+ Sbjct: 61 KLKICWLDIGESNPIQIVCGASNIKEGIHVPIAKNGVVIPAKGITIKSSEFRGVLSSGMI 120 Query: 119 CSEKELMLSDDSA----SIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS +EL S ++ ++ P +G +S L +D I+++++T NR D + + G Sbjct: 121 CSFEELGKQKSSTNGIVALEDILDQVPNLGTAVSLILGSNDTILELAITANRPDSLSIIG 180 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG-FAMCCVKGVRNNVAPN 232 IA ++ A G+L+ S +P+ + + + G +++ + +R +P Sbjct: 181 IAREIAALTGGELRFPAKSPINEVRFLPISVSEETNHIMKHGGIYSITEISNLRVMPSPL 240 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI---------SDVLTVRRACS 283 WM++RL++ G++ I+ +VDI NYV +++G P FD + + +L++R+ + Sbjct: 241 WMQRRLESSGIQPINNIVDIINYVMIEQGQPMRAFDTNALDKLSTSPLNPSLLSLRQGNN 300 Query: 284 GEKILALD-NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE I ++ + +S +++++ D +AG+ G + + TT + +E A++ P + Sbjct: 301 GESINFINCDHLIKVSSESLLVTYDDHPIELAGVTGTSFSDVSNLTTSIWLEAAVFSPQD 360 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 + S + G+ T+S RFE+GV + + LK ++L+ L G + + T + Sbjct: 361 VRISARQAGLRTESSSRFEKGVPKELTLISLKRAITLLQELANGKIGNTWTNQYETNIVK 420 Query: 403 KIVFMNSEVKRL--------SGIDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQ- 451 I + + +L G P+ D RIL LG S+ + +EV VPS RQ Sbjct: 421 PINLCRNNLHKLLGPIQVDTKGATEPLADECIERILISLGCSLNMTDNGWEVIVPSNRQL 480 Query: 452 DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D++ + DL+EEI R+ G+D + P P+ LS Q+ R +K +L + EV Sbjct: 481 DLQREVDLIEEIARLVGLDNFTTHLPDPIL----PGVLSNYQTVERKLKSLLIYSGLQEV 536 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 V S + + + + I NP+ + S++R SL P +KA RN+ + + F Sbjct: 537 VTLSLVPPVTTDERIDLPKRVAIANPLLTETSHLRESLWPEHIKAARRNLQASQTGYWAF 596 Query: 571 EVSHVYE---NDTPEGQKYMAAGIRKGSSGIEGSGRLW--SDKSEERCRFVDLFDAKADA 625 E+ HV+ + P Q + +GI G E + W SDK E + + A+ Sbjct: 597 EIGHVFRFVSKEKPPEQLLILSGIICG----ERNRSCWAISDKEIEP----NYYYARG-I 647 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGL 680 L I ++L + + S HPGR+ EI++ G+FG+FHP + L Sbjct: 648 LEEIFASMALLASDYPLKRNSLLHPGRA------TEIIVEGYPTGWFGQFHPELAIHNNL 701 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVN-IIK 738 FE L+ + ++ + TK + + P RDL+ IV + + L+N I+K Sbjct: 702 PESTYLFEFKLEKLLLAGTQETKLNPLFRPFATAPASDRDLSMIVPFGLSSSDLLNSILK 761 Query: 739 NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + L++ + D F G+ LGEGK S+ ++ + +K+T D D+ I+ +R++ N+ ++ Sbjct: 762 AGNPLLESAKLIDCFDGQQLGEGKCSLTFRLRYRSMKETLTDKDVNIVHNRLINNLKEQF 821 Query: 799 NAVLR 803 VLR Sbjct: 822 QIVLR 826 >gi|212697340|ref|ZP_03305468.1| hypothetical protein ANHYDRO_01909 [Anaerococcus hydrogenalis DSM 7454] gi|212675789|gb|EEB35396.1| hypothetical protein ANHYDRO_01909 [Anaerococcus hydrogenalis DSM 7454] Length = 792 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 230/827 (27%), Positives = 394/827 (47%), Gaps = 66/827 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAI 62 L W D++ D L+ I D L+ G VE V+ + L + KVL E++P+ D + Sbjct: 5 LIWQNDYIKLDEDLKTITDRLSETGSHVESVNFISDKLEGLVVGKVLKQEKHPNADKLFV 64 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 L ID G +EI +V A N + G + GS I N ++ GI S GM+ S K Sbjct: 65 LTIDVG--EEITIVTSAKNTKEGDYLIVIKSGSEI--NGQKIDDHDFFGIVSQGMLTSYK 120 Query: 123 ELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 E+ D ++ L + G + L + P+I+ +TPNR DC+ + G+A Sbjct: 121 EIGYDDSVVEKKSKDGVIVLSGEFNPGTPAVEVLFSNTPVIEYEITPNRPDCLSIIGMAR 180 Query: 177 DLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 + A+ K+ + P S+ +EIK S CK F VK V+ +P Sbjct: 181 ESAASFDKKITYPSTEYPTVSDKKDQYFNGIEIK-----SKNCKRFTGRIVKNVKIGESP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITN+V L+ G P H +D + D + VR A GE I L Sbjct: 236 QWLKNCLMLAGMRPVNNVVDITNFVMLETGQPLHAYDLETLHDRKIIVRDAKEGEVIKTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E L+ + +VI+ +AGI+G + ++T +L+E A +D NI +S K L Sbjct: 296 DGEERKLNEEVLVISDGKEAIGLAGIMGSMDSEITEDTKTILLEAANFDSDNIRKSSKFL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMNS 409 + +++ RFE+ + ++ K + LI L G + I P K+ S Sbjct: 356 NLRSEASSRFEKEISVENAEFASKRAMKLITDLGIGDVLEDHFDEGIKESPENKVKLRIS 415 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + L G + ++++ L+ L F V + D E +P +R D+ +ADL+EE+ R+YG Sbjct: 416 RLNSLIGREFSKDEAISYLKSLEFEVRDIDDDTIEAKIPDFRMDISIEADLIEEVARLYG 475 Query: 469 VDQIKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGG 526 + +++S+PL + Q +K ++ L + +K L + E+ +SFIS ++ L Sbjct: 476 MGKVESKPLYSSLQRGEKTSMRLLKDE---LKNNLFGQKFSEITTYSFISPRDYDKLLVD 532 Query: 527 GQREL----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY---END 579 +L +I+NP+ D S MRT+LL +L +N+ + D +E+ + +D Sbjct: 533 ENSKLRDYIKIINPLGEDYSVMRTTLLSNMLDTFSKNIAKKQKDLRFYEIGTTFIKGGDD 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 PE ++Y+ G L+ D S F DL D A++ R Sbjct: 593 LPEEKQYLTMG-------------LYGDYS-----FYDLKDFFIKAMNK----TGFKGFR 630 Query: 640 FESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 FE+ +HPGR I + + G G+ +++ F + NP E+ L I + Sbjct: 631 FETEENIKTFHPGRCANIYLDGQKI-GIMGQISYEVMEEFKIKNPALALEINLSMI---K 686 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKS 757 K+ K LS + RD +F D+ + + ++ + II+ D L+ ++ +FD++ G Sbjct: 687 DKKIDQVKYKALSKFPSILRDYSFTCDRDVESQSIEDKIIEKADGLVRNIEIFDIYTGDQ 746 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + EGKKS++ +V T +D+++ + +E++ K+ N LRS Sbjct: 747 IEEGKKSISYKVAYGKNDATLKDEEVEKIEKAFLEDLSKE-NINLRS 792 >gi|283769007|ref|ZP_06341913.1| phenylalanyl-tRNA synthetase, beta subunit [Bulleidia extructa W1219] gi|283104364|gb|EFC05741.1| phenylalanyl-tRNA synthetase, beta subunit [Bulleidia extructa W1219] Length = 730 Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 218/754 (28%), Positives = 376/754 (49%), Gaps = 59/754 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MK + +WL ++D +S ++ +LT G EVE ++ S I +++ + P+ Sbjct: 1 MKLSYNWLSQYVDLKGISPTELAQSLTRSGHEVEGLNTLANASGLVIGEIIESDLIPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ H Q++CGAPN R GL + A PG+ +P ++ + + G+ES GM+C Sbjct: 61 LHKAQVRISNHDVKQIICGAPNCRSGLKVIVALPGAKLPIGE--ISAKSLHGLESYGMLC 118 Query: 120 SEKEL-----MLSDDSAS-IMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 S KEL +L++ + I ELP +APVG + YL L D I+DVSLT NRSDC+ + Sbjct: 119 SLKELGVDLKLLNEAQINGIEELPQEAPVGETDVLAYLGLDDTILDVSLTANRSDCLSIW 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG-VRNNVAP 231 +A + VAA +G+ ++ P + + F + S + + V G ++ +P Sbjct: 179 AMARE-VAAIVGR----KVTLPELQKHVEKPSSFQVVLKSEKAPYYLGKVIGHIKVGPSP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS----DVLTVRRACSGEKI 287 W+++ L + G+ SI+ +VDI+NYV L+ G P H + +++ +V+ RR EKI Sbjct: 234 KWLKEVLISSGINSINNVVDISNYVMLETGQPLHFYQLNKLKNHSIEVVDGRR----EKI 289 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 ALD E+ L +++VI ++G IAGI+GG+ + DD T + +E A + P+ I + Sbjct: 290 KALDGMEFQLESEDIVIETNGTFAGIAGIMGGEESMIDDETVAIFMEAAHFSPVQIRHTS 349 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVF 406 L ++T++ RF +G+D ++ L++ GG + + Y P KI Sbjct: 350 IRLNLVTEAASRFIKGIDPLAAQQAIQRATDLLVEWADGGEIEETVEVGHDGYTPIKIKE 409 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + ++ G + +LERL F+ + + D+ +PS+R+D+E AD+ EE++R+ Sbjct: 410 SLTRLNQVLGTKFTMNQVTSVLERLNFAPLVQGDEVVCHIPSYRRDMELAADVQEEVIRL 469 Query: 467 YGVDQIKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS--VL 523 G D +++ LP + +RN +Q R + L S + E+V ++ SKE+S L Sbjct: 470 LGYDDLET-TLPRMEANVGERN--ERQVAKRKTRETLISLGLQEIVTYTLQSKEESEKSL 526 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + G+ + + P+S S++RTSL+ +L + N+ A +E+S VY Sbjct: 527 WPLGEA-IVLSMPMSEARSHIRTSLMRSVLASAQYNIAHKNYPLAFYEISKVY------- 578 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDK---SEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 A G + I G DK EE+ D + K +S +E F L R Sbjct: 579 ----AKGSEQERLAIFLEGNYQEDKLFGLEEKS---DFYTLKGIIMSWLEKF-GLPQERI 630 Query: 641 ESGAPSWY----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 E + Y HP RS ++ + LG FGE HP + + L + E+ L+ Sbjct: 631 EINENNRYDDHFHPYRSALVNLDGQF-LGVFGEVHPKLQKEYSLKEALYA-EIDLEVFYQ 688 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 ++ R K++ S + RD+A +V + +PA Sbjct: 689 AKIDRLHFKELDRYPS---IDRDIALVVKKDVPA 719 >gi|258654258|ref|YP_003203414.1| phenylalanyl-tRNA synthetase subunit beta [Nakamurella multipartita DSM 44233] gi|258557483|gb|ACV80425.1| phenylalanyl-tRNA synthetase, beta subunit [Nakamurella multipartita DSM 44233] Length = 845 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 259/882 (29%), Positives = 393/882 (44%), Gaps = 117/882 (13%) Query: 1 MKFTLSWLKDHLD----------TDVSLEKICDTLTSIGLEVEKVDNREALSPFT----I 46 M+ +L WL D L D + + DTL IG EVE V + P T + Sbjct: 1 MRLSLEWLSDALTLPAGAGVDGGVDGGVGGVADTLVRIGFEVEDV---HLVPPTTGDLVV 57 Query: 47 VKVLSVERNPDLDCAI--LRIDTG-------KHQEIQVVCGAPNVRVGLLGVWAPPGSCI 97 +VLS+E L I ++D G + ++CGA N VG V A PG+ + Sbjct: 58 GRVLSIEELTGLKKPIRFCQVDVGPGHGPDGSDEPRGIICGATNFVVGDSVVVALPGTTL 117 Query: 98 PENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMEL-------------PIDAPVGG 144 P I + RK G S GM+CS +EL L + I+ L P AP G Sbjct: 118 PGGFQIAS-RKTYGHVSDGMICSNRELGLGQEHDGILVLASASDAGSGPAGEPAPAP-GT 175 Query: 145 RLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP----LSSESI 200 + D +I++++TP+R + VRG+A +L AA ++ + P L S Sbjct: 176 DARPIIGADDAVIELAITPDRGYALSVRGLARELAAA-----YDLPFTDPGVRDLPERSG 230 Query: 201 PLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLD 259 P L D C F V+G+ +P WMR+RL A G+RSIS VD+TNYV ++ Sbjct: 231 P-GWPVTLADPVGCGRFVTVRVQGIDPTAPSPYWMRRRLSAAGIRSISLAVDVTNYVMVE 289 Query: 260 RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 G P H FDA +++ +TVRRA GE ++ LD + L D++V+A S+AG++GG Sbjct: 290 LGQPLHAFDADKLAGPITVRRATQGESLVTLDGTKRTLVADDLVVADSSGAISLAGVMGG 349 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 + TT+V++E A WDP I R+ + + +++ RFER VD + L Sbjct: 350 ESTEISAQTTNVIIEGAYWDPPVIMRTVRRHRLPSEAARRFERSVDPAVAAVATERAAEL 409 Query: 380 ILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRI--LERLGFSVIG 437 ++ GGT R + E +RL I P E S+ + LE+LG V G Sbjct: 410 LVRYGGGTVVGRSDVRGEPVPRPAVELAVGEPERL--IGRPYERSVIVGRLEQLGCEVGG 467 Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 + V PSWR D+ ADLVEE+ R+ G D I S L L+ Q R R Sbjct: 468 GGTELTVQPPSWRPDLLRPADLVEEVARLEGFDSIPSV---LPTAPAGTGLTPSQRRERL 524 Query: 498 VKRVLASRAMMEVVNWSF---ISKEQSVLFGGGQRELEIL--NPISADMSNMRTSLLPGL 552 + LAS + EV+++ F ++ L R +L NP+ AD M T+LL GL Sbjct: 525 IAADLASAGLTEVLSFPFQNVADLDRLDLPADDARRSMVLVANPLDADRPAMATTLLTGL 584 Query: 553 LKATGRNVDRAIADFAIFEVSHVY----ENDTP---------------------EGQKYM 587 L RN+ R D ++FE+ V+ TP Q Sbjct: 585 LDTVLRNMSRGSRDLSVFEIGSVFLPRRNAPTPPEVGVDRRPDPQTLAVLDASLPNQPVH 644 Query: 588 AAGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 A + G+ +G G GR W+D E R A A ++R + Sbjct: 645 VAAVLAGARERTGWWGPGRPAGWADAVELARRIA----ATAGV-----------TVRVVA 689 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 + +HPGR I+ + +G+ GE P +++ GL E+ LD +P Q Sbjct: 690 AEQAPWHPGRCASIRV-GDWPIGFAGELAPKVVERLGLPPRTAALELNLDGLPARQ---- 744 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEG 761 T +S+ PV D+A +V +PA + +++ L++ + +FDV+ G + G Sbjct: 745 -TPTAPQISAFPPVNLDVALVVPDSVPAAEVAQALRSGAGELLESLRLFDVYSGDQVPAG 803 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +S+A ++++ T + + DR V + AVLR Sbjct: 804 HRSLAFALVVRAPDRTLTAAEATAVRDRAVA-ATDRLGAVLR 844 >gi|227501363|ref|ZP_03931412.1| phenylalanine--tRNA ligase [Anaerococcus tetradius ATCC 35098] gi|227216462|gb|EEI81872.1| phenylalanine--tRNA ligase [Anaerococcus tetradius ATCC 35098] Length = 795 Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 222/807 (27%), Positives = 388/807 (48%), Gaps = 56/807 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M L W KD++ D L+ I D L+ G VE+V + L I +V+ +++P+ D Sbjct: 1 MLVPLIWQKDYVKIDKDLKTITDRLSETGSHVEEVTIHTSKLDGVLIGQVIDQKKHPEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L ID GK + I ++ A N + G G+ + ++ I+ GI S GM+ Sbjct: 61 RLQVLTIDVGKDKPITIITNAKNTKKGDYLPVITSGTKL-DDGTIIEDHDFFGIVSEGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + EL D ++ L + G LSD + + P+I+ +TPNR+DC+ + Sbjct: 120 TAYSELGYDDSVIPKDLREGVIVLEGEYEAGSLLSDAIFSNTPVIEYEITPNRADCLSII 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + A+ K+ ++ + E I + S CK F VK V+ +P Sbjct: 180 GMARESAASFGEKITYPSLDFSANDEDIKYYSEGIEILSKSCKRFVARVVKNVKIGKSPQ 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 W++ L G+R I+ +VDITN+V L+ G P H +D +++D + VR A GE + LD Sbjct: 240 WLQNYLMLAGMRPINNIVDITNFVMLETGQPLHAYDLDKLADKKIIVRDAKEGEILKTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L +VIA +AGI+GG + D+T ++L+EVA +D NI +S K LG Sbjct: 300 GVDRKLDSSMLVIADGKEAIGLAGIMGGMDSEVTDDTQNILLEVANFDASNIRKSSKTLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 + +++ RFE+G+ ++ K + LI L G + + +I K K ++ + Sbjct: 360 LRSEASSRFEKGISVEMADFASKRAMKLICDL--GIGEVVGGSFDIGEKKEKEKTVDLRL 417 Query: 412 KR---LSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIY 467 KR L+G+D ++ ++R LE L F V D+ V VP +R D++ +ADL+EE++R+Y Sbjct: 418 KRLRMLTGVDFNLDTAIRNLELLEFEVEKLDDETLRVRVPYFRSDIDIEADLIEEVVRLY 477 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTR-YVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G+ I+S PL + KR ++ R R + + L + E+ +SFIS ++ G Sbjct: 478 GMGNIESAPLVSSL---KRGERSKRRRLRDDLSQKLVGQKFSELATYSFISPKEYDRLGI 534 Query: 527 GQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT- 580 + ++++NP+ D S MRTS +P +L +N+ D FE+ +E + Sbjct: 535 DESSPLRNYIKLINPLGEDYSVMRTSQVPSMLDVIAKNIKYGQKDMRFFELDRTFEKTSD 594 Query: 581 --PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 P+ + G+ S F DL D + + V + Sbjct: 595 LLPKENITLTMGLYGNYS------------------FYDL----KDFFTEVMAGVGFEGF 632 Query: 639 RFESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 +++ ++ +H GR I E + G GE + D + + E+ L I Sbjct: 633 NYKANENTYAFHRGRCADIYFDGEKI-GIMGEISYEVRDEYDIDKGALILEINLAKI--- 688 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 + R +K + ++RD +F+ D+++ A + N I+ N L+ +++FD++ G+ Sbjct: 689 EDIRVVERKYKAIGKFPAIERDYSFVCDRNLEAELIENTIRENGQGLVAKISLFDIYTGE 748 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + E KKS++ +VL + T +D DI Sbjct: 749 HIEEDKKSISYKVLYRANDRTLKDKDI 775 >gi|150389427|ref|YP_001319476.1| phenylalanyl-tRNA synthetase subunit beta [Alkaliphilus metalliredigens QYMF] gi|149949289|gb|ABR47817.1| phenylalanyl-tRNA synthetase, beta subunit [Alkaliphilus metalliredigens QYMF] Length = 797 Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 224/832 (26%), Positives = 408/832 (49%), Gaps = 65/832 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER---NPD 57 M +++WLK+++ D S++ D +T G +VE V+ E + V +E+ +P+ Sbjct: 1 MNVSINWLKEYVKIDESIKVFADQMTMSGSKVEMVE--EVAKDMKGIVVGHIEKILPHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D I++++ G +Q+V GA N+ G A G+ + ++ + K+RG S G Sbjct: 59 ADKLVIVKVNIGDEM-LQIVTGATNINEGDYVPVAVHGAQLA-GDLKIKKGKLRGEVSEG 116 Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL I L P+G + L L+D + + +T NR DC+ Sbjct: 117 MLCSLDELGFGKSVIPEEVKDGIWILDQAYPLGSDALEVLSLTDQVAEFEITSNRPDCLS 176 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G+A + A +L NI+ + E ++ ++++ C + +K V+ + Sbjct: 177 MMGMAREAAATFRKELNYPNINLTETKEKSGDYVQVKIENNEKCPRYLARVIKNVKIGPS 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ +L G+R I+ +VD+TNYV L+ G P H FD ++ D + +R A SGE++ Sbjct: 237 PIWLQLKLMKSGVRPINNIVDVTNYVMLEYGQPLHAFDIDAVAGDEIIIRNATSGEEMKT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + L+ ++I ++ +IAG++GG+ + TT VL+E A ++ I ++ K Sbjct: 297 LDGVQRKLNESMLMITDKEKLLAIAGVMGGEESEITPKTTTVLLESANFEADGIRKTSKT 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 LG+ T++ ++E+G+D + + LI L G + A ++ P+ +N Sbjct: 357 LGLRTEASSKYEKGLDPNLVQIAAERACQLIAEL--GAGEILMGAVDVYITPKGNRQLNV 414 Query: 410 EVKRLSGI---DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V++++G+ V E+ + +L+ L + E+++P++R D+ E+AD+ EEI R+ Sbjct: 415 SVEKINGLLGTQVSPEEMIALLKPLEIKAENMNGRLELTIPTFRDDLVEEADIAEEIARM 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--------- 517 YG D+I S V + + Q + K +L + E++ +SF+S Sbjct: 475 YGYDKIISTMAKGNIVAGGK--TNGQKIEDFTKDILNAMGFNEILTFSFVSPKSVDKIEL 532 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 +E S+ +R +++LNP+ + S MRT+LLP +L+ RN++R + FE+ +++ Sbjct: 533 REDSL----KRRFVKLLNPLGDETSVMRTTLLPNMLEVLSRNINRNVKFVRAFEMGNIFL 588 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD- 636 E + + + I G+ G EE D F K +++E D Sbjct: 589 -PKDEALEILPSEIPNLVMGMYG---------EE-----DFFTLKGAIEALLEQLGIEDI 633 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICG---FEVYLD 692 + E+ P+ +HPGR I + G FGE HP +L+ + + C F V L+ Sbjct: 634 QVEVENYHPT-FHPGRCASILVGQHTI-GTFGEIHPKVLENYDIDERCYCAEIDFSVLLE 691 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFD 751 +S+ +R L + RD A ++ I + IIK N +++ T+FD Sbjct: 692 ---LSRMERLYEP----LPKYPAITRDFAVVLKNDITVKQIEGIIKDNGGNILESFTLFD 744 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++QG + EG KSVA + + + T DDD+ IL D+I+ + +K +LR Sbjct: 745 IYQGSQIPEGHKSVAYSITYRDKERTLTDDDVNILHDQILTQIREKLEGILR 796 >gi|172040798|ref|YP_001800512.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium urealyticum DSM 7109] gi|171852102|emb|CAQ05078.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium urealyticum DSM 7109] Length = 855 Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 239/872 (27%), Positives = 405/872 (46%), Gaps = 85/872 (9%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + +WL L T V E + +G E E + + P I KV ++E Sbjct: 1 MLISQNWLTRILQTANPSWSVDSEDLDAGFVRVGFETEGYERLPKTEGPLVIGKVSNIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + + E Q ++CGA N G + A PG+ +P ++ RK Sbjct: 61 LEGFKKPIRYCEVAVGEANGTGEPQNIICGARNFAEGDYVIVALPGTVLP-GPFEISARK 119 Query: 109 IRGIESTGMMCSEKELMLSDDSA----SIMELPIDA---PVGGRLSDYLELSDPIIDVSL 161 G S GMMCS EL L D ++ ++ E I A +G L L D + +V++ Sbjct: 120 TYGKVSEGMMCSASELGLYDGTSPGIITVSEEEIKANGLGIGDDARGLLGLDDTVFEVNV 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEIN-------------ISCPLSSESIPLEIKFDL 208 TP+R + RG+A +L ++ + ++ P E I + ++ Sbjct: 180 TPDRGYALSARGLARELASSFELQYRDPALDPAAAALDDDLFAGIPGIEEDI---LTLEV 236 Query: 209 DDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 + + C F + V+G+ V +P W+++ L G R ++A D+TNYV + G P H F Sbjct: 237 AEDAKCSLFGIRKVEGIDPKVESPLWLQRELMLCGQRPVNAATDVTNYVMMLLGQPMHAF 296 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 DA +I+ L V RA G+ + LD E LS ++VVI+ D IQS+AG++GG + D Sbjct: 297 DAGKITGNLRVHRAAEGDTLTTLDGVERTLSSEDVVISDDSGIQSLAGVMGGSTSEISDE 356 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG- 386 T DVL E A WD + +AR+ + + ++S RFERG D + L VSL++ + GG Sbjct: 357 TVDVLFEAAHWDELTVARTCRRHKLSSESSRRFERGTDAAVIGNALDFAVSLLVRIAGGK 416 Query: 387 TASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD---- 440 + + + P I + +++G+ P ++ L +G +V G D Sbjct: 417 VVNGRTMVGEVPSMP-TIKMHTNRPGKVAGMIYPDGTTIGRLREVGCTVRETGLRDGQGA 475 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + EV+ P+WR D+ ADLVEE+LR+ G++ I S LP V R L+ +Q R V Sbjct: 476 RQIEVTPPTWRPDLTIPADLVEEVLRLEGLENIPSV-LPHAPV--GRGLTPRQRLRRRVG 532 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLK 554 +A E++ FI+ + +G + + +++ NP+ +D +++ T+LLP ++ Sbjct: 533 HAMAWNGFAEILPTPFIANDVFDEWGLAEDDPRRNVVKVQNPLESDHASLGTTLLPSMID 592 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKY---MAAGIRKGSSGIEGSGRLWSDKSEE 611 A RN R D A+F V V PE ++ M A ++ S E + E Sbjct: 593 ALRRNSARGQKDVALFGVEQVSLPRLPESERKPTPMPAVTQRPS---EAELDELAQTLPE 649 Query: 612 RCRFVDLFDAKADAL----SVIEPFVSLDSL--------------RFESGAPSWYHPGRS 653 + +V + A AL E F + D+ F + +HPGR Sbjct: 650 QPLYVAMVAAGQRALQGPWGGAENFEAQDAFEAARLIGRAAGVEVEFRNAEFLPWHPGRC 709 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 I +V G+ GE HP + + + E+ LD++P+++ R KV S+ Sbjct: 710 AEILVDGTVV-GHAGELHPQVCERSNIPARSIALEIDLDALPVAE--RFPQPKV---SAF 763 Query: 714 HPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 PV +D+A +VD+ +P + +++ L++ + +FD+++ +SLG+GK+S+ + + Sbjct: 764 PPVYQDVALVVDEDLPVAEVQKVLQEGAGELLESIRLFDIYESESLGQGKRSLTFSLSFR 823 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +D+ ++ K A LRS Sbjct: 824 ATDRTLTEDEASEGRRAAIDAATAKLGAELRS 855 >gi|325685812|gb|EGD27884.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 803 Score = 274 bits (701), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 231/823 (28%), Positives = 391/823 (47%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD L+ D V + + LT G+E+ V + LS + +L+ E+ Sbjct: 1 MLVSYNWLKDFLNMDGVDPYALAEKLTRSGVEIASTVHPEDGLSKLVVGHILTCEKIEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G+ + Q+VCGAPNV G + A PG+ +P + + K+RGIES GM+ Sbjct: 61 HLNKTTVDVGEDEARQIVCGAPNVAAGQDVIVALPGAHLP-GGIKIKKGKLRGIESNGMI 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +EL SD D + P D G + L + D ++D +TPNR+D Sbjct: 120 CGLQELGFSDSVVPPKYADGIWVFHDP-DLKPGDSVFAALGMDDYVLDFDITPNRADTSS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-LDDSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + +I L + F + D + + + + GV+ Sbjct: 179 MEGAAYE-VGALIDQKPKIE-DVVLKEDGADWTGDFTAVADEKIAPKYYLRKLTGVKIAE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--LTVRRACSGEKI 287 +P W++ RL G+R I+ +VD TNYV L G P H +DA + VR A GEK+ Sbjct: 237 SPLWLQVRLWNAGIRPINNVVDATNYVMLLTGQPMHAYDAKLFDKTKKIEVRLAKEGEKL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +E DL P ++VI + +AG++GG ++ + TTDV++E A++DP ++ Sbjct: 297 QLLNEKEIDLDPQDIVITDGEQAVGLAGVMGGLNSEVTEETTDVILEAAVFDPALTRKAA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKI 404 TD+ FE+G++ L I +LIL G A +I A ++ + I Sbjct: 357 LRHDNRTDASALFEKGINWDNTQKALD-ICALILRANAGATVLAGEIK-ASDLDKEAVVI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S ++ G D+ +++ ++IL +L F V D++ V+VP+ R D+ +D+ EE+ Sbjct: 415 TTTASRTNKILGTDLSMDEIVKILGKLNFPVAVNGDEYTVTVPNRRWDIFIDSDIFEEVG 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D IKS P T E + + + R+++++L + + E +N+S S+E + F Sbjct: 475 RIYGYDNIKSTH-PATG-ELIGGYAADEVKVRHLRQLLEGQGLSETINYSLTSEELATTF 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ P+++ + MR +L+ GLL N R + +FE VY D G Sbjct: 533 VKKALAPVKVNWPLNSARTTMRQNLICGLLDTVAYNFARKQTELQLFENGRVY--DMEGG 590 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + G+ G W K E VD + K V E + + + + + Sbjct: 591 DYHEHEHLAAAYVGLAGESN-WQHKDE----VVDFYYVKGQLEDVFE-MIGVKDVEYRAE 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHP--NILDFFGLSNPICGFEVYLDSIPISQKKR 701 A HP R+ I + E + G G+ P + D I +E+ LD++ K Sbjct: 645 AIKGMHPTRTAGIYVNDEYI-GLIGQISPVLTMTDKNFAGKEIYVYELNLDALLPLMAKG 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 K+K + V+RDL+ +VD+ + + + IK N + + V V DV+QG L Sbjct: 704 VKSKPAPKYPA---VQRDLSILVDEDVTNAQVESCIKENAGKYLVSVEVIDVYQGAHLAA 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++ +T D + +D + + +K A +R Sbjct: 761 GKKSLAYRLTFLNEAETLTDVVVTKAIDNVQAALEEKLEANIR 803 >gi|227485249|ref|ZP_03915565.1| possible phenylalanine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] gi|227236709|gb|EEI86724.1| possible phenylalanine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172] Length = 795 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 227/825 (27%), Positives = 390/825 (47%), Gaps = 53/825 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M L W K+++D D L+ I D L+ G VE+V+ + L + VL + +PD D Sbjct: 1 MLVPLIWQKEYIDIDKDLKTITDRLSETGSHVEEVEIHTSGLEGIVVGHVLEQKDHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L ID GK I ++ A N + G G+ + +N M++ GI S GM+ Sbjct: 61 RLRVLTIDVGKDAPITIITNAKNTKEGDYLPVITSGTKL-DNGMVIEDHDFFGIISQGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + EL D ++ L + G S+ L + P+I+ +TPNRSDC+ + Sbjct: 120 TAYSELGYDDSVIPKELREGVIVLAGEFKPGTPASEVLFSNTPVIEYEITPNRSDCLSIM 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + A+ K+ +++ + E I +S C + VK V+ +P Sbjct: 180 GMARETAASFGEKITYPSLAYKDNGEDIKAYANGISIESDSCLRYTARVVKNVKIGKSPQ 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 W++ L G+R I+ +VDITN+V L+ G P H +D +++D + VR A GE I LD Sbjct: 240 WLQNCLMLAGIRPINNIVDITNFVMLETGQPLHAYDLDKLADKKIIVRDAKEGEVIKTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + E L+P +VIA IAGI+GG + D TT++L+E A +D NI + K L Sbjct: 300 DTERKLTPSMLVIADGKEAIGIAGIMGGFDSEITDETTNILLEAASFDADNIRDTSKKLN 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SE 410 + +++ RFE+GV ++ K ++ LI L G IV + S Sbjct: 360 LRSEASSRFEKGVAIEMADVASKRVMKLIEDLKIGEIVGNSYDEGQKETNNPIVKLRISR 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 + L+G+D E+++R LE L F V + D EV P +R D+ +ADL+EE++R+YG+ Sbjct: 420 LNMLTGVDFTKEEAIRNLELLEFEVTDIDEDTLEVKAPYFRNDIGIEADLIEEVVRLYGM 479 Query: 470 DQIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 +I+S+PL + + +R+ L L + +K L + E+ +SFIS + G + Sbjct: 480 GKIESKPLVSSLKKGERSPLRLLKDD---LKAKLVGQKFSELATYSFISPREYDRLGIAK 536 Query: 529 RE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--- 580 + ++NP+ D S MRT+ + +L +N+ D FE+ +E T Sbjct: 537 DSKLRDYISLINPLGEDFSVMRTTQIANMLDVIAKNIKYGQKDMRFFELDRTFEKTTDQL 596 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 P+ + G L+ D S F D+ D +A+ + Sbjct: 597 PKENLTLTMG-------------LYGDYS-----FYDMKDFFTEAMRN----TGFTGFSY 634 Query: 641 ESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ + +H GR I + E + G GE + + + ++ E+ L I + Sbjct: 635 KANENLYAFHAGRCADIYFAGEKI-GVIGEISYEVREEYNINKGAIILEINLSKIA---E 690 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 R KK + ++RD +F+ D+ + + + IIK L+ + +FD++ GK + Sbjct: 691 FRITDKKYKQIPKFPAIERDYSFVADRDLESAFIEEIIKAKAGDLLYKIELFDIYTGKGI 750 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS++ +V + T +++DI+ + I+E +K N VLR Sbjct: 751 ACDQKSLSYRVWYRKADRTLKEEDIKGVEASILEE-LKAKNIVLR 794 >gi|160893028|ref|ZP_02073816.1| hypothetical protein CLOL250_00566 [Clostridium sp. L2-50] gi|156865111|gb|EDO58542.1| hypothetical protein CLOL250_00566 [Clostridium sp. L2-50] Length = 809 Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 237/844 (28%), Positives = 391/844 (46%), Gaps = 92/844 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DV ++ D +T G VE + ++ L + K++ +E++PD Sbjct: 1 MNTPLSWIKVYVPDLDVEAQEFVDAMTLSGSHVEGFEKKDKNLEKIVVGKIVKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLG---------VWAPPGSCIPENNMIVNVRK 108 D + ++D G + +Q+V GAPNV+ G L G +P + + + K Sbjct: 61 DKLVVCQVDIGADELLQIVTGAPNVKEGDLVPTVLDGGKVAGGHDGGELPADGIKIKKGK 120 Query: 109 IRGIESTGMMC------SEKELMLSDDSASIMELPIDAPV--GGRLSDYLELSDPIIDVS 160 +RG+ S GMMC S +EL + P +A V G L L D +++ Sbjct: 121 LRGVPSYGMMCAIEELGSSRELYPEAPENGVYVFPAEADVKPGDDAVKALGLDDVVVEYE 180 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 +T NR DC + G+A + I + E + + ++ D+ LCK + Sbjct: 181 ITSNRVDCFSMIGMAREAAVTFDKPFYPPVIKETGNDEDVNNYVSVEVQDTDLCKRYCAR 240 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVR 279 VK ++ +P WMR+RL + G+RSI+ LVDITNYV + G P H +D S I+ + + VR Sbjct: 241 VVKNLKIGPSPKWMRERLASQGIRSINNLVDITNYVMEEYGQPMHAYDLSTIAGNKIIVR 300 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA G+ + LD QE L D ++I + IAGI+GG+++ D+ +L E A +D Sbjct: 301 RAKDGDTFVTLDGQERKLDKDVLMICDGEKEVGIAGIMGGENSMVTDDIRTLLFEAACFD 360 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNIT 398 NI S + LG+ TD+ ++F +G+D + LI + G + Sbjct: 361 GTNIRLSSRRLGLATDAAFKFTKGLDPNLAEEAINRACQLIEEMGAGEVVGGMVDVYPDP 420 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEK 456 +P+ + F ++ +L G D+ + L I +L + YD+ ++VP++RQD+ Sbjct: 421 VQPKVLPFEPEKINKLLGTDIDEKTMLDIFGKLELT----YDEAAKTLTVPTFRQDLNCM 476 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR-VLASRAMMEVVNWSF 515 ADL EE+ R YG D+I P+ L + E R + R +L + +SF Sbjct: 477 ADLAEEVARFYGYDKI---PMSLPKGEATVGKKPYSHRIYDIARNILEGNGFSGGMCYSF 533 Query: 516 ISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + +L ++ + I NP+ D S MRT L G+L + N +R ++ Sbjct: 534 ESPKVFDKLLLPADSVYRKAITIANPLGEDFSIMRTVSLNGMLTSLATNFNRKNKVARLY 593 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 E +VY + PE + K + G+ G G D F+ K Sbjct: 594 EFGNVYLPKQLPLTELPEER-------MKLTIGMYGEG--------------DFFNLKG- 631 Query: 625 ALSVIEPFVSLDSLRFESGAPS----WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL 680 + E F +L + P+ + HPGR I + V+GY G+ HP D + L Sbjct: 632 --VIEELFDNLGMKNICTYVPTTEHPFLHPGRQANI-VKDDTVVGYLGQLHPETCDNYNL 688 Query: 681 SNPICGFEVYLD--SIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 EVY+ +P + K ++ RDL+ ++D+ I G + +IK Sbjct: 689 KG-----EVYVAVLDMPNVVALSSFDIKYEGIAKFPGSTRDLSMVMDKSIFVGQVEELIK 743 Query: 739 NV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL----MDRIVEN 793 +L++ +FDV++G+ + GKKSVA + TFR D R L +D+I+E Sbjct: 744 KCGGKLLESYKLFDVYEGEQIAAGKKSVAYTM-------TFRAKD-RTLEAGEVDKIIEK 795 Query: 794 VVKK 797 +VK+ Sbjct: 796 LVKE 799 >gi|325283776|ref|YP_004256317.1| Phenylalanyl-tRNA synthetase beta chain [Deinococcus proteolyticus MRP] gi|324315585|gb|ADY26700.1| Phenylalanyl-tRNA synthetase beta chain [Deinococcus proteolyticus MRP] Length = 821 Score = 273 bits (699), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 236/840 (28%), Positives = 383/840 (45%), Gaps = 97/840 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MK SWLK+ + + ++ + IGL +E V++ + I+ +VLS E Sbjct: 1 MKLPYSWLKELIPALPPVTELEPIFSQIGLPLEGVEDVPTVPQGVILAEVLSTEPIEGTK 60 Query: 60 CAILRIDTG-KHQEIQVVCGAPN---VRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + D G +H + + GAPN + G + PG+ + M VR+++G+ES Sbjct: 61 LTKITFDAGPEHGQRTIASGAPNAVGLPAGTMLALVTPGTTL--GGMTYGVRELQGVESW 118 Query: 116 GMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GM SEKEL + + +A +M + +AP G L L +D ++D+ +TPNR+D + G+ Sbjct: 119 GMAASEKELGIGEQNAGVMLIRAGEAPAGTPLHT-LWPADSVLDIEVTPNRADVLSALGL 177 Query: 175 ALDLVA----------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 A DL A AG I+ L + + LE C F V G Sbjct: 178 ARDLAAFLELELREPPAGPAATSPGEITVSLPPKGLVLERDTTGTYRDGCDHFVARTVSG 237 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS----------- 273 ++N +P WM++RL GLR +VD +NYV L+ G P+ ++D + + Sbjct: 238 LQNGPSPLWMQRRLTLSGLRPRDLIVDASNYVMLELGQPTAMYDRAEVQGDQILVSFGLR 297 Query: 274 ------DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ------SIAGIIGGKH 321 D+L E +L LD ++ +S S G+ + IAGI+GG+H Sbjct: 298 QGEEVRDLLGGTHTVGQEDLLILDGRDRGISSVAEAFGSAGKAKEGQGVLGIAGIVGGEH 357 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP--VLKHIVSL 379 TT V++E A +DP+ + R+ LG+ TD+ YRFERGVD ++P +V L Sbjct: 358 GHVTAGTTGVVIEAAHFDPVLLRRTASRLGLKTDAVYRFERGVDP--LLPPRAADRLVGL 415 Query: 380 ILSLCGGTASDICIARNITYK-PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 + G + + + P I +++ L G+ + + IL RLG V GE Sbjct: 416 LAGAGGQPHPGATVVGDPSPSVPGPIETSGDQIRTLLGMHIETAEMRGILSRLGCQVSGE 475 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRY 497 D V PSWR D+ DL EE+ R++G ++ E LP +V S Q R Sbjct: 476 GDALTVQPPSWRVDLHIWQDLAEEVARLHGYAELP-ETLPTLRVHGSNVGASAQSERRDT 534 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLK 554 ++R L+ E V ++F S +++ G + E + + NP +AD + +RT+L P LL+ Sbjct: 535 LRRTLSGLGFQEAVTYTFTSDDEA---GKARTEVPGVRLQNPQTADRTGLRTALYPSLLR 591 Query: 555 ATGRNV--DRAIADFAIFEVSHVYENDTPEGQKYMAAGI--------RKGSSGIEGSGRL 604 A G +RA+ +FE+ ++ P G + G+ + G+ G Sbjct: 592 AAGAYAKGERAL----LFEIGRIF----PAGGETERLGLLMRGDLAAKTYQDGVSG---- 639 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 D S R V F A + A L LR + P+ HPG +G + + + Sbjct: 640 --DFSVFRG-LVQSFAAASGA------SFELRQLRGDE-VPAALHPGIAGEVLWNGQPA- 688 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ G HP I FGL E+ L +P + + RDLA I Sbjct: 689 GWLGALHPEIAQEFGLKGDTFLAELGL-PLPAGEWAFRDPSRAPA------AWRDLAVIA 741 Query: 725 DQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 Q + G + ++K L++ V FDV+QG+ +GEG +SVA+++ + + T D+++ Sbjct: 742 PQDVSYGEIAAVLKREGGELLESVEPFDVYQGEQVGEGNRSVAVRLTYRGAR-TLTDEEV 800 >gi|163756154|ref|ZP_02163269.1| phenylalanyl-tRNA synthetase beta subunit [Kordia algicida OT-1] gi|161323766|gb|EDP95100.1| phenylalanyl-tRNA synthetase beta subunit [Kordia algicida OT-1] Length = 723 Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 212/731 (29%), Positives = 369/731 (50%), Gaps = 55/731 (7%) Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIID 158 N + KIRG S GM+C+E EL L + IM L G S+ ++ +D + + Sbjct: 21 NGFKIKKGKIRGEVSNGMICAEDELGLGESHDGIMVLDETLVPGTPASEVFDIENDTVFE 80 Query: 159 VSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS----ESIPLEIKFDLDDSSLC 214 + LTPNR+D + G+A DL A L K ++ + P +S ++ L+I +++D +L Sbjct: 81 IGLTPNRADAMSHYGVARDLKAGLLQKDVKLELITPSTSSFRVDNRTLKIDVEVEDKNLA 140 Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS- 273 + + GV+ +P W++ RLKA+GL + +VD+TNYV + G P H FDA+ I+ Sbjct: 141 PRYCGVTISGVQVKPSPEWLQHRLKAIGLTPKNNVVDVTNYVLHELGQPLHAFDANYITG 200 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + + V+ +G K LD E +L D+++I + IAG+ GG +G +NTT++ + Sbjct: 201 NKIIVKTLEAGTKFTTLDEVERELHEDDLMICDAEKPLCIAGVFGGIKSGVTENTTNIFL 260 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT----AS 389 E A ++P+++ ++ K G+ TD+ +RFERG+D LK LI L GG A+ Sbjct: 261 ESAYFNPVSVRKTAKRHGLNTDASFRFERGIDPNITEYALKRAALLIQELAGGEITSDAT 320 Query: 390 DICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPS 448 D + ++ R + F N + +L G ++P E IL L + D +++P+ Sbjct: 321 DSYPTKIEDFQVR-VSFEN--ITKLIGEELPRETIKNILSSLEIKINSVTDGGLGLTIPA 377 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKR 500 +R DV+ +AD++EEILR+YG + I Q ++K + S+ + +RY V Sbjct: 378 YRVDVQREADVIEEILRVYGYNNI--------QFDEKWHTSISNT-SRYEDYKLQDVVAN 428 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGR 558 L S+ E++ S + + L + E + +LNP+S D+S MR SLL L+A Sbjct: 429 QLVSQGFYEIMANSLTTATYTELSEQLKTEHNITMLNPLSNDLSVMRQSLLFSGLEAISH 488 Query: 559 NVDRAIADFAIFEVS---HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK-SEERCR 614 N++R +D FE H Y + E K+++ I +G L ++ + + Sbjct: 489 NINRKQSDLKFFEFGKTYHAYSEENREEHKHLSLLI---------TGNLHAETWRQSKPV 539 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 D F AK +V+ + L+SL+ +P G+ + + L FG + Sbjct: 540 ATDFFYAKGIVTAVLSR-LGLNSLK---TSPIKNDLFSEGLTLSLGKTKLVEFGIVKRKV 595 Query: 675 LDFFGLSNPICGFEVYLDS-IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL 733 L F + + + D+ I +++ ++ K K + V+RD A ++D+ + Sbjct: 596 LKAFDIKQEVIFADFNWDNVIEVAKNRKIKFKDI---PKFPKVRRDFALLIDEATTFAEI 652 Query: 734 VNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +I K +R L+ +V++FDV+QG +L +GKKS A+ +Q T D I +M+++ + Sbjct: 653 HSIAKQSERNLLKEVSLFDVYQGDNLPKGKKSYAVSFTLQDEHKTLTDKQIDKIMNKLQK 712 Query: 793 NVVKKTNAVLR 803 + K+ A LR Sbjct: 713 SFEKQLGAELR 723 >gi|313124167|ref|YP_004034426.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280730|gb|ADQ61449.1| Phenylalanyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 803 Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 231/823 (28%), Positives = 390/823 (47%), Gaps = 40/823 (4%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD L+ D V + + LT G+E+ V + LS + +L+ E+ Sbjct: 1 MLVSYNWLKDFLNMDGVDPYALAEKLTRSGVEIASTVHPEDGLSKLVVGHILTCEKIEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G+ + Q+VCGAPNV G + A PG+ +P + + K+RGIES GM+ Sbjct: 61 HLNKTTVDVGEDEARQIVCGAPNVAAGQDVIVALPGAHLP-GGIKIKKGKLRGIESNGMI 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +EL SD D + P D G + L + D ++D +TPNR+D Sbjct: 120 CGLQELGFSDSVVPPKYADGIWVFHDP-DLKPGDSVFAALGMDDYVLDFDITPNRADTSS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-LDDSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + +I L + F + D + + + + GV+ Sbjct: 179 MEGAAYE-VGALIDQKPKIE-DVVLKEDGADWTGDFTAVADEKIAPKYYLRKLTGVKIAE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--LTVRRACSGEKI 287 +P W++ RL G+R I+ +VD TNYV L G P H +DA + VR A GEK+ Sbjct: 237 SPLWLQVRLWNAGIRPINNVVDATNYVMLLTGQPMHAYDAKLFDKTKKIEVRLAKEGEKL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +E DL P ++VI + +AG++GG ++ + TTDV++E A++DP ++ Sbjct: 297 QLLNEKEIDLDPQDIVITDGEQAVGLAGVMGGLNSEVTEETTDVILEAAVFDPALTRKAA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKPRKI 404 TD+ FE+G++ L I +LIL G A +I A ++ + I Sbjct: 357 LRHDNRTDASALFEKGINWDNTQKALD-ICALILRANAGATVLAGEIK-ASDLDKEAVVI 414 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 S ++ G D+ +++ + IL +L F V D++ V+VP+ R D+ +D+ EE+ Sbjct: 415 TTTASRTNKILGTDLSMDEIVEILGKLNFPVAVNGDEYTVTVPNRRWDIFIDSDIFEEVG 474 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 RIYG D IKS P T E + + + R+++++L + + E +N+S S+E + F Sbjct: 475 RIYGYDNIKSTH-PATG-ELIGGYAADEVKVRHLRQLLEGQGLSETINYSLTSEELATTF 532 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +++ P+++ + MR +L+ GLL N R + +FE VY D G Sbjct: 533 VKKALAPVKVNWPLNSARTTMRQNLICGLLDTVAYNFARKQTELQLFENGRVY--DMEGG 590 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + G+ G W K E VD + K V E + + + + + Sbjct: 591 DYHEHEHLAAAYVGLAGESN-WQHKDE----VVDFYYVKGQLEDVFE-MIGVKDVEYRAE 644 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHP--NILDFFGLSNPICGFEVYLDSIPISQKKR 701 A HP R+ I + E + G G+ P + D I +E+ LD++ K Sbjct: 645 AIKGMHPTRTAGIYVNDEYI-GLIGQISPVLTMTDKNFAGKEIYVYELNLDALLPLMAKG 703 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 K+K + V+RDL+ +VD+ + + + IK N + + V V DV+QG L Sbjct: 704 VKSKPAPKYPA---VQRDLSILVDEDVTNAQVESCIKENAGKYLVSVEVIDVYQGAHLAA 760 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++ +T D + +D + + +K A +R Sbjct: 761 GKKSLAYRLTFLNEAETLTDVVVTKAIDNVQAALEEKLEANIR 803 >gi|116514427|ref|YP_813333.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093742|gb|ABJ58895.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325126127|gb|ADY85457.1| Phenylalanyl-tRNA synthetase beta chain [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 803 Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 230/824 (27%), Positives = 390/824 (47%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD L+ D V + + L+ G+E+ V + +S + +L+ E+ Sbjct: 1 MLVSYNWLKDFLNMDGVDPYALAEKLSRSGVEIASTVHPEDGVSKLVVGHILTCEKIEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G+ + Q+VCGAPNV G + A PG+ +P + + K+RGIES GM+ Sbjct: 61 HLNKTTVDVGEDEARQIVCGAPNVAAGQDVIVALPGARLP-GGIKIKKGKLRGIESNGMI 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +EL SD D + P D G + L + D ++D +TPNR+D Sbjct: 120 CGLQELGFSDSVVPPKYADGIWVFHDP-DLKPGDSVFAALGMDDYVLDFDITPNRADTSS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-LDDSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + +I L + F + D + + + + GV+ Sbjct: 179 MEGAAYE-VGALIDQKPKIE-DVVLKEDGADWTGDFTAVADEKIAPKYYLRKLTGVKIAE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--LTVRRACSGEKI 287 +P WM+ RL G+R I+ +VD TNYV L G P H +DA + VR A GEK+ Sbjct: 237 SPLWMQARLWNAGIRPINNVVDATNYVMLLTGQPMHAYDAKLFDKTKKIEVRLAKEGEKL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +E DL P ++VI + +AG++GG ++ + TTDV++E A++DP ++ Sbjct: 297 QLLNEKEIDLDPQDIVITDGEQAVGLAGVMGGLNSEVTEETTDVILEAAVFDPALTRKAA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITYKPRKIV 405 TD+ FE+G++ L I +LIL G S A ++ + I Sbjct: 357 LRHDNRTDASALFEKGINWDNTQKALD-ICALILRANAGATVLSGEIKASDLDKEAVVIT 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S ++ G D+ +++ ++IL +L F V D++ V+VP+ R D+ +D+ EE+ R Sbjct: 416 TTASRTNKILGTDLSMDEIVKILGKLNFPVAVNGDEYTVTVPNRRWDIFIDSDIFEEVGR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF- 524 IYG D IKS P T E + + + R+++++L + + E +N+S S+E + F Sbjct: 476 IYGYDNIKSTH-PATG-ELIGGYAADEVKVRHLRQLLEGQGLSETINYSLTSEELATTFV 533 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 +++ P+++ + MR +L+ GLL N R + +FE VY D G Sbjct: 534 KKALAPVKVNWPLNSARTTMRQNLICGLLDTVAYNFARKQTELQLFENGRVY--DMEGGD 591 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + G+ G W K E VD + K V E + + + + + A Sbjct: 592 YHEHEHLAAAYVGLAGESN-WQHKDE----VVDFYYVKGQLEDVFE-MIGVKDVEYRAEA 645 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL----DFFGLSNPICGFEVYLDSIPISQKK 700 HP R+ I + E + G G+ P + +F G I +E+ LD++ K Sbjct: 646 IKGMHPTRTAGIYVNDEYI-GLIGQIAPVLAMTDKNFAG--KEIYVYELNLDALLPLMAK 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 K+K + V+RDL+ +VD+ + + + IK N + + V V DV+QG L Sbjct: 703 GVKSKPAPKYPA---VQRDLSILVDEDVTNAQVESCIKENAGKYLVSVEVIDVYQGAHLA 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++ +T D + D + + +K A +R Sbjct: 760 AGKKSLAYRLTFLNEAETLTDAVVTKATDNVQAALEEKLEANIR 803 >gi|300933429|ref|ZP_07148685.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium resistens DSM 45100] Length = 853 Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 236/876 (26%), Positives = 408/876 (46%), Gaps = 95/876 (10%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + SWL L T V+ E+ +G E E + E P +V +E Sbjct: 1 MLISQSWLTRILGTSNPGWSVTSEEFDAGFVRVGFETEGYEAIPETTGPLVFGRVEKIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D E+Q ++CGA N G + V A PG+ +P N ++ RK Sbjct: 61 LEGFKKPIRYCDVNVGDANGTGELQHIICGARNFGEGDIVVVALPGTVLP-GNFEISARK 119 Query: 109 IRGIESTGMMCSEKELMLSD-DSASIMEL------PIDAPVGGRLSDYLELSDPIIDVSL 161 G S GM+CS E+ L+ + IM + A +G ++L L D + +V++ Sbjct: 120 TYGKVSEGMICSAMEVGLAQVQNPGIMTVSEKEMQAHGAGLGDDAREFLGLEDTVFEVNI 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEI----------KFDLDDS 211 TP+R + RG+A +L ++ + ++ ++ + L + +D+ Sbjct: 180 TPDRGYALSARGLARELSSSFDLQFRDPAKDPAAAALADDLFAGLPGTQGEVHELHVDED 239 Query: 212 SLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDAS 270 + C FA+ V GV N +P W+++ L G R ++ D+TNYV G P H FDA+ Sbjct: 240 TKCTKFALRKVTGVDPNAESPMWLQRELMLCGQRPVNVPTDVTNYVMFLLGQPMHAFDAN 299 Query: 271 RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 ++ L VRRA +GEK+ LD+ E L ++VVI + IQS+AG++GG + D TTD Sbjct: 300 QVKGALHVRRAKAGEKLTTLDDVERKLDAEDVVICDESGIQSLAGVMGGSTSEISDTTTD 359 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD 390 VL E A WD I +AR+ + + T++ RFERG D + L V+L+ + GG + Sbjct: 360 VLFEAAHWDQITVARTCRRHKLSTEASRRFERGTDPAVIEEALDMAVALLRKIAGGEVVE 419 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD-----KFE 443 + IV S +++G P ++ L +G +V GE D + Sbjct: 420 GITRVGDVPAMKPIVMHTSRPGKVAGKVYPDGTTISRLREVGCAVEETGELDANGAREIT 479 Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 V+ P+WR D+ ADLVEE+LR+ G++ I P + R L+ +Q R V R +A Sbjct: 480 VTPPTWRPDLTMAADLVEEVLRLEGLEDI---PSIVPTSPSGRGLTPRQRMRRNVGRAMA 536 Query: 504 SRAMMEVVNWSFISKEQSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 E++ FI+ + ++ +R +++ NP+ +D + + T+LLP ++++ R Sbjct: 537 WSGYAEILPTPFIANDVFDVWELEENDPRRRTVKVQNPLESDYAQLGTTLLPSMIESLRR 596 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR-FVD 617 NV R D A++ V + R+GS+GI + + S+E R +D Sbjct: 597 NVTRGQRDVALYGVEQTSQE-------------REGSNGISPMPAVTARPSDEEIRQLLD 643 Query: 618 LFDAKADALSVIE--------------PFVSLDSLR--------------FESGAPSWYH 649 + +++I PF + D++ F + +H Sbjct: 644 SIPQQDLHVAMIATGNRQLQGTWGQALPFEATDAVEAARIVGRAAGVEFTFRNAEYLPWH 703 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 PGR + E+V G+ GE HP + + L E+ LD++P+ +K Sbjct: 704 PGRCAEVLVDGEVV-GHAGELHPQVCERAELPPRTIAMEINLDALPLEEKFPRPL----- 757 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 LSS V +D+A +VD ++P+ + +++ L++++ +FDV+ ++LG+GK+S+ Sbjct: 758 LSSYPAVLQDVAVVVDANVPSTDVEAALRDGAGELLEEIRLFDVYTSEALGDGKRSLTFS 817 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +++ + VE K+ A LR Sbjct: 818 LRFRAADRTLTEEEASKSREAAVEEATKRVGAELRQ 853 >gi|160881598|ref|YP_001560566.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium phytofermentans ISDg] gi|160430264|gb|ABX43827.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium phytofermentans ISDg] Length = 812 Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 241/844 (28%), Positives = 387/844 (45%), Gaps = 91/844 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ + DV+ + D +T G +VE + +A L + K+L +ER+PD Sbjct: 1 MNTPLSWIKAYVPELDVTAQDYTDAMTLTGTKVEGFERLDADLEKIIVGKILKIERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVN 105 D C + + G + +Q+V GA NV+ G L G GS P + + Sbjct: 61 DKLIVCQVQTTEEG--ESVQIVTGAKNVKEGDVIPVVLDGGRVAGGHDGSKTP-GGIKIK 117 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----------------VGGRLSD 148 K+RGIES GMMCS +EL S E+ +AP +G + Sbjct: 118 KGKLRGIESNGMMCSIEEL------GSSKEMYPEAPEEGIYIFSDMKEYDNIKIGSSAIE 171 Query: 149 YLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDL 208 L L+D + +T NR DC GV GIA + A + + + E + ++ + Sbjct: 172 ALGLNDITFEYEITSNRVDCFGVIGIAREAAATFRKEFVPPVVKETGNDEKVAEYVEVKI 231 Query: 209 DDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 D+ LC + VK V+ +P WM++RL A G+R I+ +VDITNYV + P H FD Sbjct: 232 KDTDLCSRYVARVVKNVKIGPSPLWMQRRLSASGIRPINNIVDITNYVMEEFAQPMHAFD 291 Query: 269 ASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 I+ + + V RA GE+ + LD Q L ++I + +IAGI+GG+++ D+ Sbjct: 292 LDLIAGNKIIVERAKDGEEFVTLDGQVRKLDSSMLMICDAEKPVAIAGIMGGENSMITDD 351 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 +L E A +D NI S K LG+ TD+ +FE+G+D + + LI L G Sbjct: 352 VKILLFEAACFDGTNIRLSSKKLGLRTDASSKFEKGLDPNTAMAAINRACQLIEELGVGE 411 Query: 388 ASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILER--LGFSVIGEYDKFEV 444 + + K V N ++ G + E L + LGF + EV Sbjct: 412 VVGGAVDVYPRVRGEKRVKFNWQRTNKVLGTSLDKETMLSYFKMVDLGFDPATD----EV 467 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 VPSWRQDVE +ADL EE+ R +G D I P L E + R R +A Sbjct: 468 IVPSWRQDVECQADLDEEVARFFGYDNI---PTTLPTGEATTGKISFKLRIEDEARAMAE 524 Query: 505 R-AMMEVVNWSFISKE--QSVLFGGGQRELE---ILNPISADMSNMRTSLLPGLLKATGR 558 + E +SF S + +L G + E I NP+ D S MRTS L G+L + Sbjct: 525 QFGFSEAQTYSFESPKVFDKLLLPAGDKLRETVTISNPLGEDYSVMRTSPLNGMLGSLST 584 Query: 559 NVDRAIADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 N +R + ++E++++Y + P+ + G G+G Sbjct: 585 NFNRRNKNVRLYELANIYLPKALPVTELPDERMQFTLGFY-------GAG---------- 627 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFE-SGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 D FD K IE L ++ + ++ HPGR I ++ GY GE + Sbjct: 628 ----DFFDLKGVVEEFIEKVGMKGILTYDPNSGKTFLHPGRQANIYYEGTLI-GYLGEVY 682 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P +LD + + + LD +P + + K ++ V RD++ ++ + I AG Sbjct: 683 PEVLDNYDIGEK--AYVAVLD-MPEIVARASYDIKYTGIAKYPAVSRDISMVMKKEILAG 739 Query: 732 TLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + +I KN +L++ +FD+++G + EG KS+A + + L T D D+ +M++I Sbjct: 740 QVEEVIRKNGGKLLEHYNLFDIYEGAQIKEGHKSMAYSISFRALDRTLEDKDVTEVMNKI 799 Query: 791 VENV 794 ++ + Sbjct: 800 LKGL 803 >gi|325479675|gb|EGC82767.1| phenylalanine--tRNA ligase, beta subunit [Anaerococcus prevotii ACS-065-V-Col13] Length = 795 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 228/824 (27%), Positives = 393/824 (47%), Gaps = 57/824 (6%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD-CAI 62 L W +D+L D L+ I D L+ G VE+V + L + V+S E++PD D + Sbjct: 5 LIWQEDYLKLDNDLKNITDRLSETGSHVEEVTIHTSKLDGVVVGHVISQEKHPDADRLQV 64 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 L+ID G+++ I ++ A N + G + G+ + + +I + GI S GM+ S Sbjct: 65 LKIDVGENEPITIITNAKNTKAGDDLLVITSGTKLDDGTVIED-HDFFGIVSQGMLTSYS 123 Query: 123 ELMLSDDSA-------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 EL DDS ++ L + G S+ L + P+I+ +TPNR DC+ + G+A Sbjct: 124 ELGY-DDSVIPKEFRDGVIVLEGEYKPGTNASEVLYSNTPVIEYEITPNRPDCLSIIGMA 182 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + A+ ++ ++ +SE I K +S C F K V +P W++ Sbjct: 183 RESAASFSDRITYPDLEFDTNSEDIKDYSKGVAIESKNCNRFVARVAKNVTIGKSPQWLQ 242 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQE 294 L G+R I+ +VDITN+V L+ G P H +D ++ D + VR A GE + LD + Sbjct: 243 NYLMLAGMRPINNIVDITNFVMLETGQPLHAYDLDKLCDKKIIVRDAKEGEVLKTLDGVD 302 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L +VIA +AGI+GG+ + T ++L+E A +D NI +S K LG+ + Sbjct: 303 RKLDSSMLVIADGKEAIGLAGIMGGEDSEVTHETKNILLEAANFDASNIRKSSKTLGLRS 362 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN-SEVKR 413 ++ RFE+G+ ++ K + LI L G + + K V + + Sbjct: 363 EASSRFEKGLPIEMADFASKRAMKLIADLGIGEVVGGLFDEGESLREEKTVDLRLKRLNM 422 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 L+G+D ++ ++ LE L F V D+ VP +R D+E +ADL+EE++R++G+ I Sbjct: 423 LTGVDFTLDQAIENLELLEFEVEKIDDETLRAKVPFFRSDIEMEADLIEEVVRLFGMGNI 482 Query: 473 KSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ----SVLFGG 526 +++PL L + E + L+ +K L + E+ +SFIS + V G Sbjct: 483 ENKPLVSSLKRGERSKKRLLRDD----LKHRLVGQKFSELATYSFISPREYDRLKVEEGS 538 Query: 527 GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---DTPE 582 R+ ++++NP+ D S MRT+ +P +L G+N+ D FE+ +E P Sbjct: 539 KLRDYIKLINPLGEDYSVMRTTQIPSMLDVIGKNIKYGQKDMRFFELDRTFEKTDGKLPR 598 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 + G L+ D S F DL D +A+ V F++ Sbjct: 599 ENMTLTMG-------------LFGDYS-----FYDLKDFFTEAMRG----VGFTGFTFKA 636 Query: 643 GAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + +H GR I E + G GE D + + E+ L I + KR Sbjct: 637 NENVYAFHAGRCADIYLDDEKI-GIMGEISYETRDEYEIEKGCLILEINLAKI---EDKR 692 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 +K + ++RD +F+ ++++ + + II+ N L+ D+ +FD++ G+ + + Sbjct: 693 VIDRKYKAIGKYPAIERDYSFVTERNLESDIIEAIIRDNGSGLVGDIKLFDIYTGEHIED 752 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KKSV+ +VL + T +D D+ + +I+E + KK + VLRS Sbjct: 753 DKKSVSYKVLYRSNDRTLKDKDVSGIEKKILEELEKK-DIVLRS 795 >gi|163815797|ref|ZP_02207168.1| hypothetical protein COPEUT_01977 [Coprococcus eutactus ATCC 27759] gi|158448938|gb|EDP25933.1| hypothetical protein COPEUT_01977 [Coprococcus eutactus ATCC 27759] Length = 809 Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 232/835 (27%), Positives = 393/835 (47%), Gaps = 78/835 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +SW+K ++ D DV+ ++ D +T G VE + ++ L + K+L++E++PD Sbjct: 1 MNTPISWIKAYVPDLDVTAQEFVDAMTLSGSHVEGYEQKDKNLDKIVVGKILTMEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP----ENN-----MIVNVRK 108 D + ++D G+ + +Q+V GA NV+V L G + +NN + + K Sbjct: 61 DKLVVCQVDVGQAEPLQIVTGAKNVKVDDLIPLVLDGGKVAAAHGDNNEYPDGIKIKKGK 120 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPV--GGRLSDYLELSDPIIDVS 160 +RG+ES GMMC +EL S D + P ++ V G L L D +++ Sbjct: 121 LRGVESNGMMCGIEELGSSRDFYPEAPEDGVYVFPEESGVKPGDDAVKALGLDDVVVEYE 180 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 +T NR DC + G+A + A ++ + E + I ++ D LC + Sbjct: 181 ITSNRVDCFSMIGMAREAAATFDKPFYPPVVTKTGNDEDVNDYISVEVKDHDLCPRYTAR 240 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVR 279 VK ++ +P WM+QRL + G+RSI+ LVDITNYV + G P H +D S I+ + + VR Sbjct: 241 VVKNLKIGPSPKWMQQRLASQGIRSINNLVDITNYVMEEYGQPMHAYDLSTIAGNKIVVR 300 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA G+ + LD QE L D ++I + IAGI+GG+++ D+ +L E A +D Sbjct: 301 RANDGDTFVTLDGQERKLDHDVLMICDGEKEIGIAGIMGGENSMVTDSIDTLLFEAACFD 360 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 NI S + +G+ TD+ +F +G+D + + LI + G + A ++ Sbjct: 361 GTNIRLSSRRIGLATDAAAKFTKGLDPNLAMEAIDRACQLIEEMGAGEV--VGGAVDVYP 418 Query: 400 KP---RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 P +K+ F ++ L G +V E L RLG + E + + VPS+RQD+ Sbjct: 419 NPVQDKKLPFEPDKMNALLGTEVEPEKMLYYFGRLGLTYDAETNTLD--VPSFRQDLNCM 476 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 ADL EE+ R YG D I P+ L + E L Q + VL + + +SF Sbjct: 477 ADLAEEVARFYGYDNI---PVSLPRGEATVGKLPYDQMINAIARDVLEANGFSGGMCYSF 533 Query: 516 ISKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 S + +L ++ + I NP+ D S MRT L G+L + N +R ++ Sbjct: 534 ESPKVFDKLLLPADSEFRKTVTIANPLGEDFSIMRTVSLNGVLTSLATNYNRKNKIARLY 593 Query: 571 EVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 E +VY + PE + K + G+ G G D FD K Sbjct: 594 EFGNVYLPKSLPLTELPEER-------MKLTIGMYGQG--------------DFFDLKGV 632 Query: 625 ALSVIEPFVSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + + + +E + ++ HPGR +K ++ +G+ G+ HP + D + L Sbjct: 633 LEELTDKVGLKGQVTYEPESEYTFLHPGRQAKLK-KGKLTIGFIGQVHPEVCDNYNLKGE 691 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DR 742 + + + ++ + TK + + RDL+ +V++ I G + +IK + Sbjct: 692 VYVAVIDMPTLVMLSNFDTKYEGIAKFPG---STRDLSLVVNKEIFVGQIEEVIKKCGGK 748 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L++ +FDV++G+ + +GKKSVA + TFR D R L V+ ++ K Sbjct: 749 LLESYKLFDVYEGEQIAKGKKSVAYTM-------TFRAKD-RTLETSEVDGIIAK 795 >gi|104774332|ref|YP_619312.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423413|emb|CAI98286.1| Phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 803 Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 229/824 (27%), Positives = 391/824 (47%), Gaps = 42/824 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD L+ D V + + L+ G+E+ V + +S + +L+ E+ Sbjct: 1 MLVSYNWLKDFLNMDGVDPYALAEKLSRSGVEIASTVHPEDGVSKLVVGHILTCEKIEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +D G+ + Q+VCGAPNV G + A PG+ +P + + K+RGIES GM+ Sbjct: 61 HLNKTTVDVGEDEARQIVCGAPNVAAGQDVIVALPGARLP-GGIKIKKGKLRGIESNGMI 119 Query: 119 CSEKELMLSD--------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +EL SD D + P D G + L + D ++D +TPNR+D Sbjct: 120 CGLQELGFSDSVVPPKYADGIWVFHDP-DLKPGDSVFAALGMDDYVLDFDITPNRADTSS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-LDDSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + +I L + F + D + + + + GV+ Sbjct: 179 MEGAAYE-VGALIDQKPKIE-DVVLKEDGADWTGDFTAVADEKIAPKYYLRKLTGVKIAE 236 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--LTVRRACSGEKI 287 +P WM+ RL G+R I+ +VD TNYV L G P H +DA + + VR A GEK+ Sbjct: 237 SPLWMQARLWNAGIRPINNVVDATNYVMLLTGQPMHAYDAKLFDNTKKIEVRLAKEGEKL 296 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+ +E +L P ++VI + +AG++GG ++ + TTDV++E A++DP ++ Sbjct: 297 QLLNEKEINLDPQDIVITDGEQAVGLAGVMGGLNSEVTEETTDVILEAAVFDPALTRKAA 356 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITYKPRKIV 405 TD+ FE+G++ L I +LIL G S A ++ + I Sbjct: 357 LRHDNRTDASALFEKGINWDNTQKALD-ICALILRANAGATVLSGEIKASDLDKEAVVIT 415 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 S ++ G D+ +++ ++IL +L F V D++ V+VP+ R D+ +D+ EE+ R Sbjct: 416 TTASRTNKILGTDLSMDEIVKILGKLNFPVAVNGDEYTVTVPNRRWDIFIDSDIFEEVGR 475 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF- 524 IYG D IKS P T E + + + R+++++L + + E +N+S S+E + F Sbjct: 476 IYGYDNIKSTH-PATG-ELIGGYAADEVKARHLRQLLEGQGLSETINYSLTSEELATTFV 533 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 +++ P+++ + MR +L+ GLL N R + +FE VY D G Sbjct: 534 KKALAPVKVNWPLNSARTTMRQNLICGLLDTVAYNFARKQTELQLFENGRVY--DMEGGD 591 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + G+ G W K E VD + K V E + + + + + A Sbjct: 592 YHEHEHLAAAYVGLAGESN-WQHKDE----VVDFYYVKGQLEDVFE-MIGVKDVEYRAEA 645 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL----DFFGLSNPICGFEVYLDSIPISQKK 700 HP R+ I + E + G G+ P + +F G I +E+ LD++ K Sbjct: 646 IKGMHPTRTAGIYVNDEYI-GLIGQIAPVLAMTDKNFAG--KEIYVYELNLDALLPLMAK 702 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 K+K + V+RDL+ +VD+ + + + IK N + + V V DV+QG L Sbjct: 703 GVKSKPAPKYPA---VQRDLSILVDEDVTNAQVESCIKENAGKYLVSVEVIDVYQGAHLA 759 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 GKKS+A ++ +T D + D + + +K A +R Sbjct: 760 AGKKSLAYRLTFLNEAETLTDAVVTKATDNVQAALEEKLEANIR 803 >gi|256751288|ref|ZP_05492168.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter ethanolicus CCSD1] gi|256749843|gb|EEU62867.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoanaerobacter ethanolicus CCSD1] Length = 602 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 192/619 (31%), Positives = 317/619 (51%), Gaps = 36/619 (5%) Query: 196 SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNY 255 S E P ++ + D LC + VK V+ +P WM+ RL G+R I+ +VD+TNY Sbjct: 9 SEEQNPAKVTIEATD--LCFRYVARVVKNVKIGPSPMWMQMRLLKAGIRPINNVVDVTNY 66 Query: 256 VSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIA 314 V L+ G P H FD ++ + + VRRA GEK++ LD +E L +VIA + +A Sbjct: 67 VMLELGQPLHAFDLDKVENKHIIVRRAREGEKLVTLDGKERILDSSMLVIADEKEAIGLA 126 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 G++GG++ D T ++L+E A + NI + K LG+ +++ RFE+G+D + + + Sbjct: 127 GVMGGENTEITDTTVNILIESANFKGSNIRHTSKKLGLRSEASSRFEKGLDPEITVLACE 186 Query: 375 HIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGF 433 L+ CGGT + + ++ +N + R G ++P + ILE L F Sbjct: 187 RAAQLMEKYCGGTVLKGLVDEYPKPIEKTVLTVNPHRINRFLGTELPTSQMIEILESLEF 246 Query: 434 SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 V+ + D E++VP +R+DV +AD+ EEI R++G + I+ + Q L+ +Q Sbjct: 247 KVLQKGDDLEITVPHFRRDVTIEADIAEEIARLFGYNNIEDSLMKNAQT-TLGALTKEQR 305 Query: 494 RTRYVKRVLASRAMMEVVNWSF-----ISKEQSVLFGGGQRELEILNPISADMSNMRTSL 548 + VL + + E+V SF + K L ++ ++I+NP+ D S MRT+L Sbjct: 306 LEEKAREVLLACGLNEIVTMSFMGHKDLDKINVPLDSPFRKAVKIINPLGEDQSLMRTTL 365 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSD 607 LP +L T N R + DF +FE+S ++ + P K + I+ + G+ G Sbjct: 366 LPFILNVTYTNYSRKVQDFKVFEISKIFMPKELP--LKELPQEIKTIAIGMYGKD----- 418 Query: 608 KSEERCRFVDLFDAKA--DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 VD + K +AL + ++ +R E PS YHPGRS I E LG Sbjct: 419 --------VDFYSLKGVIEALFEVMGIKGVEYVRAED--PS-YHPGRSAKILLGDE-TLG 466 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 FGE HP++L+ + + + E+ LD + + KK + L V+RD+A +VD Sbjct: 467 IFGEIHPDVLENYDIPVRVYAGEINLDKV---IQYANVEKKYMPLPKYPAVERDIAVLVD 523 Query: 726 QHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 I + +I + +LID V +FDV++G ++ EGKKSVA + + T D+++ Sbjct: 524 GDIFVKAVEKVILETGGKLIDKVELFDVYKGPNIPEGKKSVAFSIWYRSYGRTLTDEEVN 583 Query: 785 ILMDRIVENVVKKTNAVLR 803 ++ + IVE + KK A LR Sbjct: 584 VIHNNIVEALDKKLGAKLR 602 >gi|301384179|ref|ZP_07232597.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato Max13] Length = 476 Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 173/481 (35%), Positives = 269/481 (55%), Gaps = 16/481 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V + +V +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFTGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD- 177 CS EL + + +MEL DAPVG + YL L D I+V LTPNR DC+ V G+A + Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGQDIRVYLGLDDASIEVDLTPNRGDCLSVAGLAREV 178 Query: 178 --LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVAPNWM 234 L AA + + +I + E P+E+ + C + ++ V + P WM Sbjct: 179 GALYAADVTR-PQIAAVSAVHDEVRPVEVLA----PAACPRYLGRVIRNVDLSRPTPLWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD QE Sbjct: 234 VERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLDGQE 293 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ G+ T Sbjct: 294 VSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSYGLHT 353 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVK 412 D+ +R+ERGVD Q ++ L+L + GG A + + + P + S V+ Sbjct: 354 DASHRYERGVDWQLAREAMERATGLLLDITGGEAGPVIEVVSEQHLPSIAPVTLRASRVE 413 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 414 QMLGLVIENAEIERLLTGLGLTVSAEADGQWRVDVPSHRFDISLEVDLIEELARLYGYNR 473 Query: 472 I 472 + Sbjct: 474 L 474 >gi|310827802|ref|YP_003960159.1| phenylalanyl-tRNA synthetase [Eubacterium limosum KIST612] gi|308739536|gb|ADO37196.1| phenylalanyl-tRNA synthetase [Eubacterium limosum KIST612] Length = 794 Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 225/831 (27%), Positives = 397/831 (47%), Gaps = 66/831 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M +L+WLK+++ + + D LT G +VE +D + +S K++ +E++PD D Sbjct: 1 MLVSLNWLKEYVKIEQDPKTFGDILTMSGTKVETIDPISDEVSGVITGKIVKIEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP---ENNMIVNVRKI-----R 110 + +ID + +V A NV G+ +P EN+++ K+ R Sbjct: 61 KLVVCQIDVAAASPLTIVTSATNVF---------EGAVVPVAVENSVVAGGHKMSRTDFR 111 Query: 111 GIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPN 164 GI S GMMCS +EL ++ D I LP + +G + D L + D II+V LT N Sbjct: 112 GIMSYGMMCSVEELGMNTDLFTPEIKNGIYILPENTELGVEVRDLLWIDDSIIEVELTAN 171 Query: 165 RSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 R DC + GIA + AA + + + +++ + ++ LC + K Sbjct: 172 RGDCQSIYGIAREAAAALDEAVAPVKLYDKKETQNQIADYLSVKVETELCPRYVAKMFKV 231 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACS 283 + +P WM+ +L G+R I+ +VD+TNYV L+ G P H FD + SD + V+ Sbjct: 232 KKIEPSPLWMQLKLLNSGVRPINNIVDVTNYVMLELGQPLHAFDYKSLNSDEIVVKTGNK 291 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + ++ LD++E D+ ++I + ++AGI+GG ++ +NT V++E A +D +I Sbjct: 292 EKTVVTLDDKERDIDESMMMITNGKYPVAVAGIMGGANSEITENTEYVVLESACFDKTSI 351 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY---- 399 + K LG+ T++ R+E+G+ G+ + + L G A D+ Y Sbjct: 352 RLTSKKLGMRTEASGRYEKGI-YPGLAETAALRATYLFDLIG--ACDVLEGIIDVYLKPE 408 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKAD 458 +P ++ + R GID+ ++ +RI ERL +V + V VP +RQD+E + D Sbjct: 409 EPHEVAVNVDWINRFIGIDLSEDEIIRIFERLFLTVENKGKGNLVVKVPDYRQDLEIRED 468 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF--I 516 L EE+ RIYG ++I S + T + + +++Q ++ +L + + SF + Sbjct: 469 LAEEVARIYGYNRIPSTIMGGTTLVGGK--TVKQKYQDMLQSLLVGAGYYQTLTTSFTSV 526 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 ++ ++ G + ++NP+ + S MR +L+ L+ N +R FE + Y Sbjct: 527 NRINALNMDCGDDLVPLINPLGEENSIMRNTLVGHQLEVVSLNHNRKNPQGRFFEFAQTY 586 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV--- 633 + +G+ I + I G D FD K V+E + Sbjct: 587 HKNPNKGE----LPIERKHLVISSYGN------------TDYFDIKG----VVELLLDRS 626 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + F P YHPGR I+ + ++G GE HP ++ + L E+ D Sbjct: 627 GIADYDFVLAGPDLYHPGRKAEIRV-GDTLVGQIGEIHPVVVKNYDLPKRTYACELDFDV 685 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDV 752 + Q+ K V + RD+A ++D+ +PA + IK+ D ++++V +FDV Sbjct: 686 MAGLQQDAI---KFVEMPKYPGSSRDIALVLDEDVPASKIEATIKSHDTGIMENVELFDV 742 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +QG+ + +GKKS+A +L + + T DDDI +MD I+ ++ NA LR Sbjct: 743 YQGEQIEKGKKSLAYSILFRHPERTLTDDDINPVMDEILSDLKNGFNAQLR 793 >gi|91214567|ref|ZP_01251540.1| phenylalanyl-tRNA synthetase beta subunit [Psychroflexus torquis ATCC 700755] gi|91186994|gb|EAS73364.1| phenylalanyl-tRNA synthetase beta subunit [Psychroflexus torquis ATCC 700755] Length = 808 Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 234/838 (27%), Positives = 399/838 (47%), Gaps = 65/838 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSPFTIVKVLSVERNP 56 MK + +WLK ++T S E+ LT +GLEVE ++ E+ L + +V S E +P Sbjct: 1 MKISFNWLKQFINTKWSAEETEVLLTDLGLEVEGIEAFESIKGRLEGILVGRVESCESHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGI 112 + D + +++ G + +VCGAPNV G L A G+ + ++ + KIRG Sbjct: 61 NADRLKLTKVNIGTDTLLTIVCGAPNVAEGQLVPVATIGTTLYDDKGQPWTIKKGKIRGE 120 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGV 171 S GM+C+E E+ L IM L G L++ + +D + ++ LTPNR+D + Sbjct: 121 VSEGMICAEDEIGLGGSHDGIMVLEDALIPGTPLNEVFPVETDEVFEIGLTPNRADAMSH 180 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE-----IKFDLDDSSLCKGFAMCCVKGVR 226 G+A DL A + + I P S S +E + ++ L + V G+ Sbjct: 181 WGVARDLRAGLIQNEINLPIDTP-SVSSFHVENRSNRVSIEVKKPKLAPRYCGVTVSGIE 239 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGE 285 +P+W++ +LKA+G+ + +VD TNYV + G P H FD +I D + V+ SG Sbjct: 240 VKESPDWLKNKLKAIGINPKNTIVDATNYVMHELGQPLHAFDLDKIKDRKIQVKTLKSGT 299 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K LD E +L D+++I + IAG+ GG +G NT+ + +E A ++ ++I + Sbjct: 300 KFTTLDGIERELHEDDLMICDSQKPLCIAGVFGGLESGVTKNTSSIFLESAYFNAVSIRK 359 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKI 404 + K G+ TD+ +R+ERG+D LK V LI + GG SD+ + P+KI Sbjct: 360 TAKRHGLNTDASFRYERGIDPNITEFALKRAVLLIQEISGGHVTSDVD-----DFYPKKI 414 Query: 405 ----VFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKAD 458 VF+ ++ L G ++ IL L V + +++P++R DV + D Sbjct: 415 EDFQVFLTFDKINHLIGQEIDSGVIKTILTSLDIKVNNVSESGLGLTIPAYRVDVRREVD 474 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-------LASRAMMEVV 511 ++EEILR+YG + I+S+ K N+S+ S +V L S+ E + Sbjct: 475 VIEEILRVYGYNNIESDS--------KFNVSVANSSPYDDYKVQNKIADQLVSQGFYETM 526 Query: 512 NWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 S +K L + E + ILN +S+D+ MR S+L L++ N++R D Sbjct: 527 ANSLTTKSYVDLIDDLKEEHNVNILNALSSDLGVMRQSMLCSGLESLSYNINRKSTDLKF 586 Query: 570 FEVSHVYE--NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 FE Y N + K+++ + +G + S + W + +E F F+ K S Sbjct: 587 FEFGKTYHKFNSDYKELKHLSLFL----TGFK-SSKTWI-RPQETTSF---FELKGILAS 637 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + E + + L F++ S + G G IK + FG P+IL F + + Sbjct: 638 IFEK-LGITDLSFQTVESSLFSEGLMGKIKAQTIV---EFGRVTPHILKSFDIDQEVLYA 693 Query: 688 EVYLDSI-PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLID 745 +V+ D++ + Q + K K + S +RD A ++D+ + L + K ++ Sbjct: 694 DVHWDAVLEVIQNHQLKIKDIPKYPS---TQRDFALLLDKSVKFDDLKTSAFKTDKTILK 750 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +V +FDV++G L E KKS A++ + T D + +M ++ + A LR Sbjct: 751 EVDLFDVYEGDKLPEEKKSYALRFKFIDEEKTLTDKQVDKVMTKLQNRFETEFGASLR 808 >gi|88808526|ref|ZP_01124036.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] gi|88787514|gb|EAR18671.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. WH 7805] Length = 818 Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 235/851 (27%), Positives = 410/851 (48%), Gaps = 80/851 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +LSWLKD + + ++ D L+ G EVE++++ + +V VL ++P+ D Sbjct: 1 MRVSLSWLKDLVQVNEPALELGDRLSMAGFEVEELEDLSLFAQGVVVGHVLEKNKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +Q+VCGA NVR G+ A G+ +P N+ + ++RG+ S GM+ Sbjct: 61 KLSVCSVDVGAESPLQIVCGASNVRAGIHVPVAMVGAILPAVNLTIKAGELRGVSSQGMI 120 Query: 119 CSEKELMLSDDS---ASIMELPIDAPV-GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL + D A + EL + P G ++ L L D ++++++T NR D + + GI Sbjct: 121 CSLAELGQTSDVDGIAILEELVPEVPAPGASIAPVLGLDDTVLELAITANRPDGLSMTGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG-FAMCCVKGVR-NNVAPN 232 A ++ A L S P + ++ L ++ G +A+ VK + ++ +P Sbjct: 181 AREVAALTGAALSLPETSAPTTVDA--LNPSPPSAEAMQTGGIYAVTEVKQLDGSSCSPQ 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRACS 283 W++QRL+ G++ ++A+VDI N V L++G P H FDA + + +R+A Sbjct: 239 WIQQRLQRAGVKPVNAVVDIGNLVMLEQGQPLHAFDADALESICGQPITASDFGLRQARE 298 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 E LD ++ L V+ R +IAG++G + +G D T + +E AL+ P ++ Sbjct: 299 KEAFRGLDGRDLSLDSRVQVVTCCDRAVAIAGVMGSEESGVTDQTRRIWLESALFTPSSV 358 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-------------GTASD 390 S + G TDS R+E+GV + + +SL+ SL G G A Sbjct: 359 RISSRTTGQRTDSSSRYEKGVPREITLLAAGRALSLLESLLGAEIGRTWQCASEPGPAPV 418 Query: 391 ICIARNITYK---PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV- 446 + + R+ ++ P +S + LS V + L+ LG S+ D ++V V Sbjct: 419 VGLRRSALHQLLGPLAPTDPDSAAQDLSDGQVEV-----CLKSLGCSLTSTEDGWDVVVP 473 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 PS R D+ + DL+EE+ R+ G D+ +S P PL+ LSL Q R +++ L S Sbjct: 474 PSRRLDLLREVDLIEEVARLVGFDRFESHLPDPLS----PGRLSLGQQAERRLRQRLCSF 529 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + EV S + + + + I NP+ A+ S++RT+L L+ RN+ + Sbjct: 530 GLQEVTTLSLTRADDT-----DEARIAISNPLLAETSHLRTALWQEHLEICQRNLQSSQP 584 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ +V+ D A+G+R+ S RL ER L K Sbjct: 585 GCWLFEIGNVFFPD--------ASGVRQTS-------RLGGVICGERRLSRWLNSGKPSP 629 Query: 626 LSVIEPFVSLDSLRFESGAPSW---------YHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 LS E L SL G S HPGR+ + + LG FG+ HP++ + Sbjct: 630 LSYYEARGLLTSLFASLGLESMDRRLVDDDRLHPGRAATVVVEGK-PLGCFGQLHPSLCE 688 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTK--TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 F L + F+ + ++ +S R+ T + S+L +RDLA +V + +P+ L+ Sbjct: 689 HFELPSETYLFDFDM-ALLLSAATRSNRWTPQFKPFSTLPASERDLAMVVSKSLPSADLL 747 Query: 735 NIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I+ + L++ V + D F+ K LG+ + S A ++ + T DD I+ + +++ + Sbjct: 748 QAIRKAGKPLLESVELIDRFEAKQLGDDRCSQAFRLRYRGKDSTLTDDQIQPVHEKVRQA 807 Query: 794 VVKKTNAVLRS 804 ++K+ LRS Sbjct: 808 LIKQFEVELRS 818 >gi|76799404|ref|ZP_00781556.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] gi|76585240|gb|EAO61846.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] Length = 561 Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 179/564 (31%), Positives = 306/564 (54%), Gaps = 24/564 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I +S ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVI-----ESDKVLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-TYKPRKIVF 406 L + ++S RFE+G++ + + +++ L GG + + +P ++ Sbjct: 354 GRLNLRSESSSRFEKGINYDTVSEAMDFAAAMLQELAGGQVLSGQVTEGVLPTEPVEVST 413 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 V G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RI Sbjct: 414 TLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARI 473 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG +++ + LP S+Q+ R R V+ V + E++ ++ + E++V F Sbjct: 474 YGYEKLPT-TLPEAGATAGELTSMQRLR-RRVRTVAEGAGLSEIITYALTTPEKAVQFST 531 Query: 527 GQREL-EILNPISADMSNMRTSLL 549 + E++ P++ D S +R ++ Sbjct: 532 QATNITELMWPMTVDRSALRQNVF 555 >gi|116490956|ref|YP_810500.1| phenylalanyl-tRNA synthetase beta subunit [Oenococcus oeni PSU-1] gi|116091681|gb|ABJ56835.1| phenylalanyl-tRNA synthetase beta subunit [Oenococcus oeni PSU-1] Length = 807 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 228/838 (27%), Positives = 398/838 (47%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVE----KVDNREALSPFTIVKVLS 51 MK +++W+K+++ + V +K+ D L EV ++ L ++++ + Sbjct: 1 MKVSVNWIKEYMPDFPVNDQVDAQKVADRLALTSTEVAENGYQIPQSSNLVVGKVLEIRT 60 Query: 52 VERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 +E + L AI ++ GK ++ Q+V GAPN+ L V A PG+ +P N + + G Sbjct: 61 IENSSHLKIAI--VNAGK-KDYQIVTGAPNIEKNQLVVLALPGALLP-NGKKIEATTLDG 116 Query: 112 IESTGMMCSEKELMLSDD------SASIMELPID--APVGGRLSDYLELSDPIIDVSLTP 163 S GM+ S +E+ D A I P D VG L + D +ID LT Sbjct: 117 EISQGMLVSLQEIGFDDSIAPKKHEAGIYVFPKDNDVKVGDDAVKALGIDDLMIDTELTA 176 Query: 164 NRSDCIGVRGIALDLVAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 NR D + +RG + A + K ++ S LS I + + D L + + Sbjct: 177 NRGDMLSIRGNLYEFSALLEKEFKLPSLDLQESSKLSKSQISVNV-----DPKLADRYYL 231 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 + V+ +P W+++RL GLR I+ LVD+TNYV L G P H FD +++ +R Sbjct: 232 RIINNVKVEESPLWLQRRLWNSGLRPINNLVDVTNYVMLLFGQPMHAFDLNKLEHK-NIR 290 Query: 280 RACSG-EKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 A S EK LD + + L +++V+ D Q +AG++GG + + T DV++E A+ Sbjct: 291 VALSKDEKFKTLDGKTHQLKDGEDIVVYDDEEPQMLAGVMGGTKSEVTEKTRDVVLESAV 350 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARN 396 ++PI + ++ + + + + RFERG+D+ L +L+ + GG A I + Sbjct: 351 FNPILVRKTARRFNLHSQASQRFERGIDISNCKNALNFAAALLQEVAGGEIAKGIIAGLD 410 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 +KI S++ SG DV + + I +RL F ++F VS+P R D+ K Sbjct: 411 DQSSDKKIKISLSDINNYSGTDVKLAEVENIWQRLNFEYDLSGEEFVVSIPKRRPDITIK 470 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADL+EE +RIYG +++ + LP T V + L++ + R +K VL + + +++S Sbjct: 471 ADLIEEFVRIYGYEKVPAR-LPQT-VNKQSGLTVDEKLDRAIKNVLLGLGLNQAISYSLT 528 Query: 517 SKEQSVLFGGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 E + F G+ E+ + +P+S + S MR S+L LL+A N R D +FE V Sbjct: 529 DTEAAGTFTLGKGDEVSLSHPMSQEHSVMRQSILSTLLQAASYNAVREADDIRLFESGTV 588 Query: 576 YENDT----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ +A I SG+ S W + + D + K ++E Sbjct: 589 FFKQNGVQLPKEDHQVAGLI----SGVPNSN--W----QHNQKKYDFYYIKG----ILES 634 Query: 632 FVSLDSLRF-----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 F+S +L+ S HPGR+ + + LG+ G+ +P I + + N + Sbjct: 635 FLSSLALKSIISYQASDQHKEMHPGRTADVYV-GDHYLGFVGQINPKISKKYKM-NSVFV 692 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLID 745 F++ D + + + L +RDL+ +VD+ I + + +IK N + Sbjct: 693 FQIDSDLV---HELYKMNQDYTPLDKFPGTERDLSLLVDKKIESAEIERVIKANAGNYLR 749 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V D++QGK LGE KKS++ ++ + T D + + RI + K+ + ++R Sbjct: 750 KLQVIDLYQGKELGEDKKSISYRLDFVNTQATITDAQVNQSIKRIEGELTKQLSIMVR 807 >gi|332295536|ref|YP_004437459.1| Phenylalanyl-tRNA synthetase beta chain [Thermodesulfobium narugense DSM 14796] gi|332178639|gb|AEE14328.1| Phenylalanyl-tRNA synthetase beta chain [Thermodesulfobium narugense DSM 14796] Length = 807 Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 226/835 (27%), Positives = 411/835 (49%), Gaps = 62/835 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK +LSWL + L+ + + + L S G+EVE++D + + I ++++ E++PD D Sbjct: 1 MKVSLSWLSEILEESLDEYTVSNILQSSGIEVEQIDEVKTDFNKVVIGRIINHEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + ++V A N+ VG + A GS + I+ K+RGI S GM Sbjct: 61 RLFVVDVDLGGEIK-RIVTAATNLSVGDIVPVALHGSRL-STGTIIKKTKLRGILSEGMF 118 Query: 119 CSEKELMLSDDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL D + IM L + +G L+ L D + D+S+ NR D + V G+A + Sbjct: 119 CSPNELGFGKDHSGIMILNDEKFQIGSDLASVLGEKDYVFDLSIPANRPDLMSVVGVARE 178 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 + A K+K + C S++ P++++ D + C + ++GV+ + ++ +R Sbjct: 179 IGAKLRLKVKINDFECKDSNDFSPIKVRIDFPEG--CLVYLGQWIEGVKVKPSSPFIAER 236 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 LK VG+R I+ +VD TNYV G+P H FD +I++ + VRRA E ++ LD E L Sbjct: 237 LKKVGIRPINNVVDCTNYVMYLFGHPLHAFDMGKINNRIIVRRAFDNECLVLLDGSEVIL 296 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + +++VIA + +AGI+G ++ + TTDV +E A+++ +NI R+ + LGI T++ Sbjct: 297 NENDIVIADESGSIGLAGIMGAGNSEISNATTDVFLEAAIFNHVNIRRTSRRLGIRTEAS 356 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRLSG 416 RFE+G+ + + ++ +I S+ G I I + + I + +V + G Sbjct: 357 IRFEKGLYWKDVSEIISFASKMIASVSDGILHKKIEIDGKVPESSKDIYLVPEKVNSILG 416 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-- 474 D L+ LGF V + F VS P++R D++E DLVEE+ R G D+I S Sbjct: 417 TTFSKTDIQESLQNLGFKVECKDSSFRVSSPTYRLDIKEAEDLVEEVARFQGFDKIPSTL 476 Query: 475 --EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG------ 526 EP+P L + +K A+ E ++ S IS E VL Sbjct: 477 PGEPMP-------GFLPKKIELINKIKSYFANNGFTESISDSLISMED-VLKTNIISTDD 528 Query: 527 -------GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 R +++L+P+S + S +RTS+L L R+++R I D + FEV V+ Sbjct: 529 IDKATFIENRVIKVLSPLSEEHSVLRTSMLEPLTMLLKRHLNRQIYDISFFEVGKVF--- 585 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRL----W----SDKSEERCRFVDLFDAKADALSVIEP 631 +K + + + G+ +G+ W DK+ F +F+ + +++ Sbjct: 586 ----KKINNSFLEENLLGLIATGKRQLDPWRLPVEDKNWSFYSFKGVFENFFRSFGIVDW 641 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +S D +HP S + + VL GE +P IL + ++ ++++ Sbjct: 642 EISSD-------VDYIFHPSISCAFVINDKKVLE-IGEVNPRILHNWEINQTFFYAQLFV 693 Query: 692 DSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 D + K V H+ S+ P RD++ +V + + N IK ++ +++++++ Sbjct: 694 DEFL----DLLEFKNVKHVFSVFPAATRDISMLVSKETFYSKIRNEIKMLECPILENISI 749 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 DV+QGK + E KS+ + + + + T +++I +++I++ + +RS Sbjct: 750 LDVYQGKGIPEDMKSITLSLRFRSEEKTLSNEEITEWVEKIIKKLKDNLGIQIRS 804 >gi|154483723|ref|ZP_02026171.1| hypothetical protein EUBVEN_01427 [Eubacterium ventriosum ATCC 27560] gi|149735633|gb|EDM51519.1| hypothetical protein EUBVEN_01427 [Eubacterium ventriosum ATCC 27560] Length = 805 Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 232/841 (27%), Positives = 393/841 (46%), Gaps = 92/841 (10%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M LSW+K ++ + + + ++ D +T G + E + +A L + ++ +E++PD Sbjct: 1 MNTPLSWIKAYVPELECTDQEYMDAMTLSGTKCEGFERLDADLDKIVVGQIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLGVWAPPG--SCIPENNMIVNVRKI 109 D I +++ G + IQ+V GAPNV+ G L G G E + + K+ Sbjct: 61 DKLVICQVNIGT-ETIQIVTGAPNVKEGQKVPVVLDGGRVAGGHDGSKTEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP------------VGGRLSDYLELSDPII 157 RG+ S GMMCS +EL S E +AP VG + L L D + Sbjct: 120 RGVPSDGMMCSIEEL------GSTREFYPEAPEYGIYIFDDSVQVGADAIEVLGLHDSVF 173 Query: 158 DVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSES-IPLEIKFDLDDSSLCKG 216 + +T NR DC V GIA + AA K + ++ P+ ++ + I ++ D+ LCK Sbjct: 174 EYEITSNRVDCYSVIGIARE-AAATFKKPFKAPVTGPVGTDGDVNDYISVEVKDNDLCKR 232 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-V 275 + VK V+ +P WM++RL A G+R I+ LVDITNYV + G P H +D I+D Sbjct: 233 YCAKVVKNVKIAPSPEWMQRRLSACGIRPINNLVDITNYVMEEFGQPMHAYDLDTIADHK 292 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VRRA GE + LD QE +L ++I + +AGI+GG+++ D+ D+L E Sbjct: 293 IVVRRAEDGENFVTLDGQERELDSGMLMICDGEKPVGLAGIMGGENSMITDDVKDMLFEA 352 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A +D NI S K +G+ TD+ +FE+G+D + LI L G +A Sbjct: 353 ACFDGTNIRLSSKRVGLRTDASGKFEKGLDPNNAESAINRACQLIEELGAGEV----VAG 408 Query: 396 NITYKPRK-----IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPS 448 + P K I F V +L G ++ E + L +YD +++P+ Sbjct: 409 MVDVYPEKKTETTIKFDPDYVNKLIGFNLTEEQMVSYFPALEL----KYDPETKLITIPT 464 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +RQD+ D+ EE+ R YG D I + LP + + LS + +RV Sbjct: 465 FRQDLVGMCDIAEEVARFYGYDNIPT-TLPSGEATSGK-LSYKLRIDEIARRVALYSGFS 522 Query: 509 EVVNWSFISKE--QSVLF---GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + +++SF S + +L ++ + I NP+ D S MRT+ L G+L + N +R Sbjct: 523 QGMSYSFESPKVYDKLLLPKDSKYRQSIVISNPLGEDFSVMRTTPLGGMLTSLATNYNRR 582 Query: 564 IADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 D +FE+ +VY + P+ + + G G G D Sbjct: 583 NKDVRLFEMGNVYLPKELPLKELPDERMQLILGFY-------GEG--------------D 621 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 F K ++E + +++ A ++ HPGR I V+GY GE HP + + Sbjct: 622 FFTMKGVVEELLEQVGMKKRVHYDAKAGKTFLHPGRQANIVYDG-TVIGYLGEVHPTVCE 680 Query: 677 FFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + + Y+ I P + + KK ++ V RD++ +V + IP G + Sbjct: 681 NYNMKT-----RAYIAVIDMPYVYEMSSFDKKYEGIAKFPAVSRDISMVVPKDIPVGKIE 735 Query: 735 NIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I++ + ++ ++FD+++G + +G KSVA ++ + T D DI+ M++I++ Sbjct: 736 EAIESKAGKNLESYSLFDIYEGDQIEDGFKSVAYSIVFRAKDRTLEDSDIQSAMNKILKE 795 Query: 794 V 794 + Sbjct: 796 L 796 >gi|260577989|ref|ZP_05845913.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium jeikeium ATCC 43734] gi|258603879|gb|EEW17132.1| phenylalanyl-tRNA synthetase, beta subunit [Corynebacterium jeikeium ATCC 43734] Length = 852 Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 238/884 (26%), Positives = 402/884 (45%), Gaps = 112/884 (12%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVER 54 M + SWL L T VS E+ +G E E + E P I +V +E Sbjct: 1 MLISQSWLTRILQTSNPQWSVSAEEFDAGFVRVGFETEGYEAIPETTGPLVIGRVEKIEE 60 Query: 55 NPDLDCAILRID--------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + I D TG+ Q I +CGA N G V A PG+ +P ++ Sbjct: 61 LTEFKKPIRYCDVNVGEANGTGELQHI--ICGARNFAEGDNVVIALPGTVLP-GPFEISA 117 Query: 107 RKIRGIESTGMMCSEKELML-SDDSASIMELP------IDAPVGGRLSDYLELSDPIIDV 159 RK G S GM+CS E+ L S +A IM + + VG + L L D I DV Sbjct: 118 RKTYGKISEGMICSAMEVGLASQQNAGIMTISDADLASANLKVGDDARELLGLQDTIFDV 177 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLK-------------EINISCPLSSESIPLEIKF 206 ++TP+R + RG+A +L ++ + + ++ P + + Sbjct: 178 NITPDRGYALSARGLARELASSFDLQFRDPAQDPAAAAMRNDLFAGLPGTDGEVQ---AL 234 Query: 207 DLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 +D+ + C F M V G+ +P W+++ L G R ++ D+TNYV G P H Sbjct: 235 KVDEDTKCSKFGMRKVTGIDPQAESPLWLQRELMLCGQRPVNPATDVTNYVMFLLGQPMH 294 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 FDA ++S L VR A GEK+ LD+ E L P++VVI+ D +QS+AG++GG + Sbjct: 295 AFDADKVSGELHVRLAQKGEKLTTLDDVERTLDPEDVVISDDSGVQSLAGVMGGSTSEIS 354 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 + TT+VL E A WD I +AR+ + + +++ RFERG D + L V+L++++ G Sbjct: 355 ETTTNVLFEAAHWDQITVARTCRRHKLSSEASRRFERGTDAAIIEDALDFAVALLVNIAG 414 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD--- 440 G + + + I S + +G P ++ L +G V G D Sbjct: 415 GEVEEGRTLVGVVPEMPMITIHTSRPGKTAGKIYPDGTTISRLREVGCEVRETGSRDDNG 474 Query: 441 --KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 + EV+ P+WR D+ ADLVEE+LR+ G++ I P + R + +Q R V Sbjct: 475 AREIEVTPPTWRPDLTMPADLVEEVLRLEGLEDI---PSIVPTAPAGRGYTPRQRMRRNV 531 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLF---GGGQREL--EILNPISADMSNMRTSLLPGLL 553 + LA E++ FI+ + ++ R L ++ NP+ +D + + T+LLP ++ Sbjct: 532 GQALAWAGYAEILPTPFIANDVFDVWNLPADDPRRLTVKVQNPLESDYACIGTTLLPSMI 591 Query: 554 KATGRNVDRAIADFAIFEVSHVYEN-------------------------DTPEGQKYMA 588 ++ RNV R D A++ V V D+ Q Sbjct: 592 ESLRRNVTRGQRDVALYGVEQVSLPKSTKPFSPMPSVKQRPGTEELQELLDSLPAQPLHV 651 Query: 589 AGIRKGSSGIEGSGRLWSDKSE-------ERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 A + G+ ++G +W + E R V A+A + + ++R Sbjct: 652 AVVATGNRQLQG---IWGEPESFTAADAIESARVV----ARAAGVEI--------TVRNA 696 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 P +HPGR I ++V G+ GE HP +L+ L E+ LD++P+ + Sbjct: 697 EYLP--WHPGRCAEILVGDKVV-GHAGELHPQVLERAELPPRTVAMEMNLDALPLEE--- 750 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGE 760 T + V LS+ V +D+A +VD+ PA + + ++ L++++ +FDV+ ++LGE Sbjct: 751 TFPRPV--LSAFPAVLQDIAVVVDEATPAQDVEDALRAGAGELLEEIRLFDVYHSEALGE 808 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 GK+S+ + + T +++ + +++ +K A LR+ Sbjct: 809 GKRSLTFSLRFRAPDRTLTEEEASKSREAALQSATEKVGAQLRA 852 >gi|301629975|ref|XP_002944107.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain-like [Xenopus (Silurana) tropicalis] Length = 668 Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 173/544 (31%), Positives = 275/544 (50%), Gaps = 30/544 (5%) Query: 29 GLEVEKVDNREALSPFTIV---KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRV 84 GLEVE++ PF+ + ++ ++P+ D + ++D G + +VCGAPN R Sbjct: 3 GLEVEELA--PVAPPFSKIVVGEITQAVQHPNADRLRVCQVDVGGAAPLAIVCGAPNARP 60 Query: 85 G------LLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPI 138 G L+G PPG + V K+RG+ES GM+CS +EL L++D ++ELP+ Sbjct: 61 GIRVPCALVGAELPPGD--DGKPWHIKVGKLRGVESHGMLCSARELRLANDHGGLLELPL 118 Query: 139 DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSE 198 DAP+G + YL L D + + LTPN + C+ V GIA ++ A LK Sbjct: 119 DAPLGQDIRQYLNLHDTLFTLKLTPNLAHCLSVHGIAREVAALTGAPLKAPTFPVARVGH 178 Query: 199 SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVS 257 + L + D LC F+ V+ V P WM +RL G RS++ LVDI+NYV Sbjct: 179 ADTLPVAISAPD--LCGRFSGRIVRNVNTQAQTPQWMVERLARCGQRSVAPLVDISNYVM 236 Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 + G PSH+FD +I L VR +GE + L+ + VIA ++S+AGI+ Sbjct: 237 FELGRPSHIFDLDKIHGGLEVRWGRAGETLKLLNGNTVTIDDKVGVIADAREVESLAGIM 296 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 GG D T ++ +E A W P IA + TD+ +RFERGVD Q + ++ I Sbjct: 297 GGAATAVSDATKNIYIEAAFWWPKAIAGRSRRYNFSTDAGHRFERGVDPQCTVEHIERIT 356 Query: 378 SLILSLCG------GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 L++ +CG G D C+ N+ +P+ + + ++ G+ + ++ L+RL Sbjct: 357 ELVVQICGTADTQCGPMDDQCV--NLP-QPQPVTLRVARAAKVIGMPLTPAQCVQALQRL 413 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 G +V V P++R D+ + DL+EEI R+ G +Q+ + L + Sbjct: 414 GLTVTEGQGMITVVPPAYRFDLVIEEDLIEEIARMVGYNQLPTT---PPLAPTTPKLPRE 470 Query: 492 QSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLP 550 R + V+R LA E +N+SF+ + G + + +LNPI++ MS MR++LL Sbjct: 471 SRRDPFAVRRQLAGLGYQETINFSFVEERWEHELAGNAQPIRLLNPIASQMSVMRSTLLG 530 Query: 551 GLLK 554 LL+ Sbjct: 531 SLLQ 534 >gi|149175532|ref|ZP_01854152.1| phenylalanyl-tRNA synthetase beta chain [Planctomyces maris DSM 8797] gi|148845517|gb|EDL59860.1| phenylalanyl-tRNA synthetase beta chain [Planctomyces maris DSM 8797] Length = 817 Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 229/854 (26%), Positives = 405/854 (47%), Gaps = 88/854 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ WL+D+L +D +++ D ++GLEVE+ + EAL+P I + E+ P D Sbjct: 1 MRINTGWLRDYLASDCQEQELLDAFMTVGLEVEEEFHLAEALAPIRIGFIR--EKKPLGD 58 Query: 60 CAIL---RIDTGKHQEIQVVCGAPN-------VRVGLLGVWAPPGSCIPENNMIVNVRKI 109 L +++ K + I +VC + + V V + G P G+ I E K Sbjct: 59 TGALYECQVEIEKGKLITIVCASSHPVETGWGVPVAVSGTKLPSGALIGEG-------KF 111 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 +G++S GM+C + EL L S + +A +G L + + +++VS+ PNR DC+ Sbjct: 112 KGVKSQGMLCLDGELGLIARSTGLQVFNDEAMLGASLPSVSPIEESLVEVSVLPNRPDCL 171 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNN 228 G+ G+A + VAA LG + + L+S+S + + + D SLC + GV+ Sbjct: 172 GMIGVARE-VAAVLGMELKYPSARELNSQSAKGDAVTVKILDESLCSRYTCQVFDGVQVR 230 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P+W++ RL+ GLR I+ +VDITN+V L+ G P H FD ++ + + VRR +GEK+ Sbjct: 231 TSPHWLQSRLQTAGLRPINNVVDITNFVMLEWGQPLHAFDFDSLTGNQIEVRRIRNGEKL 290 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD E D + + +VIA + ++AGI+GG + ++ +L+E A +DP+ I S Sbjct: 291 KLLDEAEVDATHEPLVIADGEKPIALAGIMGGWDSQTTTDSKRILLEAACFDPVCIRTSA 350 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS----LCGGTASDICIARNITYKPRK 403 + L I TDS YRFERG D GM+ + + +L AS + + + + Sbjct: 351 RKLRIGTDSSYRFERGTDPNGMLSGAFNRAAELLQDAELSAASPASTVTDSYPSVKQSTQ 410 Query: 404 IVFMNSEVKRLSGIDVP---IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 + V ++ G ++ I+D L LE + D +SVP+WR DV + L Sbjct: 411 FTLSAARVSKILGANISDKQIKDCLTSLE------MQVEDDLTISVPTWRVDVNNEVVLA 464 Query: 461 EEILRIYGVDQIKSEPLPLT----QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 E++ R+ D I +P+ T +V D NL V L S +E Sbjct: 465 EDVARLLRYDSIDMKPMMATTTKGRVSDTDNLR------NSVAGFLTSNGFLECRTPPLT 518 Query: 517 SKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 +++ ++ F + +++ NPIS +M+ +R SL+ L++ RN R + F FEV Sbjct: 519 TEQIALSFSQWPGDAIQVQNPISKEMTTLRQSLVGSLVEVAERNARRGASSFRFFEVDRT 578 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + ++ +++M G+ G + S + S+K +D AK +++ +++ Sbjct: 579 FRQNSEIDERWMLGGVLGGP--VNDSAWIASEKE------IDFLRAKGLVENLLS-HLNV 629 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN----PICGFEVYL 691 D F S P+ + G + + + +G G L+ G+ + P+ GFE+ L Sbjct: 630 DGCTFASDTPANGYRGEEFAVISQGQQRIGALGRID---LETLGIKDRARVPLYGFELDL 686 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV--DQHIP------AGTLVNIIKNVDR- 742 ++ I+ K K L+ + RD++ +V D H + ++N++ Sbjct: 687 STL-ITVKSPPGMFK--GLARTQVIARDISIVVPSDLHYAEIESSLEKAFASAVENLETE 743 Query: 743 -------------LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 ++ V D F G+S+GEG S+ I++L + T + + LMD Sbjct: 744 PRKDAGADFILQPELESVICVDTFSGESVGEGAMSLTIRMLFRDALHTLTSGEAQQLMDY 803 Query: 790 IVENVVKKTNAVLR 803 +V+ + + V R Sbjct: 804 VVKQLQAEYGVVQR 817 >gi|33861428|ref|NP_892989.1| phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|41018293|sp|Q7V1J8|SYFB_PROMP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33634005|emb|CAE19330.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 821 Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 227/864 (26%), Positives = 422/864 (48%), Gaps = 105/864 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK + +WLK ++ + + + + L+ G EVE VD E + + KVLSV ++ + D Sbjct: 1 MKVSQNWLKSLVEINTTAHDLSEKLSIGGFEVESLVDCSENVKGIVLGKVLSVVKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I +D G+ +Q+VCGA NV+ + A G+ + N+ + +IRG+ S GM+ Sbjct: 61 KLSICIVDIGRSNPLQIVCGAKNVKQNIYVYVATVGTHLSAINLTIKKSEIRGVSSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +EL + D S I ++ ++ +G ++ L+L+D I D+++T NR D + V GI Sbjct: 121 CSLEELGIEDTSEGIAIIDEDIALNHNLGTSGAELLDLNDYIYDLAITANRPDGMSVVGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------CVKGVRN 227 A ++ A L E ++ P L+ ++ +++ K F +C C+ + N Sbjct: 181 AREISA-----LLETKLNFP------GLKTRYK---TNVYKNFNLCPEAISKNCLYSISN 226 Query: 228 -------NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 ++P W++ RL G++SI+ LVDITNY+ L++G P H FD ++S+++ Sbjct: 227 IESVNGKQLSPGWLKDRLDKSGIKSINLLVDITNYILLEQGQPLHAFDKDKLSNLIGRKV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+A + E +L L+ + Y L+ + +IA D + +IAG+IGG +++T+ + Sbjct: 287 SYEDFSVRKANNNESLLCLNGENYKLNENITIIACDDKPVAIAGVIGGLETAVNEDTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 +E A+++P+ I +S K +GI T+S R+E+G+ + + + ++++ T+ I Sbjct: 347 YLEGAVFNPVIIRKSSKVIGIRTESSSRYEKGISYKNTLDSVTRAINILEEYFNITSPII 406 Query: 392 CIARNITYKPRKIVFMNSEVKRLSG--------------------IDVPIEDSLRILERL 431 + + K I +K++ G D I + L++ + Sbjct: 407 NTSTELDLKKILIPLRRERIKKILGPIVIRNENYENNSKLEKRYLTDTEITEKLKL---I 463 Query: 432 GFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPLTQVEDKRNLS 489 G ++ I EY +P+ QD+ + DL+EEI R+ G D + P P+ + LS Sbjct: 464 GCTLNIKEYGWDVEIIPNRSQDLLREIDLIEEIARLIGYDMFDLNLPNPIKPGK----LS 519 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLL 549 Q R +K L EV+++S + + ++ L ++I NP+ + S +R ++ Sbjct: 520 SFQIALRKLKTGLIVNGFNEVLSYSLVPESKNNL-------IKISNPLLLETSCLRDNIW 572 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS 609 + +N+ IFEV +++ Q+ + G G++ E L S+K Sbjct: 573 KEHINICNQNIKSGHEYCWIFEVGNIFHKKPDFSQEEILNGAIYGNNKFE--QWLGSNKD 630 Query: 610 EERCRFVDLFDAKADALSVIEPFVSLDSLRFE---SGAPSWYHPGRSGIIKTSAEIVLGY 666 + +A ++ +S+ +L E + + HPGRS + T V GY Sbjct: 631 NNMTYY--------EARGKLKEALSILNLNIEDKPTDTIDFLHPGRSSRLFTEGNEV-GY 681 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK------VVHLSSLHPVKRDL 720 FGE HPN+ +SN I ++YL S+ I+ + T+K ++ ++RD+ Sbjct: 682 FGEIHPNL-----ISNKIALKKMYLFSLKINSILQASTRKNKWITVYKQFPTVPKMERDI 736 Query: 721 AFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 FI ++ +++ IK +L+++V + DV+ S G+ S ++ + + T Sbjct: 737 NFIFNKKYLVSEIISQIKKSGTKLLENVNLIDVYDDDSFGKEFISYTFRLSYRDSEKTLL 796 Query: 780 DDDIRILMDRIVENVVKKTNAVLR 803 D DI L D +VE + KK + LR Sbjct: 797 DSDIGYLHDSVVEIIEKKFSTKLR 820 >gi|317507019|ref|ZP_07964785.1| phenylalanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] gi|316254686|gb|EFV13990.1| phenylalanyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974] Length = 835 Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 193/601 (32%), Positives = 295/601 (49%), Gaps = 35/601 (5%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE-- 53 MK SWL L D S +K+ +TL +G EVE + + + P + +VL +E Sbjct: 1 MKAPYSWLVKALSEDNPGFSTSPKKLSETLVRLGFEVEDLSEPKLVGPVVVGRVLDIEEL 60 Query: 54 ---RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 + P C + +VCGA N G L V A PG+ +P + I + R Sbjct: 61 TGFKKPIRFCQVDVGAAFAGEGGAPRGIVCGATNFAPGDLVVAALPGAVLPGDFAIAS-R 119 Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRS 166 K G S GM+CS EL D + I+ LP A G L L+DP+ D+ +TP+R Sbjct: 120 KTYGRVSDGMICSVAELGFGGDHSGILVLPEGTAEPGADAVLALGLADPVFDLDVTPDRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLK---EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 + VRG+A +L A GLG + ++ P S + + + G+++ V+ Sbjct: 180 YALSVRGLAREL-AIGLGAQHTDLALRVAQPSSVPPVGEGWPIAVAPGTPLAGYSVLEVR 238 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+R L G+RS+ +VD+TN V ++ G P H FDA ++S + VR A Sbjct: 239 GIDPAAPSPWWIRALLAKTGIRSLGLVVDVTNLVMVELGQPLHAFDADKLSGPVQVREAR 298 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE I LD L +VVIA D ++AG++GG+ TT VL+E A +DP Sbjct: 299 EGETITTLDGSLRTLDAKDVVIADDSGPVALAGVMGGESTEVSSATTRVLLEAASFDPSR 358 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 + + LG+++++ RFERGVD L LI+S+ GG + + ++PR Sbjct: 359 TTHTSRRLGLVSEASRRFERGVDPLVAPVALARAAQLIVSIAGGEVAPVRSEVLRKHEPR 418 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 I+ R +G+ P + R L +LG +V GE + V PSWR D+++KADLVEE Sbjct: 419 PIIMPTDLPDRTAGLTYPPGTTYRRLVQLGCTVWGERE-LVVFPPSWRSDLKQKADLVEE 477 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +LR+ G+D+I S L + + L Q R V LA ++V F S S Sbjct: 478 VLRLEGIDRIPSI---LPKATAGKGLLPSQRLRRKVGSALAEEGFLQVPVSPFFS---SA 531 Query: 523 LF--------GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +F G +R + + NP + + T+L+PGLL RN+ R + D A+F ++ Sbjct: 532 VFDDWNLSEKAGRRRTVRLANPQDSAKPELATTLMPGLLDVMARNLSRGMTDLAVFSIAQ 591 Query: 575 V 575 V Sbjct: 592 V 592 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/158 (27%), Positives = 81/158 (51%), Gaps = 3/158 (1%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR ++ V G GE HP +L+ GL C E+ L ++ S+ + K + Sbjct: 680 WHPGRCAYLQAGPWTV-GIAGELHPAVLEKAGLPPGTCVLELNLSAL-GSEGFEEQRKPI 737 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S+ PV++D+A V + +PA ++ +++ L++ + +FDV+ G +GEG+KS+A Sbjct: 738 PPISTYPPVRQDIAVTVAKGVPASSVERALRDGAGDLLEGIRLFDVYSGPQVGEGRKSLA 797 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +DD + K+ A LR+ Sbjct: 798 YALTFRAADRTLTEDDASEARASALAEAAKRCGAELRA 835 >gi|168333579|ref|ZP_02691844.1| phenylalanyl-tRNA synthetase subunit beta [Epulopiscium sp. 'N.t. morphotype B'] Length = 794 Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 217/823 (26%), Positives = 392/823 (47%), Gaps = 48/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +SWLK++++ D ++ D +T G +VEKV+ + ++ + KV++ E++PD Sbjct: 1 MNVPMSWLKEYVNIDADIKTFVDKMTLTGSKVEKVEESGKDITNVVVGKVVAEEKHPDAK 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +++ D G + IQ+V A N++VG + A G+ + N + + +RG+ES GM Sbjct: 61 RLRVMKCDIG-AEVIQIVTAATNLQVGDVVPVALAGADLA-NGLKIKKSNLRGVESNGMF 118 Query: 119 CSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 CS +EL LS DD I P + +G Y L + +++ +T NRSDC Sbjct: 119 CSVEELGLSKEQFPDAPDDGIYIFLNPENMKLGEDAKPYFGLGEQVVEYEITSNRSDCFS 178 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + GIA ++ A I + E K + LC +A +K V+ + Sbjct: 179 ILGIATEVAATFDTAFMFPKIEVAETKEDGTKLAKIAIASPELCNRYAARIIKNVKVKSS 238 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P W++ +L + GLR I+ +VDITN++ L+ G P H FD +++ + VR A +GE++ Sbjct: 239 PKWLQDKLISAGLRPINNIVDITNFLLLEFGQPMHAFDYDKLAGAEINVRLAKNGEEMTT 298 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 L L ++IA + ++AG++GG+ + TT +L E A ++ ++ ++ K Sbjct: 299 LLGDTIKLDDTMLIIADAEKPVAVAGVMGGEDTKVTEETTTILFECANFNAFSVRQTSKK 358 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLI-LSLCGGTASDICIARNITYKPRKIVFMN 408 LGI++DS ++ +G+D + + L LI ++ G + + + +P I + Sbjct: 359 LGIMSDSSKKYVKGIDPEIISCALDRAAQLINMTEAGDVLAGVIDIYPVPREPITIPYDV 418 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + GI + + I R+ F V + V++P+ R DV KADL EE+ RIYG Sbjct: 419 EWINSFLGIKISKAEMEAIFRRVRFVVNADGT---VTIPTTRPDVTMKADLAEEVARIYG 475 Query: 469 VDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 D+I P+ L + + +Q +K L + + ++ I ++ G Sbjct: 476 YDKI---PVTLERATPTVGGKTYEQKVEDKIKETLRNCGAYGIRTYT-IESPKTFDKLGI 531 Query: 528 QRELE----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 EL I NP+ D S MRT+ +L A N + A++E+ V+ E Sbjct: 532 DEELRDAVVIQNPLGEDFSIMRTTTANAMLNALSLNNSKRNESAALYEIGKVFFKAKTEL 591 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + + + K + G+ G D FD K A ++I+ D+ + Sbjct: 592 E--LPSEVEKVTVGLYGPE-------------ADFFDIKGIAETLIKALNIKDASYDRNQ 636 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS-IPISQKKRT 702 ++ HPGR + +IV G+ GE HP +L +G S + E+ L + I ++Q +R Sbjct: 637 ELAFMHPGRCANLLVGNKIV-GFLGEVHPEVLKSYGFSQKVYIMELDLRTLIDVAQTERV 695 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 L + RDLA IV + G ++ +I + +++ +FDV++G+ + G Sbjct: 696 YKP----LPKFPSMTRDLAVIVSREELVGDMIKLINQRGGKILVGTELFDVYEGEQVETG 751 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +KSVA ++ + T D+++ + +I+ + A LR+ Sbjct: 752 QKSVAFNLVFRAKDKTLTDEEVSKSIKKILNGLETNFAAKLRA 794 >gi|312879881|ref|ZP_07739681.1| phenylalanyl-tRNA synthetase beta subunit [Aminomonas paucivorans DSM 12260] gi|310783172|gb|EFQ23570.1| phenylalanyl-tRNA synthetase beta subunit [Aminomonas paucivorans DSM 12260] Length = 803 Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 245/831 (29%), Positives = 401/831 (48%), Gaps = 95/831 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL- 58 M+ WL++ + + E + D LT G EVE ++ ALS + +V+S E +P+ Sbjct: 1 MRVYWKWLEELVTLPLGPEALADRLTMTGTEVESIETPCGALSGVLVARVVSCEPHPEKG 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++R D G +E VV GA N RVG +APPG+ + + ++ R G+ S GM+ Sbjct: 61 SLRVVRADLGGGREATVVTGAANARVGAKFPYAPPGATL-ADGTVLGTRDFDGVSSAGML 119 Query: 119 CSEKELMLSDDSASIM--ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL L LP +AP G + L P++D+S+TPNR D + G+A Sbjct: 120 LSAEELGLEGLDGEGGLLSLPEEAPEGTDFRAWAGLDVPVLDLSITPNRGDLCSLMGVAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKF-------DLDDSSLCKGFAMCCVKGVRNNV 229 ++ GL + + PLS E+++ L+DS C+ +A+ + +R Sbjct: 180 EV--HGLLEDAPLRGPLPLSGTG---EVEWADSFGGIRLEDSG-CEQYALGYGENIRIAP 233 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI--SDVLTVRRACSGEKI 287 AP R +L G+R +S +VD TN L G P H FD R+ SD+ VR A GE++ Sbjct: 234 APLEARLKLLLSGMRPVSNVVDATNLAMLLFGQPLHAFDRDRLPGSDI-RVRGARPGERL 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E L ++VIAS +AG++GG + T +L+E A++DP ++R+ Sbjct: 293 VTLDGKERVLEEQDLVIASGETPIGLAGVMGGLDSEIVPETKRILLESAVFDPSRVSRTS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--RNITYKPRKIV 405 + LG+ + + +RF RG+D ++P ++++ L+ G + + R+I PR ++ Sbjct: 353 RRLGLPSQAAFRFSRGLDSTRVLPAAEYVLDLLSRWAGMRPGNRILHQFRDIP-APRTVL 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSV-----IGEYDKFEVSVPSWRQDVEEKADLV 460 ++R+ D +E+++ LERLGF V +GE D+ VPSWR DVE + DLV Sbjct: 412 LRRETLRRVLLWDG-LEEAVPGLERLGFGVQPQEGLGE-DRVLFRVPSWRNDVEAEEDLV 469 Query: 461 EEILRIYGVDQIKSE-P--LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 EE+ R+ G D+I P L V + L+L+Q V++ +R +EV+ +SF+ Sbjct: 470 EEVGRLRGYDRIAPRIPGCLHGRGVLPESFLALRQ-----VRQAALARGYVEVMTYSFLH 524 Query: 518 KEQSVLFGGGQRELE---------------ILNPISADMSNMRTSLLPGLLKATGRNVDR 562 RELE +LNPIS + MRT +LPGLL+A +N+ Sbjct: 525 P----------RELERLHFSPQDPRGNPPGLLNPISQEQVAMRTCILPGLLRALEQNLRS 574 Query: 563 AI-ADFAIFEVSHVYENDTPEGQK---YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 FE +V+ +D EG + ++A + G L+ D+ E D Sbjct: 575 GWRGSMRFFETGNVFFHDAQEGYRESEHLAGLVYLGKD----RHVLYGDRLRE-----DF 625 Query: 619 FDAKADALSVIEPFVSLDSL--RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 F KAD +E ++ + ++ G + H G++ I + G P + Sbjct: 626 FTVKAD----VEALLAARGIVAQWREGEEPFGHRGQTAAILRDG-VPRGTLCRLKPALAR 680 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH--PVKRDLAFIVDQHIPAGTLV 734 I FE+ LD+ + + V+ + P +RD+A +V PA + Sbjct: 681 ELDAEEGIFVFELDLDAF-------SPAVRGVYGNPFRFPPAQRDVALLVSVDRPAEAVR 733 Query: 735 NIIKNV-DR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 I + DR I V +FD F+GK + EG +S+A VL + T RD+++ Sbjct: 734 EEILTLGDRERIRGVELFDHFEGKGIPEGFRSLAFSVLYRHPDRTLRDEEV 784 >gi|296437865|gb|ADH20026.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis G/11074] Length = 790 Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 217/815 (26%), Positives = 377/815 (46%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 L I E Q++CGAPN R G++ A PG+ + + + KIRG+ES G Sbjct: 61 RLTLAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGAPLECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ + L + +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI--SFLSPVS-LNIPEEFSFASLPQETSICDMHDAGACPVFYSVKISGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++PVL + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPVLHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIELSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + +S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTYSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRNSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|118586225|ref|ZP_01543689.1| phenylalanyl-tRNA synthetase, beta subunit [Oenococcus oeni ATCC BAA-1163] gi|118433341|gb|EAV40043.1| phenylalanyl-tRNA synthetase, beta subunit [Oenococcus oeni ATCC BAA-1163] Length = 807 Score = 267 bits (683), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 227/834 (27%), Positives = 398/834 (47%), Gaps = 58/834 (6%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVE----KVDNREALSPFTIVKVLS 51 MK +++W+K+++ + V +K+ D L EV ++ L ++++ + Sbjct: 1 MKVSVNWIKEYMPDFPVNDQVDAQKVADRLALTSTEVAENGFQIPQSSNLVVGKVLEIRT 60 Query: 52 VERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 +E + L AI +++GK ++ Q+V GAPN+ L V A PG+ +P N + + G Sbjct: 61 IENSSHLKIAI--VNSGK-KDYQIVTGAPNIEKNQLVVLALPGALLP-NGKKIEATTLDG 116 Query: 112 IESTGMMCSEKELMLSDD------SASIMELPID--APVGGRLSDYLELSDPIIDVSLTP 163 S GM+ S +E+ D A I P D VG L + D +ID LT Sbjct: 117 EISQGMLVSLQEIGFDDSIAPKKHEAGIYVFPKDNDVKVGDDAVKALGIDDLMIDTELTA 176 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR D + +RG + A + K N+ SS+ +I ++D L + + + Sbjct: 177 NRGDMLSIRGNLYEFSALLEKEFKLPNLDLQESSKLSKSQISVNVD-PKLADRYYLRIIN 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 V+ +P W+++RL GLR I+ LVD+TNYV L G P H FD +++ +R A S Sbjct: 236 NVKVEESPLWLQRRLWNSGLRPINNLVDVTNYVMLLFGQPMHAFDLNKLEHK-NIRVALS 294 Query: 284 G-EKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 EK LD + + L +++V+ D Q +AG++GG + + T DV++E A+++PI Sbjct: 295 KDEKFKTLDGKTHQLKDGEDIVVYDDEEPQMLAGVMGGTKSEVTEKTRDVVLESAVFNPI 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYK 400 + ++ + + + + RFERG+D+ L +L+ + GG A I + Sbjct: 355 LVRKTARRFNLHSQASQRFERGIDISNCKNALNFAAALLQEVAGGEIAKGIIAGLDDQSS 414 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 KI S++ G DV + + I +RL F ++F VS+P R D+ KADL+ Sbjct: 415 DMKIKISLSDINNYLGTDVKLAEVENIWQRLNFEYDLSGEEFVVSIPKRRPDITIKADLI 474 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE +RIYG +++ + LP T V + L++ + R +K VL + + +++S E Sbjct: 475 EEFVRIYGYEKVPAR-LPQT-VNKQSGLTVDEKLDRAIKNVLLGLGLNQAISYSLTDPEA 532 Query: 521 SVLFGGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + F G+ E+ + +P+S + S MR S+L LL+A N R D +FE V+ Sbjct: 533 AGTFTLGKGDEVSLSHPMSQEHSVMRQSILSTLLQAASYNAVREADDIRLFESGTVFFKQ 592 Query: 580 T----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 P+ +A I SG+ S W + + D + K ++E F+S Sbjct: 593 NGVQLPKEDHQVAGLI----SGVPNSN--W----QHNQKKYDFYYIKG----ILESFLSS 638 Query: 636 DSLRF-----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +L+ S HPGR+ + + LG+ G+ +P I + + N + F++ Sbjct: 639 LALKSIISYQASDQHKEMHPGRTADVYV-GDHYLGFVGQINPKISKKYKM-NSVFVFQID 696 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTV 749 D + + + L +RDL+ +VD+ I + + +IK N + + V Sbjct: 697 SDLV---HELYKMNQDYTPLDKFPGTERDLSLLVDKKIESAEIERVIKANAGNYLRKLQV 753 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++QGK LGE KKS++ ++ + T D + + RI + K+ + ++R Sbjct: 754 IDLYQGKELGEDKKSISYRLDFVNTQATITDAQVNQSIKRIEGELTKQLSIMVR 807 >gi|290890430|ref|ZP_06553505.1| hypothetical protein AWRIB429_0895 [Oenococcus oeni AWRIB429] gi|290479826|gb|EFD88475.1| hypothetical protein AWRIB429_0895 [Oenococcus oeni AWRIB429] Length = 807 Score = 267 bits (682), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 227/838 (27%), Positives = 397/838 (47%), Gaps = 66/838 (7%) Query: 1 MKFTLSWLKDHL-----DTDVSLEKICDTLTSIGLEVE----KVDNREALSPFTIVKVLS 51 MK +++W+K+++ + V +K+ D L EV ++ L ++++ + Sbjct: 1 MKVSVNWIKEYMPDFPVNDQVDAQKVADRLALTSTEVAENGYQIPQSSNLVVGKVLEIRT 60 Query: 52 VERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 +E + L AI ++ GK ++ Q+V GAPN+ L V A PG+ +P N + + G Sbjct: 61 IENSSHLKIAI--VNAGK-KDYQIVTGAPNIEKNQLVVLALPGALLP-NGKKIEATTLDG 116 Query: 112 IESTGMMCSEKELMLSDD------SASIMELPID--APVGGRLSDYLELSDPIIDVSLTP 163 S GM+ S +E+ D A I P D VG L + D +ID LT Sbjct: 117 EISQGMLVSLQEIGFDDSIAPKKHEAGIYVFPKDNDVKVGDDAVKALGIDDLMIDTELTA 176 Query: 164 NRSDCIGVRGIALDLVAAGLGKLK----EINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 NR D + +RG + A + K ++ S LS I + + D L + + Sbjct: 177 NRGDMLSIRGNLYEFSALLEKEFKLPSLDLQESSKLSKSQISVNV-----DPKLADRYYL 231 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 + V+ +P W+++RL GLR I+ LVD+TNYV L G P H FD +++ +R Sbjct: 232 RIINNVKVEESPLWLQRRLWNSGLRPINNLVDVTNYVMLLFGQPMHAFDLNKLEHK-NIR 290 Query: 280 RACSG-EKILALDNQEYDLSP-DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 A S EK LD + + L +++V+ D Q +AG++GG + + T DV++E A+ Sbjct: 291 VALSKDEKFKTLDGKTHQLKDGEDIVVYDDEEPQMLAGVMGGTKSEVTEKTRDVVLESAV 350 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARN 396 ++PI + ++ + + + + RFERG+D+ L +L+ + GG A I + Sbjct: 351 FNPILVRKTARRFNLHSQASQRFERGIDISNCKNALNFAAALLQEVAGGEIAKGIIAGLD 410 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 +KI S++ G DV + + I +RL F ++F VS+P R D+ K Sbjct: 411 DQSSDKKIKISLSDINNYLGTDVKLAEVENIWQRLNFEYDLSGEEFVVSIPKRRPDITIK 470 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 ADL+EE +RIYG +++ + LP T V + L++ + R +K VL + + +++S Sbjct: 471 ADLIEEFVRIYGYEKVPAR-LPQT-VNKQSGLTVDEKLDRAIKNVLLGLGLNQAISYSLT 528 Query: 517 SKEQSVLFGGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 E + F G+ E+ + +P+S + S MR S+L LL+A N R D +FE V Sbjct: 529 DTEAAGTFTLGKGDEVSLSHPMSQEHSVMRQSILSTLLQAASYNAVREADDIRLFESGTV 588 Query: 576 YENDT----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ +A I SG+ S W + + D + K ++E Sbjct: 589 FFKQNGVQLPKEDHQVAGLI----SGVPNSN--W----QHNQKKYDFYYIKG----ILES 634 Query: 632 FVSLDSLRF-----ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 F+S +L+ S HPGR+ + + LG+ G+ +P I + + N + Sbjct: 635 FLSSLALKSIISYQASDQHKEMHPGRTADVYV-GDHYLGFVGQINPKISKKYKM-NSVFV 692 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLID 745 F++ D + + + L +RDL+ +VD+ I + + +IK N + Sbjct: 693 FQIDSDLV---HELYKMNQDYTPLDKFPGTERDLSLLVDKKIESAEIERVIKANAGNYLR 749 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + V D++QGK LGE KKS++ ++ + T D + + RI + K+ + ++R Sbjct: 750 KLQVIDLYQGKELGEDKKSISYRLDFVNTQATITDAQVNQSIKRIEGELTKQLSIMVR 807 >gi|312984332|ref|ZP_07791674.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] gi|310894257|gb|EFQ43337.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus CTV-05] Length = 746 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 211/761 (27%), Positives = 375/761 (49%), Gaps = 42/761 (5%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEV-EKVDNREALSPFTIVKVLSVERNPDL 58 M + +WLKD LD D ++ + +T G+E+ ++V + L + +VL E Sbjct: 1 MLVSYNWLKDFLDLDGQDPYELAEEITRSGVEIPDRVHPMDGLKKLVVGRVLDCEGVEGT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ + +Q+VCGAPNV G + A G+ I N I KIRG+ES GM+ Sbjct: 61 HLHLTHVDVGEDEPLQIVCGAPNVAAGEDVIVALHGARIAGNEKIKK-GKIRGMESYGMI 119 Query: 119 CSEKELMLSDDSA------SIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C +E+ SD I P DA V G + + L + D I++ +TPNR+D +G Sbjct: 120 CGLQEIGFSDSVVPQEFVDGIYVFPADAEVKPGQDVYEALGMDDYILNFDITPNRADTLG 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGVRNNV 229 + G A + V A + + ++ L + D+ D L F + ++ V+ Sbjct: 180 MEGAAYE-VGAIIDQKPKVEEKVVLKEDGPAWTDSLDVKVDEKLAPKFYLRKLENVKIQD 238 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 +P W+++RL G+R I+ +VD+TNY+ L G P H +DA ++ VR A GEK+ Sbjct: 239 SPLWLQRRLWNAGIRPINNVVDVTNYIMLLTGQPMHAYDAKTFANGKFEVRLANKGEKLT 298 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 L+ +E DL P +++I + +AG++GG + TTDV++E A++DP + ++ Sbjct: 299 LLNEKEVDLDPKDIIITDGKKPVMMAGVMGGLDSEITSETTDVILESAIFDPTLVRKAAL 358 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFM 407 T++ R+E+GV+ + L+ + T + I A + +P + Sbjct: 359 RHANRTEASSRYEKGVNWDATEKAINMAALLLRNDADATVDEGILKATDQKREPVVVKTT 418 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S + ++ G + +++ ++I +RL F V + D V VP+ R D+ ADLVEE+ R+Y Sbjct: 419 ASYLNKVLGTKLSVDEIVKIFDRLCFKVDVDGDNLAVHVPNRRWDISIPADLVEEVGRLY 478 Query: 468 GVDQIKS-EP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 G D ++S +P LP T S ++ R +K ++ + +ME +++S S E++V + Sbjct: 479 GYDNLESTQPVLPETH----GGYSEKEEMMRRMKAIVEGQGLMEAISYSLTSPEKAVRYT 534 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-- 582 +EL E+ +P+++ S MR +L+ GL+ A N R A+FE Y++D + Sbjct: 535 KDPKELVEVKSPLNSSRSAMRENLMTGLVDAASYNFARKQTQLALFEQGRTYDHDGGKFN 594 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFE 641 +++AA SG +++ + + VD + K ++ + + + +E Sbjct: 595 EHEHLAAIY---------SGNTFAENWQHLTQKVDFYFVKGQLTNLFNAIGIDPEKVVYE 645 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEF-HP-NILDFFGLSNPICGFEVYLDS-IPISQ 698 + HP R+ I + V G G H I D + + G+E+ LD+ IP+ Sbjct: 646 AKGIKGMHPTRTAGIYIDKQYV-GMIGMIAHAVTIADKALRGSELYGYEIDLDTIIPM-- 702 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 TK V ++RDL+ +VD+ + + N+IK+ Sbjct: 703 --LTKGVTAVPAPKFPAIQRDLSLLVDKPVTNQEIENVIKS 741 >gi|123968524|ref|YP_001009382.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. AS9601] gi|123198634|gb|ABM70275.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. AS9601] Length = 814 Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 229/856 (26%), Positives = 419/856 (48%), Gaps = 94/856 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WL + ++ + E + + L+ G EVE + D E ++ + KVLSV ++ D Sbjct: 1 MKVSQNWLNNLVEITSTPEDLSEKLSIGGFEVESLEDCSENVNGVVLGKVLSVLKHEGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q++CGA N++ + A G+ + N+ + +IRG+ S GM+ Sbjct: 61 KLSICQVDIGNSRNLQIICGARNIKPNIYVYIATVGAKLNAVNLNIKRSEIRGVMSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +EL L D S I +L +G S+ L+L+D I D+++T NR D + V GI Sbjct: 121 CSLQELGLEDSSEGIEIIDEDLASKHELGTPASELLQLNDFIYDLAITANRPDGMSVLGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------------C 221 A ++ A L E ++ P L K+++ L KG +C C Sbjct: 181 AREISA-----LLESTLNSP------ELNHKYNI---QLLKGIKLCPEAIESNCIYTISC 226 Query: 222 VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 + GV + ++PNW++ R++ G++SI+ LVD+TNY+ L++G P H FD ++S+++ Sbjct: 227 IDGVNGDKLSPNWLKDRIEKSGIKSINLLVDLTNYILLEQGQPLHAFDKDKLSNLIGKEV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+ E+++ LD +EYDL+ + VI + +IAG+IGG + T+ + Sbjct: 287 SPEDFSVRKGKDNERLICLDGKEYDLNDNITVITCCDKPVAIAGVIGGIETSVTNTTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS-LCGGTA-- 388 +E A+++P+ I +S K +GI T+S R+E+G+ + I + ++L+ C + Sbjct: 347 YLEGAVFNPVTIRKSSKAVGIRTESSSRYEKGISSKNTISAVTRAINLLEQYFCINSPII 406 Query: 389 --------SDICIA--RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 DI I RN +K + +N + ++ + D I D L++ +G ++ + Sbjct: 407 NTSNLISNEDIFIKLRRNRIHKILGPLIINDQSEKRNLSDNEIVDKLKL---IGCTLKNK 463 Query: 439 YDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTR 496 ++V+V P+ D+ + DL+EEI R+ G D+ + P P+ + LS +Q R Sbjct: 464 EYGWDVAVIPNRSHDLIREIDLIEEIARLIGYDRFDLKLPNPIKPGK----LSSEQLALR 519 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 VK EV+++S + ++ L ++I NP+ + S +R ++ L+ Sbjct: 520 KVKNGFIDNGFNEVLSYSLVPEDNEKL-------IKISNPLLLETSCLRNNIWKEHLEIV 572 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 RN+ IFE+ +V+ T Q+ + G G+ G+ + + + Sbjct: 573 NRNIKAGQESCYIFEIGNVFHKKTDFIQEEVLNGAIYGNKKF---GKWLNSGKDNHLNYY 629 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN-IL 675 +ALS + + +D +S + HPGR+ + + GYFGE HP IL Sbjct: 630 QARGKLKEALSSLN--IKIDDKPTDS--IDFLHPGRTAKLIIEGKDA-GYFGEIHPKLIL 684 Query: 676 DFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPV----KRDLAFIVDQHIP 729 + L +VYL +I +S + T+ K + + +P+ +RD+ F+ + Sbjct: 685 EKKSLK------KVYLFNINVSNLLEASTRKNKWIPIYKQYPIVPKMERDINFVFSKKFL 738 Query: 730 AGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + + I+ + L++DV + DVF+ GE S ++ + T D DI + Sbjct: 739 ISDITSQIRKTGKNLLEDVNLLDVFEDTKFGEDHISYTFRLSYRDKDKTLLDSDITSIHS 798 Query: 789 RIVENVVKKTNAVLRS 804 I+ NV K + LR+ Sbjct: 799 NIISNVEKCFDTKLRN 814 >gi|323342068|ref|ZP_08082301.1| phenylalanyl-tRNA synthetase beta subunit [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464493|gb|EFY09686.1| phenylalanyl-tRNA synthetase beta subunit [Erysipelothrix rhusiopathiae ATCC 19414] Length = 791 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 224/812 (27%), Positives = 395/812 (48%), Gaps = 59/812 (7%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 D+ + DTLT+ GLEVE ++ + T+ VL + D D + ++D G E Sbjct: 16 DIDTLTLADTLTNAGLEVEGIEPLIHGTHLTVGHVLECVPHEDSDHLNVCQVDLGDRVE- 74 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD----- 128 Q+VCGA N++ GL A G+ +P + + K+RG+ES GM+CS EL +++ Sbjct: 75 QIVCGASNIKAGLYVCVAQVGAVLP-GDFNIKASKVRGVESNGMICSLNELGVAEKFQTE 133 Query: 129 -DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGK-- 185 I+ LP P G + L L D I+D+S TPNRSD + + IA + V+A G+ Sbjct: 134 EQKTGIVVLPKAEP-GSNPAVALGLDDEILDISQTPNRSDFMSIISIAHE-VSALFGREL 191 Query: 186 -LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLR 244 L + + + SE+ L+I+ + S L F + + +P W+R+ L G++ Sbjct: 192 TLPQFDGASDTGSET-ELKIQSYTEKSPL---FLGKVIGNITIGTSPAWIREALIGSGIK 247 Query: 245 SISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVV 303 I+ +VDI+N V L+ G+P H +D + + L+VR G + ALD Q YDL +++V Sbjct: 248 PINNVVDISNLVMLETGHPMHFYDIDFLKNQDLSVRDDFEG-TVEALDGQTYDLEKNDLV 306 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 I + IAGI+G ++ ++ +++EVA ++ +++ ++ LG+ ++S R+ + Sbjct: 307 IMNGSVPVGIAGIMGLGNSMIQPHSRGLVIEVARFNHVSVRKTATRLGLSSESSTRYTKP 366 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIA-RNITYKPRKIVFMNSEVKRLSGIDVPIE 422 +D + VSL++ +A + + ++ P + + + G + Sbjct: 367 MDNNASKQAMDRAVSLLMEYASASALEETVQWGSLDSTPVVVSITVDRINKYLGTALEEA 426 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 + + + ERL F ++PS+R+D+ + DL+EE++RI G D + E LPL + Sbjct: 427 EIINVFERLNFKPQNLDGNITCTIPSYRKDIAIEEDLIEEVIRIVGYD-VMDETLPLMDL 485 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMS 542 NL+ QQ + R ++ VL ++++++ + + ++V + + NPIS + Sbjct: 486 T-LGNLNDQQLKARMIEDVLLGFGADQILSYTLVDESKTVGSESLGSPIRLANPISDKRA 544 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +RT LLP +++ N I+D FE S VY A G + G+ G G Sbjct: 545 YLRTHLLPSMVEVLAYNNAHKISDVLFFEQSSVY-----------AKGAKSNRLGVIGQG 593 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW----YHPGRSGIIKT 658 LW+ + +D + K + + E + + RF+ + +HP + Sbjct: 594 SLWNQNWTKTDIPLDFYTLKGMIMELFEK-LGFNEKRFQFKQSGFDDTKFHPFK------ 646 Query: 659 SAEIV-----LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 SAEI+ LG G+ HP + L +PI E+ LD + + K V Sbjct: 647 SAEILFDRKHLGVIGQLHPLYAKEYDLKDPIY-LEIDLDYLLGQKAGAIKATSVAK---- 701 Query: 714 HPV-KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLI 771 +P+ RDLA + D + L+ I+ V R + D+ VFDVF + LG KKS+A Q+ Sbjct: 702 YPIMTRDLAILCDNEVAVSDLIQSIEKVSRKYLVDLNVFDVFTSEKLG-NKKSIAFQLSF 760 Query: 772 QPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T ++I +M ++E + K+ N +R Sbjct: 761 GQDR-TLEVEEINDIMSAVIEELKKRFNVEVR 791 >gi|291458932|ref|ZP_06598322.1| phenylalanyl-tRNA synthetase, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] gi|291418186|gb|EFE91905.1| phenylalanyl-tRNA synthetase, beta subunit [Oribacterium sp. oral taxon 078 str. F0262] Length = 808 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 225/834 (26%), Positives = 381/834 (45%), Gaps = 75/834 (8%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVE--KVDNREALSPFTIVKVLSVERNPD 57 M +++WLK+++ + D + E+ D +T G +VE ++ NR L K+LS+E +PD Sbjct: 1 MNSSMNWLKEYVPELDCTPEEFSDAMTLSGTKVETCRILNRN-LRKIVTGKILSIEPHPD 59 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVR 107 D I ++D G +Q+V GA N++ G L G G +PE+ + ++ Sbjct: 60 ADRLVICQLDIGTGDAVQIVTGAHNMKPGDIVPVVLDGGKVAGGHEGGALPEDGIEIHAG 119 Query: 108 KIRGIESTGMMCSEKEL------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 K+RG+ S GMMCS +EL + I P PVG L L+D + + + Sbjct: 120 KLRGVPSYGMMCSIEELGADRAFYPEAPESGIYIFPEGTPVGEDAPSLLGLNDALHEYEI 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 T NR DC V GIA + A + S + +K ++D LC + Sbjct: 180 TSNRVDCYSVLGIAREAAATFRKRFFPPKEDTSEGSGDVHELLKVKVEDPELCPRYTARI 239 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRR 280 VK +R +P WM+ RL + G+R I+ LVDITNYV L+ G P H +D +I + VRR Sbjct: 240 VKNLRLAPSPKWMQLRLASAGIRPINNLVDITNYVMLEYGQPMHAYDYDKIRGHEIIVRR 299 Query: 281 ACSGEKILALDNQEYDLSPDNVVIA---SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 A GE LD + D S D+ V+ DG I IAGI+GG+++ +D+ +++E A Sbjct: 300 AEDGESFQTLDQK--DRSLDHTVLTIRDRDGAI-GIAGIMGGQNSKIEDSVKTMVLEAAC 356 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICI 393 ++ NI S + +G TD+ FE+G+D + L+ L G DI Sbjct: 357 FNGANIRLSARKVGERTDASAFFEKGLDPNLASQAMNRACELVEKLGAGEPVGGMIDIYE 416 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 R +P + SE+ L G + E+ ILER S E + V+ P++RQD+ Sbjct: 417 RRR---EPSVVHCTASEINALLGTSLSPEEMKAILEREELSTELEGENLTVTAPTFRQDI 473 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 D+ EE+ R YG I P+ L LS + S + + + + Sbjct: 474 HRMCDIAEEVARFYGYASI---PMSLPSGAAIGGLSTELSIDERCRHSAEALGYSQAYLY 530 Query: 514 SFISKEQSVLF-----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 SF S + ++++ I NP+ D S +RTS G+L + N R D Sbjct: 531 SFESPKACDRLLLPEDAPERQQIRIQNPLGEDFSVLRTSSANGMLGSLSTNFKRKNRDIR 590 Query: 569 IFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 ++E+++VY + P+ + + G + D D F K Sbjct: 591 LYEMANVYLPKSLPLTELPDERMQLTLGA-------------YGD--------CDFFSLK 629 Query: 623 ADALSVIEPFVSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 D ++ +++ P S+ HPGR I LGY GE HP +L+ +G+ Sbjct: 630 GDLELILNRLGLKKRFHYDAACPQSFLHPGRRADILYEGR-RLGYLGELHPEVLENYGIG 688 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNV 740 + LD + R + + + L+ V RD + +V + AG + ++ I+ Sbjct: 689 ER--AYLAVLDMKEVYPFVRDEI-RYLPLAKFPSVSRDFSMLVPLSVTAGEIEDVLIQRS 745 Query: 741 DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + ++++ +FD++ G + G KS+A + ++ T +++I ++ ++++ + Sbjct: 746 GKFLEELKLFDIYIGAQVLSGYKSMAYTLTLRAKDHTLTEEEINAVVRKVLDGL 799 >gi|78779314|ref|YP_397426.1| phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9312] gi|91208127|sp|Q31AV5|SYFB_PROM9 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78712813|gb|ABB49990.1| phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9312] Length = 814 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 225/859 (26%), Positives = 428/859 (49%), Gaps = 100/859 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WLK+ ++ + + + L+ G EVE + D + ++ + KVLSV ++ D Sbjct: 1 MKVSQNWLKNLVEISSTPVDLSEKLSIGGFEVESLEDCSKNVNGVVLGKVLSVLKHDGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q++CGA N++ + A G+ + ++ + +IRG+ S GM+ Sbjct: 61 KLSICQVDIGTSKNLQIICGARNIKPNVYVYVATVGAKLNAVDLTIKRSEIRGVMSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +EL L D S I +L + +G +SD L+L+D I D+++T NR D + V GI Sbjct: 121 CSLQELGLEDSSEGIEIIDEDLALKHELGTPVSDLLQLNDFIYDLAITANRPDGMSVIGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------------C 221 A ++ A L E +S P L K+++ L KG +C C Sbjct: 181 AREISA-----LLESKLSFP------ELNHKYNI---HLNKGIKLCPEAITSNCIYTISC 226 Query: 222 VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 + GV N ++P W++ R++ G++SI+ LVD+TNY+ L++G P H FD ++S+++ Sbjct: 227 IDGVNGNKLSPIWLKDRIEKSGIKSINLLVDLTNYILLEQGQPLHAFDKEKLSNLIGKDV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+A E ++ LD ++Y+L+ + V+ + +IAG+IGG + T+ + Sbjct: 287 SPEDFSVRKAKDNESLVCLDGKKYELNENITVVTCSDKPVAIAGVIGGLETSVSNTTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI-----LSLCGG 386 +E A+++P+ I +S K +GI T+S R+E+G+ + I + ++L+ ++L Sbjct: 347 YLEGAVFNPVTIRKSSKAVGIRTESSSRYEKGISSKNTISAVTRAMNLLEEYFSINLPII 406 Query: 387 TASDICIARNITYKPRKI--------VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 S++ +I K R+ + +N + ++ + D I D L + +G S+ + Sbjct: 407 NTSNLKNNEDIFIKLRRSRIHKILGPLIINDQFEKRNISDTEIVDKLTL---IGCSLKSK 463 Query: 439 YDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRTR 496 ++V+V P+ QD+ + DL+EEI R+ G D+ + P P+ + LS +Q R Sbjct: 464 EYGWDVAVIPNRSQDLIREIDLIEEIARLIGYDRFDLNLPNPIKPGK----LSSEQLALR 519 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 VK EV+++S + +++ L ++I NP+ + S +R ++ L+ Sbjct: 520 KVKNGFTENGFNEVLSYSLVPEDKETL-------IKISNPLLLETSCLRDNIWKEHLEIV 572 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 RN+ IFE+ +V+ +T QK + G G+ E W + +++ + Sbjct: 573 NRNIKAGQNSCYIFEIGNVFHKNTEFIQKEVLNGAIFGNKRFEK----WVNSNKDND--L 626 Query: 617 DLFDAKA---DALSVI------EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + + A+ +ALS + +P S+D L HPGR+ + + GYF Sbjct: 627 NYYQARGKLKEALSSLNIKIDDKPTDSIDFL----------HPGRTAKLIIEGKDA-GYF 675 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQ 726 GE HP ++ + F + +D++ + ++ K + + P ++RD+ F+ + Sbjct: 676 GEIHPKLILEKKSLKIVYLFSINVDNLLGASTRKNKWIPIFKQYPIVPKIERDINFVFSK 735 Query: 727 HIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 + ++IK + L++DV + D+F+ LGE S ++ + T D DI+ Sbjct: 736 KFLISDITSLIKKTGKNLLEDVYLIDIFEDIKLGEDYISYTFRLSYRAQDKTLLDSDIKT 795 Query: 786 LMDRIVENVVKKTNAVLRS 804 + I+ N+ K LR+ Sbjct: 796 IHSSIISNIEKSFQTKLRN 814 >gi|229829379|ref|ZP_04455448.1| hypothetical protein GCWU000342_01468 [Shuttleworthia satelles DSM 14600] gi|229792542|gb|EEP28656.1| hypothetical protein GCWU000342_01468 [Shuttleworthia satelles DSM 14600] Length = 806 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 227/838 (27%), Positives = 381/838 (45%), Gaps = 79/838 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M+ +L W+K + DV+ ++ D +T G +VE + A L + ++LS+ + D Sbjct: 1 MRTSLKWIKALVPGLDVTPQEFADAMTLAGNKVEYYTDLAADLDKIVVGRILSIRPHEDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP--------ENNMIVNVRKI 109 D I ++D G + IQ+V GAPN+R G L A G + E + + K+ Sbjct: 61 DHLLICQVDVGT-KTIQIVTGAPNIREGQLVPVALDGGRVAGGHDGSKTEGGIRIKAGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD--------SASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 RG+ S GMMCS +EL S D + E D G + L L D +++ + Sbjct: 120 RGVSSEGMMCSIEELGSSRDMYPEAPEYGIYVFEEDADLMPGDDVVRALGLDDVVVEYEI 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 T NR DC V G+A + A ++ + E + + ++ + LC + Sbjct: 180 TSNRVDCFSVLGLAREAAATFGRDFCPDPVTETGNREDVRDYVSVEVKNHDLCARYTARL 239 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRR 280 VK V+ +P WM++RL A G+R I+ +VDITNYV + G P H +D RI+D + VR Sbjct: 240 VKNVKIAPSPKWMQRRLMAQGIRPINNIVDITNYVMEEYGQPMHAYDLDRIADQRIVVRN 299 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 A GEK +LD QE+ L ++I + +AGI+GG ++ D+ +L E A +D Sbjct: 300 AAEGEKFTSLDGQEHTLDASMLMICDKDKPIGLAGIMGGANSMITDDVHTMLFEAATFDG 359 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARN 396 NI S + G+ TD+ +FE+G+D I + LI L G DI R Sbjct: 360 TNIRLSSRRAGLRTDASAKFEKGLDPNLAIEGMNRACQLIEELGAGEVVGGVIDIYPER- 418 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 P + F L G + E + L+ LG + +K ++ +P++RQD+ Sbjct: 419 --VNPWTLPFQADAYNHLLGTQISPEQMIEYLKPLGIGY--DREKEQLQIPTYRQDLHCD 474 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 AD+ EEI R YG I P L LS +Q ++ + + +SF Sbjct: 475 ADIAEEIARFYGYANI---PTSLPGGSYAGGLSRKQRIEGLIRDTAEFCGFSQAMCYSFE 531 Query: 517 SKE--QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S +L ++ + I NP+ D S MRT L G+L + G N R AD ++E Sbjct: 532 SPRVFDKLLLPAEDPLRKAIRISNPLGEDFSIMRTCSLNGILTSLGTNYSRRNADVWLYE 591 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-------VDLFDAKAD 624 + +V Y+A + ++ EER + +D + K Sbjct: 592 MGNV----------YLAKSLP------------LTELPEERLKLTLGGYGAIDFYQMKGA 629 Query: 625 ALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 ++ D + ++ SG P + HPGR I + + GY G+ HP+ +G+ + Sbjct: 630 VEEILAKLDMRDRVSYDPGSGYP-FLHPGRQANIHYEGQEI-GYIGQMHPSAAGNYGIKD 687 Query: 683 PICGFEVYLDSIPISQK--KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 P VY+ + + + K +++ +RDL+ +V + I AG + +I + Sbjct: 688 P-----VYVAVLDVGELVCHANFAVKYEGIANFPASRRDLSMVVPREILAGDIEDIFASC 742 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 R+++ +FD+++G + G KS+A + + D+D+ MD I++ + +K Sbjct: 743 GGRILESYELFDIYEGAQILSGYKSMAYTLTFRAKDRNLSDEDVNQSMDSILKALKEK 800 >gi|296436004|gb|ADH18178.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis G/9768] gi|297140365|gb|ADH97123.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis G/9301] Length = 790 Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 216/815 (26%), Positives = 377/815 (46%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + I E Q++CGAPN R G++ A PG+ + + + KIRG+ES G Sbjct: 61 RLTVAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGAPLECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ + L + +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI--SFLSPVS-LNIPEEFSFASLPQETSICDMHDAGACPVFYSVKISGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++PVL + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPVLHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIELSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + +S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTYSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRNSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|113954961|ref|YP_730546.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. CC9311] gi|113882312|gb|ABI47270.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. CC9311] Length = 816 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 227/840 (27%), Positives = 408/840 (48%), Gaps = 60/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +LSWL+D + + +++ + L+ G EVE++D+ L+ +V VL +++P+ D Sbjct: 1 MRVSLSWLQDLVQVTEAADQLGERLSMAGFEVEEIDDLSRLAQGVVVGHVLKRDKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + +Q+VCGA NVR G+ A G+ +P N+ + ++RG+ S GM+ Sbjct: 61 KLSVCVVDIGAEETVQIVCGASNVRAGIHVPVATIGAVLPAVNLTIKAGELRGVASQGMI 120 Query: 119 CSEKELMLSDDSASIMEL-----PIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL + D I L + AP G ++ L L D ++D+++T NR D + + G Sbjct: 121 CSLAELGQATDVDGIAVLDDLLESLPAP-GTAVASCLGLDDTVLDLAITANRPDGLSMTG 179 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--FAMCCVKGVRN-NVA 230 IA + VAA G +++ P++ +S+ + +++ +G +A+ V G+ VA Sbjct: 180 IARE-VAALTGA--PLHLPQPVAPQSVTDLNPSEEHAAAMKEGGVYALTEVSGLDGGQVA 236 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-----SDV----LTVRRA 281 P+W++QRL G++ ++A+VDITN V L++G P H FD + SD+ +R+ Sbjct: 237 PSWVQQRLLRAGVKPVNAIVDITNLVMLEQGQPLHAFDLDALERLCGSDLTPSDFGLRQG 296 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 + E LD + +L ++ R +IAG+IG +G + T +L+E AL+ P Sbjct: 297 RAKESFTGLDGRTIELDERVQLVTCRDRPVAIAGVIGSAESGVTETTRKILLESALFTPA 356 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITY 399 +I S + G+ TD+ R+E+G+ Q +P + L+ L GG A S C + Sbjct: 357 SIRSSSRATGLRTDASSRYEKGLPRQITLPAAGRALELMEQLLGGMAGLSWQCCSDE--- 413 Query: 400 KPRKIVFMNSE-VKRLSG---------IDVPIEDSLRILERLGFSVIGEYDKFEVSV-PS 448 P +V + + +L G DV + L LG + + + V V PS Sbjct: 414 GPEPLVTLRRHALHQLLGPLVAEDGEATDVSDQQVEECLSALGCHLNSSEEGWTVLVPPS 473 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 R D+ + DL+EE+ R+ G D + P PL L+ +Q R ++R L S + Sbjct: 474 RRMDLLREVDLIEEVARLVGFDSFGAHLPDPLA----PGGLTDRQQAERRLRRRLCSAGL 529 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 E+ S + + I NP+ A+ S++RT+L L+ RN+ + Sbjct: 530 QEITCLSLTGADAD-----DPNRIPISNPLLAETSHLRTALWQEHLQICQRNLQASQPGC 584 Query: 568 AIFEVSHVYEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE+ HV+ D Q G+ I G R+ + + D F A+ AL Sbjct: 585 WVFEIGHVFHPLDREIVQSARLGGV------ICGERRVSRWATSGKALVPDYFMARG-AL 637 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 + + + L++ HPGR+ + LG FG+ HP + + L + Sbjct: 638 ATVFNSLGLETQDRPLADDPRLHPGRAAAVVVEGR-TLGCFGQLHPMLCAQYELPDATYL 696 Query: 687 FEVYLDSIPISQKKRTK-TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 F++ L + + +R + S+L ++RDLA +V + +P+ L+ I+ + L+ Sbjct: 697 FDLDLQRLLEAVTRRNRWVPSFKAFSTLPAMERDLAMLVPKTLPSADLMQAIRKAGKPLL 756 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V + D F+G L + + S A ++ + T D+ ++ + D++ + +VK+ LRS Sbjct: 757 ESVELIDRFEGGQLPDDQCSQAFRLRYRGKDSTLTDEQLQPVQDKVRQALVKQFKVELRS 816 >gi|323356724|ref|YP_004223120.1| phenylalanyl-tRNA synthetase beta subunit [Microbacterium testaceum StLB037] gi|323273095|dbj|BAJ73240.1| phenylalanyl-tRNA synthetase beta subunit [Microbacterium testaceum StLB037] Length = 836 Score = 266 bits (679), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 188/600 (31%), Positives = 301/600 (50%), Gaps = 30/600 (5%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M+ LSWL++++D D + + + L S+G E E V E P + +V P Sbjct: 1 MRVPLSWLREYVDVPADATPDDVLAALVSVGFEEEDVHRFELSGPIVVGQVTEFTPEPQS 60 Query: 59 DCAILR---IDTG-KHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + +R +D G +H ++ +VCGA N G V PGS +P + RK G Sbjct: 61 NGKTIRWCQVDVGDEHGGVRGIVCGAGNFFEGDKVVVTLPGSVLP-GPFPIAARKTYGHV 119 Query: 114 STGMMCSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM+ S KEL L + + I+ +L IDAPVG L L D +++++TP+R + Sbjct: 120 SDGMIASAKELGLGSEHSGILRLVDLGIDAPVGTDAIALLGLDDIAVEINVTPDRGYALS 179 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG------FAMCCVKG 224 +RG+A + A ++ + P +DD + +G F V+ Sbjct: 180 LRGVAREYSHATGAAFRDPGTGHEDAVARTPRGFPLAVDDRAPIRGRQGASEFVARIVRD 239 Query: 225 V-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 V + P WM RL G+RS+ L+DITNYV L+ G P H +D R+ +TVRRA Sbjct: 240 VDPSRPTPPWMITRLSLAGIRSLGVLIDITNYVMLELGQPIHGYDLDRLQGGITVRRAEE 299 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEK+ LD Q LS ++++I + +AG++GG D T +VL+E A +D ++I Sbjct: 300 GEKLETLDGQVRTLSAEDLLITDESGPIGLAGVMGGGPTEMSDATRNVLIEAATFDQVSI 359 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVL--KHIVSLILSLCGGTA-SDICIARNITYK 400 AR+ + + +++ RFERGVD ++P + + + SL++ L GGT +++ + TY+ Sbjct: 360 ARTARRHKLPSEASRRFERGVDP--LVPYVAAERVASLMVELAGGTLDAELGGSLGSTYR 417 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 I V L G++ ++ + L +G +V + V PSWR D+ +K L Sbjct: 418 REAITLPAGFVSGLIGVEYTDDEIVSSLRLIGCTVEERDGGWSVIAPSWRHDLSDKWTLA 477 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RI G D+I S L R L+ Q R V LA+ +E ++ F ++EQ Sbjct: 478 EEVARIEGYDRIPSV---LPTPPSGRGLTGAQQGRRRVANALAAAGFVETPSFPFTTEEQ 534 Query: 521 SVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + L G + +++ NP+ +R SL+P +L+ RNV R I D A+FEV V+ Sbjct: 535 NALHGSPSGDTLPSVKLANPLDGLAPFLRRSLIPAMLQVAHRNVSRGIVDLALFEVGTVF 594 >gi|15605202|ref|NP_219988.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis D/UW-3/CX] gi|237802903|ref|YP_002888097.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis B/Jali20/OT] gi|237804825|ref|YP_002888979.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis B/TZ1A828/OT] gi|12644563|sp|O84481|SYFB_CHLTR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3328910|gb|AAC68075.1| phenylalanyl tRNA Synthetase Beta [Chlamydia trachomatis D/UW-3/CX] gi|231273125|emb|CAX10038.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis B/TZ1A828/OT] gi|231274137|emb|CAX10931.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis B/Jali20/OT] gi|296436931|gb|ADH19101.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis G/11222] gi|297748604|gb|ADI51150.1| Phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis D-EC] gi|297749484|gb|ADI52162.1| Phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis D-LC] Length = 790 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 216/815 (26%), Positives = 377/815 (46%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + I E Q++CGAPN R G++ A PG+ + + + KIRG+ES G Sbjct: 61 RLTVAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGAPLECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ + L + +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI--SFLSPVS-LNIPEEFSFASLPQETSICDMHDAGACPVFYSVKISGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++PVL + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPVLHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIELSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + +S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTYSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRDSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|255311288|ref|ZP_05353858.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis 6276] gi|255317590|ref|ZP_05358836.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis 6276s] Length = 790 Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 216/815 (26%), Positives = 377/815 (46%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + I E Q++CGAPN R G++ A PG+ + + + KIRG+ES G Sbjct: 61 RLTVAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGASLECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ + L + +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI--SFLSPVS-LNIPEEFSFASLPQETSICDMHDAGACPVFYSVKISGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++PVL + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPVLHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIELSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + +S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTYSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRDSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|256545520|ref|ZP_05472880.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] gi|256398731|gb|EEU12348.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerococcus vaginalis ATCC 51170] Length = 792 Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 227/827 (27%), Positives = 392/827 (47%), Gaps = 66/827 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAI 62 L W D++ D L+ I D L+ G VE V+ + L + KVL E++P+ D + Sbjct: 5 LIWQNDYIKLDEDLKTITDRLSETGSHVESVNFISDKLDGLVVGKVLKQEKHPNADKLFV 64 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEK 122 L ID G +EI +V A N + G + GS I N ++ + GI S GM+ S K Sbjct: 65 LTIDVG--EEITIVTSAKNTKEGDYLIVIKSGSEI--NGQKIDDHEFFGIVSQGMLTSYK 120 Query: 123 ELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 E+ D ++ L + G + L + P+I+ +TPNR DC+ + G+A Sbjct: 121 EIGYDDSVIEKKSKDGVIVLSGEFKPGTPAVEVLFSNTPVIEYEITPNRPDCLSIIGMAR 180 Query: 177 DLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 + A+ K+ ++ P S+ +EIK S CK F +K V+ +P Sbjct: 181 ESAASFDKKITYPSLEYPTVSDKKEDYFNGIEIK-----SKNCKRFTGRIIKNVKVGESP 235 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILAL 290 W++ L G+R ++ +VDITN+V L+ G P H +D + D + VR A GE I L Sbjct: 236 QWLKNCLMLAGMRPVNNVVDITNFVMLETGQPLHAYDLETLHDRKIIVRDANDGEIIKTL 295 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D +E L+ + +VI+ +AGI+G + +NT +L+E A +D NI +S K L Sbjct: 296 DGEERKLNEEVLVISDGKEAIGLAGIMGSMDSEITENTKTILLESANFDSDNIRKSSKFL 355 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR-KIVFMNS 409 + +++ RFE+ + ++ K ++ LI L G + I P K+ S Sbjct: 356 NLRSEASSRFEKEISVENADFASKRVMKLITDLGIGEVLEDYFDEGIKESPENKVKLRIS 415 Query: 410 EVKRLSGIDVPIEDSLRILERL-GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + L G D +D++ L+ L + D E ++P++R D+ +ADL+EE+ R+YG Sbjct: 416 RLNSLIGKDFSKDDAISYLKSLEFDIEDIDDDTIEANIPNFRMDISIEADLIEEVARLYG 475 Query: 469 VDQIKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGG 526 + +++S+PL + Q +K + L + +K L + E+ +SFIS ++ L Sbjct: 476 MGKVESKPLYSSLQRGEKTPMRLLKDE---LKNNLFGQKFSEITTYSFISPRDYDKLLVD 532 Query: 527 GQREL----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN---D 579 +L +I+NP+ D S MRT+LL +L +N+ + D +E+ + D Sbjct: 533 ENSKLRDYIKIINPLGEDYSVMRTTLLSNMLDTFYKNISKKQNDLRFYEIGTAFIKDGAD 592 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 PE ++Y+ G L+ D S F DL D ++ R Sbjct: 593 LPEEKQYLTMG-------------LYGDYS-----FYDLKDFFIKSMKK----TGFYGFR 630 Query: 640 FESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 FE+ +HPGR I E + G G+ +++ F + NP E+ L I + Sbjct: 631 FETEENIKTFHPGRCANIYLDGEKI-GIMGQISYEVMEEFKIKNPALALEIDLSMI---K 686 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKS 757 K+ K LS + RD +F D+++ + + + II + L+ ++ +FD++ G Sbjct: 687 DKKIDQVKYKALSKFPSILRDYSFTCDRNVESQMIEDIIISRANGLVRNIEIFDIYTGSQ 746 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + G+KS++ +V T +D+++ + +E++ K+ N LRS Sbjct: 747 IDHGQKSISYKVAYGKNNGTLKDEEVEKIEKEFLEDLSKE-NINLRS 792 >gi|195953248|ref|YP_002121538.1| phenylalanyl-tRNA synthetase subunit beta [Hydrogenobaculum sp. Y04AAS1] gi|195932860|gb|ACG57560.1| phenylalanyl-tRNA synthetase, beta subunit [Hydrogenobaculum sp. Y04AAS1] Length = 755 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 201/749 (26%), Positives = 362/749 (48%), Gaps = 58/749 (7%) Query: 48 KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 ++LS+++ + + C + DT I V+ A NV VG A G+ I + ++ Sbjct: 47 EILSIQKPENFNLCKVFLGDTT----IDVITSASNVYVGAKVPVAVKGATI--DGKTIDT 100 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 + +G ES GM+ S EL L D I+ L + VG ++ L+ + +++ +TPNR Sbjct: 101 KTFKGFESQGMLLSASELGLDDIEEGILILGNNVEVGKDVASLLDFGEYVLECEITPNRG 160 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-DSSLCKGFAMCCVKGV 225 D + + GI+ + ++A K NI + +P +I D+ ++ C + V+G+ Sbjct: 161 DLLSIVGISRE-ISAITNKPFNFNIE-----QGLPEKIDIDISIETQGCYRYIGSIVEGL 214 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 + W+++ L +GL++IS +VDITNYV + G P H FD +I D + +R+A E Sbjct: 215 SVKSSKLWLKKALWKMGLKTISNVVDITNYVMMMLGQPLHAFDKDKIGDKIIIRQAKQKE 274 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 K+ ALD +EY+L +VIA+D ++AG+IGG + +T ++L+E AL+DPI + + Sbjct: 275 KLTALDKKEYELDESIMVIANDKGPIALAGVIGGLDSSISYDTKNILLESALFDPIFVRK 334 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + K L + TD+ YRFERGVD+ + + LI GG T +K Sbjct: 335 ASKTLKLSTDASYRFERGVDIDMALKASVFALKLIEKEAGGKVVGYNEVIRETLPVKKFF 394 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEIL 464 ++ R + ++ E I+ +LG E PS R D++ DL+EEI+ Sbjct: 395 LPMNDYVRYTALNFEKEKISEIINKLGIPNKPMRCGIEFEAPSHRYYDIDSSIDLIEEIV 454 Query: 465 RIYGVDQIKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 RI + + EPL L + DK+ + +K L + + EV+N SF E Sbjct: 455 RITDFNSFEIEPLTLLPKPSDKKEYIYE------IKNKLVATGLKEVINLSFDKIEDYEA 508 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G + +EI NPI +R L P +++ +NV + I DFA FE+S++++ D+ Sbjct: 509 LGLEKPTIEIKNPILPSFRFLRRYLTPSMIRLADQNVKKHIYDFATFEISNIFKEDS--- 565 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q + +G I + + +E + ++ + F Sbjct: 566 QPTSICILLRGHKRIYPKTKWNINHIKEIVKTIN------------------KDIMFGFS 607 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 + + HP + G + T +G+FG +IL IC FE+ + K Sbjct: 608 SLPFLHPYQQGSL-TFDNKDIGFFGVLKSDILQ----DTIICEFEI---------PNKAK 653 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGK 762 + +S P+ RD++ I+ L+ +I+ ++++V VFD ++G+ + E K Sbjct: 654 YHDIKEISKYPPIVRDISLIMSIDFDVQKLIILIREFFGSMLENVLVFDFYKGEQIEENK 713 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 KSV +++ ++ L + D+++ +L+++++ Sbjct: 714 KSVGLRLSLRALDRSLEDEEVNVLIEKLL 742 >gi|126696327|ref|YP_001091213.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9301] gi|126543370|gb|ABO17612.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9301] Length = 814 Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 227/856 (26%), Positives = 416/856 (48%), Gaps = 94/856 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WLK+ ++ + E + + L+ G EVE + D + ++ + KVLSV ++ D Sbjct: 1 MKVSQNWLKNLVEITSTPEDLSEKLSIGGFEVESLEDCSKNVNGVVLGKVLSVLKHEGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q++CGA N++ + A G+ + ++ + +IRG+ S GM+ Sbjct: 61 KLSICQVDIGNSKNLQIICGARNIKPNIYVYVATVGTKLNAVDLTIRRSEIRGVMSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +EL L D S I +L + +G SD L+L+D I D+++T NR D + V GI Sbjct: 121 CSLQELGLKDSSEGIEIIDEDLALKHELGTPGSDILQLNDFIYDLAITANRPDGMSVIGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------------C 221 A ++ A L E ++ P L K+++ L KG +C C Sbjct: 181 AREISA-----LLESTLNFP------ELNHKYNI---HLLKGIKLCPEAIEFNCIYTISC 226 Query: 222 VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 + GV ++PNW++ R++ G++SI+ LVD+TNY+ L++G P H FD ++S+++ Sbjct: 227 IDGVNGEKLSPNWLKDRIEKSGIKSINLLVDLTNYILLEQGQPLHAFDKDKLSNLIGKEV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+ E + LD +EY L+ + VI + +IAG+IGG + T+ + Sbjct: 287 SPEDFSVRKGKDNESLFCLDGKEYKLNDNITVITCCDKPVAIAGVIGGLETSVSNTTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI----------- 380 +E A+++P+ I +S K +GI T+S R+E+G+ + I + ++L+ Sbjct: 347 YLEGAVFNPVTIRKSSKAVGIRTESSSRYEKGISSKNTINAVTRAINLLEEYFSINSPII 406 Query: 381 --LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 +L I + RN +K + +N + ++ + D I D L + +G ++ + Sbjct: 407 NTSNLISNEDIFIKLRRNRIHKILGPLLINDQFEKRNLSDNEIVDKLTL---IGCTLKNK 463 Query: 439 YDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTR 496 ++V+V P+ D+ + DL+EEI R+ G D+ + P P+ + LS +Q R Sbjct: 464 EYGWDVAVIPNRSHDLIREIDLIEEIARLIGYDRFDLKLPNPIKPGK----LSSEQLALR 519 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 VK EV+++S + ++ L ++I NP+ + S +R ++ L+ Sbjct: 520 KVKNGFIENGFNEVLSYSLVPEDDEKL-------IKISNPLLLETSCLRDNIWKEHLEIV 572 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 RN+ IFE+ +V++N + QK + G G+ G+ + + + Sbjct: 573 NRNIKAGQVSCYIFEIGNVFQNKSEFIQKEVLNGAIYGNKKF---GKWINSGKDNDLNYF 629 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN-IL 675 +ALS + + +D +S + HPGR+ + + GYFGE HP IL Sbjct: 630 QARGKLKEALSSLN--IKIDDKPTDS--IDFLHPGRTAKLVIEGKDA-GYFGEIHPKLIL 684 Query: 676 DFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHP----VKRDLAFIVDQHIP 729 + L +VYL +I +S T+ K + + +P ++RD+ F+ + Sbjct: 685 EKKSLK------KVYLFNINVSNLLGASTRKNKWIPIYKQYPIVPKIERDINFVFSKKFL 738 Query: 730 AGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + + IK + L++DV + DVF+ G+ S ++ + T D DI + Sbjct: 739 ISEITSQIKKTGKNLLEDVNLLDVFEDTKFGDDHISYTFRLSYRDKDKTLLDSDITSIHS 798 Query: 789 RIVENVVKKTNAVLRS 804 I+ N+ K N LR+ Sbjct: 799 NIISNIEKSFNTKLRN 814 >gi|76789211|ref|YP_328297.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis A/HAR-13] gi|91208234|sp|Q3KLM3|SYFB_CHLTA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|76167741|gb|AAX50749.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis A/HAR-13] Length = 790 Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 215/815 (26%), Positives = 376/815 (46%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + I E Q++CGAPN R G++ A PG+ + + + K+RG+ES G Sbjct: 61 RLTVAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKVRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGAPLECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ + L + +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI--SFLSPVS-LNIPEEFSFASLPQETSICDMHDAGACPIFYSVKISGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++PVL + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPVLHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I+ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIEFSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + +S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTYSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRDSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|254526671|ref|ZP_05138723.1| phenylalanyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] gi|221538095|gb|EEE40548.1| phenylalanyl-tRNA synthetase, beta subunit [Prochlorococcus marinus str. MIT 9202] Length = 814 Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 231/858 (26%), Positives = 420/858 (48%), Gaps = 98/858 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WLK+ ++ + E + + L+ G EVE + D + ++ + KVLSV ++ D Sbjct: 1 MKVSQNWLKNLVEITSTPEDLSEKLSIGGFEVESLEDCSKNVNGVVLGKVLSVLKHEGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q++CGA N++ + A G+ + ++ + +IRG+ S GM+ Sbjct: 61 KLSICQVDIGNSKNLQIICGARNIKPNIYVYVATVGTKLNAVDLTIKRSEIRGVMSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +E+ L D S I +L + +G SD L+L+D I D+++T NR D + V GI Sbjct: 121 CSLQEMGLEDSSEGIEIIDEDLALKHELGTPGSDLLQLNDFIYDLAITANRPDGMSVIGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------------C 221 A ++ A L E + P + K+++ L KG +C C Sbjct: 181 AREISA-----LLESTLYFP------EINHKYNI---HLLKGIKLCPEAIESNCIYTISC 226 Query: 222 VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 + GV ++PNW++ R++ G++SI+ LVD+TNY+ L++G P H FD ++++++ Sbjct: 227 IDGVNGEKLSPNWLKDRIEKSGIKSINLLVDLTNYILLEQGQPLHAFDKDKLTNLIGKGV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+ E +L LD +EYDL+ + V+ + +IAG+IGG + T+ + Sbjct: 287 SPEDFSVRKGKDNESLLCLDGKEYDLNDNITVVTCCDKPVAIAGVIGGLETSVSNTTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-- 389 +E A+++P+ I +S K +GI T+S R+E+G+ + I + ++L+ +S Sbjct: 347 YLEGAVFNPVTIRKSSKEVGIRTESSSRYEKGISSKNTINAVTRAINLLEEYFSINSSII 406 Query: 390 ---------DICIA--RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 DI I RN +K + + + ++ + D I D L + +G ++ + Sbjct: 407 NTSNLISDEDIFIKLRRNRIHKILGPLIIKDQFEKRNLSDNEIVDKLTL---IGCTLKNK 463 Query: 439 YDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 ++V+V P+ D+ + DL+EEI R+ G D+ L L LS +Q R Sbjct: 464 EYGWDVAVIPNRSHDLTREIDLIEEIARLIGYDRF---DLKLPNPIKPGKLSSEQLALRK 520 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 VK EV+++S + ++ L ++I NP+ + S +R ++ L+ Sbjct: 521 VKNGFIENGFNEVLSYSLVPEDDEKL-------IKISNPLLLETSCLRDNIWKEHLEIVN 573 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 RN+ A IFE+ +V++ PE ++ + G+ I G+ + + R ++ Sbjct: 574 RNIKAGQASCYIFEIGNVFQK-KPE---FIQEEVLNGA--IYGNKKFGKWINSGRDNDLN 627 Query: 618 LFDAKA---DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN- 673 F A+ +ALS + + +D ES + HPGR+ + + GYFGE HP Sbjct: 628 YFQARGKLKEALSSLN--IKIDDKPTES--IDFLHPGRTAKLFIEGKDA-GYFGEIHPKL 682 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPV----KRDLAFIVDQH 727 IL+ L +VYL +I +S T+ K V + +P+ +RD+ F+ + Sbjct: 683 ILEKKSLK------KVYLFNINVSNLLGASTRKNKWVPIYKQYPIVPKMERDINFVFSKK 736 Query: 728 IPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRIL 786 + + I+ + L++DV + DVF+ G+ S ++ + T D DI + Sbjct: 737 FLISEITSQIRKTGKNLLEDVNLLDVFEDSKFGDDHISYTFRLSYRKKDKTLLDSDITSI 796 Query: 787 MDRIVENVVKKTNAVLRS 804 I+ NV K N LR+ Sbjct: 797 HSNIISNVEKFFNTKLRN 814 >gi|148239626|ref|YP_001225013.1| phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] gi|147848165|emb|CAK23716.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. WH 7803] Length = 818 Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 226/848 (26%), Positives = 403/848 (47%), Gaps = 74/848 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +LSWLKD + + +++ D L+ G EVE++++ L+ +V VL ++P+ D Sbjct: 1 MRVSLSWLKDLVQVNEPADQLGDRLSMAGFEVEELEDLSLLAQGVVVGHVLEKTKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G +Q+VCGAPNVR G+ A G+ +P + + ++RG+ S GM+ Sbjct: 61 KLSVCSVDVGAEAPLQIVCGAPNVRAGIHVPVAMVGAVLPAVKLTIKAGELRGVSSQGMI 120 Query: 119 CSEKELMLSD--DSASIME-LPIDAPVGG-RLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL + D +I+E L + P G ++ L L D ++++++T NR D + + GI Sbjct: 121 CSLAELGQTSAVDGIAILEDLVFEVPAPGVSIAPVLGLDDTVLELAITANRPDGLSMTGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA---P 231 A ++ A L + P S E++ ++ +G + ++ + A P Sbjct: 181 AREVAALTGSDLSLPDTPAPTSCEALTPSAG---SAEAMQRGGIYAVTEVMQLDGAKRSP 237 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRAC 282 WM+QRL+ G+ ++A+VDI N V L++G P H FDA + + +R+A Sbjct: 238 QWMQQRLQRAGVNPVNAVVDIGNLVMLEQGQPLHAFDADALESLCGQPIKAADFGLRQAH 297 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 E LD ++ L V+ R +IAG++G + +D T + +E AL+ P + Sbjct: 298 DQEPFRGLDGRDLVLDSRVQVVTCCDRAVAIAGVMGSANTAVNDTTQRIWLESALFTPTS 357 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-------------GTAS 389 + S + G TDS R+E+G+ + + +SL+ ++ G G A Sbjct: 358 VRSSSRATGQRTDSSSRYEKGLPREITLLAAGRALSLLKTMLGAEIGQTWQCAAEPGPAP 417 Query: 390 DICIARNITYK---PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 + + RN ++ P ++E + L D +E L+ LG S+ D +EV V Sbjct: 418 VVELRRNALHQLLGPLAPTAPDAEAQDLD--DGRVEACLK---SLGCSLTATDDGWEVIV 472 Query: 447 -PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 PS R D+ + DL+EE+ R+ G D +S P PL LS Q R +++ L + Sbjct: 473 PPSRRLDLLREVDLIEEVARLVGFDHFESHLPDPLR----PGQLSTAQQAERRLRQRLCA 528 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 + EV S + S + I NP+ A+ S++RT+L L+ RN+ + Sbjct: 529 FGLQEVTTLSLTRADDS-----DANRIAISNPLLAETSHLRTALWQEHLEICQRNLQASQ 583 Query: 565 ADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +FE+ +V+ D+ Q+ G+ I G RL ++ + + F+A+ Sbjct: 584 PGCWLFEIGNVFSPDSSGVHQQSRLGGV------ICGERRLSRWRTSGKTAPLSYFEARG 637 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 L+ + + +DS+ HPGR+ + + LG FG+ HP++ D F L Sbjct: 638 -ILTALLSSLGIDSMDRRLSDDVRLHPGRAATVVVEGK-PLGCFGQLHPSLCDDFELPP- 694 Query: 684 ICGFEVYLDSIPISQKKRTKTK------KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 E YL + T+ + S+L +RDLA +V + +P+G L+ I Sbjct: 695 ----ETYLFDFDTALLLNAATRNNRWIPQFKTYSTLPAAERDLAMVVSKSLPSGDLLQAI 750 Query: 738 KNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 + + L++ V + D F+ LG + S A ++ + T DD I+ + +++ + ++K Sbjct: 751 RKAGKPLLESVELIDHFESDQLGADRCSQAFRLRYRGKDSTLTDDQIQPVHEKVRQALIK 810 Query: 797 KTNAVLRS 804 + LRS Sbjct: 811 QFEVELRS 818 >gi|255994892|ref|ZP_05428027.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium saphenum ATCC 49989] gi|255993605|gb|EEU03694.1| phenylalanyl-tRNA synthetase, beta subunit [Eubacterium saphenum ATCC 49989] Length = 805 Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 217/828 (26%), Positives = 397/828 (47%), Gaps = 58/828 (7%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD-CAI 62 + W+ + +T + + G VE + +S + ++ S+E++PD D + Sbjct: 5 IEWINKYANTGTDEAAYVENMVMSGSNVESCTCQSQGVSNVVVGRINSIEKHPDADKLVV 64 Query: 63 LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTGMMCS 120 + ID G + + ++ GA NV G L A G+ + N I +++ IRG+ S GM+CS Sbjct: 65 MDIDVG-DKILNIITGAKNVFEGALVPVAMHGATVYSKNGIQKIKRGEIRGVVSDGMLCS 123 Query: 121 EKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 +EL S + I + DA +G + D L L +D +TPNRSDC+ + G+ Sbjct: 124 LEELGFSINVIPEKYRDGIFIISEDANLGEDIRDALGLYGSTVDFEITPNRSDCLSITGL 183 Query: 175 ALDLVAAGLGKLKEINISCPLS-SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A + A K + + S I IK +D + C + V ++ +P Sbjct: 184 ARETAACMDNDFKAPDTTLENECSGDINSMIKVRIDTKN-CNRYYARVVNDIKIEDSPWE 242 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALDN 292 M++ L G+R I+ +VDITN+V L+ G P H FD + + + A GEK LD Sbjct: 243 MQKFLMEAGVRPINNIVDITNFVMLELGQPMHAFDYKSLEKADIIITDADEGEKFTTLDG 302 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E L D++VI + + GI+GG+++ DNT +++E A ++ NI + K + + Sbjct: 303 RERTLFADSLVIRDGDKSVGLGGIMGGENSQIRDNTNVIMLEAANFNASNIRSTSKKISL 362 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMN 408 +++ RFE+G+D ++ L+ L G D+ + + P+K+ Sbjct: 363 RSEASQRFEKGLDSNLCKVAIERACHLVEKLGAGVIMEGFLDVYPNKAV---PKKVHARV 419 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S + ++ G D+ + LERL +V + D +++VP++R D+ E+ D++EEI R+YG Sbjct: 420 SRINKVLGTDITSDVIKEYLERLCMTVDVKGDDLDIAVPTFRLDINEEVDIIEEIGRLYG 479 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + ++ L + + SL+ + + +L E+ +SF S + Sbjct: 480 FNNLE---YTLPKSNNASTQSLEYTLVEKSRNILTGLGASEICCYSFTSPRNILKMSEDD 536 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQ 584 E + +LNP+ + S MR+ LLP +L+ RN + I+ FE+ V++ + + Sbjct: 537 AEENLITLLNPLGEENSVMRSQLLPSMLEVLARNYSKNISKVRAFEIGRVFKKVSKDTDD 596 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFE 641 ++ ++ K S G+ GS + D F K +I + + L R+E Sbjct: 597 EFESSEKLKLSLGLYGSDQ-------------DFFTLKG----IINEYLACIGLKKPRYE 639 Query: 642 SGA--PSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 PS H GR+ I T+ + + LG+ GE P+I D +G+ + E+ D I Sbjct: 640 QATDIPSL-HRGRTARIYTADKNNPVFLGFIGEIDPDIADDYGIGDRCYAAELDFD---I 695 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQG 755 K+ + KK L + RD+A +VD + +++I+ + + L++D+ +FD+++G Sbjct: 696 LSKESSLDKKYKPLPKHPAIVRDIAVVVDNDVKVAEILDIVWEASNDLLEDIELFDIYRG 755 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + EGKKS+A + + T D++I+ + I++ + + T LR Sbjct: 756 DQIEEGKKSLAFTLTYRGKDITLTDEEIKPVHALILKQIEEGTGGKLR 803 >gi|116074875|ref|ZP_01472136.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] gi|116068097|gb|EAU73850.1| phenylalanyl-tRNA synthetase, beta subunit [Synechococcus sp. RS9916] Length = 839 Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 226/844 (26%), Positives = 408/844 (48%), Gaps = 61/844 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVERNPDLD 59 M+ +LSWL+D + + +++ + L+ G EVE++D+ L+ +V VL +++PD D Sbjct: 17 MRVSLSWLQDLVQVNEPADQLAERLSMAGFEVEEIDDLSRLAQGVVVGHVLERDKHPDAD 76 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGA NVR G+ A G+ +P + + ++RG+ S GM+ Sbjct: 77 KLSVCKVDVGAGEALQIVCGASNVRAGIHVPVAMVGAVLPAVGLTIKAGQLRGVASEGMI 136 Query: 119 CSEKELMLSDD--SASIMELPIDA--PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL S D +I+E +D+ G + L L D ++++++T NR D + + GI Sbjct: 137 CSLAELGQSTDVDGIAILEDLLDSVPAPGTPAAPALGLDDTVLELAITANRPDGLSMTGI 196 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN----NVA 230 A + V+A G ++ + L+ ++ E+ D + K + + +R+ + Sbjct: 197 ARE-VSALTGAALQLPL---LTPPAVTAELTTDPASADRMKSGGVYGITEIRDVDSSKPS 252 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LTVRRA 281 P W+++RL G+ S++ +VD+TN V L++G P H FDA + + +R A Sbjct: 253 PIWLQRRLDRAGMNSVNTVVDLTNLVMLEQGQPLHAFDADVLDQLCGGDVTAKDFGLRNA 312 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE ALD +E L ++ +++G++G + +G +T V +E AL+ P Sbjct: 313 KDGETFQALDGRELTLDSRAQLVTCRDLPIALSGVMGSEASGVTTSTKRVWLESALFSPT 372 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 + + ++ G T++ R+E+G+ + + + ++LI GGTA + P Sbjct: 373 AVRNTSRSAGSRTEASTRYEKGLPREITLLSAQRAIALITEHLGGTADQTFVCAKPFEAP 432 Query: 402 RKIVFMNSEVKRLSG---IDVPIEDS-----LRILERLGFSVIGEYDKFEVSVPSWRQ-D 452 I S + +L G D ED R L LG + D + V+VP R D Sbjct: 433 AAIALRRSALHQLLGPLSTDAGPEDLDDAEIGRCLTALGCDLTATEDGWSVTVPPSRSCD 492 Query: 453 VEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 + + DL+EE+ R+ G D+ +S P PL + LS Q R ++ + + EV Sbjct: 493 LTREVDLIEEVARLIGFDRFESHLPDPL----EPGQLSASQRAERQLRNLFCGAGLQEVT 548 Query: 512 NWSFISKE-QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 + S S E ++ G Q E + I NP+ A+ S++R SL L+ RN+ + Sbjct: 549 SLSLTSAEPEANPVGAEQPEARIAISNPLLAETSHLRASLWEEHLRVCQRNLQASQNGCW 608 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 +FE+ +V+ D G+ + G I G RL + + D + A+ AL+ Sbjct: 609 LFEIGNVFALD---GEAITQSAQLSGV--ICGERRLERWTTSGKPSLPDYYAARG-ALTR 662 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV-----LGYFGEFHPNILDFFGLSNP 683 I + L+ L HPGR SAE+V LG FG+ HP + + F L + Sbjct: 663 IFKALKLEVLDRPLNTDGRLHPGR------SAELVLEGRPLGCFGQLHPLLAEQFDLPDE 716 Query: 684 ICGFEVYLDSIPISQKKRTK--TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 F++ L + + RT T +++ ++RDLA +V + + L+ I+ Sbjct: 717 TYLFDLDLQRL-LDAATRTNRWTPAFKPFATVPAMERDLAVVVPRTQRSADLLQAIRKAG 775 Query: 742 R-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 + L++ V + D F+G L + + S A ++ + T DD ++ + +++ + + K+ A Sbjct: 776 KPLLESVELIDRFEGGQLADDQCSQAFRIRYRGKDSTLTDDQLQPVHEKVRQALAKQFKA 835 Query: 801 VLRS 804 LRS Sbjct: 836 ELRS 839 >gi|257066827|ref|YP_003153083.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] gi|256798707|gb|ACV29362.1| phenylalanyl-tRNA synthetase, beta subunit [Anaerococcus prevotii DSM 20548] Length = 795 Score = 263 bits (672), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 225/819 (27%), Positives = 385/819 (47%), Gaps = 52/819 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M L W KD++ D L+ I D L+ G VE+V + L + KV ++ + D Sbjct: 1 MLVPLIWQKDYIKIDKDLKTITDRLSETGSHVEEVTIHTSDLDGILVGKVTEQVKHVEAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L ID GK + I ++ A N + G G+ + + +I + GI S GM+ Sbjct: 61 RLQVLTIDIGKDEPITIITNAKNTKKGDYLPVITSGTKLDDGTVIED-HDFFGIVSQGML 119 Query: 119 CSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 + EL D ++ + G LS + + P+I+ +TPNR DC+ + Sbjct: 120 TAYSELGYEDSVIPKELREGVIVFEGEYEPGTPLSQVIHSNSPVIEYEITPNRPDCLSII 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + A+ K+ ++ + E I +S C F K V +P Sbjct: 180 GMARETAASFGEKITYPSLDFKENDEDIKDYSNGVSIESDKCNRFVARVAKNVEVKRSPQ 239 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 W++ L G+R I+ +VDITN+V L+ G P H +D +++D + VR A GE + LD Sbjct: 240 WLQNYLMLAGMRPINNIVDITNFVMLETGQPLHAYDLDKLADQKIIVRDAREGEILKTLD 299 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 + L P +VIA +AG++GG + +T ++L+E A +D NI +S K LG Sbjct: 300 GVDRKLDPSMLVIADGKEAIGLAGLMGGMDSEVTKDTKNILLEAANFDQANIRKSSKTLG 359 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE- 410 + +++ RFE+GV ++ + + LI L G I I + V + E Sbjct: 360 LRSEASSRFEKGVPVEMADFASRRAMKLIDELAIGEVVGGSIDEGIKEREEMKVDLRLER 419 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGV 469 + L+G+D ++ ++R LE L F V DK V VP +R DV +ADL+EE++R+YG+ Sbjct: 420 LNMLTGVDFDLDTAIRNLELLEFEVEKLDDKRLRVRVPYFRSDVTIEADLIEEVVRLYGM 479 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR----AMMEVVNWSFISKEQSVLFG 525 I++ PL + +R S+ R ++ L S+ E+ +SFIS + G Sbjct: 480 GNIENAPLVSSLQRGER------SKRRLLRDELCSKLVGQKFSELATYSFISPREYDRLG 533 Query: 526 GGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + ++++NP+ D S MRTS +P +L +N+ D FE+ +E + Sbjct: 534 VDKDSNLRDYIKLINPLGEDYSVMRTSQVPSMLDVIAKNIKYGQKDMRFFELDRTFEKTS 593 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + K I + L+ D S F DL D LS+ E V F Sbjct: 594 DKLPK----------ENITLTMGLYGDYS-----FYDLKDFF--TLSMGE--VGFTGFTF 634 Query: 641 ESGAPSW-YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQK 699 ++ + +H GR I + V G GE + D + + E+ L I + Sbjct: 635 KANENIYAFHAGRCADIFYEGDHV-GIMGEISYEVRDEYEIDKGALILEINLAKI---ED 690 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSL 758 KR +K ++ ++RD +F+ D+++ + + N I+ N L+D +++FD++ G+ + Sbjct: 691 KRIIDRKYKQIAKFPAIERDYSFVCDRNLESELIENTIRENGSGLVDKISLFDIYTGEHI 750 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 E KKS++ +VL + T +D DI + +I+E + K+ Sbjct: 751 EEDKKSISYKVLYRAKDRTLKDKDIAGIEKKILECLAKE 789 >gi|33865761|ref|NP_897320.1| phenylalanyl-tRNA synthetase subunit beta [Synechococcus sp. WH 8102] gi|41018289|sp|Q7U6V9|SYFB_SYNPX RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33632931|emb|CAE07742.1| Phenylalanyl-tRNA synthetase beta subunit [Synechococcus sp. WH 8102] Length = 814 Score = 263 bits (671), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 228/847 (26%), Positives = 394/847 (46%), Gaps = 76/847 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD 59 M+ +LSWLK + S+E + L+ G E E++++ A + +V V E++P+ D Sbjct: 1 MRVSLSWLKQLVQVTDSVEALAHRLSMAGFEEEEIEDLSARAKGVVVGFVKDREKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + IQ+VCGA NVR GL A G+ +P N+ + ++RG+ S GM+ Sbjct: 61 KLSVCQVDIGSEESIQIVCGAKNVRAGLHVPVAMVGAELPAVNLTIKSGELRGVSSNGMI 120 Query: 119 CSEKELMLSDDSASIMELPIDA------PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL L+ +S I EL DA +G ++ L L D ++++++T NR D + + Sbjct: 121 CSLSELGLATESDGIAEL--DALTDELPALGAPVAPMLGLDDTVLELAITANRPDGLSMV 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM--------CCVKG 224 GIA ++ A L ++ P+ + L+ +L +S AM ++G Sbjct: 179 GIAREVAA-----LTGSALTLPV----LTLKPAHELLQASAASAEAMQAGGLYGITLIEG 229 Query: 225 VR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-------- 275 V + V+P W++QRL+ G+ ++A+VDITN V L++G P H FDA + + Sbjct: 230 VDGSQVSPTWVQQRLERAGINRVNAVVDITNVVMLEQGQPLHAFDADALEQLTGKPVNAA 289 Query: 276 -LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 +R+A GE + LD +E L V+ ++AG++G K +G T + +E Sbjct: 290 SFGLRQAREGEAFIGLDGRELSLVARAQVVTCHDLPIALAGVMGSKASGVTAATGRIWLE 349 Query: 335 VALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA 394 A++ P + + +++G+ TD+ RFE+G+ + + + L+ L A + + Sbjct: 350 SAMFSPAAVRTTARSVGLRTDASARFEKGLPKEMTLACSIRALELLKELFPCEAKGLWVC 409 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDS-----------LRILERLGFSVIGEYDKFE 443 + ++ + + +L G PIED + L LG + + + Sbjct: 410 GDSAADASSVLLRRNALHQLLG---PIEDEEGSSDLADAVVEQCLTALGSELSPSDEGWN 466 Query: 444 V-SVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRV 501 V + PS R D+ + DL+EE+ R+ G D+ + P PL L+ Q R ++ + Sbjct: 467 VIAPPSRRLDLAREIDLIEEVARLVGFDRFGAHLPDPLA----PGALTPAQQAERRLRTL 522 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + E+ S +S S + I NP+ A+ S++RT+L L RN+ Sbjct: 523 FCGAGLQEITTLSLVSASDS------DPRIAISNPLLAETSHLRTNLWEEHLAVCVRNLK 576 Query: 562 RAIADFAIFEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 + IFE+ Y D E + + S I G RL + + D + Sbjct: 577 ASQPGCWIFELGTTYAGSADAVEESRLL-------SGVICGEQRLERWTTSGKPAPPDYY 629 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 A+ V++ LD S HPGR+ + LG FG+ HP + Sbjct: 630 AARGRLTEVMQAL-KLDVSDRRLTDDSRLHPGRAATLVLEGR-PLGCFGQLHPELAASQN 687 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIK 738 L FE+ L + S +R + P +RDLA +VD+ A L+ I+ Sbjct: 688 LPEATFLFELDLTRLVESATRRNRWVPAFKAFPTVPASERDLAVVVDRSQAASDLMQSIR 747 Query: 739 NVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + L++ VT+ D F+G LGE K S A ++ + +T DD ++ + D++ +VK+ Sbjct: 748 KAGKPLLEAVTLIDRFEGDQLGENKASQAFRLRYRHQSETLTDDQVQPVHDKVRNALVKQ 807 Query: 798 TNAVLRS 804 A LRS Sbjct: 808 HGAELRS 814 >gi|319440345|ref|ZP_07989501.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium variabile DSM 44702] Length = 858 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 233/857 (27%), Positives = 380/857 (44%), Gaps = 98/857 (11%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + WL L T + E++ +G E E ++ E+ +V S E Sbjct: 1 MLISQDWLTRLLRTSNASFSATSEEMDAGFVRVGFETEGYEHIAESTGAIVFGRVESFEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D ++Q ++CGA N R G + + + PG+ +P + RK Sbjct: 61 LEGFKKPIRYCEVNVGDANGSGDLQHIICGARNFRQGDIVIVSLPGAVLP-GGFEIAARK 119 Query: 109 IRGIESTGMMCSEKELMLSD-DSASIMELPIDAP------VGGRLSDYLELSDPIIDVSL 161 G S GMMCS EL L+ +A I+ L +G +L L D + +V++ Sbjct: 120 TYGKVSEGMMCSAAELGLASVQTAGIIALRGKEAEDSRIVIGEDARGFLGLDDTVFEVNV 179 Query: 162 TPNRSDCIGVRGIALDLVAA-GLGKL------------KEINISCPLSSESIPLEIKFDL 208 TP+R + RG+A +L A+ GL ++ P + ++ L + Sbjct: 180 TPDRGYALSARGLARELAASFGLSFRDPATDPAAAALPTDLLAGLPSAGDASNLP-AITV 238 Query: 209 DDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 D + F + V G+ V +P WM++ L G R ++A D+TNYV G P H F Sbjct: 239 DPETKASRFGIRRVSGIDPTVESPYWMQRELLLAGQRPVNAATDVTNYVMFLLGQPMHAF 298 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 DA +I+ L V A GEK+ LD+ E LS ++VVI+ IQS+AG++GG + Sbjct: 299 DAGKITGDLHVHLATEGEKLTTLDDVERTLSGEDVVISDATGIQSMAGVMGGSTSEISAE 358 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TTDV E A +D I +AR+ + + +++ RFERG D + L V+L+ + GGT Sbjct: 359 TTDVYFEAAHFDQITVARTSRRHKLSSEASRRFERGADPAAIEAALDFAVALLTRIAGGT 418 Query: 388 -ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD---- 440 + I + P I S R++G P ++ L +G V GE D Sbjct: 419 VVPGVSIVGEVPAMP-TIAMHTSAPGRMAGTIYPSGTTVGRLTEVGCKVTPTGERDANGA 477 Query: 441 -KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 EV P+WR D+ A+LVEE+LR+ G+D+I P + R L+ +Q R V Sbjct: 478 MAIEVVPPTWRPDLTMPAELVEEVLRLEGLDKI---PSVIPTAPAGRGLTPRQKMRRAVG 534 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFG---GGQRE--LEILNPISADMSNMRTSLLPGLLK 554 LA E++ FI + ++G G R + +LNP+ +D + + T+LLP ++ Sbjct: 535 HALAWNGWFEILPSPFIPNDTFDVWGLDAGDPRRSAIRVLNPLESDAATIGTTLLPSMID 594 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEG-------------------------QKYMAA 589 + RN+ R D +F V V G Q A Sbjct: 595 SLRRNITRGQKDLGLFGVEQVTLPTEASGTSPMPSTAGRPSDEEVAELLASLPDQPLHVA 654 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWY 648 I G ++G+ W D F +A+ +I ++ +LR P + Sbjct: 655 VIAAGDRELQGT---WGPAQPYTA--ADAF----EAVRIIARAAGVEFTLRNAEYLP--W 703 Query: 649 HPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 HPGR + AE+V+G+ GE HP + + L E+ LD +P+ + Sbjct: 704 HPGRCAEVLVEVDGAEVVVGHAGELHPQVCERADLPKRTIAVELNLDGLPLEESFPRPV- 762 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 LS + +D+A +VD+ PA + ++ L++ + +FD + ++LGEGK+S Sbjct: 763 ----LSPFPALYQDVAVVVDETTPAADVEAALVSGAGELLEAIRLFDEYHAEALGEGKRS 818 Query: 765 VAIQVLIQPLKDTFRDD 781 + + + T +D Sbjct: 819 LTYSLRFRATDRTLTED 835 >gi|254432599|ref|ZP_05046302.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] gi|197627052|gb|EDY39611.1| phenylalanyl-tRNA synthetase, beta subunit [Cyanobium sp. PCC 7001] Length = 815 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 221/850 (26%), Positives = 400/850 (47%), Gaps = 81/850 (9%) Query: 1 MKFTLSWLKDHLDTDVSLE-------KICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE 53 M+ +L WL++ + + + + L+ G EVE +D+ A + +V ++ E Sbjct: 1 MRVSLQWLRELVGGPAAASGSWPETADLAERLSIAGFEVEAIDDLAAQADGVVVGLVK-E 59 Query: 54 RNPDLDC---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR 110 R P D ++ ++D G +Q+VCGA NVR G+ A G+ +P ++ + +R Sbjct: 60 RAPHPDADKLSVCQVDVGATDTLQIVCGAANVRQGIHVPVALVGTRLPAVDLTIKPATLR 119 Query: 111 GIESTGMMCSEKELMLSDDSASIMEL----PIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 G+ S+GM+CS EL L + SA I L + P G + L L D ++++++T NR Sbjct: 120 GVASSGMICSLSELGLEEGSAGIAVLDDLLELVPPPGTPVGPSLGLDDTVLELAITANRP 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--FAMCCVKG 224 D + ++G+A + VAA LG LK + P + + PL + D ++ +G F++ ++G Sbjct: 180 DGLSMQGMARE-VAALLG-LKTTLAAVPQACHAEPLVVAA-ADRQTMERGGLFSLTALEG 236 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV--------- 275 VR +P W++QRL+ G+R I+ +VDITN V L+ G P H FD R++ + Sbjct: 237 VRVAPSPRWLQQRLQKAGIRPINNVVDITNLVMLETGQPLHAFDRDRVAALGGGNPDPGG 296 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + +R+A GE++ LD +E L + +V+ R ++AG++GG+ D T + +E Sbjct: 297 IGLRQARPGERLTTLDKEERQLDAEALVVTYQDRPIALAGLMGGQGEAVDAGTGAIWLEA 356 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A++ P ++ RS +++G+ T++ RFE+G+ + + L+ L G + + Sbjct: 357 AVFAPRDVRRSARSVGLRTEASSRFEKGLPAESTLVASDRACQLLQELTGAEVQGRWVHQ 416 Query: 396 NITYKPRKIVFMNSEVKRLSGI--------DVPIEDSLRILERLGFSVIGEYDKFEVSVP 447 P +I + + G D+ + + LE LG S+ + ++V VP Sbjct: 417 RPGKPPERIPLRRDALHNMLGPVLGEQGPEDLDDDRIGQTLEALGCSLEESGEGWQVQVP 476 Query: 448 SWRQ-DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 R D++ + DL+EE+ R+ G D+ P P+ + L Q R ++R L + Sbjct: 477 PSRATDLQREVDLIEEVARLVGYDRFACHLPDPV----EPGGLDPSQQAERRLRRALCAA 532 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 + E+ + S +++ + L + NP+ AD ++R L LL A RN+ Sbjct: 533 GLQELCSLSLVAEAEG--------RLPLANPLLADYGHLRDELHSELLAAARRNLQCGQP 584 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA-- 623 F FE+ V++ + Q+ + I G R S + + D F A+ Sbjct: 585 GFWGFEIGAVFDGAGSQSQQLVGV--------ICGENRSERWTSSGKPQAPDYFRARGVL 636 Query: 624 -DALSVI------EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 AL+ + P D L HPGR I LG+FG+ HP + Sbjct: 637 QQALAALRIPSEDRPLTGNDLL----------HPGRGCQIVVEGR-PLGWFGQLHPATAE 685 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH-LSSLHPVKRDLAFIVDQHIPAGTLVN 735 L F++ L + + + + + ++ +RDLA +V + A L+ Sbjct: 686 GQELPTATYLFQLQLPPLLTAATRPNRWQPAFRSFPTVPSAERDLALVVPVNTLAADLLQ 745 Query: 736 IIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 +I+ + L++ V + D ++G LGE + S A ++ + + T D D+ + RI + Sbjct: 746 VIRKAGKPLLEHVELVDRYEGDQLGERECSQAFRLRYRDPERTLTDSDLEMAHGRIQAAL 805 Query: 795 VKKTNAVLRS 804 ++ A LRS Sbjct: 806 EQQLGAKLRS 815 >gi|255348848|ref|ZP_05380855.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis 70] gi|255503388|ref|ZP_05381778.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis 70s] gi|255507066|ref|ZP_05382705.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis D(s)2923] gi|289525519|emb|CBJ14997.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis Sweden2] gi|296435076|gb|ADH17254.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis E/150] gi|296438796|gb|ADH20949.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis E/11023] Length = 790 Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 214/815 (26%), Positives = 372/815 (45%), Gaps = 50/815 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD + Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 + I E Q++CGAPN R G++ A PG+ + + + KIRG+ES G Sbjct: 61 RLTVAIVFDGKGERQIICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L I E P D P+G S + L+ ++ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQKAERGIFEFPADTPLGE--SACMLLAGASLECSLTPNLGHCTSLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRNNVAPN 232 +A ++ +NI S S+P E D+ D+ C F + G+ +P Sbjct: 179 LAREI---SFLSPVSLNIPEEFSFASLPQETSICDMHDAGACPVFYSVKILGLSCRRSPE 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 +++ L A+G + ++A+VDITNYV L G P H +D+ + + L L N Sbjct: 236 YLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQPLTLLN 295 Query: 293 QE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE Y L ++V+A I +AG++G + C +NTT++++E A + P + + + + Sbjct: 296 QETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKYQRTIQ 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIVFMNSE 410 + T++ YRF RGVD QG++P L + +I SL S I + ++ P + Sbjct: 356 LHTEAAYRFTRGVDPQGVLPALHAAIHMIQSLFPDAQISPIQKIGDDSFSPLSLSVRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 416 IKRLLDIELSTAEIVAKLSSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 Q + LP + S R + LA+ + + S + E S L Sbjct: 476 QKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTCSLLDTEVSSLSLQESSL 527 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 528 I----PVQNSSWKLRDSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQEEERVA 583 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSWYH 649 I ++ S W K+ + + K ++ + S++ + +H Sbjct: 584 ILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQHPNFH 635 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 P + + + LG FG HP + + + + E+ L+ + +S KK++ V + Sbjct: 636 PYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGPHYVPY 693 Query: 710 LSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ K+V++ Sbjct: 694 --PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQSKNVSL 751 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +++ FRD + R L + +E ++ A+L Sbjct: 752 RMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|312195573|ref|YP_004015634.1| phenylalanyl-tRNA synthetase subunit beta [Frankia sp. EuI1c] gi|311226909|gb|ADP79764.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia sp. EuI1c] Length = 838 Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 196/600 (32%), Positives = 303/600 (50%), Gaps = 29/600 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE----RNP 56 M +SWL++ + + D L G EVE ++ L + +VL++E + Sbjct: 1 MLILMSWLREQVPGLPPAGAVADALIRAGFEVEGLEAVGGLGGVVVGEVLAIEEVAAKKK 60 Query: 57 DLDCAILRIDTGKHQEIQ-----VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRG 111 + +R+ + + +VCGA N VG A PG+ +P + RK G Sbjct: 61 SVRWCQVRVTEAVAGDPESGVRGIVCGAFNFEVGDRVAVALPGAMLP-GGFEITARKTYG 119 Query: 112 IESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 S GM+CSE+EL +SD I+ LP DAP+G +++ L+L+D ++D+S+TP+R + V Sbjct: 120 HVSDGMICSERELGISDAHEGILVLPPDAPLGAHVAELLDLADDVLDISVTPDRGYGLSV 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV-RNNVA 230 RGIA + AA L + P ++ + ++D++ C + + GV V Sbjct: 180 RGIARE--AATAFGLPFDDPGAPTAAVTAGDGYPVTVEDTAACDRYVARVITGVDPAAVT 237 Query: 231 P-NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P W R RL G+R ISA VD+TN V L G P H FD + ++ + VRRA +GE++L Sbjct: 238 PLRWAR-RLTLSGMRPISAAVDVTNAVMLGLGQPLHAFDKATLTGAIVVRRARAGERLLT 296 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 LD + L P+++VIA D ++AG++GG TT++++E A +DP+ +AR+ + Sbjct: 297 LDGVDRALDPEDLVIADDSGPIALAGVMGGASTEISAATTEIVLEAAHFDPLAVARTARR 356 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 + +++ RFERGVD + + L L GG + + P + F S Sbjct: 357 HRLFSEASRRFERGVDPALAPAAAQEAIRLFGELAGGQPAPGTTDVDNRPAPVTVRFPLS 416 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE------VSVPSWRQDVEEKADLVEEI 463 E RL G P E L +G +V D V+ PSWRQD+ ADLVEE+ Sbjct: 417 EPTRLGGRLYPDEVVRTRLADVGCAVEPAGDAPADDGVVVVTPPSWRQDLTRPADLVEEV 476 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK--EQS 521 +R+ G D I P+ L ++ R LS Q TR + R LA + EV+ F+ + Sbjct: 477 MRLEGFDTI---PVTLPRLPAGRGLSESQRLTRAIARSLAYEGLTEVMTLPFVGAGVADA 533 Query: 522 VLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + G R + I NPI+ D + +RTSLLPGL A RN+ R AD A+FE+ V+ Sbjct: 534 LDLPAGDRRRAAVRIANPIAEDAAYLRTSLLPGLFDAAVRNLGRGQADLALFEIGQVFRE 593 Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 3/158 (1%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR + E+ G+ GE HP ++ L FE+ D + I+ R Sbjct: 683 WHPGRCAALHVDGELA-GHAGELHPRVIANLDLPARTVAFELSPDVL-IAAALRHGAAPA 740 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S P RD+A +VD P + +++ L++ +T+FDVF+G +G G++S+A Sbjct: 741 PVVSQYPPADRDVALVVDAATPVADVSTALRDGAGDLLESLTLFDVFEGAQVGAGRRSLA 800 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + ++ T D+ + D V ++T A LR+ Sbjct: 801 FGLRLRATDRTLTADEANGVRDAAVAEAARRTGAALRA 838 >gi|124025718|ref|YP_001014834.1| phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. NATL1A] gi|123960786|gb|ABM75569.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. NATL1A] Length = 824 Score = 261 bits (667), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 226/856 (26%), Positives = 414/856 (48%), Gaps = 84/856 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK ++SWLKD ++ + ++++ + L+ G EVE +++ E I V + +P+ + Sbjct: 1 MKVSVSWLKDLVEFNNDIDELSEKLSMTGFEVESLEDISEQAKNVVIGFVEEITPHPNAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +++ +VCGAPNV+ G + A G+ + ++ + + +RG+ES GM+ Sbjct: 61 KLKVCSVDVGLPKKLSIVCGAPNVKAGFHVLVAKVGAYLSSKSLKIKLSNLRGVESEGMI 120 Query: 119 CSEKELML--SDDSASIME-----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS +EL + S++ I+E +P P+G DYL L+D II++++T NR D + + Sbjct: 121 CSLEELGIESSNEGIEILEENEATIP---PIGTNAVDYLCLNDTIIELAITANRPDGMSM 177 Query: 172 RGIALDLVAAGLGKL--------KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 GIA ++ KL ++ NI P S+ + + C +++ + Sbjct: 178 VGIAREISTITNSKLTLPTLNYNEDFNIFEPKISDKETIGVD--------CI-YSITYID 228 Query: 224 GVRNNVAPNW-MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT----- 277 + N N + +L ++ I+ +VDITNY+ L++G P H FDA + +++ Sbjct: 229 SIDNTGKTNKNIFNKLSSLKQNCINPVVDITNYLMLEQGQPLHAFDADLLDNIIGRKVIP 288 Query: 278 ----VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 +R GE +ALD +EY ++P +I D +IAG+IGG ++ D TT + + Sbjct: 289 NDFGIRNGKEGELFVALDKKEYKINPTIKLITCDDIPIAIAGVIGGNNSSVSDKTTRIWL 348 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A++ P +I S + +G+ TD+ R+E+G+ V K LI GG +I Sbjct: 349 EAAVFTPTSIRNSSREIGLRTDASSRYEKGISSNMTTAVSKRASDLISVQLGG--DNISS 406 Query: 394 ARNITYKPRKIVF------MNSEVKRLSGIDVPI------------EDSLR-ILERLGFS 434 N +K + I +NS + +LS D I ED + +L +LG Sbjct: 407 YVNTDFKKKSISVNLRMDKINSVLGKLSSSDSNIVNNNSTKLRYLNEDEIETLLSKLGLI 466 Query: 435 VIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQ 492 + + V VP +R D+ + DL+EEI R+ G D S P PL + LS + Sbjct: 467 LTSNNSGWNVQVPPYRSSDLTREIDLIEEIARLIGYDNFDSNMPDPL----EPGVLSPTK 522 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGL 552 R ++ EVV S + E + + I NP+ ++ S +RT++ Sbjct: 523 LVERRLRNSFIHNGFQEVVTSSLVGPENT-----DDNAVLIKNPLLSETSRLRTNVWDEH 577 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL--WSDKSE 610 LK RNV IFE++ Y+ D + ++ + G+ + GS RL W S+ Sbjct: 578 LKILQRNVSFGAEGCWIFEIAKTYKKDK---ECFVETNLLSGA--LTGSKRLSKWGGASK 632 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 + +D F+A+ ++ + ++++ + + HPGR+ + + + G+FG+ Sbjct: 633 QLT--LDYFEARGKLKQSLD-VLGVETIDKQLTDKDFMHPGRTSELFVEGKSI-GFFGQI 688 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIP 729 HP++ + F L F + DS+ + ++T ++ P ++RD+A I + Sbjct: 689 HPSLSEKFDLIKETYLFNLDFDSLIKAATRKTNWTRIYKDYPTVPYMERDIALIHSKKYS 748 Query: 730 AGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + ++ +IK R L++ V + D ++G S+ E S A ++ + K T ++DI + + Sbjct: 749 SLEIMGLIKKTGRPLLEKVELIDRYEGSSMPEDAISQAFRIRYRDAKKTLVEEDINPIHE 808 Query: 789 RIVENVVKKTNAVLRS 804 +I + +K A LRS Sbjct: 809 KIRNALKEKIKAELRS 824 >gi|157413357|ref|YP_001484223.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9215] gi|157387932|gb|ABV50637.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9215] Length = 814 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 229/864 (26%), Positives = 422/864 (48%), Gaps = 110/864 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MK + +WLK+ ++ + E + + L+ G EVE + D + ++ + KV+SV ++ D Sbjct: 1 MKVSQNWLKNLVEITSTPEDLSEKLSIGGFEVESLEDCSKNVNGVVLGKVISVLKHEGSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q++CGA N++ + A G+ + ++ + +IRG+ S GM+ Sbjct: 61 KLSICQVDIGNSKNLQIICGARNIKPNIYVYVATVGTKLNAVDLTIKRSEIRGVMSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +E+ L D S I +L + +G SD L+L+D I D+++T NR D + V GI Sbjct: 121 CSLQEMGLEDSSEGIEIIDEDLALKHELGTPGSDLLQLNDFIYDLAITANRPDGMSVIGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC-------------C 221 A ++ A L E + P L K+++ L KG +C C Sbjct: 181 AREISA-----LLESTLYFP------ELNHKYNI---QLLKGIKLCQEAIESNCIYTISC 226 Query: 222 VKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL---- 276 + GV ++PNW++ R++ G++SI+ LVD+TNY+ L++G P H FD ++++++ Sbjct: 227 IDGVNGEKLSPNWLKDRIEKSGIKSINLLVDLTNYILLEQGQPLHAFDKEKLTNLIGKKV 286 Query: 277 -----TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +VR+ E +L LD +EY L+ + VI + +IAG+IGG + T+ + Sbjct: 287 SPDDFSVRKGKDNESLLCLDGKEYGLNDNITVITCCDKPVAIAGVIGGLETSVTNTTSSI 346 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-------- 383 +E A+++P+ I +S K +GI T+S R+E+G+ + I + ++L+ Sbjct: 347 YLEGAVFNPVTIRKSSKEVGIRTESSSRYEKGISSKNTINAVTRAINLLEEYFSINSPII 406 Query: 384 -CGGTASD----ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE 438 SD I + RN +K + + + ++ + D I D L + +G ++ + Sbjct: 407 NTSNLISDEDIFIKLRRNRIHKILGPLIIKDQFEKRNLSDNEIVDKLTL---IGCTLKNK 463 Query: 439 YDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTR 496 ++V+V P+ D+ + DL+EEI R+ G D+ + P P+ + LS +Q R Sbjct: 464 EYGWDVAVIPNRSHDLIREIDLIEEIARLIGYDRFDLKLPNPIKPGK----LSSEQLALR 519 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 VK EV+++S + ++ L ++I NP+ + S +R ++ L+ Sbjct: 520 KVKNSFIENGFNEVLSYSLVPEDDEKL-------IKISNPLLLETSCLRDNIWKEHLEIV 572 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 RN+ A IFE+ +V++ +T Q+ + G+ I G+ + + R + + Sbjct: 573 NRNIKAGQASCYIFEIGNVFQKNTEFIQEEVLNGV------IYGNKKFGKWINSGRDKDL 626 Query: 617 DLFDAKA---DALSVI------EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 + F+A+ +ALS + +P S+D L HPGR+ + + GYF Sbjct: 627 NYFEARGKLKEALSSLNIKIDDKPTDSIDFL----------HPGRTAKLVIEGKDA-GYF 675 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQ--KKRTKTKKVVHLSSLHPV----KRDLA 721 GE HP +L +VYL +I +S+ T+ K V + +P+ +RD+ Sbjct: 676 GEIHPKLLLEKKSL-----KKVYLFNINVSKLLGASTRKNKWVPIYKQYPIVPKMERDIN 730 Query: 722 FIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 F+ + + + I+ + L++DV + DVF+ G+ S ++ + T D Sbjct: 731 FVFSKKFLISEITSKIRKTGKNLLEDVNLLDVFEDSKFGDDHISYTFRLSYRDKDKTLLD 790 Query: 781 DDIRILMDRIVENVVKKTNAVLRS 804 DI + I+ NV K N LR+ Sbjct: 791 SDITSIHSNIISNVEKCFNTKLRN 814 >gi|226227280|ref|YP_002761386.1| phenylalanyl-tRNA synthetase beta chain [Gemmatimonas aurantiaca T-27] gi|226090471|dbj|BAH38916.1| phenylalanyl-tRNA synthetase beta chain [Gemmatimonas aurantiaca T-27] Length = 812 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 230/840 (27%), Positives = 392/840 (46%), Gaps = 63/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + W+K + +S E++ + L+ + ++ + A LS F + +V+ R+P+ + Sbjct: 1 MIVSHEWIKQFVPHTLSAEQVGEALSRHCVTLDGITTLGAELSAFVVAQVVEAGRHPNSE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + ++VVCGAPNV G +A G+ +P + + RKIRG S GM+ Sbjct: 61 RLWVTKVDDGSGELLEVVCGAPNVVAGHKYPFARTGTVMP-GGLKIEKRKIRGETSNGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS +EL L ++ I+ L DA G L + ++L D +D+ + PNR D + G+A ++ Sbjct: 120 CSARELGLGEEHDGILTLDTDAAPGTALLEIIKLGDARLDLDVLPNRPDLLSHVGVAREV 179 Query: 179 VAAGLGKLKEINISCPLSSESIP-LEIKFD---------LDDSSLCKGFAMCCVKGVRNN 228 A L + + ++ +E K +DD+ C F ++GV+ Sbjct: 180 SAISGTPLSTVPAELTTAVSTLAAVEGKTAARGQLASVIVDDAESCPRFVGVVIQGVQVG 239 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P W+RQRL+++GLRSIS +VD TNYV G+P H +D + D +TVR + E Sbjct: 240 ASPAWLRQRLESIGLRSISNVVDATNYVLHGLGHPVHAYDLGTLKDRTITVRPTRADETS 299 Query: 288 LA-LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 L LD ++ VI R AG++GG + TTDVL+E+A++D + R Sbjct: 300 LTTLDGVSRVVAAGTTVICDGERPIGFAGVMGGLDTEVTERTTDVLLELAVFDARFVRRV 359 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + + + TD+ YRFERGVD Q V + +LI + GGT +++ + + Sbjct: 360 RRAVALSTDASYRFERGVDAQDAEIVARRAAALITQVAGGTVAEVLVVGEAPAARGAVTL 419 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + RL G+DV + +R LE LG V D V P WR D+ + DL+EE+ R+ Sbjct: 420 RPSRLARLLGVDVSTAEIVRRLESLGCVVQPLGDALLVQAPGWRHDLGLEVDLIEEVARL 479 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G D + E P + + + L + +R V+ VL M E F S G Sbjct: 480 VGFDALPDELRPF-RPGNAPDHPLHLA-SRRVRDVLVGIGMAEARPMPFTST-------G 530 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + NP++ D +R S+L L + N+ R + +FE+ +V+ TP + Sbjct: 531 DEHTPRVRNPLADDEPFLRASVLDTLARRAEYNLSRMQGNLRLFEIGNVF---TPRDGRL 587 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESG 643 R G+ + R + SE D +DAK A + P ++ SL+ G Sbjct: 588 PIEETRVGA--LLMGARRPAHFSEPEPPAFDAWDAKELGARVATAAFPGRAV-SLQPADG 644 Query: 644 APSWYHPGRSGIIKTSAEIV--LGYFGEFHPNILDFFGLSNPICGFEVYLDSI------- 694 A W A +V +G G+ LD + G EV L + Sbjct: 645 ALEW------------AIVVDDVGTVGQVSAVPLDRPLWATEAWGVEVTLGVVSSDDVAG 692 Query: 695 -------PISQKK-RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLID 745 P ++ T+ + L + + D+A +V + A T+ ++ + L++ Sbjct: 693 ANQHAHTPAERESGATRAVRFAPLPTTPAAEFDMALLVPDAVTAATVQEVLRRTAGELLE 752 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 VT+FD F+G + +G +S+ ++ + + T RD ++ R++E + K+ R+S Sbjct: 753 QVTLFDEFRGPGVPDGTRSLGWRLTWRHPERTLRDKELEGRRARLLEVLDKELGIRPRAS 812 >gi|317153725|ref|YP_004121773.1| phenylalanyl-tRNA synthetase subunit beta [Desulfovibrio aespoeensis Aspo-2] gi|316943976|gb|ADU63027.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio aespoeensis Aspo-2] Length = 802 Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 186/598 (31%), Positives = 302/598 (50%), Gaps = 31/598 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSV----ERNP 56 M+ +L WL++ + + + + D LT +GLE++ +++ PF VK L V ER+P Sbjct: 1 MRVSLDWLREFVPYEGEPQALGDRLTMLGLELDGIED-----PFESVKDLVVGHVVERSP 55 Query: 57 DLDC---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 + ++ R+D G + + +VCGAPNV G A G +P + + + K+RG++ Sbjct: 56 HPEADKLSVCRVDVGD-EVLDIVCGAPNVAAGQKVPVAKVGVTMP-DGLKIKKAKLRGVK 113 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S GM+CSE+EL SDD I L G RL D L L + D +TPNR+DC+ + G Sbjct: 114 SNGMICSERELGFSDDHEGIWVLDDVLVPGARLVDALNLERVVFDFDITPNRADCLSILG 173 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A + A L + + + E++ +DD LC + ++GV+ P+W Sbjct: 174 FARETALAFDLPLTLPALDLKEAGGNAADEVRIVIDDPELCPLYNARVIRGVKTRKGPDW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDN 292 MR RL A+G R IS +VD TNY+ + G P H FD RI + V A G + LD Sbjct: 234 MRFRLLALGQRPISNIVDCTNYIMFELGQPLHAFDFDRIEGATIRVAPASDGMRFTTLDG 293 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ +++I + ++AG++GG ++ ++ +VL+E A++ P I ++ + L + Sbjct: 294 HERTLTAADLLIWDGAKPVALAGVMGGLNSEMGGDSANVLLEAAIFRPGTIRKTARRLAL 353 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT-ASDICIARNITYKPRKIVFMNSEV 411 +D+ YRFERGVD L L+ GGT + + A ++ R + + Sbjct: 354 PSDASYRFERGVDQVMNRFCLDRAAQLMAETSGGTVVAGVASAEPRPWRDRVHTYRHERC 413 Query: 412 KRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 RL G+D+ + ++ G V + + VS PS R D+E + DL EE+ R+YG+D Sbjct: 414 MRLLGLDLEPAFAKKVFVLEGCGVDDSDPANWTVSSPSHRLDLEREVDLYEEVGRVYGLD 473 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQSVLFG 525 +I P L +V + ++ + T Y +K A + E +N+SF+ + G Sbjct: 474 RI---PAVLPRVAKSLDGTV-TAETEYGFIGRIKTWGAGVGLNEAINYSFVGADDLDRLG 529 Query: 526 ---GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 GG+ + I NP+S D S MRT L PGLL N+ + +FEV+ + D Sbjct: 530 LPAGGR--VFIANPLSEDQSVMRTDLAPGLLNTLKHNLAKGNTHIRVFEVAKRFVADA 585 >gi|260654998|ref|ZP_05860486.1| phenylalanyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] gi|260630313|gb|EEX48507.1| phenylalanyl-tRNA synthetase, beta subunit [Jonquetella anthropi E3_33 E1] Length = 796 Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 233/838 (27%), Positives = 387/838 (46%), Gaps = 77/838 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + +WL+ + ++++ D LT G EVE + +S I KVL + +P Sbjct: 1 MLLSWNWLQQFVSIPAPIDQVADRLTVTGSEVESLTQVSPKVSGLRIAKVLETKVHPTKS 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + V A NV G + +AP GS I + M + R G S GMM Sbjct: 61 GLTVTTLDLGNGERRPCVTAAKNVTAGCIVSYAPSGSTI-ADGMTLGFRDFDGFTSDGMM 119 Query: 119 CSEKELMLSDDSA--SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S EL L + S I+ LP DAP+G L +L L D +ID+S+TPNR D + G A Sbjct: 120 VSAAELGLPELSPVHGILLLPDDAPIGADLKTWLGLDDWVIDLSITPNRGDMLSYLGTAR 179 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFD--LDDSSLCKGFAMCCVKGVRNNVAPNWM 234 ++ A G + P + ++F+ + C + + V+ +P Sbjct: 180 EIAALIPGASLHLPELRPALQQPGDWSVQFNGVTLEGDGCMAYRLGAADSVKVAASPLEW 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 RL G+R ++ +VD TN L G P H FDA+ + + +TVR A GE +++LD++ Sbjct: 240 GVRLCLSGMRPVNNVVDATNIAMLALGQPLHAFDAASLPAPEITVRPARPGETMMSLDHK 299 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E LS ++VI+S G +AG++GG+++ ++T VL+E A + I+R+ + LGI Sbjct: 300 ERVLSDGDLVISSGGVAVGLAGVMGGQNSEVTESTGAVLIESACFSAPAISRTSRRLGIP 359 Query: 354 TDSRYRFERGVDLQGMIPVLKHI----VSLILSLCGGT--ASDICIARNITYKPRKIVFM 407 +++ +R+ RGVD P L + V +LS G + ++PR++ Sbjct: 360 SEAAFRYARGVD-----PCLTELSLSWVKALLSQWGAARVYEKEIFCQKKPFEPRRVFLT 414 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRI 466 + L+ + + L RLG E + E VPSWR D+ + DL+EE+ RI Sbjct: 415 ERKTALLTAQPDLAKTAQETLTRLGLVPSAESAEGTEYVVPSWRNDLSIEEDLIEEVARI 474 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLF 524 +G + + ++ L S R ++ +R E + +SFIS + Q + + Sbjct: 475 HGYQDSRPR---IPELYGPGQLGEFMSLHRQIREAAMARGYSEAITYSFISPDWLQKIDY 531 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVY------- 576 + NPISAD+S MR ++LP LL A + R D +FE + Sbjct: 532 PEIDSCKTLTNPISADLSVMRPAILPSLLAAVSKAEKRGWRDEIRLFECGKAFVPSPDGT 591 Query: 577 -ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 E D G Y A R RL+ ++ E D F KAD ++++ VS Sbjct: 592 VEFDRLCGVVYAGAERR----------RLYGARTAE-----DFFSVKADLMALL---VS- 632 Query: 636 DSLR--FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +R F + W H G++ + + GY + P+I + LS P+ FE+ D Sbjct: 633 RGIRGTFIPASLPWGHAGQTAQVLLDGKPA-GYLAQLKPSISSAWDLSAPLFFFEI--DL 689 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDV 752 P+++ + K+ PV RD+A + D+ + + + I + + ++ V +FD+ Sbjct: 690 APLARPFKPCYKQS---GDFPPVYRDIALLADRGASSEAIASEILELGKPVLRSVKLFDL 746 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN-------VVKKTNAVLR 803 + G+ + E KKS+A + +R DD R + D VE+ ++K VLR Sbjct: 747 YCGQGIPEDKKSLAFSM-------AYRLDD-RTMTDAEVESRHSALRQALEKKGYVLR 796 >gi|72382178|ref|YP_291533.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. NATL2A] gi|91208128|sp|Q46KZ8|SYFB_PROMT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|72002028|gb|AAZ57830.1| phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. NATL2A] Length = 824 Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 224/856 (26%), Positives = 413/856 (48%), Gaps = 84/856 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK ++SWLKD ++ + ++++ + L+ G EVE +++ E I V + +P+ + Sbjct: 1 MKVSVSWLKDLVEFNNDIDELSEKLSMTGFEVESLEDLSEQAKNVVIGFVEEITPHPNAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +++ +VCGAPNV+ G + A G+ + ++ + + +RG+ES GM+ Sbjct: 61 KLKVCSVDVGLPKKLSIVCGAPNVKAGFHVLVAKVGAYLSSKSLKIKLSNLRGVESEGMI 120 Query: 119 CSEKELML--SDDSASIME-----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 CS +EL + S++ I+E +P P+G DYL L+D II++++T NR D + + Sbjct: 121 CSLEELGIESSNEGIEILEENEANIP---PIGSNAVDYLCLNDTIIELAITANRPDGMSM 177 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--------FAMCCVK 223 GIA ++ KL N++ +E F++ + +C +++ + Sbjct: 178 VGIAREISTITNSKLTLPNLNY--------IE-DFNIFEPKICDKETIGVDCIYSITYID 228 Query: 224 GVRNNVAPNW-MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT----- 277 + N N + +L ++ I+ +VDITNY+ L++G P H FDA + +++ Sbjct: 229 SIDNTGKTNKNIFNKLSSLKQNCINPVVDITNYLMLEQGQPLHAFDADLLDNIIGRKVKP 288 Query: 278 ----VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 +R GE +ALD +EY ++P +I D +IAG+IGG ++ D TT + + Sbjct: 289 NDFGIRNGKQGELFVALDKKEYKINPTIKLITCDDIPIAIAGVIGGNNSSVSDKTTRIWL 348 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A++ P +I S + +G+ TD+ R+E+G+ V K LI GG +I Sbjct: 349 EAAVFTPTSIRNSSREIGLRTDASSRYEKGISSNMTTAVSKRASELISVQLGG--DNISS 406 Query: 394 ARNITYKPRKIVF------MNSEVKRLSGIDVPI------------EDSLR-ILERLGFS 434 N +K + I +NS + +LS D ED + +L +LG Sbjct: 407 YVNTDFKKKSISVNLRMDKINSVLGKLSSSDSNFVNNNSTKLRYLNEDEIETLLSKLGLI 466 Query: 435 VIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQ 492 + + V VP +R D+ + DL+EEI R+ G D S P PL + LS + Sbjct: 467 LTSNDSGWNVQVPPYRSSDLTREIDLIEEIARLIGYDNFDSNMPDPL----EPGVLSPTK 522 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGL 552 R ++ EVV S + E + + I NP+ ++ S +RT++ Sbjct: 523 LVERRLRNSFIHNGFQEVVTSSLVGPENT-----DDNAVLIKNPLLSETSRLRTNVWDEH 577 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL--WSDKSE 610 LK RNV IFE++ Y+ D + ++ + G+ + GS RL W S+ Sbjct: 578 LKILQRNVSFGAEGCWIFEIAKTYKKDK---ECFVETNLLSGA--LTGSKRLSKWGGASK 632 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 + +D F+A+ ++ + ++++ + + HPGR+ + + + G+FG+ Sbjct: 633 QLS--LDYFEARGKLKQSLD-VLGVETIDKQLAEKDFMHPGRTSELFVEGKSI-GFFGQI 688 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIP 729 HP+ + F L F + DS+ + ++T ++ P ++RD+A I + Sbjct: 689 HPSQSEKFDLIKETYLFNLDFDSLIKAATRKTNWTRIYKDYPTVPYMERDIALIHSKKYS 748 Query: 730 AGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + ++ +IK R L++ V + D ++G S+ E + S A ++ + K T + DI + + Sbjct: 749 SLEIMGLIKKTGRPLLEKVELIDRYEGSSMPEDEISQAFRIRYRDAKKTLVEKDINPIHE 808 Query: 789 RIVENVVKKTNAVLRS 804 +I + +K A LRS Sbjct: 809 KIRNALKEKIKAELRS 824 >gi|299143911|ref|ZP_07036991.1| phenylalanyl-tRNA synthetase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518396|gb|EFI42135.1| phenylalanyl-tRNA synthetase, beta subunit [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 793 Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 225/823 (27%), Positives = 403/823 (48%), Gaps = 49/823 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + WL+D+++ D ++ I D +T+ G VE ++NR E LS + K+ +E++PD + Sbjct: 1 MLLPVKWLRDYVNIDKDVKIIADEITATGSHVESIENRAENLSKVVVGKIEKIEKHPDAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + +Q+V GA NV G + A G+ + + ++ K+RG+ES GM+ Sbjct: 61 KLVVCSVNVGT-EILQIVTGAKNVYEGAVVPVALVGAHLS-GGVKISKGKLRGVESYGML 118 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS EL + S I P +G L+L II++ +TPNR DC+ + Sbjct: 119 CSLGELGYDNSVISKEAKDGIFLFPEGTEIGKSAISVLDLDKEIIEIEITPNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + A +L E I + I ++ C F +K V+ +P Sbjct: 179 GMARETAATFDMELSEPKIDILNEVDDIADYFNTVDIETENCDRFYARVLKNVKIETSPL 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILALD 291 W++ L + G+R I+ +VD+TN+V L+ G P H +D + D + VR+A +GE I LD Sbjct: 239 WLQNYLVSAGVRPINNIVDLTNFVMLEYGQPLHAYDLDDLQDKKIVVRQAKNGEVIKTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +++ L ++VIA R +AGI+GG + DNT +VL+E A +D +I ++ K L Sbjct: 299 DEDRLLEEKDIVIADGKRAIGLAGIMGGFDSEIKDNTVNVLLEGANFDADSIRKTSKRLQ 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY-KPRKIVFMNSE 410 + +++ RFE+G+D+ + + L + A+ + Y K R+I +N Sbjct: 359 LRSEASARFEKGIDINAPKIAVDRVCQLAEKI---NAAQVVKGSIDNYRKVREIADLNLR 415 Query: 411 VK---RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 V+ RL G ++ E+ +L RL + + +P++R D+E + DL+EE+ RIY Sbjct: 416 VEKCNRLIGFELNAEEIAGLLNRLQINTDINGEVITAHIPTFRLDIEIEEDLIEEVARIY 475 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ--SVLFG 525 G I +PL + R+ L+ R +K+VL S E + +SF+S ++ Sbjct: 476 GYHNIIPKPLEGSLTVGGRS-ELRNLEDR-IKKVLLSIGYSEFMTYSFVSPSNFDKLMLD 533 Query: 526 ---GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 ++ ++I+NP+ + S MRT+L+ +L+ +N R A FE + + P+ Sbjct: 534 ETDDKRKVVKIINPLGEEYSIMRTTLVSNMLEVLSKNEHRGNEYVAGFEFGNTF---IPQ 590 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G+ + K S G G + K R V + +L ++ Sbjct: 591 GEGLPREEL-KLSMGFYDMGDFYFLKESIRRALWQ---------------VGILNLEYKR 634 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 ++ HPGRS I + + G FGE HP + + L E+ + + + Sbjct: 635 ANINYLHPGRSAEIYVDGKYI-GVFGEVHPLVAKNYELKKKCYVAEIEFEKL---LENSI 690 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEG 761 + K L ++RDLA ++D+ I AG + I K+ +L+++ VFDV+ G+++ Sbjct: 691 ENYKFRELPKYPAMRRDLAVVIDRDIDAGEIELIARKHGKKLLEEFKVFDVYTGENIESR 750 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 KKS+A + + T D ++ ++ ++V+++ K+ A LR+ Sbjct: 751 KKSIAFSMTFRANDRTLVDKEVNDIVSKVVDDLSKEYGANLRA 793 >gi|162447120|ref|YP_001620252.1| phenylalanyl-tRNA synthetase subunit beta [Acholeplasma laidlawii PG-8A] gi|161985227|gb|ABX80876.1| phenylalanyl-tRNA synthetase beta chain [Acholeplasma laidlawii PG-8A] Length = 784 Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 216/794 (27%), Positives = 377/794 (47%), Gaps = 54/794 (6%) Query: 31 EVEKVDNREALSPFTIVKVLSVE---RNPDLDC-AILRIDTGKHQEIQVVCGAPNVRVGL 86 ++ +VD+ AL+ T + V VE ++P+ D + ++ G + + +VCGAPNVR G Sbjct: 25 QIIEVDDYLALNSSTKLVVGYVETCVKHPNADTLSKTTVNIGS-EVLDIVCGAPNVRSGQ 83 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA------SIMELPIDA 140 + A GS +P N + +RG S GM+CS KEL + I Sbjct: 84 YVIVAQVGSVLP-GNFEIKAAVVRGETSNGMICSLKELGFDEKHVPAQYKDGIYNFSQKV 142 Query: 141 PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI 200 G L L + + LTPNR D + G A DL + K+++I P E+ Sbjct: 143 TPGEDALKALGLDGMKLLLGLTPNRGDLLSHLGFAYDLASM---TNKKVHIPKPTFKEAA 199 Query: 201 PLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVS 257 K D+ D++ C + + + V +P W++ L +R I+ +VDITNY+ Sbjct: 200 H---KHDVQVVLDTNNCLTYDLRVMDVVIKE-SPWWLKNALIQSDIRPINNVVDITNYIL 255 Query: 258 LDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGI 316 + G P H FDA+++ S+ + VR+A GE+++ LD L P ++VI + ++ G+ Sbjct: 256 ITYGTPLHAFDANKVNSNTILVRQAHQGEEVVTLDEVSRVLEPSDIVITDGKKPIALGGV 315 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 +G +G DD+TT +++E A ++P IA++ K L + +DS RFERG+D + + L+ Sbjct: 316 MGLLESGIDDHTTKIMLEAAQFNPSVIAKTSKRLDLRSDSSLRFERGIDQKRVRIGLEAA 375 Query: 377 VSLILSLCGGTA-SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 L++ L S I N+ + + V L G + + IL +L + Sbjct: 376 TQLLVELADAKVYSGISSKTNVKEENPWVELSLENVNGLLGTKLNDNELHDILAQLNYET 435 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 + V P +R+D+ +AD++EE+LR+YG I+ + L + + LS Q Sbjct: 436 KIDNKTLLVQAPGYRKDILIEADVIEEVLRVYGYHHIEGKKLQPNLLGE---LSYSQKMN 492 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 R +K+ L + EV+N+S +S+ F + IL P+S D +R SL+PGLLK Sbjct: 493 RALKQTLVGLGLNEVINYSLVSESDIESFAKVGESVSILMPLSDDRKILRQSLIPGLLKN 552 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 ++ R ++ +FE+ HV+ D + K + +G L +R Sbjct: 553 LNYHLSRQMSHITLFEMGHVFAKD-----------VEKNHLAVLINGNLLDSNYLKRDIK 601 Query: 616 VDLFDAKADALSVIEPFVSLDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 D + K ++E ++ F +S + HPG G + ++++G G+ HP Sbjct: 602 SDFYTLKG----ILEHIGVTLNVSFDVKQSSNVAALHPGIQGDVYV-GDLLVGVIGKTHP 656 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAG 731 + + + + Y+ + +SQ TK + S +P ++RD++F+V + P Sbjct: 657 LTDEAYDIK------DAYVLELDLSQLITTKAPMIFESISKYPSIQRDISFVVSKDYPIS 710 Query: 732 TLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 ++ IIK R L+ ++ VFDV+ G ++ EG S+AI + + T D+ + I Sbjct: 711 DILGIIKQTARKLLTNIEVFDVYSGSNIEEGYHSLAISMTFNNKEKTLEKLDVEKALKSI 770 Query: 791 VENVVKKTNAVLRS 804 + AV R+ Sbjct: 771 QNRLEFNFKAVFRA 784 >gi|68535915|ref|YP_250620.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium jeikeium K411] gi|91208236|sp|Q4JW05|SYFB_CORJK RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|68263514|emb|CAI37002.1| phenylalanyl-tRNA synthetase beta chain [Corynebacterium jeikeium K411] Length = 852 Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 236/879 (26%), Positives = 401/879 (45%), Gaps = 102/879 (11%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVER 54 M + SWL L T VS E+ +G E E + E P I +V +E Sbjct: 1 MLISQSWLTRILQTSNPQWSVSAEEFDAGFVRVGFETEGYEAIPETTGPLVIGRVEKIEE 60 Query: 55 NPDLDCAILRIDTGKHQ-----EIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + I D Q E+Q ++CGA N G V A PG+ +P ++ RK Sbjct: 61 LTEFKKPIRYCDVNVGQANGTGELQHIICGARNFAEGDNVVIALPGTVLP-GPFEISARK 119 Query: 109 IRGIESTGMMCSEKELML-SDDSASIMELP------IDAPVGGRLSDYLELSDPIIDVSL 161 G S GM+CS E+ L S + IM + + VG + L L D I DV++ Sbjct: 120 TYGKISEGMICSAMEVGLASQQNPGIMTISDADLASANLKVGDDARELLGLQDTIFDVNI 179 Query: 162 TPNRSDCIGVRGIALDLVAAGLGKLK-------------EINISCPLSSESIPLEIKFDL 208 TP+R + RG+A +L ++ + + ++ P + + + Sbjct: 180 TPDRGYALSARGLARELASSFDLQFRDPAQDPAAAAMRNDLFAGLPGTDGEVQ---ALKV 236 Query: 209 DDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 D+ + C F M V G+ +P W+++ L G R ++ D+TNYV G P H F Sbjct: 237 DEDTKCSKFGMRKVTGIDPQAESPLWLQRELMLCGQRPVNPATDVTNYVMFLLGQPMHAF 296 Query: 268 DASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 DA +++ L VR A GEK+ LD+ E L P++VVI+ + IQS+AG++GG + + Sbjct: 297 DADKVTGELHVRLAKKGEKLTTLDDVERTLDPEDVVISDESGIQSLAGVMGGSTSEISEA 356 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TT+VL E A WD I +AR+ + + +++ RFERG D + L V+L++++ GG Sbjct: 357 TTNVLFEAAHWDQITVARTCRRHKLSSEASRRFERGTDAAIIEDALDFAVALLVNIAGGQ 416 Query: 388 ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYD----- 440 + + I S + +G P ++ L +G V G D Sbjct: 417 VEEGRTLVGAVPEMPMITIHTSLPGKTAGKIYPDGTTISRLREVGCEVRETGSRDDNGAR 476 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 + EV+ P+WR D+ ADLVEE+LR+ G++ I P + R + +Q R V + Sbjct: 477 EIEVTPPTWRPDLTMPADLVEEVLRLEGLEDI---PSIVPTAPAGRGYTPRQRMRRNVGQ 533 Query: 501 VLASRAMMEVVNWSFISKEQSVLF---GGGQREL--EILNPISADMSNMRTSLLPGLLKA 555 LA E++ FI+ + ++ R L ++ NP+ +D + + T+LLP ++++ Sbjct: 534 ALAWAGYAEILPTPFIANDVFDVWDLPADDPRRLTVKVQNPLESDYACIGTTLLPSMIES 593 Query: 556 TGRNVDRAIADFAIFEVSHVYEN-------------------------DTPEGQKYMAAG 590 RNV R D A++ V V D+ Q A Sbjct: 594 LRRNVTRGQRDAALYGVEQVSVPKSAKPFSPMPSVKQRPGAEELQELLDSLPAQPLHVAV 653 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS---VIEPFVSLD-SLRFESGAPS 646 + G+ ++G+ W + + F A ADA+ V+ ++ ++R P Sbjct: 654 VATGNRQLQGT---WGEP--------EAFTA-ADAIESARVVARAAGVEITVRNAEYLP- 700 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +HPGR I ++V G+ GE HP + + L E+ LD++P+ + T + Sbjct: 701 -WHPGRCAEILVGDKVV-GHAGELHPQVCERAELPPRTVAMEMNLDALPLEE---TFPRP 755 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 V LS+ V +D+A +VD+ PA + + ++ L++++ +FDV+ +SLGEGK+S+ Sbjct: 756 V--LSAFPAVLQDIAVVVDEATPAQDVEDALRAGAGELLEEIRLFDVYHSESLGEGKRSL 813 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + + T +++ + ++ +K A LR+ Sbjct: 814 TFSLRFRAPDRTLTEEEASKSREAALQFATEKVGAQLRA 852 >gi|166154689|ref|YP_001654807.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis 434/Bu] gi|166155564|ref|YP_001653819.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis L2b/UCH-1/proctitis] gi|301335959|ref|ZP_07224203.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia trachomatis L2tet1] gi|165930677|emb|CAP04174.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis 434/Bu] gi|165931552|emb|CAP07128.1| phenylalanyl-tRNA synthetase beta chain [Chlamydia trachomatis L2b/UCH-1/proctitis] Length = 790 Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 217/820 (26%), Positives = 377/820 (45%), Gaps = 60/820 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPD-- 57 M LS L+ + +S+E+I IG+E E + ++L+ K+LS +PD Sbjct: 1 MLVPLSLLQKFFSSPLSIEEILQACDRIGIEAECSNVFPDSLNTVVTGKILSASPHPDAE 60 Query: 58 -LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIE 113 L AI+ GK Q ++CGAPN R G++ A PG+ + + + KIRG+E Sbjct: 61 RLTVAIVFDGKGKRQ---IICGAPNCRAGIIVPIALPGAKLRNASGEITTIKKAKIRGLE 117 Query: 114 STGMMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 S GM C EL L I E P D P+G S + L+ ++ SLTPN C Sbjct: 118 SQGMCCGADELGFPHLQKAQRGIFEFPADTPLGE--SACMLLAGASLECSLTPNLGHCAS 175 Query: 171 VRGIALDLVAAGLGKLKEINISCP--LSSESIPLEIKF-DLDDSSLCKGFAMCCVKGVRN 227 + G+A ++ L ++++ P S S+P E D+ D+ C F + G+ Sbjct: 176 LLGLAREI-----SFLSPVSLNIPEEFSFASLPQETSICDMHDAGACPVFYSVKISGLSC 230 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 +P +++ L A+G + ++A+VDITNYV L G P H +D+ + + Sbjct: 231 RRSPEYLQAALTALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVEQKSLHAATLQSAQP 290 Query: 288 LALDNQE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 L L NQE Y L ++V+A I +AG++G + C +NTT++++E A + P + + Sbjct: 291 LTLLNQETYTLPAGSLVVADQHNILGLAGVMGSAASSCSENTTEIILEAAYFQPQAVRKY 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIV 405 + + + T++ YRF RGVD QG++P L + +I SL S I + ++ P + Sbjct: 351 QRTIQLHTEAAYRFTRGVDPQGVLPALHAAIHMIQSLFPDAQISPIQKIGDDSFFPLSLS 410 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +KRL I++ + + L LGF E V VPS+R D++E+ DLVEEI R Sbjct: 411 VRPKTIKRLLDIELSTAEIVAKLFSLGFQTAVEEQAVRVEVPSYRHDIQEETDLVEEICR 470 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 Q + LP + S R + LA+ + + S + E S L Sbjct: 471 TTPFVQKTQKILP--------TYTPIYSLKRELTAFLANGGLQQFFTCSLLDTEVSSLSL 522 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + P+ +R SLLPG+LK+ N+ R FE+ +VY + Q+ Sbjct: 523 QESSLI----PVQNSSWKLRDSLLPGMLKSAATNLHRQAPYVYAFEIGNVYSKEQNRYQE 578 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGA 644 I ++ S W K+ + + K ++ + S++ + Sbjct: 579 EERVAILLSRQVMDDS---WQGKTP-----LSFYTIKGWVEKLLCQSGASIEDFSLQPSQ 630 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HP + + + LG FG HP + + + + E+ L+ + +S KK++ Sbjct: 631 HPNFHPYQQAALYQKKHL-LGIFGTLHPQLCRKAQIKHDVVFAELSLNVL-LSLKKKSGP 688 Query: 705 KKVVHLSSLHPV-KRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGK 762 V + ++P RD+ +D+ +PA + ++ + ++ V + V+QG+ Sbjct: 689 HYVPY--PIYPASSRDITITIDRDLPADLVRRELLSFESKWLESVHIVSVYQGRDSASQS 746 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 K+V+++++ FRD + R L + +E ++ A+L Sbjct: 747 KNVSLRMV-------FRDHE-RTLSGQEIEEEYERLTALL 778 >gi|323698508|ref|ZP_08110420.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio sp. ND132] gi|323458440|gb|EGB14305.1| phenylalanyl-tRNA synthetase, beta subunit [Desulfovibrio desulfuricans ND132] Length = 800 Score = 260 bits (664), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 183/597 (30%), Positives = 296/597 (49%), Gaps = 31/597 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M +L+WL++ + + ++ + D LT +GLE++ + D EA+ + V E +P+ D Sbjct: 1 MLVSLNWLREFVPYEGDIQVLGDKLTMLGLELDGITDPFEAVQDIVVGFVAEREPHPESD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +D G + + +VCGAPNV G A G+ +P+ I K+RG++S GM+ Sbjct: 61 HLSVCTVDVGGPETLTIVCGAPNVAKGQKVPVALVGTTMPDGTKIKKA-KLRGVKSMGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL S+D I L VG +L D L L + D +TPNR+DC+ + G A + Sbjct: 120 CSERELGFSEDHEGIWVLDDALKVGDKLVDALNLERVVFDFDITPNRADCLSILGFARET 179 Query: 179 VAAGLGKLKEINISCPLSSESIPL---------EIKFDLDDSSLCKGFAMCCVKGVRNNV 229 A PL+ ++ L IK +DD C F +KGV Sbjct: 180 ALA---------FDLPLTMPALNLVEGGGNAADVIKILIDDPEYCPLFNGRVIKGVETRK 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKIL 288 AP+WMR +L A+G R IS +VD+TNY+ + G P H +D + D L V A G K Sbjct: 231 APDWMRFKLLALGQRPISNIVDVTNYIMFELGQPMHSYDLDLVEDATLRVALAEEGMKFT 290 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD+ E L+ ++++I R +AG++GG + +T+VL+E A++ P I ++ + Sbjct: 291 TLDDVERTLTSNDLLIRDGKRAVGLAGVMGGSNTEMHAGSTNVLLEAAVFRPGTIRKTAR 350 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIVFM 407 L + +++ YRFERGVD Q + L+ GGT + ++ R + Sbjct: 351 RLALPSEASYRFERGVDQQLNRFCIDRAAQLMAETSGGTVLKGVVTNEPRPWQDRSHGYR 410 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + L G+D+ + ++ E G +V D + V+ PS R D+E + DL EE+ R+ Sbjct: 411 HKRCMSLLGLDLEPAFAKKVFELEGCTVDDANPDNWTVNSPSHRLDLEREVDLYEEVGRV 470 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA---SRAMMEVVNWSFISKEQ-SV 522 YG+D+I P L +V +++RV + E +N+SF E Sbjct: 471 YGLDRI---PAVLPRVSKSLEGVAGTPVYHFIRRVKEWGRGVGLNETINYSFTGSENLDR 527 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 L + + I NP+S + + MRT L PGLL A N+ + +FEV+ + D Sbjct: 528 LHLPAEGRVYIANPLSEEQNVMRTELAPGLLSALKHNLAKGNNHIRLFEVAKQFLRD 584 >gi|297626564|ref|YP_003688327.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922329|emb|CBL56901.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 842 Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 232/869 (26%), Positives = 398/869 (45%), Gaps = 91/869 (10%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ L V+ +++ D T GL+VE ++ + P + +V+S P Sbjct: 1 MKAPISWLRSLVELPHGVTTQQLADAFTRTGLQVEHIELMGNQVTGPVVVGRVVSFVEEP 60 Query: 57 DLDCAILR---IDTGKHQEIQ-----------VVCGAPNVRVGLLGVWAPPGSCIPENNM 102 + +R +D G+ I ++CGA N G V A PG+ +P Sbjct: 61 QKNGKTIRWCHVDCGEQFNITDENPDVTDGRGIICGADNFAQGDYVVVALPGAELP-GGF 119 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPID----APVGGRLSDYLELSDPIID 158 ++ R+ G S GM+C+ EL + +D I+ LP + A +G L + D I+D Sbjct: 120 KISSRRTYGHVSDGMICAADELGIGEDHTGIIVLPANEASRAGLGSEAMALLGVPDEILD 179 Query: 159 VSLTPNRSDCIGVRGIALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGF 217 + +TP+ S C+ +RG++ + A +I + P S+ ++ + DD C+ F Sbjct: 180 IDVTPDMSYCLSMRGLSREAAQAFDVPYNDIYSRRVPEPSQGA-YPVRVESDD---CELF 235 Query: 218 AMCCVKGVRNNVAPN--WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 V + N +AP WMR RL+A G+RSIS VDITNYV L+ G P H +DA ++ Sbjct: 236 VDLVVHDI-NALAPTPTWMRHRLEASGMRSISLPVDITNYVMLESGQPLHAYDADQLLGP 294 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VR+A GE++ LD+ + +LS ++++I D +AG++GG + D+T +V++E Sbjct: 295 IVVRKAHQGERLTTLDSVDRELSAEDLLITDDSGPIGLAGVMGGLNTELSDSTRNVVIEA 354 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIA 394 A + P I R+ + + +++ RFER D+ + L++ L GGT +D + Sbjct: 355 AHFSPGTIGRTYRLHKLPSEASKRFERDTDIGVCCAAARMAARLLVELAGGTIADGATVV 414 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVE 454 + P + + + R+ G + + L + + V ++ + P+WR D+ Sbjct: 415 GRVPQMPGQSIDIGLPA-RILGARIEPDQVLSVFKGSDIEVTRRGERLSLVPPTWRTDLV 473 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 + D VEE+ R ++ + + + + E + L+ Q R V +A +EVV Sbjct: 474 DPYDYVEEVGRKLSLEVVNAV---VPRAEAGQGLTAVQKSRRAVLNAIAEAGFVEVVTLP 530 Query: 515 FISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 F+ + G R +++ NP+S +RT+LLPGL A RN R + D A+ Sbjct: 531 FVGTDDIDRLGLPAQADQHRLVKLANPLSDAQPYVRTTLLPGLFAAINRNTSRGMDDVAL 590 Query: 570 FE-----------------VSH--------VYENDTPEGQKYMAAGIRKGSSGIEGSGRL 604 FE VSH N P+ Q +M + + G+ Sbjct: 591 FEQGSVFLGGELPPAPMPDVSHRPSDAEIDALLNSLPD-QPHMLSAVLAGNW----LPAR 645 Query: 605 WSDKSE--ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG---IIKTS 659 W+ +E + V ADA V L +R ++ W HPGR I + Sbjct: 646 WNGPAEPVDWTHAVLFAQTAADA-------VGLRLIRSQAEIMPW-HPGRCAELSIRNSD 697 Query: 660 AEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV-K 717 ++V LG GE HP +++ GL C E+ LD + T VH S +P+ K Sbjct: 698 GDLVSLGAAGELHPRVIEACGLPARSCAVEINLDVL----LANAPTGGEVHELSPYPLTK 753 Query: 718 RDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 D+A IVD + A + +++ L++ + +FD++ G+ G+GKKS+A + + Sbjct: 754 EDVALIVDDTVAAADVEEVLRTGAGPLLESIALFDIYSGEQTGQGKKSLAFSLRFGSPER 813 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRSS 805 T + D + V + A R + Sbjct: 814 TLTQSEAAQARDNALAAAVSELGAQARQA 842 >gi|332366499|gb|EGJ44247.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1059] Length = 685 Score = 259 bits (661), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 200/707 (28%), Positives = 361/707 (51%), Gaps = 42/707 (5%) Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL +SD + I LP +A G + YL+L D II++S+TPNR+D + Sbjct: 1 MICSLGELGISDSVVPKEFADGIQILPEEAVPGEEVFSYLDLDDEIIELSITPNRADALS 60 Query: 171 VRGIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +RG+A + VAA K K+ + + L + + + +S +A ++ V Sbjct: 61 MRGVAHE-VAAIYDKSVHFKDFPLVENEKQAADSLSVALETEKASY---YAARILENVTI 116 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P W++ L G+R I+ +VD+TNY+ L G P H FD D + VR A +GEK Sbjct: 117 APSPQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDTFEGDQIVVREASAGEK 176 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ++ LD +E +L ++VI + ++AG++GG+ +T V++E A++D +I ++ Sbjct: 177 LVTLDGEERELEVSDLVITVADKPVALAGVMGGQATEISGQSTRVVLEAAVFDGKSIRKT 236 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 L + ++S RFE+G+++ + L S+I L G T + I A ++ ++V Sbjct: 237 SGRLNLRSESSSRFEKGINVATVNEALDAAASMIADLAGATVQAGIVSAGSLDTSDVEVV 296 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++V R+ G D+ D + + RLGF + G ++F VSVP R D+ +ADL EEI R Sbjct: 297 SSLADVNRVLGTDLLYTDIVDVFRRLGFGLSGNAEQFTVSVPRRRWDISIEADLYEEIAR 356 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 IYG D++ + LP + QQ R R V+ + + E++ ++ + E++V F Sbjct: 357 IYGYDKLPAS-LPKDDGTAGELTATQQLR-RQVRTLAEGAGLTEIITYALTTPEKAVEFT 414 Query: 526 GGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 L E++ P++ + S +R +++ G+L + NV R + A++E+ V+E T + + Sbjct: 415 LNPSNLTELIWPMTVERSVLRQNMVSGILDSLAYNVARKNKNLALYEIGKVFEQ-TGDPK 473 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + + I + + G L ++K + + VD F AK V+E + L E Sbjct: 474 EDLPNEINSFAFALTG---LVNEKDFQTKPVAVDFFYAKG----VVEALFAKLGLTAEYA 526 Query: 644 APSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS--Q 698 A S HPGR+ +I + V G+ G+ HP + + E Y+ + +S + Sbjct: 527 ANSQIKSLHPGRTALISIKGQPV-GFVGQVHPATAKAYDIP------ETYVAELNLSAIE 579 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQGK 756 ++ + ++ V RD+A ++ I +++ I+ V RL D+ +FD+F G Sbjct: 580 EQLQPAQPFTEITKFPAVSRDVALLLKAEITHQEVLDAIQAAGVKRLT-DIKLFDIFSGD 638 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 LG G KS+A + Q + + D+++ M++I +++ +K A +R Sbjct: 639 KLGVGLKSMAYSLTFQNPEASLTDEEVAKYMEKIEKSLTEKLGAEVR 685 >gi|325276805|ref|ZP_08142507.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] gi|324098065|gb|EGB96209.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] Length = 537 Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 173/559 (30%), Positives = 288/559 (51%), Gaps = 36/559 (6%) Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 LDRG P H FD + I+ + VR A GEK++ LD QE L D +VIA R +IAG++ Sbjct: 1 LDRGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVALRADTLVIADHTRALAIAGVM 60 Query: 318 GGKHAGCDDNTT-DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 GG+H+G + TT D+ +E A ++PI++A ++ G+ TD+ +R+ERGVD ++ Sbjct: 61 GGEHSGVNTETTRDLFLESAFFEPISVAGKARSYGLHTDASHRYERGVDSHLAREAMERA 120 Query: 377 VSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLSGIDV---PIEDSLRILERL 431 L+L + GG A + A + + P+ + + ++ G+++ +E L LE L Sbjct: 121 TQLLLDIVGGEAGPVVEAVSEQHLPQVAPVTLRAERITQMLGMEMDPAQVEQLLNALE-L 179 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-----KSEPLPLTQVEDKR 486 S E ++ V+VPS R D+ + DL+EE+ R+YG + + ++ P + E + Sbjct: 180 TTSKAAE-GEWTVTVPSHRFDISLEVDLIEELARLYGYNNLPVRYPQARLAPQGKPETRG 238 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT 546 +L ++R+L +R E + +SFI + LF G L + NPIS+DM+ MR Sbjct: 239 DLP-------TLRRLLVARGYQEAITYSFIDPKLFELFSPGVEPLLLANPISSDMAAMRA 291 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLW 605 SL PGL+KA N++R +FE + + Q+ M AG+ GS EG W Sbjct: 292 SLWPGLVKALQHNLNRQQDRVRLFESGLRFVGQLGDLQQQPMIAGVVTGSRLPEG----W 347 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 ++ + VD FD KAD +++ +L F +G HPG++ I+ ++V G Sbjct: 348 ANGRDG----VDFFDVKADVEALLGYSGALSDFTFSAGKHPALHPGQTAAIERDGKLV-G 402 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 Y G HP + L P+ FE+ L + + K LS +RDLA I Sbjct: 403 YLGAIHPELAKALDLDRPVFLFELVLGDV-----VEGRLPKFSELSKFPETRRDLALIAG 457 Query: 726 QHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + + A ++ +I+ N + D+ +FDV+QGK + +KS+A+ + Q T DD++ Sbjct: 458 RDVAASAVLELIRDNAGEWLTDLRLFDVYQGKGIDPDRKSLAVGLTWQHPSRTLNDDEVN 517 Query: 785 ILMDRIVENVVKKTNAVLR 803 + I+ ++ ++ N LR Sbjct: 518 TTLQNILTSLEQRLNTTLR 536 >gi|91201677|emb|CAJ74737.1| similar to phenylalanyl-tRNA synthetase beta chain [Candidatus Kuenenia stuttgartiensis] Length = 669 Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 195/667 (29%), Positives = 324/667 (48%), Gaps = 53/667 (7%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP-LSSES---IPLEIKFDLD 209 D ID+ +T NRSDC+G+ GIA ++ A G L+ + C +S E I +K D+ Sbjct: 41 DYCIDLEVTANRSDCMGIIGIAREVAAITKGSLQ---LPCTDISREGDGDISQNVKVDVK 97 Query: 210 DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 + LC + ++ + +P W+++RLK +GLR ++ +VDITNYV ++ G P H FD Sbjct: 98 EPLLCSQYTARVIRNIMVKPSPEWLQKRLKCIGLRPVNNIVDITNYVMMESGQPLHAFDL 157 Query: 270 SRISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 ++S + VR+A SGE+I+A++ L D ++IA + R +IAG+IGGK D T Sbjct: 158 DKVSGGQIQVRKAESGEEIVAINGARRVLFHDMLIIADEKRPIAIAGVIGGKETEVTDVT 217 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 ++L+E A ++P + R+ K+LGI++DS RFERGVD G+ K LI+ GG Sbjct: 218 RNILIECARFEPRQVRRTSKSLGIVSDSSCRFERGVDPLGLDFASKRAAKLIIEHAGGEM 277 Query: 389 SD--ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVS 445 I ++ N + +K+V VK++ G+D+ + L IL L F ++ D F +V Sbjct: 278 CKGIIDVSAN-RIEAKKVVLRIERVKKILGVDINRDVILDILRSLQFKILNCADTFIDVE 336 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS--RTRYVKRVLA 503 +P +R DV + DL+EE+ RIY + I ++ + K + ++ R Sbjct: 337 IPGFRGDVSREIDLIEEVSRIYDYNNIPAKTSIGIRGSKKSKYEIVENLIRNNLTGLGFY 396 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 +VN +F+ + V G+ +EI NP+ + S +RTSLLP L K N + A Sbjct: 397 ETKTFSIVNHAFL---KGVNLWSGEDVVEIANPLRQEESILRTSLLPSLAKVKIHNANHA 453 Query: 564 IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG----RLWSDKSEERCRFVDLF 619 +FE++ +Y + + + + EG G L + K E+C +V Sbjct: 454 CEKVKLFEIAKIYLKGEKLPHEKVGLSLLDSAGFFEGKGIVQSLLKNLKIHEKCEWV--- 510 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 F L A G++ LGY GE + G Sbjct: 511 -----------AFHEKTRLFNNEKAAKILMDGKT----------LGYIGEASKEL----G 545 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 E+ +D++ +K KK S VKRD A +VD+ ++ + I Sbjct: 546 FKTLCTLIELDVDALV---EKAHFDKKYCEPSPYPMVKRDFAIVVDEEKTWASIEDCING 602 Query: 740 VD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + ++ +V FD+++GK + EGKKS+A + Q + T + +++ I++ + KK Sbjct: 603 ANISIVKEVNYFDIYRGKQIPEGKKSIAFNLCFQSYERTLKSEEVDDASAVILDALYKKL 662 Query: 799 NAVLRSS 805 A LR+ Sbjct: 663 GAELRTQ 669 >gi|183219730|ref|YP_001837726.1| phenylalanyl-tRNA synthetase subunit beta [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909866|ref|YP_001961421.1| phenylalanyl-tRNA synthetase subunit beta [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238064698|sp|B0SAR6|SYFB_LEPBA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|238064699|sp|B0SJF2|SYFB_LEPBP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|167774542|gb|ABZ92843.1| Phenylalanine--tRNA ligase beta subunit [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778152|gb|ABZ96450.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain; PheRS) [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 799 Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 222/821 (27%), Positives = 395/821 (48%), Gaps = 61/821 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 MK ++ WL + + + EK+ + + + E++ V+ + LS VK+ S+E++P+ Sbjct: 1 MKLSVDWLNEFTPLSQIPFEKVLEKINTSICEIDDVEEFKSHLSSVITVKIKSLEKHPNA 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + I T +E Q+V A NV VG + A PG+ + ++ + ++RG+ S GM Sbjct: 61 EKLQTTIATDGSKEYQIVTAATNVAVGDIVPLALPGTKLDGKEILDS--ELRGVRSQGMY 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPI--IDVSLTPNRSDCIGVRGIAL 176 CSEKEL ++ +S+ ++ LP D +G + Y D I ID +R D G A Sbjct: 119 CSEKELGMALESSGVLILPKDTTLGISVRKYFLWEDTILTIDNKSITHRPDLWNHFGFAR 178 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKFD-------LDDSSLCKGFAMCCVKGVRNNV 229 +L + + PL + + K++ ++ S + +C ++ V Sbjct: 179 ELAS---------QLQIPLHHFPLQADTKWESGNQGLTVEKSEHAHAYYVCSIQNVNITE 229 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 + ++ RL+ G+RSI+ +VD++NY+ L+ G P+H FD S++ S TV ++ GE I Sbjct: 230 SIPKIKSRLEKCGIRSINNVVDVSNYLLLELGQPTHFFDRSKLQSTSFTVSKSKEGESIS 289 Query: 289 ALDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD+ L P+++++ +G ++AG++GGK + ++T ++++E A++ ++ + Sbjct: 290 LLDDTSPTL-PNHILLIQNGETPVALAGVMGGKDSAVSESTKEIVMESAVFKREDVRYTI 348 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 + I T+S R+E+G+D +PV+K V L L G + + + K V + Sbjct: 349 RKTNIRTESAVRYEKGLDSYTCLPVMKRAVQL-LKENGNPNVKVFEPQGFNHTESKTVTI 407 Query: 408 NSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ--DVEEKADLVEE 462 + + L G + + + IL+RLGF V + + V VP +RQ DV DLVEE Sbjct: 408 ETNLSFLRHKLGKKISLHEVTDILQRLGFEVTTKDESLSVLVPKYRQNYDVTIPEDLVEE 467 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFISKEQS 521 I R G I++E L + RN L++ R VK+ LA EV N+SF S + Sbjct: 468 IGRTIGYASIRTEALSMAVETPIRN-PLRELERR-VKQFLALEVGFNEVYNYSFASPTDA 525 Query: 522 VLFGGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 L + L+I N + + S +R SL PGL+K T N DR +FE+ Y Sbjct: 526 KLEKEFEVTSLKIANEMPEEHSLLRNSLYPGLIKQTKVNQDR-FEKVNLFELGRTYH--- 581 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLW-SDKSEERCRFVDLFDAKADALSVIEP------FV 633 ++G+ + W S S +C+ DL + + L+V E F+ Sbjct: 582 -----------KEGNDATLAQEKRWISLLSLSKCKPTDLSSIEDEFLTVRETISELFLFL 630 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +L + + +HP S ++ + V+ G H D + L ++ ++ Sbjct: 631 NLPKFEWVKLPRTHFHPNASLVLLYDGKEVVE-LGILHTRFADLYDLKRRAILSKIDMEV 689 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL--IDDVTVFD 751 + + + V S + DL+ I+++ P + N++K + R+ ++ V V Sbjct: 690 LVQIWETYGRNSHFVPPSHFPQGQLDLSLIMNESDPTESFANLVKTL-RIPELESVFVQT 748 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +FQG+S+GEGKKSV + ++ TF D + L DR+VE Sbjct: 749 IFQGESVGEGKKSVTYRFILMSYDKTFTQDRFKELSDRLVE 789 >gi|332203747|gb|EGJ17814.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae GA47368] Length = 685 Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 201/708 (28%), Positives = 351/708 (49%), Gaps = 44/708 (6%) Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 M+CS EL +SD + I LP DA G + YL+L D II++S+TPNR+D + Sbjct: 1 MICSLGELGISDSVVPKEFADGIQILPEDAVPGEEVFSYLDLDDEIIELSITPNRADALS 60 Query: 171 VRGIALDLVAAGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G+A + VAA K KE ++ + + L + D + +A + V Sbjct: 61 MCGVAHE-VAAIYDKAVNFKEFTLTETNEAAADALSVIIGTDKAPY---YAARILDNVTI 116 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEK 286 +P W++ L G+R I+ +VD+TNY+ L G P H FD + VR A +GEK Sbjct: 117 APSPQWLQNLLMNEGIRPINNVVDVTNYILLYFGQPMHAFDLDNFEGTDIRVREARAGEK 176 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 ++ LD +E DL +++VI + ++AG++GG+ + ++ V++E A+++ +I ++ Sbjct: 177 LVTLDGEERDLDVNDLVITVADKPVALAGVMGGQATEISEKSSRVVLEAAVFNGKSIRKT 236 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKIV 405 L + ++S RFE+G+++ + L SLI L G T I A + ++ Sbjct: 237 SGRLNLRSESSSRFEKGINVATVNEALDAAASLIAELAGATVRKGIVSAGELDTSDVEVS 296 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 ++V R+ G ++ D + RLGF + G D F V VP R D+ +ADL EEI R Sbjct: 297 STLADVNRVLGTELSYADVEDVFRRLGFGLSGNADSFTVRVPRRRWDITIEADLFEEIAR 356 Query: 466 IYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 IYG D++ P L + + L+ Q R V+ + + E++ ++ + E++V F Sbjct: 357 IYGYDRL---PTSLPKYDGTAGELTATQKLRRQVRTIAEGVGLTEIITYTLTTPEKAVEF 413 Query: 525 GGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 L E++ P++ D S +R +++ G+L NV R + A++E+ V+E T Sbjct: 414 TAQPSNLTELMWPMTVDRSVLRQNMISGILDTVAYNVARKNKNLALYEIGKVFEQ-TGNP 472 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFES 642 ++ + I + + G L ++K + VD F AK ++E + L+ Sbjct: 473 REELPNEINSFAFALTG---LVAEKDFQTVAVPVDFFYAKG----ILEALFARLGLQVTY 525 Query: 643 GAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS-- 697 A S HPGR+ I + VLG+ G+ HP + + E Y+ + +S Sbjct: 526 TATSEIASLHPGRTAAISLGDQ-VLGFLGQVHPVTAKAYDIP------ETYVAELNLSAI 578 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLIDDVTVFDVFQG 755 + V ++ V RD+A ++ + +V+ I+ V RL D+ +FDVF G Sbjct: 579 EAALQPAAPFVEITKFPAVSRDVALLLKAEVTHQEVVDAIQAAGVKRLT-DIKLFDVFSG 637 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + LG G KS+A + Q +D+ D+++ M++I ++ +K NA +R Sbjct: 638 EKLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQASLEEKVNAEVR 685 >gi|315924319|ref|ZP_07920542.1| phenylalanyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] gi|315622390|gb|EFV02348.1| phenylalanyl-tRNA synthetase beta subunit [Pseudoramibacter alactolyticus ATCC 23263] Length = 797 Score = 256 bits (655), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 229/838 (27%), Positives = 390/838 (46%), Gaps = 78/838 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERNP 56 M +L+WLK++++ D ++ D LT G +VE + + ++P K+ + ++P Sbjct: 1 MLVSLNWLKEYVNVDQDVKTFGDILTMTGTKVETI---QPVNPNVQGILTGKITRIAKHP 57 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + D I +D G Q + ++ A NV VG + A GS I + + + RGIES Sbjct: 58 NSDKLQICDVDFGD-QTLPIITSAKNVFVGAVVPVAVAGSVIADGSKM-KPTSFRGIESP 115 Query: 116 GMMCSEKELMLSDD--SASIME----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 GMMCS +E+ L S IM LP D +G + D ++D IIDV LT NRSDC Sbjct: 116 GMMCSVEEMGLDTGLFSQEIMNGIYILPEDTKLGQEIRDLFWVNDQIIDVELTANRSDCQ 175 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLS--SESIPLEIKFDLD-DSSLCKGFAMCCVKGVR 226 + GIA + AA ++ I + + +P+E + +S LC + K + Sbjct: 176 SIYGIAREAAAALDEPIEPITLYQEAQEIQDVLPIENFLKVSVESDLCPRYTARMFKVNK 235 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEK 286 +P WM+++L G+R I+ +VD+TNYV L+ G P H FD I + + C + Sbjct: 236 IEPSPIWMQRKLLNSGVRPINNIVDVTNYVMLEVGQPLHAFDYQSIGSQEIIVKQCDDQS 295 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + LD QE + + ++I + + ++AGI+GG ++ D T V++E A +D ++ ++ Sbjct: 296 VTTLDGQERAIDAEMLMITNGRKPIAVAGIMGGLNSEITDQTEYVVLESACFDKTSVRKT 355 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-----DICI----ARNI 397 + G+ T++ R+E+G G+ V + + G DI A I Sbjct: 356 SRKTGLRTETSARYEKGT-FPGLCEVAALRAAYLFESTGACEVIPGMIDIYPHPEEAHTI 414 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEK 456 T P+ I R GID+ +D ++IL RL V + + +V VP +R+D+ + Sbjct: 415 TVDPQWI-------SRFLGIDISADDIVKILNRLFLEVQPADGQRLKVIVPEYRRDLRIR 467 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D+ EE+ RIYG D I + + T + + Q +T+ ++ +L + + SF Sbjct: 468 EDIAEEVARIYGYDHIPNTIMGGTTLVGLKT-DAQVFKTK-IEDLLIGSGYFQTMTTSFT 525 Query: 517 SKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 S + + + + I+NP+ D + MR +L L N R FE++ Sbjct: 526 SLKTIHDMQMDEVEAPVVIMNPLGEDSAVMRFTLAGEQLSLIALNHSRKNPSGRFFEIAS 585 Query: 575 VYE-----NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 Y +D P K++ D + K ++ Sbjct: 586 TYHVNSDTSDLPIETKHLVMTSYNAD---------------------DFYSFKGVTERIL 624 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 V S+RFE+G +HPGR II + +G GE HP + F L Sbjct: 625 AE-VGRTSVRFEAGGDHLFHPGRKAIISIDG-VSVGQMGEIHPIVAKKFALPK-----HT 677 Query: 690 YLDSIPISQKKRTKTKKVVHLSSL--HP-VKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 L + + +++H L +P RDLA IV + +P+ + II++ +++ Sbjct: 678 LLAEFDFNILTEMASDRIIHFDDLPKYPSSNRDLAVIVPEALPSSAVWEIIEDHHADIME 737 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + +FDV++G+ +GEGKKS+A + + + T DDDI ++D IV ++ K +A LR Sbjct: 738 SIDLFDVYRGEQIGEGKKSLAFSMTFRHAERTLTDDDINPIVDAIVSDLETKLHAQLR 795 >gi|123966185|ref|YP_001011266.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9515] gi|123200551|gb|ABM72159.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9515] Length = 820 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 226/858 (26%), Positives = 406/858 (47%), Gaps = 93/858 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MK + +WLK +D + S E + + L+ G EVE + N E + + KV+SV ++ + D Sbjct: 1 MKVSQNWLKSLVDINTSPEDLSEKLSIGGFEVESLINCSENVKGVVLGKVISVVKHDNSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I +D G +Q+VCGA NV+ + A G + N+ + +IRG S GM+ Sbjct: 61 KLSICNVDIGSSNSLQIVCGAKNVKANIYVYVATVGVHLNAINLTIKKSEIRGTLSEGMI 120 Query: 119 CSEKELMLSDDSASIM----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS +EL + D+S I E +G + L+L+D + D+++T NR D + V GI Sbjct: 121 CSLEELGIEDNSEGIAIIEEEKASKHILGTPAALLLDLNDYVYDLAITANRPDGMSVVGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC-KGFAMCCVKGVRN------ 227 A ++ A L E N++ P + + D D LC + C+ + Sbjct: 181 AREISA-----LLETNLNLPKIKNVYEINVHKDFD---LCTEAITKKCLYSISKIVSVSG 232 Query: 228 -NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LT 277 + P W++ RL G+ SI+ LVDITN++ L++G P H FD +++++ + Sbjct: 233 KKITPQWIKDRLDKSGINSINLLVDITNFILLEQGQPLHAFDFDKLTNLVGREVLPEDFS 292 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 VR+A E +L L+ + Y L+ + +IA D + +IAG+IGG D T+ + +E A+ Sbjct: 293 VRKAKENESLLCLNGEIYKLNENITIIACDDKPVAIAGVIGGLQTAVDKETSSIYLEGAV 352 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG------------ 385 ++P+ I +S K +G+ T+S R+E+G+ + + + +++I Sbjct: 353 FNPVTIRKSVKEIGVRTESSSRYEKGISFKNTLNSVSRAINIIEEYFNITKPVIHTSIDL 412 Query: 386 -GTASDICIARNITYK---PRKI----VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 T I + RN +K P I MN ++++ + D I D L++ +G + Sbjct: 413 PNTEILIPLRRNRIHKLLGPLAIRNNDYEMNGQIQKRNLSDKEITDKLKL---IGCKLNN 469 Query: 438 EYDKFEVSV-PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRT 495 + ++V V P+ QD+ + DL+EEI R+ G D P P+ + LS Q Sbjct: 470 KEYGWDVEVIPNRSQDLVREIDLIEEIARLIGYDMFDFNLPNPIKPGK----LSSSQIAL 525 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 R +K EV+++S + + + L ++I NP+ + S +R ++ +K Sbjct: 526 RKLKTGFIDNGFNEVLSYSLVPETNNDL-------IKISNPLLTETSCLRDNIWQEHIKI 578 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 +N++ IFEV +++ Q+ + G G++ + + + +E + Sbjct: 579 CNQNINSGYDYCWIFEVGNIFHKKPDISQEEILNGAIYGNNKFD---KWYRSSKDENLNY 635 Query: 616 VDLFDAKADALSVIEPFVS---LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 + +AL+++ + DS+ F HPGR+ + T + V GYFGE HP Sbjct: 636 YEARGKLKEALTLLNISIEDKPTDSIDF-------LHPGRTAKLFTEGKEV-GYFGEIHP 687 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK------VVHLSSLHPVKRDLAFIVDQ 726 + +SN ++YL S+ I T+K ++ ++RD+ FI ++ Sbjct: 688 KL-----VSNKKALKKMYLFSLKIPNILNACTRKNKWIPVYKQFPTVPKMERDINFIFNK 742 Query: 727 HIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 +V+ IK +L+++V + DV+ S G S ++ + + T D DI Sbjct: 743 KYLVNEIVSQIKKSGKKLLEEVNLIDVYDDNSFGNDFISYTFRLSYRDSEKTLLDSDIVD 802 Query: 786 LMDRIVENVVKKTNAVLR 803 L + IVE + KK + LR Sbjct: 803 LHENIVEIIEKKFSTKLR 820 >gi|210616174|ref|ZP_03290975.1| hypothetical protein CLONEX_03194 [Clostridium nexile DSM 1787] gi|210149903|gb|EEA80912.1| hypothetical protein CLONEX_03194 [Clostridium nexile DSM 1787] Length = 704 Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 205/717 (28%), Positives = 341/717 (47%), Gaps = 67/717 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +LSW+K ++ D DV+ ++ D +T G +VE + +A L I ++ +E++PD Sbjct: 1 MNTSLSWIKAYVPDLDVTAQEYTDAMTLSGTKVEGFEVLDADLEKIVIGQIDKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVG------LLG--VWAPPGSCIPENNMIVNVRKI 109 D + +++ G + +Q+V GA NV G L G V + E + + K+ Sbjct: 61 DKLVVCQVNVGT-ETVQIVTGAKNVFEGAKVPVVLDGGRVAGSHDGKVVEGGIKIKKGKL 119 Query: 110 RGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTP 163 RG+ES GMMCS +EL + D I DA VG + L +D + + +T Sbjct: 120 RGVESFGMMCSIEELGSTTDMYPEAPENGIYIFEEDAVVGSSAIEALGRNDVVFEYEVTS 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR DC V GIA + A + ++ + E + IK ++++ LC + VK Sbjct: 180 NRVDCFSVVGIAREAAATFRKEFCPPVVAETGNDEDVNDYIKVTVENTELCPRYCARVVK 239 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRAC 282 V+ +P WM++RL +VG+R I+ LVDITNYV + G P H +D S I+ + + V+ A Sbjct: 240 NVKIGPSPRWMQRRLASVGIRPINNLVDITNYVMEEYGQPMHAYDLSTIAGNEIVVKTAK 299 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +GEK + LD QE ++ ++I + IAGI+GG+++ D+ +VL E A +D N Sbjct: 300 AGEKFVTLDGQEREMDESVLMICDGEKSVGIAGIMGGENSMITDDVQNVLFEAACFDGTN 359 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKP 401 I +S K +G+ TD+ +FE+G+D + LI L G + +P Sbjct: 360 IRKSSKKVGLRTDASGKFEKGLDPNNAKAAIDRACQLIEELGAGEVVGGTVDVYGKEKEP 419 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEKADL 459 ++ F ++ + G D+ E+ L E++G EYD EV P++R D+ ADL Sbjct: 420 VRVPFDAEKINVMLGTDISEEEMLGYFEKIGL----EYDAEAKEVITPTFRHDLFRLADL 475 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 EE+ R YG D I + LP + + LS + + + + + +SF S + Sbjct: 476 AEEVARFYGYDNIPT-TLPRGEATTGK-LSFKLRVEEVARNIAEFCGFSQGMTYSFESPK 533 Query: 520 --QSVLFGGGQR---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +L + +EI+NP+ D S MRT L G+L + N +R D ++E+ + Sbjct: 534 VFDKLLLPADSKLREAVEIMNPLGEDYSIMRTISLNGMLTSLATNYNRRNKDVRLYELGN 593 Query: 575 VY-ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS---VIE 630 +Y P ++ EER +F + D S V+E Sbjct: 594 IYLPKQLP-----------------------VTELPEERMQFTLGMYGEGDFFSMKGVVE 630 Query: 631 PFVSLDSLRFE------SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 F +++ + + ++ HPGR I ++V GY GE HP + D +G+ Sbjct: 631 EFFEKNTVCMKKKTYNPNAGKTFLHPGRQANIIYGGKVV-GYLGEVHPEVADIYGIG 686 >gi|29839915|ref|NP_829021.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila caviae GPIC] gi|33301716|sp|Q824J8|SYFB_CHLCV RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|29834262|gb|AAP04899.1| phenylalanyl-tRNA synthetase beta chain [Chlamydophila caviae GPIC] Length = 793 Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 216/824 (26%), Positives = 384/824 (46%), Gaps = 63/824 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ +LS L+ + + +++I + IG+E E V+ S +I+ KVL +P+ Sbjct: 1 MRVSLSSLQRFFSSPLPIKQIIEACDHIGIETE-VETLLTCSFSSIITAKVLKTVPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 D ++ QE Q+VCGAPN R G++ A PG+ + + N + K+RG+ES Sbjct: 60 DKLVVATLFDGQQEYQIVCGAPNCRPGIIIPLALPGAKLHDHEGNAYTIKKSKLRGVESQ 119 Query: 116 GMMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + E P + P+G S L+D I+ SLTPN C + Sbjct: 120 GMCCGADELGFAHLQTTERGLFEFPENTPLGE--SACALLADTFIECSLTPNLGHCASLL 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEI---KFDLDDSSLCKGFAMCCVK--GVRN 227 G+A ++ + +++ P PLE + D LC F CCVK GV Sbjct: 178 GLAREIT-----YVTNVDLVLPPEFVCTPLETITKETSGQDQHLCPIF--CCVKISGVSA 230 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P ++ L + +SI+++VDITNY+ L G P HV+DA+ + D L ++A E Sbjct: 231 QASPQELQNALGGLKQKSINSIVDITNYIMLSLGQPLHVYDANAVDIDSLHAQKAQKDEP 290 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+N+E + +I +AG++G + +D TT++++E A + P I S Sbjct: 291 LKLLNNEEVLVPQGTAIICDKDHTVGLAGVMGSLDSSFNDATTEIILEAAYFLPSAIRAS 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 ++ I +++ YRF RG+D ++P L + I L T + + F Sbjct: 351 QTHVPIHSEAAYRFTRGIDPNNVLPALYAAIHYIQKLFPNAKVSPIQVLGSTPQASTLSF 410 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILR 465 V ++ G+ + L LGF++ E + V++PS+R D++E+ DLVEE+ R Sbjct: 411 RTELVGKILGMPLHASQVRDQLHSLGFNISSEENSILSVNIPSYRHDIQEEIDLVEEVCR 470 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSV 522 ++P +VE+K+ ++ +RV LA+ + + + E + Sbjct: 471 --------TQPW---KVENKKAPAIYSPMYSLKRRVVDFLANSGLQQFFTCDLLDTETAA 519 Query: 523 LFGGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 L + E + ++ S + +R SLLPGLLK+T N++R FEV Y + Sbjct: 520 L---NREEADCISLQGSKQATVLRDSLLPGLLKSTATNLNRQAPYVHAFEVGTTYTKKSS 576 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRF 640 + Q+ + GI + G S S ER + + K + + VS + Sbjct: 577 KYQETQSLGII-----LSGQAEEISWISHERP--LSFYSIKGWIERLFQYLHVSSQAYAI 629 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + + +HP + I VLG FG HP + + + + E+ LDS+ +Q Sbjct: 630 QPYEHANFHPYQQAEIHLHKH-VLGRFGTLHPQLCKKAQIKHSVFFAELSLDSLLHTQ-- 686 Query: 701 RTKTKKVVHLSSLHPVK----RDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQG 755 KK +HL +P+ RD+ V + +PA +L ++ + ++ V++ ++Q Sbjct: 687 ----KKALHLYKPYPIYPSSFRDITLTVHESVPADSLRKKLLSFHSKWLESVSIISIYQN 742 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 K+ K+V+++++ Q + T + +I +R++ + + N Sbjct: 743 KNPTTQNKNVSLRLVFQDKERTLSNQEIEEEHERLLAMLNAQIN 786 >gi|288574766|ref|ZP_06393123.1| phenylalanyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] gi|288570507|gb|EFC92064.1| phenylalanyl-tRNA synthetase, beta subunit [Dethiosulfovibrio peptidovorans DSM 11002] Length = 800 Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 237/822 (28%), Positives = 399/822 (48%), Gaps = 81/822 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 M + +WL + ++ VS+E + + LT G E+E + E L+ + +V S+ +P Sbjct: 2 MLVSWNWLNELVNLPVSMETVAERLTVTGNEIEAIHRPCERLAGIVVAQVSSIVPHPRSG 61 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ +D G + I V A N+ VG +AP G+ I + ++ + R+ G+ S+GMM Sbjct: 62 NLLLVDLDRG-NGSISCVTAAKNLSVGDKVPYAPSGATIADGTVLSD-REFDGVVSSGMM 119 Query: 119 CSEKELMLSD--DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL L D D I+ LP G L L D I+++S+TPNR D + +RGIA Sbjct: 120 LSAEELGLPDVADEFGILRLPEHLGAGDDAVKALRLDDFILELSITPNRGDMLSMRGIAR 179 Query: 177 DLVA----AGLGKLKE-INISCP---LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +++A A + K E +++ P + I LE DD C + M ++ Sbjct: 180 EVIALFPEASMRKGDEPVSLGDPDWDFDFKGITLE-----DDG--CPVYLMGMADRLKIA 232 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKI 287 +P R RL G+R ++ +VD+TN L G P H FDA R+ D ++VR A GE+ Sbjct: 233 PSPIEARIRLALCGMRPVNNVVDVTNLTMLALGQPLHAFDADRLPDRSISVRSALQGERF 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD++E L ++VI S ++AG++GG ++ +D TT +L+E A++DP I + Sbjct: 293 VTLDHKERVLDSSDLVICSGDSSVALAGVMGGLNSEIEDGTTRLLLEGAIFDPARIGSTS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL-CGGTASDICIA-RNITYKPRKIV 405 + LG+ +++ YR+ RGVD + + + SL+ C AS + A R T +P + Sbjct: 353 RRLGLPSEASYRYARGVDPELPERAIDYAFSLLKDWGCAEVASGVARAFRGDTNRP-VVS 411 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGF-----SVIGEYDKFEVSVPSWRQDVEEKADLV 460 ++ R++ D +E++ IL RLG S G F+ VPS+R D+ + DLV Sbjct: 412 LTKRKLARITQWD-DMEEASSILSRLGLVEVEVSENGCVRSFK--VPSYRPDISIEEDLV 468 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE+ RI G D I S +P + L + +R ++ + +R +EVV++SF S + Sbjct: 469 EEVARIRGYDVIPSR-IPGCSYGTGK-LGAVTATSRELRSLAIARGYVEVVSYSFHSPKY 526 Query: 521 SVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI-ADFAIFEVSHV 575 R L + NPIS ++S MR+++LPGLL++ R + +FE V Sbjct: 527 GETLRLEDDPRGRFLSLSNPISGELSVMRSTMLPGLLESLRRTLRSGWRGPVRLFESGRV 586 Query: 576 Y---------ENDTPEGQKYMAAGIRK--GSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 + E D G Y R G S ++ DL KAD Sbjct: 587 FRLDERDELIEFDRISGLVYPGKDTRSPYGESVVD-----------------DLLSVKAD 629 Query: 625 ALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 ++ F +RF G + H G++ I V+G+ P + L Sbjct: 630 ----VQSFGLSRKVRFSFVQGEEPFGHLGQTAHIVYDG-AVIGFMVRLKPAVESELDLDG 684 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-D 741 P+ FE D P+ + + SS PV RD++ + D + +++ ++N+ D Sbjct: 685 PVFCFE--FDLAPLLED---PVLRFGQGSSYPPVFRDISLLADSSVSVESVIGDVENLAD 739 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 L+D V +FD+++GK + EGK+S+A + + T +D ++ Sbjct: 740 DLLDKVRLFDIYEGKGIPEGKRSLAFSMAYRSSDRTLKDKEV 781 >gi|255589223|ref|XP_002534883.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] gi|223524424|gb|EEF27498.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] Length = 421 Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 151/424 (35%), Positives = 237/424 (55%), Gaps = 8/424 (1%) Query: 29 GLEVEKVDN-REALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 GLEVE++ A S + ++L ++PD D + ++ G+ + +Q+VCGA N RVG+ Sbjct: 3 GLEVEELTPVAPAFSHVVVAEILEAAKHPDADRLQVCKVKVGE-EVLQIVCGASNARVGI 61 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 A G+ +P + + K+RG+ES GM+CS KEL ++ ++ I+ELP DAPVG + Sbjct: 62 KIPCALVGAELP--GIQIKQAKVRGVESFGMLCSAKELGIATEANGILELPADAPVGQDI 119 Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 +YL+L+D + LTPNR+DC+ + GIA D+VA + I+ ++ S L Sbjct: 120 REYLDLNDSTYTLKLTPNRADCLSILGIARDVVAMTGAPITTPEIAA--ATISSKLTKAV 177 Query: 207 DLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSH 265 L+ + C + + GV P+WM +RL+ G+RSISALVDITNYV L+ G P H Sbjct: 178 SLNAAEACPAYYGRVIAGVNAQANTPDWMVRRLERSGIRSISALVDITNYVLLELGQPMH 237 Query: 266 VFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 FD + + + VR A +GEK+ L++ E L D++VIA ++AG++GGK Sbjct: 238 AFDHALLQGDVAVRFANAGEKLALLNDTEVTLKADDLVIADGNGPVALAGVMGGKPTSVT 297 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 D T + +E A + P +A + LG+ TDS YRFERGVD + L+ +L+L +CG Sbjct: 298 DATQAIFLESAFFTPDVMAGKARRLGLSTDSSYRFERGVDFGNTLNALERATALVLEICG 357 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 G A + +++ ++ + + GIDV + ++L +LGF F VS Sbjct: 358 GQAGAVTAVTAQLPVRKQVALRHAYLLSILGIDVSLAQVGQLLTQLGFVYTEANGVFNVS 417 Query: 446 VPSW 449 PS+ Sbjct: 418 APSF 421 >gi|33240416|ref|NP_875358.1| phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|41018298|sp|Q7VBX6|SYFB_PROMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33237943|gb|AAQ00011.1| Phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 837 Score = 254 bits (650), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 231/862 (26%), Positives = 422/862 (48%), Gaps = 83/862 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDLD 59 MK +LSWL + +D +E++ D+L+ G EVE+ +D +L V+ + +P+ D Sbjct: 1 MKVSLSWLNELVDIHCDVEELADSLSMAGFEVEELIDLSASLEGIVTGYVIDISPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D GK + IQ+VCGA N+R G+ + A G+ + + ++ + +RG S GM+ Sbjct: 61 KLSVCKVDIGKSEAIQIVCGAKNIRSGIHVLVATEGTYLKDIDLTIKTSHLRGQISQGMI 120 Query: 119 CSEKELML---SDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL L +D A + E+ I P +G L L + I D+++T NR D + + GI Sbjct: 121 CSLSELGLPPNNDGIAILEEMNIAIPKIGVCPKKQLGLDEIIFDLAITANRPDGLSMVGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFA-------MCCVKGVR- 226 A ++ A KLK L + + + + D + K FA + + + Sbjct: 181 AREVSAINNTKLK-------LPAIDLLHKDYKEFDHNVESKKFASRNEVYSLNLIDNLNG 233 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV---------LT 277 NN + ++ RL+ G+ SI+A+VD+TNY L++G P H FDA + ++ Sbjct: 234 NNDSSEEVKSRLRNAGINSINAIVDLTNYTMLEQGQPLHAFDADLLCELTGKEVTINDFG 293 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 +R+A +GE ++ +D +Y LS VI I +IAGIIGGK++ + T + +E AL Sbjct: 294 IRKAKTGENLIGIDGIDYSLSSKVDVITCSNIIIAIAGIIGGKNSCVNKETRKIWLEAAL 353 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 + P ++ S + +G T+S RFE+G+ + I ++ ++L+ + I R + Sbjct: 354 FSPSSVRISSREIGKRTESSTRFEKGISPEITISSVERCLNLLTKTFDCQILEKWINREL 413 Query: 398 TYKPRKIVFMNSEVKRLSG-----------------IDVPIEDSLRILER---------- 430 + + ++ ++ + G ID E + L Sbjct: 414 VIEEQLLLLRREKINKTLGKVVEHKTNINAGDNSNNIDKSGESQINTLRNIDDHEIEQSL 473 Query: 431 --LGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKR 486 LG + + + V VP+ R+ D++ + DL+EEI R+ G D+ S P PL Sbjct: 474 ISLGCKLQKDVKGWLVEVPANRKLDLKREIDLIEEISRLIGYDRFDSNLPNPLR----PG 529 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT 546 L+ +Q R V+ L S EVV S ++K+Q + ++ I NP+ ++ S++RT Sbjct: 530 GLTPKQKIERKVRESLTSVGFQEVVTLSLVAKDQY-----SKNQVAISNPLLSETSHLRT 584 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLW 605 +L L RN+ I+E+ +Y D+ + + G G+ I G+ W Sbjct: 585 NLWQEHLNICQRNMAYEQKGCWIYEIGKIYNIDSGRINETSLLCGALVGNKSI---GQ-W 640 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 ++E + +D F ++ S + +++ + + HPG+S ++K + L Sbjct: 641 --QTETKNSSLDYFQSRGILHSALNSLNINITDEKLDEN--QLLHPGKSSMLKLEGK-EL 695 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDLAFI 723 G+FGE HP+ L + PI FE+ + I S ++ K ++ ++RD+A + Sbjct: 696 GFFGELHPSKLSDLNIDYPIYIFELNFNLILQSSTRKNKLNISFKQFPTVPSMERDIALL 755 Query: 724 VDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 VD +I + + N+I R L++D + D ++G ++ +GK S A ++ + KDT ++++ Sbjct: 756 VDNNIQSLDISNLIIKTGRPLVEDAYLIDRYEGDNIPKGKVSQAFRIRYRKNKDTLKEEE 815 Query: 783 IRILMDRIVENVVKKTNAVLRS 804 + + D+I E + + +A LRS Sbjct: 816 VSPIHDKIREKLKVEFSAELRS 837 >gi|330444167|ref|YP_004377153.1| Phenylalanyl-tRNA synthetase beta chain [Chlamydophila pecorum E58] gi|328807277|gb|AEB41450.1| Phenylalanyl-tRNA synthetase beta chain [Chlamydophila pecorum E58] Length = 792 Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 211/825 (25%), Positives = 389/825 (47%), Gaps = 70/825 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 M LS L+ + + ++ + IG+E E ++ + S K+L V +P+ D Sbjct: 1 MHVPLSLLQTYFSAPLRIKDLLSACDRIGIEAEVHIETSASFSSVITAKILQVCPHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIESTG 116 + QE Q+VCGAPN R G++ A PG+ + + N + + KIRG+ES G Sbjct: 61 KLKVATLFDGSQEYQIVCGAPNCREGIVVPLALPGAKLTDSQGNVLTIKKSKIRGVESQG 120 Query: 117 MMCSEKELMLSDD--SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 M C EL L ++ + ++EL D P+G ++ S+ I+++SLTPN C + G+ Sbjct: 121 MCCGADELGLPEELVTHGLLELANDTPLGEDVATIF--SETILEISLTPNLGHCASLFGL 178 Query: 175 ALDL---VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A ++ +A L KE ++ + +PL+ +D S+C F + G+ + + Sbjct: 179 AREISHVTSAALTLPKEFSL------QPMPLQEVPSRNDFSVCPLFCYIKISGIPPASPS 232 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS----DVLTVRRACSGEK 286 P ++ L+++ +S++ALVD+TNY+ G P H +DA + V ACS Sbjct: 233 PAHLQNALRSLKQKSVNALVDVTNYLMFSLGQPLHAYDARSVHVGSLHVQYTESACS--- 289 Query: 287 ILALDNQEYDLSPDNV-VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 L L N E + P V V+ D RI ++AG++G + D TT++++E A + P + R Sbjct: 290 -LTLLNNETVMLPKQVPVVCDDERILALAGVMGSLESAVSDETTEIILEGAYF-PSEVLR 347 Query: 346 SGKNL-GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRK 403 + +NL I +++ YRF RGVD ++P + + + S I + + Sbjct: 348 ASQNLVPIHSEASYRFSRGVDYNNVVPAFFAAIHYLKKMFPEAEFSPIYVMGEAQRTQKT 407 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEE 462 ++ S V+R+ G + + L LGF + E K V +PS+R D++ + DLVEE Sbjct: 408 LLLRASTVERILGETLTTKTIHAKLSSLGFPIREETAKHLRVEIPSYRHDIQREIDLVEE 467 Query: 463 ILRI--YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 + R + V+ K P + + KR+L +LA+ + + + E Sbjct: 468 VFRTQSWHVEARKPTPCYTSIYKLKRHLV----------DLLANSGLQQFFTCDLLKPEL 517 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + L E I S + +R SLLPGLL++T N++R FE+ VY+ Sbjct: 518 AALCDA---EHLITLQGSKHATALRPSLLPGLLESTATNLNRQAGGVYAFELGAVYKKVA 574 Query: 581 PEGQKY-----MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VS 634 + Q+ + +G + S + G L F K+ ++ +S Sbjct: 575 SQYQETQTLSILLSGQAEAPSWLPSQGPL------------SFFSIKSWIEKILNHLGIS 622 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + E +++HP + G+++ LG G HP + + +P+ E+ +D + Sbjct: 623 SQAYTLEPSNHAYFHPYQQGLLRLHKH-TLGILGTVHPKLTKKMQIKHPVFFGELSVDLL 681 Query: 695 PISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDV 752 QKK T ++ V + ++P RD+ V + +PA L ++++ + ++ V++ + Sbjct: 682 NQGQKK-TSSQYVPY--PIYPSSFRDVTLAVPEELPADALRKELLRSPSKWLERVSIISI 738 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 +Q K+ +K V+++++ Q K T + +I +R+V + ++ Sbjct: 739 YQNKASSNQEKHVSLRLVFQDRKRTLSNQEIDEEYERLVSGLTQR 783 >gi|332654144|ref|ZP_08419888.1| phenylalanyl-tRNA synthetase, beta subunit [Ruminococcaceae bacterium D16] gi|332517230|gb|EGJ46835.1| phenylalanyl-tRNA synthetase, beta subunit [Ruminococcaceae bacterium D16] Length = 803 Score = 254 bits (648), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 196/680 (28%), Positives = 329/680 (48%), Gaps = 46/680 (6%) Query: 139 DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSE 198 D G L + D +++ +TPNR DC+ V G+A + A L + ++ Sbjct: 155 DCNPGDDLKPVIGADDHVVEFEITPNRPDCLSVIGLAREAAATFNAPLTLHDPVVKGGAD 214 Query: 199 SIPLEI-KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVS 257 +E+ + S LC+ + V+ V+ +P WMR+RL+A+G+R I+ +VDITNYV Sbjct: 215 GNLMELLDVETPASDLCQRYTARMVRNVKIAPSPKWMRERLRAMGVRPINNIVDITNYVM 274 Query: 258 LDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGI 316 L+ G P H FD + + VRRA GE++ LD Q L+ +++VIA + R +AGI Sbjct: 275 LEYGQPMHAFDYRYVKGGKIIVRRAEEGEELTTLDGQVRKLTANHLVIADETRAVGLAGI 334 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 +GG+++ +T DV+ E A +D I + LG+ T++ +FE+G+D +P + Sbjct: 335 MGGENSEIVSDTVDVVFESACFDGTCIRKGALALGMRTEASAKFEKGLDPLNTLPAVNRA 394 Query: 377 VSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 L+ L G D I N +PR + ++ L G D+ + + IL++L F V Sbjct: 395 CELVEMLGAGEVLDGTIDILNYVPQPRVLKLEPEKINALLGTDISEAEMVSILKKLDFQV 454 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL---SLQQ 492 G+ +V+VPSWR DV ADL EE+ R +G + I P T + + L S ++ Sbjct: 455 EGD----QVTVPSWRGDVIGMADLAEEVARFHGYNNI-----PTTLMRGQTTLGGFSEEE 505 Query: 493 SRTRYVKRVLASRAMMEVVNWSFIS-----KEQSVLFGGGQRELEILNPISADMSNMRTS 547 R + + S E++ +SFIS K + + +ILNP+ D S MRT+ Sbjct: 506 KLERQLGSMCRSMGFDEIITYSFISPTCYDKIRWAADDARRESFKILNPLGEDTSIMRTT 565 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSD 607 +LP +L+ RN + + ++EV +Y P G+ +A + S G G Sbjct: 566 VLPSMLEILTRNYNYRNQNVRLYEVGRIY---LPGGEDGLAVENKILSMGAYGED----- 617 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRF---ESGAPSWYHPGRSGIIKTSAEIVL 664 +D + K ++++ + D +RF PS YHPGR + E + Sbjct: 618 --------MDFYTLKGCVEAILKDLRASD-VRFVVPNETNPS-YHPGRVADVYV-GERRI 666 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G G+ HP + +G E+ L+++ + + V L V RD+A + Sbjct: 667 GVMGQVHPLVAQNYGADAQFYCAELELNAL---MAAKGADPEYVPLPKFPAVTRDIAVVC 723 Query: 725 DQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 D+ + G L + I K L+ D +FD+++GK + EGKKSVA ++++ + ++ Sbjct: 724 DEAVTVGALEDCIRKGAKGLLKDCKLFDIYRGKGVDEGKKSVAFSLVLRADDRSLTSEEA 783 Query: 784 RILMDRIVENVVKKTNAVLR 803 + I+ + K AVLR Sbjct: 784 DEDVKSILAALEKDLGAVLR 803 >gi|213581886|ref|ZP_03363712.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 429 Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 149/421 (35%), Positives = 242/421 (57%), Gaps = 8/421 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLS 415 +R+ERGVD ++ L+L +CGG A I N P++ I S++ RL Sbjct: 358 HRYERGVDPALQYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLI 417 Query: 416 G 416 G Sbjct: 418 G 418 >gi|75761060|ref|ZP_00741059.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491444|gb|EAO54661.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 532 Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 164/532 (30%), Positives = 282/532 (53%), Gaps = 16/532 (3%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58 M + WL++++D DV+ +++ D +T G+EVE V+ + + + VL E++P+ Sbjct: 1 MFVSYRWLQEYVDIKDVTAQELADKITKSGIEVEGVEVLNKGVKGVVVGHVLECEKHPEA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ID G+ + +Q++CGA N+ GL A G+ +P N + K+RG S GM Sbjct: 61 DKLSKCLIDIGEEEPVQIICGAANIAKGLKVPVAKVGAVLP-GNFKIKKAKLRGEASHGM 119 Query: 118 MCSEKEL-----MLSDDSA-SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +C+ +EL ++S + A I P DA VG + L L D ++++ LTPNR+DC+ + Sbjct: 120 VCALQELGIDGKLVSKEYADGIFIFPSDAEVGADALEILNLHDEVLELGLTPNRADCLNM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A ++K I ++E I ++ + VK V+ +P Sbjct: 180 LGVAYEVAAIYGREVKLPAIDLQETAEKTSDYISVSVEAKEENPLYIAKMVKNVKIGPSP 239 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILAL 290 WM+ RL A G+R IS +VDITNY+ ++ G P H FD ++ S + VR A GEKI L Sbjct: 240 MWMQTRLMAAGIRPISNVVDITNYILMEYGQPLHAFDYDKLGSKEIVVRLAKEGEKIETL 299 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D+QE L ++VI + + ++AG++GG + + T +VL+E A + + R+ K+L Sbjct: 300 DDQERTLQSHHLVITNGTKALAVAGVMGGADSEVTNETVNVLIESAYFAGQTVRRTSKDL 359 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNS 409 G+ ++S RFE+G+D ++H +L+ GG A + + A N+ + R + Sbjct: 360 GLRSESSARFEKGIDPTRTFEAIQHAAALMAKYAGGEALEGVVEADNLQIQERTVSVTAE 419 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +V R+ G ++ + + L F F V+VP+ R D+ DLVEE+ R+YG Sbjct: 420 KVNRVLGTNISASEMGTMFANLKFPFTEVEGTFHVNVPARRPDITISEDLVEEVGRLYGY 479 Query: 470 DQIKSEPLPL-TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 D I P+ L + + L+ Q++ R V+R L + E + +S S ++ Sbjct: 480 DHI---PVTLPSGTMTRGKLTSAQTKRRKVRRFLEGAGLYEAITYSLTSADK 528 >gi|289806816|ref|ZP_06537445.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 526 Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 176/547 (32%), Positives = 275/547 (50%), Gaps = 33/547 (6%) Query: 249 LVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 +VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L+ D +VIA Sbjct: 1 MVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATLNADTLVIADHH 60 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQG 368 + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ +R+ERGVD Sbjct: 61 KALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDASHRYERGVDPAL 120 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLR 426 ++ L+L +CGG A I N P++ I S++ RL G + E Sbjct: 121 QYKTIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLIGHHIADEQVSD 180 Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP---LTQVE 483 IL RLG V D+++ P+WR D+E + DLVEE+ R+YG + I EP+ + Sbjct: 181 ILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTH 240 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSN 543 + +LSL++ VK +L + EV+ +SF+ + L G L + NPIS +MS Sbjct: 241 READLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSA 295 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAGIRKGSSGIE 599 MR SL GLL N +R IFE + DT Q M AG+ G+ E Sbjct: 296 MRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDE 355 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 W+ E VD +D K D +V++ L ++F++ HPG+S I Sbjct: 356 H----WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLK 407 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKKVVHLSSLHPVK 717 E + G+ G HP + L+ FE+ + + I + R +S + Sbjct: 408 DERI-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR-------EISRFPANR 459 Query: 718 RDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD+A +V +++PA +++ K + V +FDV++GK + EG KS+AI +++Q Sbjct: 460 RDIAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNR 519 Query: 777 TFRDDDI 783 T +++I Sbjct: 520 TLEEEEI 526 >gi|229895114|ref|ZP_04510290.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia pestis Pestoides A] gi|229701876|gb|EEO89899.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia pestis Pestoides A] Length = 423 Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 143/406 (35%), Positives = 234/406 (57%), Gaps = 6/406 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ VD + + V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDDLAHQITMAGLEVDGVDAVAGEFNGVVVGHVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKIDVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGESSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD I+ELP DAP+G + +YL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELAISDDHDGIIELPADAPIGVDVREYLHLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E +++ ++S + L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVVNQLPLTEPDMAEVVASINDTLPIRVDAPQA--CPRYLGRVVKGINVKAATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI +VD+TN+V L+ G P H FD RIS + VR A GE++ LD + L Sbjct: 238 LRRCGIRSIDPVVDVTNFVLLELGQPMHAFDLDRISGGVIVRLATDGEELTLLDGTKAKL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 +R+ERGVD ++ L++ +CGG A + + P++ Sbjct: 358 HRYERGVDPALQHKAIERATHLLIDICGGEAGPVVDVTTASELPKQ 403 >gi|225025894|ref|ZP_03715086.1| hypothetical protein EUBHAL_00122 [Eubacterium hallii DSM 3353] gi|224956791|gb|EEG38000.1| hypothetical protein EUBHAL_00122 [Eubacterium hallii DSM 3353] Length = 808 Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 223/851 (26%), Positives = 384/851 (45%), Gaps = 105/851 (12%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEK-VDNREALSPFTIVKVLSVERNPDL 58 M +SW+K ++ D D ++++ D +T G VE V + L + ++ +E++PD Sbjct: 1 MNTPISWIKAYVPDLDCTVQEYVDKMTLSGSHVENAVYLDKNLEKIVVGRIEKIEKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLG---------VWAPPGSCIPENNMIVNVRK 108 D I +++ G +E+Q+V GA NV G + GS PEN + + K Sbjct: 61 DKLVICQVNVG-DEEVQIVTGASNVFKGAMVPVVLDGGRVAGGHDGSPNPENGIKIKKGK 119 Query: 109 IRGIESTGMMCSEKELMLS--------DDSASIMELPIDAPVGGRLSDYLELSDPIIDVS 160 +RG+ S GMMCS +EL + +D I + D G L L D +++ Sbjct: 120 LRGVPSYGMMCSIEELGSTRDMYPEAPEDGIYIFDESKDVKPGDDAVAALGLRDAVVEFE 179 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 +T NR DC + G+A + A + ++E I +++ + LC + Sbjct: 180 ITSNRVDCFSMIGMAREAAATFEKPFYAPEVKEVGNNEKAEDYISVEVEATDLCPRYTAR 239 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVR 279 VK ++ +P WM++RL A+G+R I+ +VDITNYV + G P H +D ++I + V+ Sbjct: 240 IVKNIKLAPSPEWMQRRLAAMGIRPINNIVDITNYVMEEYGQPMHAYDLNKIRGHKIVVK 299 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 RA G+ LD QE L D ++I IAGI+GG+++ D+ +L E A +D Sbjct: 300 RANDGDVYTTLDGQERKLDKDVLMINDAEGPVGIAGIMGGENSMVTDDIQTMLFEAATFD 359 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT- 398 NI S K +G+ TD+ +FE+G+D + + + L+ L G + Sbjct: 360 GTNIRLSSKRIGLRTDASGKFEKGLDPENALEAINRACQLVEELGAGEVVGGVVDVYPNP 419 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEK 456 + KI F ++ +L G +V E + +RL YDK + +PS+RQD+ Sbjct: 420 VEDVKIPFEPAKYNKLLGTNVSEEKMMEYFDRLEIG----YDKETNMLLIPSFRQDLRCS 475 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 AD+ EE+ R +G D I + +L K+ A+R V+N + Sbjct: 476 ADIAEEVARFFGYDNIPT--------------TLPHGEATAGKKSFAARVEDVVMNIA-- 519 Query: 517 SKEQSVLFGGGQRELE---------------------ILNPISADMSNMRTSLLPGLLKA 555 EQ+ GG E I NP+ D S MRT L G+L + Sbjct: 520 --EQNGFCGGMCYSFESPKVFDKLLLADNDPLRQAIVIANPLGEDYSIMRTIELNGILTS 577 Query: 556 TGRNVDRAIADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS 609 N + + ++E+ +VY + P+ +K + G+ G + K Sbjct: 578 LAGNYNHRNKNVRLYEIGNVYLPKALPLTELPDERKRLTLGMY-------GECDFFMLKG 630 Query: 610 EERCRFVDL-FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 F+ L D K D EP S + HPGR +I G+ G Sbjct: 631 VLEEMFLKLGLDGKVD----FEP----------SQEKPFLHPGRQALIYVGGAYA-GFIG 675 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 + HP + + + + C E Y+ I P +K T ++ ++ V RDL+ ++ + Sbjct: 676 QVHPEVCENYDMK---C--EAYVAGIDLPTVTEKATFDRRYEGVAKYPAVNRDLSLVMKK 730 Query: 727 HIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 + G+L ++K +L++ + +FDV++G + EG KSVA ++ + + + +I Sbjct: 731 DVFVGSLEKVMKEKGGKLLESIQLFDVYEGSQIEEGYKSVAFSLVFRSPERSLEAAEINK 790 Query: 786 LMDRIVENVVK 796 ++D+I++ + K Sbjct: 791 IVDKILKELEK 801 >gi|325067185|ref|ZP_08125858.1| phenylalanyl-tRNA synthetase, beta subunit [Actinomyces oris K20] Length = 718 Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 190/630 (30%), Positives = 307/630 (48%), Gaps = 63/630 (10%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H+D T +S E++ L +GLE E++ P + KVL+ E + + Sbjct: 6 IEWLREHVDVPTGLSAEQLAADLVRVGLEEERIVPPAVTGPLVVGKVLTREAKEQSNGKV 65 Query: 63 L---RIDTG-KHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + R+D G +H + +VCGA N VG V PG+ +P + + Sbjct: 66 INYCRVDVGPEHNDAPGTGKEPSDLPSRGIVCGAHNFDVGDYVVVCLPGAVLP-GDFRIA 124 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPI----------DAPVGGRLS-DYLELSD 154 RK G S GM+CS +EL + +D + I+ L + P G + L L + Sbjct: 125 ARKTYGHVSDGMICSARELGIGEDHSGIIVLQQWLAEHGHEGEEPPAPGTDAIGILGLGE 184 Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKE----INISCPLSSESIPLEIKFDL-- 208 I+++++TP+R C +RG+A + + + + N + + + +D+ Sbjct: 185 EILEINVTPDRGYCFAMRGVAREYSHSTGARFTDPADATNTGLYPNGVAGAGQGGYDVVV 244 Query: 209 -DDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDR 260 +D G C V+G+ + +P WM+ RL A G+R IS VD+TNYV LD Sbjct: 245 PEDPRPIHGRPGCDRYVARLVRGIDPSAPSPTWMQDRLTAAGMRPISLAVDVTNYVMLDL 304 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA----SDG-RIQSIAG 315 G P H FDA +++ + VRRA GE++ LD L P+++VI+ S+G R +AG Sbjct: 305 GQPLHAFDAGKLTAPIVVRRAKDGERLTFLDEVTRTLDPEDLVISDSPESEGSRALVLAG 364 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 + GG + D +T DVL+E A +DP+++ARS + + T+S R ERGVD + + Sbjct: 365 VFGGALSEVDADTRDVLIEAAHFDPVSVARSSRRHKLPTESSKRNERGVDTELAPIAAQR 424 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 V L++ GGTA + N T P I +RL+G+ E +L +G +V Sbjct: 425 AVDLLVEYGGGTAEPVATDINRTRAPEPITMRADAAERLTGVAYGTERVTELLTTIGCTV 484 Query: 436 I--GEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS 489 G D V+ P+WR D+ A L EEI R+ G D I P+ + LS Sbjct: 485 ERDGSADDGTALLTVTPPTWRPDLVGSAHLAEEIARLDGYDAI---PVIVPTALAGTGLS 541 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMR 545 Q R + R LA + +V+++ FI + +L ++ + + NP++ D +R Sbjct: 542 ADQKARRDIVRALADAGLTQVLSYPFIGEVHDLLEIPADDARRQRVRLANPLAEDAPYLR 601 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 TS+L L+ T RNV R + D A+FE+ V Sbjct: 602 TSVLDSLVDVTRRNVSRGLTDVAVFELGSV 631 >gi|158313570|ref|YP_001506078.1| phenylalanyl-tRNA synthetase subunit beta [Frankia sp. EAN1pec] gi|158108975|gb|ABW11172.1| phenylalanyl-tRNA synthetase, beta subunit [Frankia sp. EAN1pec] Length = 865 Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 194/627 (30%), Positives = 310/627 (49%), Gaps = 59/627 (9%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVE----RNPDLD 59 +SWL++ + + + D L G EVE ++ L+ + +VLS+E + D+ Sbjct: 1 MSWLREQVGGLPPAKAVADALIRAGFEVEGLETVGGDLAGVVVGEVLSIEVVAAKKKDVR 60 Query: 60 -CAILRIDTGK--------HQEIQ-----VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 C + + G+ +E + +VCGA N VG A PGS +P ++ Sbjct: 61 FCRVRVAELGEPGGPVASGAEEAEPGVRGIVCGAFNFEVGDRVPVALPGSVLP-GGFEIS 119 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 RK G S GM+CS +EL L +D + I+ LP + +G +++ L L D ++D+++TP+R Sbjct: 120 SRKTYGHVSDGMICSARELGLGEDHSGILVLPAGSRIGTDVAELLGLGDEVLDIAVTPDR 179 Query: 166 SDCIGVRGIALDLVAA--------GLGKLKEINISCPLSSESIPLEIKFD-------LDD 210 + VRGIA + A G E + S+ + D ++D Sbjct: 180 GYGLSVRGIARESATAFGLPFDDPGAWGSDEPAATGAGSATAGSTTGAGDAAGYPVRVED 239 Query: 211 SSLCKGFAMCCVKGV--RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 + C + V V +W R RL G+R ISA VD+TN + L G P H FD Sbjct: 240 TVACDRYVARTVSDVDPAARTPLDWSR-RLSLAGMRPISAPVDVTNIIMLGLGQPLHAFD 298 Query: 269 ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 ++++ + VRRA +GE++L LD + +L P+++VIA D ++AG++GG T Sbjct: 299 RAKLTGPIVVRRARAGERLLTLDGVDRELDPEDLVIADDSGPIALAGVMGGAATEISAAT 358 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGGT 387 TD+++E A +D + +AR+ + + +++ RFERGVD + PV + V L+ L G T Sbjct: 359 TDIVLESAHFDAVTVARTARRHRLGSEASRRFERGVD-PALAPVAAQRAVDLLRELAGAT 417 Query: 388 ASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG-----------FSVI 436 A + P IVF E +RL+G P + R L +G Sbjct: 418 AEPGVTDVDHRAAPEPIVFPLGEPERLAGRPYPADAIRRRLADVGCLLRDPEPAEAAGSP 477 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 GE + V+ PSWR D+ ADLVEE++R+ G D I P+ L + R L+ Q R Sbjct: 478 GEPGELLVTAPSWRPDLLRPADLVEEVVRLEGYDTI---PVTLPLLPAGRGLTAAQQMRR 534 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFG---GGQRE--LEILNPISADMSNMRTSLLPG 551 V R LA+ +EV+ F++++ + G G +R + + NPI+ D S +RT+LL G Sbjct: 535 AVGRALAADGFVEVLTLPFVAEDAADALGLPAGDERRAAVRVANPIAQDASYLRTTLLSG 594 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYEN 578 L+ A RN+ R D A+FE V+ Sbjct: 595 LIAAAVRNLGRGQTDLALFESGLVFRE 621 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 3/158 (1%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR + +V G GE HP +L GL C E+ LD++ I Sbjct: 710 WHPGRCAELSVDGRVV-GSAGELHPRVLGSAGLPARTCAMELDLDAL-IGAALERPPVAA 767 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S+ P RD+A + + + ++ L++ +++FDV++G +G ++S+A Sbjct: 768 PAISTFPPADRDVALVTAVDVSVSAVTEALRAGAGDLLEALSLFDVYEGDQVGPDRRSLA 827 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + ++ T + D V +T AVLR Sbjct: 828 FGLRLRAPDRTLTAAEANDARDAAVAEATSRTGAVLRG 865 >gi|160947524|ref|ZP_02094691.1| hypothetical protein PEPMIC_01458 [Parvimonas micra ATCC 33270] gi|158446658|gb|EDP23653.1| hypothetical protein PEPMIC_01458 [Parvimonas micra ATCC 33270] Length = 788 Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 215/829 (25%), Positives = 402/829 (48%), Gaps = 68/829 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV----DNREALSPFTIVKVLSVERNP 56 M + W K+++D + + ICD +T G VE + DN + + I+ + E + Sbjct: 1 MLLPIKWAKEYVDINDDIMNICDKVTLTGSHVESIIKLGDNIDNIVVGKIIDIYRHENSN 60 Query: 57 DLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L I ++D G ++ +Q+V A N++ A S + +N I K+ G S G Sbjct: 61 KL--WITKVDLG-NEIVQIVTAAQNLKQFDYVPVAKVNSTLSDNTKIKEA-KLAGEISQG 116 Query: 117 MMCSEKELMLSDD-------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 M CS KEL D + + + +G + + L+L D +++ +TPNR DC+ Sbjct: 117 MFCSYKELGYPDSVIPKEYKDGVLRIIDENTVLGTDIREVLDLDDTVVEFEITPNRPDCL 176 Query: 170 GVRGIALDLVAAGLGKLKEINISC--PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + G+A ++ A+ KL IN+ + ++S+ L I DD CK ++ VK V Sbjct: 177 SIVGMAREIAASFDKKLNPINVKNLKEIENKSL-LNITIHSDD---CKRYSASIVKDVTI 232 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 + ++ L G+R ++ +VD+TN++ L+ G P H FD ++ +++R A GEK+ Sbjct: 233 KESARKVQNYLLNSGIRPVNNIVDLTNFLMLELGQPLHAFDLDKLEGNISIRNAFEGEKV 292 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ E LS ++++I D + +IAG++G K++ D+NT ++ +E A + I + Sbjct: 293 VTLDDVERTLSSEDMLICDDVKPIAIAGVMGLKNSEIDENTKNIFIESAFFTKKTIKSTS 352 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFM 407 K LG+ +++ R+E+G+ + + VL + L+ I + I F Sbjct: 353 KRLGLKSEASIRYEKGLTSEHTMNVLARFLCLLEKNVKCKIDSIFDVNKEETTSKLIEFD 412 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 + VKRL G+++ D + L+ L + D ++P +R D+ + D+VEEI R+Y Sbjct: 413 TNLVKRLLGVEIKNSDIITYLDLLEIKTEVKGDVIICTIPYFRTDLVIQEDIVEEIGRLY 472 Query: 468 GVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS----KEQS 521 G + P+ P T + L+ +K +L + + E+ +SFI K+ Sbjct: 473 GFCNLNPTPILAPNTIGRKSKKRILEDK----IKNILLNLRLYEITTYSFIGGSIIKKSK 528 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS---HVYEN 578 + Q ++ILNP+ + S MR SL+P +++ +N++ D ++E+ H EN Sbjct: 529 M---NTQNTVKILNPLGEEFSIMRKSLIPNIIEVLSKNLNYKNEDLLVYELGNTFHTVEN 585 Query: 579 -DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 + P +K + G S + F + D + +V+ ++ + Sbjct: 586 YEVPLEKKRLVIG------------------SYGKYDFYYIKDVIINLFNVL----NIKN 623 Query: 638 LRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + F ++ ++HPG I + E V G G+ ++ F + I E+ ++ I Sbjct: 624 IEFIKNNCIDYFHPGVCADILANGEKV-GEIGQISYDVCKNFSIKKNIFVCEIDIEKI-- 680 Query: 697 SQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQ 754 + + K+ +P VKRDLA IVD+ I +G + I N + L+ ++ +FD++ Sbjct: 681 --RDKVSLIKIYEPIIKYPAVKRDLAIIVDKDIDSGRIEKIFKNNSNNLLKNIELFDIYT 738 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G + +GKKS+A ++ Q + T D+DI L+D ++ ++ ++ A LR Sbjct: 739 GNQINKGKKSMAYKLTFQSKEKTLVDEDINSLIDNMLFDLKEQLGAYLR 787 >gi|323220240|gb|EGA04695.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 391 Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 142/394 (36%), Positives = 231/394 (58%), Gaps = 6/394 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVAATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 +R+ERGVD ++ L+L +CGG A I Sbjct: 358 HRYERGVDPALQYKAIERATRLLLDICGGDAGPI 391 >gi|227505053|ref|ZP_03935102.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium striatum ATCC 6940] gi|227198354|gb|EEI78402.1| phenylalanyl-tRNA synthetase subunit beta [Corynebacterium striatum ATCC 6940] Length = 698 Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 181/602 (30%), Positives = 291/602 (48%), Gaps = 31/602 (5%) Query: 1 MKFTLSWLKDHLDTD-----VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVE- 53 M + SW+ L V+ E++ +G E E +N E P I KV +E Sbjct: 1 MLISQSWVTGLLGAKNPGWKVTPEELDSGYVRVGFETEGYENLPETTGPLVIGKVEEIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + D E+Q ++CGA N R+G V A PG+ +P + R+ Sbjct: 61 LTQFKKPIRYCQVNVGDANGTGELQGIICGARNFRLGDHVVVALPGAELP-GGFKIAARE 119 Query: 109 IRGIESTGMMCSEKELMLSDDSASIMEL--PIDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 S GM+CS EL ++ S I+ +G + L+D + DV++TP+R Sbjct: 120 TYDHISNGMLCSAAELGFAEKSDGIITFGEEYGQYIGQDARKLIALADTVFDVNITPDRG 179 Query: 167 DCIGVRGIALDLVAAGLGKLKEINISCPLSS---ESIPLE----IKFDLDDSSLCKGFAM 219 + RG+ ++ +A + ++ ++ +P I DL + + + F + Sbjct: 180 YALSARGLTREIASAFNLEFADVAQDPSVAGIDVSGVPTPEGGLINIDLREETKAQRFGL 239 Query: 220 CCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 V G+ N P WM + L G R+++ D+TNYV L G P H FDA+ + L V Sbjct: 240 RKVSGIDPNARTPFWMERELMLSGQRAVNPATDVTNYVMLLLGAPMHAFDANLVKGGLVV 299 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 R A GEK LD+ + LS +VVI D IQS+AG++GG D TTDV E A+W Sbjct: 300 RNAEEGEKFETLDHVKRTLSAGDVVICDDNGIQSMAGVMGGTSTEIIDETTDVYFESAIW 359 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 DPI +AR+ + + +++ RFERGVD + L +L++ + GGT Sbjct: 360 DPITVARTSRRHKLSSEASRRFERGVDPAIVEVALDVACALLVEIAGGTIESGRTLVGDV 419 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 KP++I S+ +G++ E ++ L +G +V + + V+ +WR D+ D Sbjct: 420 AKPQQITMRASKPSEYAGVEYSRETIVQRLREVGCTVEEQGENLLVTPATWRTDITMDVD 479 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 L+EE+LR+ G++ I P L R L+ Q R R + LA EV+ FI+ Sbjct: 480 LIEEVLRLEGLEDI---PTILPTPVGGRGLTPAQKRRRAIGHGLAYAGYAEVLPSPFIAN 536 Query: 519 EQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 + ++G +R + + NP+ +D + + T+LLP +L+A GRNV R AD A+F + Sbjct: 537 DTFDVWGLDADDDRRRTVSVQNPLESDKAILSTTLLPNMLEAIGRNVARGRADLALFGLQ 596 Query: 574 HV 575 V Sbjct: 597 QV 598 >gi|325849253|ref|ZP_08170689.1| phenylalanine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480197|gb|EGC83265.1| phenylalanine--tRNA ligase, beta subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 737 Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 211/776 (27%), Positives = 369/776 (47%), Gaps = 65/776 (8%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P+ D +L ID G +EI +V A N + G + GS I N ++ GI Sbjct: 1 HPNADKLFVLTIDVG--EEITIVTSAKNTKEGDYLIVIRSGSKI--NGQKIDDHDFFGIV 56 Query: 114 STGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 S GM+ S KE+ D ++ L + G + L + P+I+ +TPNR D Sbjct: 57 SQGMLTSYKEIGYDDSVIEKKSKDGVIVLSGEFKPGTPAVEVLFSNSPVIEYEITPNRPD 116 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIP-----LEIKFDLDDSSLCKGFAMCCV 222 C+ + G+A + A+ K+ P S+ +EIK S CK F + Sbjct: 117 CLSIIGMARESAASFDKKITYPLTEYPTVSDKKDQYFNGIEIK-----SKNCKRFTGRII 171 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRA 281 K V+ +P W++ L G+R ++ +VDITN+V L+ G P H +D + D + VR A Sbjct: 172 KNVKIGESPQWLKNCLMLAGMRPVNNVVDITNFVMLETGQPLHAYDLETLHDRKIIVRDA 231 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 GE I LD +E L+ + +VI+ +AGI+G + ++T +L+E A +D Sbjct: 232 KEGEVIKTLDGEERKLNEEVLVISDGKEAIGLAGIMGSMDSEITEDTKTILLEAANFDSD 291 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 NI +S K L + +++ RFE+ + ++ K + LI L G + I P Sbjct: 292 NIRKSSKFLNLRSEASSRFEKEISVENAEFASKRAMKLITDLGIGQVLEDHFDEGIKESP 351 Query: 402 R-KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADL 459 K+ S + L G + ++++ L+ L F V + D E +P +R D+ +ADL Sbjct: 352 ENKVRLRISRLNSLIGREFLKDEAISYLKSLEFEVKDIDADTIEAKIPDFRMDISIEADL 411 Query: 460 VEEILRIYGVDQIKSEPLPLT-QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS- 517 +EE+ R+YG+ +++S+PL + Q +K ++ L + +K L + E+ +SFIS Sbjct: 412 IEEVARLYGMGKVESKPLYSSLQRGEKTSMRLLKDE---LKNNLFGQKFSEITTYSFISP 468 Query: 518 KEQSVLFGGGQREL----EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 ++ L +L +I+NP+ D S MRT+LL +L +N+ + D +E+ Sbjct: 469 RDYDKLLVDKDSKLRDYIKIINPLGEDYSVMRTTLLSNMLDTFSKNIAKKQKDLRFYEIG 528 Query: 574 HVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 + +D PE ++Y+ G L+ D S F DL D A++ Sbjct: 529 TAFIKGGDDLPEEKQYLTMG-------------LYGDYS-----FYDLKDFFIKAMNK-- 568 Query: 631 PFVSLDSLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 RFE+ +HPGR I + + G G+ +++ F + NP E+ Sbjct: 569 --TGFRGFRFETEENIKTFHPGRCANIYLDGQKI-GIMGQISYEVMEEFKIKNPALALEI 625 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVT 748 L I + K+ K LS + RD +F D+ + + ++ + II+ D L+ ++ Sbjct: 626 NLSMI---KDKKIDQVKYKALSKFPSILRDYSFTCDRDVESQSIEDKIIEKADGLVRNIE 682 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FD++ G + +GKKS++ +V T +D++++ + +E++ K+ N LRS Sbjct: 683 IFDIYTGDQIDQGKKSISYKVAYGKNDATLKDEEVQKIEKAFLEDLSKE-NINLRS 737 >gi|254821229|ref|ZP_05226230.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium intracellulare ATCC 13950] Length = 639 Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 188/604 (31%), Positives = 308/604 (50%), Gaps = 40/604 (6%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ ++ DV+ ++ L IG EVE+V + P T+ +V +E Sbjct: 1 MRVPYSWLREVVNAGAPVWDVAPAELEQALVDIGHEVEEVLPLGPVEGPLTVGRVTDIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P C +D G+ ++ ++VCGA N G L V A PG+ +P + RK Sbjct: 61 LTGFKKPIRFC---HVDVGEDKDREIVCGATNFVAGDLVVAALPGTTLP-GGFAIAARKT 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G L L D I +++TP+R Sbjct: 117 YGRTSEGMICSAAELGLGADHSGILVLPPGTAEPGADGHAVLGLDDVIFHLAITPDRGYG 176 Query: 169 IGVRGIALDLVAA-GLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 + +RG+A ++ A L + ++ P E+ PL ++ D + + FA+ V G+ Sbjct: 177 MSLRGLAREVACAYNLDFVDPADVKPLPADGEAWPLTVQPD----TGVRRFALRPVTGIE 232 Query: 227 -NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 V+P W+++RL G+R S VD+TNYV L+ G+P H D +RI+ VR A GE Sbjct: 233 PAAVSPWWLQRRLLLSGIRPTSPAVDVTNYVMLELGHPLHAHDRNRITGGFGVRFARPGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 ++ LD+ E L P +V+I D +I G++G ++TDVL+E A+WDP ++R Sbjct: 293 TVVTLDDIERKLEPADVLIVDDTATTAIGGVMGAASTEVRADSTDVLLEAAVWDPAAVSR 352 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 + + L + +++ R+ERGVD + L +L+ + GG SD + P + Sbjct: 353 TQRRLHLPSEAARRYERGVDPAISVAALDRCATLLAEIAGGAVSDTLT--DWRGDPPRDE 410 Query: 406 FMNSEVK-------RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 + S + R++G+ + + L ++G +V D V+ PSWR D+ + AD Sbjct: 411 WAGSPIDIAADLPGRIAGVAYAPGTAAKRLSQIGAAVAERGDTLTVTPPSWRPDLLQPAD 470 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 LVEE+LR+ G++ I S L R LS Q R R + R LA +E++ F+ Sbjct: 471 LVEEVLRLEGLEVIPSV---LPSAPAGRGLSAVQQRRRAIGRSLAQSGYVEILPTPFLPA 527 Query: 519 EQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 L+G + ++LNP+ AD ++ T+LLP LL+A RNV R + D +++ ++ Sbjct: 528 GVFDLWGLPPDDPRRVTTDVLNPLEADRPHLATTLLPALLEALVRNVSRGLVDVSLYALA 587 Query: 574 HVYE 577 V + Sbjct: 588 QVVQ 591 >gi|301167139|emb|CBW26718.1| phenylalanyl-tRNA synthetase beta chain [Bacteriovorax marinus SJ] Length = 807 Score = 249 bits (636), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 234/800 (29%), Positives = 389/800 (48%), Gaps = 71/800 (8%) Query: 41 LSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE 99 L + ++L +E++P+ D ++ + G + +VVCGA NV+VGL +AP G +P Sbjct: 43 LEKIRVAEILEIEKHPEADKLNLVTFNFGDKENKRVVCGASNVKVGLKTAYAPLGVSLP- 101 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYL-ELSDPIID 158 N +++ +KIRG+ S GM+CSE+EL + DSA I+ELP DAP+G + DY E D I+D Sbjct: 102 NGLVLEPKKIRGVLSEGMLCSEEELGFAQDSAGIIELPSDAPIGQNMIDYYNETKDVILD 161 Query: 159 V---SLTPNRSDCIGVRGIALDLVAAGLGKLKEI-------NISCPLSSESIPLEIKFDL 208 V SLT +R D G G+A + A +LK ++ +S P+ K L Sbjct: 162 VDNKSLT-HRPDLWGHYGLAREFGAIFEQELKNPYNDSWANDLRAKFASGPSPITPK--L 218 Query: 209 DDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 + S CK + V V+ +PNWM++RL +VGLR I+ +VDI+NYV L+ G P H+FD Sbjct: 219 EGESACKAYFGLSVDNVKVEESPNWMKKRLISVGLRPINNIVDISNYVMLELGMPLHIFD 278 Query: 269 ASRISD-VLTVRRACSGEKILALDNQEYDL-SPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 +I D + +++ + + LD ++ +L D V+ +DG + I G++GG +G D Sbjct: 279 RDQIKDNQIIIKKLGTTAEFTTLDEEKRNLIESDTVICDADGPL-VIGGLMGGLSSGVTD 337 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 TT V +EVA W + + LG+ TDS R+E+ +D + + + LIL LC Sbjct: 338 ATTKVFIEVANWHASMVRSTSTRLGLRTDSSQRYEKTLDSKLCERTMLRTLDLILELC-- 395 Query: 387 TASDICIARNITY-----KPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGE 438 + + + Y +I+ + + K+++ G++V E L I L F V Sbjct: 396 --PEAKVVGKLEYDGDDLSAIEILELQTSFKKINKVLGLEVSNERILSIFNALDFKVTAN 453 Query: 439 YDKFEVSVPSWR--QDVEEKADLVEEILRIYGVDQIKSEPL-PLTQVEDKRNLSLQQSRT 495 D V++PS+R +D++ +ADL+EEI RI G D I +P+ P +E R S Q Sbjct: 454 GDDLSVTIPSYRSTKDIDCEADLIEEIGRIIGYDNI--DPISPKLTIEPVRLTSAQALHR 511 Query: 496 RYVKRVLASRAMMEVVNWSFI-SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLK 554 + ++ + EV ++ I K S Q L +LN IS D S MR S++P L Sbjct: 512 KLRDFLVYNMNSFEVNSYPLIGEKLLSKCSWPTQSGLNLLNSISKDHSIMRDSIVPNALA 571 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 NV + DF+ FE+ Y D K + E S + + S+E Sbjct: 572 IAATNV-KNYDDFSFFEIGRTYHLD-------------KANFAAEKSELIIAMYSKESTP 617 Query: 615 FVDLFDAKADALSVIE-PF-VSLDSLRFESG--APSW--YHPGRSGIIKTSAEIVLGYFG 668 F+DL + + L+ PF +S +F++ + W HP I+ ++ G Sbjct: 618 FMDLVNGTSRLLNASNIPFDLSERHPKFKNELISEEWVGVHPFEFYNIRIMGKMK-GVIT 676 Query: 669 EFHPNILDFFGLSNPICGFEVYL---DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 HP IL + + + V L +S P+ K + + LS D + Sbjct: 677 SIHPLILKQYKIKGHLSIAVVDLSQVESRPLKDKVKYRP-----LSKFPSSTFDCTVVTG 731 Query: 726 QHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 +H P +++ +K + + + V D+F ++ +K++ ++ + + T + I Sbjct: 732 EHTPVSEVLSSLKKIKIKELQSTKVVDIF---TMDTKEKAITLRSVFMDEEKTLDGEFIT 788 Query: 785 ILMDRIVENVVKKTNAVLRS 804 +IV N ++K L+S Sbjct: 789 QSSQKIV-NELQKAGFPLKS 807 >gi|326201783|ref|ZP_08191654.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium papyrosolvens DSM 2782] gi|325988383|gb|EGD49208.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium papyrosolvens DSM 2782] Length = 793 Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 232/833 (27%), Positives = 409/833 (49%), Gaps = 70/833 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPD- 57 MK +L+W+KD++D + + ++++ T EVE V+ + + + KVLSV +P+ Sbjct: 1 MKISLNWIKDYVDLEGIDIKELWYRFTMSTAEVEDVEFVGQDIKNVVVAKVLSVNPHPES 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC---IPENNMIVNVRKIRGIES 114 I ++D+G IQ+VCGAPNV G+L G IP+ + K+ G+ES Sbjct: 61 KKLKITQVDSGDGV-IQIVCGAPNVAEGILVPLVKIGGSVCKIPK----IGKAKLVGVES 115 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII---DVSLTPNRSDCIGV 171 GM+CS EL +SDD + ++ L D G + +++ D II + SLT NR D G Sbjct: 116 FGMLCSASELGISDDHSGLLVLEGDYAPGTDIKSIIDIDDVIIEIDNKSLT-NRPDLWGH 174 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A +LK +N+ SE ++ ++D+ C ++ + GV+ P Sbjct: 175 YGIAREIAAIYGRELKPMNLDSLEGSED-KAKLDITVEDTEKCLRYSGLKIDGVKKLETP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 M+ RL G+RSIS LVD+TNY+ L+ G P H FD+ ++ + VR LD Sbjct: 234 MNMKVRLFYCGMRSISPLVDLTNYLMLEMGQPMHAFDSRQVESGIVVRSTKETTPFTTLD 293 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E L D ++I + R +IAGI+GG+++ ++TT +L+E A ++ + +S +G Sbjct: 294 GVERKLPEDALLICTKERPVAIAGIMGGENSEVLEDTTSILLESATFEGSSTRKSSTKIG 353 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT------YKPRKIV 405 + T++ R+E+ +D + ++ V L+ + DI +T +P I Sbjct: 354 LRTEASARYEKMLDPNMTVQAIQRFVKLLRDI----QPDIQFTSALTDVYCNELEPIDIE 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR--QDVEEKADLVEEI 463 + + G + E + IL L F V + D F + VP++R +D+ K D++EEI Sbjct: 410 ITKPYIDKYIGNTLTTEKMVEILRALEFKVDVDGDTFRIKVPTFRATKDITMKVDIIEEI 469 Query: 464 LRIYGVDQIKSEPLPLT----QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 R++G D I+ + L + Q ++R L + +K +L+ R VN S+I + Sbjct: 470 TRVFGYDNIQPQTLDIALKPLQYNEERLLDHK------IKELLSERFGASEVN-SYIWYD 522 Query: 520 QSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + G ++++LNP + D + +R S++PG+L +N ++ DF++FE+ V+ Sbjct: 523 NTFNSRAGIETNAQVKVLNPQAQDSNTLRDSMVPGMLSFAEKN-EKTYDDFSLFEIGSVF 581 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + +T + + I I + ++ KSE+ +LF LS I +L Sbjct: 582 KAETSKEKCEQHKNI-----CILVASKI---KSED-----ELFYELKGMLSFIAK--TLK 626 Query: 637 SLRFESGAPS----WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ FE A + W HP +S + + + +GY HP I G I E+ D Sbjct: 627 NVDFEYTACTSGYNWVHPMKSVDVSYNGNM-MGYIAAVHPMIKKNIGKKLNIAVLEINRD 685 Query: 693 SIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVF 750 + ++K K K+ S +P V D +F+VD + L+ I+ ++++ Sbjct: 686 VLQSIEQKLFKYKE----PSKYPEVLLDYSFLVDNSVTFDKLMQDIRGFKSKVLNGFEFV 741 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++ GK L EGKKS+ + +I + T +DI + ++ N + + LR Sbjct: 742 TIYNGKGLPEGKKSMTFRFVIGSDEKTLSSEDINEFANSLL-NYMAEVGYTLR 793 >gi|227497650|ref|ZP_03927868.1| phenylalanine--tRNA ligase [Actinomyces urogenitalis DSM 15434] gi|226832921|gb|EEH65304.1| phenylalanine--tRNA ligase [Actinomyces urogenitalis DSM 15434] Length = 669 Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 185/639 (28%), Positives = 301/639 (47%), Gaps = 81/639 (12%) Query: 5 LSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WL++H D + + ++ L +GLE E++ P + KVL+ E + + Sbjct: 6 IEWLREHADVPSGTTAAQLAADLVKVGLEEERIVPPSVTGPLVVGKVLTREAKEQSNGKV 65 Query: 63 L---RIDTG-KHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVN 105 + R+D G +H + +VCGA N VG V + PG+ +P + + Sbjct: 66 INYCRVDVGPQHNDAPGTGKEPSELPSRGIVCGAHNFEVGDSVVVSLPGAVLP-GDFAIA 124 Query: 106 VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP---------- 155 RK G S GM+CS +EL + +D + I+ L D + D EL +P Sbjct: 125 ARKTYGHTSDGMICSARELGIGEDHSGIIVL--DQWLAAHGHDGEELPEPGTDAIPLLGL 182 Query: 156 ---IIDVSLTPNRSDCIGVRGIALD-------------------LVAAGLGKLKEINISC 193 ++++++TP+R C +RG+A + L G+ + E + Sbjct: 183 GEEVLEINITPDRGYCFSMRGVAREYSHSTGAVFTDPADGTNPGLYPHGVAQAGEGGFAV 242 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDI 252 + ++ P+ + D + V+G+ +P WMR+RL A G+R IS VD+ Sbjct: 243 EIPADPRPIHGRPGADR------YVARVVRGIDPAAPSPAWMRERLTAAGMRPISLAVDV 296 Query: 253 TNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD----- 307 TNYV LD G P H FD +++ + VRRA GE + LD +L P+++VIA Sbjct: 297 TNYVMLDLGQPLHAFDLAKVHAPIVVRRAEEGESLTFLDEVTRELDPEDLVIADSPQGLG 356 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 R +AG+ GG A D TTDVL+E A +D ++IARS + + T+S R ERGVD Sbjct: 357 SRPLVLAGVFGGAAAEVDATTTDVLIEAAHFDAVSIARSARRHKLPTESSKRNERGVD-T 415 Query: 368 GMIPV-LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR 426 + PV + V L++ GGTA + + T P I+ + +RL+G+ E Sbjct: 416 ALAPVAAQRAVDLLVEYGGGTADPVSTDVDRTVAPAPILIRSDAAQRLTGVAYGTERVSE 475 Query: 427 ILERLGFSVIGE------YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 +L +G +V ++ V+ P+WR D+ A EE+ R+ G D I P+ + Sbjct: 476 LLTMIGCTVKAAGADEAGHELLAVTPPTWRPDLVGAAHFAEEVARLDGYDNI---PVIVP 532 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG----QRELEILNP 536 L+ +Q R V LA + +V+++ FI L G ++ + + NP Sbjct: 533 TAPAGTGLTPRQRARRQVVAALADAGLTQVLSYPFIGDVHDRLGIAGDDPRRQAMRLANP 592 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 ++ D MRTS+L L+ RNV R + D A++EV V Sbjct: 593 LAEDAPLMRTSVLDSLVDVARRNVSRGLGDVAVYEVGTV 631 >gi|309800875|ref|ZP_07695007.1| phenylalanine--tRNA ligase, B5 domain protein [Bifidobacterium dentium JCVIHMP022] gi|308222411|gb|EFO78691.1| phenylalanine--tRNA ligase, B5 domain protein [Bifidobacterium dentium JCVIHMP022] Length = 576 Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 180/590 (30%), Positives = 284/590 (48%), Gaps = 59/590 (10%) Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD------GRIQ 311 LD G P H +D +I + VRRA GE + LD +++DLS ++++I RI Sbjct: 3 LDLGQPMHAYDLDKIEGPIVVRRAVEGETLTTLDGKKHDLSVEDLLITDSPNGEHGSRIL 62 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 IAG++GG + T ++L+E A +D ++IARS + I +++ RFERGVD Q Sbjct: 63 GIAGVMGGLYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPA 122 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 + L++ G S+ N R I F +EV R++G+D + IL + Sbjct: 123 AAQMAAELMVKYGNGEPSEHPTDVNTVTPARTIHFKATEVARVAGLDTDVNTISGILTDI 182 Query: 432 GFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSL 490 G SV G + +F V+ PSWR D+ E DLVEE+ R+ G D+I +P V K L+ Sbjct: 183 GCSVAGGGNGEFSVTAPSWRPDLNEPCDLVEEVARLVGYDEIPVT-VPPAPVAGKVGLTA 241 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-----EILNPISADMSNMR 545 +Q R R + LA M+E +++ F+ E F + E+ EI NP++ D +R Sbjct: 242 EQLRKRQIADELAEYGMVETLSYPFVGDEDYKYFAYDKDEIKKVSVEIANPLAGDRPFLR 301 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-------------PEGQKYMA---- 588 +++P L + RN+ R + + +++E+ HVY D P ++ A Sbjct: 302 RAIMPTLAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVRPTDEQLAALDAG 361 Query: 589 --------AGIRKGS---SGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 AGI G+ +G G R WSD E R D A ++L Sbjct: 362 LPDQPMHVAGILTGNAVDTGWLGERRAVDWSDAVEAVHRISDRIGAG----------LTL 411 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 D + E P+ +HPGR+ + + + +G GE HP++ + GL FE+ L ++ Sbjct: 412 DQPKAED-VPAQWHPGRAARV-MAGDAFVGMVGELHPHVNEALGLPAHSAAFELDLTALF 469 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQ 754 + + K + S+ PVK+DLAF V + A L +I + ++D+ +FDVF Sbjct: 470 ATLSGKPVQAKPI--STFPPVKQDLAFTVPNDVTAAALQQVIAEAAGDSLEDIKLFDVFT 527 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 G LGEG KS+A V + T +D + RIV+ K A LR+ Sbjct: 528 GDQLGEGVKSLAYAVTFRAPDKTLTSEDSEAIRKRIVDE-ASKLGAQLRA 576 >gi|320105602|ref|YP_004181192.1| phenylalanyl-tRNA synthetase subunit beta [Terriglobus saanensis SP1PR4] gi|319924123|gb|ADV81198.1| phenylalanyl-tRNA synthetase, beta subunit [Terriglobus saanensis SP1PR4] Length = 688 Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 186/664 (28%), Positives = 322/664 (48%), Gaps = 57/664 (8%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 + ++ +T NR D + G+A + A L +I C ++ ++ + +D LC Sbjct: 44 LFEMDITTNRVDAMNHYGVAREAAAIYGIPLMKIEDDCHAATTGDGYPVRIEAED--LCG 101 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F V+GV + M +R +G + IS +VD+TNY L G+P+H FD + Sbjct: 102 RFTAQVVRGVNVAASTGLMAERFAQLGQKPISNVVDVTNYTWLAMGHPTHAFDLDTLEGA 161 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VRRA GEK+ LD E L+ +++V+A + + ++AG++GG + ++T +VLVE Sbjct: 162 IVVRRAREGEKLHLLDGSEKTLTAEDLVVADEKKALALAGVMGGWDSRVTESTKNVLVEA 221 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDI 391 A +D I S K G+ TD+ +RFERG D +++V ++ CGGTA +DI Sbjct: 222 AWFDQAAIRASSKRHGLHTDASHRFERGADFAAAPVANRYVVKKLVEWCGGTAEGGMTDI 281 Query: 392 CIA--RNITYKPRKIVFMNSEVKRLSGID-----VPIEDSLRILERLG-----FSVIGEY 439 ++ T K I EV+RL G V +D + LE LG +++G Y Sbjct: 282 VVSAIEARTAKRPHIAMSAEEVRRLLGTTLEGGLVSADDIEKYLEALGCGLRPAAIVGTY 341 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP--------LTQVEDKRNLSLQ 491 EV++PSWR D+E + DL+EE+ R+YG ++ ++ LP L VE +R L Sbjct: 342 ---EVALPSWRLDLEREIDLIEEVARVYGYNRF-ADTLPAFSGGIIALPHVEQERVL--- 394 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 + L EV+ +F S+ + F G + + + NP++A+ +R SLLPG Sbjct: 395 -------RETLRGLGWSEVIGSTFCSEADAATFAGEKGVVAMGNPLNAEAGVLRPSLLPG 447 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 + N++R + + +FE+ V+ T E + + + G R SE Sbjct: 448 AVTMLAGNLNRDVREARVFEIGAVFTGSTAEVHEEPSLAL-----AAYGGARATQTISER 502 Query: 612 RCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGE 669 F ++ A L+ P VS ++ S P+W PGR +++ EI + GE Sbjct: 503 DALFFEMKGAVEGLLAKFAPVGVSYEA----SPLPAWMEPGRGARVLRGGEEIAV--IGE 556 Query: 670 FHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP 729 I + L + EV + ++ RT K S V RDL+F+ + Sbjct: 557 LSAAIAEKRKLKQVVVLGEVRAVKL-LATPLRTPLAK--EPSRFQAVDRDLSFLFSDAVR 613 Query: 730 AGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 G + + I+ V + V ++F+GK++ EG+ S+ +++++Q T R+D++ +++ Sbjct: 614 WGAIESAIRGVGAAELVSVEPLEIFRGKTVAEGEYSLLLRIVLQAADRTLREDEVTGIVE 673 Query: 789 RIVE 792 R+ + Sbjct: 674 RVTQ 677 >gi|89898667|ref|YP_515777.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila felis Fe/C-56] gi|89332039|dbj|BAE81632.1| phenylalaninyl tRNA synthetase beta chain [Chlamydophila felis Fe/C-56] Length = 794 Score = 248 bits (632), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 213/824 (25%), Positives = 373/824 (45%), Gaps = 79/824 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVE-KVDNREALSPFTIVKVLSVERNPDLD 59 M+ +LS L+ + + +++I + IG+E E + + S KVL+ +P+ D Sbjct: 1 MRVSLSSLQRFFSSPLPIKQIIEACDRIGIETEIETLLTCSFSSIVTAKVLTTLPHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIESTG 116 ++ +E Q+VCGAPN R G++ A PG+ + ++ + KIRG+ES G Sbjct: 61 KLVIATLFDGQKEYQIVCGAPNCRPGIIVPLALPGAKLHDSEGKAFTIKKSKIRGVESQG 120 Query: 117 MMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 M C EL L + E P++ P+G S L+D +I+ SLTPN C + G Sbjct: 121 MCCGADELGFPHLQTSDRGLFEFPLNTPLGE--SACTILADTLIECSLTPNLGHCASLLG 178 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVK--GVRNN 228 +A ++ + + + P PLE + + D +LC F CCVK GV + Sbjct: 179 LAREIT-----HVTNVELVLPKEFSLAPLETNAEENPEHDQNLCPIF--CCVKISGVSSE 231 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKI 287 +P ++ L + +SI+++VDITNY+ L G P HV+DA + D L +++ + Sbjct: 232 TSPQELQNALGELKQKSINSIVDITNYIMLSLGQPLHVYDAQSVDFDSLRAQKSQEKHTV 291 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 L+N E +S +I +AG++G + + TTD+++E A + P I S Sbjct: 292 KLLNNTEVVISEGIPIICDKNHTVGLAGVMGSLDSSFIETTTDIVLEAAYFSPQAIRASQ 351 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIV 405 ++ + +++ YRF RG+D ++P L + + L + I R + P+ + Sbjct: 352 THIPLHSEAAYRFTRGIDPNNVLPSLYAAIHYVKKLFPN--AKISPIRVLGAAPQSPSLT 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEIL 464 +KRL GI + L LGF+V E V VPS+R D+ E+ DLVEEI Sbjct: 410 LRTDMIKRLLGISLSDSQVEEKLVSLGFTVTPQETGSLLVHVPSYRHDIHEEVDLVEEIY 469 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R ++P + + + S R V LA+ + + + E + L Sbjct: 470 R--------TQPWKIESRKAPAVYTPMYSLKREVVDFLANSGLQQFFTCDLLDAETAAL- 520 Query: 525 GGGQRELEILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 ++E + ++ S + +R SLLPGLLK+T N++R FE+ Y + Sbjct: 521 --NRQEADYISLQGSKQATVLRDSLLPGLLKSTATNLNRQAPYVHAFELGTTYSKKDSKY 578 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERC-----------RFVDLFDAKADALSVIEPF 632 Q+ + GI + G S S ER R F + A +++ Sbjct: 579 QETQSLGII-----LSGQAEGLSWISHERPLSFYSIKGWLERLFQYFHISSQAYTLLPS- 632 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 D+L F HP + + + LG FG HP + + + + E+ LD Sbjct: 633 ---DNLNF--------HPYQQAELYLHKNM-LGRFGTLHPQLCKKAQIKHSVFFAELSLD 680 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK----RDLAFIVDQHIPAGTL-VNIIKNVDRLIDDV 747 + Q KK +HL +P+ RD+ V + +PA +L ++ + ++ V Sbjct: 681 VLLFMQ------KKAIHLYKPYPIYPSSFRDITLTVHESVPANSLRKKLLSFHSKWLESV 734 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 ++ ++Q K+ K+V+++++ Q + T +I +R++ Sbjct: 735 SIISIYQNKNPDTQNKNVSLRLVFQDKERTLSSQEIEEEHERLL 778 >gi|149198939|ref|ZP_01875980.1| phenylalanyl-tRNA synthetase beta subunit [Lentisphaera araneosa HTCC2155] gi|149137934|gb|EDM26346.1| phenylalanyl-tRNA synthetase beta subunit [Lentisphaera araneosa HTCC2155] Length = 808 Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 233/833 (27%), Positives = 395/833 (47%), Gaps = 75/833 (9%) Query: 1 MKFTLSWLKDHLDT--DVSLEKICDTLT-SIGLEVEKVDNREALSPFTIVKVLSVERNPD 57 MK +L+W+++ +D D + + D ++ S+ E AL+ VKVLS +P+ Sbjct: 1 MKISLNWIQEFVDYKLDRDAQALGDFISLSVAEVEEVEQVGAALAQVKAVKVLSCAPHPE 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN-----MIVNVRK--I 109 D + I+TG +E +VCGA N R G+ +A G+ +P + I+ ++K I Sbjct: 61 ADRLQLATINTGS-EERTIVCGASNCRPGITVPFADLGAKLPITDKEGKPAILEIKKAKI 119 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV-------SLT 162 RG ESTGM+CSE EL L+D + I+E+ DA G + LE I D+ SLT Sbjct: 120 RGFESTGMLCSEAELGLADSAEGILEMD-DAIAAGTYLNTLEQYSGIEDIIFEIDNKSLT 178 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 +R D G G A + A LK + +++ I D D C+ ++ V Sbjct: 179 -HRPDLWGHYGFAREFSAMFDLDLKTYPGTAVEQADN-GFAIAIDAGD---CRRYSSLRV 233 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRA 281 K + +P W++ RL G+ I+ +VD+TN++ L+ G P H FD ++ + VR A Sbjct: 234 KNISVGDSPQWLQDRLTQSGINCINNIVDLTNFILLELGQPMHAFDTEKLKGQDIVVRTA 293 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 +GE ALD +Y L+ +++VI+ + +++AG+IGG + D+N+T++L+E A ++ Sbjct: 294 QNGETFKALDENDYTLTEEDMVISIGAQAEALAGVIGGDTSAIDENSTEILIECASFNAS 353 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC------GGTASDICIAR 395 + RS GI TDS RFE+ +D + L I LI LC GG A Sbjct: 354 AVRRSATRHGIRTDSSSRFEKSLDPENTPLALARIWQLIKELCPKAELVGGMGDLYTQAY 413 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR--QDV 453 + I F +++ G D+ + L+ LERLGF + G+ ++ +PSWR +DV Sbjct: 414 PAAHIDTSIDF----IEKALGCDIGKDFILKRLERLGFEIQGD---LKLGIPSWRNTKDV 466 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT--RYVKRVLAS-RAMMEV 510 D+VEEI R+YG D I E L DK ++ +RT R K +L++ + E+ Sbjct: 467 AIPEDIVEEIGRLYGFDNITPEVL---HTADKVP-AVNSARTLERRFKDILSNGYSYSEI 522 Query: 511 VNWSFISKEQSVLFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR----AIA 565 + + + ++ FG + +++ NP+S D + M+ + +P ++KA N+ + Sbjct: 523 MTYPWCGDDELKAFGLSSEGLMKLQNPVSEDATYMKPNNMPKIIKAVAENLKHFNSVKLY 582 Query: 566 DFA-IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 DF I++ S + + P + + + +G K+ + F +L A+ Sbjct: 583 DFNRIYDTSQMVQELLPTERFQFSGALVPAPAG---------KKNLQTEAFYELKATVAN 633 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 L V + L AP W HPG S + +VL + HP + + + + Sbjct: 634 LLEVAG--IKTWQLSEYKDAPEWVHPGISCQFR-RGRVVLAEIFKLHPAVAEKNKIKSNA 690 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRL 743 F + D + S++K K +S V D+ + AG + +I K + Sbjct: 691 YLFCINFDELAKSKRKL----KYEQISKFPAVPFDITVQAPKKALAGDIQGLIRKGGGKN 746 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 + DV VF V++ E K+V+ ++ T D+I L +V ++K Sbjct: 747 LLDVEVFSVYE----REEDKTVSFRMHFAAKDHTLVHDEIHQLQKNVVAAILK 795 >gi|331089129|ref|ZP_08338032.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] gi|330405906|gb|EGG85432.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA] Length = 814 Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 230/857 (26%), Positives = 410/857 (47%), Gaps = 95/857 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPD 57 MK +LSW++D+++ D L+K+ LT +EVE V+ IV V+ +E +P+ Sbjct: 1 MKLSLSWIRDYVNIPEDADLKKLAYDLTMSTVEVEDVEYLAERFENMIVGVIEKIEPHPN 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + +++ G + +VCG N+ G+ + PG+ + + +++ K+RG+ Sbjct: 61 ADRLRVCKVNIGSDEIKDIVCGGINLEEGMRVAVSCPGAVVRWHGEGEPVVIKNSKLRGV 120 Query: 113 ESTGMMCSEKELML-----SDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDV---SLTP 163 ES GM+C+ E+ L S+ I++L D P G L+D L+++D ++++ S+T Sbjct: 121 ESFGMICASDEIGLGELFPSETEGEILDLSAFDVPAGTSLADALDMNDVLLEIDNKSMT- 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR D G GIA ++ A L +I P ++ + + K +++D C + + Sbjct: 180 NRPDLWGHYGIAREIAALYNLPLAKIE---PFRAD-VQSDFKVEIEDPDRCTRYIGVEMS 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 GV AP M+ R+ VG+R I+ALVDITNYV L G P+H FDA I+D + VR A Sbjct: 236 GVAVKPAPYKMQNRIWKVGMRPINALVDITNYVMLATGNPTHAFDADNITDHIVVRHAGE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEK+L L+++E +L+ D++VI ++AG++GG T V++EVA ++ I Sbjct: 296 GEKLLLLNDKELELNADDLVITDSEGAVALAGVMGGAKDSILPKTERVILEVANFEATGI 355 Query: 344 ARSGKNLGIITDSRYRFERGVDL----QGMIPVLKHIVSL-----ILSLCGGTASDICIA 394 R+ T++ R+E+ +D Q + +K+ L + C + A Sbjct: 356 RRTALRYDTRTEASSRYEKAIDPERCDQALALSMKYFKELYPELQVTGYCDNYVKKLDRA 415 Query: 395 R---NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 N+T+ +++ G + E+ LE+LGF V + D V+ P+WR Sbjct: 416 EIDVNLTWLEKRL-----------GKHLTNEEIQGKLEQLGFDVQIDGDNMHVTAPTWRS 464 Query: 452 --DVEEKADLVEEILRIYGVDQIKSEPLPLTQVE--DKRNLSLQQSRTRYVKRVLASR-A 506 D+ K D++EE+ R+YG D ++ T + ++++ SL R +K LA R Sbjct: 465 TGDISIKDDVMEEVARMYGYDNFEATEFTTTFTDSINQKDKSL----VRNIKEYLAIRCG 520 Query: 507 MMEVVNWSFISKE-QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 M EV + +++ + + L++ P + DMS +R+SLLP L +A +N +R Sbjct: 521 MQEVYTYPWMNDVFVNAVLQSTDGVLKLSTPPAPDMSCIRSSLLPNLCEAVAKN-ERYFN 579 Query: 566 DFAIFEVSHVY--ENDT---------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 DF+IFE + V+ +N T PE ++++ A +S ++ G Sbjct: 580 DFSIFEEAQVFFDKNYTNAYDETESLPEQRRHIGAAF---ASSVKDIGM----------- 625 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 LF L + + +++ F + P W I E + G G Sbjct: 626 ---LFREAKGVLEYMPRYTHMEAYEFKKEEKPVWADNVVWLNIYLDDEKI-GDMGLVAKK 681 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKK--RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 + G+ N V L + S+ K +++T K HL+ D++ + D Sbjct: 682 VSMECGIKN----LSVILFEMDASKLKPLKSRTNKFEHLAEYPETDYDISMLFDSDAVWN 737 Query: 732 TLVNII---KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + + + K L+ D + D ++GK + +GKKSV I++ I + T +I + + Sbjct: 738 DIYDAVMGKKKASALLKDASFVDEYRGKQIPQGKKSVTIRLTIGSDEKTLTSQEIESVAE 797 Query: 789 RIVENVVKKTNAVLRSS 805 ++++ + KK A LR+ Sbjct: 798 QVMKKLGKKMGAELRTQ 814 >gi|32490835|ref|NP_871089.1| hypothetical protein WGLp086 [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|30316211|sp|Q8D3B5|SYFB_WIGBR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|25166041|dbj|BAC24232.1| pheT [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 803 Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 211/819 (25%), Positives = 391/819 (47%), Gaps = 49/819 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M + WL+++L ++ L +I + +T IGLEVEK+ S I KV+S +++P Sbjct: 1 MNLSEIWLREYLSINLDLNEIINRITKIGLEVEKIIPVSMKFSGIKIGKVISCKQHPK-- 58 Query: 60 CAILRI---DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 C L+I I V+ + A GS +P N IV + + G ES G Sbjct: 59 CKKLKIFLIKINNKNIINVISDYDKSLINKKIAVAVNGSILP-NRTIVEKKFLYGYESCG 117 Query: 117 MMCSEKELM---LSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 + C+ +L L + S I+ L +A +G + +Y L+D II + ++ NR DC+ + G Sbjct: 118 IFCTYDQLKIFGLKETSKDIIVLDKNAIIGEDIKNYFFLNDNIICIKVSHNRCDCLNIIG 177 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ +++ +L E + ++S K +++ C + +K + NV P Sbjct: 178 LS-RAISSEYNELLENKLINKINSTK-DYGFKIKINEPEACPKYLTRKIKYINLNVNTPI 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W+ +R++ G + + ++DI NYV ++ G +FDA +IS +TVR + E ++ N Sbjct: 236 WISERIRRSGFKPKNIIIDIINYVFIETGQTIKIFDADKISGNITVRFSKEKESMMISKN 295 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT-DVLVEVALWDPINIARSGKNLG 351 ++ + + +V++ I IAGI+ G A D TT ++++ L+ + + Sbjct: 296 KKIIIQKNTLVVSDKNSIIEIAGILLGYSARIDSKTTINIIISSVLYRSKFLFGNSVKYC 355 Query: 352 IITDSRYRFERGVDLQGMIPVLKHI-----VSLILSLCGGTASDICIARNITYKPRKIVF 406 I +D YR ER + + P ++H+ LIL C G+ I N + P+KI+ Sbjct: 356 INSDLAYRNERNM----IDPNIQHLAINRATELILRFCCGSPGKIINYINNKFLPKKILI 411 Query: 407 MNSEVKRLSGIDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQ-DVEEKADLVEEI 463 + K + I L IL LG+ + ++VSVPSWR +V+ + DL+ +I Sbjct: 412 KLYKKKLYEILGFFISKKLIENILLLLGYKYEFIKNYWKVSVPSWRMCNVKIEEDLISDI 471 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVKRVLASRAMMEVVNWSFISKEQSV 522 R YG ++I P+ L+ + K N T K++L +R E+++++F+ K Sbjct: 472 SRFYGFEKI---PIDLSYKKIKYNNCKYNINTLNNAKKLLTNRGYQEIISYTFVDKNIQN 528 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 + + + I+NPIS +MS +R S ++ N +R IFE + + Sbjct: 529 IIHPNKIPVPIINPISTEMSVLRLSFFTNFIQTILYNQNRQTKYIKIFESGFCFSKNKKY 588 Query: 583 ----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 Q + +G G +E W K E +D FD K D +++ + Sbjct: 589 KLGIKQSFFISGAVSGFKNVES----WYSKQRE----IDFFDIKGDVETLLYLNGNSSDF 640 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 F++ +HPG++ I + V G GE +PNI + + N I FE+ D+I Sbjct: 641 EFKTCKNKEFHPGKNSKIFFKKKYV-GIIGEINPNIQNKLDIKNRIFVFELLWDNI---- 695 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKS 757 K K+ ++S + RD++ ++ IP ++ I K+ + + + ++ +FD++QGK Sbjct: 696 -KNFYVPKIYNISDIPFNYRDISIVISNKIPIIEVIKICKDSIKKELININIFDIYQGKE 754 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 + +G KS++I++ +Q + +I ++++ + N+ K Sbjct: 755 IKKGHKSISIRLTLQNKNYNMTNLEINSILEKCICNLKK 793 >gi|24216734|ref|NP_714215.1| phenylalanyl-tRNA synthetase subunit beta [Leptospira interrogans serovar Lai str. 56601] gi|73919749|sp|Q8EZ26|SYFB_LEPIN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|24198087|gb|AAN51233.1| phenylalanyl-tRNA synthetase beta chain [Leptospira interrogans serovar Lai str. 56601] Length = 808 Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 236/832 (28%), Positives = 402/832 (48%), Gaps = 76/832 (9%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERN 55 MK +L W+ D +V L+ I L I + V ++D+ P IV++ S+E++ Sbjct: 1 MKLSLDWMNDFTPLKEVGLDAI---LKKIAISVCEIDDATEFRPELDFVKIVRIESLEKH 57 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 P D I+++ G + Q+V GA NV++G L A PG+ + + ++ + ++RG++S Sbjct: 58 PSADKLQIVQVFDGSSKS-QIVTGATNVKIGDLVPLAIPGAKLGDKEILES--ELRGVKS 114 Query: 115 TGMMCSEKELMLSDDSASIMELP-ID-APVGGRLSDYLELSDPIIDV---SLTPNRSDCI 169 +GM+CSEKEL LS++ + L +D A VG + +L D I +V S+T +R D Sbjct: 115 SGMLCSEKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYDDIIFEVDNKSIT-HRPDLW 173 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-------DSSLCKGFAMCCV 222 G A +L + + P+ FDL ++ + + Sbjct: 174 SHFGFARELAS---------QLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSI 224 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD----VLTV 278 GV + + RL+ G+R I+ +VD++NYV L+ G P+H FD + + L V Sbjct: 225 SGVSVFPSKRKFQSRLQKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGEISLEV 284 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 A GE LD L + ++I + G+ +IAG++GGK + + TT++++E A++ Sbjct: 285 SFAKKGESFALLDETSPALEEEVLLIRNQGKPVAIAGVMGGKESAVQNTTTEIVMESAVF 344 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 I +S ++ GI +DS R+E+G++ +PV++ ++L L G + Sbjct: 345 MRERIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNL-LKENGCSELKASEPVGFL 403 Query: 399 YKPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ--DV 453 + P K V +++++ ++ G+ + D ILERL F V + + EV VP +R DV Sbjct: 404 HIPHKEVRIHTDIHFINAKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDV 463 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVN 512 DLVEEI R G D I+ PL L +V+ RNL+ + R +A + EV N Sbjct: 464 TIPEDLVEEIGRTKGYDTIQVSPL-LAEVKTPIRNLNRELERKCKTFFAIALK-YHEVFN 521 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +SF S +++ G + ++I N + + S +R SLLP LLK T N DR ++ IFE Sbjct: 522 YSFQSYKENEFSGDPKLSVKIKNEMPEEQSVLRNSLLPSLLKNTRTNQDR-FSEIKIFEF 580 Query: 573 SHVYEN-DTPEGQKYM---AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 VY N PE +K + A + K SS E +L + D K + S Sbjct: 581 GRVYFNLPEPENEKKIFAFAVSLDKKSS--EPDLKLLEE---------DFLKIKKEVESF 629 Query: 629 IEPFVSLDSLRFESGAPSWYHPG-------RSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +E + + ++ + +HPG RSG K E ++G G HP ILD F L Sbjct: 630 LES-IQIYEYTWKIQQETIFHPGANLCLVARSG--KDGLETIVGNLGYVHPAILDSFELK 686 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + + I + K + V S + DL+ +V + +++K ++ Sbjct: 687 KRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPEAEIDLSILVGEKENTNVFTDLVK-LE 745 Query: 742 RL--IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 R+ + + V+ F G ++ EGKKSV+ + + + TF + I+ + D++V Sbjct: 746 RIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNYERTFTQERIKEISDQLV 797 >gi|314966007|gb|EFT10106.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL082PA2] Length = 668 Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 199/692 (28%), Positives = 325/692 (46%), Gaps = 64/692 (9%) Query: 150 LELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDL 208 L + + ++DV +TP+ C+ +RGIA ++ A ++ P E I P+ + Sbjct: 4 LGVPEEVLDVDVTPDIGYCMSMRGIAREVAHA-----MSVHFRDPYDDEPIGPVLGPVAV 58 Query: 209 D-DSSLCKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 D S C F V G+ P ++ R+ G+R I+ +VD+TNYV L+ G P H Sbjct: 59 DVQSDACSQFIALPVSGMNPGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHA 118 Query: 267 FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 +DA +S + VR+A GE +L LD+ + L PD++VIA D +AG++GG Sbjct: 119 YDADNVSGTIVVRKAHEGEHLLTLDDTDRTLDPDDLVIADDLGAIGLAGVMGGAATEVTA 178 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LIL 381 TT +++E A +DP+ +AR+ + + +++ RFERGVD P+ H + L+ Sbjct: 179 ETTSIILEGAHFDPMTVARAYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLA 233 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYD 440 G T + + + PR+ + N+++ R+ G VP E+ + IL R G V D Sbjct: 234 QYGGATVGEPTVVGEVPEMPRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGD 291 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 + P+WR D+ + D VEEI R G D+IK+ P L+ Q R V R Sbjct: 292 SLHLVAPTWRPDLVDAYDYVEEIGRKIGFDRIKAVLPPSLGAS---GLTKAQRGRRRVLR 348 Query: 501 VLASRAMMEVVNWSFIS-KEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKA 555 + +E++ FI K+ VL G +++ NP+ +RT+LLPGL A Sbjct: 349 SVVEAGFVELITLPFIGDKDLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHA 408 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTP------------------EGQKYMAAGIRKGSSG 597 N+ R+ D A+FE V+ TP E + A R ++ Sbjct: 409 VTTNMSRSQDDLAVFESGTVFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAV 468 Query: 598 IEGS--GRLWSDKS-EERCRFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 I GS W +S + R L K ADAL V L ++ + +HPGR Sbjct: 469 ICGSWLPDRWDGESVKADWRHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRC 520 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSL 713 + + V+G+ GE HP ++ GL C E LD++ + + +V+ +SS Sbjct: 521 AALIVDGK-VIGHAGELHPTVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSF 576 Query: 714 HPVKRDLAFIVDQHIPAGTLVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 K D+A +VD+ + A + +I+ L++ V +FDV++G+ +G +KS+A + ++ Sbjct: 577 PVAKEDVALVVDKSVAAEDVRQALIEGAGPLLESVELFDVYEGEQVGYNRKSLAFNLRLR 636 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D + D V + A LRS Sbjct: 637 GADRTLTDSEALEARDAAVVRAEETCGAQLRS 668 >gi|153816034|ref|ZP_01968702.1| hypothetical protein RUMTOR_02280 [Ruminococcus torques ATCC 27756] gi|317500972|ref|ZP_07959182.1| hypothetical protein HMPREF1026_01125 [Lachnospiraceae bacterium 8_1_57FAA] gi|145846681|gb|EDK23599.1| hypothetical protein RUMTOR_02280 [Ruminococcus torques ATCC 27756] gi|316897675|gb|EFV19736.1| hypothetical protein HMPREF1026_01125 [Lachnospiraceae bacterium 8_1_57FAA] Length = 814 Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 229/857 (26%), Positives = 410/857 (47%), Gaps = 95/857 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPD 57 MK +LSW++D+++ D L+K+ LT +EVE V+ IV V+ +E +P+ Sbjct: 1 MKLSLSWIRDYVNIPEDADLKKLAYDLTMSTVEVEDVEYLAERFENMIVGVIEKIEPHPN 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + +++ G + +VCG N+ G+ + PG+ + + +++ K+RG+ Sbjct: 61 ADRLRVCKVNIGSDEIKDIVCGGINLEEGMRVAVSCPGAVVRWHGEGEPVVIKNSKLRGV 120 Query: 113 ESTGMMCSEKELML-----SDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDV---SLTP 163 ES GM+C+ E+ L S+ I++L D P G L++ L+++D ++++ S+T Sbjct: 121 ESFGMICASDEIGLGELFPSETEGEILDLSAFDVPAGTSLANALDMNDVLLEIDNKSMT- 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR D G GIA ++ A L +I P ++ + + K +++D C + + Sbjct: 180 NRPDLWGHYGIAREIAALYNLPLAKIE---PFRAD-VQSDFKVEIEDPDRCTRYIGVEMS 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 GV AP M+ R+ VG+R I+ALVDITNYV L G P+H FDA I+D + VR A Sbjct: 236 GVAVKPAPYKMQNRIWKVGMRPINALVDITNYVMLATGNPTHAFDADNITDHIVVRHAGE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 GEK+L L+++E +L+ D++VI ++AG++GG T V++EVA ++ I Sbjct: 296 GEKLLLLNDKELELNADDLVITDSEGAVALAGVMGGAKDSILPKTERVILEVANFEATGI 355 Query: 344 ARSGKNLGIITDSRYRFERGVDL----QGMIPVLKHIVSL-----ILSLCGGTASDICIA 394 R+ T++ R+E+ +D Q + +K+ L + C + A Sbjct: 356 RRTALRYDTRTEASSRYEKAIDPERCDQALALSMKYFKELYPELQVTGYCDNYVKKLDRA 415 Query: 395 R---NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 N+T+ +++ G + E+ LE+LGF V + D V+ P+WR Sbjct: 416 EIDVNLTWLEKRL-----------GKHLTNEEIQGKLEQLGFDVQIDGDNMHVTAPTWRS 464 Query: 452 --DVEEKADLVEEILRIYGVDQIKSEPLPLTQVE--DKRNLSLQQSRTRYVKRVLASR-A 506 D+ K D++EE+ R+YG D ++ T + ++++ SL R +K LA R Sbjct: 465 TGDISIKDDVMEEVARMYGYDNFEATEFTTTFTDSINQKDKSL----VRNIKEYLAIRCG 520 Query: 507 MMEVVNWSFISKE-QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 M EV + +++ + + L++ P + DMS +R+SLLP L +A +N +R Sbjct: 521 MQEVYTYPWMNDVFVNAVLQSTDGVLKLSTPPAPDMSCIRSSLLPNLCEAVAKN-ERYFN 579 Query: 566 DFAIFEVSHVY--ENDT---------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 DF+IFE + V+ +N T PE ++++ A +S ++ G Sbjct: 580 DFSIFEEAQVFFDKNYTNAYDETESLPEQRRHIGAAF---ASSVKDIGM----------- 625 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 LF L + + +++ F + P W I E + G G Sbjct: 626 ---LFREAKGVLEYMPRYTHMEAYEFKKEEKPVWADNVVWLNIYLDDEKI-GDMGLVAKK 681 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKK--RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 + G+ N V L + S+ K +++T K HL+ D++ + D Sbjct: 682 VSMECGIKN----LSVILFEMDASKLKPLKSRTNKFEHLAEYPETDYDISMLFDSDAVWN 737 Query: 732 TLVNII---KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMD 788 + + + K L+ D + D ++GK + +GKKSV I++ I + T +I + + Sbjct: 738 DIYDAVMGKKKASALLKDASFVDEYRGKQIPQGKKSVTIRLTIGSDEKTLTSQEIESVAE 797 Query: 789 RIVENVVKKTNAVLRSS 805 ++++ + KK A LR+ Sbjct: 798 QVMKKLGKKMGAELRTQ 814 >gi|148927979|ref|ZP_01811379.1| phenylalanyl-tRNA synthetase, beta subunit [candidate division TM7 genomosp. GTL1] gi|147886674|gb|EDK72244.1| phenylalanyl-tRNA synthetase, beta subunit [candidate division TM7 genomosp. GTL1] Length = 837 Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 225/855 (26%), Positives = 404/855 (47%), Gaps = 93/855 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M +++WLK+ D ++ + ++ + S +E+E+V D + KV VE +PD D Sbjct: 1 MIVSVNWLKEFTDINLPIGELAGLIGSRLVEIEEVIDLGIRYERVVVAKVAKVEDHPDAD 60 Query: 60 -CAILRIDTGKHQE---------IQVVCGAPNVRVGLLGVWAPPGSCIPENNM-----IV 104 I+ ID + + +QVVCGAPNVR GLL W PPGS +P M I+ Sbjct: 61 RLHIVEIDDARQVKEVERLENGNVQVVCGAPNVRAGLLVAWLPPGSVVPSTFMDAEPFIL 120 Query: 105 NVRKIRGIESTGMMCSEKELMLSDDSASIMEL-PIDAPVGGRLSDYLELSDPIIDV---S 160 + RK+RG+ S GM+ S KEL SDD I+E+ DA G + EL D ++D+ S Sbjct: 121 DSRKLRGVMSHGMIASPKELAFSDDHTGILEIDKKDAAAGDSFAKLYELDDYLLDIENKS 180 Query: 161 LTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEI------------KFDL 208 LT +R DC G+ G A + VAA G+ + P +++ + + + Sbjct: 181 LT-HRPDCFGLIGFARE-VAAIQGQ----DFETPTWLKALEPRLGDKKAVDGIKNPRVTV 234 Query: 209 DDSSLCKGFAMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 ++ + + + + +P ++ L VG+R ISA+VDITNY+ L G P H F Sbjct: 235 ENPEIAPRYEAVILANINVTKQSPAQIQSFLSRVGMRPISAVVDITNYLMLLTGQPLHAF 294 Query: 268 DASRISDV-------LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 D + +TVR A GEK+ LD +E L+ D+++I S ++AG +GG Sbjct: 295 DYDKFVTAGGGDEASVTVREAREGEKLTLLDGKEISLASDDIIICSGTTPVALAGAMGGA 354 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 D+NT ++L+E A +D + + GI +++ RF +G PVL V + Sbjct: 355 STEIDENTRNILLESATFDLFRLRATQMRHGIFSEAITRFTKGQPPALTAPVLASAVRMF 414 Query: 381 LSLCGGT-ASDICIARNITYKPRKIVFMNSEVKRLSGI---DVPIEDSLRILERLGFSVI 436 + T A+DI ++ +P + + +++++G+ + ++LR L F+ Sbjct: 415 CDITDATRATDIV---DMYPEPTQQPTLKVPLEKINGVLGSRFSMLEALRPLGNAEFTTT 471 Query: 437 GE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP-LPLTQVEDKRNLSLQQSR 494 Y + P WR D+ + D++EEI R+ G D I EP LP + + + R Sbjct: 472 ATPYYTVVATPPYWRSDIHIEEDVIEEIGRLKGFDNI--EPTLPERDFKAVQPSKFDKFR 529 Query: 495 TRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ---RELEILNPISADMSNMRTSLLPG 551 T ++++ L EV+N++F+ + +L Q + ++ N +S D+ R SL PG Sbjct: 530 T-HLRQTLTRAGANEVLNYNFVHGD--LLKRASQSPEKAFKLANAMSPDLQYYRLSLTPG 586 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ------KYMAAGIRKGSSGIEGSGRLW 605 +L+ N+ + FA++E+ V+E + P+ ++ + + ++ + G + Sbjct: 587 ILEKVYPNLRQRFESFALYEIGKVHEKEVPDDHEPDVPAEFHSLALTLAATPKQAKGTAF 646 Query: 606 SDKSEERCRFVDLFDAKADALS-----VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 + + KA S +++P +SL FE+ R+ I++ +A Sbjct: 647 YNAKYILEYLMKNLGLKATYHSYVIDDIVQPALSLP---FET--------KRTAIVRVNA 695 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 E + G GE+ + L F L GFE LD + + + + LS ++D+ Sbjct: 696 ETI-GVVGEYKASTLKAFKLPAYAAGFE--LDILKLFEAVPSVNINYAPLSRFPGTEQDI 752 Query: 721 AFIVDQHIPAGTLVNIIKNV---DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 V + T+V++ +N ++L D++ D++Q ++ K++ I+V + K T Sbjct: 753 CVQVPLEVQYQTIVDVARNALSGEKLEWDISPIDIYQPEN--ADTKNITIRVSLVNHKQT 810 Query: 778 FRDDDIRILMDRIVE 792 + +++ + E Sbjct: 811 ISTSEASVVIAYLSE 825 >gi|304570505|ref|YP_003127.2| phenylalanyl-tRNA synthetase subunit beta [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|73919748|sp|Q72MG8|SYFB_LEPIC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 808 Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 235/832 (28%), Positives = 401/832 (48%), Gaps = 76/832 (9%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSP----FTIVKVLSVERN 55 MK +L W+ D +V L+ I L I + V ++D+ P IV++ S+E++ Sbjct: 1 MKLSLDWMNDFTPLKEVGLDAI---LKKIAISVCEIDDATEFRPELDFVKIVRIESLEKH 57 Query: 56 PDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 P D I ++ G + Q+V G NV++G L A PG+ + + ++ + ++RG++S Sbjct: 58 PSADKLQIAQVFDGSSKS-QIVTGVTNVKIGDLVPLAIPGAKLGDKEILES--ELRGVKS 114 Query: 115 TGMMCSEKELMLSDDSASIMELP-ID-APVGGRLSDYLELSDPIIDV---SLTPNRSDCI 169 +GM+CSEKEL LS++ + L +D A VG + +L +D I +V S+T +R D Sbjct: 115 SGMLCSEKELFLSEEGNGVWILNGLDQAEVGKTIRSFLYYNDIIFEVDNKSIT-HRPDLW 173 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-------DSSLCKGFAMCCV 222 G A +L + + P+ FDL ++ + + Sbjct: 174 SHFGFARELAS---------QLRLPIVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSI 224 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD----VLTV 278 GV + + RL+ G+R I+ +VD++NYV L+ G P+H FD + + L V Sbjct: 225 SGVSVFPSKRKFQSRLQKCGVRVINNVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEV 284 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 A GE LD L + ++I + G+ +IAG++GGK + + TT++++E A++ Sbjct: 285 SFAKKGESFALLDETSPALEEEVLLIRNQGKPVAIAGVMGGKESAVQNTTTEIVMESAVF 344 Query: 339 DPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT 398 I +S ++ GI +DS R+E+G++ +PV++ ++L L G + Sbjct: 345 MRERIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNL-LKENGCSELKASEPVGFL 403 Query: 399 YKPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ--DV 453 + P K V +++++ ++ G+ + D ILERL F V + + EV VP +R DV Sbjct: 404 HIPHKEVRIHTDIHFINAKLGVTLSQGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDV 463 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVN 512 DLVEEI R G D I+ PL L +V+ RNL+ + R +A + EV N Sbjct: 464 TIPEDLVEEIGRTKGYDTIQVSPL-LAEVKTPIRNLNRELERKCKTFFAIALK-YHEVFN 521 Query: 513 WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 +SF S +++ G + ++I N + + S +R SLLP LLK T N DR ++ IFE Sbjct: 522 YSFQSYKENEFSGDPKLSVKIKNEMPEEQSVLRNSLLPSLLKNTRTNQDR-FSEIKIFEF 580 Query: 573 SHVYEN-DTPEGQKYM---AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 VY N PE +K + A + K SS E +L + D K + S Sbjct: 581 GRVYFNLPEPENEKKIFAFAVSLDKKSS--EPDLKLLEE---------DFLKIKKEVESF 629 Query: 629 IEPFVSLDSLRFESGAPSWYHPG-------RSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 +E + + ++ + +HPG RSG K E ++G G HP ILD F L Sbjct: 630 LES-IQIYEYTWKIQQETIFHPGANLCLVARSG--KDGLETIVGNLGYVHPAILDSFELK 686 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD 741 + + I + K + V S + DL+ +V + +++K ++ Sbjct: 687 KRVIYGSFEFERIVELWNQNRKVSRFVTPSQFPEAEIDLSILVGEKENTNVFTDLVK-LE 745 Query: 742 RL--IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 R+ + + V+ F G ++ EGKKSV+ + + + TF + I+ + D++V Sbjct: 746 RIPELKEGWVYSQFMGGNVPEGKKSVSYRFRLVNYERTFTQERIKEISDQLV 797 >gi|255598488|ref|XP_002537020.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] gi|223517787|gb|EEF25362.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] Length = 381 Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 141/387 (36%), Positives = 221/387 (57%), Gaps = 14/387 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ +D V + ++ LT GLEV+ +D A S + ++L + +PD D Sbjct: 1 MKFSEQWLREWVDPSVDVNELSAQLTMAGLEVDAIDPAAAAFSGVVVGEILEAQHHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ G + QVVCGA N RVG+ +A G+ +P N+ + K+RG+ES GM+ Sbjct: 61 KLRVCRVSDGS-ETFQVVCGATNARVGIKVPFARIGAVLP--NVTIKQAKLRGVESFGML 117 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 C EL L D+ + ELP DAPVG + +L D II++ LTPNR+DC+ + GIA ++ Sbjct: 118 CGASELGLVDEIDGLWELPSDAPVGADVRSVFQLDDRIIEIGLTPNRADCLSIGGIAREV 177 Query: 179 VAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 G L + ++ P S S ++ EI +++ C + ++ V + A P W+ Sbjct: 178 -----GVLNRVAVTAPASPAVSATLADEIAIEIEAGDYCPRYVGRVIRNVDPSRATPLWL 232 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 R+RL+ G+RSI +VD+TNYV L+ G P H FD ++ + VRRA +GE + LD Q Sbjct: 233 RERLRRCGVRSIDPVVDVTNYVMLELGQPMHAFDLDTVNGGIRVRRATAGETLETLDGQA 292 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L PD++VIA ++AG++GG+ + NT +L+E A + P IA ++ G+ T Sbjct: 293 LELRPDSLVIADHQGPLALAGVMGGRPSAVSANTRHILLESAFFAPELIAGRARSYGLHT 352 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLIL 381 +S +RFERGVD ++ LIL Sbjct: 353 ESSHRFERGVDYTLQRQAIERATQLIL 379 >gi|62184790|ref|YP_219575.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila abortus S26/3] gi|81313031|sp|Q5L6W7|SYFB_CHLAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|62147857|emb|CAH63603.1| phenylalanyl-tRNA synthetase beta chain [Chlamydophila abortus S26/3] Length = 794 Score = 244 bits (622), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 208/811 (25%), Positives = 368/811 (45%), Gaps = 53/811 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ +LS L+ + +S+++I + IG+E E ++ + S +I+ K++ +P+ Sbjct: 1 MRVSLSSLQRFFSSPLSIKQIIEACDHIGIETE-IETLLSSSFSSIITAKIIQTLPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 D ++ QE QVVCGAPN R ++ A PG+ + + N + K+RGIES Sbjct: 60 DKLVVATLFDGKQEHQVVCGAPNCRPDIIVPLALPGAKLHDHEGNPYTIKKSKLRGIESQ 119 Query: 116 GMMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + E P + P+G S L+D I+ SLTPN C + Sbjct: 120 GMCCGADELGFSHLQKTERGLFEFPANTPLGE--SACALLADTWIEFSLTPNLGHCASLL 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEI---KFDLDDSSLCKGFAMCCVK--GVRN 227 G+A ++ + +++ P PLEI D+S+C F CCVK GV Sbjct: 178 GLAREI-----AHVTHVDLILPQEFSFSPLEIITKDSPSHDTSICPFF--CCVKISGVCA 230 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P ++Q L +SI+ +VDITNY+ L G P HV+DA + D L +A Sbjct: 231 ETSPQELQQALSQFKQKSINTIVDITNYIMLAMGQPLHVYDAKTVDIDSLHAEKAQEQHG 290 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+N+E + +I +AG++G + ++ TTD+++E A + P I S Sbjct: 291 LKLLNNEEVLIPQGTAIICDKNHTVGLAGVMGSGDSSFNETTTDIILEAAYFLPKAIRAS 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIV 405 + + +++ YRF RG D ++P L + I L + I + +I P + Sbjct: 351 QMRIPLHSEAAYRFTRGTDPDHVLPSLYAAIHYIQKLFPKAKVAPIHVLGSIPPSP-TLT 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEIL 464 V+R+ G+ + L LGF+V + V VP++R D+ E+ DLVEE+ Sbjct: 410 LRTEMVERVLGVPLSHSQVHEELASLGFTVTPQDQGSLSVQVPAYRHDIREEIDLVEEMC 469 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 R ++P + + + S + R + LA + + + E + L Sbjct: 470 R--------TQPWKIEKKKAPATYSPLYAFKREIVDFLAQSGLQQFFTCDLLDMETAALH 521 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + + S + +R SLLPGLLK+T N++R FE+ +Y + Q Sbjct: 522 RQETDYIALQG--SKHATVLRDSLLPGLLKSTATNLNRQAPYVHAFELGTIYTKKNAQYQ 579 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESG 643 + + GI E S W R + + K + F +S + Sbjct: 580 ETQSLGIILSGEAEELS---WVFHE----RVLSFYSIKGWLERLFRHFYISSKTYTIRPS 632 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 +HP + + + LG FG HP + + +P+ E+ +DS+ +QKK Sbjct: 633 EHPSFHPYQQADLYLHKHL-LGRFGTLHPQLCKKAHIKHPVFFAELSVDSLLHTQKKAIA 691 Query: 704 TKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGE 760 + ++ SS RD+ VD+ +PA L ++ + +++V++ ++Q K+ Sbjct: 692 RYQPYPIYPSSF----RDITLTVDESVPADALRKKLLSFPSKWLENVSIISIYQNKNPTA 747 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + +I +R++ Sbjct: 748 QNKNVSLRLVFQNKERTLSNQEIEEEHERLL 778 >gi|313901934|ref|ZP_07835351.1| phenylalanyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] gi|313467780|gb|EFR63277.1| phenylalanyl-tRNA synthetase, beta subunit [Thermaerobacter subterraneus DSM 13965] Length = 855 Score = 242 bits (617), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 169/600 (28%), Positives = 301/600 (50%), Gaps = 28/600 (4%) Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 ++ + D C + + VR +P W+R+RL A G+R I +VD+TNYV L+ G P Sbjct: 258 VRVRIADPEGCGLYVARILLDVRPGGSPLWLRRRLVAAGMRPIDRIVDVTNYVMLELGQP 317 Query: 264 SHVFDASRISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA 322 H FDA + + VR A GE + LD + L+ D++VIA R +AG++GG ++ Sbjct: 318 LHAFDAEAVGGGTVVVRSAAPGEVLETLDGRRRTLAKDDLVIADASRPIGLAGVMGGGNS 377 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 +T VL+E A ++P + R+ + G++T++ RFE+GVD QG++ + L Sbjct: 378 EITPSTRVVLLESAWFEPRRVRRTARRHGLLTEAAQRFEKGVDPQGVVRAANRAMDLFQQ 437 Query: 383 LCGGTA-SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK 441 G A +AR T+ R++ + +++ G+D+ LERLGF+V + Sbjct: 438 AGAGRAVPGAAVARARTFPERRLPWRPQRLRQWLGVDLDDRTMAGQLERLGFAV--DPQA 495 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 +V VPS+R D+E + DL EE+ R+YG+D+I + L + +S + + T V+ Sbjct: 496 GQVRVPSYRTDIEGEVDLAEEVGRVYGLDRIPA--LLPGGIPAPDQVSPRLALTWQVREA 553 Query: 502 LASRAMMEVVNWSFISKEQSVLFGG--------GQRELEILNPISADMSNMRTSLLPGLL 553 LA EVV+W+F + ++ G +R + +L+P++ + S +RT+LLPGLL Sbjct: 554 LARAGAQEVVSWAFT---RPAVWDGLRLPPDHPWRRAIPLLHPLAEEHSLLRTTLLPGLL 610 Query: 554 KATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI-EGSGRLWSDKSEER 612 N R A ++E V+ + ++ A +R G +G E G W+ Sbjct: 611 DVLAYNARRQQAGALVYEAGAVFVPQSLPLEELPAEPVRVGLAGFGELGGLHWAATPVP- 669 Query: 613 CRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 +D F K ++++ + + R+E W HPGR+ + V G+ GE H Sbjct: 670 ---MDFFTLKGVLEALLDELGIPAAACRWEPVEEPWLHPGRAAGLWLEGRRV-GWLGELH 725 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P + + L+ E+ L+++ + + + V + V+RD+A + Q +PA Sbjct: 726 PQVAAAWDLAVRPVAAELDLEALLPAVQPVPAYRPVPRFPA---VRRDIAVLAPQEMPAA 782 Query: 732 TLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + I+ V L++ V +FD + G+ + EG+ S+A ++ + T D+++ + R+ Sbjct: 783 AITQRIRQVAGPLLEAVHLFDRYTGQPVPEGQVSLAFALVYRAADRTLTDEEVDGVHGRV 842 Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 23/199 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-----DNREALSPFTIVKVLSVERN 55 M+ + WL+D +D + + + LT++GLEVE V + R +S +V +VE + Sbjct: 1 MRVPVEWLRDFIDVEEDARSLAERLTALGLEVEAVAVVAPEARGVVS----ARVETVEPH 56 Query: 56 PD-LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 P+ + R+ G VV GAPNVR G+ A PG+ +P M + VR +RG+ S Sbjct: 57 PEAAGLKVCRVAAGPAGRFTVVTGAPNVRPGMAVAMALPGAVLP-GGMNIGVRDVRGVAS 115 Query: 115 TGMMCSEKELMLSD---DSASIMEL-------PIDAPVGGR-LSDYLELSDPIIDVSLTP 163 GM+CS EL L D D A + +L P + P G L+ +L ++P++++SLTP Sbjct: 116 EGMLCSIAELGLGDQPADRAGLADLEDLAGGDPAEVPAAGADLAPWLGWTEPVLELSLTP 175 Query: 164 N-RSDCIGVRGIALDLVAA 181 N + C + GIA +L AA Sbjct: 176 NYAAHCQSILGIARELAAA 194 >gi|291542464|emb|CBL15574.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Ruminococcus bromii L2-63] Length = 789 Score = 241 bits (615), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 225/830 (27%), Positives = 392/830 (47%), Gaps = 86/830 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-----EALSPFTIVKVLSVERN 55 M +++W++D +D L+KI + + L +V+N +S + ++ SVE + Sbjct: 1 MFLSMNWIQDFVDLS-GLDKI-ELIRKFSLSTAEVENDILRKGSEISGIVVGEIKSVENH 58 Query: 56 PD-LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 PD +L+ID G+ + I VVCGAPNVRVGL +A G+ I E + + R + G S Sbjct: 59 PDSKKLHLLKIDAGEDELIDVVCGAPNVRVGLKTAFAKVGAKIGE--ITITPRALAGFTS 116 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV---SLTPNRSDCIGV 171 GM CSE E+ +SDD++ IME+ D G L D E+ D + +V SLT NR D G Sbjct: 117 NGMCCSEAEIGISDDNSGIMEITDDVKNGTDLKDIYEIDDIVFEVDNKSLT-NRPDLWGH 175 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA + A +LK ++ + + + +I ++D+ LC+ ++ ++ + NV+P Sbjct: 176 YGIAREFAALAGRELKPFDLDDLKAYDGLK-KIDMKIEDT-LCQRYSCLQIENINRNVSP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 MR RL G+R+I+ L D+TNY+ L+ G P H FD+ ++ + ++R LD Sbjct: 234 VNMRIRLFYCGMRAINYLADLTNYLMLEMGQPMHAFDSRKVEKI-RIKRFDKPFTFKTLD 292 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E ++ + ++I + +IAGI+GG + D+TT + +E A ++ +++ +S L Sbjct: 293 GVERNIDENTLMICNGNTPVAIAGIMGGLDSEIVDDTTTLTLESATFNAVSVRKSTVRLA 352 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT------YKPRKIV 405 TD+ R+E+ +D + + + V L+ SDI + ++T Y + Sbjct: 353 HRTDASMRYEKCLDPEMTVTAIARFVYLLKKY----DSDIKVVSSLTDEYAFRYDTVVLD 408 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR--QDVEEKADLVEEI 463 F + V R +GI++ + + LE LGF V D F V+VPSWR +DV KAD++EEI Sbjct: 409 FDKNFVDRYTGIEISNDRIVATLESLGFKVELNNDNFSVTVPSWRATKDVTIKADIIEEI 468 Query: 464 LRIYGVD--QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN---WSFISK 518 RIYG D +I + PL V S+ ++ +K +L R + ++ W++ + Sbjct: 469 TRIYGYDNFEIHTTRSPLYPVR----ASVVKTTENKIKDMLVKRYNLHELHSYVWAY-ND 523 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 E + + +++ N + ++ +R S++P L N+ + DF IFE+ V Sbjct: 524 ELKAIDIPVEDNVKLANATNPNIETLRNSIVPTQLCQIKSNLSFS-NDFGIFEIGRV--- 579 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 G+ + IE + S+ R D++ D L+V+ + +L Sbjct: 580 ---------VNGLDENGLCIENKKLAITLYSKTR-NVKDIYFELRDILAVVTDEIKHKAL 629 Query: 639 RFESGAP--SWYHP---------GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 FE P S+ HP GR+ +G G HP + I Sbjct: 630 TFEKAEPTHSYEHPVNLYSVCLDGRN----------IGTIGIVHPTVNKKIDKKAAIVFA 679 Query: 688 EVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLI 744 E I ++ T +V+ S P+ D++ V Q + L KN ++ Sbjct: 680 E-----IDVNAYANTDAAPIVYDEPSKFPPMDYDISVEVPQGMFFSHLAECWKNEGGEIL 734 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + D + ++ SV I+ + T +++ +MD+I+ N+ Sbjct: 735 KSTKIVDTYDTDTV----HSVTIRFEFSSNERTLSSAEVQKIMDKIISNL 780 >gi|21672412|ref|NP_660479.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|24418710|sp|P59057|SYFB_BUCAP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|21623021|gb|AAM67690.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 798 Score = 241 bits (614), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 214/819 (26%), Positives = 374/819 (45%), Gaps = 38/819 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP--DL 58 MKF +WL++ ++ ++ + + + G+E+E + + +V + NP Sbjct: 1 MKFNENWLREWINPKITSVSLRNQIVESGIEIESIHEFNPIFDGFLVGKIVECINPCKGN 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + IL++D G + + +VCGA N R + V A S +P + I + + S GM+ Sbjct: 61 NLKILKVDVGYKKLLNIVCGASNCRNNIKVVVATIDSILPNGSKIKIKKIKEKL-SEGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSD-YLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L + I+ELP D P+G +++D +L D I V++TPNR D + + GIA + Sbjct: 120 CSFFELGLFNFCKDIIELPEDIPIGKKINDLFLLKKDTFIKVAVTPNRPDGLSILGIARN 179 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQ 236 + A + LK+I + + +I + ++ + ++ V NV P WM++ Sbjct: 180 I--AAINNLKKIRLKKRILPTTIEDQFPITINTEKQSVNYFGRIIQNVNLNVDTPFWMKK 237 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 +L L S + + +I NY+ ++ G P ++ +A +I DV+ +R A E ++ ++ Sbjct: 238 KLFFCDLLSDNIIENILNYILIEIGQPLNILNADKIDDVIEIRMAIKKEFLILKNDTRIV 297 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D +V + +I I G I + NT ++ + L D +I K + Sbjct: 298 LDKDILVFSDKTKILFIPGNINNSDLEPNKNTKNIFLTSYLVDKKSILNILKKIDSNNIL 357 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR---NITYKPRKIVFMNSEVKR 413 Y + GVD +++ LI+ +CGG I + N KI + + Sbjct: 358 DY-YSHGVDASLQKYAIEYATYLIVKICGGKIGPINTKKSNFNSLSCSNKIKLYHQNFNK 416 Query: 414 LSGIDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ID ++ S+ IL L + V + V PSWR D+ + D++ +ILRIY + Sbjct: 417 C--IDSFVDSSIISNILLCLEYKVNFHKKYWYVFPPSWRFDILIEEDVIGDILRIYNYNN 474 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I PL + +N L+ +L +R E++ +SFI+ ++ Sbjct: 475 IPLTPLKQNYYFNSKNKDLKSPLLDEAAVLLINRGYYEIITYSFINPSLQDDIIPNNNQI 534 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQKYM 587 I NPIS D S+MR SL PGLLK N +R FE + D + Q+ Sbjct: 535 LISNPISKDFSSMRLSLWPGLLKTVSYNKNRQQESMRFFERGLCFSIDESQILGIRQEMF 594 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G+ G E W R VD +D K D S++E L+ Sbjct: 595 LGGVISGFYSKEN----WFSVR----RKVDFYDLKGDLESLLEVICGLNKFEIRHQNILG 646 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 HP +S I + + G G+ HP I L N FE+ L+ IS+ K T+++ Sbjct: 647 LHPEQSAKIYLDNKYI-GSLGKIHPKIEKKLNLYNSTFLFELSLNY--ISKLKFYNTEEI 703 Query: 708 VHLSSLHPV-KRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKS 764 S +P +RD+A +V + IP ++ + K+ V++ + ++ +FDV+ K KKS Sbjct: 704 ----SKYPTSRRDIAILVSKDIPFLDIITVCKDFFVNKKV-EINLFDVYSCKEFDNRKKS 758 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + I + Q K +++++ +++ ++ + KK VLR Sbjct: 759 LGISFVFQNFKKNLKENEVNLMLHDCIKILKKKFQVVLR 797 >gi|291519052|emb|CBK74273.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Butyrivibrio fibrisolvens 16/4] Length = 786 Score = 240 bits (612), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 226/832 (27%), Positives = 398/832 (47%), Gaps = 87/832 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-----EALSPFTIVKVLSVERN 55 M +++W+ D +D L+K+ + + L +V+N E LS + ++ SVE + Sbjct: 1 MFISMNWISDFVDLS-GLDKM-ELIAKFSLATAEVENDIFHKGEDLSSVVVAEIKSVEEH 58 Query: 56 PD-LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 P+ +L++D G + VVCGAPNVRVG+ +A G+ + ++ + R + G ES Sbjct: 59 PESKKLHLLKVDAGDGKLTDVVCGAPNVRVGMKTAFAKVGAQL--GDITIAPRPLAGYES 116 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV---SLTPNRSDCIGV 171 GM CSEKE+ +SD++ IM++ D G + D E+ D I +V SLT NR D G Sbjct: 117 FGMCCSEKEIGISDNNDGIMDILEDVANGTDIKDLYEIDDIIFEVDNKSLT-NRPDLWGH 175 Query: 172 RGIALDLVAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 GIA + LKE I++SC + E + L+I + LC+ ++ V+ + N Sbjct: 176 YGIAREFATIAKRPLKELPTIDLSCYDNLEKVDLKI-----EDELCQRYSSLKVENIEKN 230 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 VAP MR RL G+R I+ L D+TNY+ L+ G P H FD SR ++ + V+R Sbjct: 231 VAPMNMRIRLFYCGMRGINLLADLTNYIMLEMGQPMHAFD-SRKAEKIRVKRFDKPFTFT 289 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD E ++ + ++I + +IAGI+GG + ++TT + +E A ++ +I +S Sbjct: 290 TLDGVERNIDENTLMICNGDTPVAIAGIMGGLDSEIVEDTTTLTLESATFNAASIRKSAV 349 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNITYKPRKIVF 406 L TD+ R+E+ +D + + + L+L + G S + Y + F Sbjct: 350 RLAHRTDASARYEKSLDPEMTTVAIARFMKLLLDIDPGVKVVSSLTDEYAFHYPHIALDF 409 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR--QDVEEKADLVEEIL 464 + V + +GI++ E + L LGF V D F V VPS+R +D+ KAD++EEI Sbjct: 410 DKNFVDKYTGIEITNEHIVDTLTALGFGVTQNGDNFHVDVPSYRATKDISLKADIIEEIT 469 Query: 465 RIYGVDQIK----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN---WSFIS 517 RIYG D + S PL ++++ +N+ + +K +L R + V+ W + + Sbjct: 470 RIYGYDNFELVTTSAPLYPVRMDETKNVEDR------IKDILVKRFKLHEVHSYVWQY-A 522 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E L + +++ N + ++ +R S++P L N A DF IFEV V E Sbjct: 523 DEYKKLGMDVEENVKLANSTNPNIETLRRSIIPTQLCQVNYNTGYA-TDFGIFEVGRVVE 581 Query: 578 NDTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 +G +K + + + +E +L+ + + +D D + AL+ + Sbjct: 582 GLKEDGLCDEKKKLCITLFSKTKSLE---QLYFELRDMVAETID--DVRNKALT----YK 632 Query: 634 SLDSLRFESGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 L++ + S+ HP + ++ EI G G HP + I E+ ++ Sbjct: 633 KLEA------SHSYEHPKNLNALVLDGVEI--GKIGVAHPLVSKKIDKKAAIVFAEIDVE 684 Query: 693 SI------PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDD 746 ++ PI K V S ++ DL+F+ ++ + + ++ Sbjct: 685 ALSDIAPEPI---------KYVEPSKYPSIEVDLSFVAEKFSEINDTIK--EGAKEILKK 733 Query: 747 VTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 V V DV+ G S KS+ +++L + T ++++ ++D I+E + K Sbjct: 734 VGVSDVYSDGNS-----KSITVRLLFGDDERTLTHEEVQEVVDEIIEKLKNK 780 >gi|319956085|ref|YP_004167348.1| phenylalanyl-tRNA synthetase, beta subunit [Nitratifractor salsuginis DSM 16511] gi|319418489|gb|ADV45599.1| phenylalanyl-tRNA synthetase, beta subunit [Nitratifractor salsuginis DSM 16511] Length = 778 Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 222/838 (26%), Positives = 388/838 (46%), Gaps = 95/838 (11%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL++++D + +S + + DT SIGLEV+ + + ++LS E++PD D Sbjct: 1 MIVTRRWLEEYIDLEGISDQALHDTFNSIGLEVDSMQRHTMPEKVVVGRILSCEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G +Q+VCGA NVR A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNLCSVDVGADAPLQIVCGAANVREAEYVAVATVGAVLP-GDFAIKPAKLRGVESFGMI 119 Query: 119 CSEKELMLSDDSASIMEL--PIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L + I+ L I V G+ L DY + +D +I++ LT NR DC+ +RG+A Sbjct: 120 CSSSELGLPEMGKGIIILDKSIGELVPGKPLRDYPDFNDTVIELELTANRGDCLSIRGVA 179 Query: 176 LDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA--PN 232 DL AA L ++ P E++PL I +D + + A V P Sbjct: 180 RDLSAA----LDRPLVAQPQPKPETLPLGIARIVDLHTHGQIEAELLYDYVEKEALRLPL 235 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + RL V S S L Y + G +DA R+ D GE + L+ Sbjct: 236 LIELRLAYVDAWSESPLASHLAYATHATGVILRAYDAGRLRD---------GEGRVPLEL 286 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +E +P V + S GR+ S+ G+ DD + ++L+E + DP + + + Sbjct: 287 EE--TAPGLVEVRSAGRLLSVVGVTASAEFTADDESRELLLEASYIDPERLVPAVAAAEV 344 Query: 353 ITDS-RYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNITYKPRKIVFM 407 D+ YR RG + P + + +++ C S + Y+ R + Sbjct: 345 KPDALYYRSSRGSE-----PEIDLGMDRLMAECSRDGECRVSKTPLRIETDYEARTLAVD 399 Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 + + + G ++P+ IL+RLGF++ G + ++F V++P WR D+ D+ EEILRI Sbjct: 400 TARLNAVIGQEIPLGTVHTILKRLGFTIHGGDKERFGVTIPRWRHDIRNIQDIAEEILRI 459 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFG 525 G++ I+++PL T+ ++ S ++ R R +++ + E V ++F +++ +G Sbjct: 460 VGINNIEAKPLAFTEA-NRLTESAKRFRIRRDLRQEAVAAGFYEAVTYAFADRKKLEAYG 518 Query: 526 GGQREL--EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 E E+LNPI + + +R++L LL+A RNV +FE+ V++ + E Sbjct: 519 FPVVEASKELLNPIVEEFNTLRSTLTINLLEAAQRNVSYGKRRIPLFEIGSVFDRERRER 578 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEE----------RCRFVDLFDAKADALSVIEPFV 633 +K LWS +EE R F LF K L I Sbjct: 579 EKMTL---------------LWSGDAEEPDVGNQGKPPRIDFA-LFVRK---LGSILGEY 619 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG---FEV- 689 + R +G HP +S I + G+ + HP++ + FGL F+ Sbjct: 620 EMTECRESNG---LIHPYQSATILLHGQEA-GWVSKLHPSVAEAFGLEETFLAELDFDAL 675 Query: 690 ---YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LID 745 ++D+ P+S + T +DL+ +V++ +P G + +++++ L+ Sbjct: 676 IPPHIDAQPVSNFQGT--------------FKDLSLLVEKELPYGKMKKALESLEEPLLK 721 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D ++ + LGE +KS+ ++ +Q + T D+ I +M RI+E + + A LR Sbjct: 722 RFFPIDRYEDEQLGE-RKSMTLRFFLQSDEGTLSDEVIEGVMARILETLQSRCGAELR 778 >gi|124023184|ref|YP_001017491.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9303] gi|123963470|gb|ABM78226.1| Phenylalanyl-tRNA synthetase beta chain [Prochlorococcus marinus str. MIT 9303] Length = 815 Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 215/845 (25%), Positives = 412/845 (48%), Gaps = 71/845 (8%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER-NPDLD 59 M+ +LSWL+D + + ++E + + L+ G EVE +D+ + + +V ++ + +P+ D Sbjct: 1 MRVSLSWLQDLVQLNETVENLAEGLSMAGFEVEAIDDLASRADGVVVGLVKDHQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGAPNVR+G+ A G+ +P + + ++RG+ S GM+ Sbjct: 61 KLSVCQVDVGSGECLQIVCGAPNVRLGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMI 120 Query: 119 CSEKELML---SDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL L D A + E+ + P +G ++ L L D ++++++T NR D + + GI Sbjct: 121 CSLSELGLESNGDGIAILEEIAENVPELGQPVAPLLGLDDTVLELAITANRPDGMSMVGI 180 Query: 175 ALDLVA--AGLGKLKEINISCPLSSESIPLEIKFDLDDS---SLCKG--FAMCCVKGVRN 227 A ++ A + +L +++++ P+ F D + S+ KG + + ++ V Sbjct: 181 AREVAALTGAILQLPQLDMA--------PIHKSFKPDSTSSVSMLKGGLYGLTALENVDG 232 Query: 228 NV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI---------SDVLT 277 + +P W++QRL+ GL+S++ +VDITN V L++G P H FD + ++ Sbjct: 233 GLTSPAWLKQRLERSGLKSVNGVVDITNLVMLEQGQPLHAFDIDALELITGQTVSAESFG 292 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 +R+A + E LD + L+ + ++ ++AG+IG +G T V +E A+ Sbjct: 293 LRQARNNEVFNGLDGHQLALNENCQIVTCHDIPIALAGVIGSAESGVSAKTRRVWLESAM 352 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 + P + + + +G+ TD+ RFE+G+ ++ + + V+L+ G S+ C Sbjct: 353 FTPTAVRTTCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHL-GIKSNGCWVYGE 411 Query: 398 TYKPRKIVFMNSE-VKRLSGIDVPI--EDSLRILE---------RLGFSVIGEYDKFEVS 445 K + V + E + RL G PI E+ R LE LG + + + V Sbjct: 412 PLKTAEPVKLRREAIHRLLG---PIADENDNRYLEDDIVETSLLALGCELSPYNEGWLVI 468 Query: 446 V-PSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 V PS R+D+ + DL+EE+ R+ G D+ ++ P PL + L+ Q+ R ++++L Sbjct: 469 VPPSRRRDLSREVDLIEEVSRLVGFDRFEANLPDPL----EPGGLTTAQTAERRLRQMLC 524 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + EV S + + + + I NP+ A+ S++RT+L L+ RN+ + Sbjct: 525 GAGLQEVTTLSLVGADSD-----EPQRIAISNPLLAETSHLRTNLWEEHLRICQRNLQSS 579 Query: 564 IADFAIFEVSHVYE-NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 ++E+ +VY D Q+ + G+ E WS + + + A+ Sbjct: 580 QPGCWLYEIGNVYTVTDELINQRAVLGGVICAERRFE----RWSTSG--KIKSMTYHQAR 633 Query: 623 ADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 LS + + LD + R PS HPGRS + ++ LG FG+ HP + + L Sbjct: 634 GQ-LSQVFQGLKLDINDRPLKDNPS-LHPGRSAELFVEGKL-LGDFGQLHPALSERLDLP 690 Query: 682 NPICGFEVYLDSIPISQKKRTKTKKVVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 F + I + + + + ++ ++ DLA IV + L+ I+ Sbjct: 691 EATYLFALDFQCIIQAATRSNRWNPIFRPFPTVPAMELDLAVIVSRECSCSDLIQAIRKA 750 Query: 741 DR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + L++ V + D F+G L S A ++ + T +D + + +++ + +VK+ + Sbjct: 751 GKPLLEHVELIDRFEGGQLDHDSCSQAFRLRYRSKDSTLSEDRVNPIHEKVRQALVKQFS 810 Query: 800 AVLRS 804 A LRS Sbjct: 811 AELRS 815 >gi|220928868|ref|YP_002505777.1| phenylalanyl-tRNA synthetase subunit beta [Clostridium cellulolyticum H10] gi|219999196|gb|ACL75797.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium cellulolyticum H10] Length = 793 Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 234/833 (28%), Positives = 398/833 (47%), Gaps = 81/833 (9%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNPD 57 MK +L+W+KD++D + + ++++ T EVE+V+ ++ + + V Sbjct: 1 MKISLNWIKDYVDLEGIDIKELWYRFTMSAAEVEEVEFVGQDIKNVVVAKVLSVVPHPES 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIR--GIEST 115 I ++D+G IQ+VCGAPNV G+L P N I + K + G+ES Sbjct: 61 KKLKITQVDSGDGI-IQIVCGAPNVAEGIL---VPLVKISGSVNKIPKIGKAKLVGVESF 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII---DVSLTPNRSDCIGVR 172 GM+CS EL +SDD + ++ L D G + +++ D II + SLT NR D G Sbjct: 117 GMLCSASELGISDDHSGLLVLDGDYAPGTDIKSIIDIDDVIIEIDNKSLT-NRPDLWGHY 175 Query: 173 GIALDLVAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A +LK +N+ S S E L+I ++D+ C ++ + GV+ P Sbjct: 176 GIAREIAAIYGRELKPMNLDSLEGSEEKSKLDIT--VEDTEKCLRYSGLKIDGVKKLETP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 M+ RL G+RSIS LVD+TNY+ L+ G P H FD+ ++ + VR LD Sbjct: 234 LNMKVRLFYCGMRSISPLVDLTNYLMLEMGQPMHAFDSRQVESGIVVRSTKETTSFKTLD 293 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 E L D ++I + R +IAGI+GG+++ ++TT +L+E A ++ + +S +G Sbjct: 294 GIERKLPEDVLLICTKERPVAIAGIMGGENSEVLEDTTSILLESATFEGASTRKSSTKIG 353 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT------YKPRKIV 405 + T++ R+E+ +D + L+ V L+ + DI A +T +P I Sbjct: 354 LRTEASARYEKMLDPNMTVQALQRFVKLLRDM----QPDIEFASALTDVYCNKLEPIDIE 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR--QDVEEKADLVEEI 463 S + + G + E + IL L F V E D F V VP++R +DV K D++EEI Sbjct: 410 ITKSYIDKYIGNTLTAERMVEILRSLEFKVDVEGDTFRVKVPTFRATKDVTMKVDIIEEI 469 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT--RYVKRVLASRAMMEVVNWSFISKEQS 521 R+YG D I+ + L + + L + R VK +L+ R VN S+I + + Sbjct: 470 TRVYGYDNIQPQTLDVAL----KPLQYNEERLFDHKVKELLSERFGASEVN-SYIWYDNN 524 Query: 522 VLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G + ++++LNP + D + +R S++PG+L +N ++ DF+ FE+ ++ Sbjct: 525 FNSRAGIETKAQVKVLNPQAHDSNTLRDSMVPGMLAFAEKN-EKTYDDFSFFEIGSIFNA 583 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + + I + + +L KSE+ F DL LS I V L Sbjct: 584 ANSKEKCEQHKNI-----CVLAASKL---KSEDEL-FYDL----KGLLSFIAKTVKNIDL 630 Query: 639 RFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + + +W HP +S + + ++ +GY HP I G I E+ D + Sbjct: 631 DYTVCTKEHNWVHPVKSVDVSCNGKL-MGYLSVVHPMIKKNIGKKLNIAVLEINRDVLHN 689 Query: 697 SQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFD---- 751 ++K K K+ S +P V D +F+VD + D+L+ D+ F Sbjct: 690 IEQKAIKYKE----PSKYPEVLLDYSFLVDNSV----------TFDKLMQDIGAFKSDVL 735 Query: 752 -------VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ GK L EGKKS+ + +I + T +DI + +++ + +K Sbjct: 736 NGFEFVTIYNGKGLPEGKKSMTFRFVIGSAEKTLSSEDINAFANSLLDYMAEK 788 >gi|153827595|ref|ZP_01980262.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio cholerae MZO-2] gi|149737933|gb|EDM52838.1| phenylalanyl-tRNA synthetase, beta subunit [Vibrio cholerae MZO-2] Length = 422 Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 147/426 (34%), Positives = 232/426 (54%), Gaps = 18/426 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKV---LSVERNPD 57 MKF+ SWL++ ++ ++ +++ +T GLEV+ V F VKV + ++PD Sbjct: 1 MKFSESWLREWVNPAITTDELTHQITMAGLEVDDV--LAVAGVFDGVKVGHVVECAQHPD 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D + ++D G+ + + +VCGA N R GL A G+ +P + + K+RG S G Sbjct: 59 ADKLRVTKVDVGEEELLDIVCGAANCRQGLKVAVATVGATLP-GDFKIKKAKLRGQPSHG 117 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS EL + +S IMEL +AP+G D+L LSD IDV LT NR+DC +RG+A Sbjct: 118 MLCSFSELGIDVESNGIMELAENAPIGMDFRDFLSLSDVTIDVDLTSNRADCFSIRGLAR 177 Query: 177 DLVAAGLGKLKEINISCPLS---SESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APN 232 ++ G L +++ P + +I I D+ C + VK V P Sbjct: 178 EV-----GVLNRADVTAPAVNAIAATINDTISIDVKAPVACPRYLGRIVKNVNVQAQTPL 232 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 WM+++L+ G+RSI +VDITN+V L++G P H FD ++I + VR A EK+ LD Sbjct: 233 WMQEKLRRCGIRSIDPVVDITNFVMLEQGQPMHAFDLAKIEGGIVVRLAEQDEKLTLLDG 292 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L+ D +VIA + +IAG+ GG+H+G +T DVL+E A + P +I ++ G+ Sbjct: 293 SEAKLNADTLVIADQQKALAIAGVFGGEHSGVSTDTKDVLLECAFFAPDHIRGRARSYGL 352 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT--YKPRKIVFMNSE 410 TDS RFERGVD ++ L++ +CGG + + A + KP ++ S+ Sbjct: 353 HTDSSMRFERGVDYALQHAAMERATQLLVEICGGDVAPVVAAESAADLPKPNQVALRRSK 412 Query: 411 VKRLSG 416 + +L G Sbjct: 413 LDKLLG 418 >gi|330888321|gb|EGH20982.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 408 Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 149/401 (37%), Positives = 222/401 (55%), Gaps = 21/401 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMGGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + + +MEL DAPVG + YL L D I V LTPNR DC+ V G+A ++ Sbjct: 119 CSAAELQAGEGNDGLMELAADAPVGEDIRVYLNLDDASIVVDLTPNRGDCLSVAGLAREV 178 Query: 179 VAAGLGKLKEINISCP-------LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 G L +++ P + E P+E+ + C + ++ V + Sbjct: 179 -----GALYATDVTRPQIAAVSAVHDEVRPVEVLA----PAACPRYLGRVIRNVDLSRPT 229 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 230 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 289 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D QE L D +VIA R +IAG++GG+H+G T D+ +E A +D I++A ++ Sbjct: 290 DGQEVSLRADTLVIADHQRALAIAGVMGGEHSGVTAGTRDIFLESAFFDTISVAGKARSY 349 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 G+ TD+ +R+ERGVD Q ++ L+L + GG A I Sbjct: 350 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPI 390 >gi|116625452|ref|YP_827608.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Solibacter usitatus Ellin6076] gi|122252270|sp|Q01SP7|SYFB_SOLUE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|116228614|gb|ABJ87323.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Solibacter usitatus Ellin6076] Length = 769 Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 227/822 (27%), Positives = 369/822 (44%), Gaps = 84/822 (10%) Query: 1 MKFTLSWLKDHL----DTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERN 55 MKF+ +W+++ + LE++ T+ E E ++ + L+ + +V +VE Sbjct: 1 MKFSYNWIREFVPGLTQAAAPLERLITMKTA---ECEGIEEEGKLLTIARVARVETVEPI 57 Query: 56 PDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 PD +D G VVCGAPN R G+L +AP G + + G+ES Sbjct: 58 PDSHNVKAVVDAGPLGRKTVVCGAPNCRPGILTAYAPIGRKV-----------VSGVESD 106 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 GM+ S EL ++ D I+EL +AP+G + + ID +R D G G+A Sbjct: 107 GMLASGAELGINKDHDGIVEL--NAPLGEPIPGCEPDAAIEIDNKSITHRPDLWGHHGMA 164 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 + VAA LG + L E +P I+ ++D +LC ++ + V +P W++ Sbjct: 165 RE-VAAILGLPLTDHAKLDLLPEGVP-AIRVQIEDLALCPRYSALVFENVTVQPSPLWLQ 222 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQE 294 RL A+GL I+ +VD+TN+V + P H FDA + D + VR A +GE +AL+++E Sbjct: 223 YRLTAIGLNPINNIVDMTNFVMAELAQPMHAFDADLLKGDTIFVRPAKAGEYFVALNDEE 282 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 Y L P N+VIA ++AG+IGGK + D TT V++E A + ++ ++ + + T Sbjct: 283 YTLDPSNLVIADASGAIALAGVIGGKGSAIGDTTTRVVLESANFQASSVRKTSSAIKLRT 342 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLI------LSLCGGTASDICIARNITYKPRKIVFMN 408 D+ RFE+ D + L + L+ + L GG A R P I Sbjct: 343 DASMRFEKAQDPSNTVRGLARAIELLREISPGIRLVGGVADQ----RREIPAPPPIELPL 398 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWR--QDVEEKADLVEEILR 465 + ++R G + + RILE L F V F V+VPSWR +D+ K DLVEE+ R Sbjct: 399 AWLQRKLGRAIEASEVRRILESLAFGVSEPTPGVFSVTVPSWRATKDISIKDDLVEEVGR 458 Query: 466 IYGVDQIKSE-PL-PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 + G D I + PL P + + Q V+ + EV N+SF+S+ Sbjct: 459 MIGYDSIAPQAPLVPASVPPGNPSRRFQHD----VRNLFVDNGFTEVYNYSFLSEASVRA 514 Query: 524 FGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS-HVYENDT- 580 FG + + NPI++D MR+SLLPG+ + N F +FE+ ++ DT Sbjct: 515 FGFDSASMIRVTNPIASDQELMRSSLLPGIWRNVTENAKHH-ESFRLFEIGLEIHRRDTG 573 Query: 581 -PEGQKYMAAGI--RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 P ++ A R+G +G L+ K RC + A A Sbjct: 574 LPNEIPHLIAAYYDRQG----DGQPGLFELKRLARCLMPNAQTVPAAARE---------- 619 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD-SIPI 696 FE H R+ I+ + + V G E HP +++ G LD + + Sbjct: 620 --FE-------HTARAAEIQVAGQTV-GRLFELHPKLVE--------TGRAAILDLDLRL 661 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQG 755 Q + + DL+ + AGTL I + L + + + G Sbjct: 662 VQSLTAGETRYTPIRRYPSSAFDLSVLAGLREQAGTLQAAIASFAGPLQESIQFVRQYVG 721 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L +G KSV+ ++ + + T ++I + + I+E + K Sbjct: 722 PPLADGVKSVSFRLTVGSPERTLSSEEITAVRNAIIEGMRAK 763 >gi|45602287|gb|AAS71764.1| phenylalanyl-tRNA synthetase beta chain [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 801 Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 227/807 (28%), Positives = 389/807 (48%), Gaps = 72/807 (8%) Query: 25 LTSIGLEVEKVDNREALSP----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGA 79 L I + V ++D+ P IV++ S+E++P D I ++ G + Q+V G Sbjct: 16 LKKIAISVCEIDDATEFRPELDFVKIVRIESLEKHPSADKLQIAQVFDGSSKS-QIVTGV 74 Query: 80 PNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP-I 138 NV++G L A PG+ + + ++ + ++RG++S+GM+CSEKEL LS++ + L + Sbjct: 75 TNVKIGDLVPLAIPGAKLGDKEILES--ELRGVKSSGMLCSEKELFLSEEGNGVWILNGL 132 Query: 139 D-APVGGRLSDYLELSDPIIDV---SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP 194 D A VG + +L +D I +V S+T +R D G A +L + + P Sbjct: 133 DQAEVGKTIRSFLYYNDIIFEVDNKSIT-HRPDLWSHFGFARELAS---------QLRLP 182 Query: 195 LSSESIPLEIKFDLD-------DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + FDL ++ + + GV + + RL+ G+R I+ Sbjct: 183 IVFNPFESLWNFDLSVKLPKVLENQNAHSYYASSISGVSVFPSKRKFQSRLQKCGVRVIN 242 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISD----VLTVRRACSGEKILALDNQEYDLSPDNVV 303 +VD++NYV L+ G P+H FD + + L V A GE LD L + ++ Sbjct: 243 NVVDVSNYVMLEMGQPTHFFDKKFLENQGGISLEVSFAKKGESFALLDETSPALEEEVLL 302 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 I + G+ +IAG++GGK + + TT++++E A++ I +S ++ GI +DS R+E+G Sbjct: 303 IRNQGKPVAIAGVMGGKESAVQNTTTEIVMESAVFMRERIRKSIRSTGIRSDSSVRYEKG 362 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GIDVP 420 ++ +PV++ ++L L G + + P K V +++++ ++ G+ + Sbjct: 363 LEATTTLPVIRRALNL-LKENGCSELKASEPVGFLHIPHKEVRIHTDIHFINAKLGVTLS 421 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQ--DVEEKADLVEEILRIYGVDQIKSEPLP 478 D ILERL F V + + EV VP +R DV DLVEEI R G D I+ PL Sbjct: 422 QGDITDILERLHFIVSWKGEHLEVLVPKFRHNYDVTIPEDLVEEIGRTKGYDTIQVSPL- 480 Query: 479 LTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 L +V+ RNL+ + R +A + EV N+SF S +++ G + ++I N + Sbjct: 481 LAEVKTPIRNLNRELERKCKTFFAIALK-YHEVFNYSFQSYKENEFSGDPKLSVKIKNEM 539 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-DTPEGQKYM---AAGIRK 593 + S +R SLLP LLK T N DR ++ IFE VY N PE +K + A + K Sbjct: 540 PEEQSVLRNSLLPSLLKNTRTNQDR-FSEIKIFEFGRVYFNLPEPENEKKIFAFAVSLDK 598 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG-- 651 SS E +L + D K + S +E + + ++ + +HPG Sbjct: 599 KSS--EPDLKLLEE---------DFLKIKKEVESFLES-IQIYEYTWKIQQETIFHPGAN 646 Query: 652 -----RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 RSG K E ++G G HP ILD F L + + I + K + Sbjct: 647 LCLVARSG--KDGLETIVGNLGYVHPAILDSFELKKRVIYGSFEFERIVELWNQNRKVSR 704 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL--IDDVTVFDVFQGKSLGEGKKS 764 V S + DL+ +V + +++K ++R+ + + V+ F G ++ EGKKS Sbjct: 705 FVTPSQFPEAEIDLSILVGEKENTNVFTDLVK-LERIPELKEGWVYSQFMGGNVPEGKKS 763 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIV 791 V+ + + + TF + I+ + D++V Sbjct: 764 VSYRFRLVNYERTFTQERIKEISDQLV 790 >gi|317497547|ref|ZP_07955865.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895106|gb|EFV17270.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 679 Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 202/716 (28%), Positives = 335/716 (46%), Gaps = 65/716 (9%) Query: 117 MMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 MMCS +EL S D I D G + L L D +++ +T NR DC Sbjct: 1 MMCSIEELGSSRDMYPEAPEYGIYIFNKDVKPGDDAVEALGLRDAVVEFEITSNRVDCFS 60 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 + G+A + A ++ + E + IK ++D LC + VK ++ + Sbjct: 61 MIGMAREAAATFKKDFFPPVVTKTGNDEDVHDYIKVRVEDEDLCPRYTARVVKNIKLAPS 120 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV-LTVRRACSGEKILA 289 P WM++RL A+G+R I+ LVDITNYV + G P H +D I++ + VRRA +G+K Sbjct: 121 PEWMQRRLAAMGIRPINNLVDITNYVMEEFGQPMHAYDLDTIANKEIVVRRAKAGDKFTT 180 Query: 290 LDNQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD +E + +NV++ DG + IAGI+GG+++ D+ +L E A +D NI S K Sbjct: 181 LDGEERTMD-ENVLMICDGEKEIGIAGIMGGENSMVTDDIKTLLFEAACFDGTNIRLSSK 239 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 +G+ TD+ +FE+G+D + + + LI L G + A ++ P K + + Sbjct: 240 RIGLRTDASGKFEKGLDPENAMAAMDRACQLIEELGAGEV--VGGAVDVYPNPVKQIRLP 297 Query: 409 SEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKF--EVSVPSWRQDVEEKADLVEEI 463 EV +++ G +V E+ L R+ YD+ EV VPS+RQD+ ADL EE+ Sbjct: 298 LEVDKMNALLGTNVSKEEVLEYFGRIDLG----YDEATNEVIVPSFRQDLHRMADLAEEV 353 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFISKE--Q 520 R YG D I P+ L E + R V R +A + + +SF S + Sbjct: 354 ARFYGYDNI---PVTLPNGESTAGKKPFKIRVEDVCRNVAEQNGFCGGMTYSFESPKVFD 410 Query: 521 SVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY- 576 +L +E +EI NP+ D S MRT L G+L + N+ + ++E ++Y Sbjct: 411 KLLLDENAKERQAIEISNPLGEDFSIMRTVSLNGMLTSLSTNLAHRNKNVRLYEFGNIYI 470 Query: 577 -----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 + P+ + M G+ C F L D L + Sbjct: 471 PKSLPLTELPDERMQMTLGMYG------------------ECDFFTLKGVVEDMLDSLG- 511 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + S +G + HPGR+ + E + Y G+ HP ++D + + EVY+ Sbjct: 512 -LGGRSEYAPTGEHPFLHPGRAADVTIDGEKI-AYIGQIHPEVMDNYNMKG-----EVYV 564 Query: 692 DSI--PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVT 748 I P K T +K ++ +KRDL+ ++ + I G L I K+ +L++ Sbjct: 565 AVIDMPTLVPKATFDRKYEGVAKFPAMKRDLSMVMKKDIFVGQLEKIFKDKGGKLLESYE 624 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +FDV++G + +G KSVA + + T D ++ ++++I++ +KK LR+ Sbjct: 625 LFDVYEGDQIEKGYKSVAYSLTFRAKDRTLEDAEVSKIVEKILDE-LKKLGVELRA 679 >gi|33863010|ref|NP_894570.1| phenylalanyl-tRNA synthetase subunit beta [Prochlorococcus marinus str. MIT 9313] gi|41018294|sp|Q7V7K5|SYFB_PROMM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|33634927|emb|CAE20913.1| Phenylalanyl-tRNA synthetase beta subunit [Prochlorococcus marinus str. MIT 9313] Length = 815 Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 209/840 (24%), Positives = 403/840 (47%), Gaps = 61/840 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER-NPDLD 59 M+ LSWL+D + + ++E + + L+ G EVE +D+ + + +V ++ + +P+ D Sbjct: 1 MRVPLSWLQDLVQLNETVEILAEGLSMAGFEVEAIDDLASHAQGVVVGLVKDHQPHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGAPNVR+G+ A G+ +P + + ++RG+ S GM+ Sbjct: 61 KLSVCQVDVGSGEGLQIVCGAPNVRIGIHVPVAMVGATLPAVGIKIKASELRGVPSQGMI 120 Query: 119 CSEKELMLSDDSASIM---ELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 CS EL L + I E+ + P +G + L L D ++++++T NR D + + GI Sbjct: 121 CSLAELGLESNGNGIAILEEIAENVPDLGQPVGPLLGLDDTVLELAITANRPDGMSMVGI 180 Query: 175 ALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDS---SLCKG--FAMCCVKGVRNNV 229 A ++ A L ++ P + P+ F+ D + S+ KG + + ++ V + Sbjct: 181 AREVAA-----LTGASLQLP-QLDMAPIHKSFEPDSTSSASMLKGGLYGLTALENVDGEL 234 Query: 230 -APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI---------SDVLTVR 279 +P W++QRL+ G +S++ +VDITN V L++G P H FD + ++ +R Sbjct: 235 TSPAWLKQRLERSGCKSVNGVVDITNLVMLEQGQPLHAFDIDALEMITGQTVSAESFGLR 294 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 +A + E LD + L+ + ++ ++AG++G +G T V +E A++ Sbjct: 295 QARNNELFNGLDGHQLQLNENCQIVTCHDIPIALAGVMGSAESGVSAKTRRVWLESAMFT 354 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 P + + + +G+ TD+ RFE+G+ ++ + + V+L+ G S+ C + Sbjct: 355 PTAVRTTCRAVGLRTDASSRFEKGLPVEMTLASARRAVTLMEEHL-GIKSNGCWVYGESP 413 Query: 400 KPRKIVFMNSE-VKRLSGIDVPIEDSLRILE---------RLGFSVIGEYDKFEVSV-PS 448 K + V + E + RL G + +E+ R LE LG + + + V V PS Sbjct: 414 KSAEPVKLRREAIHRLLG-PIGVENDNRYLEDDIIETSLLALGCELSPYNEGWLVIVPPS 472 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 R+D+ + DL+EE+ R+ G D+ ++ P PL + L+ Q+ R ++++L + Sbjct: 473 RRRDLSREVDLIEEVSRLVGFDRFEANLPDPL----EPGGLTTAQTAERLLRQMLCGAGL 528 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 EV S + + + + I NP+ A+ S++RT+L L+ RN+ + Sbjct: 529 QEVTTLSLVGADSD-----EPQRIAISNPLLAETSHLRTNLWEEHLRICQRNLQSSQPGC 583 Query: 568 AIFEVSHVYE-NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 ++E+ +VY D Q+ + G+ E WS + + + A+ L Sbjct: 584 WLYEIGNVYTVTDELINQRAVLGGVICAERSFE----RWSTSG--KIKSMTYHQARGQ-L 636 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 S + + LD HPGRS + ++ LG FG+ HP + + L Sbjct: 637 SQVFQGLKLDINDRPLKDNHSLHPGRSAELFVEGKL-LGDFGQLHPALSERLDLPEATYL 695 Query: 687 FEVYLDSIPISQKKRTKTKKVVH-LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LI 744 F + L I + + + ++ ++ DLA IV + L+ I+ + L+ Sbjct: 696 FALDLQCIIQAATRSNRWNPTFRPFPTVPAMELDLAVIVSKECSCSDLIQAIRKAGKPLL 755 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + V + D F+G L S A ++ + T +D + + +++ + +VK+ +A LRS Sbjct: 756 EHVELIDRFEGGQLDPYSCSQAFRLRYRSKDRTLSEDKVNPIHEKVRQALVKQFSAELRS 815 >gi|58696897|ref|ZP_00372405.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] gi|58536881|gb|EAL60075.1| phenylalanyl-tRNA synthetase, beta subunit [Wolbachia endosymbiont of Drosophila simulans] Length = 354 Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 147/351 (41%), Positives = 214/351 (60%), Gaps = 12/351 (3%) Query: 35 VDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPP 93 +DN + L+ F + +VL V ++P+ D + ++D G + +Q+VCGA NVR G+ V A Sbjct: 2 IDNTK-LAGFIVAEVLEVIQHPNADKLKLCKVDDG-SKILQIVCGANNVREGMKTVLASL 59 Query: 94 GSCIPENNMIVNVRKIRGIESTGMMCSEKELML-SDDSASIMELPIDAPVGGRLSDYLEL 152 GS +PE++ + KIRG+ S GM+CS EL L ++S I+EL D VG + + Sbjct: 60 GSTLPESDFTIKPTKIRGVLSEGMLCSASELALVQEESEGIIELSDDYKVGDKFFN---- 115 Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS 212 DP+ID+++TPNR DC+G+ GIA DL A G+G LK ++I S + P++++ D S Sbjct: 116 CDPVIDINVTPNRGDCLGIYGIARDLAATGIGTLKTLSIPQLTSFINSPIDVEV-TDGES 174 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 G + V+N +P W++ RL+++G+RSISA+VDITNY+ + P H +DA +I Sbjct: 175 FISGIY---IANVKNQESPKWLKDRLESIGMRSISAIVDITNYIMISFSRPMHAYDAKKI 231 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 LTVR+A GEK L+ +EY L+ D VIA D I IAGIIGGK + C TTD+ Sbjct: 232 EGELTVRKANDGEKFAGLNGKEYLLNKDISVIAGDKNIHGIAGIIGGKCSECTLETTDIF 291 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 +E A +DPI+I +S + LGI TD+ YRF R VD L +IL L Sbjct: 292 LESAWFDPISITKSSRQLGISTDASYRFARSVDPGFTFDGLNLAAKMILDL 342 >gi|314919430|gb|EFS83261.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL050PA1] gi|328757796|gb|EGF71412.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL025PA2] Length = 646 Score = 236 bits (603), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 193/673 (28%), Positives = 314/673 (46%), Gaps = 64/673 (9%) Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSSLCKGFAMCCVKGVR 226 + +RGIA ++ A ++ P E I P+ +D S C F V G+ Sbjct: 1 MSMRGIAREVAHA-----MSVHFRDPYDEEPIGPVLGPVAVDVQSDACSQFIALPVSGMN 55 Query: 227 -NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA +S + VR+A GE Sbjct: 56 LGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADNVSGTIVVRKAHEGE 115 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +L LD+ + L PD++VIA D +AG++GG TT +++E A +DP+ +AR Sbjct: 116 HLLTLDDTDRTLDPDDLVIADDSGAIGLAGVMGGAATEVTAETTSIILEGAHFDPMTVAR 175 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGGTASDICIARNITYK 400 + + + +++ RFERGVD P+ H + L+ G T + + + Sbjct: 176 AYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGATVGEPTVVGEVPEM 230 Query: 401 PRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 PR+ + N+++ R+ G VP E+ + IL R G V D + P+WR D+ + D Sbjct: 231 PRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVAPTWRPDLVDAYDY 288 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-K 518 VEEI R G D+IK+ P L+ Q R V R + +E++ FI K Sbjct: 289 VEEIGRKIGFDRIKAVLPPSLGAS---GLTKAQRGRRRVLRSVVEAGFVELITLPFIGDK 345 Query: 519 EQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + VL G +++ NP+ +RT+LLPGL A N+ R+ D A+FE Sbjct: 346 DLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMSRSQDDLAVFESGT 405 Query: 575 VYENDTP------------------EGQKYMAAGIRKGSSGIEGS--GRLWSDKS-EERC 613 V+ TP E + A R ++ I GS W +S + Sbjct: 406 VFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWLPDRWDGESVKADW 465 Query: 614 RFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 R L K ADAL V L ++ + +HPGR + + V+G+ GE HP Sbjct: 466 RHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIVDGK-VIGHAGELHP 516 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 ++ GL C E LD++ + + +V+ +SS K D+A +VD+ + A Sbjct: 517 TVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKEDVALVVDKSVAAED 573 Query: 733 LVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + +I+ L++ V +FDV++G+ +G+ +KS+A + ++ T D + D V Sbjct: 574 VRQALIEGAGPLLESVELFDVYEGEQVGDNRKSLAFNLRLRGADRTLTDSEALETRDAAV 633 Query: 792 ENVVKKTNAVLRS 804 + A LRS Sbjct: 634 ARAEETCGAQLRS 646 >gi|225873445|ref|YP_002754904.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] gi|225791595|gb|ACO31685.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium capsulatum ATCC 51196] Length = 688 Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 191/675 (28%), Positives = 324/675 (48%), Gaps = 57/675 (8%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 + ++ +T NR D + G+A + LK ++ S P ++ +++ +LC Sbjct: 45 VFEMDVTTNRVDAMNHYGVAREASIIFGCALKPLDGSLPAPKPGSAFPVR--IEEPTLCG 102 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 F ++GV + + +R A+ + IS VD TN+V+L G+P+H FD ++ Sbjct: 103 RFTARVLRGVTIQPSHGIVAERFAALEQKLISNAVDATNFVTLGMGHPTHAFDLDKLEGG 162 Query: 276 LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + VRRA GEK++ LD E L PD++V+A + + +AG++GG +T ++LVE Sbjct: 163 IVVRRARKGEKLVTLDGVERTLDPDDLVVADEKKAVGLAGVMGGLDTAISASTKNILVEA 222 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS----DI 391 A +D + RS + GI TD+ +RFERG D P+ +VS I+ GG D+ Sbjct: 223 AWFDQNTVRRSSRRHGIHTDASHRFERGADFNAP-PLANALVSRIILEAGGHIEGELVDV 281 Query: 392 CI--ARNITYKPRKIVFMNSEVKRLSGID-----VPIEDSLRILERLGFSV--IGEYDKF 442 I A T K + F E+ R+ G + D+ IL LG ++ GE + Sbjct: 282 LIPEAEARTAKRAAVSFAVPEIARILGATEDPQGITAADAEGILTGLGCTLEKSGE-QSY 340 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V++PSWR D+E + DL+EEI R+YG ++ ++ LP T L ++ ++ L Sbjct: 341 SVTLPSWRLDLEREIDLLEEIARVYGYNRFQNT-LP-TFAGSVVELPW-AAKEATLRGKL 397 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGR 558 E ++ +F ++ ++ F RE + + NP+S + +R SLLPG+L Sbjct: 398 LGLGWNEAISSTFCAEADALAF---CREPNSAVAVGNPLSEEAGMLRPSLLPGMLTMLAN 454 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVD 617 N+ R + A+FE+ V+ T + + A I G++G G+G VD Sbjct: 455 NLSRDVESVALFEIGTVFTGSTEKVDERPALAI--GATGRPFGAGE------------VD 500 Query: 618 LFDAKADALSVIEPFVS----LDSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 +D K ++ F + D ESG P+W HPGRS V GYFG+ HP Sbjct: 501 FYDLKGTLQELLHSFTARSLYFDRFPAESGLMPAWLHPGRSARAVIDGATV-GYFGQLHP 559 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 + + + E+YLD + K+ +T + LS V+RD +F+V + G Sbjct: 560 AEAERRKVKQTVLVGELYLDRL---YKQSLRTPVIEELSRYQAVRRDFSFLVPDAVSWGQ 616 Query: 733 LVNIIKNVDRLIDDVTVF---DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L I V I ++ F ++ +G+ + G S+ + + Q + T RD+D++ + Sbjct: 617 LAEAI--VALPIPELRSFAPREILRGERVAAGHYSLLLGTVFQSHERTLRDEDLQAWAQQ 674 Query: 790 IVENVVKKTNAVLRS 804 ++ ++ A LRS Sbjct: 675 VI-AAMQDRGAQLRS 688 >gi|328914343|gb|AEB55176.1| phenylalanyl-tRNA synthetase, beta subunit [Chlamydophila psittaci 6BC] Length = 814 Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 207/812 (25%), Positives = 370/812 (45%), Gaps = 55/812 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ +LS L+ + +S+++I + IG+E E ++ + S +I+ K++ +P+ Sbjct: 21 MRVSLSSLQRFFSSPLSIKQIIEACDHIGIETE-IETLLSCSFSSIITAKIIKTLPHPNA 79 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 D ++ QE QVVCGAPN R ++ A PG+ + + N + K+RG+ES Sbjct: 80 DRLVVATLFDGKQEHQVVCGAPNCRPDIIVPLALPGAKLHDHEGNPYTIKKSKLRGVESQ 139 Query: 116 GMMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + E P P+G S L+D I+ LTPN C + Sbjct: 140 GMCCGTDELGFSHLQKTERGLFEFPEGTPLGE--SACALLADTSIEFCLTPNLGHCASLL 197 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEI---KFDLDDSSLCKGFAMCCVK--GVRN 227 G+A ++ + +++ P PLE + D S+C F CCVK GV + Sbjct: 198 GLAREI-----AHVANVDLILPEEFSFAPLETIPKEHASHDQSICPIF--CCVKISGVSS 250 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P ++Q L + +SI+ +VDITNY+ L G P HV+DA + D L +A Sbjct: 251 ETSPQELQQALSQLKQKSINTIVDITNYIMLALGQPLHVYDAKTVDIDSLRAEKAKEKHY 310 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+N+E + +I +AG++G + ++ TTD+++E A + P I S Sbjct: 311 LKLLNNEEVLVPQGTAIICDKNHTVGLAGVMGSLDSSFNETTTDIILEAAYFLPKAIRAS 370 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIV 405 ++ + +++ YRF RG + ++P L + I L S I + ++ P + Sbjct: 371 QTHIPLHSEAAYRFTRGSNPDNVLPSLYAAIHYIQKLFPNAKVSPIHVVGSVPQSP-TLT 429 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEI 463 ++R+ G + L LGF+V + D+ V VPS+R D+ E+ DLVEEI Sbjct: 430 LRTEMIERVLGATLSQSQVHEELVSLGFTVTSQ-DQGILSVHVPSYRHDIREEIDLVEEI 488 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R ++P + + + + + R + LA + + + E + L Sbjct: 489 CR--------TQPWKIEKNKTPATYTPLYAFKREIVDFLAQSGLQQFFTCDLLDIETAAL 540 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + + S + +R SLLPGLLK+T N++R FE+ VY + Sbjct: 541 HRQETDYIALQG--SKHATVLRDSLLPGLLKSTATNLNRQAPYVHAFELGTVYTKKGSQY 598 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 Q+ + GI + G+ S ER + + K + F +S + Sbjct: 599 QETQSLGII-----LSGAAEELSWVCHERA--LSFYSIKGWVERLFRHFHISSTAYTIRP 651 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +HP + I + LG FG HP + + + + E+ +DS+ +QKK Sbjct: 652 SEHPNFHPYQQAEIYLHKHL-LGRFGTLHPQLCKKAQIKHSVFFAELSVDSLLHTQKKAI 710 Query: 703 KTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLG 759 + ++ SS RD+ VD+ IPA +L ++ + ++ V++ ++Q K+ Sbjct: 711 PRYQPYPIYPSSF----RDITLTVDESIPADSLRKKLLSFHSKWLESVSIISIYQNKNPT 766 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + +I +R++ Sbjct: 767 VQNKNVSLRLVFQDKERTLSNQEIEEEHERLL 798 >gi|329942468|ref|ZP_08291278.1| phenylalanyl-tRNA synthetase, beta subunit [Chlamydophila psittaci Cal10] gi|332287105|ref|YP_004422006.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila psittaci 6BC] gi|313847701|emb|CBY16689.1| phenylalanyl-tRNA synthetase beta chain [Chlamydophila psittaci RD1] gi|325506766|gb|ADZ18404.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydophila psittaci 6BC] gi|328815378|gb|EGF85366.1| phenylalanyl-tRNA synthetase, beta subunit [Chlamydophila psittaci Cal10] Length = 794 Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 207/812 (25%), Positives = 370/812 (45%), Gaps = 55/812 (6%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDL 58 M+ +LS L+ + +S+++I + IG+E E ++ + S +I+ K++ +P+ Sbjct: 1 MRVSLSSLQRFFSSPLSIKQIIEACDHIGIETE-IETLLSCSFSSIITAKIIKTLPHPNA 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE---NNMIVNVRKIRGIEST 115 D ++ QE QVVCGAPN R ++ A PG+ + + N + K+RG+ES Sbjct: 60 DRLVVATLFDGKQEHQVVCGAPNCRPDIIVPLALPGAKLHDHEGNPYTIKKSKLRGVESQ 119 Query: 116 GMMCSEKEL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM C EL L + E P P+G S L+D I+ LTPN C + Sbjct: 120 GMCCGTDELGFSHLQKTERGLFEFPEGTPLGE--SACALLADTSIEFCLTPNLGHCASLL 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEI---KFDLDDSSLCKGFAMCCVK--GVRN 227 G+A ++ + +++ P PLE + D S+C F CCVK GV + Sbjct: 178 GLAREI-----AHVANVDLILPEEFSFAPLETIPKEHASHDQSICPIF--CCVKISGVSS 230 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEK 286 +P ++Q L + +SI+ +VDITNY+ L G P HV+DA + D L +A Sbjct: 231 ETSPQELQQALSQLKQKSINTIVDITNYIMLALGQPLHVYDAKTVDIDSLRAEKAKEKHY 290 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 + L+N+E + +I +AG++G + ++ TTD+++E A + P I S Sbjct: 291 LKLLNNEEVLVPQGTAIICDKNHTVGLAGVMGSLDSSFNETTTDIILEAAYFLPKAIRAS 350 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC-GGTASDICIARNITYKPRKIV 405 ++ + +++ YRF RG + ++P L + I L S I + ++ P + Sbjct: 351 QTHIPLHSEAAYRFTRGSNPDNVLPSLYAAIHYIQKLFPNAKVSPIHVVGSVPQSP-TLT 409 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEI 463 ++R+ G + L LGF+V + D+ V VPS+R D+ E+ DLVEEI Sbjct: 410 LRTEMIERVLGATLSQSQVHEELVSLGFTVTSQ-DQGILSVHVPSYRHDIREEIDLVEEI 468 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 R ++P + + + + + R + LA + + + E + L Sbjct: 469 CR--------TQPWKIEKNKTPATYTPLYAFKREIVDFLAQSGLQQFFTCDLLDIETAAL 520 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + + S + +R SLLPGLLK+T N++R FE+ VY + Sbjct: 521 HRQETDYIALQG--SKHATVLRDSLLPGLLKSTATNLNRQAPYVHAFELGTVYTKKGSQY 578 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFES 642 Q+ + GI + G+ S ER + + K + F +S + Sbjct: 579 QETQSLGII-----LSGAAEELSWVCHERA--LSFYSIKGWVERLFRHFHISSTAYTIRP 631 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 +HP + I + LG FG HP + + + + E+ +DS+ +QKK Sbjct: 632 SEHPNFHPYQQAEIYLHKHL-LGRFGTLHPQLCKKAQIKHSVFFAELSVDSLLHTQKKAI 690 Query: 703 KTKK--VVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLG 759 + ++ SS RD+ VD+ IPA +L ++ + ++ V++ ++Q K+ Sbjct: 691 PRYQPYPIYPSSF----RDITLTVDESIPADSLRKKLLSFHSKWLESVSIISIYQNKNPT 746 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 K+V+++++ Q + T + +I +R++ Sbjct: 747 VQNKNVSLRLVFQDKERTLSNQEIEEEHERLL 778 >gi|166033125|ref|ZP_02235954.1| hypothetical protein DORFOR_02847 [Dorea formicigenerans ATCC 27755] gi|166027482|gb|EDR46239.1| hypothetical protein DORFOR_02847 [Dorea formicigenerans ATCC 27755] Length = 814 Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 219/860 (25%), Positives = 384/860 (44%), Gaps = 101/860 (11%) Query: 1 MKFTLSWLKDHLD--TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPD 57 MK +LSW+KD ++ D+ ++++ LT +EVE V+ +V V+ +E +P+ Sbjct: 1 MKLSLSWIKDFVNIPEDMDMKQLAYDLTMDTVEVEDVEYLADRFDHMVVGVIEDIEPHPN 60 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN----MIVNVRKIRGI 112 D + ++D G + +VCG N+ G+ + PG+ + + + + K+RG+ Sbjct: 61 ADKLRVCKVDIGDGEIKDIVCGGINLEKGMRVAVSCPGAIVRWHGEGEPVEIKKSKLRGV 120 Query: 113 ESTGMMCSEKELMLSD-----DSASIMEL-PIDAPVGGRLSDYLELSDPIIDV---SLTP 163 S GM+C+ E+ L D A I++L D P G L+D L+L+D ++++ S+T Sbjct: 121 ASYGMICASDEIGLGDLFPASQEAEILDLSAFDVPAGTTLADALDLNDVLLEIDNKSMT- 179 Query: 164 NRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 NR D G GIA ++ A L EI P ++ + + ++ D C + + Sbjct: 180 NRPDLWGHYGIAREIAALYNLPLAEIK---PFETD-VQSDFNVEIADPDRCPRYIGVEMS 235 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 GV AP M+ R+ VG+R I+ALVDITNYV L G P+H FDA ISD + VR A Sbjct: 236 GVNVKEAPYQMQSRIWKVGMRPINALVDITNYVMLATGNPTHAFDADNISDHIVVRHAAE 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 EK+L L+++E L D++VI ++AG++GG T V++EVA ++ I Sbjct: 296 NEKLLLLNDKELSLCTDDLVITDSEGPVALAGVMGGAKDSILPKTERVILEVANFEAAGI 355 Query: 344 ARSGKNLGIITDSRYRFERGVDL----QGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 R+ T++ R+E+ +D Q + +++ L + + C Sbjct: 356 RRTALRYDNRTEASSRYEKAIDPERCDQALALSMQYFKELYPEM---KVTGYCDKYVKKL 412 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ--DVEEKA 457 K +I +++ G + ++ LE+LGF V + V P+WR D+ K Sbjct: 413 KRAEIDVNLVWLEKRLGKHLTNDEIQGKLEKLGFDVQINGEDMHVIAPTWRSTGDISIKD 472 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR-AMMEVVNWSFI 516 D++EE+ R+YG D EP T D Q R +K LA R M E+ + ++ Sbjct: 473 DVMEEVARMYGYDNF--EPTSFTTTFDSAINQKDQDLVRNMKEFLAIRCGMQEIYTYPWV 530 Query: 517 SKEQ-SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + + + + L + P + D+S +R SLLP + +A +N +R DF+IFE + V Sbjct: 531 NDVYLNAIMQTTEGMLRLSTPPAPDLSYLRASLLPNICEAVAKN-ERYFNDFSIFEEAQV 589 Query: 576 YENDT-----------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 + + PE ++Y+A ++ +LF Sbjct: 590 FHDANYTSPYDKSELLPEQRRYIAGAFASSVKDVK-----------------ELFQEAKG 632 Query: 625 ALSVIEPFVSLDSLRF-ESGAPSWYHP-------------GRSGIIKTSAEIVLGYFGEF 670 L + + + F + P W G G++ A + G Sbjct: 633 VLEYMPRYTHQAAFEFRKEEKPVWADNVVWLNIYRGDEKIGDMGLLAKKASMDCG----- 687 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKR--TKTKKVVHLSSLHPVKRDLAFIVDQHI 728 I V L + + + K ++T K HL++ + D++ + D + Sbjct: 688 -------------IKNLSVMLFELDVLKLKPLISRTNKFTHLAAYPENEYDISMLFDSNA 734 Query: 729 PAGTLVNII---KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 + I K + D ++GK + +GKKSV I++ I + T +I Sbjct: 735 VWSDMHEAILGKKKASEFLKKADFVDEYRGKQIPQGKKSVTIRLTIGSNEKTLTSQEIES 794 Query: 786 LMDRIVENVVKKTNAVLRSS 805 + +++++ + KK A LR+ Sbjct: 795 VANQVMKKLQKKMGAELRTQ 814 >gi|99034339|ref|ZP_01314371.1| hypothetical protein Wendoof_01000830 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 364 Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 143/385 (37%), Positives = 208/385 (54%), Gaps = 30/385 (7%) Query: 425 LRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 L IL +LGFS+ + + + V VPSWR DV ADL+EE+ RIYG D+IK EPLP Sbjct: 3 LDILTKLGFSIDKKTEGNWNVQVPSWRPDVTIPADLIEEVTRIYGYDKIKEEPLP----- 57 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSN 543 N+ S ++ ++ +R EV+ WSF+S+ + FG + I NP + + Sbjct: 58 --NNVEEVDSTYDNLRILMTNRGFHEVLTWSFMSESTAEKFGYSNKLFIIDNPFNNSFNI 115 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGR 603 MR S++P LL+ T N+ I+D AIFE+ +Y D KY+ +GIR G++ Sbjct: 116 MRPSIMPNLLQVTADNIAHGISDLAIFEIGPIY--DGEAQSKYVLSGIRSGNN------- 166 Query: 604 LWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 R VD+FDAKAD ++ +E F V+ D+L E YHPG+SG + + Sbjct: 167 -LPRNHYNTDRKVDVFDAKADCIAALEFFNVNCDNLTIEKAEKEHYHPGKSGTLSFKNK- 224 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSLHPVKRD 719 V GYFGE HPNILD F + + GFEV L++I P+S+KK K VKRD Sbjct: 225 VAGYFGELHPNILDLFDIKQKVVGFEVILENIENLPVSRKKFIDYK-------YQSVKRD 277 Query: 720 LAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 AFIV++ + G ++N+IK LI +V +FDV+ G ++ K S+A+ V T Sbjct: 278 FAFIVNKDVEVGNIINVIKKSSELITEVLIFDVYHGNNIEPNKMSIALSVTFCSPIHTLT 337 Query: 780 DDDIRILMDRIVENVVKKTNAVLRS 804 + +I+ IV V + T LR+ Sbjct: 338 EKEIQKESSAIVNLVCENTGGTLRT 362 >gi|314923952|gb|EFS87783.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL001PA1] Length = 646 Score = 234 bits (596), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 193/673 (28%), Positives = 313/673 (46%), Gaps = 64/673 (9%) Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLD-DSSLCKGFAMCCVKGVR 226 + +RGIA ++ A ++ P E I P+ +D S C F V G+ Sbjct: 1 MSMRGIAREVAHA-----MSVHFRDPYDDEPIGPVLGPVAVDVQSDACSQFIALPVSGMN 55 Query: 227 NNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 P ++ R+ G+R I+ +VD+TNYV L+ G P H +DA +S + VR+A GE Sbjct: 56 PGAPTPRFITDRITRAGMRPINLVVDVTNYVMLESGQPLHAYDADNVSGTIVVRKAHEGE 115 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 +L LD+ + L PD++VIA D +AG++GG TT +++E A +DP+ +AR Sbjct: 116 HLLTLDDTDRTLDPDDLVIADDLGAIGLAGVMGGAATEVTAETTSIILEGAHFDPMTVAR 175 Query: 346 SGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGGTASDICIARNITYK 400 + + + +++ RFERGVD P+ H + L+ G T + + + Sbjct: 176 AYRRHKLGSEASRRFERGVD-----PICAHTAAVRAAELLAQYGGATVGEPTVVGEVPEM 230 Query: 401 PRKIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 PR+ + N+++ R+ G VP E+ + IL R G V D + P+WR D+ + D Sbjct: 231 PRQTI--NADLPNRILGTKVPTEEVIEILTRSGVKVTALGDSLHLVAPTWRPDLVDAYDY 288 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-K 518 VEEI R G D+IK+ P L+ Q R V R + +E++ FI K Sbjct: 289 VEEIGRKIGFDRIKAVLPPSLGAS---GLTKAQRGRRRVLRSVVEAGFVELITLPFIGDK 345 Query: 519 EQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + VL G +++ NP+ +RT+LLPGL A N+ R+ D A+FE Sbjct: 346 DLDVLGISGDDTRHATVKLANPLDDTRPYLRTTLLPGLFHAVTTNMSRSQDDLAVFESGT 405 Query: 575 VYENDTP------------------EGQKYMAAGIRKGSSGIEGS--GRLWSDKS-EERC 613 V+ TP E + A R ++ I GS W +S + Sbjct: 406 VFRAVTPAAAPRPGVDERPSDEVLAEIDAALPAQPRMLAAVICGSWLPDRWDGESVKADW 465 Query: 614 RFVDLFDAK-ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 R L K ADAL V L ++ + +HPGR + + V+G+ GE HP Sbjct: 466 RHAVLVAQKAADALGV--------RLVRKADRQAPWHPGRCAALIVDGK-VIGHAGELHP 516 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 ++ GL C E LD++ + + +V+ +SS K D+A +VD+ + A Sbjct: 517 TVVSKAGLPQRTCAVEFNLDALVAAAP---RGGEVMAISSFPVAKEDVALVVDKSVAAED 573 Query: 733 LVN-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 + +I+ L++ V +FDV++G+ +G +KS+A + ++ T D + D V Sbjct: 574 VRQALIEGAGPLLESVELFDVYEGEQVGYNRKSLAFNLRLRGADRTLTDSEALEARDAAV 633 Query: 792 ENVVKKTNAVLRS 804 + A LRS Sbjct: 634 VRAEETCGAQLRS 646 >gi|149188813|ref|ZP_01867103.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio shilonii AK1] gi|148837233|gb|EDL54180.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio shilonii AK1] Length = 416 Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 139/397 (35%), Positives = 218/397 (54%), Gaps = 12/397 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ + V+ +++ +T GLEV+ V + + + KV+ ++PD D Sbjct: 1 MKFSESWLREWVSPSVTTDELTHQITMAGLEVDDVLPVSGSFTGVKVGKVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVDVGAEELLDIVCGAPNCREGLKVAVATVGAVLP-GDFKIKKAKLRGQPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S IMEL DA +G D+L L D +DV LT NR+DC +RG+A ++ Sbjct: 120 CSFTELGIDVESDGIMELAEDAVIGTDFRDFLGLDDVTVDVDLTANRADCFSIRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 G L +++ P + SI ++ + C + VK V P WM Sbjct: 180 -----GVLNRADVTEPAVNAVEASIADVASIEVKAPAACPRYLGRIVKNVNVQAETPLWM 234 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD E Sbjct: 235 QEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLLDGTE 294 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ G+ T Sbjct: 295 AELNADTLVVADHNKTLAIAGIFGGEESGVTSETKDVLLECAFFAPDHIRGRARSYGLHT 354 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 DS RFERGVD ++ L++ +CGG + + Sbjct: 355 DSSMRFERGVDFALQTGAMERATELLVEICGGEVAPV 391 >gi|295698325|ref|YP_003602980.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] gi|291157103|gb|ADD79548.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Riesia pediculicola USDA] Length = 820 Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 218/849 (25%), Positives = 395/849 (46%), Gaps = 77/849 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV-KVLSVER--NPD 57 MKF +W+K+ +D ++ E + + +T IG+EV K+ RE IV K++ + Sbjct: 1 MKFDETWIKEWIDFEIDSESLLEQITRIGIEVNKIFPREKYLENMIVGKIVKISECFENK 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +L +D GK + +++ C + N R+ + I ++ I N +K I S Sbjct: 61 IPSKVLTVDIGK-KLLKIFCNSLNSRLNM-----KVAVSIQKSYSIKNKKKREQI-SEAC 113 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYL-ELSDPIIDVSLTPNRSDCIGVRGIAL 176 +C ++ ++ +I+E+P + +G ++ +L + D S NR D + GI Sbjct: 114 LCRYNQIFFLKENRNIVEIPKNFSIGSKIGKHLIQYYQRTFDSSSVSNRKDFDYIFGIYR 173 Query: 177 DLVAAGLGKLK-EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWM 234 D+ A K+ + N S +K ++ + C +K V + P+WM Sbjct: 174 DIAAINRKKISFQKNKIKKNRKISHSSHVKLNITEPKYCPYIFSRVIKKVDVGIKTPDWM 233 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 +RL + + + + +I NYV L+ GY +D +I +T+RR+ E I L ++ Sbjct: 234 IERLSWNDVVTTNPINNIKNYVKLETGYSIFAYDFEKIRGSITIRRSKKNESIF-LKEKK 292 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 DL + +VI+ + I SI GI + NT+++L+ A++D NL + Sbjct: 293 IDLLQNTLVISDEKSIISIIGITDNERFKIQKNTSNILLICAIFDF--------NLFSNS 344 Query: 355 DSRYRFERGV----------DLQGMIPVLKHIVSLILSLCGGTA--------SDICIARN 396 + Y++ G+ D ++ ++ LI +CGG D C+ Sbjct: 345 LNEYQYVYGLSSKVNESQEKDSNMLLNTIERTSELITKICGGEVGKIIKFIYEDQCLK-- 402 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE--YDKFEVSVPSWRQDVE 454 + RKIV ++ + G + + IL LGF ++ + YD+ E+ +PSWR+DV Sbjct: 403 ---ESRKIVLKLKKIHQTIGHRLSYKKISEILIHLGFKILSDSNYDQLEIKIPSWRKDVS 459 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDK-----RNLSLQQSRTRYVKRVLASRAMME 509 + D+++EI+RIYG + E Q+ K R+LS+ +KR LA E Sbjct: 460 IEEDIIDEIIRIYGYNNFPKESSRNLQINSKVINNQRDLSMMDI-LYLLKRSLACLGYHE 518 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 ++ +SFI+++ L Q +E+ +PIS+ MS MRTSL+PG+L A N R I Sbjct: 519 IITYSFINEKLQNLLFFNQNYIELPHPISSKMSVMRTSLIPGILSAVQYNQRRQNDQIKI 578 Query: 570 FEVSHVY---ENDTPEG-QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 FE + + +N + + Q + + ++ ++ R W ++ R +D FD K D Sbjct: 579 FESGYTFFLKKNSSADSHQTKVTQKLMLSAAIVDQKERSWFQEN----RKIDFFDIKGDL 634 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGL 680 S++ S D F + Y+P + SAEI L G G H I + + Sbjct: 635 ESILCSIKS-DRKHF-LFKKNLYYPIFDK--EQSAEIYLDDKFFGIIGVIHKRIKEQLEI 690 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 I FE+ ++++ ++ K KK +S +RD++ I + IP +++ + V Sbjct: 691 RKKIFVFEIIIENLLLN-KDLFSIKKYKEISKFPMNQRDISMIFREEIPVSEILSECRRV 749 Query: 741 DRLI------DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 + +FD++QGKS+ G +S++I IQ + T R+ +I +++ + + Sbjct: 750 SSFLLKKKIEVSSKIFDIYQGKSIKNGYRSISINFTIQNSQKTMREHEISNVVEIFINEM 809 Query: 795 VKKTNAVLR 803 KK A+LR Sbjct: 810 KKKFFAILR 818 >gi|313836591|gb|EFS74305.1| phenylalanyl-tRNA synthetase, beta subunit [Propionibacterium acnes HL037PA2] Length = 646 Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 186/671 (27%), Positives = 309/671 (46%), Gaps = 60/671 (8%) Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + +RGIA ++ A ++ P+ P+ + DD C F V + + Sbjct: 1 MSMRGIAREVAHAMSVHFRDPYDEDPIGPVHGPVAVDVHSDD---CSQFIAVPVSDLAPD 57 Query: 229 V-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 P ++ R+ G+R I+ VD+TNYV L+ G P H +DA ++S L VR A GE + Sbjct: 58 APTPRFIADRITRAGMRPINLTVDVTNYVMLESGQPLHAYDADKVSGTLVVRNAHDGEHL 117 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD+ + L PD++VIA D ++AG++GG +T +++E A +DP+ +AR+ Sbjct: 118 VTLDDTDRTLDPDDLVIADDSGAIALAGVMGGAATEMTAESTSIILEGAHFDPMTVARAY 177 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVS-----LILSLCGGTASDICIARNITYKPR 402 + + +++ RFERGVD PV H + L+ G T + + + PR Sbjct: 178 RRHRLGSEASRRFERGVD-----PVCAHTAAVRAAELLAQYGGATIGEPTVVGEVPEMPR 232 Query: 403 KIVFMNSEV-KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 + + N+++ R+ G V E+ + IL R G V D + PSWR D+ + D VE Sbjct: 233 QTI--NADLPSRILGTKVSTEEVIEILTRSGVKVTALGDSLNLVAPSWRPDLVDAYDYVE 290 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQ 520 EI R G D+I EP+ L L+ Q R V R + +E++ FI K+ Sbjct: 291 EIGRKIGFDRI--EPV-LPPSLGASGLTKGQRGRRRVLRSIVEAGFVELITLPFIGDKDL 347 Query: 521 SVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 VL G +++ NP+ +RT+LLPGL A N+ R+ D A+FE V+ Sbjct: 348 DVLGISGDDTRHATVKLANPLDYTHPYLRTTLLPGLFHAVTTNMSRSQEDLAVFESGTVF 407 Query: 577 ENDTPEGQKYMAAGIRKG-------SSGIEGSGRL-------------WSDKS-EERCRF 615 +P R + + RL W ++S + R Sbjct: 408 RAVSPAAAPRPGVNERPADDVLAEIHAALPAQPRLLAAVICGNWLPDRWDEQSVKADWRH 467 Query: 616 VDLFDAKA-DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 L KA DAL V +L ++ + +HPGR + + V+G+ GE HP + Sbjct: 468 AVLVAQKAVDALGV--------TLVRKADRQAPWHPGRCAALTVDGK-VIGHAGELHPTV 518 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + GL C E+ LD++ + +V +SS K D+A +VD+ + A + Sbjct: 519 VSKAGLPQRTCAVELDLDALVAAAP---HGGQVTAISSFPVAKEDVALVVDESVAAEDVR 575 Query: 735 N-IIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 +I+ L++ V +FDV++G+ +G +KS+A + ++ T D + + V Sbjct: 576 EALIEGAGSLLESVELFDVYEGEQVGNKRKSLAFNLRLRAADRTLTDAEAGEARNAAVAR 635 Query: 794 VVKKTNAVLRS 804 + A LRS Sbjct: 636 AEEAYGAQLRS 646 >gi|323254421|gb|EGA38238.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] Length = 361 Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 131/364 (35%), Positives = 216/364 (59%), Gaps = 6/364 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVAATISDTLPITVEAADA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + D +VIA + IAGI GG+H+G + T +VL+E A ++P++I + G+ TD+ Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNVLLECAYFNPLSITGRARRHGLHTDAS 357 Query: 358 YRFE 361 +R+E Sbjct: 358 HRYE 361 >gi|330861375|emb|CBX71609.1| phenylalanyl-tRNA synthetase beta chain [Yersinia enterocolitica W22703] Length = 499 Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 162/518 (31%), Positives = 261/518 (50%), Gaps = 31/518 (5%) Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +S D +VIA + ++AGI GG+H+G ++ T +VL+E A ++P++I + G+ TD+ Sbjct: 1 MSADTLVIADQQKPLAMAGIFGGEHSGVNEETRNVLLESAFFNPLSITGRARRYGLHTDA 60 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKR 413 +R+ERGVD + ++ L++ +CGG A D+ A N+ K I ++ R Sbjct: 61 SHRYERGVDPELQYKAIERATRLLIDICGGEAGPVIDVTSAENLP-KRATITLHREKLDR 119 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G VP E IL RLG V + ++ PSWR D+E + DLVEE+ RIYG D I Sbjct: 120 LIGYPVPAEQVSDILRRLGCQVTEQGSDWQAVAPSWRFDMEIEEDLVEEVARIYGYDNIP 179 Query: 474 SEPLPLTQVEDKR---NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + P+ V K NLSL++ VK L R E + +SF+ + L Q Sbjct: 180 NVPIKANLVMTKHREANLSLKR-----VKTALVDRGYQESITYSFVDPKVQALLHPQQDA 234 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKY 586 L + +PIS +MS MR SLL GLL A N +R + +FE + V +N G Q Sbjct: 235 LILPSPISIEMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNKADLGVRQDV 294 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 M A + +G + + + + +D +D K D +++E L ++F + A Sbjct: 295 MLAAVI--------TGHRYDEHWDLARQPIDFYDLKGDLEAILELTGKLSDVQFRAEAHP 346 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 HPG+S I S E + G+ G HP + L+ FEV + + + Sbjct: 347 ALHPGQSAAIYLSGEHI-GFIGVVHPELERKLSLNGRTVVFEVQWNKL-----ADRAVPQ 400 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSV 765 +S +RD+A +V +++PA ++ K V + V +FDV++GK + EG KS+ Sbjct: 401 ASEISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYRGKGVAEGYKSL 460 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 AI +++Q T +++I + R VE + ++ A LR Sbjct: 461 AISLVLQDTARTLEEEEIAATVARCVEALKQRFQASLR 498 >gi|256372438|ref|YP_003110262.1| phenylalanyl-tRNA synthetase, beta subunit [Acidimicrobium ferrooxidans DSM 10331] gi|256009022|gb|ACU54589.1| phenylalanyl-tRNA synthetase, beta subunit [Acidimicrobium ferrooxidans DSM 10331] Length = 791 Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 215/751 (28%), Positives = 354/751 (47%), Gaps = 52/751 (6%) Query: 17 SLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 + + TL S+GL VE V+ A KVL++ R D ++ +D G + Sbjct: 29 GVRALVGTLDSLGLVVEGVEEHPVAADGVVTAKVLAIHRIEGADRIRLVEVDDGSGRIRP 88 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIM 134 VVCGA N G + A PG +P N + R++RG+ S GM+CS E L D++ + Sbjct: 89 VVCGAWNFVEGDVVPLALPGVRLP-NGAEIGARRLRGVTSEGMLCSAPEAGLGSDASGLA 147 Query: 135 ELPIDAPVGGRLSDYLELSDPII-DVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISC 193 L P+G + + L + D ++ D+++ PNR D GVRG+A DL A ++++ Sbjct: 148 ILSPSLPLGVPVREALGVRDEVVLDIAVEPNRPDASGVRGVARDLAARFRAPF--VDVTG 205 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDIT 253 L+ + P + + + ++ VR V + + L G+R IS +VD T Sbjct: 206 VLTRQD-PRAVTVE---EGAVDRLVLASLE-VRGAVLEPRVARWLVLSGMRQISPIVDAT 260 Query: 254 NYVSLDRGYPSHVFDASRISD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDG--RI 310 N V L+ G PSH +D R++ V+ VR A GE+++ LD++E L+ +VI DG R Sbjct: 261 NAVMLETGQPSHAYDRDRLAGGVVGVRSARPGERLVTLDDRERTLAGGELVIV-DGSDRA 319 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 +AGI+GG + T VL+EVA + IAR+ + G+ T++ +RFERGVD Sbjct: 320 VGLAGIMGGAETEVNAETEQVLLEVAAFPRERIARAARATGLRTEASWRFERGVD----- 374 Query: 371 PVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIE--DSLR 426 P + H V ++ G A+ + +A ++ Y PR+I ++G V +E + Sbjct: 375 PAVAHAVCARVAALVGVATPMLVA-DVAYATTPRRIAVRAESAVAIAGDPVVLESFEPDA 433 Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR 486 L RLGF + + D ++V VP+WR DV + AD+VEE LR G D + PL + +R Sbjct: 434 GLSRLGFDLEPDGDGWQVGVPTWRPDVTDVADVVEEALRQVGYDAVAPTPL----IGPRR 489 Query: 487 N-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMR 545 + +L+Q R R + +LA E + + +S G + I NP+ + S +R Sbjct: 490 DGPTLRQQRERALSTLLADEGAFEAWSVTMVSPSVEEQLGSERVAPVIANPLRPEESVLR 549 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 T++ GL+ A V R + FE V+ + + G+ + Sbjct: 550 TTVAAGLVGALDHAVRRRLEPARFFEWGPVFWQEGRVVNERQRLGLIVAHA--------- 600 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW--YHPGRSGIIKTSAEIV 663 D E R++ A+A +E + S++ G P W HP R + +V Sbjct: 601 HDGGVEAGRWLARLVARAG----LE--LGPGSVQLGPGGPGWPRLHPSRQAAVIDDG-LV 653 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 +G FGE P++ G G V LD+ +++ + L + + DL+F Sbjct: 654 VGVFGELAPDVAAALGARRWRYGV-VELDADWLAEPRPLTASST--LGAFAASELDLSFE 710 Query: 724 VDQHIPAGTLVNIIK-NVDRLIDDVTVFDVF 753 V + A +L ++ + ++ DV FD F Sbjct: 711 VPWDLAAASLAARVREEIGPVVRDVAAFDTF 741 >gi|15835374|ref|NP_297133.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia muridarum Nigg] gi|270285550|ref|ZP_06194944.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia muridarum Nigg] gi|270289561|ref|ZP_06195863.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia muridarum Weiss] gi|301336947|ref|ZP_07225149.1| phenylalanyl-tRNA synthetase subunit beta [Chlamydia muridarum MopnTet14] gi|12644586|sp|Q9PJR8|SYFB_CHLMU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|7190786|gb|AAF39564.1| phenylalanyl-tRNA synthetase, beta subunit [Chlamydia muridarum Nigg] Length = 790 Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 209/806 (25%), Positives = 373/806 (46%), Gaps = 60/806 (7%) Query: 8 LKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLDCAILRID 66 L+ + +S+++I IG+E E + ++L+ KVLS +PD + + I Sbjct: 8 LQRFFSSPLSIKEILQACDRIGIEAECSNVFPDSLNTVVTGKVLSTSPHPDAERLSVAIV 67 Query: 67 TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM----IVNVRKIRGIESTGMMCSEK 122 +E Q++CGAPN R G++ A PG+ I N + + KIRG+ES GM C Sbjct: 68 FDGKEERQIICGAPNCRAGIIVPVALPGAKI-RNALGEVTTIKKSKIRGLESLGMCCGAD 126 Query: 123 EL---MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD-- 177 EL L I E P + P+G S L L+ ++ SLTPN C + G+A + Sbjct: 127 ELGFPHLQTGERGIFEFPENTPLGE--SACLLLAGASLECSLTPNLGHCASLLGLAREIS 184 Query: 178 -LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 L L +E + S PL ES + +L+ S + F + G+ +P ++ Sbjct: 185 FLSDTSLTIPEEFSFS-PLPQESHSCDTH-NLEASPV---FYSVKISGLSWKQSPEDLQA 239 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD----VLTVRRACSGEKILALDN 292 L A+G + ++A+VDITNYV L G P H +D+ + TVR S +++ L+ Sbjct: 240 SLIALGQKPLNAIVDITNYVMLSLGQPLHAYDSQAVDQKSLHATTVR---SPQQLTLLNK 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 + Y L +V+A I +AG++G + ++TT++++E A + P + + + + + Sbjct: 297 ETYTLPEGALVVADQHNILGLAGVMGSAASAYSESTTEIILEAAYFLPQAVRKYQRTIQL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSE 410 T++ YRF RG+D QG++P L + +I +L A I + YK P + Sbjct: 357 HTEAAYRFTRGIDPQGVLPALYAAIHMIRALF-PEAQISPIQKIGEYKSDPLSLNIRPKT 415 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +KRL + + + L LGF I E V VP +R D++E+ DLVEEI R Sbjct: 416 LKRLLDLSLSPSEIAEKLSPLGFQTIAEESSVRVEVPLYRHDIQEETDLVEEICRTTPFV 475 Query: 471 QIKSEPLPLTQ--VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 Q + LP KR+LS LA + + S + E + L Sbjct: 476 QKTQKILPTYTPIYALKRSLS----------TFLADSGLQQFFTCSLLDSEIAAL----S 521 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + L P+ +R SLL G+LK+ N++R FE+ +VY + + ++ Sbjct: 522 LQESSLIPVQNSSLKLRDSLLSGMLKSAATNLNRQAPYVYAFEIGNVYSKEHNQYREEEH 581 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI-EPFVSLDSLRFESGAPSW 647 I ++ S W K+ + + K+ ++ VS++ ++ Sbjct: 582 IAILLTRQVMDDS---WHVKTP-----LSFYTIKSWVEKLLCHAGVSIEDFVLQASQHPN 633 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HP R + ++ LG FG HP + + + + E+ L+ + +S KK+T+ V Sbjct: 634 FHPYRQAALYHKKQL-LGVFGTLHPQLCKKSQIKHDVVFAELSLNVL-LSLKKKTEPHYV 691 Query: 708 VHLSSLHP-VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSV 765 + ++P RD+ +D+ +PA + ++ + ++ V + V+QGK + K++ Sbjct: 692 PY--PIYPSSSRDITITIDKDLPADLVRRELLSFESKWLESVHIVSVYQGKDVTSQSKNI 749 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIV 791 +++++ + + T +I +R+ Sbjct: 750 SLRLVFRDHERTLSGQEIEKEYERLT 775 >gi|213619410|ref|ZP_03373236.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 396 Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 140/388 (36%), Positives = 205/388 (52%), Gaps = 15/388 (3%) Query: 214 CKGFAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C + VKG+ N P WM+++L+ G+RSI A+VD+TNYV L+ G P H FD RI Sbjct: 13 CPRYLGRVVKGINVNAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRI 72 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 + VR A GE ++ LD E L+ D +VIA + IAGI GG+H+G + T +VL Sbjct: 73 DGGIVVRMAKEGETVVLLDGSEATLNADTLVIADHHKALGIAGIFGGEHSGVNGETQNVL 132 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A ++P++I + G+ TD+ +R+ERGVD ++ L+L +CGG A I Sbjct: 133 LECAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPII 192 Query: 393 IARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 N P++ I S++ RL G + E IL RLG V D+++ P+WR Sbjct: 193 DVSNEATLPKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWR 252 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 D+E + DLVEE+ R+YG + I EP+ + + +LSL++ VK +L + Sbjct: 253 FDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKR-----VKTMLNDKGY 307 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 EV+ +SF+ + L G L + NPIS +MS MR SL GLL N +R Sbjct: 308 QEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRV 367 Query: 568 AIFEVSHVYENDTPEG----QKYMAAGI 591 IFE + DT Q M AG+ Sbjct: 368 RIFETGLRFVPDTQANLGIRQDLMLAGV 395 >gi|163785352|ref|ZP_02179988.1| phenylalanyl-tRNA synthetase beta subunit [Hydrogenivirga sp. 128-5-R1-1] gi|159879380|gb|EDP73248.1| phenylalanyl-tRNA synthetase beta subunit [Hydrogenivirga sp. 128-5-R1-1] Length = 400 Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 150/412 (36%), Positives = 234/412 (56%), Gaps = 20/412 (4%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPD 57 MK + W+K ++ D +EK+ + L GLE EK N + T VK+LS+E++P+ Sbjct: 1 MKVSYKWVKQFIENFDEDIEKVVEKLNETGLESTYEKFGNY--IPNLTTVKILSIEKHPE 58 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D ++ T +E QV+ A NV+ G + V A G+ I N + K + S GM Sbjct: 59 KDNLLVCKATDAKKEYQVITAAKNVKEGDIVVLAKEGAVI--NGREIKPVKFGSLTSEGM 116 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIAL 176 S +EL + S + L DAP+G S L+L D II+V +TPNR D + VRG+A Sbjct: 117 FLSFEELGIDIPSEGLFILGKDAPIGVDASKLLDLGEDYIIEVEITPNRGDALSVRGLAR 176 Query: 177 DLVAA-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMR 235 ++ A G +++++ + L E +P EI + D + +G ++ V+ V+P ++ Sbjct: 177 EIAAIFGKKRIEKLPVVSILK-ERLP-EINIETDRLNRYRG---IIIEDVKVEVSPLDIQ 231 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 +L G + I+ +VDITN++ L G P H FD ++ + +R+A GEKI+ALD EY Sbjct: 232 LKLIKSGQKPINNIVDITNFILLQEGQPLHAFDLDKLEGKIHIRQAVEGEKIIALDGNEY 291 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 L+ +++VIA D + +IAGIIGG + D+NT ++L+E A +DP ++ ++ K LGI TD Sbjct: 292 TLNENDIVIADDKKAVAIAGIIGGDNTKVDENTKNILLEAANFDPSSVRKTAKRLGISTD 351 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA---SDICIARNITYKPRKI 404 S YRFERGVD++ + + LILS G A D+ I NI YKP+K+ Sbjct: 352 SSYRFERGVDIENLPNAQDKALELILSTAEGKAVGEKDVYI--NI-YKPKKV 400 >gi|297198448|ref|ZP_06915845.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sviceus ATCC 29083] gi|297147092|gb|EDY60172.2| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sviceus ATCC 29083] Length = 471 Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 161/481 (33%), Positives = 255/481 (53%), Gaps = 33/481 (6%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V++ A P + +VL++E Sbjct: 1 MRVPLSWLREYVDLPATETGRDVQAKLVSAGLEVETVEHLGADLKGPLVVGQVLTIEELE 60 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 61 GFKKPIRFCTVDVGQANGTGEPQEI--VCGARNFAVGDKVVVVLPGATLP-GGFSISARK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD S I+ LP + VG + LEL D ++D+++T NR D Sbjct: 118 TYGKTSHGMICSGDELGMGDDGSHGIIVLPPETEVGKDAIELLELVDEVLDIAVTANRGD 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ +++ P ++ P+++ D C F V Sbjct: 178 CLSIRGVAREAAIAYGL-PLRDPALLDVPGP-NAFGYPVQVS----DPFGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D S + + VRRA Sbjct: 232 GLSPEARSPLWLQRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRSLVQGTIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN-----TTDVLVEVAL 337 GE+I LD E L +++VI + +AG++GG + D+ TTDV++E A Sbjct: 292 EGERIKTLDGVERKLHAEDLVITDERGPIGLAGVMGGANTEIADHAEGEGTTDVVIEAAH 351 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 +D ++IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 FDAVSIARTARRHKLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTAEAGVTEVTA 411 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKA 457 P I +++G+ E +R L+ +G V G+ D+ V+VPSWR D++E Sbjct: 412 PSAPHTISVPADHPDKVAGVSYGRETVVRRLQEVGCDVYGQ-DELIVTVPSWRPDLQEIN 470 Query: 458 D 458 D Sbjct: 471 D 471 >gi|27904627|ref|NP_777753.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|29611883|sp|P59505|SYFB_BUCBP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|27904024|gb|AAO26858.1| phenylalanyl-tRNA synthetase beta chain [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 802 Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 223/824 (27%), Positives = 386/824 (46%), Gaps = 49/824 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV----DNREALSPFTIVKVLSVERNP 56 M+F+ WL D L +S + +T G+EVE + N E + +V+ L V N Sbjct: 1 MEFSEKWLLDWLGFSIS-NVFYEQMTKSGIEVEAIAKISKNFERVIVGEVVERLYV--NT 57 Query: 57 DLDCAILRIDTGKHQEI-QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 + LR+ + + I + G A S + N +I +R I S Sbjct: 58 MHNIVFLRVKLSEKKMIFSISSNDIEFSRGTKIAIATQDSKLFNNRLISMLRFKEKI-SE 116 Query: 116 GMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDP-IIDVSLTPNRSDCIGVRGI 174 GM+CS K+L + + I+E+ + PVG +S +L D II VS PNR+D + + GI Sbjct: 117 GMVCSFKDLGILNIKNKIVEICSEVPVGTDISKFLWFDDDRIIKVSSAPNRADGMSILGI 176 Query: 175 ALDLVAAG---LGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR-NNVA 230 A D+ A L LKE +I+ + I ++ D +C F ++ V N Sbjct: 177 ARDMSALNNLCLPTLKEYHINI---TNHEKFRILINIPD--VCLNFIGRTIQSVNLNRQT 231 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P W+ +RL+ + S + LVDI NYV ++ G P F+ I + +R A E+ Sbjct: 232 PLWILERLRRSSISSENVLVDIINYVLIELGQPIFSFNIHGIVQNIIIRTARDNEQFFDS 291 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR-SGKN 349 +Q + ++++ D I + ++ ++ ++ + AL++P I S N Sbjct: 292 CSQRVPIDKRTILLSDDKEILVLGNHTNSYNSRLSLSSHNIFLGCALFNPEYINNDSHFN 351 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN--ITYKPRKIVFM 407 G + RGVD L ++ L+L +CGG AS++ +A + +T +KI + Sbjct: 352 FGFKNKITEYYSRGVDSDIQYKALNYVTYLVLKICGGNASNVVLANSSRVTVIQKKIFVL 411 Query: 408 NSEVKRLSGIDVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 + R ++ I D+L + L +LG+ V + + V PSWR D++ + D++ +++R Sbjct: 412 KKTLHRY--VNNIISDTLVVKYLLQLGYLVEKQKHCWLVIPPSWRFDIQIQEDVISDLVR 469 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI-SKEQSVLF 524 ++G I + L +T + + ++ S R +K +L EV+ +SF+ S+ Q LF Sbjct: 470 VFGYHNIPACAL-VTNYKLVHDDNIYTSLNR-IKLLLVDLGYNEVITYSFVDSQIQKYLF 527 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 +++ +LNPIS MS+MR SL GLL + N +R FE +E D G Sbjct: 528 -PKRKQFFLLNPISRKMSSMRLSLWNGLLSSVLYNQNRQEKVMRFFESGLCFEED---GN 583 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERC--RFVDLFDAKADALSVIEPFVSLDSLRFES 642 +Y+ K + G + ++++ R + V +D K D ++ LD + F+ Sbjct: 584 EYLGV---KQDLYLAGVISGYKNETDWRSFNKIVSFYDLKGDIELIMALLRKLDKVSFKK 640 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRT 702 P +S I E++ G G NI GL FE+ I S R Sbjct: 641 MLFQNLCPKQSAAIYFEREMI-GVIGVISSNISKKMGLKYKTIVFELIWKKIAQSNDYRI 699 Query: 703 KTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLG 759 + SL+P RD++ IV+ I A ++ + KNV D+++ +V +FDVF GK++G Sbjct: 700 RD------VSLYPRCSRDISIIVNDSIAADEILKVSKNVFLDKIV-EVKLFDVFYGKNVG 752 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KKS++++ + K T ++ I ++ + + +K NA+LR Sbjct: 753 LNKKSLSLRFIFGSSKRTLSEEIISNCLNECIRILQEKFNAILR 796 >gi|197294575|ref|YP_001799116.1| Phenylalanyl-tRNA synthetase beta-chain [Candidatus Phytoplasma australiense] gi|171853902|emb|CAM11865.1| Phenylalanyl-tRNA synthetase beta-chain [Candidatus Phytoplasma australiense] Length = 809 Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 214/836 (25%), Positives = 392/836 (46%), Gaps = 76/836 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER-NPDLD 59 MK LK H K+ D + + EVE + + + K+L ++ Sbjct: 1 MKILEPILKKHFSNLPKTNKLFDLINNYINEVETLRPISQNTNLVVGKILEYQKITGSQK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ +D G + +++VCGA N+ + A GS + + +KI G+ S GM+C Sbjct: 61 LNLVTVDIGT-RILKIVCGATNLDNNGKVIVALEGSFLEGFQTTLKNKKIYGVFSEGMLC 119 Query: 120 SEKEL------MLSDDSASI---MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 + +EL + S++ I + + +G L L+ +++ +TPNR+D + Sbjct: 120 ALEELGIDSSILTSEEKTGIYFFQDTQDEIKLGSNALIPLGLAGFFLELGVTPNRADLLS 179 Query: 171 VRGIALDLVAAGLGKLKEINIS-------C-PLSSESIPLE-------------IKFDLD 209 G A DL A LK I+ S C S ++ LE +K +L+ Sbjct: 180 YFGFAKDLAAV----LKSISFSDNTFTDDCGDFSKDNQSLENVENFFATKKTSPLKVNLE 235 Query: 210 DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 S+ C + C ++ + +P W+R L ++ I+ +VD+TN + L+ G P H FD+ Sbjct: 236 -SNACLEYHACILENITIKPSPLWLRNTLLHSDIKPINNVVDVTNLIMLEYGIPLHAFDS 294 Query: 270 SRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 S I ++ VR+A EKI L+ ++L ++VI ++AGIIG +G ++ Sbjct: 295 SNIKEI-KVRQALPQEKITTLNENAFELDSRDLVITDGTTPIALAGIIGLLESGIKNDPK 353 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS 389 ++++E A + P +I+++ + L I T S RFERGV+ + + LK L++ L T + Sbjct: 354 NIILECAYFKPESISQTSQKLKIKTMSSLRFERGVNPELIPLALKKACELLIKLADATIT 413 Query: 390 DICI-ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVP 447 I ++ KP+ I +VK+ +GI + + L LG+ ++ + + +V P Sbjct: 414 YQPINKKSEVIKPKVIDLNLDDVKKKTGITFLLSQTKNWLLNLGYQILNVDGNNLKVIPP 473 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRA 506 R D++ K +++ +++R+YG + L + ++K+ ++L+Q R +K++L + Sbjct: 474 FRRYDIKIKENVIADLVRLYGCKNL----LVNKKNQNKQIKMTLKQKNLRELKKILVNLG 529 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 E V +S IS+E F + ++ILNP+S D +R SLL GL++ R D Sbjct: 530 FYETVTYSLISQEMFECFNYQKEIIQILNPLSQDKVILRQSLLSGLIEVMSYQHKRKNFD 589 Query: 567 FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 A FE+S VY PE +K S G+ SG++ + +++ F K + Sbjct: 590 NAFFEISKVYH---PEKEKL--------SLGLILSGKILTGGWQKQDITSSFFVLKG-VV 637 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 I F+ +D +S + HPG I EI+ G G+ HPN+ + L + Sbjct: 638 EKISSFLGVDLTYQKSSSNLNLHPGIQAGILYQNEII-GKIGKIHPNLNEKHHLKDS--- 693 Query: 687 FEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL- 743 ++ I +S + K K+V+ +S V RDL+F++ + I+ L Sbjct: 694 ---FVCEILLSDQLLNKNYKIVYHPISKFPVVTRDLSFLIASQYAFLDVQKTIQKHSFLD 750 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLI------QPLKDTFRDDDIRILMDRIVEN 793 + D +FDV+Q + KK +++ + L+ D + I++D +++N Sbjct: 751 LIDCQLFDVYQ---IDNDKKELSLAFRLSFSSPFNNLEKEIIDQRMNIIVDNLIQN 803 >gi|256005975|ref|ZP_05430916.1| B3/4 domain protein [Clostridium thermocellum DSM 2360] gi|255990057|gb|EEU00198.1| B3/4 domain protein [Clostridium thermocellum DSM 2360] Length = 411 Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 138/396 (34%), Positives = 220/396 (55%), Gaps = 11/396 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MK + WLKD++D +VS +++ D +T G +VE ++ E ++ + K+LS+E++PD D Sbjct: 1 MKAPIDWLKDYVDINVSTKELADAMTMSGSKVEGIEVQGEEITKVVVGKILSLEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+V GA NV VG A GS +P I + K+RG+ES GMM Sbjct: 61 RLQVAKVDVG-SEVLQIVTGAQNVNVGDYIPVALVGSTLPGGKKI-SKGKLRGVESYGMM 118 Query: 119 CSEKELMLSDDSA------SIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L+ D I LP + +G + + L L+ II+ +T NR DC+ + Sbjct: 119 CSIEELGLTRDDCPDAPEDGIYILPKEEELGKDIKEVLGLNKEIIEFEITSNRPDCLSII 178 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A + K K I+ + I ++ D+ LC FA VK V+ +P Sbjct: 179 GLAREAAVTLKTKFKRPVINVKEEGDDASQYISVEVKDTGLCPRFAARVVKDVKIGPSPK 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALD 291 WMR RLKA G+R I+ +VDITNYV L+ G P H +D I + + VRRA GE I LD Sbjct: 239 WMRDRLKAAGVRPINNIVDITNYVMLEYGQPMHAYDIKDIKGNKIIVRRAFDGEIIKTLD 298 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 +Q+ +L +VIA + R +AG++GG ++ D+T ++ E A ++ ++ + K LG Sbjct: 299 DQDRELDSSMLVIADEERAVGVAGVMGGANSEIKDDTKTIVFEAANFNGTSVRLTAKKLG 358 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 + T++ RFE+G+D + + + L+ L GT Sbjct: 359 MRTEASGRFEKGLDPENVEAAINRAAQLVEELGIGT 394 >gi|297470466|ref|XP_002683968.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain, putative-like, partial [Bos taurus] gi|296491787|gb|DAA33820.1| phenylalanyl-tRNA synthetase beta chain, putative-like [Bos taurus] Length = 396 Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 137/409 (33%), Positives = 224/409 (54%), Gaps = 26/409 (6%) Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 M+CS+ EL + + + +MELP DAPVG + YLEL D I+V LTPNR DC+ + G+A Sbjct: 1 MLCSQAELQVGEGNDGLMELPADAPVGQDIRAYLELEDASIEVDLTPNRGDCLSLAGLAR 60 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL---EIK-FDLDDSSLCKGFAMCCVKGVR-NNVAP 231 ++ G L ++ P+ + ++P E++ ++ + C + ++ V + P Sbjct: 61 EV-----GALYNAPVTRPVVA-AVPAVHDEVRSIEVLAPNACPRYLGRVIRNVDLSKPTP 114 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ LD Sbjct: 115 LWMVERLRRADVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLLD 174 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 QE L D +VIA R +IAG++GG+H+G T DV +E A +D I IA ++ G Sbjct: 175 GQEVSLRADTLVIADHARALAIAGVMGGEHSGVSATTRDVFLESAFFDQIAIAGKARSYG 234 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNS 409 + TD+ +R+ERGVD + ++ L+L + GG A I + Y P I Sbjct: 235 LHTDASHRYERGVDWKLAREAMERATGLLLEITGGEAGPITETVSEQYLPSIAPITLRAK 294 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 V+++ G+ + + ++L LG + G +++V+VPS R D+ + DL+EE+ R+YG Sbjct: 295 SVEQMLGLVIEPAEIEQLLSALGLGISAGGEGQWQVAVPSHRFDISLEVDLIEELARLYG 354 Query: 469 VDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +++ ++ P + E + +L ++R+L +R E V Sbjct: 355 YNRLPVRYPQARLAPQPKAEARAHLP-------ELRRLLVARGYQEAVT 396 >gi|145641674|ref|ZP_01797251.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|145273721|gb|EDK13590.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.4-21] Length = 483 Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 157/500 (31%), Positives = 254/500 (50%), Gaps = 27/500 (5%) Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 +AGI GG +G ++ T DV++E A + P+ IA + G+ TD+ +RFERGVD + Sbjct: 1 MAGIFGGAASGVNNETKDVILESAFFAPLAIAGRARQYGLHTDASHRFERGVDFELARKA 60 Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLSGIDVPIEDSLRILER 430 ++ +L+L +CGG A +IC A + T+ P+ + S++ L G + E I R Sbjct: 61 MERATALLLEICGGEAGEICEASSETHLPKVNTVQLRRSKLDALLGHHIETEIVTEIFHR 120 Query: 431 LGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLS 489 LGF V D + V+ SWR D+E + DL+EE+ RIYG + I + PL ++ + + Sbjct: 121 LGFDVTYANDIWTVTSASWRFDIEIEEDLIEEVARIYGYNSIPNNAPLAHLRMREHKESD 180 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLL 549 L +R +K L E + +SF+ + L Q L + NPIS +MS MR SL+ Sbjct: 181 LDLAR---IKTALVDADYQEAITYSFVDPKIQSLLHPQQEALVLPNPISVEMSAMRVSLM 237 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAGIRKGSSGIEGSGRLW 605 GLL A N +R + +FE + D Q+++ + + G++ E W Sbjct: 238 SGLLGAVLYNQNRQQSRVRLFETGLRFVPDANAEFGVRQEFVLSAVITGTAKSEH----W 293 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 + K+E VD FD K D SV+ + +RF HPG+S I+ + + G Sbjct: 294 AGKAES----VDFFDLKGDLESVLSLTEGGNRVRFVEKQFDALHPGQSAAIELDGQEI-G 348 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + G HP+I GL+ FE+ ++I + K +S +RDLA +V Sbjct: 349 FIGAIHPSISQKLGLNGKTFVFEILWNAIAARNVVQAK-----EISKFPANRRDLALVVA 403 Query: 726 QHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 +PAG L+ K ++L+ V +FDV+QG + EG KS+AI + +Q + T D++I Sbjct: 404 DSVPAGELIAACKQAGGEKLV-QVNLFDVYQGVGVAEGYKSLAISLTVQDNEKTLEDEEI 462 Query: 784 RILMDRIVENVVKKTNAVLR 803 ++ ++ V ++ NA LR Sbjct: 463 NAVISAVLAEVKQRFNAELR 482 >gi|34558833|gb|AAQ75177.1| phenylalanyl-tRNA synthetase beta subunit [Alvinella pompejana epibiont 7G3] Length = 777 Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 225/841 (26%), Positives = 396/841 (47%), Gaps = 102/841 (12%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL + +D +S +++ +T +IGLEV++ E + +V+S ++P+ D Sbjct: 1 MIVTRTWLNNFIDLRGISDKRLYETFNNIGLEVDRFKKYEIPDGVVVGEVISCRKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G+ + +Q+VCGA NV A G+ + +N I V K+RG++S GM+ Sbjct: 61 KLNLCEVNVGE-EILQIVCGASNVVDAKYVAVAKVGAKLDDNFEIKPV-KLRGVDSFGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAP---VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L + IM L +G L+ Y +++D I ++ LT NR DC+ + G+A Sbjct: 119 CSSTELGLPKINDGIMILDDSIGRLIIGKELNSYPKIADTIFELELTANRGDCLSIYGVA 178 Query: 176 LDLVAA------------------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGF 217 DL AA GL ++ E+ S + + ++F+ +SL Sbjct: 179 RDLSAALDIPLNNLDYEGSDKIKIGLARIAELRASGHVKASLKYTLVEFENIYTSLVVSL 238 Query: 218 AMCCV-KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 + + K + +N++ N + + VG+ I D+TN V + D ++S V Sbjct: 239 RLGFIDKKLESNLS-NLINYTIHTVGV--IIRAYDVTNLV---------ITDEKKLSIVA 286 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVV-IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 + R DN+ + + R SI G+ K +D T VL+E Sbjct: 287 STR--------------------DNLTRVRVNKREFSIVGVSQSKDTKVNDLTKKVLLEA 326 Query: 336 ALWDP-INIARSGKNLGIITDS-RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 + +P I + KN G+ TD Y RG + + LK+I L+ D + Sbjct: 327 SYVNPDILVDAVAKN-GLETDELYYHTSRGSEPNFTLG-LKYITYLLEEYNECNFFDGYL 384 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWRQD 452 + +P+ I ++E+ + G + + L IL LGF V D F V+VP +R D Sbjct: 385 SIEDESEPKIITINDNEISHIIGKKIEKGEILNILTALGFRVHSSAEDAFGVTVPKFRHD 444 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM----M 508 +E D+ EEI+RI G++ I+ P+ + +D+ N + ++K+ L RA+ Sbjct: 445 IENIYDVTEEIVRIIGINNIEDRPMKFFE-KDRLN---SITNKFFIKKNLKQRAISASFF 500 Query: 509 EVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 E V+++F K+ Q F + EL+I+NPI+ D++ +RT+LL LL A RN++ + Sbjct: 501 ETVSYAFCDKKLLQKYGFKSVKDELDIINPITEDLNTLRTTLLINLLSAVRRNINYSKKS 560 Query: 567 FAIFEVSHVYENDTPEGQKY--MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 A+FE+ V++ + E + + + +G R+ S I L D F + Sbjct: 561 IALFEIGTVFDENREEKELFSLVFSGQREKESVINSGKPLDID-----------FKTFIE 609 Query: 625 AL-SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 L S+I F LR HP +S I + +I GY + HP + F L Sbjct: 610 KLSSIIGDF----ELRVSHQKNGLIHPYQSADIIQNGDIC-GYISKLHPKAREDFELPET 664 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-R 742 E+ D + K K KK+ S V +D++ +VD+++P + +I+++ Sbjct: 665 FIA-ELEFDKL---MPKHVKAKKI---SKFQGVYKDISLVVDKNLPYNQIATLIESLKIP 717 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 ++ DV++ SL + KKS+ I++ +Q L++T D +I +D I++ + ++ A L Sbjct: 718 ILKRYYPIDVYEDASLKD-KKSLTIRLFLQSLENTLEDREIESAIDIIIKELKEQYGASL 776 Query: 803 R 803 R Sbjct: 777 R 777 >gi|116330010|ref|YP_799728.1| phenylalanine--tRNA ligase beta subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|122282219|sp|Q04VV0|SYFB_LEPBJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|116123699|gb|ABJ74970.1| Phenylalanine--tRNA ligase beta subunit [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 802 Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 230/849 (27%), Positives = 399/849 (46%), Gaps = 93/849 (10%) Query: 1 MKFTLSWLKD-----HLDTDVSLEKICDTLTSI-GLEVEKVDNREALSPFTIVKVLSVER 54 MK +L W+ D + DV L+KI ++ I G+ V R L IV++ S+++ Sbjct: 1 MKLSLDWMNDFTPLKEVGLDVILKKIAVSVCEIDGV----VPFRPELDFVKIVRIESLDK 56 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P D I + G + Q+V GA NV+VG L A PG+ + + ++ + ++RG++ Sbjct: 57 HPSADKLQIAEVFDGSSKS-QIVTGATNVKVGDLVPLAIPGAKLGDREILES--ELRGVK 113 Query: 114 STGMMCSEKELMLSDDSASIMELP--IDAPVGGRLSDYLELSDPIIDV---SLTPNRSDC 168 S+GM CSEKEL LS++S+ + L A +G + +L D I ++ S+T +R D Sbjct: 114 SSGMFCSEKELSLSEESSGVWILNGIEGAEIGKTIRSFLYYEDIIFEIDNKSIT-HRPDL 172 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD----------------DSS 212 G A +L + + P++ FDL SS Sbjct: 173 WSHFGFARELAS---------QLRLPITFNPFESLWNFDLSMKFPRVLENQNAHSYYASS 223 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 +C+ F + + + RL+ G+R I+ +VD++NYV L+ G P+H FD + Sbjct: 224 ICEVFVIPSKRK---------FQSRLQKCGIRVINNVVDVSNYVMLEMGQPTHFFDKRFL 274 Query: 273 SD----VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 L V A GE LD L + ++I + GR ++AG++GGK + +NT Sbjct: 275 ESQGGVSLEVSYAKKGESFALLDETSPSLEEEILLIRNQGRPVAVAGVMGGKESAVQNNT 334 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T++++E A++ I +S ++ GI +DS R+E+G++ +PV++ ++L L G + Sbjct: 335 TEIVMESAVFAREKIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNL-LKENGCPS 393 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 + P K V +++++ ++ GI + D ILERL F V + D+ E Sbjct: 394 LKASEPVGFLHTPHKEVRIHTDIHFINTKLGITLSQGDITDILERLHFMVSWKGDRLEAL 453 Query: 446 VPSWRQ--DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVL 502 VP +R DV DLVEEI R G D I+ PL L +++ RNLS + R K Sbjct: 454 VPKFRHNYDVTIPEDLVEEIGRTRGYDTIQVTPL-LAEIKTPIRNLSRELERK--CKTFF 510 Query: 503 A-SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + EV N+SF + +++ L G + ++I N + + S +R SL+ LLK N D Sbjct: 511 SVGLGYHEVYNYSFQALKENELDGDVELSVKIRNEMPEEQSVLRNSLISSLLKNIRTNQD 570 Query: 562 RAIADFAIFEVSHVYENDTPE---GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 R ++ IFE Y N PE +K+ + + E L D D Sbjct: 571 R-FSEIKIFEFGRAYFN-IPEPDNEKKFFSFAVSFDRKSSESDLGLLED---------DF 619 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS-GIIKTSAEIVLGYFGEFHPNILDF 677 + + S ++ ++ + ++ ++HPG S +I S +I G G HP +LD Sbjct: 620 LKVRKEIESFLK-YIRIFEYFWDIKPEIFFHPGASLSLIVDSKQI--GNLGYVHPAVLDS 676 Query: 678 FGLSNP-ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 F L I G + + I R ++ V S + D++ ++ + ++ Sbjct: 677 FELKKRVIYGSLEFEKLVEIWNTNRNISRFNVP-SQFPEAEIDISILIGEKENTNLFTDL 735 Query: 737 IKNVDRL--IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 ++ +++ + + V+ F G S+ GK+SV+ + + + TF + I+ + D +V + Sbjct: 736 VRR-EKIPELQEGWVYSQFAGGSVPVGKRSVSYRFRLVNYEKTFTQERIKEISDHLVA-L 793 Query: 795 VKKTNAVLR 803 K VLR Sbjct: 794 AGKNGFVLR 802 >gi|93140707|sp|Q6YPX7|SYFB_ONYPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 822 Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 203/789 (25%), Positives = 352/789 (44%), Gaps = 82/789 (10%) Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 ++ ++TG + +++VCGA N++ G + A GS + N + +KI G+ S GM+C+ Sbjct: 69 LVEVNTGT-KVVKIVCGASNLQNGKKVIVASEGSFLEGINATLKNKKIYGVFSEGMLCAL 127 Query: 122 KELMLSDDSASIMELP----IDAP-----VGGRLSDYLELSDPIIDVSLTPNR-SDCIGV 171 +EL +S + E D P +G L L I+++ LTPNR D + Sbjct: 128 EELGISTKFLTPQEQEGIYLFDDPNDQIALGSNALIPLGLDCFILELGLTPNRVGDLLSH 187 Query: 172 RGIALDLVAA-------GLGKLKEINISCPLSSESI-----------PLEIKFDLDDSSL 213 G A DL A + K N S + PL+++ + D Sbjct: 188 LGFAKDLKAVLSSQSSNNNQETKSTNYKTKNSEDQTNPDFFANLPQSPLKVQIENDS--- 244 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C + C ++ ++ +P W+R L G+ I+ +VDITN + ++ G P H FD+ I Sbjct: 245 CYEYNACILENIKIKPSPLWLRNALLQSGINPINNVVDITNLILIEYGIPLHAFDSENIK 304 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + VR+A E I L+ ++ L +++VI + ++AGI+G + TT +++ Sbjct: 305 QI-KVRKALPQENITTLNQNDFVLDENDLVITDGKKAIALAGIVGLLESSIKPTTTKIIL 363 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSLCGG------ 386 E A + P IA++ + L T+S RFERG+D Q +IP+ + L+++L G Sbjct: 364 EAAYFSPQTIAQTCQKLKTKTESSLRFERGID-QSLIPLAFQKACQLLVTLADGKITYQP 422 Query: 387 ------TASDICIARNITYKPRKI--VFMNSEVKR-LSGIDVPIEDSLRILERLGFSVIG 437 ++ I+ N+ + RKI +++K L +D I S + LG Sbjct: 423 VITKQKNRTNPTISLNLDFVTRKIGVSLCPTQIKNWLLNLDYQIHTS----KHLGPQ--N 476 Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 + ++ + P R DV+ K D++ ++ R+YG ++ P Q+ + L+L+Q R Sbjct: 477 KNEQLNLQAPLRRYDVKIKEDVISDLTRLYGCHKL---PPQTIQIPTQGKLTLKQKNIRE 533 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 ++++L + E + +S IS E F + ++I+NP+S D +R SLL L++ Sbjct: 534 LRKLLVNLGFYETITYSLISSEMFEAFTPQKPFIKIMNPLSQDKMILRQSLLSSLVEVLS 593 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 R D A FE+ Y P + A G LW + FV Sbjct: 594 YQHKRQTFDTAFFEIGKTY---FPNQETLSLAFALNG----HFLNSLWHKQDVSSSFFVT 646 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 L I F+ + ++ S +HPG + + +I+ G G+ HP + Sbjct: 647 -----KGILEKISAFLGITLTYQKTQQHSNFHPGMQANLLFNNQII-GVIGKTHPQLNTK 700 Query: 678 FGLSNP-ICGFEVYL-DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 + L +C E++L D I TKT + V RDLAF+VD + Sbjct: 701 YHLKESFLC--ELFLTDEI----LNTTKTFTFQPIPKFPTVIRDLAFLVDTKYSFYQIEQ 754 Query: 736 IIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 IK + +FDV+Q E K S+A+++ L D+ M++I N+ Sbjct: 755 TIKQTTPFDLIKCELFDVYQIPKTKE-KHSLALRLFFHNLDKNLEKQDVEHCMEKITSNL 813 Query: 795 VKKTNAVLR 803 +K + +R Sbjct: 814 IKHFHIEIR 822 >gi|116329389|ref|YP_799109.1| phenylalanine--tRNA ligase beta subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|122282831|sp|Q04XL9|SYFB_LEPBL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|116122133|gb|ABJ80176.1| Phenylalanine--tRNA ligase beta subunit [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 802 Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 230/849 (27%), Positives = 399/849 (46%), Gaps = 93/849 (10%) Query: 1 MKFTLSWLKD-----HLDTDVSLEKICDTLTSI-GLEVEKVDNREALSPFTIVKVLSVER 54 MK +L W+ D + DV L+KI ++ I G+ V R L IV++ S+++ Sbjct: 1 MKLSLDWMNDFTPLKEVGLDVILKKIAVSVCEIDGV----VPFRPELDFVKIVRIESLDK 56 Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +P D I + G + Q+V GA NV+VG L A PG+ + + ++ + ++RG++ Sbjct: 57 HPSADKLQIAEVFDGSSKS-QIVTGATNVKVGDLVPLAIPGAKLGDREILES--ELRGVK 113 Query: 114 STGMMCSEKELMLSDDSASIMELP--IDAPVGGRLSDYLELSDPIIDV---SLTPNRSDC 168 S+GM CSEKEL LS++S+ + L A +G + +L D I ++ S+T +R D Sbjct: 114 SSGMFCSEKELSLSEESSGVWILNGIEGAEIGKTIRSFLYYEDIIFEIDNKSIT-HRPDL 172 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD----------------DSS 212 G A +L + + P++ FDL SS Sbjct: 173 WSHFGFARELAS---------QLRLPITFNPFESLWNFDLSMKLPRVLENQNAHSYYASS 223 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 +C+ F + + + RL+ G+R I+ +VD++NYV L+ G P+H FD + Sbjct: 224 ICEVFVIPSKRK---------FQSRLQKCGIRVINNVVDVSNYVMLEMGQPTHFFDKRFL 274 Query: 273 SD----VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNT 328 L V A GE LD L + ++I + GR ++AG++GGK + +NT Sbjct: 275 ESQGGVSLEVSYAKKGESFALLDETSPSLEEEILLIRNQGRPVAVAGVMGGKESAVQNNT 334 Query: 329 TDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 T++++E A++ I +S ++ GI +DS R+E+G++ +PV++ ++L L G + Sbjct: 335 TEIVMESAVFAREKIRKSIRSTGIRSDSSVRYEKGLEATTTLPVIRRALNL-LKENGCPS 393 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDKFEVS 445 + P K V +++++ ++ GI + D ILERL F V + D+ E Sbjct: 394 LKASEPVGFLHTPHKEVRIHTDIHFINTKLGITLSQGDITDILERLHFMVSWKGDRLEAL 453 Query: 446 VPSWRQ--DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVL 502 VP +R DV DLVEEI R G D I+ PL L +++ RNLS + R K Sbjct: 454 VPKFRHNYDVTIPEDLVEEIGRTRGYDTIQVTPL-LAEIKTPIRNLSRELERK--CKTFF 510 Query: 503 A-SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + EV N+SF + +++ L G + ++I N + + S +R SL+ LLK N D Sbjct: 511 SVGLGYHEVYNYSFQALKENELDGDVELSVKIRNEMPEEQSVLRNSLISSLLKNIRTNQD 570 Query: 562 RAIADFAIFEVSHVYENDTPE---GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 R ++ IFE Y N PE +K+ + + E L D D Sbjct: 571 R-FSEIKIFEFGRAYFN-IPEPDNEKKFFSFAVSFDRKSSESDLGLLED---------DF 619 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS-GIIKTSAEIVLGYFGEFHPNILDF 677 + + S ++ ++ + ++ ++HPG S +I S +I G G HP +LD Sbjct: 620 LKVRKEIESFLK-YIRIFEYFWDIKPEIFFHPGASLSLIVDSKQI--GNLGYVHPAVLDS 676 Query: 678 FGLSNP-ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 F L I G + + I R ++ V S + D++ ++ + ++ Sbjct: 677 FELKKRVIYGSLEFEKLVEIWNTNRNISRFNVP-SQFPEAEIDISILIGEKENTNLFTDL 735 Query: 737 IKNVDRL--IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 ++ +++ + + V+ F G S+ GK+SV+ + + + TF + I+ + D +V + Sbjct: 736 VRR-EKIPELQEGWVYSQFAGGSVPVGKRSVSYRFRLVNYEKTFTQERIKEISDHLVA-L 793 Query: 795 VKKTNAVLR 803 K VLR Sbjct: 794 AGKNGFVLR 802 >gi|152992143|ref|YP_001357864.1| phenylalanyl-tRNA synthetase subunit beta [Sulfurovum sp. NBC37-1] gi|151424004|dbj|BAF71507.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurovum sp. NBC37-1] Length = 777 Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 213/833 (25%), Positives = 394/833 (47%), Gaps = 86/833 (10%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL + +D ++VS + + +T +IGLEV+ +D E + K++S E++PD D Sbjct: 1 MIVTRSWLNEFIDLSEVSNDTLYETFNAIGLEVDSIDQVEIDPKVVVGKIISCEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G E Q+VCGA NV A G+ +P N I + ++RG++S GM+ Sbjct: 61 KLNVCQIDVGGRVE-QIVCGAANVLDAEYVAVATIGAVLPGNFEIKDA-ELRGVKSAGMV 118 Query: 119 CSEKELMLSDDSASIM---ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 C+ EL L + IM E + VG L +Y ++D II++ LT NR DC+ + G+A Sbjct: 119 CASSELGLPEMGKGIMILDESIGELEVGKALGEYPTVADTIIELELTANRGDCLSIYGVA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD-------DSSLCKGFAMCCVKGVRNN 228 DL AA ++K +E + L I D + D+ L + + ++ + + Sbjct: 179 RDLSAALNIEMKSFEYK---QAERMKLGIARDAELHTEGEIDADL--RYKLASIEYIDDT 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI---SDVLTVRRACSGE 285 +R RL V + + L I Y + G +D + D + V + Sbjct: 234 F---LIRLRLAMVNVEAEGKLDRILAYATHTTGVILRAYDCVPLCNEDDKIMVSPRAKAK 290 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 I+ + E ++ SI G+ + DNTT +L+E + DP + Sbjct: 291 GIIEIFAHE--------------KVLSIVGVNQVEDYKATDNTTKLLIEASYIDPDLLVE 336 Query: 346 SGKNLGIITDS-RYRFERGV--DLQGMIPVLKHIVSLILSL-CGGTASDICIARNITYKP 401 + + TD Y+ RG DL + L +++ + C + D+ + R+ Sbjct: 337 AVAEHQLKTDELYYKTSRGSNPDLGLGLQFLAYLMDNYSDINCYEGSLDVRVERH----N 392 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLV 460 +KI+ + EV + G+DV + + IL++LGF + + +++ V+VP +R D+ D+ Sbjct: 393 KKIIVDSGEVSSIIGMDVEMNKIVTILKKLGFEITMMDHEHVAVAVPLFRHDIRNIQDIT 452 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME--VVNWSFISK 518 EEI+RI G++ I+++P + KR L+ R + K+ + +RA+ N S++ Sbjct: 453 EEIVRIIGINNIEAKPFVFAE---KRRLNATSDRFK-AKKSIKNRAVGNGFYENVSYVFT 508 Query: 519 EQSVL----FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 E++VL F + L++ NPI+ +++ +R+++L LL A RNV +FE+ Sbjct: 509 ERAVLEKYGFETVETALDLANPIAEELNTLRSTILTNLLNAVKRNVSYTKKSIPLFEIGA 568 Query: 575 VYENDTPEGQ--KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 V+ + E + ++ +G +G + + +G + + VD +V+ F Sbjct: 569 VFGSQREESEVLSFVFSGQIEGEN-VSNAG---------KPKMVDFASFTQKIGAVVGDF 618 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF-EVYL 691 + R + HP +S I + + V GY + HP + + +G+ P+ E+ L Sbjct: 619 DLVPCTR----NNALLHPYQSADIIVNGK-VCGYMSKLHPMVQEEYGI--PVTFIAELSL 671 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 D++ T +S V +DL+ ++D+ + + ++ +D + + Sbjct: 672 DALLPEHISATP------ISKFQGVYKDLSIVIDKSLSYYEVAKVLNGLDIPTLKESYPV 725 Query: 751 DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++ + LG KKS+ I+ IQ ++ T D DI +M +++ + NA LR Sbjct: 726 DIYEDEKLG-NKKSLTIRFFIQSMEKTLEDSDIEAVMAEVMQALETNCNAELR 777 >gi|87306630|ref|ZP_01088777.1| phenylalanyl-tRNA synthetase beta chain [Blastopirellula marina DSM 3645] gi|87290809|gb|EAQ82696.1| phenylalanyl-tRNA synthetase beta chain [Blastopirellula marina DSM 3645] Length = 671 Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 189/665 (28%), Positives = 321/665 (48%), Gaps = 52/665 (7%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL------KEINISCPLSSESIPLEIKFD 207 D +D+ +T NR D +G GIA + A+ L L ++ + P S+ + + I Sbjct: 41 DRQLDLEVTSNRPDWLGHIGIARE--ASVLFDLDLQIPPAQVTATGPAISDYLSVTIA-- 96 Query: 208 LDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 D S C + +KGV +P W+ +RL +G+ I+ +VDITNYV ++ G P H F Sbjct: 97 --DESFCPRYIARTIKGVTVGPSPQWLARRLDTLGISVINNVVDITNYVLMEIGQPLHAF 154 Query: 268 DASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 D ++I +TVR+A +GEK +A+D++ YDL + V+A + +IAG++GG + + Sbjct: 155 DLAKIDGSGITVRQAHAGEKFMAIDHKTYDLELGDYVVADEVGAVAIAGVMGGADSEVTE 214 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 TTD+L+E A + + + + + L + +DS YRFERGVD + + + LIL + GG Sbjct: 215 ATTDLLIEAAQFAALPVRTTSRRLKLKSDSSYRFERGVDPEMIDWASRRCCELILDMAGG 274 Query: 387 TASDICIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEV 444 ++ I +PRK V + ++KR+ GI+VP ++ RIL RLG + K V Sbjct: 275 ELAEGSIYAGSQPQPRKSVTLRLGQLKRILGIEVPADEVERILSRLGNEIESVASQKITV 334 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 PSWR+D++ + DLVEE+ RI+G D+I + + + +SR V+ ++ + Sbjct: 335 IPPSWRRDLDREVDLVEEVARIHGYDKIPQDAAVKMSASHRSDADRVRSR---VRSLMIA 391 Query: 505 RAMMEVVNWSFISKEQSVLFGG-GQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 M E V S +S E S F G Q E L + P+ +R S+LP LL A N Sbjct: 392 AGMNEAVTRSVVSSEWSAAFHGWSQSEALTVTIPMVRGEDCLRLSVLPSLLGARRMNEKF 451 Query: 563 AIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 + ++EV+ VY ++D P+ ++YM + SGR F L Sbjct: 452 DNSPIELYEVAKVYLPRKDDLPD-ERYMVSMT---------SGR----------DFRGLK 491 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 + + P V + + RF + S ++ +K + + LG+ G + F Sbjct: 492 GVIETLVHSLNPTVRVTASRF---SDSLLDVEQACELKVNGK-TLGFLGLLSASAQKQFE 547 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL-VNIIK 738 L P E+ L + ++ + S+ + RDL +VD+ + L + Sbjct: 548 LQQPATVAELDLS---VLEELTVLIPQHFDFSTYPVMTRDLNLVVDETLTWDQLEATVSA 604 Query: 739 NVDRLIDDVTVFDVFQ-GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 + L++ V ++F+ + G GKK V + ++ T ++ + D IV K+ Sbjct: 605 SAGELLEKVEYREIFRDTQKDGAGKKRVLFTITLRAADRTLTGEEADAVRDNIVAACEKQ 664 Query: 798 TNAVL 802 +A L Sbjct: 665 LDAKL 669 >gi|325108812|ref|YP_004269880.1| phenylalanyl-tRNA synthetase subunit beta [Planctomyces brasiliensis DSM 5305] gi|324969080|gb|ADY59858.1| Phenylalanyl-tRNA synthetase beta chain [Planctomyces brasiliensis DSM 5305] Length = 670 Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 171/666 (25%), Positives = 307/666 (46%), Gaps = 50/666 (7%) Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS 212 SD ID+ +T NRSDC+G G+A +L A L+ + + + I+ + + Sbjct: 40 SDFAIDLEVTSNRSDCLGHIGVARELSALYQTPLRIPEATIKTNGKPAGDSIRLENEVPD 99 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C + + GV+ +P+W++ RL+ +GLRS++ +VD+TNYV ++ G P H FD ++ Sbjct: 100 HCPHYTARVITGVKVGPSPDWLKHRLECLGLRSVNNVVDVTNYVLMECGQPLHAFDLDQL 159 Query: 273 SD-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 + VR A GEK++A+D + Y+L VIA R +IAG++GG+ + TT++ Sbjct: 160 KGGQIKVRTASKGEKMVAIDGRTYELDEQTCVIADAERPVAIAGVMGGQETEVGEQTTNL 219 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD- 390 LVEVA + P+++ R+ + L + +DS +RFER +D + + + LI + GG D Sbjct: 220 LVEVADFAPLSVRRTARKLSLFSDSSFRFERQIDRKQIEWASRRCCELIQQVAGGEIHDS 279 Query: 391 ICIARNI-TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG---FSVIGEYDKFEVSV 446 + IA + P ++ ++ L GI + + + +IL LG S GE K++ + Sbjct: 280 VVIAPALPESAPVEVEIRFTKAPELLGIPIEVAEMRQILSSLGLQELSADGERGKYQ--I 337 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 PSWR D+ + DL+EEI RI+G + I P K ++ V RV + Sbjct: 338 PSWRGDLTREVDLIEEIARIHGYENISENDPPQVTAAQK---AIFDRAADLVHRVCNANG 394 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPI------SADMSN-MRTSLLPGLLKATGRN 559 E + +F+S++Q+ +F Q +NP+ S N +R+SL+P LL + N Sbjct: 395 FYEAMTLTFVSEDQANMFNPRQ-----VNPLLKVEHSSRKKDNVLRSSLIPSLLHSRRAN 449 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQ-KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 + ++E++ V+ EG + M + G + G L SE C Sbjct: 450 ERTGTPNAQLYEIARVFTGLKAEGADQTMVVSLVSGQDFLAVKGLLEQLLSEVNCSL--- 506 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 L + + + GR + + E G+ GE ++ D Sbjct: 507 ------------------QLTARPSSAAGFAKGRGAELYLNDEF-WGWAGELDQSVSDTA 547 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 L + + EV + + + T + + ++RD F+++ + + + I+ Sbjct: 548 DLRDAVTVAEVDFEPL---MRHLTLAPQAQAIPQFPAMERDFNFLLEDKVAWSEVASTIQ 604 Query: 739 NV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L+ V ++GK + GKK+ + + T +++ + +IV K+ Sbjct: 605 QAGGPLLRGVQFAGQYRGKGIEPGKKTYLARASFRADDRTLTGEEVDAVHAQIVTACEKQ 664 Query: 798 TNAVLR 803 A LR Sbjct: 665 LAATLR 670 >gi|300727942|ref|ZP_07061320.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bryantii B14] gi|299774784|gb|EFI71398.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bryantii B14] Length = 634 Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 173/640 (27%), Positives = 312/640 (48%), Gaps = 57/640 (8%) Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 + ++++P+++ +++++ CK +A + +P+W++ +L +GLR I+ +VDITN Sbjct: 21 VDNQNMPIDV--EIENTEACKRYACLSIADCEVKESPDWLKNKLSVIGLRPINNIVDITN 78 Query: 255 YVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSI 313 YV + G P H FDA + + VR G + + LD +++ L ++ I + I Sbjct: 79 YVMMAYGQPMHCFDADMVKGHKIIVRTQPEGTEFVTLDGEKHILGERDLSICNAEEPMCI 138 Query: 314 AGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL 373 AG+ GGK +G + T +V++E A + P I +S + G+ TD+ YRFERG+D G+I L Sbjct: 139 AGVFGGKGSGTYETTKNVVLESAYFHPTWIRKSARRHGLSTDASYRFERGIDPNGVIYAL 198 Query: 374 KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE---VKRLSGIDVPIEDSLRILER 430 K LI L GG S +++ +P ++ E V +L G + + I+ Sbjct: 199 KQAAILIKELAGGKVS--MNIKDVYPEPIADFSVDLEYDYVDKLIGKAIGHDTIKNIVTS 256 Query: 431 LGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-----SEPLPLTQVED 484 L ++ E D + VP++R DV+ D+VE+ILRIYG + ++ + L + ED Sbjct: 257 LEMKIVEERDNGLRLDVPAYRVDVQRPCDVVEDILRIYGYNNVEIGTTLNSTLTIQGEED 316 Query: 485 KR----NLSLQQ----SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 + NL +Q + L+ + +N + +++ +V +++NP Sbjct: 317 HKAKLTNLVSEQLVGCGFNEILNNSLSKSSYYSDLNMNVYTQDSTV---------KVMNP 367 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV--SHVYENDTPEGQKYMAAGIRKG 594 +S+D+ MR ++L G L++ RNV+R + FEV +++Y D ++A +++ Sbjct: 368 LSSDLGVMRQTMLFGGLESIVRNVNRKRPNLKFFEVGNTYIYNKDKWTEDSPISAYVQES 427 Query: 595 SSGIEGSGRL----WSDKSE-----ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + +G+ W+ E E +V+ A+ + + D+ F G Sbjct: 428 HIALWLTGKRVQGSWAHADEDSTIYEMKAYVENIFARVGLSAGAVVIKASDNDIFSKGLR 487 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 GR +L G I FGL + + ++ D++ K K K Sbjct: 488 YENRGGR----------ILAEVGVLSLKIKKLFGLQSDVYYADINWDAV---MKAIRKNK 534 Query: 706 KVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKK 763 V S +P V RDLA +VD+++ + NI K + +L+ V +FDV++GK+L GKK Sbjct: 535 IVFKEISKYPAVSRDLALLVDKNVQFLDIENIAKQCEKKLLKSVELFDVYEGKNLPVGKK 594 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 S A+ ++Q T D I +M +++ + K NA LR Sbjct: 595 SYAVNFILQDDNKTLNDKAIDAIMKKLITQLTGKLNAELR 634 >gi|85057414|ref|YP_456330.1| phenylalanyl-tRNA synthetase beta chain [Aster yellows witches'-broom phytoplasma AYWB] gi|93140696|sp|Q2NJZ2|SYFB_AYWBP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|84789519|gb|ABC65251.1| phenylalanyl-tRNA synthetase beta chain [Aster yellows witches'-broom phytoplasma AYWB] Length = 828 Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 211/851 (24%), Positives = 375/851 (44%), Gaps = 91/851 (10%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-LD 59 MK + LK+HL +S T I EV+K + + ++L+ ++ D Sbjct: 7 MKIIENILKNHLLQPLSQNIFVLTNNYIT-EVQKFSPLSKNTNLVVGQILNFQKIQDSQK 65 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ ++ G + +++VCGA N++ G + A GS + N + +KI G+ S GM+C Sbjct: 66 LNLVEVNIGI-KVVKIVCGASNLQNGKKVIVASEGSFLEGINSTLKNKKIYGVFSEGMLC 124 Query: 120 SEKELMLSDDSASIMELP----IDAP-----VGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 + +EL +S+ + E D P +G L + I+++ +TPNR D + Sbjct: 125 ALEELGISNKFLTPQEQEGIYLFDDPNDQIALGSNALIPLGMDGFILELGITPNRGDLLS 184 Query: 171 VRGIALDLVAA----GLGKLKE---INISCPLSSESI-------------------PLEI 204 G A DL A K KE IN S + PL++ Sbjct: 185 HIGFAKDLQAVLASQNSNKKKEKKTINYKTKNSKDQTNRKTTPKLNPDFFAKLPQSPLKV 244 Query: 205 KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPS 264 + + D C + +C ++ + +P W+R L G+ I+ +VDITN + ++ G P Sbjct: 245 QIESDS---CYEYNVCILENITIKPSPLWLRNTLLQSGINPINNVVDITNLILIEYGIPL 301 Query: 265 HVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 H FD+ I + VR+A E I L+ ++ L +++VI + ++AGI+G + Sbjct: 302 HAFDSGTIQKI-KVRKAFPQETITTLNQNDFVLDENDLVITDGKKAIALAGIVGLLESSI 360 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSL 383 TT +++E A + P IA++ + L T+S RFERG+D Q +IP+ + L+++L Sbjct: 361 KPTTTKIILEAAYFSPQTIAQTCQKLKNKTESSLRFERGID-QNLIPLAFQKACQLLVTL 419 Query: 384 CGGTA------------SDICIARNITYKPRKIVF--MNSEVKR-LSGIDVPIEDSLRIL 428 ++ I+ ++ + RKI F +++K L +D I + Sbjct: 420 ANAKITYQPTITKQKIRTNPTISLDLDFITRKIGFSLCPTQIKNWLLNLDYQIHTPKNL- 478 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 ++ + ++ + P R DV+ K D++ ++ R YG ++ P Q+ + L Sbjct: 479 -----TLQNKNEQLNLQAPLRRYDVKIKEDVISDLTRFYGCHKL---PPQTIQIPTQGKL 530 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSL 548 +L+Q R ++++L + E + +S IS E F + ++I+NP+S D +R SL Sbjct: 531 TLKQKNIRELRKLLVNLGFYETITYSLISSEMFEAFAPQKPFIKIMNPLSQDKMILRQSL 590 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK 608 L L++ R D A FE+ Y P +K A + G+ LW + Sbjct: 591 LSSLVEILSYQHKRQTFDTAFFEIGKAY---FPNQEKLSLAFVLSGN----FLNTLWHKQ 643 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 FV L I F+ + ++ S +HPG + + +I+ G G Sbjct: 644 DVSSSFFVT-----KGILEKISSFLGITLTYQKTQKHSNFHPGMQANLLFNNQII-GVIG 697 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSIPISQK--KRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 + HP + L E +L + +S + TKT + V RDL+F+VD Sbjct: 698 KTHPQLNAKHHLK------ESFLCELFLSDEILNTTKTLTFRPIPKFPTVIRDLSFLVDT 751 Query: 727 HIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 + IIK + +FDV+Q + E K+S A++ L D+ Sbjct: 752 KYSFYQIEQIIKQTTPFDLIKCELFDVYQTPTTKE-KQSFALRFFFNNLDKNLEKQDVEH 810 Query: 786 LMDRIVENVVK 796 M +I N++K Sbjct: 811 CMKKITYNLIK 821 >gi|307720837|ref|YP_003891977.1| phenylalanyl-tRNA synthetase subunit beta [Sulfurimonas autotrophica DSM 16294] gi|306978930|gb|ADN08965.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurimonas autotrophica DSM 16294] Length = 778 Score = 214 bits (545), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 219/810 (27%), Positives = 364/810 (44%), Gaps = 63/810 (7%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL + +D + +S +++ T SIGLEV+++ + + KVL E++PD D Sbjct: 1 MIVTKSWLNEWIDLEGISTQELAKTFNSIGLEVDRIHEYQVPAKIVFGKVLECEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G Q+VCGA NVR GL V A G+ +P + + + K+RG++S GM+ Sbjct: 61 KLNICKVDIGSCVR-QIVCGASNVRAGLYVVVATVGAIMP-SGLAIKPVKLRGVDSEGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-----RLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS E+ L D IMEL D +G +++ +D +I++ LT NR DC+ +RG Sbjct: 119 CSASEIGLPDLGKGIMEL--DESIGKFVLGQEVNENPLFNDDLIEIELTANRGDCLSIRG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIP----LEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 +A DL AA +KE + I L + DLD + K + + Sbjct: 177 VARDLSAAFDRPIKEYEKTDNDEKRGIGRILYLSHEKDLDVNLRYKAIDL------KELT 230 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 P ++ RL + + IT YV+ G + + T + IL Sbjct: 231 LPFIVKLRLGQIEDTRKCDVEAITLYVTHSTGVILRAYK----HEFFTNDDEPMAKVILG 286 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 D Y + DG+I SI GII + N VL+E + P I++ Sbjct: 287 EDKNNY-----ACIKTQDGKIASIVGIIQKDESKVTKNEGVVLLEASYIPPDIISKKMSQ 341 Query: 350 LGIITDSR-YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 I + Y+ RG + + + L + + LI + + I + ++K + ++ Sbjct: 342 SKIESGPMFYKTSRGSEPE-LTGGLSYCIDLIEANSVSSTFSGSIELSNSFKEKIVIVTK 400 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 E+ + G D+ +IL+ LGF V DKF VSVP +R D+ K D+VEEI+R+ Sbjct: 401 QEIDAIIGADIDKVVITKILKNLGFDVSKSSVDKFVVSVPQFRHDIVNKQDIVEEIVRMV 460 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFG 525 G+D I S+P L + + + + + A E V++ F K+ +S F Sbjct: 461 GIDNIPSKPFALQEANRLEDNYFEYKKRSLFRHRCAQSGFFESVHFVFDEKKVLESYGFE 520 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 ++ELE+LNPI + +R +LL GLLKA NV A +FE+ V+ E K Sbjct: 521 TTKKELELLNPIVQTLDTLRPTLLTGLLKAASANVKNGYASVKLFEIGSVFTPLREESYK 580 Query: 586 --YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 ++ +G ++ S + SG+ ++ F AD + +E L Sbjct: 581 ISFIFSGDKENES-LANSGK------PQKVDFAFFTQKIADIIGDVE-------LSEYET 626 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 H +S + E V G HP + + L F LD I +T Sbjct: 627 KHKLSHTYQSAQVFLKGEAV-GELFRVHPEVEKAYDLDTT---FMCELDFAKIPYGLKTA 682 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF--DVFQGKSLGEG 761 +K + +S RDL+ I+ + + + ++I N L + V + D + +SLGE Sbjct: 683 QQKSKYQASF----RDLSIIMPKDMSYEKVKDVI-NAHALKEVVRFYPVDRYSDESLGEN 737 Query: 762 KKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 S++++ ++Q + T ++DI M+ I+ Sbjct: 738 -MSLSLRFVLQSDEKTLEEEDITSAMNSIL 766 >gi|296122509|ref|YP_003630287.1| phenylalanyl-tRNA synthetase, subunit beta [Planctomyces limnophilus DSM 3776] gi|296014849|gb|ADG68088.1| phenylalanyl-tRNA synthetase, beta subunit [Planctomyces limnophilus DSM 3776] Length = 673 Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 175/669 (26%), Positives = 308/669 (46%), Gaps = 52/669 (7%) Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS 212 S +ID+ +T NR DC+G G+A ++ A + + I ++ I+ ++D Sbjct: 40 SQTVIDLEVTSNRPDCLGHLGVAREIAAITKQGMCQPEIKLQECADKAADHIQISIEDQQ 99 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C + ++GV+ +P W+ RLK++G+ +I+ +VD TNYV + P H FD ++ Sbjct: 100 FCPVYVARVIRGVKVGPSPAWLVDRLKSLGIATINNVVDATNYVMFECAQPLHAFDFQKL 159 Query: 273 S-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 + +TVR+A GE I A+D +EY L+ VIA ++AG++GG + TT + Sbjct: 160 AGSQVTVRKARDGETIKAIDQREYRLTSTMGVIADQRGPVAVAGVMGGFESEISHETTTI 219 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA-SD 390 L+E A ++ +++ + ++L + + S YRFER +D G+ SLI L GG S Sbjct: 220 LLESASFNSLSVRNTSRSLELFSPSSYRFERALDQHGVAWANARCASLIQELAGGEVLSG 279 Query: 391 ICIARNITY---KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSV 446 IA + KP ++ F S + + GI+VP + +IL+ LG + + V Sbjct: 280 EVIAGELASAFGKPIELRF--SRIPEILGIEVPSTEVSQILQLLGCQISSSTPQTITVLA 337 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 PS+R+D+ + DL+EE+ RIYG + I ++ P+PL R + + + V+R L Sbjct: 338 PSFRRDLVREIDLIEEVARIYGYENIPENVPVPLC---SSRKTTADRVAEK-VRRTLVGS 393 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSN------MRTSLLPGLLKATGRN 559 E + +F S+ Q F + + D S +R SL+P LL N Sbjct: 394 GFFEAMTVAFTSESQQNWFA----PRSVTTSLMVDHSRRRNENLLRQSLVPSLLNVRREN 449 Query: 560 VDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 + R D +FE++ VY E Q+ G G ++ G L + CR Sbjct: 450 IRRGNHDAHLFEIARVYLGSEITADCAQQPAVLGCVSGLPFLDLKGILAAVAMA--CRSD 507 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 + +L P+ GA W + R G+ GE HP I+ Sbjct: 508 IRLETTESSLESFAPY---------RGAELWLNGKR-----------WGWCGELHPEIVQ 547 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 G+ + + EV + + + + + + S+ RDL F + + + L Sbjct: 548 HAGMKDQVTVAEVDMGLLEALFQAAPQFRAIPQYQSM---IRDLNFSLAEEVQWIDLEKT 604 Query: 737 IK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I+ L++ V ++GK LGEG+KS ++ + + T +++ + ++ + + Sbjct: 605 IQLAAGPLLEAVRFSGQYRGKQLGEGQKSYLATLVYRSFERTLTSEEVDEIQKNVMNSCL 664 Query: 796 KKTNAVLRS 804 + AV+RS Sbjct: 665 EHHGAVVRS 673 >gi|322437156|ref|YP_004219368.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] gi|321164883|gb|ADW70588.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX9] Length = 693 Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 180/670 (26%), Positives = 310/670 (46%), Gaps = 46/670 (6%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLC 214 + D+ +T NR D + G+A ++ A L +++S P + ++ + D LC Sbjct: 50 VFDMDITTNRVDAMNHYGMAREVAAIYDLPLHALDVSLPDAGAAETAFPVRIEAQD--LC 107 Query: 215 KGFAMCCVKGVRNNVAPN--WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 F ++GV VAP + ++GL+ IS VD+TNYV G+P+H FD +I Sbjct: 108 GRFTARVLRGV--TVAPTDGVIGGYFDSLGLKKISNAVDVTNYVLQGMGHPTHAFDLDKI 165 Query: 273 SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 + VRRA +GE+I LD L D++V+A + + +AG++GG + T +VL Sbjct: 166 EGGIVVRRAKAGEQIKLLDGTTRTLVVDDLVVADEVKALGLAGVMGGWDSMITAETKNVL 225 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-LILSLCGGTAS-- 389 VE A + P I S + I TD+ +RFERG D P+ +VS LIL CGG Sbjct: 226 VEAAWFQPATIRASSRRHLIHTDASHRFERGADFAAA-PIANALVSKLILEACGGRVEGE 284 Query: 390 --DICIARN--ITYKPRKIVFMNSEVKRLSGIDVP-----IEDSLRILERLGFSVIG-EY 439 D+ +A + T + +E +R G V E R L LG ++ Sbjct: 285 LIDVVVAEHEAATANRGTVALSVTEARRHLGTTVEPDGINAEVIHRYLTALGCTLTPVSV 344 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYV 498 D +EV +PSWR D+ + DL+EEI R+YG + + P P ++ R V Sbjct: 345 DGYEVRLPSWRLDLTREIDLIEEIARVYGYNGFANTLPTPGVVIDHP-----TARAERAV 399 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 + L + E ++ +F S +S F G +E+ NP++ + +N+R SLLPG++ Sbjct: 400 RERLLALGYSEALSSTFASAAESAQFAAGVAAVELENPLNEEAANLRPSLLPGMVTMLAH 459 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW--SDKSEERCRFV 616 N++R + + +FE V+ T E + M+ + G +G+ L+ +D S Sbjct: 460 NLNRDVLNVRLFETGAVFSGGTAEVSEAMSLSL--GITGVSPVSNLYLAADAS------- 510 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 ++ K S++ F + L F + A + GR+ + ++V FG+ + Sbjct: 511 -FYELKGAVESLVGLFAA-PGLTFAAEASPVFEAGRAAAASVNGKVV-AQFGQLAASEGA 567 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 + P+ V L ++ K T K+ LS V+RD +F+ + G + Sbjct: 568 KRKMRQPVYVATVDLAALLAMPLKHTTAKE---LSRFQAVERDFSFVFANSVTWGDVEGA 624 Query: 737 IKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I+++ + + +VF+ + G S ++ + Q L T D+D+ I+ + + Sbjct: 625 IRSLKIAELQSLRPIEVFRDEKKWPGVYSTLMRTVFQSLDRTLTDEDVTGWWSAII-SAL 683 Query: 796 KKTNAVLRSS 805 + V+R S Sbjct: 684 QGLGGVIRDS 693 >gi|299136320|ref|ZP_07029504.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] gi|298602444|gb|EFI58598.1| phenylalanyl-tRNA synthetase, beta subunit [Acidobacterium sp. MP5ACTX8] Length = 706 Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 178/680 (26%), Positives = 316/680 (46%), Gaps = 70/680 (10%) Query: 158 DVSLTPNRSDCIGVRGIALDLVA---AGLGKLKEINISCPL----SSESIPLEIKFDLDD 210 ++ +T NR D + G+A + A L L E + P+ + E P+ I + Sbjct: 47 EMDITTNRVDAMNHYGVAREAAAIYDVALAPLNE-GTAAPIVETVAGEGFPVRI----EA 101 Query: 211 SSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDAS 270 LC F ++GV A + + A+G + ISA VD+TN+ L G P+HVFD Sbjct: 102 RDLCGRFTARVIRGVTVGPAKGLVAEYFAALGQKPISAPVDVTNFGWLAMGQPTHVFDLD 161 Query: 271 RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 + + VRRA +GEK+ LD E L D++V+A + + +AG++GG + + T + Sbjct: 162 TLEGGIVVRRAKAGEKLRLLDGTERTLVADDLVVADEKKALGLAGVMGGWDSRVTETTKN 221 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS-LILSLCGGTA- 388 +LVE A +DP I S + G+ TD+ +RFERG D P+ H+V+ L++ GG Sbjct: 222 ILVEAAWFDPATIRASSRRHGLHTDASHRFERGADFNAA-PLGNHLVTRLVVEQSGGEVV 280 Query: 389 ---SDICIA--RNITYKPRKIVFMNSEVKRLSGIDVPIEDSL----------------RI 427 D+ + + T + IV SEV+R G +ED+ + Sbjct: 281 GPLVDVIVPELQAKTSERAPIVLRVSEVQRHLG--TTLEDATWSGGENTSGLSENVVEQY 338 Query: 428 LERLGF------SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQ 481 L LG +V GEY V +PSWR D+E + DL+EE+ R+YG ++ ++ LP Sbjct: 339 LGALGCVLTPTGAVAGEYG---VQLPSWRLDLEREIDLIEEVARVYGYNKF-ADTLPTFA 394 Query: 482 VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR-ELEILNPISAD 540 +Q T ++ L S E ++ +F S E++ FG + + + NP+S + Sbjct: 395 GTVVEQPHAEQEHT--IRETLRSLGFSEAISSTFTSAEEAATFGDAKTGAVAMGNPLSEE 452 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG 600 +R SL+PG+ N+ R + D +FE+ V+ T E +++ G+ G++G Sbjct: 453 AGMLRPSLVPGMATMLAHNLHRDVTDVRLFEMGTVFTGSTAEVREHT--GLALGATGAAV 510 Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA-PSWYHPGRSGIIKTS 659 + L+ + ++ K ++ F S+RF++ + P+W PGR Sbjct: 511 ATSLYGAQD------ALFYEMKGAIERLLAKFAG--SVRFDAESLPAWIEPGRGARALLE 562 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 E+V FGE L EV + + + ++ ++++ S V+RD Sbjct: 563 GEVV-AVFGELSAAESQRRKLRQTCVFAEVRAELLLLRTLRQPVSREI---SRYQAVERD 618 Query: 720 LAFIVDQHIPAGTLVNIIKNVD----RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +F+ + + ++ ++ + I V +F +GK++ G S ++V+ Q + Sbjct: 619 FSFVFPDAVRWEQIAEALRGLNIAETQRIAPVEIFRDAKGKAVAAGHYSALVRVVFQSNE 678 Query: 776 DTFRDDDIRILMDRIVENVV 795 T ++D+ ++ V +V Sbjct: 679 RTLTEEDLGGWSEKTVSALV 698 >gi|225166357|ref|ZP_03728036.1| Phenylalanine--tRNA ligase [Opitutaceae bacterium TAV2] gi|224799398|gb|EEG17948.1| Phenylalanine--tRNA ligase [Opitutaceae bacterium TAV2] Length = 506 Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 154/452 (34%), Positives = 233/452 (51%), Gaps = 21/452 (4%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR--EALSPFTIVKVLSVERNPD 57 MK +LSWL ++D TD++L +I D L +GLEVE V + L I K+LS E++P Sbjct: 1 MKISLSWLSRYIDLTDLTLAQITDALPMLGLEVEDVTTAGLQPLKNVVIGKILSYEKHPK 60 Query: 58 LD-CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 D ++ R+DTG Q+VCGA N + A PG+ +P N + + K+R IES Sbjct: 61 ADKLSVCRVDTGAPTGPHQIVCGAKNFVANDIVPVALPGAILP-GNFEIKISKLRDIESQ 119 Query: 116 GMMCSEKELMLSDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 GMMCS +EL L + ++ L P+G ++D+ D ++D+S+T NRSDC+G G+ Sbjct: 120 GMMCSARELGLGQNHEGLLILTSRKLPLGTSINDHFPAPDTVLDLSITANRSDCLGHIGV 179 Query: 175 ALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV 229 A DL A L L S P S + C + ++ VR Sbjct: 180 ARDLAAWFQRPLRLPDLPPPPPSAPAPSADAADLLTTVTTTIDTCPYYTATAIRNVRVAP 239 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P+W+ + L+AVGLR I+ +VDITN+V L+ G P H FDA+ I + +R A GEKI Sbjct: 240 SPDWLARDLEAVGLRPINNIVDITNWVMLETGQPLHAFDAANIGGHQINIRPAAPGEKIT 299 Query: 289 ALDNQE-YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 LD +L + VIA + +I GI+GG+++G TT++++E A + P I ++ Sbjct: 300 LLDQGRIVELDTTDCVIADAAKAMAIGGIMGGENSGVTPATTNIVLEAAWFRPGPIRKTS 359 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP----RK 403 + L + TDS R+ R D ++ + +LIL GGT + R I P R Sbjct: 360 RRLALPTDSAQRYTRDADPAAVLLAARRATALILEHAGGT---LVGPRVIVGAPPRTDRT 416 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV 435 I + V+ G ++ RLGF+V Sbjct: 417 IELTANYVRARCGFEIDANTIANTYRRLGFTV 448 >gi|78777068|ref|YP_393383.1| phenylalanyl-tRNA synthetase subunit beta [Sulfurimonas denitrificans DSM 1251] gi|93140717|sp|Q30S83|SYFB_SULDN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|78497608|gb|ABB44148.1| phenylalanyl-tRNA synthetase beta subunit [Sulfurimonas denitrificans DSM 1251] Length = 778 Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 234/833 (28%), Positives = 378/833 (45%), Gaps = 107/833 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL + +D + +S +K+ TL SIGLEV+ + + E +VL +++PD D Sbjct: 1 MIVTRSWLNEWIDISTISTDKLVKTLNSIGLEVDSISSYEVPQKIVFGRVLECKKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G Q+VCGA NVR GL V A G+ +P+ +I V +RGIES GM+ Sbjct: 61 KLNICQVDIGVSTR-QIVCGASNVRAGLDVVVATIGAVMPDGTIIKPV-TLRGIESEGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-----RLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS KE+ L+D ++ I+E ID+ +G +S SD II+V LT NR DC+ +RG Sbjct: 119 CSAKEIGLADINSGIIE--IDSSIGKYKIGEEVSQNHLFSDDIIEVELTANRGDCLSIRG 176 Query: 174 IALDLVAAGLGKLKEINIS------------CPLSSE-SIPLEIKFDLDDSSLCKGFAMC 220 +A DL AA L+E I LS E ++ + I++ D Sbjct: 177 VARDLSAAFDKPLRERKIQEDEDKRVGIGRILSLSHENNLGVNIRYKAVD---------- 226 Query: 221 CVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR 280 +N P +R RL + + S + + Y + G +D + Sbjct: 227 ----FKNLTLPFIVRLRLSQLDDKKESDVESLMLYATHSSGVILRAYDYALF-------- 274 Query: 281 ACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP 340 C+ ++ +A + D + V+ D ++ SI G++ + + VL+E P Sbjct: 275 -CAKDETMAKISLCRDKNGFASVMTKDKKV-SIVGVMQEELFKVAHSNGVVLIEATYIPP 332 Query: 341 INIARSGKNLGIITD-SRYRFERGV--DL-QGMIPVLKHIVSLI-----LSLCGGTASDI 391 I++ + I S YR RG DL QG L + +S+I S+ GGT Sbjct: 333 DVISKKMQENKIPAGISYYRASRGSEPDLNQG----LDYCISVIEDNSESSVYGGT---- 384 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY-DKFEVSVPSWR 450 I + ++ + I E+ + G ++ +IL+ LGF D F + VP +R Sbjct: 385 -IEIDEPHEDKIISLNKKEIDEIVGANIDKAKITKILKNLGFDTTKSLADNFVIIVPKFR 443 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL-----ASR 505 D+ K D+VEEI+R+ G+D I S+P T+ S Y KRV A Sbjct: 444 HDIVNKQDIVEEIVRLVGIDNIPSKPFTFTETN-----SFSSDYYDYKKRVTYRHKAAFS 498 Query: 506 AMMEVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 E V++ F K+ Q F E+LNPI + +R++LL GLL+AT N++ Sbjct: 499 GFFESVHFVFDEKKVLQEYGFEILDESKELLNPIVNTLDTLRSTLLCGLLRATSNNINNG 558 Query: 564 IADFAIFEVSHVYENDTPEGQKY--MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + +FEV V+ + E K + +G R+ S L + + F LF Sbjct: 559 YSSVKLFEVGSVFNSQREESLKMALIFSGDREAES-------LANTGKPAKVDFA-LFVQ 610 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 K +VI F LR + HP + I E+ +G HPN+ + L Sbjct: 611 KVS--NVIGEF----ELREYKTKHTLSHPYQCAEIFIK-EVSVGEIFRLHPNVEQKYDLD 663 Query: 682 -NPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KN 739 +C E+ + +P K ++ K + +S RDL+ ++ Q + + N+I + Sbjct: 664 VTYMC--ELNFNKLPNDLKTAKQSSK--YQASF----RDLSIVMPQEMAYEKIKNVIDAS 715 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + + V D + KSLGE S++I+ ++Q T +++I M+ I+E Sbjct: 716 STKELVRFYVVDKYSDKSLGEN-MSLSIRFVLQSFDKTLEEEEITNAMNTILE 767 >gi|51892244|ref|YP_074935.1| phenylalanyl-tRNA synthetase beta subunit [Symbiobacterium thermophilum IAM 14863] gi|81389201|sp|Q67QF2|SYFB_SYMTH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|51855933|dbj|BAD40091.1| phenylalanyl-tRNA synthetase beta subunit [Symbiobacterium thermophilum IAM 14863] Length = 892 Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 140/451 (31%), Positives = 241/451 (53%), Gaps = 15/451 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLD 59 M+ + +WLKD++ +S +++ + LT+ G+ VE V + + +V+++ER+P+ D Sbjct: 1 MRVSYNWLKDYVKVGLSPQELAERLTARGVVVENVVRANPGVEGVVVGRVVAMERHPNAD 60 Query: 60 CA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q++ GA NV VG L A PG+ +P + + V+K+RG++S GM+ Sbjct: 61 TLWVCQVDVGGGRVLQILTGAQNVTVGALVPAAVPGAKLP-GGVTMGVKKLRGLDSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPV--GGRLSDYLELSDPIIDVSLTPN-RSDCIGVRGIA 175 CSE EL + DD+ I+ LP + + G +++ L L+D I ++ LT N + C + G+A Sbjct: 120 CSEAELQVGDDADGILILPPEPGLEPGMDVAEVLGLNDWIFELDLTANYAAHCQSMLGVA 179 Query: 176 LDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM 234 ++ A G++ + P + I +D LC + V+GV+ +P W+ Sbjct: 180 QEVAALVGGEVNRPSTYTPDAPGTDVRNLIAVQIDAPDLCSRYVARVVRGVKIGPSPLWL 239 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQ 293 + RL+A G+R I+ +VDI N+V L+ G P H FD ++I + VRRA +GE+ LD Q Sbjct: 240 QARLRAAGMRPINNIVDIANFVMLETGQPLHTFDYAQIRGQRIIVRRARTGERFTTLDGQ 299 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 E + +VIA R ++AG++GG+ + D T D+L+E A +D IN R+ + Sbjct: 300 ERVMDESVLVIADAERPVALAGVMGGEDSEVTDQTADILIESAHFDNINNRRTSLRYNLP 359 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA----SDICIARNITYKPRKIVFMNS 409 +++ RF +GVD G + L+ L GGT D+C + P I+ Sbjct: 360 SEASKRFTKGVDPSGCVAAADRAAQLMAELAGGTVVAGHVDVCPRPAV---PPVILLRTE 416 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 L+G+ + E L LG +V+ D Sbjct: 417 RANALTGLKLTPERMAEHLRSLGMAVLTPAD 447 Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 106/373 (28%), Positives = 168/373 (45%), Gaps = 31/373 (8%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 V VP+ R DV + DL+EEI R G D I PL L + R +Q + R Sbjct: 539 VVVPTRRSDVAVEVDLIEEIARCEGYDAI---PLELPVLSSHRGGRSRQGEVKLAARRAL 595 Query: 504 SR-AMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKATG 557 + + EV+ S + +R L + NP+ D S +RT LLP LL Sbjct: 596 AAAGLTEVLTHSLTHPRVYDMLALPEDDPNRRCLALANPMYEDRSTLRTMLLPCLLDVVR 655 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 N +R + D AIFE+SHVY EG++ + G + L + E R D Sbjct: 656 YNANRQVRDLAIFEISHVYR--PVEGEQLPDEPLMIGLAMTGNLAPLGWNSPE---RPAD 710 Query: 618 LFDAKADALSVIEPFVS---LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 F K V+E ++ + RFE A HPGR + + V G GE HP + Sbjct: 711 FFALK----GVVEHLLAELGVPDARFERSAHPSLHPGRQAALVVGGKPV-GLLGELHPQV 765 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGT 732 + + L VY+ + + + V+ + V RD+A +VD + A Sbjct: 766 QERWELPG-----RVYVAELAFAPLMEAMLPQAVYRPVPRFPAVTRDVAVVVDLDLTAHR 820 Query: 733 LVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 L I+ L+++V +FDV+QG+ + EG++S+A +++ + T D+++ + +R+ Sbjct: 821 LETAIREAGGDLLEEVRLFDVYQGERVAEGRRSLAYRLVYRAADRTLTDEELEPVHNRVR 880 Query: 792 ENVVKKTNAVLRS 804 E +K A LRS Sbjct: 881 E-ALKALGAELRS 892 >gi|224437851|ref|ZP_03658798.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter cinaedi CCUG 18818] gi|313144300|ref|ZP_07806493.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] gi|313129331|gb|EFR46948.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter cinaedi CCUG 18818] Length = 795 Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 227/854 (26%), Positives = 383/854 (44%), Gaps = 114/854 (13%) Query: 2 KFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 K+ LS D HLD + ++C L+SIGLEVE + K+LS E +PD Sbjct: 5 KYLLSQFVDISHLD----INEVCVRLSSIGLEVESAYALSVPKKVVVGKILSYEPHPDAS 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 + ++ G QE+Q+VCGA NV+ A G+ IP M++ +RG+ES Sbjct: 61 KLNVCKVSIGT-QELQIVCGASNVKAESYVAVALQGAVIPNGKNGEMLIQKTILRGVESC 119 Query: 116 GMMCSEKELMLSDDSASIMELPIDA---PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM+CS EL L + IM L A +G LS+ D +I+V +TPNR DC+ V Sbjct: 120 GMLCSSTELGLPKINEGIMILDESAGRLDLGKELSELPIFDDYVIEVGITPNRGDCLSVL 179 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDS-SLCKGFAMCCVKGVRNNVAP 231 GIA +L +LK + D+D+ +L G + + + N Sbjct: 180 GIARELATCYELRLKR----------------EIDMDNVITLGLGRVLQILTDEKINAHL 223 Query: 232 NWMRQRLK--------AVGLRSISALVD--ITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 + +K A+ L L + + N++ + +A ++ R Sbjct: 224 LYRVVEIKQAYLPLDIALALARNETLSEDIVCNFLEFGTYMTGVILNAYKL-------RE 276 Query: 282 CSGEKILALDN---QEYDLSPDN---VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 C + I+ LDN + + D + ++ ++ I G +H G +++E Sbjct: 277 CESKDIV-LDNGLAAQLRIKKDENGLEAVFANEKLSVIGVSYGERHFGIRSEI--LIIEA 333 Query: 336 ALWDPINIARSGKNLGIITDSR--YRFERGV--DL-QGMIPVLKHIVSLILSLCGGTASD 390 + +P ++A++ + I D++ YR RG DL QG+ + K +VS SD Sbjct: 334 SYVNPNSLAKALYDNAIKGDTQLTYRTTRGSNPDLEQGIEFLCKKMVS---------TSD 384 Query: 391 ICI---ARNITYKPRKIVFMNS--EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FE 443 + + + NI ++ + + +L G ++ E+ IL+RL F + D+ F Sbjct: 385 VLVYSGSHNIAQSTDEVSIKTTFGAINQLIGTELEKEEIAMILKRLDFKLDATCDENFFM 444 Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 +SVP +R D+ D+ EE++RIYG+D I S PL Q + + TR + L Sbjct: 445 ISVPPYRHDIHRIQDVAEEVMRIYGIDNIPSTPLYCLQTHNANSTYFAYKYTRDLAHRLI 504 Query: 504 SRAMMEVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + +E +++ F S + Q + F + LE+LNPI+ D+ +RTSLLP LL + RN + Sbjct: 505 ANGFVECIHYVFASSQRLQELGFVRLEENLELLNPITNDLDTLRTSLLPSLLDSIKRNEN 564 Query: 562 RAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSE----ERCRF 615 + A+FE+ VY+ E K ++A+G ++ W S +RC Sbjct: 565 FGFKNIALFEIGSVYDCKRNESGKLAFVASGYKEDECYPHTKPNKWDFFSFAEVCQRC-- 622 Query: 616 VDLFDAKADALSVIEPFVSLDSL--RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 L I + D L RF + HP +S + + + G + HP Sbjct: 623 -----LGEVGLKNIRDESNKDELLSRFGFMSEKILHPYQSAFVYVKGKPI-GIIAKIHPQ 676 Query: 674 I-LDFFGLSNPICGFEVYLDSIPISQKKR-TKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 I D F IC E+ I+Q + +K +K V RDL ++D+ IP Sbjct: 677 IDSDIF-----ICEVELQSSDFAITQAQEFSKYQKSV---------RDLTILIDREIPFY 722 Query: 732 TL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + +II+ + +V DV+ +SL E K +++I++++Q T +D + ++D I Sbjct: 723 RVRESIIRAELEFLQNVYPIDVYFDESL-ENKMALSIRMVLQSNDGTLKDTQLNEVVDNI 781 Query: 791 VENVVKKTNAVLRS 804 + + + A LRS Sbjct: 782 LALLQDRFQATLRS 795 >gi|213650870|ref|ZP_03380923.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 331 Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 196/334 (58%), Gaps = 6/334 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 + D +VIA + IAGI GG+H+G + T +V Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVNGETQNV 331 >gi|254458382|ref|ZP_05071807.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] gi|207084690|gb|EDZ61977.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacterales bacterium GD 1] Length = 777 Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 219/827 (26%), Positives = 367/827 (44%), Gaps = 98/827 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL + +D + ++ E + T +IGLEV+++ + E + +VL E++PD D Sbjct: 1 MIVTRSWLNEWIDLSGITTEDLAKTFNAIGLEVDRMQSYEIPKKIIVGRVLECEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q+VCGA NVR GL V A G+ +P+ +I V K+RG+ES GM+ Sbjct: 61 KLNVCKVDIGTSIR-QIVCGASNVREGLDVVVATIGAVMPDGTVIKPV-KLRGVESEGMI 118 Query: 119 CSEKELMLSDDSASIMELPID---APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS KE+ L D + I+EL +G + SD +I++ LT NR DC+ +RG+A Sbjct: 119 CSAKEIGLEDCQSGIIELDSSIGKYELGQEVCSLATFSDDLIEIELTANRGDCLSIRGVA 178 Query: 176 LDLVAAGLGKLKEINIS------------CPLSSES-IPLEIKF---DLDDSSLCKGFAM 219 DL AA +KE NI+ LS E+ + + +++ DL D +L Sbjct: 179 RDLSAAYDRPVKETNINEDEDRRVGIGRILSLSHENDLDVNLRYRAVDLKDLTL------ 232 Query: 220 CCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 P ++ RL + + + + YV+ G ++ Sbjct: 233 -----------PFIVKLRLAQIEDSRETDIEALMLYVTHSSGVILRAYNYGFF------- 274 Query: 280 RACSGEKILALDNQEYDLSPDNVVIAS--DGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 C+ + +A + +L D AS S GII + + N VL+E + Sbjct: 275 --CAENETMA----KIELKKDENGYASIMSKEKASTVGIIQEEASKVTYNEGTVLLEASY 328 Query: 338 WDPINIARSGKNLGIITDS-RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 P I++ + + + YR RG + P L + L+L ++ Sbjct: 329 IPPDIISKKMQESKMESGPMYYRTSRGSE-----PELNQGLDFCLNLIESNSNSSVFGGT 383 Query: 397 I----TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI-GEYDKFEVSVPSWRQ 451 I +Y+ + + +E+ + G + +IL LGF + F +SVP +R Sbjct: 384 IELCDSYENKIVSVTKNEIDEIIGAKIDKVKITKILRNLGFGTTKSSSENFVISVPRFRH 443 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ K D+VEEI+R+ G+D I S+P ++ + + + + A E Sbjct: 444 DISHKQDIVEEIVRLVGIDNIPSKPFIFSESSKLEDDYFEYKKRSIYRHKAAQSGFFE-- 501 Query: 512 NWSFISKEQSVL----FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 N +F+ E+ VL F +LE+LNPI + + +R +L+ GLLKA +NV + Sbjct: 502 NVAFVFDEKRVLNEYGFNTTDEKLELLNPIVSTLDTLRPTLMTGLLKAASQNVKNGVTSV 561 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 +FEV V+ E K + I G + E L + ++ F +D + Sbjct: 562 KLFEVGSVFSPLREESLK--MSFIFSGDTQKEN---LANAGKPQKVDFAFFTQKISDVIG 616 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICG 686 E LR S H +S + + E V+G HPN+ D +GL + IC Sbjct: 617 EFE-------LRQYETLHSLSHIYQSAELLQNGE-VMGELFRVHPNVEDSYGLEATYICE 668 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK--NVDRLI 744 LD + +S + K S RDL+ I+ + + + N+I+ + + LI Sbjct: 669 ----LDFVKLSYGLKIAKKS----SKYQAAFRDLSIIMPEAMSYEKVKNVIEAHSSEELI 720 Query: 745 DDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 V D + +SLGE S++I+ ++Q T ++DI MD I+ Sbjct: 721 RFYPV-DKYSDESLGEN-MSLSIRFVLQSFDKTLEEEDITSSMDSIL 765 >gi|157738255|ref|YP_001490939.1| phenylalanyl-tRNA synthetase subunit beta [Arcobacter butzleri RM4018] gi|157700109|gb|ABV68269.1| phenylalanyl-tRNA synthetase, beta subunit [Arcobacter butzleri RM4018] Length = 774 Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 212/834 (25%), Positives = 378/834 (45%), Gaps = 91/834 (10%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL++ ++ +++S + IC TL +IGLEV+ +++ + S + KVL E++PD D Sbjct: 1 MIITRSWLEEFINISNISTKDICKTLNAIGLEVDSLESFDIASKVVVGKVLEKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA NV G A G C NN I+ K+RG+ES GM+ Sbjct: 61 KLNVCQVDLG-DKTVQIVCGASNVDAGQFVAVANIG-CDLGNNFIIKEAKLRGVESNGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L + IM L + +G L DY +L D II++ LTPNR DC+ + GIA Sbjct: 119 CSSTELGLPKLNDGIMVLDNSIGELVLGKELRDYKKLCDDIIEIGLTPNRGDCLSIYGIA 178 Query: 176 LDLVA-----------------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFA 218 +L A +G+L EIN ++++ I F F Sbjct: 179 RELSAFYDIDLIEQDKQISYSEFSIGQLLEINCDSHINADLTYRAIDF--------SNFK 230 Query: 219 MCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 + + +R + + DI N ++ Y +H I + T Sbjct: 231 LSLINRLRTAIIGKYENSN-------------DIKNILT----YATHTMGV--ILNAYTK 271 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVAL 337 +A ++ LD ++ + D + + ++ +I +H D N +D +VE + Sbjct: 272 EKAIKNGELYILDVKKDENGFD--AVYGNEKLSTIC----VEHKEIDVSNISDFIVEASY 325 Query: 338 WDPINIARSGKNLGIIT-DSRYRFERGV--DLQGMIPVLKHIVSLILSLCGGTASDICIA 394 +P I++ I T + Y+ RG D++ + +S + +L + Sbjct: 326 VNPDLISKRVYEKKIKTGEIYYKATRGSEPDIEFGMNYFSSYISKLGALIYKGNENF--- 382 Query: 395 RNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQD 452 I K + + +N +V + G + + RIL LGF V D V +P +R D Sbjct: 383 --IEDKEKASIDVNVHKVNSIIGQTINKFEIERILVSLGFEVKESIDDILIVKIPHFRHD 440 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 ++ AD+ EEI+RI G+D I S+PL + +V S + ++ E + Sbjct: 441 IKNIADITEEIVRIIGIDNIISKPLEIDEVNRVNKTSKDLIKKNKLRFKAIENGFFETLT 500 Query: 513 WSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + F SKE Q F + +LE++NPI +++ RT++L L++A N A F Sbjct: 501 YVFASKEDLQKYGFKTVKDDLELINPIVKELNTYRTTILLNLVEACSNNFKTGSRSTAFF 560 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 E+ +++ + E +K A I+ G+ +E K+ +D F L+ I Sbjct: 561 EIGTIFDENRNESKK--IAFIQTGAMELEDISNAGKPKN------IDFFAFAKKILNTIG 612 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 F D + S+ HP ++ + + V GY + HP++ F L++ E+ Sbjct: 613 KF---DLEPMSEISNSFIHPYQNANVFIDGKNV-GYICKLHPSVCLDFDLNDTFVA-EID 667 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTV 749 +++ + + K S K+DL+ I + + + I +++ I + Sbjct: 668 FEAV------KDELLKTSSYSKFQSSKKDLSIIAPKSLEYKEIKKAINSLNNPNIKQYNL 721 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++ + LGE +S+ I+ ++Q + T +DDI +++ I+E + +K + LR Sbjct: 722 IDIYSDEKLGEN-ESLTIRFVLQSDEKTLEEDDINSIINSILEVLKQKLSIGLR 774 >gi|317011247|gb|ADU84994.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori SouthAfrica7] Length = 763 Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 214/832 (25%), Positives = 386/832 (46%), Gaps = 99/832 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE + A + KVL E+ P + Sbjct: 1 MKLSVNDLNVFVNTPKDIAKLCENLSCLGLEVESCVSCAAPKNVVVGKVL--EKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDIGK-EVLQIVCGAKNVAPNQFVPVALKGAII--GSTTIAKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 +CS EL + I+EL + +G L++Y + ++++SLTPNR DC+ V G+ Sbjct: 116 ICSSTELGFPKINDGILELDESIGELVLGKELNEYALFNTHVLEISLTPNRGDCLSVLGV 175 Query: 175 ALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A ++ A LK I ++ S+SI L+I D + S + +C N+ Sbjct: 176 AREISAFYRTPLKPIKALNFTPKSDSIVLDI--DKNIQSHLAYYLIC------NHSLKTP 227 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 + +L ++S D+ N++ + + +A ++ + + L++ N Sbjct: 228 LSIKLSLAHNNALSE-NDLNNFIEFGMHFSGVIMNAYHLN-----AYSLNTPIDLSVKND 281 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKNL 350 E L V + ++ +IA KH D ++ +L+E + DPI+++ + K+ Sbjct: 282 ENHLES---VYINQQKLSTIAI----KHQNQDHSSEYLLLEASYTDPISLSLKLHALKDK 334 Query: 351 GIITDSR--YRFERGVD---LQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRK 403 + D+ YR RG + L G+ + H+ +DI ++ + K Sbjct: 335 TLQKDNALIYRSARGSNPNLLDGLNFLSAHL-----------KADILESKQTQHSLKNHA 383 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEI 463 + F ++ + G+ E IL+ LGF+V + EV P++R D++ D+ EEI Sbjct: 384 LTFKVEDIAEILGLVAEKETIQNILKNLGFAVTIKGSDIEVITPNFRHDIKTIQDIAEEI 443 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSFISKE 519 LR G+D + S+PL +N + R+ + L +A+ EVV++ F SKE Sbjct: 444 LRFVGIDHLISKPL---HCVSSKNSNPHYETHRFFEN-LKHKALACGFKEVVHYVFYSKE 499 Query: 520 QSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + G E LE+ NPI+ D++ +RTSL+ GLL A+ RN + A++E VY Sbjct: 500 KQQKLGFEVLEDPLELQNPITTDLNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSVYN 559 Query: 578 NDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 + E QK ++A+G++ S G+ W S C + D + L++ P Sbjct: 560 SKREEIQKLGFLASGLQTKESYPYAKGKAWDFYSFAECVSRIIGDFSLEKLTIQTPI--- 616 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 HP +S I + E V+G + HP ++ L FE Y I Sbjct: 617 ------------NHPYQSAKIIQNHE-VIGVIAKIHPKVIQEMDL------FESYYAEID 657 Query: 696 ISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVF 753 S+ KR ++ S++P RDL I+D++ + +K+ + ++ D+F Sbjct: 658 ASKLKRPTM--LLRPFSIYPSSVRDLTLIIDENTAFSEIKKALKDAQIPNLSEILPLDIF 715 Query: 754 QGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + E ++A+ V +I L+ T D+++ + + R +E + K NA L+ Sbjct: 716 K-----ESNNAIALSVRCVIHSLEKTLNDEEVNLAVQRALEILEKNFNARLK 762 >gi|261884007|ref|ZP_06008046.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 296 Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 104/206 (50%), Positives = 139/206 (67%) Query: 380 ILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY 439 IL C G + + + Y R I F +EVKRL+G+DV ED+ IL+RLGF V G+ Sbjct: 11 ILDDCRGQPTVLDVVGYKLYTARVIDFSVTEVKRLTGLDVSYEDAFDILKRLGFGVEGDG 70 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +VPSWR DVE KADLVEE++RI+G+++I +PLP + R L+ Q RTR+ + Sbjct: 71 KTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLPSHGAVNGRILTTLQIRTRHAR 130 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ADMS+MR SLLPGLL A RN Sbjct: 131 RMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIAADMSDMRPSLLPGLLAAAQRN 190 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQK 585 DR D A+ EVS +YE +P+ Q+ Sbjct: 191 ADRGFDDIALVEVSGIYEGGSPDKQR 216 >gi|158604932|gb|ABW74751.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter concisus 13826] Length = 778 Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 217/837 (25%), Positives = 380/837 (45%), Gaps = 93/837 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M + WL + +D ++VS E + TL SIGLEV+ + V S E++PD D Sbjct: 1 MIISKHWLNEWIDLSEVSGETLSKTLNSIGLEVDSYKEINLPKSVVVGYVKSREKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGA NV G A G+ +P N + + K+RGIES GM+ Sbjct: 61 KLSVCQVDVGS-ETLQIVCGAKNVEAGQFVPVALIGTTMP-NGLEIKKAKLRGIESCGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-----RLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL L + I LP+D +G L ++ D II+V +T NR DC + G Sbjct: 119 CSSTELGLPKTNDGI--LPLDESIGKLKLGTSLGEFEVFKDVIIEVDVTANRGDCQNLHG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSE------------SIPLEIKFDLDDSSLCKGFAMCC 221 IA ++ A ++N+ +E S+ E K ++ S L K F + Sbjct: 177 IAREICTA-----LDLNMKDSHENEDSENLLGIGRIASVRTEDK--VNGSFLYKAFEL-- 227 Query: 222 VKGVRNNVAPNWM-RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRR 280 +N ++ N + R RL + + + + + Y + G +D +++ Sbjct: 228 ----KNALSENLLTRLRLALIDCQKTNLVERLLEYATFCTGVLFRAYDHAKL-------- 275 Query: 281 ACSGEK-ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 GEK + + N E + + VV D + +AGI A D+ + +LVE + Sbjct: 276 VGEGEKAVFDIKNGE---NGECVVFCEDKNL-GVAGIYQSDEARVDEGSKVILVEASYVK 331 Query: 340 PINIARS---GKNLGIITDSRYRFERGVD---LQGMIPVLKHIVSL--ILSLCGGTASDI 391 P ++++ KNL D YR RG + G + K + S LSL G+ + Sbjct: 332 PDVVSKAIFENKNLPK-GDQVYRSSRGSEPNLAYGADYLFKRLASFKDSLSLFAGSQQSL 390 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSW 449 + +P + E+K + G +V D ++IL++LGF +V E + F V VP + Sbjct: 391 -----LNTEPITLSISLGELKNMIGQEVARNDVVKILKKLGFEIAVNVEQESFNVKVPLF 445 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 R D+ D+ EEI+RI G+D I S PL ++ ++R A E Sbjct: 446 RHDIVNSHDICEEIVRIIGIDNIASTPLNFSEKNRLNKTYFDYKNALNLRRRAADNGFFE 505 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 V++ F S ++ +++ILNPI+ +++ +R +L+ LL ++ +N+ + + Sbjct: 506 SVHYVFDSLDELGELNFKPCKIKILNPINNELNTLRPALVNHLLSSSEKNIKNSKRSVRL 565 Query: 570 FEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 FE+ V++ + +G ++ +G+ K + I G+ K EE + + A + Sbjct: 566 FELGEVFDENANQGLNLGFVVSGLLKEPTLINGA------KGEE----ANFYAFAAMVQN 615 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 VI F L R S+ P + + E + GY G + L Sbjct: 616 VIGKF-ELKPCR----EISYLSPYEQAHLYQNGEKI-GYIGRVDARVEAKRDLP------ 663 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 + Y+ I ++ K V + S RDL+ IV ++ AG + I+ ++ + + + Sbjct: 664 KTYVCEIDFAKLKFEPILAVPY-SKFQSTTRDLSLIVPENFEAGRIYECIRELNLKELKE 722 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+++ L G S++++ Q ++ T DDDI LMD+I+ + +K N +R Sbjct: 723 FLPVDIYKDAKLN-GAISLSLKFTFQDMEKTLEDDDINALMDKILNELKEKLNIGIR 778 >gi|213852219|ref|ZP_03381751.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 326 Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 119/328 (36%), Positives = 193/328 (58%), Gaps = 6/328 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMRQR 237 L+E ++ ++ S L I + D+ C + VKG+ N P WM+++ Sbjct: 180 AVLNKAPLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINVNAPTPLWMKEK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L+ G+RSI A+VD+TNYV L+ G P H FD RI + VR A GE ++ LD E L Sbjct: 238 LRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIDGGIVVRMAKEGETVVLLDGSEATL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCD 325 + D +VIA + IAGI GG+H+G + Sbjct: 298 NADTLVIADHHKALGIAGIFGGEHSGVN 325 >gi|315636543|ref|ZP_07891779.1| phenylalanyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] gi|315479192|gb|EFU69889.1| phenylalanyl-tRNA synthetase beta subunit [Arcobacter butzleri JV22] Length = 774 Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 211/834 (25%), Positives = 378/834 (45%), Gaps = 91/834 (10%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL++ ++ +++S + IC TL +IGLEV+ +++ + S + KVL E++PD D Sbjct: 1 MIITRSWLEEFINISNISTKDICKTLNAIGLEVDSLESFDIASKVVVGKVLEKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA NV G A G C N+ I+ K+RG+ES GM+ Sbjct: 61 KLNVCQVDLG-DKTVQIVCGASNVDAGQFVAVATIG-CDLGNDFIIKEAKLRGVESNGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L + IM L + +G L DY L+D II++ LTPNR DC+ + GIA Sbjct: 119 CSSTELGLPKLNDGIMVLDNSIGELVLGKELRDYNRLNDDIIEIGLTPNRGDCLSIYGIA 178 Query: 176 LDLVA-----------------AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFA 218 +L A +G+L EIN ++++ I F F Sbjct: 179 RELSAFYDIDLIEQDKQISYSEFSIGQLLEINCDSHINADLTYRAIDF--------SNFK 230 Query: 219 MCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTV 278 + + +R + + DI N ++ Y +H I + T Sbjct: 231 LSLINRLRTAIIGKYENSN-------------DIKNILT----YTTHAMGV--ILNAYTK 271 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD-DNTTDVLVEVAL 337 +A ++ LD ++ + D + + ++ +I +H D N +D +VE + Sbjct: 272 EKAIKNGELYILDVKKDENGFD--AVYGNEKLSTIC----VEHKEIDVSNISDFIVEASY 325 Query: 338 WDPINIARSGKNLGIIT-DSRYRFERGV--DLQGMIPVLKHIVSLILSLCGGTASDICIA 394 +P I++ I T + Y+ RG D++ + +S + +L + Sbjct: 326 INPDLISKRVYEKKIKTGEIYYKATRGSEPDIEFGMNYFSSYISKLGALIYKGNENF--- 382 Query: 395 RNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQD 452 I K + + +N +V + G + + RIL LGF V D V +P +R D Sbjct: 383 --IEDKEKASIDVNVHKVNSIIGQTINKFEIERILVSLGFEVKESIDDILIVKIPHFRHD 440 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 ++ AD+ EEI+RI G+D I S+PL + +V S + ++ E + Sbjct: 441 IKNIADITEEIVRIIGIDNIISKPLEIDEVNRVNKTSKDLIKKNKLRFKAIENGFFETLT 500 Query: 513 WSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + F SKE Q F + +LE++NPI +++ RT++L L++A N A F Sbjct: 501 YVFASKEDLQKYGFKTVKDDLELINPIVKELNTYRTTILLNLVEACSNNFKTGSRSTAFF 560 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 E+ +++ + E +K A I+ G+ +E K+ +D F L+ I Sbjct: 561 EIGTIFDENRNESKK--IAFIQTGAMELEDISNTGKPKN------IDFFAFAKKILNTIG 612 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 F D + S+ HP ++ + + V GY + HP++ F L++ E+ Sbjct: 613 KF---DLEPMSEISNSFIHPYQNANVFIDGKNV-GYICKLHPSVCLDFDLNDTFVA-EID 667 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTV 749 +++ + + K S K+DL+ I + + + I +++ I + Sbjct: 668 FEAV------KDELLKTSSYSKFQSSKKDLSIIAPKSLKYKEIKKAINSLNNPNIKQYNL 721 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++ + LGE +S+ I+ ++Q + T +DDI +++ I+E + +K + LR Sbjct: 722 IDIYSDEKLGEN-ESLTIRFVLQSDEKTLEEDDINSIINSILEVLKQKLSIGLR 774 >gi|163791708|ref|ZP_02186100.1| phenylalanyl-tRNA synthetase beta subunit [Carnobacterium sp. AT7] gi|159873020|gb|EDP67132.1| phenylalanyl-tRNA synthetase beta subunit [Carnobacterium sp. AT7] Length = 441 Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 138/447 (30%), Positives = 234/447 (52%), Gaps = 23/447 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M + WLK++LD ++V+ E + D ++ G+E+E V E L + + V +PD Sbjct: 1 MNVSYQWLKEYLDLSNVTPEALADKMSRTGIEIEDVAIPETGLKKIVVGHAVEVVNHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D I ++D G+ + Q+VCGAPN+ G + A PGS I N I K+RG S GM Sbjct: 61 DHLHICQVDIGEEELSQIVCGAPNIAAGQKIIVALPGSRITGNAKIKK-GKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EL S+ + I LP A G + YL + D I+++S+TPNR+D + + Sbjct: 120 VCSLAELGFSEKVVPKKYADGIYILPEHAVPGEPVFPYLAMDDAILELSITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPL------SSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 RG+A ++ G + + P ++S+ IK +++S + + VK V Sbjct: 180 RGVAHEV-----GAIYDQQPKFPSFELTEDKTDSVANYIKVAVENSEDAPSYNVRIVKDV 234 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSG 284 + +P W++ +L G+R ++ +VDITNY+ L+ G P H FD ++ S + VR A G Sbjct: 235 KVAESPMWLQTKLMNAGIRPLNNVVDITNYILLEYGQPLHAFDYDQLQSKEILVRHATDG 294 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 E + LD E L+ +++VI + ++AG +GG + +D T V +E A++D I+I Sbjct: 295 EALTTLDGVERSLTSEDIVITNGAIPVALAGTMGGLDSEIEDRTVTVAIEAAVFDAISIR 354 Query: 345 RSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 ++ K + ++S RFE+G++L + H +L+ L GGT +++I K+ Sbjct: 355 KTAKKYNLRSESSSRFEKGINLATITTAGDHAAALMAELAGGTVVAGVASQSILAVQDKV 414 Query: 405 VFMNSE-VKRLSGIDVPIEDSLRILER 430 V + E + R G + E+ I +R Sbjct: 415 VTITLEKINRSLGTSITTEEVTAIFDR 441 >gi|194246480|ref|YP_002004119.1| Phenylalanyl-tRNA synthetase beta chain [Candidatus Phytoplasma mali] gi|193806837|emb|CAP18266.1| Phenylalanyl-tRNA synthetase beta chain [Candidatus Phytoplasma mali] Length = 803 Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 193/788 (24%), Positives = 358/788 (45%), Gaps = 61/788 (7%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVW 90 EVEK I K+L+ E+ + L H+ + ++C N+ +G + Sbjct: 29 EVEKFYFLTKNHNLIIGKILNFEKIINSKYLYLVTVDIAHKLLNIICSYNNLIIGKKVIV 88 Query: 91 APPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP--------IDAPV 142 A GS + + +KI+ I S GM+CS EL +S+ + E +D + Sbjct: 89 AQEGSYLEGLKSFIKTKKIQNINSDGMLCSLTELGISNQYLTSTEKKGIYYFSDDVDLEL 148 Query: 143 GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIP- 201 G + +L L ++++SLTP+R D G DL A K + + ++ I Sbjct: 149 GSDVLKFLSLKGFMLELSLTPDRVDLYSHIGFIKDLNAVSKQKNDFLEQQLIVKNQEISK 208 Query: 202 ---LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSL 258 +IK + D C + + ++ + +P W+R L + ++ LVDI N + + Sbjct: 209 LNYFQIKIENKD---CYEYNVRYIENITIKTSPLWIRNILLKADILPVNNLVDIANLILI 265 Query: 259 DRGYPSHVFDASR-ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 + G P H FDA + I+ + VR A EKI +DN+EY L+ +++VIA+D +AGII Sbjct: 266 EYGVPIHFFDADKLINSSIIVRNANLNEKITTIDNKEYVLNSEDLVIANDNIPIELAGII 325 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 + D NT ++++ A ++P I+++ K L + T+ +ERG+D ++ L+ Sbjct: 326 SLNNNNIDLNTKNIILTTAYFEPKIISKTSKKLKLSTNISLYYERGIDQTLIVKALERAC 385 Query: 378 SLILSLCGGTASDICIARNITYKPR-KIVFMNSEVKRLSGIDV---PIEDSLRILER--- 430 L+ + + +++ I + KI + ++ +GI+ IE L++LE Sbjct: 386 QLLQEITNAKITKNIVSKKIKLRKNPKITLSLNFIRNKTGINFLWSQIEKFLKLLEYKII 445 Query: 431 --LGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPLTQVEDKR 486 + V + ++ F V+ P R DV D++ ++LR+YG + + L V K Sbjct: 446 IDINSFVFNDLNQVFYVTAPLRRYDVNIPEDVISDLLRMYGYHNVYVNNDNILNTVTFK- 504 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT 546 +++Q++ R ++ +L + E++ +S +S + S LF + ++++LNP+S D +R Sbjct: 505 --TIKQNKIRNLRYLLQNIGFCEIITYSLVSDKISQLFPYNKNKVKLLNPLSQDKIILRQ 562 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY-MAAGIRKGSSGIEGSGRLW 605 +L+ ++ N R D A FE+ VY PE + +A G+ S SG W Sbjct: 563 NLIASFIEVLSYNQKRNNVDNAFFEIGKVY---FPESEYLNLALGL---SGNFINSG--W 614 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH---PG-RSGIIKTSAE 661 + FV ++E + + + YH PG ++ II + + Sbjct: 615 HKNNINSSFFV--------LKGILERIAFFLKINLQLKKTNIYHSFCPGIQANIIFNNQK 666 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 I G+ GE + I + L+ E+ L+ ++Q +++ S ++RDL+ Sbjct: 667 I--GFMGETNCFINKQYQLTKSYL-LEISLNDEILNQNTVNHYQEI---SKFPSIRRDLS 720 Query: 722 FIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK---DT 777 FI+D+ + IK + L + DV+ L + S+ I + L + Sbjct: 721 FIIDKKYDFSDISKTIKEFISILFFKFELLDVYYSDKLFSHQYSLTIGFIFNDLDGNLNK 780 Query: 778 FRDDDIRI 785 + DDI I Sbjct: 781 IKVDDIMI 788 >gi|296272031|ref|YP_003654662.1| phenylalanyl-tRNA synthetase subunit beta [Arcobacter nitrofigilis DSM 7299] gi|296096206|gb|ADG92156.1| phenylalanyl-tRNA synthetase, beta subunit [Arcobacter nitrofigilis DSM 7299] Length = 772 Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 206/833 (24%), Positives = 374/833 (44%), Gaps = 113/833 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL+D +D + + + IC L SIGLEV+ ++ S I V S E++PD D Sbjct: 1 MIVTKRWLEDFIDISKIDINDICKKLNSIGLEVDSLEKIRIPSGVVIGYVESKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +++ G ++ Q+VCGA NV G A G C+ + + K+RG+ES GM+ Sbjct: 61 KLSVCQVNIG-NEVTQIVCGAKNVAAGQYVPVATVG-CVLGTDFKIKKAKLRGLESNGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS E+ L + I+EL + +G L++Y ++D IID+ LT NR DC+ + G+A Sbjct: 119 CSSTEIGLPKLNDGILELDDSIGELIIGKELNEYRLINDDIIDIELTANRGDCLSIHGVA 178 Query: 176 LDLVAA-----------------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFA 218 +L G+G+L EI +SS I + D + K Sbjct: 179 RELSVCYGVTLCEQEKNLEYNDIGIGQLLEIESDSTISSSLI-----YKAGDFTELK--- 230 Query: 219 MCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF---DASRISD- 274 P + R+ + L L +I +Y + G + + D ++D Sbjct: 231 -----------VPILYKLRVATINLYKDCDLENILSYATHATGVTMYAYAKVDCDTLNDL 279 Query: 275 -VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 VL ++++ G +D + ++ +I+ K+ + + T ++ Sbjct: 280 SVLHIKKSKDG----------FD------EVYGKEKLSTISI----KNEAINKDDTTYIL 319 Query: 334 EVALWDPINIARSGKNLGIIT-DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 E + +P ++++ + I T D Y+ RG + P ++ + +L + + Sbjct: 320 EASYNNPEELSKNVFDKKIKTGDVYYKTSRGSE-----PNIESGMEYFTTLISKFGAKLY 374 Query: 393 IARNITYKPRKIVFMNSEVKRLSGI------DVPIEDSLRILERLGFSVI-GEYDKFEVS 445 + + ++ + ++ +KR+S I V IE +IL LGF+V G V Sbjct: 375 RGYEVFTEDKERLSIDVSIKRVSSIVGKTFTKVKIE---KILSGLGFTVKDGGSGVLSVQ 431 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 VP +R D++ AD+ EEI+RI G+D I+S PL + +V S + ++ ++ Sbjct: 432 VPLFRHDIKNIADITEEIVRIVGIDNIESNPLQIEEVNRLNETSNKITKKNKIRAKAIEN 491 Query: 506 AMMEVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 E +++ F SKE + +L++LNPI +++ +RT++L L++A N + Sbjct: 492 GFFETLSYVFTSKETLEKYNLETVNEKLDVLNPIVNELNTLRTTMLTNLIEACSNNFKQG 551 Query: 564 IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 A FE+ V++ E QK + I G S E ++ F A Sbjct: 552 FKKVAFFEIGTVFDTQRNESQK--ISFIFSGDSEYES---FTNNGKPANIEFFGFAKKVA 606 Query: 624 DALSV--IEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGL 680 +A+ +EP +++L HP ++ II + +I G+ + HPN+ + + L Sbjct: 607 NAIGRFDLEPMNEINNL--------LIHPYQNANIIVDNKKI--GFISKLHPNVANDYDL 656 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 + ++ I +K + K S KRDL+ IV + I + N+I ++ Sbjct: 657 P------DTFIAEIDF-EKIKNNLIKANEYSKFQASKRDLSLIVPKDISYSRIRNVINSI 709 Query: 741 -DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 D I + D + + LG+ K+S+ I+ ++Q T +D I M+ I+E Sbjct: 710 EDATIQQFNLVDTYSDEKLGD-KESLTIRFVLQSFDKTLEEDHINATMNTILE 761 >gi|206895937|ref|YP_002246957.1| phenylalanyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] gi|206738554|gb|ACI17632.1| phenylalanyl-tRNA synthetase, beta subunit [Coprothermobacter proteolyticus DSM 5265] Length = 797 Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 181/683 (26%), Positives = 320/683 (46%), Gaps = 77/683 (11%) Query: 144 GRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE 203 G L + LEL D +I +S+ PNR D + G+A + +A G+G + + P + Sbjct: 153 GPLKEVLELPDMLIKLSVLPNRGDLSHLFGLARE-IACGMG----LTLVVPTFQHKLEKR 207 Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 + C + ++ +R +P W++ L G R I+ +VD+TNY + G P Sbjct: 208 NGLVSIQTDGCLVYVGMLLENLRVEESPWWLKLELMRFGQRCINNVVDLTNYFLFNYGQP 267 Query: 264 SHVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHA 322 H FD ++D + VR+A GEK++ L+N+E L D +VIA + +AG++GG+ A Sbjct: 268 MHAFDFDTLTDHRIVVRQAKPGEKLVLLNNEEVTLDEDCMVIADAVKPVGVAGVMGGRDA 327 Query: 323 GCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILS 382 T VL+EVA + P ++A S + LG+ TD+ +ERGV G + + + Sbjct: 328 SVSSQTKRVLLEVAAFAPSSVAMSSRKLGVRTDASMLYERGVAPFGQVDMALLFADFVEQ 387 Query: 383 LCGGTASDICIA------RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI 436 + A+ + A R + Y P++IV ++S V +D + ++ + VI Sbjct: 388 MGCAQATALWFAGEERRYRLVDYNPQRIVKLSS---------VKDQDLVDMISTKQWEVI 438 Query: 437 GEY----DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL----PLTQVED--KR 486 E K ++ +P++R D+ DLV+E+++ G D+I S PL P + E K Sbjct: 439 TEEGNNDGKKKIRIPAYRWDITRTEDLVDELVKFVGYDRIPSLPLMDYIPFREKESITKE 498 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT 546 N L+++ + Y + V M+ +++ + + + + L + NP+S +++ +R Sbjct: 499 N-KLREASSLYFQEVF----MVSLISDKDVQNISAHMGIDAKNVLAVDNPVSRELAYLRP 553 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEG 600 +LL L+KA N +R D +FE+ V+ N T ++ A + KG Sbjct: 554 NLLISLIKAALLNQNRFHDDVHLFEIGSVFTRVSKDANSTEVEERRHIAYLSKGLYWENA 613 Query: 601 SGR-LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 + LWS + AL I SL +L +E+ SW SGIIK Sbjct: 614 LDKDLWS------------YREFKGALENIFERCSL-TLGWENAFVSWAESQFSGIIKYE 660 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-- 717 V G G P++L + L P+ E+ LD +P+ V + P+K Sbjct: 661 GREV-GQVGMLKPSLLKAYDLKGPVFAAELDLDVLPL----------VTGREPVFPLKFP 709 Query: 718 ---RDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 RDL+ ++ +P L + + + L+ D V D+++G+ L +KSV ++V + Sbjct: 710 QSWRDLSVVMPVEVPVSELAKLFEG-EPLVKDWKVVDLYRGEKLSPSEKSVTVRVWLGAE 768 Query: 775 KDTFRDDDIRILMDRIVENVVKK 797 T +++ D++VE V+ + Sbjct: 769 DHTVSSEEV----DQVVERVLGR 787 >gi|320101723|ref|YP_004177314.1| phenylalanyl-tRNA synthetase subunit beta [Isosphaera pallida ATCC 43644] gi|319749005|gb|ADV60765.1| phenylalanyl-tRNA synthetase, beta subunit [Isosphaera pallida ATCC 43644] Length = 691 Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 175/667 (26%), Positives = 307/667 (46%), Gaps = 62/667 (9%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEI--NISCPLSSESIPLEIKFDLDDS 211 D ID+ +T NRSDC+G GIA + +AA GK + + + P+ + + + Sbjct: 41 DLAIDLEVTSNRSDCLGHLGIARE-IAAVFGKPPVVMPDPNPPVGGPDVASLAAVENHEP 99 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 LC F + GVR +P W+ +RLK +G S++ +VD+TNYV +RG P H +D R Sbjct: 100 DLCPRFTARLLTGVRVGPSPWWLVRRLKTLGQDSVNNVVDLTNYVLYERGQPLHAYDFDR 159 Query: 272 ISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 + L VRRA +GEK+ ALD EY L+PD +VIA R ++AG++GG G +T + Sbjct: 160 LEGRRLIVRRASAGEKLHALDKTEYSLTPDMLVIADAQRPVALAGVMGGLATGIQHDTVN 219 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD 390 VL+E A + P+ + ++ + LG+ + S +RFER +D + + + LIL + GG Sbjct: 220 VLLESAAFHPLTVRKTARALGLSSASSFRFERPIDPEAVDWASRRCAELILEVAGGQLHP 279 Query: 391 --ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSV 446 + + ++++R+ GI + + + ILE LG + E + Sbjct: 280 GVLDTRPQPIPPRPPVTLRLAQIERVLGITLDRDRVIGILEALGIPLCSQPEAEPLVFQP 339 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSE---PLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 PSWR DV+ + DL+EE+ RI+G +QI + P+ ++ + + V+ L Sbjct: 340 PSWRLDVDREIDLIEEVARIHGYEQIPEDRVVPMACSRRSPRERVE------STVRETLT 393 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRE-LEILNPISADMSN------MRTSLLPGLLKAT 556 + E +S +S+ L Q + + + P+ + S+ +R SL+P LL+A Sbjct: 394 ALGFDEAYTFSLVSER---LIAPLQPDSIAVQPPLRTEHSSRSRENLLRPSLVPSLLQAR 450 Query: 557 GRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 N + D +FE++HV+ ++ P +A G S +E G Sbjct: 451 RHNEAHGVTDADLFEIAHVFLPRAGHEVPLELPRLA--WVTGRSFLEAKG---------- 498 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 C +A L + P + R + GR+ ++ + LG+ GE Sbjct: 499 C-----VEALLRRLHIDAPLTATPVRR------DLFAEGRAAVLTLEGDH-LGFLGELSE 546 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAG 731 D L E+ L+ + +R++T V P ++R+L+ +V + + Sbjct: 547 AWRDRLDLRKVCRAVELELECL----IRRSQTTAVYRPIPTTPSIERELSIMVPRDLEWA 602 Query: 732 TLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + ++ L+ +T D F+ + L + + + TF+D + R L Sbjct: 603 RVQEAVREAGGPLLTAITFLDTFESEQLERYRGGLEGPIHSLHFGMTFQDPE-RTLTGAE 661 Query: 791 VENVVKK 797 V+ VV + Sbjct: 662 VDEVVAR 668 >gi|294628439|ref|ZP_06706999.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. e14] gi|292831772|gb|EFF90121.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces sp. e14] Length = 446 Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 139/407 (34%), Positives = 219/407 (53%), Gaps = 26/407 (6%) Query: 1 MKFTLSWLKDHLDTDVSL--EKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVE--- 53 M+ LSWL++++D + + L S GLEVE V+ A P + +VL++E Sbjct: 2 MRVPLSWLREYVDLPATETGRDVQAKLISAGLEVETVEQLGADLKGPLVVGQVLTIEELE 61 Query: 54 --RNPDLDCAI---LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 + P C + TG+ QEI VCGA N VG V PG+ +P ++ RK Sbjct: 62 GFKKPIRFCTVDVGRANGTGEPQEI--VCGARNFSVGDKVVVVLPGATLP-GGFSISARK 118 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS +EL + DD + I+ LP + VG + L+L D ++D+++TP+R Sbjct: 119 TYGKTSHGMICSAEELGMGDDGTHGIIVLPPEHEVGTDAIELLQLVDEVLDIAVTPDRGY 178 Query: 168 CIGVRGIALDL-VAAGLGKLKEINISCPL-SSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 C+ +RG+A + +A G L + P ++ P+++ D C F V G+ Sbjct: 179 CLSLRGVAREAAIAYGRPLLDPALLDVPAPNAYGHPVKVS----DPFGCDRFTARTVTGL 234 Query: 226 RNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 +P W+++RL+ G+R IS VDITNYV L+ G P H +D +R+ + VRRA G Sbjct: 235 DPEARSPIWLQRRLQKAGMRPISLAVDITNYVMLELGQPLHAYDRTRVQGAIGVRRAERG 294 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD---NTTDVLVEVALWDPI 341 E++ LD LS +++VI + +AG++GG + DD TT+V++E A +DP+ Sbjct: 295 EQLTTLDGVTRTLSTEDLVITDERGPIGLAGVMGGANTEIDDTEGTTTEVVIEAAHFDPV 354 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 355 AIARTARRHKLSSEASRRFERGVDPQAASAAAQRTVDLLVLLAGGTA 401 >gi|302550246|ref|ZP_07302588.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] gi|302467864|gb|EFL30957.1| phenylalanyl-tRNA synthetase, beta subunit [Streptomyces viridochromogenes DSM 40736] Length = 528 Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 143/412 (34%), Positives = 222/412 (53%), Gaps = 33/412 (8%) Query: 1 MKFTLSWLKDHLDTDV--SLEKICDTLTSIGLEVEKVDNREA--LSPFTIVKVLSVERNP 56 M+ LSWL++++D S + D L S GLEVE V+ A P + +V ++E Sbjct: 1 MRVPLSWLREYVDLPATESGRDVQDKLVSAGLEVETVEQLGADLKGPLVVGQVATIEELT 60 Query: 57 DLDCAI--LRID------TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK 108 D I +D TG+ QEI +CGA N VG V A PG+ +P + I RK Sbjct: 61 DFKKPIRFCTVDVGQANGTGEPQEI--ICGARNFAVGDKVVVALPGAVLPGDFQIAE-RK 117 Query: 109 IRGIESTGMMCSEKELMLSDD-SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 G S GM+CS EL + DD + I+ LP + +G + LEL D ++D+++TP+R Sbjct: 118 TYGRMSRGMICSSDELNMGDDGTKGIIVLPPETEIGKDAVELLELVDEVLDIAVTPDRGY 177 Query: 168 CIGVRGIALDL-VAAGLGKLKE---INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVK 223 C+ +RG+A + +A GL L++ I++ P ++ P++I D + C F V Sbjct: 178 CLSMRGVAREAAIAYGL-PLRDPALIDVPGP-NAYGYPVQIA----DPTGCDRFTARTVT 231 Query: 224 GVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 G+ +P W+++RL+ VG+R IS VD+TNYV ++ G P H +D + + VRRA Sbjct: 232 GLSAEARSPIWLQRRLQKVGMRPISLAVDVTNYVMMELGQPLHAYDRGLVQGTIGVRRAE 291 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK------HAGCDDNTTDVLVEVA 336 GEK+ LD E L +++VI D +AG++GG H ++ T DV++E A Sbjct: 292 QGEKLTTLDGVERTLDAEDLVITDDRGPIGLAGVMGGANTEIADHDDVENATADVVIEAA 351 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA 388 +D +IAR+ + + +++ RFERGVD Q + V L++ L GGTA Sbjct: 352 HFDATSIARTARRHKLSSEASRRFERGVDPQAAAAAAQRTVDLLVLLAGGTA 403 >gi|77414999|ref|ZP_00791082.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] gi|77158950|gb|EAO70178.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] Length = 365 Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 129/372 (34%), Positives = 212/372 (56%), Gaps = 20/372 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + ++S E PD Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPAEGLSKLVVGHIVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++DTG + QVVCGAPNV+ G+ + A PG+ I +N I KIRG+ES GM+C Sbjct: 61 LHLCQVDTGDDELRQVVCGAPNVKTGINVIVAVPGARIADNYKIKK-GKIRGMESLGMIC 119 Query: 120 SEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL LS+ S I LP A G + YL+L D II++S+TPNR+D + +RG Sbjct: 120 SLQELGLSESIIPKEFSDGIQILPEGAIPGDSIFSYLDLDDEIIELSITPNRADALSMRG 179 Query: 174 IALDLVAAGLGK---LKEINI--SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 +A + VAA GK +E N+ +++ I + I+ D ++ VK V Sbjct: 180 VAHE-VAAIYGKKVHFEEKNLIEEAERAADKISVVIESDK-----VLSYSARIVKNVTVA 233 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKI 287 +P W++ +L G+R I+ +VD+TNYV L G P H FD + + R A +GEK+ Sbjct: 234 PSPQWLQNKLMNAGIRPINNVVDVTNYVLLTYGQPMHAFDFDKFDGTTIVARNAENGEKL 293 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + LD +E DL D++VIA + + ++AG++GG+ ++ V++E A+++ +I ++ Sbjct: 294 ITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTEIGSSSKTVVLEAAVFNGTSIRKTS 353 Query: 348 KNLGIITDSRYR 359 L + ++S R Sbjct: 354 GRLNLRSESSSR 365 >gi|325141977|gb|EGC64414.1| Phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis 961-5945] Length = 283 Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 118/287 (41%), Positives = 173/287 (60%), Gaps = 11/287 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G +Q+VCGAPNV+ G+ + PG+ +P N + K+RG+ S GM+ Sbjct: 61 RLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLP-GNFKIKPTKMRGVVSDGML 119 Query: 119 CSEKELMLSDDSASIME-LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 CS EL L DD + + LP DAPVG + +YL+L D + + +TPNR+DC+ ++GIA + Sbjct: 120 CSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFTLKITPNRADCLSIKGIARE 179 Query: 178 LVA-AGLG-KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWM 234 + A G + EI+ + S P++I D C F ++ V A P+WM Sbjct: 180 VSALTGCAFRQPEIHTAPITGSRKQPVQINAPAD----CGRFISRVIENVNAKAATPDWM 235 Query: 235 RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 +QRL+ G+RSISALVDI NYV L+ G P HVFDA ++S L +RRA Sbjct: 236 KQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGSLHIRRA 282 >gi|291276295|ref|YP_003516067.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter mustelae 12198] gi|290963489|emb|CBG39319.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter mustelae 12198] Length = 782 Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 219/820 (26%), Positives = 372/820 (45%), Gaps = 80/820 (9%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGK 69 HLD +++IC L +IGLEVE + + + KVL +PD D ++ ++D GK Sbjct: 16 HLD----IQEICKVLDNIGLEVESLTRVQMPRNVVVGKVLEKNPHPDADKLSVCQVDVGK 71 Query: 70 HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV--RKIRGIESTGMMCSEKELMLS 127 + +Q+VCGA NV A G+ + + ++ + K+RG+ S GM+CS EL L Sbjct: 72 -ECLQIVCGAKNVDTDQFVAVALKGARLEFDGRVLEIGESKLRGVNSYGMLCSSTELGLG 130 Query: 128 DDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAG 182 + IM L D +G GR L DY +++SLTPNR DC+ V GIA +L A Sbjct: 131 KINEGIMLL--DHSIGELDLGRELCDYESFQGYNLEISLTPNRGDCLCVLGIARELKAYF 188 Query: 183 LGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVG 242 KLK+ +S+ I + KF + + V + P + L G Sbjct: 189 GLKLKKSREY--MSTNQIGVGRKFQVAMENKISASLFYKVVDFESKTLPLKLGLALANAG 246 Query: 243 LRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV 302 + L + Y++ G + ++A + + +IL L +E + + Sbjct: 247 ILKKGILENYLAYITYMTGVILNAYEADALR-----KDQNQANEILWLHVREDEKGFE-- 299 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR---SGKNLGIITDSRYR 359 I ++ R+ +I GI H D T ++ E + P I++ + K+ + Y+ Sbjct: 300 TIYAEERLSNI-GIGNVIHQDIDHAKT-IVFEASYIPPTKISKLLHTYKDFPHDKELVYK 357 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-----YKPRKIVFMNSEVKRL 414 RG + P L H+ L L G +D I + P I S + + Sbjct: 358 TTRGSN-----PDL-HMGMNYLCLLLGAHNDCFIYNGMQEVKQDAAPNIIRTQFSNISSI 411 Query: 415 SGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G ++ E IL+RL F V D F + VP +R DV + DL EEILRIYGVD+I Sbjct: 412 IGAEIDGEIMSEILKRLDFYLEVKANDDSFSIVVPGYRHDVFTEQDLAEEILRIYGVDKI 471 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTR-YVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQR 529 + P ++++ + R + R LA+ +E +++ F KE ++ F + Sbjct: 472 PAVPHKMSEISKITPVCTTYKNQRALISRALAN-GFLECIHYLFYQKERLHALGFPTLRE 530 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--YM 587 E E+LNPI+++++ +RTSLLP LL + RN + + + E+ VY+ + E K ++ Sbjct: 531 EKELLNPITSELNTLRTSLLPALLDSVARNQNYGYRNIKLCEIGSVYDRERTESTKIAFV 590 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 +G +G G W F A +S I +L + P Sbjct: 591 VSGCLEGEIFPHPKGVKWD------------FYTFARVISQIMGEFTLQ--KSSQALPHV 636 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEV--YLDSIPISQKKRTKT 704 +HP +S + + LG + HP+I + N IC +V +L P+ Sbjct: 637 FHPYQSAEVLRDGK-KLGIIAKLHPSIAKELEIQNAFICELDVDAFLLEHPLFSP----- 690 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKK 763 S L +RDL ++D+ I G + +++ + L + ++ D+F S E + Sbjct: 691 -----FSKLPTSQRDLTVLIDRDIAFGNIRDVLMSARILHLKNLYPMDIF---SENETQI 742 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++I+V I PL++ R++DI+ +M +I+E + + A L+ Sbjct: 743 ALSIRVEIVPLENNLREEDIQAIMQKILEILEENFGAKLK 782 >gi|109947062|ref|YP_664290.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter acinonychis str. Sheeba] gi|109714283|emb|CAJ99291.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter acinonychis str. Sheeba] Length = 763 Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 215/833 (25%), Positives = 390/833 (46%), Gaps = 101/833 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MK +++ L ++T ++ K+C+ L+ +GLEVE + A + KVL + + + Sbjct: 1 MKLSVNDLNVFVNTPKNITKLCENLSCLGLEVEGCVSCVAPKNVVVGKVLEKASHKNAEK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ ++D GK + +Q+VCGA NV A G+ I ++ + +IRG+ES GM+C Sbjct: 61 LSVCQVDIGK-EVLQIVCGAKNVAQDQFVPVALNGAII--SSTTIAPTEIRGVESHGMIC 117 Query: 120 SEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 S EL + I+EL + VG LS+Y + ++++SLTPNR DC+ V G+A Sbjct: 118 SSAELGFPKINDGILELDESVGELVVGKELSEYAPFNTHVLEISLTPNRGDCLSVLGVAR 177 Query: 177 DLVA---AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 ++ A A L +K +N + S+SI L+I D ++ A + N+ Sbjct: 178 EISAFYRAPLKPIKALNFT--QKSDSIVLDI-----DENIQSHLAYYLI---HNHSLKTP 227 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI-LALDN 292 + +L ++S D+ N++ + + I ++ + I L++ N Sbjct: 228 LNIKLSLAHNNALSE-NDLKNFIEFSMHF------SGVIMNIYYLNAYSLNTPIDLSVKN 280 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L V + ++ +IA KH D+ + +L+E + DPI+++ + KN Sbjct: 281 DENNLES---VYINHQKLSTIAI----KHQNQDNLSEYLLLEASYTDPISLSLRLHALKN 333 Query: 350 LGIITDSR--YRFERGVD---LQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPR 402 + D+ YR RG + L G+ + H+ + IL ++ Y K Sbjct: 334 KTLQKDNALIYRSTRGSNPNLLDGLNFLSTHLKTAILE-----------SKQTKYSLKNH 382 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 + F ++ + G+ + E +L+ LGF V + EV P++R D++ D+ EE Sbjct: 383 ALTFKVEDIAEILGLVIEEETIQSVLKNLGFEVKIKGSNIEVITPNFRHDIKTIQDIAEE 442 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSFISK 518 ILR G+D + S+PL +N + R+ + L +A+ EV+++ F SK Sbjct: 443 ILRFLGIDNLISKPL---HCVSSKNSNPHYETHRFFEN-LKHKALACGFKEVIHYVFYSK 498 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E VY Sbjct: 499 EKQQKLGFEILEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSVY 558 Query: 577 ENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + E QK ++A+G++ S G+ W F + A+ +S I S Sbjct: 559 NSKREEIQKLGFLASGLQTKESYPYAKGKAWD------------FYSFAECVSKIVGDFS 606 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 L+ L ++ P HP +S I + E V+G + HP ++ L E Y I Sbjct: 607 LEKL--DTKTP-INHPYQSAKIIQNNE-VIGVIAKIHPKVIQELDL------LESYYAEI 656 Query: 695 PISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDV 752 S+ K ++ S++P RDL I+D+ + +K+ + ++ D+ Sbjct: 657 DASKLKHPTM--LLKPFSIYPSSVRDLTLIIDEDTAFNKIKKALKDAQIPNLSEILPLDI 714 Query: 753 FQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 F+ E ++A+ V +I L+ T D+++ + + R++E + K N L+ Sbjct: 715 FK-----ENNNAIALSVRCMIHSLEKTLNDEEVNLAVQRVLEILEKNFNVRLK 762 >gi|32265526|ref|NP_859558.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter hepaticus ATCC 51449] gi|81666610|sp|Q7VK65|SYFB_HELHP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|32261574|gb|AAP76624.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter hepaticus ATCC 51449] Length = 801 Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 220/857 (25%), Positives = 387/857 (45%), Gaps = 114/857 (13%) Query: 2 KFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 K LS D HLD +E++C L+S+GLEVE + + K+LS+ +PD D Sbjct: 5 KHLLSHFVDISHLD----IEQMCMRLSSMGLEVESAYPLKMPQKVVVGKILSLTPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN---MIVNVRKIRGIEST 115 + ++ G QE+Q+VCGA NV+ A G+ IP +++ +RGIES Sbjct: 61 KLNVCKVSIGS-QELQIVCGANNVKANQYVAVALEGAVIPHTKSGEIVIKQTNLRGIESC 119 Query: 116 GMMCSEKELMLSDDSASIMELPIDA---PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 GM+CS EL L + IM L A +G L + +D +I+V +TPNR DC+ V Sbjct: 120 GMLCSSVELGLPKINDGIMVLDSTAGHLELGVELGNLPLFNDYVIEVGITPNRGDCLSVL 179 Query: 173 GIALDL-----------------VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 GIA +L V GLG++ + I C E+ L ++ + L Sbjct: 180 GIARELATSYDLRLKHEVDMDNVVTLGLGRV--LQILCDEKIEAHLLYRVVEVKQAYLPL 237 Query: 216 GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVD--ITNYVSLDRGYPSHVFDASRIS 273 A+C + +LVD + N++ + +A ++ Sbjct: 238 DIALCLARN----------------------GSLVDDIMCNFLEYGTYMTGVILNAYKLY 275 Query: 274 DVLTVRRACSGEKILALDN---QEYDLSPDNVVIASDGRIQ--SIAGI-IGGKHAGCDDN 327 D C + I+ LDN + + D + + Q SI G+ G +H G Sbjct: 276 D-------CENKDIV-LDNGLVAQLRIKKDENGLGAVFAHQKLSIIGVSYGERHFGTRSE 327 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSR--YRFERGVD---LQGMIPVLKHIVSLILS 382 ++E + +P IA+S I D + YR RG + QG+ + + +V + + Sbjct: 328 I--YIIEASYVNPTLIAKSLYKHAIKGDVQLTYRSTRGSNPNLEQGIDFLCRKMVLVSDA 385 Query: 383 LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK- 441 L + +I +NI K F + ++ GI++ E+ IL+RL F + D+ Sbjct: 386 LVYSGSHNI--VQNIDEITIKTTF--KAINQIIGIELDKEEIATILKRLNFKLDATCDEN 441 Query: 442 -FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 F V+VP++R D++ D+ EE+LRIYG+D + S PL +Q + N TR + Sbjct: 442 FFMVTVPNYRHDIQSIQDVAEEVLRIYGIDNVSSVPLLCSQSHNINNTYFTYKNTRKLAY 501 Query: 501 VLASRAMMEVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 L + +E +++ F S + + + F +LE+LNPI+ ++ +RTSLLP +L + R Sbjct: 502 GLIAYGFVECIHYVFASSQNLERLGFVRLDEDLELLNPITNELDTLRTSLLPAMLDSVKR 561 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSE----ER 612 N + + +FE+ VY + E K +A+G + W+ + +R Sbjct: 562 NENLGFKNITLFEIGSVYSSKREEKSKLALVASGCMQDECYPHTKAVKWNLFAFGTICQR 621 Query: 613 C----RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 C F ++ D +A+A ++ F D HP +S + + + G Sbjct: 622 CVGDLSFRNIRD-EANAKELLSHFCFTDE--------RLLHPYQSAFVYQKDKPI-GIIA 671 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHI 728 + HP + LS I E+ + S + S RDL ++D+ I Sbjct: 672 KLHPQVATNMDLSEEIFICEIEIGMSDFS------LPQAYEFSKYQKSTRDLTILIDKDI 725 Query: 729 PAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILM 787 P + I +++ + ++ DV+ K+LGE K +++I++++Q + T ++ + + Sbjct: 726 PFYRVRQILLEDQIAYVKNIYPIDVYYDKALGE-KMALSIRIVLQSDEGTLQEMQLVQAV 784 Query: 788 DRIVENVVKKTNAVLRS 804 + ++ +V++ +AVLR+ Sbjct: 785 ESVLSVLVREFDAVLRT 801 >gi|308183155|ref|YP_003927282.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] gi|308065340|gb|ADO07232.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori PeCan4] Length = 764 Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 216/835 (25%), Positives = 385/835 (46%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVNTPKDIAKLCEDLSCLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFAPVALKGAII--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ +S+SI L + +++ S L + + C N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPTSDSIALHVGENME-SHL--AYYLIC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + V +A + D + L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLNNFIEFSTHFSGVVMNAYSL-DATPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSTHLKAAILE---------SKQTKHALKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + EV VP++R D++ D Sbjct: 380 LEFELEDITEILGLAVEKETIQGILKNLGFKVSAKVPNSKPQILEVIVPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EVV++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVVHYVFY 497 Query: 517 SKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++ +G++K S + G+ W S C + D + L+ P Sbjct: 558 VYNSKREEIQKLGFLVSGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTTQTPI 617 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 HP +S I + EI+ G + HP ++ L FE Y Sbjct: 618 ---------------NHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSNIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|148978990|ref|ZP_01815280.1| phenylalanyl-tRNA synthetase beta subunit [Vibrionales bacterium SWAT-3] gi|145962079|gb|EDK27366.1| phenylalanyl-tRNA synthetase beta subunit [Vibrionales bacterium SWAT-3] Length = 334 Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 120/339 (35%), Positives = 194/339 (57%), Gaps = 10/339 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ SWL++ + ++ E++ +T GLEV+ V+ + + KV+ ++PD D Sbjct: 1 MKFSESWLREWVKPAINSEELAHQITMAGLEVDDVEPVAGEFTGVKVGKVVECGQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +ID G+ + + +VCGA N R+GL A G+ +P + + K+RG+ S GM+ Sbjct: 61 KLQVTKIDIGEEELLDIVCGASNCRLGLTVAVATVGAVLP-GDFKIKKAKLRGVPSHGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + +S I+ELP +G + + LEL+D IDV LT NR+DC +RG+A ++ Sbjct: 120 CSFSELGIDVESDGILELPEGTTLGMDVRELLELNDVTIDVDLTANRADCFSIRGLAREV 179 Query: 179 VAAGLGKLKEINISCPLSS--ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNV-APNWMR 235 + E + +S +++ +EIK + C + VK V +P WM+ Sbjct: 180 GVLNRADVTEPTVEAVATSIEDTVSVEIKA----TDACPRYLGRVVKNVNVKAESPIWMQ 235 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 ++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ LD E Sbjct: 236 EKLRRCGIRSIDPVVDITNYVMLEQGQPMHAFDLAKIEGGIVVRLAEQGEKLTLLDGNEA 295 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 +L+ + +VIA + +IAGI GG+ +G TTDVL++ Sbjct: 296 ELNSNTLVIADHNKALAIAGIFGGQDSGVTTETTDVLLK 334 >gi|255322488|ref|ZP_05363633.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] gi|255300396|gb|EET79668.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter showae RM3277] Length = 777 Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 214/845 (25%), Positives = 382/845 (45%), Gaps = 110/845 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPD 57 M + +WL + LD + V+ E + TL SIGLEV+ +E P IV V S ++ + Sbjct: 1 MIISRNWLNEWLDISSVTSETLLKTLNSIGLEVDSF--KEIRVPKNIVVGYVKSKIKHEN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 + ++ ++D G + +Q+VCGA NV G A G+ +P + + + K+RG+ES G Sbjct: 59 AEKLSVCQVDVG-GETLQIVCGAKNVEAGQFVPVALSGAVMP-SGLEIKRAKLRGVESNG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGV 171 M+CS EL L + IM P+D +G + +Y L+D II++ LTPNR DC+ V Sbjct: 117 MICSSVELGLVKTNDGIM--PLDESIGELKLGKEICEYPLLNDDIIEIELTPNRGDCLSV 174 Query: 172 RGIALDLVAA------------------GLGKLKEINISCPLSS--ESIPLEIKFDLDDS 211 G+A DL AA G+G++ I+ L S + EIK D++ Sbjct: 175 YGVARDLSAALDLPLKDAARYEEGENLLGIGRILAIHAEENLQSSFQYRAFEIKEYFDEN 234 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 L K + ++ + N +RL S L +Y L + VFD + Sbjct: 235 LLMK-IRLALIECDKQNRI-----ERLLDYATHSTGVLFSAYDYAKLKKDDERVVFDLQK 288 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +++ T +ILA G + I G+ A D+N+ + Sbjct: 289 GANLAT--------EILA-----------------GGELLGIGGVYQTDAARLDENSKLI 323 Query: 332 LVEVALWDPINIARS-GKNLGIITDSR-YRFERGVDLQ---GMIPVLKHIVSL-ILSLCG 385 +VE + DP IA + +N + ++ YR RG + G + K + +L ++L Sbjct: 324 IVEASYTDPEVIATTVYENKQMPRQAQTYRSLRGSEPNVGFGADFLFKQLAALKSVALYA 383 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFE 443 G+ + +T +P+ + F SE++++ G +V D +RIL++LGFS+ E + Sbjct: 384 GSQQSV-----MTREPKVVSFTMSEMQKMIGQEVAQNDVVRILKKLGFSLTFNAEKEGAN 438 Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 VP +R D+ D+ EEI+R+ G+D I S+PL ++ + + +++ A Sbjct: 439 AKVPLFRHDIVNAQDVCEEIVRMVGIDNIASKPLNFSEANRMNDTFVGYKNALNLRKKAA 498 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + E V++ F + G + EI NPI+++++ +R++L LLK+ RNV Sbjct: 499 AAGFFESVHYVFDDASELASLGFAPCKAEIANPINSELNTLRSTLANHLLKSAERNVKNQ 558 Query: 564 IADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 IFE V+ D + ++ ++A+G+ + S + G+ D F+ A Sbjct: 559 RKSVKIFEFGSVFSEDGEQSERFGFVASGLTREPSLLNGAKPADID-------FLGFATA 611 Query: 622 KADALSVIEPFVSLDSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 +A+ E V D +++ E Y G + +GY G + Sbjct: 612 VRNAVGEFELKVC-DDVKYLSEFEQAKIYQNG----------LCVGYIGRVDVRVEAARD 660 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN 739 L YL I +K + + V S + RDL+ IV + + + I Sbjct: 661 LP------RTYLCEIEF-EKLKFEGAVVKAYSKFPAISRDLSLIVPKTMKFEAIKECINA 713 Query: 740 VD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKT 798 + + + D++ + LG+ S++++ Q ++ T D+++ +MD+I++ + + Sbjct: 714 LKIECLKEFAPVDIYSDEKLGD-DVSLSVKFNFQDIQKTLEDEEVAAIMDKILDALKQNL 772 Query: 799 NAVLR 803 N LR Sbjct: 773 NIGLR 777 >gi|149002260|ref|ZP_01827202.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP14-BS69] gi|147759575|gb|EDK66566.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus pneumoniae SP14-BS69] Length = 533 Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 152/551 (27%), Positives = 273/551 (49%), Gaps = 31/551 (5%) Query: 265 HVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG 323 H FD + VR A +GEK++ LD +E DL +++VI + ++AG++GG+ Sbjct: 2 HAFDLDNFEGTDIRVREARAGEKLVTLDGEERDLDVNDLVITVADKPVALAGVMGGQATE 61 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 + ++ V++E A+++ +I ++ L + ++S RFE+G+++ + L SLI L Sbjct: 62 ISEKSSRVVLEAAVFNGKSIRKTSGRLNLRSESSSRFEKGINVATVNEALDAAASLIAEL 121 Query: 384 CGGTA-SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKF 442 G T I A + ++ ++V R+ G ++ D + RLGF + G D F Sbjct: 122 AGATVRKGIVSAGELDTSDVEVSSTLADVNRVLGTELSYADVEDVFRRLGFGLSGNADSF 181 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED---KRNLSLQQSRTRYVK 499 V VP R D+ +ADL EEI RIYG D+ LP + +D L+ Q R V+ Sbjct: 182 TVRVPRRRWDITIEADLFEEIARIYGYDR-----LPTSLPKDDGTAGELTATQKLRRQVR 236 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGR 558 + + E++ ++ + E++V F L E++ P++ D S +R +++ G+L Sbjct: 237 TIAEGAGLTEIITYTLTTPEKAVEFTAQPSNLTELMWPMTVDRSVLRQNMISGILDTVAY 296 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF-VD 617 NV R + A++E+ V+E T ++ + I + + G L ++K + VD Sbjct: 297 NVARKNKNLALYEIGKVFEQ-TGNPKEELPNEINSFAFALTG---LVAEKDFQTAAVPVD 352 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNI 674 F AK ++E + L+ A S HPGR+ +I + VLG+ G+ HP Sbjct: 353 FFYAKG----ILEALFTRLGLQVTYTATSEIASLHPGRTAVISLGDQ-VLGFLGQVHPVT 407 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + + E+ L +I + + T V ++ V RD+A ++ + +V Sbjct: 408 AKAYDIPETYVA-ELNLSAIEAALQPAT---PFVEITKFPAVSRDVALLLKAEVTHQEVV 463 Query: 735 NIIK--NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + I+ V RL D+ +FDVF G+ LG G KS+A + Q +D+ D+++ M++I Sbjct: 464 DAIQAAGVKRLT-DIKLFDVFSGEKLGLGMKSMAYSLTFQNPEDSLTDEEVARYMEKIQA 522 Query: 793 NVVKKTNAVLR 803 ++ +K NA +R Sbjct: 523 SLEEKVNAEVR 533 >gi|210135211|ref|YP_002301650.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori P12] gi|210133179|gb|ACJ08170.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter pylori P12] Length = 764 Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 215/837 (25%), Positives = 385/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK ++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVDDLNVFVNTPKDIAKLCEDLSCLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ +S+SI L + +++ S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPTSDSITLSVGENIE--SYLAYYLVC------NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ + L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLKNFIEFSAHFSGVILNAYSLN---------TTPMDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL S K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTKHS---------LKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + E+ P++R D++ D Sbjct: 380 LTFQLEDITEILGLAVEKEKIQSILKNLGFKVSAKEPNSKPQILEIVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+PL +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLVSKPL---HCVSSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE+ G E LE+ NPI+ D++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTDLNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY E QK ++ +G++K S + G+ W F + A+ +S + Sbjct: 556 GSVYNAKREEIQKLGFLVSGLQKKESYPDAKGKAWD------------FYSFAECVSKVI 603 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 SL+ R + P HP +S I + EI+ G + HP ++ L FE Y Sbjct: 604 GDFSLE--RLTAQTP-INHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I + KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESHNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|208434948|ref|YP_002266614.1| phenylalanyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] gi|208432877|gb|ACI27748.1| phenylalanyl-tRNA synthetase, beta subunit [Helicobacter pylori G27] Length = 764 Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 214/837 (25%), Positives = 386/837 (46%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVNTPKDIAKLCEDLSCLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + +VCGA NV A G+ I ++ + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLPIVCGAKNVAPNQFVPVALNGALI--GSITIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L +Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELDEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ +S+ I L + +++ S L + + C N+ Sbjct: 174 GIAREISAFYNTPLKPIKALNFTPTSDLITLSVGENIE-SHL--AYYLVC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A + ++ + L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLNNFIEFSTHFSGVILNAYSL-NITPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R II KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----SIIAIKHQVQKDLSECLLLEASYIDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL S K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTKHS---------LKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + EV P++R D++ D Sbjct: 380 LTFQLEDITEILGLAVEKEKIQSILKNLGFKVSAKEPNSKPQILEVIAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+PL +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLISKPL---HCVSSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY + E QK ++A+G++K S + G+ W S C + D + L++ Sbjct: 556 GSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTIQT 615 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 P HP +S I + EI+ G + HP ++ L FE Y Sbjct: 616 PI---------------NHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKTLEILEKEFNARLK 763 >gi|154148616|ref|YP_001406073.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter hominis ATCC BAA-381] gi|153804625|gb|ABS51632.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter hominis ATCC BAA-381] Length = 772 Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 202/821 (24%), Positives = 363/821 (44%), Gaps = 88/821 (10%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL + +D T++S +KI L SIGLEV+ I V S + + + D Sbjct: 1 MIITRNWLNEWIDITEISTDKILKALNSIGLEVDSYKKFSVADKVVIGYVKSKKAHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +DTG Q +Q+VCGA NV G + G+ +P N + + K+RG+ES GM+ Sbjct: 61 HLSVCEVDTGS-QSLQIVCGAKNVESGQFVAVSLIGAVLP-NGLTIKPAKLRGVESNGMI 118 Query: 119 CSEKELMLS--DDSASIMELPIDAPVGGR-LSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL +D +++ I V GR L++YL +D +ID+ LTPNR DC+ + GIA Sbjct: 119 CSSSELGFPKLNDGIMVLDDSIGELVLGRNLNEYLAFNDELIDIDLTPNRGDCLSIYGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSS-----ESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 DL AA LK N + + + +D S + + F ++N Sbjct: 179 RDLSAALNIPLKNKNFTEEAEKLLGIGRILSVHADEKIDASFIYRAFE------IKNRFD 232 Query: 231 PNWMRQ-RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD----VLTVRRACSGE 285 + RL + S LV++ NY + G +D ++I++ + +++ +GE Sbjct: 233 ITLTHKLRLAFAEILSNDTLVNLLNYTTHSTGVLLRAYDFNKITNKDKISIDIKKQENGE 292 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 + + D ++ IAGI + ++ +VE +P IA Sbjct: 293 ----------------LAVFCDDKLLGIAGINQNSDFKANKDSKICIVEANYTNPQIIAE 336 Query: 346 S-GKNLGIITDSR-YRFERGVDLQGMIPVLKHIVSLI-----LSLCGGTASDICIARNIT 398 + G+N + D YR RG + +I L + S + +L G + T Sbjct: 337 ALGENRKLKGDEHTYRSTRGSE-PNLILGLNLLFSFLKNKDEFALFAGAQQILN-----T 390 Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +P+ + F N+E+ + G + L+IL+ LG V + + ++P++R D+ D Sbjct: 391 KEPKIVSFTNAEIDEMIGTKIEKNQILKILKSLGIDVNMDNELITATIPTFRHDISNSHD 450 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 + EEI+RI G+D I S+PL + + ++ A+ E V++ F ++ Sbjct: 451 ICEEIVRIIGIDNIASKPLVFAENCRFNETFFDYENAKKIRYKSANIGFFECVHYIFDNE 510 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 E+ G E++ILNPI+A++S +R +L+ LL ++ N+ + +FE +++ Sbjct: 511 EELKNLGFVPCEVKILNPINAELSVLRPTLINHLLNSSNLNLRNSKKSIKLFEFGKIFDE 570 Query: 579 DTPEGQ--KYMAAGIRKGSSGIEGSGRLWSDKSE--ERCRFVDLFDAKADALSVIEPFVS 634 E ++A+G++ S L S K E + F L S + P + Sbjct: 571 KGVEKDCFGFIASGLKNEPS------LLNSAKPENVDFLYFASLIQNIIGKFSCVLPDKN 624 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + L A W + + GII F N + Y+ + Sbjct: 625 IKFLNDFEQAEIWQNGVKVGIIGR-------------------FKFENERDLAKTYVCEM 665 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF---D 751 K + + S + RDL+ +V ++ + N + N+ I D+ F D Sbjct: 666 DFKALKFNEI-NAKNYSKFPSISRDLSVVVPNNMRFEVIKNALNNLQ--ISDLKEFLPVD 722 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +++ ++L + S+ I+ + Q L+ T D+ I + +I++ Sbjct: 723 IYKDENLKDS-YSLTIKFIFQNLEKTLEDEQIEAKITQILK 762 >gi|317180148|dbj|BAJ57934.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori F32] Length = 764 Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 214/834 (25%), Positives = 381/834 (45%), Gaps = 102/834 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE + ++P +V +E+ P + Sbjct: 1 MKLSINDLNVFVDTPKDIAKLCEDLSRLGLEVE--SSIPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESYGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A ++ A LK I + + +S + I + S + +C N+ Sbjct: 174 GVAREISAFYHTPLKPIK-ALNFTPKSDLITISAGENIESHLAYYLVC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + + +A + D + L++ N Sbjct: 227 PLNVKLSLAHNNALSE-NDLNNFIEFSMHFSGVIMNAYSL-DATPID--------LSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I R I KH D + +L+E + DPIN++ + K+ Sbjct: 277 DENNL--ESVYINHQKR-----STIAIKHQDQKDLSEHLLLEASYTDPINLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL S K R + Sbjct: 330 KTLQKDNALIYRSTRGSNPNLSDGLNFLSAHLKAAILESKQTKHS---------LKDRTL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ + E IL+ LGF V + EV P++R D++ D+ Sbjct: 381 EFKLEDITEILGLAIEEETIQGILKNLGFKVSTKVSNSKPQILEVVAPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFIS 517 EEILR G+D + S+PL V +K++ + + +K + EVV++ F S Sbjct: 441 AEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVVHYVFYS 498 Query: 518 KEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E V Sbjct: 499 KEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSV 558 Query: 576 YENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E QK ++A+G++K S + G+ W S C + D + L+ P Sbjct: 559 YNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTTKTPI- 617 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 HP +S I + EI+ G + HP ++ L FE Y Sbjct: 618 --------------NHPYQSAKIIQNHEII-GVIAQIHPKVIQELDL------FESYYAE 656 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ D Sbjct: 657 IDASKLKRPTM--LLKPFSIYPSSVRDLTLIIDENTAFSNIKKALKDAKIPNLSEILPLD 714 Query: 752 VFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 715 IFK-----ESNNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|205356381|ref|ZP_03223146.1| phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] gi|205345766|gb|EDZ32404.1| phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8421] Length = 773 Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 220/838 (26%), Positives = 388/838 (46%), Gaps = 100/838 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL AA LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLAAALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++++G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIESLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 DP+ IA K D + YR RG + P L + +LS+ G + + + + Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSE-----PKLNLGMDFLLSIFGQIPNLVIYSSS 384 Query: 397 ---ITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWR 450 +T K I+ +N E + + G +V ++ L+IL++LGF +I GE V P R Sbjct: 385 QQILTDKELPIIPINIEGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHR 443 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAM 507 D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS Sbjct: 444 PDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GY 500 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 E +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 501 FESLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKII 560 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 +FE+ V+ + E + I SG++ ++ + E +F D D + Sbjct: 561 KLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKN 612 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICG 686 +I F + +S + P I S +I +G+ G H I + L IC Sbjct: 613 IIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC- 664 Query: 687 FEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLID 745 E+ LD I R K S + RDL+ ++ + + N I+ ++ +++ Sbjct: 665 -ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILE 717 Query: 746 DVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 718 NFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 773 >gi|261838385|gb|ACX98151.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter pylori 51] Length = 764 Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 215/834 (25%), Positives = 382/834 (45%), Gaps = 102/834 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVDTPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I ++ + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSITIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSGELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA ++ A LK I + + +S + + D + S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIK-ALNFTPKSDLITLHADENIESHLVYYLIC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + V +A + D + L++ N Sbjct: 227 PLNVKLSLAHNNALSE-NDLNNFIEFSAHFSGVVMNAYSL-DATPID--------LSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I R I KH D + +L+E + DPI+++ + K+ Sbjct: 277 DENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL S K R Sbjct: 330 KTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILESKQTKHS---------LKDRTF 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ V E IL+ LGF V + EV P++R D++ D+ Sbjct: 381 KFKLEDITEILGLAVEEETIQGILKNLGFKVSIKVSNSKPQILEVVAPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFIS 517 EEILR G+D + S+ PL V +K++ + + +K + EV+++ F S Sbjct: 441 AEEILRFVGIDHLISK--PLDSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFYS 498 Query: 518 KEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E V Sbjct: 499 KEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSV 558 Query: 576 YENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E QK ++A+G++K S + G+ W S C + D + L+ P Sbjct: 559 YNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFNLEKLTTKTPI- 617 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 HP +S I + EI+ G + HP ++ L FE Y Sbjct: 618 --------------NHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESYYAE 656 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ D Sbjct: 657 IDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPLD 714 Query: 752 VFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 715 IFK-----ESNNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|261839785|gb|ACX99550.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori 52] Length = 764 Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 219/842 (26%), Positives = 386/842 (45%), Gaps = 118/842 (14%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVDVPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + +IRG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTEIRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--------FAMCCVKG 224 GIA ++ A LK I +++ K DL +LC G + + C Sbjct: 174 GIAREISAFYHTPLKPI--------KALNFTPKSDL--ITLCVGENIESHLAYYLVC--- 220 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 N+ + +L ++S D+ N++ L + V +A ++ + Sbjct: 221 --NHSLKTPLNVKLSLAHNNALSE-NDLNNFIELSTHFSGVVMNAYSLN---------TT 268 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 L++ N E +L ++V I R I KH D + +L+E + DPI+++ Sbjct: 269 PIDLSVKNDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLS 321 Query: 345 ---RSGKNLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARN 396 + K+ + D+ YR RG + G+ + H+ + IL Sbjct: 322 LKLHALKDKTLQKDNALIYRSTRGSNPNLSDGLNFLSAHLKAAILE---------SKQTK 372 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQ 451 K R + F ++ + G+ + E IL+ LGF V + EV P++R Sbjct: 373 HALKDRTLEFKLEDITEILGLAIEEETIQGILKNLGFKVSTKVPNSKPQILEVVAPNFRH 432 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMME 509 D++ D+ EEILR G+D + S+PL V +K++ + + +K + E Sbjct: 433 DIKTIQDIAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKE 490 Query: 510 VVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 VV++ F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + Sbjct: 491 VVHYVFYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSI 550 Query: 568 AIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 A++E VY + E QK ++A+G++K S + G+ W F + A+ Sbjct: 551 ALYEKGSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAEC 598 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +S + SL+ L + AP HP +S I + EI+ G + HP ++ L Sbjct: 599 VSKVIGDFSLEKLT--TQAP-INHPYQSAKIIQNHEII-GVIAKIHPKVIRELDL----- 649 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RL 743 FE Y I S+ KR ++ S++P RDL I+D++ + +K+ Sbjct: 650 -FESYYAEIDASKLKRPTM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPN 706 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + ++ D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA Sbjct: 707 LSEILPLDIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNAR 761 Query: 802 LR 803 L+ Sbjct: 762 LK 763 >gi|57237725|ref|YP_178973.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni RM1221] gi|66773842|sp|Q5HUR2|SYFB_CAMJR RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|57166529|gb|AAW35308.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni RM1221] gi|315058336|gb|ADT72665.1| Phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni S3] Length = 773 Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 216/840 (25%), Positives = 386/840 (45%), Gaps = 104/840 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL AA LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLAAALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIGLKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ ++ + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFIINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASD 390 DP+ IA K D + YR RG + + ++ + +HI +L++ ++ Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEHIPNLVIY---SSSQQ 386 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPS 448 I + + P I + + G +V ++ L+IL++LGF +I GE V P Sbjct: 387 ILTDKELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPL 441 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASR 505 R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS Sbjct: 442 HRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS- 498 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 499 GYFESLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKK 558 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ + E + I SG++ ++ + E +F D D Sbjct: 559 IIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDI 610 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-I 684 ++I F + +S + P I S +I +G+ G H I + L I Sbjct: 611 KNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYI 663 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 C E+ LD I R K S + RDL+ ++ + + N I+ ++ + Sbjct: 664 C--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEI 715 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 716 LENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 773 >gi|108563415|ref|YP_627731.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori HPAG1] gi|107837188|gb|ABF85057.1| phenylalanyl-tRNA synthetase, beta subunit [Helicobacter pylori HPAG1] Length = 764 Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 219/837 (26%), Positives = 384/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDAPKDITKLCEDLSRLGLEVESC--MLCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 G+A ++ A LK I ++ S+ I L + +++ + V N+ Sbjct: 174 GVAREISAFYHTPLKPIKALNFTPKSDWITLSVGENIE--------SHLAYYLVYNHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 ++ +L ++S D+ N++ + + +A ++ +T L++ Sbjct: 226 TPLKVKLSLAHNNALSE-NDLNNFIEFSTHFSGVIMNAYSLN--ITPMD-------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI-----ARS 346 N E +L ++V I R I KH D + +L+E + DPI++ A Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYIDPISLSLKLHALK 328 Query: 347 GKNLGIITDSRYRFERGVD---LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 K L YR RG + L G+ + H+ + IL G + K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLLDGLNFLSAHLKAAILE--GKQTQH-------SLKDRA 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V I E + EV VP++R D++ D Sbjct: 380 LTFQLEDITEILGLAVEEEKIQDILKNLGFKVSIKEPNSKPQILEVVVPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+ L +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLVSKTLNCIS---NKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE+ G E LE+ NPI+ D++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTDLNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY E QK ++ +G++K S + G+ W F + A+ +S I Sbjct: 556 GSVYNAKREEVQKLGFLVSGLQKKESYPDAKGKAWD------------FYSFAECVSRII 603 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 SL+ L + HP +S I + EI+ G + HP ++ + L FE Y Sbjct: 604 GDFSLEKL---TAQTPINHPYQSAKIIQNNEII-GVIAKIHPKVIQEWDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIEKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESHNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|152990409|ref|YP_001356131.1| phenylalanyl-tRNA synthetase subunit beta [Nitratiruptor sp. SB155-2] gi|151422270|dbj|BAF69774.1| phenylalanyl-tRNA synthetase, beta subunit [Nitratiruptor sp. SB155-2] Length = 776 Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 206/841 (24%), Positives = 371/841 (44%), Gaps = 103/841 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL++ +D DV +++ SIGLEV + E + KV+S +++P+ D Sbjct: 1 MIVTREWLQEWIDINDVPTQELITIFNSIGLEVAEYKKIEIPKNVVVGKVVSCQKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G+ +++Q+VCGA NV A G+ +P + + K+R +ES GM+ Sbjct: 61 KLNLCEVDVGE-EKLQIVCGAKNVVHAEYVAVAKIGAMLP-GDFHIKPAKLREVESFGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDA---PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L IM L VG L +Y L+D II++ LT NR DC+ + GIA Sbjct: 119 CSSTELGLPKLEEGIMILDHSIGTLEVGKELREYPLLNDEIIELELTANRGDCLSILGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSES-----IPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 +L +KEIN P + + + + D++ + K F + + Sbjct: 179 RELSVVLERSIKEINYQKPDQMQIGIGRIVQFQPESDIESNVAYKAFQLETQEN------ 232 Query: 231 PNWMRQRLKAVGLRSISALVDITN-YVSLDRGYPSHVFDASRISD--VLTVRRACSGEKI 287 P +R R VG DI Y+S G + ++ + +D T+R Sbjct: 233 PLLIRYRTALVG-EEFKNFADILGFYISHATGVVTRIYGLNFFTDEESYTIR-------- 283 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 + D YD V G SI G+I A N T ++E + DP +I++ Sbjct: 284 IHKDENGYDA----VYGTKKG---SIIGVIQFDEAKPVQNDTIYILETSYIDPSSISKKM 336 Query: 348 KNLGIITD-SRYRFERGVD--LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + +D YR RG D L + K ++ A + + I + KI Sbjct: 337 YEHPVKSDWVYYRSSRGSDPRLSIGLEYAKKYINEHYENPQFYAGRHEVEKEIVKEALKI 396 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEI 463 F ++ ++ G ++ + IL+ LGF ++ D V P +R D+ D+ EE+ Sbjct: 397 SF--EQLNQIIGQEIEKTRVVDILKNLGFEIVSVSEDSLIVKPPVFRHDIANIQDIAEEV 454 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +RIYG+++I S PL + L+ + ++ ++ +E V++ F++KE+ Sbjct: 455 VRIYGIEKIDSRPLMYVEQNRITEAYLRYKAKKSIRERAVAQGYVETVSYIFVNKEELEK 514 Query: 524 FGGG--QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 +G + L+++NPI+ +M+ +RTSL+P LL+ N+ +FE+ Sbjct: 515 YGFATVHKNLDLINPITNEMNTLRTSLVPNLLQQLQNNIKNGYKRVKLFEI--------- 565 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE----PFVSLDS 637 G ++ K EE FV +F + + SV+ P V L + Sbjct: 566 --------------------GTIFDQKREESEEFVLIFSGQKEPESVVNHGKAPVVDLPT 605 Query: 638 LRFE-------------SGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 E + HP + + IIK Y G+ + L+ + Sbjct: 606 FLNELSAIIGDFDVSEGEASHKLVHPYQVAKIIKDGK-----YIGQAYKLHLEMQKELDV 660 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDR 742 + +D ++ + V+ SL +DL+ +VD+ +P ++ ++ KN+ + Sbjct: 661 PTTYIAQIDFEELTLIYPKAKEYSVYQRSL----KDLSVVVDRTLPYESIKTVLEKNLPK 716 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 + + D+++ +SLG+ KKSV I+ IQ + T +++I ++++I++ + ++ A L Sbjct: 717 EVRNFYPVDIYEDESLGD-KKSVTIRFAIQSFEKTLTEEEISKILEKILKILQEEIGATL 775 Query: 803 R 803 R Sbjct: 776 R 776 >gi|283954457|ref|ZP_06371977.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] gi|283794074|gb|EFC32823.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 414] Length = 773 Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 223/846 (26%), Positives = 385/846 (45%), Gaps = 116/846 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++SL+KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISLDKITKTLNSIGIEVDRVGVLKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIG-SEILQIVCGATNVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML DDS +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINDGIMLLDDSIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGF----AMCCVK 223 + GIA DL A LKE P L I L GF A+ K Sbjct: 173 SIYGIARDLATALNLNLKE---PKPFKENENVLGIGRILRLAAEKELNGFYNYRAIELKK 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ N +++++G SI L+ NY + G + +D S S+ + + Sbjct: 230 QIQTNLLLNLRLAQIESLGKNSIENLL---NYATHSTGVLFNAYDLSIFSEKDDEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C +++ V++E Sbjct: 287 SKQAHGE----------------TKVSCKDKLLSFSGIFQNDESRCKNDSKIVIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 DP+ IA K D + YR RG + P L + +LS+ I Sbjct: 331 DPLVIA-DAKMYHKDQDEKTLYRSFRGSE-----PRLNLGMGFLLSILEQ------IPDL 378 Query: 397 ITYKPRKIVFMNSEVKR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEV 444 + Y + + N ++ + G ++ + L+IL++LGF +I GE V Sbjct: 379 VIYSSSQQILTNKKLSIIPISIESIGDIIGQNIDEDKVLKILKKLGFELILLGE-GVVNV 437 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRV 501 P R D+ +D+ EE++RI G+D I S+ L VE R S ++ ++ KR Sbjct: 438 KAPLHRPDINNLSDICEEVIRIIGIDNIASKGLKF--VEKNRLNSTYKNYIEFLNLRKRA 495 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +AS E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N Sbjct: 496 VAS-GYFESLHYILDNEEELKRLGFDSIKLKLINPITAELNTLRTTLLNHLLNAASLNAK 554 Query: 562 RAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF 619 + +FE+ V+ ++ E + ++ +G+R+ + S+K+ + V + Sbjct: 555 NSKKIIKLFELGAVFNSNNQELNRIAFVHSGLREEAK--------ISNKA--KPELVQFY 604 Query: 620 DAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG 679 D D ++I F + +S + P I S ++ +G+ G H I + Sbjct: 605 DFLLDIKNIIGDF------QLKSSKYNILSPYEQADIYLS-DVKVGFIGRLHLKIENERD 657 Query: 680 L-SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK 738 L IC E+ LD I K+ K K S + RDL+ ++ + + N IK Sbjct: 658 LPKTYIC--ELDLDLI----KQDFKIAK--PYSKFPAITRDLSVLIPKGFEYNQIKNCIK 709 Query: 739 NVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ ++++ + D++ ++L +G S+ I + + T D+ + MD+I+ N +KK Sbjct: 710 ELNLEILENFRLVDIYSDENL-KGFYSITISFSFRDINKTLEDNQVSECMDKIL-NTLKK 767 Query: 798 TNAVLR 803 LR Sbjct: 768 LGLDLR 773 >gi|223039622|ref|ZP_03609909.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] gi|222879193|gb|EEF14287.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter rectus RM3267] Length = 777 Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 217/850 (25%), Positives = 379/850 (44%), Gaps = 120/850 (14%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPD 57 M + +WL + LD + V+ E + TL SIGLEV+ +E P IV V S ++ + Sbjct: 1 MIISRNWLNEWLDISSVTSETLLKTLNSIGLEVDSF--KEIRVPKNIVVGYVKSKIKHEN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 + ++ ++D G + +Q+VCGA NV G A G+ +P + + + K+RGIES G Sbjct: 59 AEKLSVCQVDVG-GETLQIVCGAKNVEAGQFVPVALSGAVMP-SGLEIKRAKLRGIESNG 116 Query: 117 MMCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGV 171 M+CS EL L + IM P+D +G + +Y L+D II++ LTPNR DC+ V Sbjct: 117 MICSSVELGLVKTNDGIM--PLDESIGELKLGKEICEYPLLNDDIIEIELTPNRGDCLSV 174 Query: 172 RGIALDLVAA------------------GLGKLKEINISCPLSS--ESIPLEIKFDLDDS 211 G+A DL AA G+G++ I+ L S + EIK D++ Sbjct: 175 YGVARDLSAALDLPLKDAARYEEGENLLGIGRILAIHAEENLQSGFQYRAFEIKEYFDEN 234 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 L K + ++ + N +RL S L +Y L + VFD + Sbjct: 235 LLMK-IRLALIECDKQNRI-----ERLLDYATHSTGVLFSAYDYAKLKKDDERAVFDLQK 288 Query: 272 ISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 +++ T +ILA ++ G Q+ A A D+N+ + Sbjct: 289 GTNLAT--------EILAG----------GELLGVGGVYQTDA-------ARLDENSKLI 323 Query: 332 LVEVALWDPINIARSGKNLGIITDSR-------YRFERGVDLQ---GMIPVLKHIVSL-I 380 +VE + DP IA + + D + YR RG + G + K + +L Sbjct: 324 IVEASYTDPQVIATT-----VYEDKQMPRRAQVYRSLRGSEPNVGFGADFLFKQLAALKS 378 Query: 381 LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GE 438 ++L G+ + +T +P+ + F SE++++ G +V D +RIL++LGFSV E Sbjct: 379 VALYAGSQQSV-----MTREPKVVSFTMSEMQKMIGQEVAQNDVVRILKKLGFSVTFNAE 433 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 + V VP +R D+ D+ EEI+R+ G+D I S+PL ++ + + Sbjct: 434 KEGANVKVPLFRHDIVNAQDVCEEIVRMVGIDNIASKPLNFSEANRINDTFTDYKNALNL 493 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 ++ A+ E V++ F + G + EI NPI+++++ +R +L LLK+ R Sbjct: 494 RKKAAAAGFFESVHYVFDDAGELAALGFAPCKAEITNPINSELNTLRPTLANHLLKSAER 553 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 NV IFE V+ D + ++ ++A+G+ K S + G+ D F+ Sbjct: 554 NVKNQRKSVKIFEFGSVFSEDGEQSERFGFVASGLTKEPSLLNGAKPADID-------FL 606 Query: 617 DLFDAKADALSVIEPFVSLDSLRF--ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 A +A+ E + D +++ E Y G + +GY G + Sbjct: 607 GFATAVRNAVGEFE-LKACDDVKYLSEFEQAKIYQNG----------VCVGYIGRVDVRV 655 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 L YL I +K + V S + RDL+ IV + + + Sbjct: 656 EAARDLP------RTYLCEIEF-EKLKFDIAVVKAYSKFPAISRDLSLIVPKSMKFEAIK 708 Query: 735 NIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 I + + + D++ + LG+ S++++ Q ++ T D+++ +MD+I++ Sbjct: 709 ECINALKIECLKEFAPVDIYSDEKLGD-DVSLSVKFNFQDIQKTLEDEEVAAIMDKILDA 767 Query: 794 VVKKTNAVLR 803 + + N LR Sbjct: 768 LKQNLNIGLR 777 >gi|317012825|gb|ADU83433.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Lithuania75] Length = 764 Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 211/836 (25%), Positives = 378/836 (45%), Gaps = 106/836 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVDTPKDIAKLCEDLSCLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGVLI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 G+A ++ A LK I + + +S + + D + S + +C N+ Sbjct: 174 GVAREISAFYHTPLKPIK-ALNFTPKSDLITLSADKNIESHLAYYLIC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S ++ N++ + + +A ++ L++ N Sbjct: 227 PLNIKLSLAHNNALSE-NNLNNFIEFSAHFSGVILNAYSLNKT---------PMDLSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I R I KH D + +L+E + DPI+++ + K+ Sbjct: 277 DENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPISLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL S K R + Sbjct: 330 KTLQKDNALIYRSARGSNPNLSDGLNFLSTHLKATILESKQTEHS---------LKDRAL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ V E IL+ LGF V + EV P++R D++ D+ Sbjct: 381 KFQLEDITEILGLAVEKEKIQGILKNLGFKVSIKVSNSNPQILEVIAPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSF 515 EEILR G+D + S+PL +N + R+ + L +A+ EV+++ F Sbjct: 441 AEEILRFVGIDNLVSKPL---NSVSSKNSNPHYETHRFFEN-LKHKALACGFKEVIHYVF 496 Query: 516 ISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 497 YSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKG 556 Query: 574 HVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 VY + E QK ++A+G++K S + G+ W S C + D + L+ P Sbjct: 557 SVYNSKRKEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTTQTP 616 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 HP +S I + EI+ G + HP ++ L FE Y Sbjct: 617 I---------------NHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESYY 654 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 I + KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 655 AEIDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSEILP 712 Query: 750 FDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E S+A+ V +I L+ T D+++ + +++E + K+ NA L+ Sbjct: 713 LDIFK-----ESNNSIALSVRCVIHSLEKTLNDEEVNSAVQKVLEILEKEFNARLK 763 >gi|148926580|ref|ZP_01810262.1| phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] gi|145845274|gb|EDK22368.1| phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni CG8486] Length = 773 Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 217/835 (25%), Positives = 385/835 (46%), Gaps = 94/835 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL AA LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLAAALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 ++ N+ + +++ +G SI L+ NY + G + +D S S+ Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEK-------D 279 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 E + L Q Y + ++ ++ S +GI + C D++ +++E DP+ I Sbjct: 280 EEFTINLSKQVYGETK----VSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVI 335 Query: 344 ARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASDICIAR 395 A K D + YR RG + + ++ + + I +L++ ++ I + Sbjct: 336 A-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLSIFEQIPNLVIY---SSSQQILTDK 391 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDV 453 + P I + + G +V ++ L+IL++LGF +I GE V P R D+ Sbjct: 392 ELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHRPDI 446 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEV 510 + +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS E Sbjct: 447 KNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GYFES 503 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N + +F Sbjct: 504 LHYVLDNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLF 563 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 E+ V+ + E I SG++ ++ + E +F D D ++I Sbjct: 564 ELGAVFNVNNQE-----LNHIAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKNIIG 615 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFEV 689 F + +S + P I S +I +G+ G H I + L IC E+ Sbjct: 616 DF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC--EL 666 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 LD I R K S + RDL+ ++ + + N I+ ++ ++++ Sbjct: 667 DLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFR 720 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 721 LVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLELR 773 >gi|217032280|ref|ZP_03437777.1| hypothetical protein HPB128_142g28 [Helicobacter pylori B128] gi|298735949|ref|YP_003728474.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter pylori B8] gi|216946046|gb|EEC24659.1| hypothetical protein HPB128_142g28 [Helicobacter pylori B128] gi|298355138|emb|CBI66010.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter pylori B8] Length = 764 Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 213/837 (25%), Positives = 381/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSTFVDVPKDIAKLCEDLSCLGLEVESC--IPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + +VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDIGK-EVLPIVCGAKNVASNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L +++ + V N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDWITLSAGENIE--------SHLAYYLVYNHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLNNFIEFSTHFSGVIMNAYSLNKTPID---------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R II KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----SIIAIKHQDQKDLSEYLLLEASYIDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL S K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTEHS---------LKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + E + EV P++R D++ D Sbjct: 380 LTFQLEDITEILGLAVEKEKIQGILKSLGFKVSVKEPNSNPQILEVVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+PL +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLVSKPLNCV---SSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY + E QK ++A+G++K S + G+ W S C + D + L+ Sbjct: 556 GSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTAQT 615 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 P HP +S I + EI+ G + HP ++ L FE Y Sbjct: 616 PI---------------NHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ ++ + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESHNTIALSVRCVIHSLEKTLNDEEVNSVVQKALEILEKEFNARLK 763 >gi|332673853|gb|AEE70670.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter pylori 83] Length = 764 Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 221/842 (26%), Positives = 389/842 (46%), Gaps = 118/842 (14%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK ++ L +DT + K+C+ L+ +GLEVE + ++P +V +E+ P + Sbjct: 1 MKLIVNDLNVFVDTPKDIAKLCEDLSRLGLEVE--SSIPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--------FAMCCVKG 224 GIA ++ LK I +++ K DL +LC G + + C Sbjct: 174 GIAREISTFYHTPLKPI--------KALNFTPKSDL--ITLCAGENIESHLAYYLIC--- 220 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 N+ + +L ++S D+ N++ + V +A + +V + Sbjct: 221 --NHSLKTPLNVKLSLAHNNALSE-NDLNNFIEFSMHFSGVVMNAYSM-NVAPID----- 271 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 L++ N E +L ++V I R I KH D + +L+E + DPI+++ Sbjct: 272 ---LSVKNDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLS 321 Query: 345 ---RSGKNLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARN 396 + K+ + D+ YR RG + G+ + H+ + IL Sbjct: 322 LKLHALKDKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTK 372 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQ 451 K R + F ++ + G+ + E IL+ LGF V I E EV P++R Sbjct: 373 HALKDRTLKFKLEDITEILGLAIEEETIQGILKNLGFKVSIKEPSSKPQILEVVAPNFRH 432 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMME 509 D++ D+ EEILR G+D + S+PL V +K++ + + +K + E Sbjct: 433 DIKTIQDVAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKE 490 Query: 510 VVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 V+++ F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + Sbjct: 491 VIHYVFYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSI 550 Query: 568 AIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 A++E VY + E QK ++A+G++K S + G+ W F + A+ Sbjct: 551 ALYEKGSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAEC 598 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 +S + SL+ L + AP HP +S I + EI+ G + HP ++ L Sbjct: 599 VSKVIGDFSLEKLT--TQAP-INHPYQSAKIIQNHEII-GVIAKIHPKVIRELDL----- 649 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RL 743 FE Y I S+ KR ++ S++P RDL I+D++ + +K+ Sbjct: 650 -FESYYAEIDASKLKRPTM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPN 706 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + ++ D+F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA Sbjct: 707 LSEILPLDIFK-----ESHNSIALSVRCVIYSLEKTLNDEEVNSAVQKALEILEKEFNAR 761 Query: 802 LR 803 L+ Sbjct: 762 LK 763 >gi|254779606|ref|YP_003057712.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori B38] gi|254001518|emb|CAX29536.1| Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Helicobacter pylori B38] Length = 764 Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 212/837 (25%), Positives = 381/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVNTPKDVAKLCENLSRLGLEVESC--IPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + +VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLPIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L + +++ + + N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLIMLSVGENIE--------SHLAYYLIYNHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLKNFIEFSVHFSGVIMNAYSLNKT---------PMDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E DL ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENDL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL S K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTQHS---------LKDRA 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + E + EV P++R D++ D Sbjct: 380 LTFQLEDITEILGLVVEKEKIQGILKNLGFKVSVKEPNSKPQILEVIAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+PL +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLVSKPLNCV---SSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDSLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY + E QK ++ +G++K S + G+ W S C + D + L++ Sbjct: 556 GSVYNSKREEVQKLGFLVSGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEKLTIQT 615 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 P HP +S I + EI+ G + HP ++ L FE Y Sbjct: 616 PI---------------NHPYQSAKIIQNHEII-GTIAKIHPKVIQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDTSKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESHNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|317182305|dbj|BAJ60089.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori F57] Length = 764 Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 215/834 (25%), Positives = 383/834 (45%), Gaps = 102/834 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE A + KVL E+ P + Sbjct: 1 MKLSVNDLSVFVDTPKDIAKLCEDLSRLGLEVESCIPCTAPKNVVVGKVL--EKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESYGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA ++ A LK I + + +S + + D + S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIK-ALNFTPKSDLITLHADENIESHLAYYLIC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + V +A ++ + L++ N Sbjct: 227 PLNVKLSLAHNNALSE-NDLNNFIEFSAHFSGVVMNAYSMN---------AAPIDLSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I I KH D + +L+E + DPI+++ + K+ Sbjct: 277 DENNL--ESVYINYQKH-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL S K R + Sbjct: 330 KTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILESKQTKHS---------LKDRTL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ + E IL+ LGF V + EV P++R D++ D+ Sbjct: 381 KFKLEDITEILGLAIEEETIQGILKNLGFKVSAKVPSSKPQILEVVAPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFIS 517 EEILR G+D + S+PL V +K++ + + +K + EV+++ F S Sbjct: 441 AEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFYS 498 Query: 518 KEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E V Sbjct: 499 KEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSV 558 Query: 576 YENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 559 YNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGDF 606 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 SL+ L + AP HP +S I + +I+ G + HP ++ L FE Y Sbjct: 607 SLEKLT--TQAP-INHPYQSAKIIQNHKII-GVIAKIHPKVIRELDL------FESYYAE 656 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ D Sbjct: 657 IDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEILPLD 714 Query: 752 VFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 715 IFK-----ESNNSIALSVRCVIYSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|218677705|ref|ZP_03525602.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli CIAT 894] Length = 176 Score = 190 bits (482), Expect = 9e-46, Method: Composition-based stats. Identities = 87/174 (50%), Positives = 121/174 (69%), Gaps = 1/174 (0%) Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 N D+ AD AI EVS YE D PEGQ+ +A GIR+G++ + G+GR WS+ ++ + VD+ Sbjct: 2 NADKGCADVAILEVSGTYEKDRPEGQRRVAGGIRRGTASLAGAGRAWSNAAKGGGKPVDV 61 Query: 619 FDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 FDAKADAL+VIE + + +++ E G P WYHPGRSG IK ++VLGYFGEFHP L+ Sbjct: 62 FDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKMGPKVVLGYFGEFHPLTLEA 121 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 +S +CGFEVYLD++ +KK T+TK + LS V+RD AF+VD+ + +G Sbjct: 122 LDVSGALCGFEVYLDAMAEPKKKATRTKPALELSPFQVVRRDFAFVVDKTVESG 175 >gi|118411054|ref|YP_874449.1| phenylalanine tRNA synthetase [Phaeodactylum tricornutum] gi|125991197|sp|A0T0H4|SYFB_PHATC RecName: Full=Phenylalanyl-tRNA synthetase beta chain, chloroplastic; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|116739801|gb|ABK20672.1| phenylalanine tRNA synthetase [Phaeodactylum tricornutum] Length = 706 Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 169/683 (24%), Positives = 326/683 (47%), Gaps = 62/683 (9%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD-----LDDS 211 +++S T NRSD + ++GI+++ +A+ K ++ C + S+ + K Sbjct: 49 LEISSTANRSDSLSIQGISVE-IASLFNKQPKV---CKYFNSSLNWQQKIKNLTTIRTSK 104 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + C F ++G+ + P W++ +L + G+ ++ LVD NY+ L+ GYP +D + Sbjct: 105 TECLMFTAVILEGLEDLTVPKWIQNKLVSSGIMPLNNLVDFQNYILLETGYPFAFYDLDK 164 Query: 272 I-------SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 + + L++ +A +G + A + Y L ++ ++ SIAGII C Sbjct: 165 VYSKVRTPTFSLSIEKAENGSEFFASNQINYKLDNSIFLVQANNIPISIAGIIENDEIIC 224 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI---- 380 T+ +L+E +++ I + + L I TD R+E+ + +I L ++SL+ Sbjct: 225 HSKTSSLLIEGSIFSASKIRQQSRKLAIRTDRSARYEKSLKSTYLIEALYRLISLLRISN 284 Query: 381 --LSLCGGTASDIC--IARNITYKPRKIVFMNSEVKRLSG---IDVPIEDSLRILERLGF 433 L +++ + + + I + IV + +K+ + I + E L+RL F Sbjct: 285 PSLVYKFHSSNKVLEKVLKPIVLNYKTIVEILGPIKKRTNEHLIYISPETVTDYLKRLNF 344 Query: 434 SVIGEYD--KFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSL 490 + + +EV++PS R D+ + DL+EE+ R++G + + LP + + + S Sbjct: 345 KFLFDSSTLNWEVTIPSIRSDDITREIDLIEEVGRLHGFNNFLT-MLPQIKSVGRADFSY 403 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLP 550 Q + + L + + E++++S +S E + + E++++NP+ +D S +R SLLP Sbjct: 404 QTRKK--ITSYLLNMGLTELIHYSLVSNETFL-----KNEIKLVNPLLSDCSTLRVSLLP 456 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYEN--DTPEGQKYMAAGIRKGSSGIEGSGRLWSDK 608 LL N+ + + FE HV+ +T + GI G + I+ S W +K Sbjct: 457 SLLMTIQENLKQGNSILEGFEYGHVFSGNIETTLTEIEYVGGIF-GGTKIKSS---WFEK 512 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS--WYHPGRSGIIKTSAEIVLGY 666 + + F+AK + + R S + + HP RS I S+ +G Sbjct: 513 GQS----LKWFEAKGKIEKLFQQLNLGIHWRINSQTYTKKFLHPYRSAEIFLSSGKNIGV 568 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVD 725 FG+ HP + + GLS+ I FE+ L+ I S ++ T + S++P + +DL+FI+ Sbjct: 569 FGQLHPLLANKLGLSSEIYLFELNLELIQQSLQQNKLT--IYSQYSVYPKIVKDLSFIIK 626 Query: 726 QHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 ++I L II N + + + D ++G+ + E S+ +Q+ Q K T + +I Sbjct: 627 KNIKFDELEKIIYANGTEFLSQINLLDDYKGEFIPEKHTSLCLQLTFQSNKKTLENKEI- 685 Query: 785 ILMDRIVENVVK----KTNAVLR 803 DRIV+N+ + K A+LR Sbjct: 686 ---DRIVKNLKRVLELKVQAILR 705 >gi|317178644|dbj|BAJ56432.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori F30] Length = 764 Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 216/839 (25%), Positives = 390/839 (46%), Gaps = 112/839 (13%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDTPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--------FAMCCVKG 224 GIA ++ A LK I +++ K DL +LC G + + C Sbjct: 174 GIAREISAFYHTPLKPI--------KALNFTPKSDL--ITLCAGENIESHLAYYLVC--- 220 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 N+ + +L ++S D++N++ + V +A ++ + Sbjct: 221 --NHSLKTPLNVKLSLAHNNALSE-NDLSNFIEFSMHFSGVVMNAYSLN---------TT 268 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 L++ N E +L ++V I R I KH D + +L+E + DPI+++ Sbjct: 269 PIDLSVKNDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLS 321 Query: 345 ---RSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 + K+ + DS YR RG + P L ++ + + T + ++ + Sbjct: 322 LKLHALKDKTLQKDSALIYRSARGSN-----PNLSDGLNFLSAHLKATILESKQTKH-SL 375 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVE 454 K R + F ++ + G+ + E IL+ LGF V + EV P++R D++ Sbjct: 376 KDRTLKFKLEDITEILGLAIEEETIQGILKNLGFKVSIKVSNSKPQILEVVAPNFRHDIK 435 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVN 512 D+ EEILR G+D + S+PL V +K++ + + +K + EV++ Sbjct: 436 TIQDITEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIH 493 Query: 513 WSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++ Sbjct: 494 YVFYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALY 553 Query: 571 EVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 E VY + E QK ++A+G++K S + G+ W F + A+ +S Sbjct: 554 EKGSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSK 601 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 + SL+ L + AP HP +S I + +I+ G + HP ++ L FE Sbjct: 602 VIGDFSLEKLT--TQAP-INHPYQSAKIIQNHKII-GVIAKIHPKVIQELDL------FE 651 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDD 746 Y I + KR ++ S++P RDL I+D++ + +K+ + + Sbjct: 652 SYYAEIDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSE 709 Query: 747 VTVFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + D+F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 710 ILPLDIFK-----ESNNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEVLEKEFNARLK 763 >gi|215445832|ref|ZP_03432584.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] gi|289757755|ref|ZP_06517133.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] gi|289713319|gb|EFD77331.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] Length = 565 Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 164/587 (27%), Positives = 265/587 (45%), Gaps = 65/587 (11%) Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 L+ G+P H D + L VR A SGE + LD E L +V+I D +I G++ Sbjct: 2 LELGHPMHAHDRTGSVGTLEVRFARSGETAVTLDGIERKLDTADVLIVDDAATAAIGGVM 61 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 G ++TDVL+E A+WDP ++R+ + L + +++ R+ER VD + L Sbjct: 62 GAASTEVRADSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCA 121 Query: 378 SLILSLCGGTASDICI-----ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG 432 L+ + GG S + P I R++G+ P + R L ++G Sbjct: 122 RLLADIAGGEVSPTLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIG 181 Query: 433 FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 V + D V+ PSWR D+ + ADLVEE+LR+ G++ I S L R L+ Q Sbjct: 182 AVVTHDGDTLTVTPPSWRPDLRQPADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQ 238 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTS 547 R R + LA +E++ F+ L+G + +LNP+ AD + T+ Sbjct: 239 QRRRTIGSSLALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATT 298 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYE--------------------------NDTP 581 LLP LL+A RNV R + D A+F ++ V + P Sbjct: 299 LLPALLEALVRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLP 358 Query: 582 EGQKYMA---AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-S 637 +++A AG+R+ G G GR D F +A+ +I +D + Sbjct: 359 RQPQHVAAVLAGLRE-PRGPWGPGR--------PVEAADAF----EAVRIIARASRVDVT 405 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPIS 697 LR P +HPGR + E +G+ G+ HP +++ GL C E+ LD+IP S Sbjct: 406 LRPAQYLP--WHPGRCAQVFVG-ESSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCS 462 Query: 698 QKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGK 756 +S V +D++ +V IPA + + ++ L++D+ +FDVF G Sbjct: 463 AP-----LPAPRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGP 517 Query: 757 SLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +GE +KS+ + + T +DD D V++ ++ AVLR Sbjct: 518 QIGEHRKSLTFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLR 564 >gi|317014436|gb|ADU81872.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Gambia94/24] Length = 764 Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 211/837 (25%), Positives = 381/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVDAPKDIAKLCEDLSRLGLEVESC--IPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + ++ ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAKNQFAPVALKGAII--GSTTISKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L +Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELHEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L + +++ + + N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLSVGENIE--------SHLAYYLIYNHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ + L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLNNFIEFSAHFSGVILNAYSLN---------TTPVDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DP++++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPVSLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL S K Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTEHS---------LKDYA 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V E D EV VP++R D++ D Sbjct: 380 LKFQLEDITEILGLAVEAEKIQGILKSLGFKVSAKEPDSKPQILEVIVPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWS 514 + EEILR G+D + S+PL +N + R+ + L +A+ EV+++ Sbjct: 440 IAEEILRFVGIDNLISKPLNCVS---SKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYV 495 Query: 515 FISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY + E QK ++ +G++K S + G+ W S C + D + L++ Sbjct: 556 GSVYNSKREEIQKLGFLISGLQKKESYPDAKGKAWDFYSFAECVSRIIGDFSLEKLTIQT 615 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 P HP +S I + EI+ G + HP ++ L FE Y Sbjct: 616 PI---------------NHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ ++ + +E + K+ NA L+ Sbjct: 712 PLDIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSVVQKALEILEKEFNARLK 763 >gi|46206037|ref|ZP_00047777.2| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 155 Score = 189 bits (480), Expect = 2e-45, Method: Composition-based stats. Identities = 91/154 (59%), Positives = 118/154 (76%) Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 M++RL+A+GLR I+ALVDITNY++ DRG P HVFDA+++ LTVRRA GE ++ALD + Sbjct: 1 MQKRLRAIGLRPINALVDITNYMTFDRGRPLHVFDANKVVGGLTVRRAEDGESLVALDGK 60 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 Y L D VVIA ++SIAGIIGG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LG++ Sbjct: 61 TYRLDSDAVVIADGNGVESIAGIIGGQASGCDETTTDVLIESALWDPRNIARTGRRLGVV 120 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 TD+RYRFERGVD +P L L++ LCGGT Sbjct: 121 TDARYRFERGVDPAFALPGLDLATRLVVDLCGGT 154 >gi|255596489|ref|XP_002536549.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] gi|223519314|gb|EEF25833.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] Length = 171 Score = 189 bits (480), Expect = 2e-45, Method: Composition-based stats. Identities = 88/171 (51%), Positives = 119/171 (69%), Gaps = 1/171 (0%) Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + +++ E G P WYHPGRSG IK ++VLGYFGEFHP+ L+ +S +CGFEVY+D++ Sbjct: 1 MGNIQIEQGGPEWYHPGRSGTIKMGPKVVLGYFGEFHPSTLEALDVSGALCGFEVYVDAM 60 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVF 753 P +KK T+TK + LS+ VKRD AF+VD+ + AG ++ VDR LI V VFD+F Sbjct: 61 PEPKKKATRTKPALELSAFQAVKRDFAFVVDKSVEAGAILKAASGVDRKLITGVNVFDIF 120 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +G SLGEGKKSVAI+V IQP++ T D+D L +I+ +V K T VLRS Sbjct: 121 EGASLGEGKKSVAIEVQIQPVERTLTDEDFEALTQKIIASVTKFTGGVLRS 171 >gi|313682009|ref|YP_004059747.1| phenylalanyl-tRNA synthetase beta subunit [Sulfuricurvum kujiense DSM 16994] gi|313154869|gb|ADR33547.1| phenylalanyl-tRNA synthetase beta subunit [Sulfuricurvum kujiense DSM 16994] Length = 776 Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 218/836 (26%), Positives = 366/836 (43%), Gaps = 93/836 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL + +D TDVS E + TL SIGLEV++ D I V + E++PD D Sbjct: 1 MIVTKNWLNEWIDLTDVSTELLLKTLNSIGLEVDRHDAMRVADGVVIGYVEACEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ GK Q+VCGA NVR G+ A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCQVNVGKEVR-QIVCGASNVRAGIHIALATVGAELP-GGLKIKEAKLRGVESHGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS KE+ L IM L + VG L++Y +D II++ LT NR DC+ + GIA Sbjct: 119 CSSKEIGLPAMGEGIMILDSSIGELVVGKNLNEYSVFNDDIIEIELTANRGDCLSIHGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSE-SIPLEIKFDLDDSSLCKGFAMCCVKG---VRNNVAP 231 DL AA L+E N+ I ++ D+ F+ + G V+ P Sbjct: 179 RDLRAALARPLREKNVKDDQEGRLGIGRILQLQHTDT-----FSTDLLFGAVEVKELSIP 233 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + RL + +A+ + Y + G + + D+ + I+ L Sbjct: 234 LIISIRLAVIEETYATAVDALLKYATHSTGVILRAYPFEKFGDL-------ENKGIITLG 286 Query: 292 NQEYDLSPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS-GKN 349 N E N A G+ + ++ G+ K A + ++E + P I++ G+ Sbjct: 287 NDE------NGYAALYGKEKVAVIGVSQEKEAHFSADDGLAVIEASYIAPDVISQKMGEK 340 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI----TYKPRKIV 405 YR RG + P ++ + L +S NI TY+PR I Sbjct: 341 KVPSCPHYYRTSRGSE-----PSIEMGIRYAAELFEKYSSSQVYGGNIELTTTYEPRIIS 395 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEI 463 + +E + G+ + +I + LG IG + F +SVP +R D+ K D++EEI Sbjct: 396 MVEAEFESFIGLKIDKTRITQIFKNLGLD-IGKPKGSTFAISVPKFRHDIVNKQDIIEEI 454 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 +RI G+D I S+PL + + +TR + A E V++ F + Q Sbjct: 455 VRIIGIDNIPSKPLSFAEANQMSTDLAEYKKTRLYRHRAAQSGFYESVHFVFNERIQVEK 514 Query: 524 FG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 +G + E+LNPI+A +R +LL GLL + NV A+FE V++ D Sbjct: 515 YGFVCTEASKELLNPITATFDTLRPTLLVGLLNSASANVKVNQKKIALFETGMVFDADRH 574 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE--PFVSL---- 635 E ++ G SG + S+K A + SVI+ F L Sbjct: 575 ETKRI----------GFIVSGAMESEKI-----------ANSGKPSVIDFAAFTKLIADV 613 Query: 636 -DSLRFESGAP--SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYL 691 S S P S HP + + + G HP + + F L+ +C E+ + Sbjct: 614 AGSFELVSHMPDHSLAHPYVCAKVLING-VEAGELFRLHPQVEEEFDLAQTFMC--ELKM 670 Query: 692 DSIP---ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDV 747 D++P I K +K + RDL+ ++ + + ++ +I K+ + Sbjct: 671 DALPYGLIEAKPYSKYQASF---------RDLSVLISKEVSYESIKAVINKHASAQVRRF 721 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D + ++LG+ + S+ ++ ++Q + T ++DI M+ I+ + ++ A LR Sbjct: 722 YPVDRYVSENLGD-QMSLTLRFVLQSDEKTLEEEDINAAMEWILSGLREELGAGLR 776 >gi|154173758|ref|YP_001407855.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter curvus 525.92] gi|112803413|gb|EAU00757.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter curvus 525.92] Length = 778 Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 209/848 (24%), Positives = 373/848 (43%), Gaps = 115/848 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M + WL + +D +++S EK+ TL SIGLEV+ + + V + E++PD D Sbjct: 1 MIISKHWLNEWVDISEISGEKLLKTLNSIGLEVDSYKEIKLPDSIVVGYVKNKEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D GK + +Q+VCGA NV G A G+ +P N + + K+RG+ES GM+ Sbjct: 61 KLNVCQVDVGK-ETLQIVCGAKNVEAGQFVPVALIGTVMP-NGLEIKKAKLRGVESCGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-----RLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL + + I LP+D VG L+++ D II++ +T NR DC + G Sbjct: 119 CSSTELGMVKVNDGI--LPLDESVGNLKLGVSLNEFDVFKDIIIEIDVTANRGDCQSMHG 176 Query: 174 IALDLVAA------------------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK 215 +A ++ AA G+G++ + + + + S L + Sbjct: 177 VAREICAALDLNLRDNLLYEDADNLLGIGRI-------------VSVRAEDGVRGSFLYR 223 Query: 216 GFAMCCVKGVRNNVAPNWM-RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD 274 F +++ ++ N + R RL + + + + +Y+S G +D +++ Sbjct: 224 AFE------IKSTISENLLTRMRLALIECKKEGIIERLLDYMSYCTGVLFRAYDFAKLGS 277 Query: 275 -----VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 + ++ +GE VV D + +AGI D+++ Sbjct: 278 DDERIMFDIKNGKNGE---------------CVVFCGDKNL-GVAGIYQSDEGRVDESSK 321 Query: 330 DVLVEVALWDPINIAR---SGKNLGIITDSRYRFERGVD---LQGMIPVLKHIVSL--IL 381 +++E +P IAR K+L D YR RG + G K + + + Sbjct: 322 LIVLEANYTEPSVIARIIGEDKDLPR-GDQIYRSSRGSEPNLAYGADYFFKRLSNYKDAV 380 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG---E 438 L G+ I + +P I +E+K + G +V D ++IL++LGF V G E Sbjct: 381 GLYAGSQHSI-----LRKEPATINVSLNELKNMIGQEVARNDVVKILKKLGFEV-GVNVE 434 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 + V PS+R D+ D+ EEI+RI G+D I S PL + ++ + + Sbjct: 435 QESINVKAPSFRHDILNLHDICEEIVRIVGIDNIASTPLVFAEQNRLMPTYIKYKNSLNL 494 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 +R A E V++ F S E+ G ++ ILNPI+ +++ +R +L+ LL + R Sbjct: 495 RRKAADCGFFESVHYVFDSLEELGKLGFAPCKVAILNPINNELNTLRPTLVNHLLNSCER 554 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 N+ + +FE+ V++ + E + + G K S I G+ K EE +V Sbjct: 555 NIKNSKKSVKLFELGEVFDENAKESLRVGFALCGQAKEPSLINGA------KGEEAGFYV 608 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILD 676 F + +VI F L + S+ P II + E + GY G + + Sbjct: 609 --FASMVQ--NVIGKFTLLPDDKI-----SYLSPYEQAIICQNGEKI-GYMGRVDIKVQN 658 Query: 677 FFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI 736 L + Y+ I K K + + S + RDL+ IV + Sbjct: 659 SHDLP------KTYICEIDFEAMKFNKIEAKPY-SKFPSISRDLSLIVPDGFEFAKIYEC 711 Query: 737 IKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I+ ++ + + + D+++G L E SV+++ Q + T D+++ +LMD+I+ + Sbjct: 712 IRGLNLKELKEFLPVDIYRGAGL-ENSASVSLKFTFQDMDKTLEDEEVGVLMDKILSELK 770 Query: 796 KKTNAVLR 803 K N +R Sbjct: 771 TKLNIGIR 778 >gi|39939084|ref|NP_950850.1| phenylalanyl-tRNA synthetase beta subunit [Onion yellows phytoplasma OY-M] gi|39722193|dbj|BAD04683.1| phenylalanyl-tRNA synthetase beta subunit [Onion yellows phytoplasma OY-M] Length = 642 Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 160/622 (25%), Positives = 282/622 (45%), Gaps = 53/622 (8%) Query: 201 PLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDR 260 PL+++ + D C + C ++ ++ +P W+R L G+ I+ +VDITN + ++ Sbjct: 55 PLKVQIENDS---CYEYNACILENIKIKPSPLWLRNALLQSGINPINNVVDITNLILIEY 111 Query: 261 GYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 G P H FD+ I + VR+A E I L+ ++ L +++VI + ++AGI+G Sbjct: 112 GIPLHAFDSENIKQI-KVRKALPQENITTLNQNDFVLDENDLVITDGKKAIALAGIVGLL 170 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSL 379 + TT +++E A + P IA++ + L T+S RFERG+D Q +IP+ + L Sbjct: 171 ESSIKPTTTKIILEAAYFSPQTIAQTCQKLKTKTESSLRFERGID-QSLIPLAFQKACQL 229 Query: 380 ILSLCGG------------TASDICIARNITYKPRKI--VFMNSEVKR-LSGIDVPIEDS 424 +++L G ++ I+ N+ + RKI +++K L +D I S Sbjct: 230 LVTLADGKITYQPVITKQKNRTNPTISLNLDFVTRKIGVSLCPTQIKNWLLNLDYQIHTS 289 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 + LG + ++ + P R DV+ K D++ ++ R+YG ++ P Q+ Sbjct: 290 ----KHLGPQ--NKNEQLNLQAPLRRYDVKIKEDVISDLTRLYGCHKL---PPQTIQIPT 340 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNM 544 + L+L+Q R ++++L + E + +S IS E F + ++I+NP+S D + Sbjct: 341 QGKLTLKQKNIRELRKLLVNLGFYETITYSLISSEMFEAFTPQKPFIKIMNPLSQDKMIL 400 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL 604 R SLL L++ R D A FE+ Y P + A G L Sbjct: 401 RQSLLSSLVEVLSYQHKRQTFDTAFFEIGKTY---FPNQETLSLAFALNG----HFLNSL 453 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 W + FV L I F+ + ++ S +HPG + + +I+ Sbjct: 454 WHKQDVSSSFFVT-----KGILEKISAFLGITLTYQKTQQHSNFHPGMQANLLFNNQII- 507 Query: 665 GYFGEFHPNILDFFGLSNP-ICGFEVYL-DSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 G G+ HP + + L +C E++L D I TKT + V RDLAF Sbjct: 508 GVIGKTHPQLNTKYHLKESFLC--ELFLTDEI----LNTTKTFTFQPIPKFPTVIRDLAF 561 Query: 723 IVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 +VD + IK + +FDV+Q E K S+A+++ L Sbjct: 562 LVDTKYSFYQIEQTIKQTTPFDLIKCELFDVYQIPKTKE-KHSLALRLFFHNLDKNLEKQ 620 Query: 782 DIRILMDRIVENVVKKTNAVLR 803 D+ M++I N++K + +R Sbjct: 621 DVEHCMEKITSNLIKHFHIEIR 642 >gi|261749645|ref|YP_003257331.1| phenylalanyl-tRNA synthetase subunit beta [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497738|gb|ACX84188.1| phenylalanyl-tRNA synthetase beta subunit [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 643 Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 174/666 (26%), Positives = 307/666 (46%), Gaps = 64/666 (9%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIP----LEIKFDLDDSS 212 +DV +TPNRSD + GIA DL A + ++S P+ S + +++ + Sbjct: 1 MDVEITPNRSDAMSHYGIARDLYAVLTFRGYRTHLSKPIISNYQKDINKYRFQISIEEKN 60 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 C+ F+ + + N +PNW+ +L+++G++ I+ ++DITN+V + G P VFD +I Sbjct: 61 KCRRFSGLILSKIEINSSPNWLNNQLESIGIKPINNIIDITNFVMNELGQPIQVFDMDQI 120 Query: 273 S-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 L ++ + + DN++ L+ + +I+ + SIAGII + + T ++ Sbjct: 121 EGKSLIIKNVKNKIYFNSEDNRKRILNEKDFIISDKIKPLSIAGIINETNLNVNIKTKNI 180 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG-GTASD 390 + A ++P++I G I TD+R+RFERGVD + L+ LI + +SD Sbjct: 181 FLGCAYFNPVDIRSIGIRHMIKTDARFRFERGVDPNLTVYALQRTALLIKEVTKCNISSD 240 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSW 449 I P I ++ L G + ++ +IL L ++ E K V VP + Sbjct: 241 IMDIYPNPIDPSTIKLRYQKIHDLIGKKISEKNIKKILLLLEIVILDENKKSLLVLVPPY 300 Query: 450 RQDVEEKADLVEEILRIYGVDQIK------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 R DV+ + DL+EEILRIYG+ QIK PLP + K + + + L Sbjct: 301 RIDVQREVDLIEEILRIYGLTQIKISKKIQISPLPNFFYKTKEKIQ------KTIFNQLV 354 Query: 504 SRAMMEVVNWSFISKEQSVLFGGG---QRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 + E++N I+K + L + E+ ILNP++ ++MR+SLL G++ + N Sbjct: 355 NYGFQEIINPPIINKNKDSLLLNSFFKREEIRILNPVNKSYNSMRSSLLFGMINSIKHNY 414 Query: 561 DRAIADFAIFEVSHVYENDTPEGQKYMAAGI----RKGSSGIEGSGRLWSDKS---EERC 613 +R FE+ +Y + + I + + IE L+ D E+ Sbjct: 415 NRGNQKIKFFEIGKIYYKSNNQFLEKTCLSIALSEKDQNKIIEPKSSLFFDLKGIIEQIF 474 Query: 614 RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 + + +F ++ I PF+ R I L G+ N Sbjct: 475 QRIGIFH--YTQINSIHPFL------------------RESIFIKYKNKNLVELGKLKEN 514 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS-SLHPV-KRDLAFIVDQHIPAG 731 + + +E YL SI + KKV+ + S +P KRDL+F+VD+ I Sbjct: 515 LFKKQEVFYAEINWE-YLISI-------IQKKKVIFIPFSKYPTSKRDLSFLVDKTISFE 566 Query: 732 TLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + +IK ++ LI + ++D+++GK L + KKS I + + T D ++MD + Sbjct: 567 KIYQLIKEKEKNLIKKIKIYDLYEGKDLPKEKKSYTISFFFESQEGTLTD----LMMDEV 622 Query: 791 VENVVK 796 ++ + K Sbjct: 623 MKKIEK 628 >gi|308062327|gb|ADO04215.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Cuz20] Length = 764 Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 219/835 (26%), Positives = 391/835 (46%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDAPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L +++ S L + + C N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLHAGENIE-SHL--AYYLIC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + V +A + D + L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLNNFIEFSMHFSGVVMNAYSL-DATPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRA 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ + E IL+ LGF V I E + EV VP++R D++ D Sbjct: 380 LKFKLEDITEILGLAIEEEKIQGILKNLGFKVGIKEPNSKPQILEVVVPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EV+++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFY 497 Query: 517 SKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 558 VYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGD 605 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL+ L + AP HP +S I + EI+ G + HP ++ L FE Y Sbjct: 606 FSLEKLT--TQAP-INHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESDNTIALSVRCVIYSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|86150189|ref|ZP_01068416.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839305|gb|EAQ56567.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni CF93-6] gi|284926130|gb|ADC28482.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni IA3902] Length = 773 Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 215/840 (25%), Positives = 384/840 (45%), Gaps = 104/840 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-EILQIVCGAANVDAGQFVTVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL AA LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLAAALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIGLKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASD 390 DP+ IA K D + YR RG + + ++ + + I +L++ ++ Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIY---SSSQQ 386 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPS 448 I + + P I + + G +V ++ L+IL++LGF +I GE V P Sbjct: 387 ILTDKELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPL 441 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASR 505 R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS Sbjct: 442 HRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS- 498 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 499 GYFESLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKK 558 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ + E + I SG++ ++ + E +F D D Sbjct: 559 IIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDI 610 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-I 684 ++I F + +S + P I S +I +G+ G H I + L I Sbjct: 611 KNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYI 663 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 C E+ LD I R K S + RDL+ ++ + + N I+ ++ + Sbjct: 664 C--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEI 715 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 716 LENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 773 >gi|307637714|gb|ADN80164.1| Phenyl alanyl-tRNA synthetase beta chain [Helicobacter pylori 908] gi|325996317|gb|ADZ51722.1| Phenylalanyl-tRNA synthetase beta chain [Helicobacter pylori 2018] gi|325997906|gb|ADZ50114.1| Phenylalanyl-tRNA synthetase beta chain [Helicobacter pylori 2017] Length = 764 Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 211/838 (25%), Positives = 385/838 (45%), Gaps = 110/838 (13%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNIFVDTPKDIAKLCEDLSRLGLEVESC--IPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + +VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLPIVCGAKNVAPNQFAPVALKGAII--GSTTIAKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L +Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSTELGFPKINDGILEL--DESVGELVLGKELHEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L + +++ + + N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLSVGENIE--------SHLAYYLIYNHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ + L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLNNFIEFSTHFSGVILNAYSLN---------TTPVDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYSDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 + + DS YR RG + P L ++ + + T + ++ + K + F Sbjct: 329 DKTLQKDSALIYRSARGSN-----PNLSDGLNFLSTQLKATILESKQTKH-SLKDHALKF 382 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADLVE 461 ++ + G+ + E IL+ LGF V + EV VP++R D++ D+ E Sbjct: 383 QLEDITEILGLVIEAEKIQGILKNLGFKVSAKEPNSKPQILEVIVPNFRHDIKTIQDIAE 442 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKRVLASRAMMEVVNW 513 EILR G+D + S+PL ++S + S Y +K + EV+++ Sbjct: 443 EILRFVGIDNLISKPL--------DSISSKHSNPHYDTHRFFENLKHKALACGFKEVIHY 494 Query: 514 SFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 F SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 495 VFYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYE 554 Query: 572 VSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 VY + E QK ++ +G++K S + G+ W F + A+ +S I Sbjct: 555 KGSVYNSKREEIQKLGFLISGLQKKESYPDAKGKAWD------------FYSFAECVSRI 602 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 SL+ L ++ P HP +S I + E V+G + HP ++ + L FE Sbjct: 603 IGDFSLEKL--DTQTP-INHPYQSAKIIQNNE-VIGVIAKIHPKVIQEWDL------FES 652 Query: 690 YLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 Y I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 653 YYAEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSEI 710 Query: 748 TVFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 711 LPLDIFK-----ESDNTIALSVRCMIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|188527833|ref|YP_001910520.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] gi|188144073|gb|ACD48490.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Shi470] Length = 764 Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 215/835 (25%), Positives = 387/835 (46%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P ++V +E+ P + Sbjct: 1 MKLSVNDLSVFVDTPKDIAKLCEDLSRLGLEVESC--IPCVAPKSVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RGIES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGIESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L +++ S L + + C ++ ++ Sbjct: 174 GIAREVSAFYHTPLKPIKALNFTPKSDLITLHAGENIE-SHL--AYYLICNHSLKTPLSV 230 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 A+ D+ N++ + V +A + D + L++ Sbjct: 231 KLSLAHNNALSEN------DLNNFIEFSTHFSGVVMNAYSL-DATPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I K+ D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKYQDQKDLSECLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ + E IL+ LGF V + EV P++R D++ D Sbjct: 380 LKFKLEDITEILGLAIEEEKIQGILKNLGFKVSAKVPNSKPQILEVVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EV+++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFY 497 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 558 VYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGD 605 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL+ L + AP HP +S I + EI+ G + HP ++ L FE Y Sbjct: 606 FSLEKLT--TQAP-INHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|283778173|ref|YP_003368928.1| phenylalanyl-tRNA synthetase, beta subunit [Pirellula staleyi DSM 6068] gi|283436626|gb|ADB15068.1| phenylalanyl-tRNA synthetase, beta subunit [Pirellula staleyi DSM 6068] Length = 684 Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 165/665 (24%), Positives = 297/665 (44%), Gaps = 40/665 (6%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IKFDLDDSS 212 D ID+ +T NR DC+G GIA + L N S +S+ + ++ Sbjct: 42 DFAIDLEVTSNRPDCLGHHGIAREAAVLYGVPLTIPNPRPKSSDKSLATSLVNVIVECPD 101 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 L + V+GV+ +P WM+ RL+ +G+ ++ +VDITNYV ++ G P H FD +++ Sbjct: 102 LAPQYIARVVRGVKIKPSPEWMQSRLRTLGIGVVNNVVDITNYVLMECGQPLHAFDLAKL 161 Query: 273 S-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDV 331 + + VRRA SGE I A+D++ Y L P VIA + +IAG++GG + + T D+ Sbjct: 162 AKQTIIVRRAKSGETITAIDHRSYALDPAMCVIADGEKPIAIAGVMGGADSEVSEGTRDI 221 Query: 332 LVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI 391 ++E A + P+++ + + L + + S YRFERGVD +G+ + L++ L GG ++ Sbjct: 222 VIEAARFAPLSVRTTARKLTLKSPSSYRFERGVDPEGVDWASRRCAELLIDLAGGELAEG 281 Query: 392 CIARNITYKPRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSW 449 + +I + V + S+VKR+ GI++ + RI+ LG + + PSW Sbjct: 282 VVDVSIANPKQPAVTLRFSQVKRVLGIEIAPTEIRRIITALGCTEQNLSTESITTIAPSW 341 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSE---PLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 R+D+ + DLVEE+ RI+G + I + P+ + D + L++ V+ V+ Sbjct: 342 RRDLTREIDLVEEVARIHGYEHIPEDARVPMAASHKSDADRV-LEK-----VRSVMTGSG 395 Query: 507 MMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E + S + + S L P+ +R S++P LL A N + Sbjct: 396 YSEALTASVVPESWSNTISPWSTAEPLVAATPMLKGADRLRRSVIPSLLDARRINESLSN 455 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 D +FE + +Y +D A + + W+ + F+ + Sbjct: 456 PDCQLFETARIYLSDALVASDSAATTVPRLPQ------EQWTLTAVSGGDFLSVKGVAES 509 Query: 625 ALSVIEPF--VSLDSLRFESGAPSWYHPGRSGIIKTSAEI---VLGYFGEFHPNILDFFG 679 + I P +++ L+ HP + + + +LG G L FG Sbjct: 510 LVEAINPAAKITISDLK---------HPLMTRYQYVALHLDGQLLGVIGSLSAEGLKTFG 560 Query: 680 LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK- 738 L E+ S+ + K K K LS RD+ IVD+ + L ++++ Sbjct: 561 LREKTTVLEI---SLSLLAKHAVKIAKFSPLSPYPATTRDVNLIVDEPLRWQQLESVVRA 617 Query: 739 NVDRLIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 ++ + D ++ + GE KK + ++ T + + DR++ + Sbjct: 618 AAGPALETLEYRDTYRDTARDGENKKRILFSFSLRGTDGTLTAAEADTIRDRLIAAATTQ 677 Query: 798 TNAVL 802 +A L Sbjct: 678 LSAKL 682 >gi|86153444|ref|ZP_01071648.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] gi|85843170|gb|EAQ60381.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni HB93-13] Length = 773 Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 215/840 (25%), Positives = 384/840 (45%), Gaps = 104/840 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL AA LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLAAALNLNLKE---PKPFKESENVLGIGRILCLAAEKELNGLYNYRAIGLKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASD 390 DP+ IA K D + YR RG + + ++ + + I +L++ ++ Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIY---SSSQQ 386 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPS 448 I + + P I + + G +V ++ L+IL++LGF +I GE V P Sbjct: 387 ILTDKELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPL 441 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASR 505 R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS Sbjct: 442 HRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS- 498 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 499 GYFESLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKK 558 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ + E + I SG++ ++ + E +F D D Sbjct: 559 IIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDI 610 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPI 684 ++I F + +S + P I S +I +G+ G H I + L I Sbjct: 611 KNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYI 663 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 C E+ LD I R K S + RDL+ ++ + + N I+ ++ + Sbjct: 664 C--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEI 715 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 716 LENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 773 >gi|308184790|ref|YP_003928923.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] gi|308060710|gb|ADO02606.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori SJM180] Length = 764 Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust. Identities = 212/834 (25%), Positives = 383/834 (45%), Gaps = 102/834 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVNTPKDIAKLCEDLSRLGLEVESC--TPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + +VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLPIVCGAKNVAPNQFVPVALKGAII--GSTPIAKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L +Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELHEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L + +++ S L + + C N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLSVGENIE-SHL--AYYLIC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLNNFIEFSVHFSGVILNAYSLNKT---------PMDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI-----ARS 346 N E +L ++V I R I KH D + +L+E + DP+++ A Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPVSLSLKLHALK 328 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF 406 K L YR RG + P L ++ + + T + + + K R + F Sbjct: 329 DKTLQKDNALVYRSARGSN-----PNLSDGLNFLSAQLKATILESKQTEH-SLKDRTLKF 382 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKADLVE 461 ++ + G+ + E IL+ LGF + + E + E+ VP++R D++ D+ E Sbjct: 383 QLEDITEILGLVIEAEKIQGILKSLGFKISVKEPNSKPQILEIIVPNFRHDIKTIQDIAE 442 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSFIS 517 EILR G+D + S+P +N + R+ + L +A+ EV+++ F S Sbjct: 443 EILRFVGIDNLISKPF---HCISSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYVFYS 498 Query: 518 KE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE Q + F + LE+ NPI+ D++ +RTSL+ GLL A+ RN + A++E V Sbjct: 499 KEKQQKLGFEVLEDPLELQNPITTDLNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSV 558 Query: 576 YENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E QK ++ +G++K S + G+ W F + A+ +S I Sbjct: 559 YNSKREEIQKLGFLVSGLQKKESYPDAKGKAWD------------FYSFAECVSRIIGDF 606 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 SL+ L + HP +S I + EI+ G + HP ++ L FE Y Sbjct: 607 SLEKL---TAQTPINHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESYYAE 656 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ D Sbjct: 657 IDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPLD 714 Query: 752 VFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 715 IFK-----ESHNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|57242237|ref|ZP_00370176.1| phenylalanyl-tRNA synthetase, beta subunit, putative [Campylobacter upsaliensis RM3195] gi|57016917|gb|EAL53699.1| phenylalanyl-tRNA synthetase, beta subunit, putative [Campylobacter upsaliensis RM3195] Length = 773 Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 203/820 (24%), Positives = 390/820 (47%), Gaps = 85/820 (10%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL + ++ D +LE + TL SIGLEV+K + +A + + +V+ ++ + + Sbjct: 1 MIITRTWLSEWVNIDDKNLELLVKTLNSIGLEVDKAYSLKAPNNVVVGQVIEKFKHENAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGA NV A G+ +P N + + K+RG+ES GM+ Sbjct: 61 KLSVCKVDIGT-EILQIVCGAANVAQNQFVAVALNGAKMP-NGLEIQKAKLRGVESNGML 118 Query: 119 CSEKELML--SDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL ++D I++ I + +G L+ Y +D I++ LTPNR DC+ V G+A Sbjct: 119 CSSVELGFGKTNDGILILDESIGELELGRELNSYDIFNDEFIEIELTPNRGDCLSVYGVA 178 Query: 176 LDLVAA---GLGKLKEINISCPLSSES-------IPLEIKFDLDDSSLCKGFAMCCVKGV 225 DL A L + KE SE+ + L + DL+ + K F + + + Sbjct: 179 RDLAVALELDLNEKKEFK-----ESENALGIGRILRLGVTRDLNSLLMYKAFELK--EEL 231 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 N + N RL L S +++ ++ NY + G + +D ++ + + E Sbjct: 232 HNKLLINL---RLAQAELLSQNSIENLLNYATHSTGVLFNAYDFDKL-------KKSNEE 281 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR 345 L +E I+ SI+GI + CD+ T V++E DP IA+ Sbjct: 282 LNFVLSKEE----QGETKISCQEEFLSISGIYQNANLKCDEKTKIVILEAHYTDPSIIAQ 337 Query: 346 S-GKNLGIITDSRYRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKP 401 S GK + + YR RG + + GM +L+ I ++ + ++ + + YK Sbjct: 338 SKGKYQKVDEKTFYRSFRGSEPKLNIGMDFLLQQIATIQNVMIYNSSQQV-----LDYKK 392 Query: 402 RKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADL 459 +I+ ++ E + G ++ ++ L+IL++LGF ++ D + VP R D++ D+ Sbjct: 393 EQIITISIETINNTIGQNIDKDEILKILKKLGFELLLSNDGLINIKVPLHRNDIKNIFDI 452 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWS 514 EEI+RI G+D I S+ L + +N L Q+ Y +++ + E +++ Sbjct: 453 CEEIVRIVGIDNIISKGLEFVE----KN-HLNQTYKDYKELLNLRQNAVNNGYFESLHYV 507 Query: 515 FISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 ++++ +FG + L+++NPI+ +++ +R++LL LL A N + +F+ Sbjct: 508 LDNEKELEIFGFDKLGLKLINPITEELNTLRSTLLNQLLNAASLNAKNSQKIIKLFQSGA 567 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 V+ + + + A I SG + ++ S+K+ + V+ +D D +++E F Sbjct: 568 VF--NAKNEELHHIAFIH---SGFKEEAKI-SNKA--KPALVNFYDFLLDMRNILEEF-E 618 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDS 693 L + F +P ++ I K + +I G+ G H N+ LS +C ++ L Sbjct: 619 LKASNFHFLSPY----EQAYIYKNNQKI--GFLGRVHLNLETQKDLSKSYVCELDLTL-- 670 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDV 752 K K K S V RDL+ +V ++ P T+ I+ + +++ + D+ Sbjct: 671 ----LKNEVKVAKAY--SKFPKVSRDLSILVPKNFPYETIKETIQKLHLADLENFRLIDL 724 Query: 753 FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + ++L + S+ + + L+ T D +I ++ I++ Sbjct: 725 YSDENLKD-LYSLTLNFNFKSLEKTLEDKEINAYLETILK 763 >gi|213649076|ref|ZP_03379129.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. J185] Length = 463 Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 142/484 (29%), Positives = 234/484 (48%), Gaps = 35/484 (7%) Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A ++P++I + G+ TD+ +R+ERGVD ++ L+L +CGG A I Sbjct: 1 MECAYFNPLSITGRARRHGLHTDASHRYERGVDPALQYKTIERATRLLLDICGGDAGPII 60 Query: 393 IARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 N P++ I S++ RL G + E IL RLG V D+++ P+WR Sbjct: 61 DVSNEATLPKRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWR 120 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 D+E + DLVEE+ R+YG + I EP+ + + +LSL++ VK +L + Sbjct: 121 FDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKR-----VKTMLNDKGY 175 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 EV+ +SF+ + L G L + NPIS +MS MR SL GLL N +R Sbjct: 176 QEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRV 235 Query: 568 AIFEVSHVYENDTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 IFE + DT Q M AG+ G+ E W+ E VD +D K Sbjct: 236 RIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEH----WNLAKET----VDFYDLKG 287 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 D +V++ L ++F++ HPG+S I E + G+ G HP + L+ Sbjct: 288 DLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGR 346 Query: 684 ICGFEVYLDSIP---ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN- 739 FE+ + + + Q + +S +RD+A +V +++PA +++ K Sbjct: 347 TLVFELEWNKLADRIVPQAR--------EISRFPANRRDIAVVVAENVPAADILSECKKV 398 Query: 740 VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + V +FDV++GK + EG KS+AI +++Q T +++I + + VE + ++ Sbjct: 399 GVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQ 458 Query: 800 AVLR 803 A LR Sbjct: 459 ASLR 462 >gi|11465812|ref|NP_053956.1| phenylalanyl-tRNA synthetase beta chain [Porphyra purpurea] gi|1711629|sp|P51346|SYFB_PORPU RecName: Full=Phenylalanyl-tRNA synthetase beta chain, chloroplastic; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1276812|gb|AAC08232.1| phenylalanine tRNA synthetase [Porphyra purpurea] Length = 720 Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 173/693 (24%), Positives = 327/693 (47%), Gaps = 84/693 (12%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALD---LVAAGLGKLKEI-------NISCPLSSESIPLE 203 D I+DV+ T NRSD + + G++ + L A + K +I NIS +S Sbjct: 68 DYILDVTSTANRSDVLSMIGLSREVSALTQADIVKTADIPSAGLFDNISTIIS------- 120 Query: 204 IKFDLDDSSL-CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 DDS L C + + + +P W++ RL + G S + ++DI+NY+ L G Sbjct: 121 -----DDSLLNCSYYVSAIMDNIVIQDSPKWLKNRLYSCGFISQNLIIDISNYIMLKWGQ 175 Query: 263 PSHVFDASRISDV-------LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAG 315 P ++ D +I+D +T S +K + LDN++ LS D ++ + I SIAG Sbjct: 176 PINIIDLKKIADTNTESYIEITSNFCSSKQKSVKLDNKDIALSRDVLITQINNNITSIAG 235 Query: 316 IIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKH 375 I + D NT + +E A++ + +S +++GI T+S R ERG+++ + Sbjct: 236 IGINQEFHVDQNTKLIFIEAAIFKEAVVRKSSRSIGIRTESSIRQERGLNIDNGRSAYRE 295 Query: 376 IVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRI-------- 427 +SL++ L G + + I + +K++ + PI+D+ + Sbjct: 296 TLSLLIELTHGKVKATFLKKETENSTLNI---DISLKKIQDVLGPIKDNHTVRFLSFDEI 352 Query: 428 ---LERLGFSVI-GEYDKFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 L+ L F + + KF V +PS+R+ DV + D+VEEI R+YG +Q +S+ + ++ Sbjct: 353 ENTLKSLQFKITKKDVKKFNVIIPSYRKYDVFREIDIVEEIARVYGYNQFQSK---IPKI 409 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMS 542 + ++ S +++ ++ +L + + E+V++S + + E+ + NP+ D S Sbjct: 410 QFTKHPSSRRNFIDQIRNILRNLGLTELVHYSLVK---------SKGEINLKNPLIKDYS 460 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE---NDTPEGQKYMAAGIRKGSSGIE 599 +R+SLL GL+ A+ N+ ++ FE+ V+ N E K A I GS I Sbjct: 461 TLRSSLLEGLINASAYNIKQSNQTVDGFEIGTVFNLKRNKIIETTK--LAIILGGSLDIR 518 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV-----SLDSLRFESGAP--SWYHPGR 652 WS E ++ ++AK +IE F S+ ++ ES ++ + Sbjct: 519 SE---WS----EPAHSLNWYEAKG----IIENFFRKLNKSIQWVKRESSNDQINFIQNNK 567 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSS 712 S + + + + G FGE + FG + + E+ LD + S + + S Sbjct: 568 SATLTYNNDNI-GLFGELNELTSSQFGFNTELFVLEIDLDILQYSDPEINYLSYRIQPYS 626 Query: 713 LHP-VKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 +P + RDL ++ + + +L ++ D ++++T+FD + K LG GKKS+ ++ Sbjct: 627 KYPCITRDLCIVIPKKMQINSLFQLLNQFNDNDLENMTLFDQYSNKLLGNGKKSIGLRFT 686 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T + +I + + +N++KK N +R Sbjct: 687 YRSDHKTLTNLEIDNKQNELQKNIIKKLNLEIR 719 >gi|157415153|ref|YP_001482409.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81116] gi|157386117|gb|ABV52432.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 81116] gi|307747796|gb|ADN91066.1| Phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni M1] Length = 773 Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 216/844 (25%), Positives = 381/844 (45%), Gaps = 112/844 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL A LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLATALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 DP+ IA K D + YR RG + P L + +LS+ I Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSE-----PKLNLGMDFLLSIFEQ------IPNL 378 Query: 397 ITYKPRKIVFMNSEVKR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEV 444 + Y + + + E+ + G +V ++ L+IL++LGF +I GE V Sbjct: 379 VIYSSSQQILTDKELPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINV 437 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRV 501 P R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR Sbjct: 438 KAPLHRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRA 495 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +AS E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N Sbjct: 496 VAS-GYFESLHYVLDNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAK 554 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + +FE+ V+ + E + I SG++ ++ + E +F D Sbjct: 555 NSKKIIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL-- 607 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL- 680 D ++I F + +S + P I S +I +G+ G H I + L Sbjct: 608 -LDIKNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLP 659 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 IC E+ LD I R K S + RDL+ ++ + + N I+ + Sbjct: 660 KTYIC--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEEL 711 Query: 741 D-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + ++++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K Sbjct: 712 NLEILENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLG 769 Query: 800 AVLR 803 LR Sbjct: 770 LDLR 773 >gi|217034332|ref|ZP_03439748.1| hypothetical protein HP9810_491g25 [Helicobacter pylori 98-10] gi|216943217|gb|EEC22684.1| hypothetical protein HP9810_491g25 [Helicobacter pylori 98-10] Length = 764 Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 213/834 (25%), Positives = 384/834 (46%), Gaps = 102/834 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDTPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESYGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA ++ A LK I + + +S + + D + S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIK-ALNFTPKSDLITLCADENIESHLAYYLVC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + V +A + D + L++ N Sbjct: 227 PLNVKLSLAHNNALSE-NDLNNFIEFSVHFSGVVMNAYSL-DATPID--------LSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I R I KH D + +L+E + DPI+++ + K+ Sbjct: 277 DENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL K R + Sbjct: 330 KTLQKDNALIYRSTRGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRTL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ + E IL+ LGF V + EV VP++R D++ D+ Sbjct: 381 KFKLEDITEILGLAIEEETIQGILKNLGFKVSIKVSNSKPQILEVVVPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFIS 517 EEILR G+D + S+PL V +K++ + + +K + EV+++ F S Sbjct: 441 AEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFYS 498 Query: 518 KEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E V Sbjct: 499 KEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSV 558 Query: 576 YENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 559 YNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGDF 606 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 SL+ L + AP HP +S I + +I+ G + HP ++ L FE Y Sbjct: 607 SLEKLT--TQAP-INHPYQSAKIIQNHKII-GVIAKIHPKVIQELDL------FESYYAE 656 Query: 694 IPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFD 751 I + KR ++ S++P RDL I+D++ + +K+ + ++ D Sbjct: 657 IDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPLD 714 Query: 752 VFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 715 IFK-----ENDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|288960336|ref|YP_003450676.1| phenylalanyl-tRNA synthetase beta chain [Azospirillum sp. B510] gi|288912644|dbj|BAI74132.1| phenylalanyl-tRNA synthetase beta chain [Azospirillum sp. B510] Length = 784 Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 171/594 (28%), Positives = 272/594 (45%), Gaps = 45/594 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M +L+WL DH+D T ++ E I + LT EVE + + S F +V + R D Sbjct: 1 MLISLNWLGDHVDLTGLAPEGIAERLTVSCAEVEGLTEVKIASDFAVVARILAARPIDGG 60 Query: 60 CAILRIDTGKHQEIQVV-CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 L ++ G Q + + AP + G + PPG P G G + Sbjct: 61 LE-LELNAGGGQRVTLRHAAAPGLAEGRHVAYGPPGFPWPNG----------GECREGGL 109 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV--SLTPNRSDCIGVRGIAL 176 S L L +D I+ P DA G LS ++ D +I++ +R D GV G A Sbjct: 110 VSMAALGLGEDVGPIL-CPADASPGTPLSRFIPTGDTLIEIDNKSATHRPDLWGVYGFAR 168 Query: 177 DLVAAGLGKLKEINISCPLSSESIPLEIKF-DLDDSSLCKGFAMCC--VKGVRNNVA--- 230 +L A L PL + +P +F DL D + A C + G +VA Sbjct: 169 ELAAILRRPL------TPLDTADLP---RFGDLPDLPVANEAAGDCEVLTGFAVDVADLP 219 Query: 231 --PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKIL 288 P ++ RL +G+RS LVD TNYV L+ G P+H +D +S L VR A + Sbjct: 220 VTPLPVQARLALMGIRSAGILVDATNYVMLETGQPTHAYDRDVVSG-LAVRMAGKARDFV 278 Query: 289 ALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK 348 LD + L P+++V+ + +AGI+GG + D +T +L+E A + + R+ Sbjct: 279 TLDGRGRRLEPEDLVVFAGDTPVGLAGIMGGARSAVGDGSTRILIEAAQFRAARVRRTAG 338 Query: 349 NLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTA---SDICIARNITYKPRKIV 405 LG+ T++ RFE+ + GM + + + +L G S +C+ + PR+I Sbjct: 339 RLGLRTEASQRFEKSL-APGMASLAQARIFRLLEAWGAAPAARSRLCVQGDAGLTPRRIT 397 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW--RQDVEEKADLVEEI 463 E+ R +G +P + RIL LGF + + V+VP RQD+ D+VEE+ Sbjct: 398 MRTDEISRNAGTAIPDAEIDRILGALGFGIERGDGQLAVTVPPHRSRQDIGLPIDIVEEV 457 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 LRI+G I LP ++ + + Q R R ++R+L++ V + + + Sbjct: 458 LRIFGYANIAPR-LPTARIAPV-DPNAGQMRQRKIRRLLSTGHGFAEVQTYLWTDDTWLR 515 Query: 524 FGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + E L + NP++ D +RT+L+P LL N D AI+E+ V Sbjct: 516 EIGYEPEGALRLRNPVAPDKGRLRTTLVPNLLDVARSNAGHRT-DCAIYEIGRV 568 >gi|218562516|ref|YP_002344295.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|12229995|sp|Q9PP35|SYFB_CAMJE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|112360222|emb|CAL35017.1| phenylalanyl-tRNA synthetase beta chain [Campylobacter jejuni subsp. jejuni NCTC 11168] Length = 773 Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 215/836 (25%), Positives = 383/836 (45%), Gaps = 96/836 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ I N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGA-IMSNGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL + IM L D +G GR L+ Y +D +I+V LTPNR DC+ + G Sbjct: 119 CSSLELGFEKINEGIMLL--DESIGKLELGRPLNTYEIFNDELIEVELTPNRGDCLSIYG 176 Query: 174 IALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 IA DL AA LKE P SE++ L + + + + L A+ + ++ Sbjct: 177 IARDLAAALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIGLKEEIQT 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRAC 282 N+ + +++ +G SI L+ NY + G + +D S S+ + + + Sbjct: 234 NLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINLSKQV 290 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE ++ ++ S +GI + C D++ +++E DP+ Sbjct: 291 HGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV 334 Query: 343 IARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASDICIA 394 IA K D + YR RG + + ++ + + I +L++ ++ I Sbjct: 335 IA-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIY---SSSQQILTD 390 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQD 452 + + P I + + G +V ++ L+IL++LGF +I GE V P R D Sbjct: 391 KELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHRPD 445 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMME 509 ++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS E Sbjct: 446 IKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GYFE 502 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + + Sbjct: 503 SLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKL 562 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 FE+ V+ + E + I SG++ ++ + E +F D D ++I Sbjct: 563 FELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKNII 614 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFE 688 F + +S + P I S +I +G+ G H I + L IC E Sbjct: 615 GDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC--E 665 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 + LD I R K S + RDL+ ++ + + N I+ ++ ++++ Sbjct: 666 LDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENF 719 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 720 RLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 773 >gi|297380228|gb|ADI35115.1| phenylalanyl-tRNA synthetase, beta subunit [Helicobacter pylori v225d] Length = 764 Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 213/835 (25%), Positives = 380/835 (45%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDAPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + +RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTDLRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYTPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ LK I ++ S+ I L +++ S L + + C N+ Sbjct: 174 GIAREISTFYHTPLKPIKALNFTPKSDLITLHAGENIE-SHL--AYYLIC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + V +A + D + L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLNNFIEFSAHFSGVVMNAYSL-DATPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSECLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ V E IL+ LGF V + EV P++R D++ D Sbjct: 380 LEFKLEDITEILGLAVEEEKIQDILKNLGFKVSAKVPNSKPQILEVVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EV+++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFY 497 Query: 517 SKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++A+G++K S + G+ W S C + D + L+ P Sbjct: 558 VYNSKREEIQKLGFLASGLQKKESYPDAKGKTWDFYSFAECVSKVIGDFSLEKLTTQTPI 617 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 HP +S I + EI+ G + HP ++ L FE Y Sbjct: 618 ---------------NHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EIDASKLKRPTM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|15645030|ref|NP_207200.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori 26695] gi|2500986|sp|P56145|SYFB_HELPY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|2313508|gb|AAD07471.1| phenylalanyl-tRNA synthetase, beta subunit (pheT) [Helicobacter pylori 26695] Length = 764 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 210/833 (25%), Positives = 376/833 (45%), Gaps = 100/833 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSINDLNVFVNTPKDIAKLCEDLSRLGLEVESC--IPCIAPKNVVVGKILEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA ++ A LK I + + +S + + + S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIK-ALNFTPKSGLITLSAGENIESHLAYYLIC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + + +A ++ + L++ N Sbjct: 227 PLNIKLSLAHNNALSE-NDLNNFIEFSTHFSGVIMNAYSLN---------TTPMDLSVKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGKN 349 E +L ++V I R I KH D + +L+E + DPI+++ + K+ Sbjct: 277 DENNL--ESVYINHQKR-----STIAIKHQVQKDLSECLLLEASYTDPISLSLKLHALKD 329 Query: 350 LGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 + D+ YR RG + G+ + H+ + IL S K R + Sbjct: 330 KTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKATILESKQTEHS---------LKDRTL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKADL 459 F ++ + G+ V E IL+ LGF V + E + EV P++R D++ D+ Sbjct: 381 TFQLEDITEILGLAVEKEKIQGILKNLGFKVSVKEPNSKPQILEVIAPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKR-NLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 EEILR G+D + S+PL ++ N + + LA EV+++ F SK Sbjct: 441 AEEILRFVGIDNLVSKPLHCVSSKNSNPNYDTHRFFENLKHKALAC-GFKEVIHYVFYSK 499 Query: 519 EQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E VY Sbjct: 500 EKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGSVY 559 Query: 577 ENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 + E QK ++ +G++K S + G+ W S C + D + L+ P Sbjct: 560 NSKREEIQKLGFLISGLQKKESYPDTKGKAWDFYSFAECVSKVIGDFSLEKLTTQTPI-- 617 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 HP +S I + EI+ G + HP ++ L FE Y I Sbjct: 618 -------------NHPYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYAEI 657 Query: 695 PISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDV 752 + KR ++ S++P RDL I+D++ + +K+ + ++ D+ Sbjct: 658 DAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPLDI 715 Query: 753 FQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 F+ E S+A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 716 FK-----ESNNSIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|15612044|ref|NP_223696.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori J99] gi|11135454|sp|Q9ZKF8|SYFB_HELPJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|4155564|gb|AAD06558.1| PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN [Helicobacter pylori J99] Length = 764 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 212/836 (25%), Positives = 374/836 (44%), Gaps = 106/836 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L ++T + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVNTPKDIAKLCEDLSRLGLEVESC--IPCIAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++D GK + + VVCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVDVGK-EVLPVVCGAKNVAPNQFAPVALKGAII--GSTTIAKTELRGVESHGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L +Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSIELGFPKINDGILEL--DESVGELVLGKELHEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 GIA ++ A LK I + + S + + D + S + +C N+ Sbjct: 174 GIAREISAFYHTPLKPIK-ALNFTPTSDLITLSADENIESHLAYYLIC------NHSLKT 226 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 + +L ++S D+ N++ + + +A ++ L + N Sbjct: 227 PLNIKLSLAHNNALSE-NDLNNFIEFSAHFSGVILNAYSLNKTPID---------LIIKN 276 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI-----ARSG 347 E +L ++V I R I KH D + +L+E + DP+++ A Sbjct: 277 DENNL--ESVYINHQKR-----STIVIKHQDQKDLSECLLLEASYTDPVSLSLKLHALKD 329 Query: 348 KNLGIITDSRYRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 K L YR RG + G+ + H+ + IL S K + Sbjct: 330 KTLQKDNALVYRSTRGSNPNLSDGLNFLSAHLKAAILESKQTEHS---------LKDCAL 380 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADL 459 F ++ + G+ + E IL+ LGF V + EV VP++R D++ D+ Sbjct: 381 TFQLEDITEILGLVIEAEKIQNILKNLGFKVSTKEPNSKPQILEVIVPNFRHDIKTIQDI 440 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSF 515 EEILR G+D + S+PL +N + R+ + L +A+ EV+++ F Sbjct: 441 AEEILRFVGIDNLVSKPL---HCVSSKNSNPHYDTHRFFEN-LKHKALACGFKEVIHYVF 496 Query: 516 ISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 497 YSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKG 556 Query: 574 HVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 VY + E QK ++ +G++K S G+ W F + A+ +S I Sbjct: 557 SVYNSKREEIQKLGFLVSGLQKKESYPHAKGKAWD------------FYSFAECVSRIIG 604 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 SL+ L ++ HP +S I + EI+ G + HP ++ L FE Y Sbjct: 605 DFSLEKLTTQT---PINHPYQSAKIIQNNEII-GVIAKIHPKVIQELDL------FESYY 654 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTV 749 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 655 AEIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEILP 712 Query: 750 FDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 713 LDIFK-----ESGNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|266625661|ref|ZP_06118596.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium hathewayi DSM 13479] gi|288862432|gb|EFC94730.1| phenylalanyl-tRNA synthetase, beta subunit [Clostridium hathewayi DSM 13479] Length = 421 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/405 (32%), Positives = 208/405 (51%), Gaps = 20/405 (4%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDL 58 M LSW+K ++ D DVS ++ D +T G +VE + + L + ++ +ER+PD Sbjct: 1 MNTPLSWIKAYVPDLDVSDQEYTDAMTLSGTKVEGFERLDRNLEKIVVGRIDKIERHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVG------LLG---VWAPPGSCIPENNMIVNVRK 108 D I+ +++ G + IQ+V GAPNV+ G L G G +PEN + + + Sbjct: 61 DKLIICQVNIG-GETIQIVTGAPNVKEGDKVPVVLDGGKVAGGHDGGPLPENGVAIKKGR 119 Query: 109 IRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +RGIES GM+CS +EL S + + I LP DA G + L L D + + +T Sbjct: 120 LRGIESNGMLCSIEELGSSKEMYPDAPESGIYILPEDAETGADAIEVLGLRDSVFEYEIT 179 Query: 163 PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR DC V GIA + A + ++ + E I +K ++DS LC + V Sbjct: 180 SNRVDCYSVIGIAREAAATFDKPFQPPVVTATGNDEDINSYLKVSVEDSHLCPRYCARMV 239 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRA 281 K ++ +P+WM++RL A G+R I+ +VDITNYV + G P H FD +S + V+ A Sbjct: 240 KNIKLAPSPSWMQRRLAACGIRPINNIVDITNYVMEEYGQPMHAFDYDLLSGHEIIVKCA 299 Query: 282 CSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 G+ LD QE L ++I + IAGI+GG+++ D+ ++ E A +D Sbjct: 300 KDGDVFQTLDGQERKLDSSILMINDGEKEVGIAGIMGGENSKITDDVKTMVFESACFDGT 359 Query: 342 NIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 NI S K +G+ TD+ ++E+G+D + LI L G Sbjct: 360 NIRLSAKKVGLRTDASGKYEKGLDPNNAEAAVNRACQLIEELGAG 404 >gi|118474852|ref|YP_892409.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. fetus 82-40] gi|118414078|gb|ABK82498.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter fetus subsp. fetus 82-40] Length = 778 Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 216/837 (25%), Positives = 376/837 (44%), Gaps = 93/837 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPDL 58 M + +WL + +D + +S E ICD L SIGLEV+ + + A + +V + VE Sbjct: 1 MIISKNWLNEWVDVSHISTETICDKLNSIGLEVDSLKSIAAPKKVVVGQVRTCVEHENSD 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D G + +Q+VCGA NV G A G+ +P N + + K+RG+ S GM+ Sbjct: 61 HLHVCEVDVGT-EVLQIVCGAKNVASGQFVACALVGAIMP-NGLEIKSAKLRGVASFGML 118 Query: 119 CSEKELMLS--DDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L+ +D I++ I + +G L +Y +D II++ LTPNR DC+ + G+A Sbjct: 119 CSSSELGLAKINDGIIILDDSIGELILGKELREYPIFNDDIIEIDLTPNRGDCLSINGVA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLD---DSSLCKGFAMCCVKGVRNNVAPN 232 DL A +++ P E L I L D + F ++ ++NN + Sbjct: 179 RDLSVALDIPMRD---RTPREEEEKLLGIGRILSIHCDEKIDGSFLYRAIE-LKNNFEIS 234 Query: 233 WMRQ-RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 RL + +++ + YV+ G V+D +I A E + +D Sbjct: 235 LKTDLRLALIDCSKTNSIQKVLEYVTHATGVLFRVYDYHKI--------AKDDEDKINID 286 Query: 292 -----NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 N Y + SDG+ AGI A D+ + +++E + +P IA + Sbjct: 287 IKIEANGSYG-------VYSDGKCLGQAGIWQTDEARLDECSRVIIIEASYTEPDVIASA 339 Query: 347 --GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT---ASDICIARNITYKP 401 G D+ YR RG + P L + L+ L A + + K Sbjct: 340 IGGDKKQPKDDATYRSSRGSE-----PKLSIGMDLLFDLFSKNKKIAPYAGAQQILLEKE 394 Query: 402 RKIVFMNS-EVKRLSGIDVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKAD 458 + IV N E+ + G ++ D ++IL++LGF + E ++ VP +R D+ D Sbjct: 395 QTIVSFNCPEICNMIGSEISRNDVIKILKKLGFDITFNVEQEQIYARVPFYRHDIRNTHD 454 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR-TRYVKRVLASRAMMEVVNWSFIS 517 + EEI+RI G+D I S PL ++ +++ N + + + ++ ++ A E V++ F + Sbjct: 455 ICEEIVRIIGIDNIPSTPLIFSE-KNRINPTFESYKHSKDLRHKAAMAGFFECVHYIFDN 513 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E+ G EILNPI+ +++ ++ +L+ LL + RNV + +FE V++ Sbjct: 514 AEELEALGFKPSRTEILNPINNELAVLKPTLINHLLNSCERNVKNSKRSVRLFEFGDVFD 573 Query: 578 NDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE----- 630 +G K ++A+G+ + + G+ D F + D + IE Sbjct: 574 ETGIQGSKFGFIASGLINEPTLLNGAKPAEID-------FFTFANLIQDIIGKIELKNGK 626 Query: 631 --PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGF 687 F+S FE S Y G +GY G N+ L +C Sbjct: 627 NIVFLS----EFEQA--SIYKNGN----------YIGYIGRLDLNLELKRDLPKTYVC-- 668 Query: 688 EVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDD 746 E+ D I S K + S + RDL+FIV + IP + N I+N++ L + + Sbjct: 669 ELDFDKIKFS------AKMAKNYSKFPSISRDLSFIVPKDIPYIEIKNCIENLNILTLKE 722 Query: 747 VTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D++ ++L + K S++++ Q ++ T D++I +D+I+ + K LR Sbjct: 723 FLPVDLYSDETLAD-KVSLSVKFTFQDMQKTLEDEEIADTIDKILAALNDKLGIGLR 778 >gi|317177802|dbj|BAJ55591.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori F16] Length = 764 Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 216/835 (25%), Positives = 388/835 (46%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDVPKDIAKLCEDLSRLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + ++ ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTISKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ LK I ++ S+ I L +++ S L + + C N+ Sbjct: 174 GIAREISTFYHTPLKPIKALNFTPKSDLITLHAGKNIE-SHL--AYYLIC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + V +A ++ + L++ Sbjct: 226 TPLNIKLSLAHNNALSE-NDLNNFIEFSAHFSGVVMNAYSLN---------TTPIDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I KH D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ + E IL+ LGF V I E EV P++R D++ D Sbjct: 380 LKFKLEDITEILGLAIEEETIQGILKNLGFKVSIKEPSSKPQILEVVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EV+++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFY 497 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 558 VYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGD 605 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL+ L + AP HP +S I + EI+ G + HP ++ L FE Y Sbjct: 606 FSLEKLT--TQAP-INHPYQSAKIIQNHEII-GVIAKIHPKVIRELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EINASKLKRPTM--LLKPFSIYPSSVRDLTLIIDENTAFSKIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESNNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|315638682|ref|ZP_07893856.1| phenylalanyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] gi|315481306|gb|EFU71936.1| phenylalanyl-tRNA synthetase beta subunit [Campylobacter upsaliensis JV21] Length = 773 Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 202/813 (24%), Positives = 386/813 (47%), Gaps = 71/813 (8%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL + ++ D +LE + TL SIGLEV+K + +A + + +V+ ++ + + Sbjct: 1 MIITRTWLSEWVNIDDKNLELLVKTLNSIGLEVDKAYSLKAPNNVVVGQVIEKFKHENAE 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ ++D G + +Q+VCGA NV A G+ +P N + + K+RG+ES GM+ Sbjct: 61 KLSVCKVDIGT-EILQIVCGAANVAQNQFVAVALNGAKMP-NGLEIQKAKLRGVESNGML 118 Query: 119 CSEKELML--SDDSASIMELPI-DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL ++D +++ I + +G L+ Y +D I++ LTPNR DC+ V G+A Sbjct: 119 CSSVELGFGKTNDGILVLDESIGELELGRELNSYDIFNDEFIEIELTPNRGDCLSVYGVA 178 Query: 176 LDLVAA---GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 DL A L + KE S L + D +SL A + + N + N Sbjct: 179 RDLAVALELDLNEKKEFKESENALGIGRILRLGVTRDLNSLLMYRAFELKEELHNKLLIN 238 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 RL L S +++ ++ NY + G + +D ++ + + E AL Sbjct: 239 L---RLAQAELLSQNSIENLLNYATHSTGVLFNAYDFDKL-------KKNNDELNFALSK 288 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS-GKNLG 351 +E S I+ SI+GI + CD+ T V++E DP IA+S GK Sbjct: 289 EEQGESK----ISCQEEFLSISGIYQNANLKCDEKTKIVILEAHYTDPSIIAQSKGKYQK 344 Query: 352 IITDSRYRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN 408 + + YR RG + + GM +L+ I ++ + ++ + + YK +I+ ++ Sbjct: 345 VDEKTFYRSFRGSEPKLNIGMDFLLQQIATIQDVMIYSSSQQV-----LDYKKEQIITIS 399 Query: 409 SE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRI 466 E + G ++ ++ L+IL++LGF ++ D + VP R D++ D+ EEI+RI Sbjct: 400 IETINNTIGQNIDKDEILKILKKLGFELLLSNDGLINIKVPLHRSDIKNIFDICEEIVRI 459 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-----VKRVLASRAMMEVVNWSFISKEQS 521 G+D I S+ L + +N L Q+ Y +++ + E +++ ++++ Sbjct: 460 VGIDNIISKGLEFVE----KN-HLNQTYKDYKELLNLRQNAVNNGYFESLHYVLDNEKEL 514 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 +FG + L+++NPI+ +++ +R++LL LL A N + +F+ V+ + Sbjct: 515 EIFGFDKLGLKLINPITEELNTLRSTLLNQLLNAASLNAKNSQKIIKLFQSGAVF--NAK 572 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + + A I SG + ++ S+K+ + V+ +D D +++ F L + F Sbjct: 573 NEELHHIAFIH---SGFKEEAKI-SNKA--KPTLVNFYDFLLDMRNILGEF-ELKASNFH 625 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKK 700 +P ++ I K + +I G+ G H N+ LS +C ++ L K Sbjct: 626 FLSPYE----QAYIYKNNQKI--GFLGRVHLNLETQKDLSKSYVCELDLTL------LKN 673 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL-IDDVTVFDVFQGKSLG 759 K K S V RDL+ +V ++ P T+ I+ + +++ + D++ ++L Sbjct: 674 EVKVTKAY--SKFPKVSRDLSILVPKNFPYETIKETIQKLHLANLENFRLIDLYSDENLK 731 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + S+ + + L+ T D +I ++ I++ Sbjct: 732 D-LYSLTLNFNFKSLEKTLEDKEINAYLETILK 763 >gi|308063834|gb|ADO05721.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori Sat464] Length = 764 Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 213/835 (25%), Positives = 386/835 (46%), Gaps = 104/835 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +DT + K+C+ L+ +GLEVE ++P ++V +E+ P + Sbjct: 1 MKLSVNDLSVFVDTPKDIAKLCEDLSRLGLEVESC--IPCVAPKSVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVSVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSNELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L +++ S L + + C ++ ++ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLHAGENIE-SHL--AYYLICNHSLKTPLSV 230 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 A+ D+ N++ + V +A + D + L++ Sbjct: 231 KLSLAHNNALSEN------DLNNFIEFSTHFSGVVMNAYSL-DATPID--------LSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA---RSGK 348 N E +L ++V I R I K+ D + +L+E + DPI+++ + K Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKYQDQKDLSECLLLEASYTDPISLSLKLHALK 328 Query: 349 NLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + + D+ YR RG + G+ + H+ + IL K R Sbjct: 329 DKTLQKDNALIYRSARGSNPNLSDGLNFLSAHLKAAILE---------SKQTKHALKDRT 379 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 + F ++ + G+ + E IL+ LGF V + EV P++R D++ D Sbjct: 380 LKFKLEDITEILGLAIEEEKIQGILKNLGFKVSAKVPNSKPQILEVVAPNFRHDIKTIQD 439 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMMEVVNWSFI 516 + EEILR G+D + S+PL V +K++ + + +K + EV+++ F Sbjct: 440 IAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKEVIHYVFY 497 Query: 517 SKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 SKE+ G E LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 498 SKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEKGS 557 Query: 575 VYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 VY + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 558 VYNSKREEIQKLGFLASGLQKKESYPDAKGKAWD------------FYSFAECVSKVIGD 605 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SL+ L + AP H +S I + EI+ G + HP ++ L FE Y Sbjct: 606 FSLEKLT--TQAP-INHSYQSAKIIQNHEII-GVIAKIHPKVIQELDL------FESYYA 655 Query: 693 SIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVF 750 I S+ KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 656 EIDASKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEILPL 713 Query: 751 DVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA L+ Sbjct: 714 DIFK-----ESDNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNARLK 763 >gi|88597548|ref|ZP_01100782.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] gi|88190140|gb|EAQ94115.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 84-25] Length = 771 Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 216/840 (25%), Positives = 376/840 (44%), Gaps = 106/840 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ I N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGA-IMSNGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRN 227 + GIA DL AA LKE P L I L G V G++ Sbjct: 173 SIYGIARDLAAA--LNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRVIGLKE 227 Query: 228 NVAPNWMRQ----RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 + N + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 228 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 284 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 285 SKQVHGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 328 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASD 390 DP+ IA K D + YR RG + + ++ + + I +L++ ++ Sbjct: 329 DPLVIA-DAKIYHKDQDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIY---SSSQQ 384 Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPS 448 I + + P I + + G +V ++ L+IL++LGF +I GE V P Sbjct: 385 ILTDKELPIIPISI----EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPL 439 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASR 505 R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR +AS Sbjct: 440 HRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS- 496 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E +++ + E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 497 GYFESLHYVLDNGEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKK 556 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ + E + I SG++ ++ + E +F D D Sbjct: 557 IIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDI 608 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPI 684 ++I F + +S + P I S +I +G+ G H I + L I Sbjct: 609 KNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYI 661 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 C E+ LD I R K S + RDL+ ++ + + N I+ ++ + Sbjct: 662 C--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEI 713 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 714 LENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 771 >gi|315453350|ref|YP_004073620.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] gi|315132402|emb|CBY83030.1| phenylalanyl-tRNA synthetase beta chain [Helicobacter felis ATCC 49179] Length = 764 Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 196/753 (26%), Positives = 341/753 (45%), Gaps = 104/753 (13%) Query: 8 LKDHLDTDV-SLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRI 65 L+D L+ + S+ +C L+ IGLEVE V + + K+L ++P+ + ++ ++ Sbjct: 8 LQDFLEGALPSVSTLCADLSRIGLEVESVTPFNLPAQVVVGKILECIKHPNAEKLSVCQV 67 Query: 66 DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELM 125 D GK + +Q+VCGA NV+ G L A + +P N+ + +RG++S GM+CS EL Sbjct: 68 DNGK-EILQIVCGAKNVKAGQLVALALQRAHLPACNLHIQPSTLRGVQSFGMLCSSVELG 126 Query: 126 LSDDSASIM----ELPIDAPV--GGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 L I+ L D P+ G L D + ++D++LTPNR DC+ V G+A +L Sbjct: 127 LPKLYEGILILDSSLNKDQPLKLGTPLKDLPFFTGTLLDIALTPNRGDCLSVLGVARELS 186 Query: 180 AAGLGKLK---EINISCPLSSESIPLEIK--------FDLDDSSLCKGFAMCCVKGVRNN 228 A LK +++ S + ++P + LD L G A+ +++N Sbjct: 187 ALYKLHLKTPPKLSYSLLEALPTLPQNLPPCALSYGVLHLDTPFLPLGIALTL--ALQHN 244 Query: 229 VAPNWMRQRLKAVGLRSISALVDITNYVS--LDRGYPSHVFDASRISDVLTVRRACSGEK 286 + +W I+ L++ + Y+S + + YPS Sbjct: 245 LQESW------------IANLLEYSTYLSGVILQAYPSVPLQVHA--------------- 277 Query: 287 ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS 346 D Q + + + +++A I G +A T+ L+E + +P ++ +S Sbjct: 278 ----DTQGF--------LHTQHAGKNLATI--GVYAPTPPQTSPYLLEASFIEPSHLCQS 323 Query: 347 -GKNLGIITDS-RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI 404 K+ T + +R +RG + Q + L+ + S++ + A T P + Sbjct: 324 LHKHPQESTPAIMHRTQRGSNPQ-VQEGLEWLASVLARFYPNARLQVS-APVSTLTPSSL 381 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 EV ++ G++V ++ ILE LGF V D + VP +R D+E D+ EEIL Sbjct: 382 QLSLIEVVQVLGMEVSLDQVRAILEGLGFGVEVAGDALTLHVPPYRHDIEGVHDIAEEIL 441 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM----EVVNWSFISKEQ 520 R G+D + P L + + + R R+ +R LA++A+ EVV++ F +KE+ Sbjct: 442 RFVGID---NAPKALLHTAETSSANPHYGRYRF-ERNLATKALALGFREVVHYLFANKEK 497 Query: 521 SVLFGGG--QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G Q L++LNPI+ D + +RTSL+PGLL+A RN + +FE+ ++Y Sbjct: 498 LKALGYPTLQENLDLLNPINQDFNTLRTSLIPGLLEANARNKNLGFKSLTLFELGNIYNT 557 Query: 579 DTPE--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV--S 634 + E ++A+G++ G+ W D + VI F S Sbjct: 558 EREERASLAFLASGLKTSPHYPHPKGQAW-----------DFYHFAHTLSKVIGAFSLES 606 Query: 635 LDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + S + S + YHP +S +I+ +I G G +P ++ L + GF +D Sbjct: 607 ITSTQDRSYLTTTYHPYQSAWMIQEGRKI--GVLGAINPVLVQKEDL---LEGFIAEIDR 661 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 + QK + S L RDL +VD+ Sbjct: 662 ACLHQKPY----RAQEFSKLPTSFRDLTLLVDK 690 >gi|86152061|ref|ZP_01070273.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|121612808|ref|YP_001000571.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|167005503|ref|ZP_02271261.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. jejuni 81-176] gi|85840846|gb|EAQ58096.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 260.94] gi|87249537|gb|EAQ72497.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 81-176] Length = 773 Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 215/844 (25%), Positives = 380/844 (45%), Gaps = 112/844 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A + +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKDAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + GIA DL A LKE P SE++ L + + + + L A+ + Sbjct: 173 SIYGIARDLATALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C D++ +++E Sbjct: 287 SKQVHGE----------------TKVSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 DP+ IA K D + YR RG + P L + +LS+ I Sbjct: 331 DPLVIA-DAKIYHKDQDEKMLYRSFRGSE-----PKLNLGMDFLLSIFEQ------IPNL 378 Query: 397 ITYKPRKIVFMNSEVKR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEV 444 + Y + + + E+ + G +V ++ L+IL++LGF +I GE V Sbjct: 379 VIYSSSQQILTDKELPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINV 437 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRV 501 P R D++ +D+ EE++RI G+D I S+ L +E R S ++ ++ KR Sbjct: 438 KAPLHRPDIKNLSDICEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRA 495 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +AS E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N Sbjct: 496 VAS-GYFESLHYVLDNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAK 554 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + +FE+ V+ + E + I SG++ ++ + E +F D Sbjct: 555 NSKKIIKLFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL-- 607 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL- 680 D ++I F + +S + P I S +I +G+ G H I + L Sbjct: 608 -LDIKNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLP 659 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 IC E+ LD I R K S + RDL+ ++ + + N I+ + Sbjct: 660 KTYIC--ELDLDLI------RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEEL 711 Query: 741 D-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + ++++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K Sbjct: 712 NLEILENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLG 769 Query: 800 AVLR 803 LR Sbjct: 770 LDLR 773 >gi|116515024|ref|YP_802653.1| hypothetical protein BCc_083 [Buchnera aphidicola str. Cc (Cinara cedri)] gi|116256878|gb|ABJ90560.1| phenylalanyl-tRNA synthetase, b subunit [Buchnera aphidicola str. Cc (Cinara cedri)] Length = 796 Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 211/846 (24%), Positives = 382/846 (45%), Gaps = 94/846 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNP-DL 58 MKF WL++ ++ +S+ +C+ LT+ G EVE + + +S I +++S E+ + Sbjct: 1 MKFGEEWLREWINPSISVPDLCEQLTNFGCEVEYFKKKYKTISSVVIGQIISKEKYFLNK 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP----ENNMIVNVRKIRGIES 114 I I K+++I VV + G+ IP +N + N++ + Sbjct: 61 KFLIYNILINKNKKIYVVYFKKK--------YLSIGNKIPIILGKNCIKKNIKNLSLNNI 112 Query: 115 TGMMC----SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIG 170 C S L + ++ I+ L VG +D+ +D ++ + NR D Sbjct: 113 NNNFCHHFGSYHLLDIQKNNHKIIVLSKYVTVGLNFNDFFYKNDYLMKFFVPFNRIDLRS 172 Query: 171 VRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG-------------F 217 + G++ ++ A L KLK IP I+ D + K + Sbjct: 173 LWGLSREI--AILNKLK------------IPKLIRIDNIQNKKKKQINCNINIENIPIQY 218 Query: 218 AMCCVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 C + + +++ P M+ RL L + + + +I NY+ ++ GY HVFD IS L Sbjct: 219 FFCELYKINLDSILPFKMQIRLLQSNLLTDNIIENIINYIFIETGYWFHVFDLDHISKNL 278 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 ++ I + +++ L +++ I S + ++ T ++ + Sbjct: 279 YIKSIKKKTYIFDTNKKKFFLRKGTIILTDLKNILSFEDMEYSCYSRISSTTKNLFLGSI 338 Query: 337 LWDPINIARSGKNLGI------ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD 390 + P I + +NL I I S+Y F + + K+I LIL++CGG +S+ Sbjct: 339 CFCPNFIQK--RNLLIPFFSRKIEYSKYNFYPKIQKN----IFKYIQKLILNICGGRSSN 392 Query: 391 I---CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVP 447 I + +N KI F ++ ++SGI +D + IL+ FS I D F V+ P Sbjct: 393 IKKYNLIKNFII-TNKIFFTIRKLNKISGIIFLKKDIITILKSCYFSYIENNDSFYVTPP 451 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPL----TQVEDKRNLSLQQSRTRYVKRVLA 503 WR D++ + D++ EI+R+YG ++IKS P P + + +K++ + SR +K L Sbjct: 452 YWRLDIQIEEDVISEIIRMYGYEKIKSCP-PQEHINSNISNKKSEEMSLSR---IKFFLI 507 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 + E++++SF++ + F ++I NPIS DMS MRTSL GLL+ + +R Sbjct: 508 DQGYNEIISYSFVNLKMQRSFISKNHFIKIQNPISNDMSIMRTSLWIGLLQCISYHQNRQ 567 Query: 564 IADFAIFEVSHVY----ENDTPEGQ-KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 +FE + +N Q +Y++A I SG + R W R R D Sbjct: 568 YESIRVFEFGLCFYLKNKNKFSIIQDEYLSAAI----SGF-SNRREWY----YRKRKFDF 618 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 +D K D S++ D++ F S G+S I E++ G ++ F Sbjct: 619 YDLKGDVESILNILGKFDNIEFVSEKFLGLCLGKSAGIYLHGELI----GFLDSSLHRLF 674 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII- 737 L N + FE+ I Q K+ K+ +S+L KRD++ I+ I ++++ Sbjct: 675 NLKNSVILFEIKWKKICSHQIKKIKS-----ISTLPISKRDISIIISDKIIVKDIIDLCN 729 Query: 738 KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 KN+ ++ V+D++ G ++ GKKS++I L L+ ++ DI I + + + + K Sbjct: 730 KNIYIKNSEIYVYDIYTGSNVPSGKKSISICFLFNSLQSMLKESDININILQCISALKDK 789 Query: 798 TNAVLR 803 A+LR Sbjct: 790 FGAILR 795 >gi|299830594|ref|YP_003735042.1| phenylalanine tRNA synthetase [Durinskia baltica] gi|297384958|gb|ADI40257.1| phenylalanine tRNA synthetase [Durinskia baltica] Length = 706 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 169/694 (24%), Positives = 322/694 (46%), Gaps = 84/694 (12%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDS----- 211 +D+S T NRSD + ++G++L++ A L I P S+++ P +F+ +S Sbjct: 49 LDISSTANRSDSLSIQGLSLEIAAL----LNHNPIELPYSTKTYPWFQEFESLNSNDPIQ 104 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + C GF ++ + + +P W++Q+L + G + L D NY+ ++ GYP +D + Sbjct: 105 TNCSGFISLIIENLTSFQSPKWLQQKLISSGFSVENNLTDFQNYILIETGYPLEFYDFDK 164 Query: 272 ISD-------VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 I+ L+++ + +A + +Y L +V+ ++ SIAGII Sbjct: 165 ITSKVPTSQIQLSLKGLDEPFEFVARNGNQYLLEESVLVVKANNLPISIAGIISSNETSY 224 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 +T +LVE ++++ I + + LG+ TD R+E+ + ++ L +SL L Sbjct: 225 SKDTKSLLVEASIFNAAQIRQQSRILGLRTDRSARYEKSIKNTTLLEALYRFISL---LR 281 Query: 385 GGTASDIC----IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRI------------- 427 IC IA+ I R+I +VK++ G PI+ + I Sbjct: 282 IENPKLICKLHTIAKPIKDPVRRIKLNYEKVKQVLG---PIQTTKTIDDQYISPKLITEA 338 Query: 428 LERLGFSVIGEYD----KFEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 L RL F V YD +++S+PS+R D+ + D++EEI R+YG + LT++ Sbjct: 339 LTRLQFQVT--YDTQNVTWDISIPSFRNDDIVREIDVIEEIGRLYGFNNF------LTRL 390 Query: 483 EDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + L + R K++ L + + E++ +S +++E + E+E++NP+ Sbjct: 391 PKIKTLGNEDWDYRTRKKLTSCLINLGLTELIQYSLVNQESFF-----KNEIELINPLVK 445 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGIRKG--- 594 + S +R+SLLP LLKA N + + FE H++ D+ +K + AGI G Sbjct: 446 EYSKLRSSLLPNLLKAVEENFKKGNSVLEGFEYGHIFLIDSSSDIREKEVVAGIFGGFPT 505 Query: 595 ----SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 S+ I G E + R LF L++ + S +R + +H Sbjct: 506 KSNWSANISQLGWF-----EAKGRMEQLF----KKLNIGTYWKSYQPIR----EKNIFHF 552 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 + I S LG FG+ P + +S I FE+ D I Q ++ K Sbjct: 553 YCTAEIFLSNGTKLGIFGQVSPILAKKLNISTNIYLFELEFDPIKY-QIQQNKLAVYQDY 611 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV 769 SS + +DL+FI+ I + ++ N + + ++ + D ++G+S+ S+ +Q+ Sbjct: 612 SSYPKIIKDLSFIIKDTISFSKIKEVLYLNGSQFLKEINLLDEYRGQSIPSHHTSLCLQL 671 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q +T +++++ ++ + + K+ +A +R Sbjct: 672 IFQSDFETLQNENVETILANLTSILTKEFHATIR 705 >gi|257461296|ref|ZP_05626393.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] gi|257441324|gb|EEV16470.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter gracilis RM3268] Length = 776 Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 214/843 (25%), Positives = 371/843 (44%), Gaps = 107/843 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T +WL++ +D +++ E++ TL SIGLEV+ D + V S R+ + D Sbjct: 1 MIITRNWLQEWIDISEIPSERLLSTLNSIGLEVDAHDKISLPKGVVVGLVKSKRRHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +D GK Q +Q+VCGA NV G + G+ +P + + + K+RG+ES GM+ Sbjct: 61 HLNVCEVDVGK-QSLQIVCGAKNVEAGQYVAVSLIGAVLP-SGLEIKPAKLRGVESFGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L+ + IM L + +G L +Y +D +I++ LT NR DC+ + GIA Sbjct: 119 CSATELGLAKTNDGIMVLDSSIGELVLGKELREYEIFNDDLIEIELTANRGDCLSILGIA 178 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW-- 233 DL AA +PL+ K + +D+ G + V+ + Sbjct: 179 RDLGAA----------------LDLPLKEKHEFEDADGAPGIGRILSVRASDEVSAKFAF 222 Query: 234 ------------MRQ--RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 ++Q RL +VG+ A+ + NY + G +D +I+ V Sbjct: 223 RAYEIKGELKLNLKQTLRLASVGILQSCAVQNFINYATHSTGVLLRAYDFEKIASV---- 278 Query: 280 RACSGEKILALD-----NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVE 334 + +ALD N E+ + + R+ S+AGI ++ VL+E Sbjct: 279 -----DGKVALDIKPMPNGEFG-------VYAGKRLLSVAGICQDAELKACCSSKVVLLE 326 Query: 335 VALWDPINIARS-GKNLGIITDSR-YRFERGVDLQGMIPVLKHIVSLI----LSLCGGTA 388 P+ IA++ +N + D YR RG + + + + L+ +SL GT Sbjct: 327 ANYTAPLIIAKAVNENKSLKGDEHVYRSSRGSEPKLRLGLDLLFRLLLKNKAVSLYAGTQ 386 Query: 389 SDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPS 448 I+ + +P + F E+ + G +P + ++IL+RLGF V E D VP Sbjct: 387 K---ISNAL--EPLIVGFSEKEINSMIGAQIPRDKIVKILKRLGFDVGVEADLITAKVPP 441 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +R D+ D+ EEI+RI G+D I + PL + + + R ++ A+ Sbjct: 442 FRHDIVNSHDVCEEIVRIVGIDNIAAAPLSFYEKNRLNDTYVSLCNGRKLRSKAAAVGFF 501 Query: 509 EVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E V++ F + G +++ILNPI+ ++ +R +L+ LL++ RN+ + Sbjct: 502 ECVHYVFDDSKALQSLGFAPCKVKILNPINGELDALRPTLINHLLESAERNLKNSRRSVK 561 Query: 569 IFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE+ V++ D + + ++A+G++ S G+ D F +L + Sbjct: 562 LFELGEVFDADGSQCLRLGFIASGLKAEPSIAVGAKPAAVD----FLYFANLIQSVIGKF 617 Query: 627 SVIEPFVSLDSL-RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 V P +L L FE I+ EIV G+ G + L Sbjct: 618 KVRLPGENLKFLSEFEQAQ-----------IEQGGEIV-GFIGRVDYAVEAGRDLDKS-- 663 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRL- 743 YL I S+ K + S V RDL+ +V P+G IK +D L Sbjct: 664 ----YLCEIDFSKLKFENIVADAY-SKFPSVSRDLSILV----PSGMRFEQIKQCIDALK 714 Query: 744 ---IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNA 800 + ++ D++ +SLG+ KS+ I+++ Q L+ T D+ + D+I+ + + Sbjct: 715 IEALKELIPSDLYSDESLGD-SKSLTIRLVFQDLQKTLCDEQVAGFTDKILAALSSELGL 773 Query: 801 VLR 803 LR Sbjct: 774 GLR 776 >gi|28493135|ref|NP_787296.1| phenylalanyl-tRNA synthetase beta chain [Tropheryma whipplei str. Twist] gi|81437906|sp|Q83GS8|SYFB_TROWT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28476175|gb|AAO44265.1| phenylalanyl-tRNA synthetase beta chain [Tropheryma whipplei str. Twist] Length = 962 Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 159/539 (29%), Positives = 249/539 (46%), Gaps = 68/539 (12%) Query: 9 KDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVL------------------ 50 + H D V+ E I ++L S+G E E +D E P + +VL Sbjct: 33 RTHTDCPVA-EDILESLLSVGFEGEILDRPELSGPIVVGRVLDFTEEVHSNGKTIRWCKV 91 Query: 51 -------------SVERNPDLDCAIL-RIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGS 95 S + NP DT E + +VCGA N G L V PGS Sbjct: 92 RVCAPVQPNNTPLSKDCNPSTQTGNFSNADTNSALETRDIVCGASNFSKGDLVVVTLPGS 151 Query: 96 CIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS-------- 147 +P V RK+ G S GM+ SEKEL + D+ I+ L + G LS Sbjct: 152 NLP-GGFHVTARKVYGHLSDGMIASEKELGVGDNHDGILRLA-EVFQGDELSKIREGDNA 209 Query: 148 -DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IK 205 D L L+D + VS+TP+R + +RGIA + A I S PL + +P + Sbjct: 210 LDLLALTDSAVAVSITPDRGYAMSIRGIAREYALA-----NNIPFSDPLPDDVLPAGGLS 264 Query: 206 FDLDDSSLCK--GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 DL CK F ++ + NN P WM +RL+ G+RS+ +VDITNYV ++ G P Sbjct: 265 IDLR----CKPNAFFTLLIQEIENNQTPQWMVRRLQLAGIRSVCPVVDITNYVMVETGQP 320 Query: 264 SHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG 323 H +D I L VR A E + +D + +L D++V+A + S+AG+IGG + Sbjct: 321 LHAYDYDAIQGSLCVRTADKKETLDTIDGRRLELHTDDLVVADANGVLSLAGVIGGSRSR 380 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 +T +L+E ++PI+I+ S + + T++ RF R VD+ L LI L Sbjct: 381 VTSDTKRILLEAGNFNPIDISLSSRRHKLYTEASARFARSVDILIAQRALARAAELIRDL 440 Query: 384 CGGTASDICIARNITYKPRKIVFMNS-EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK- 441 G +++ A I Y + + +++ +++R+ G E+ + L +G V + D Sbjct: 441 ASGDITELGSAY-INYTQQSPILLSTLDIERVVGCCFTREEIMSSLRAIGCDVSCDSDHS 499 Query: 442 ------FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSR 494 V+ PS+R D+ DL EE++R+ G ++I S L L+ ++ L QQ + Sbjct: 500 TPDTQVMLVTPPSFRADLVNVQDLAEEVIRVIGFNRIPS--LRLSVPHREQPLQSQQYK 556 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 68/319 (21%), Positives = 131/319 (41%), Gaps = 52/319 (16%) Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 S + S+ R + + NPI A +R SL+PGLL+ RN+ R + D +IFE+ V+ Sbjct: 663 SADTSIEHAPTTRAISLHNPIDATEGYLRRSLIPGLLQCAHRNLSRGLCDLSIFEIGRVF 722 Query: 577 ----------------------ENDTPEG-----QKYMAAGIRKGSSGIEGSGRLWSDKS 609 +T E Q Y + ++ GS+ I+ K Sbjct: 723 LGQLRTSNLIGCNSDSTCNACSRKNTIESMNEVYQPYTVSVLQTGSA-IQKQPYTEGRKY 781 Query: 610 EERCRFVDLFDAK---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 + D+FD+ A L V FV + P+ +HPGR + + GY Sbjct: 782 D----LADVFDSARQIARGLGVDFHFV-------QDKHPA-FHPGRCAKVICKHHHI-GY 828 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVD 725 G+ P + + L + + E+ LD + + ++++V P + L + Sbjct: 829 TGQILPTLANKHNLPDNVFACEINLDLV----AQLGCSQEIVKTLPTSPAATQHLTLTLG 884 Query: 726 QHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 +I A ++++++K L++D+ + D ++ + KKS+ + + + T + Sbjct: 885 NNIAAASVISVVKEGAGELLEDIRLIDEYKHEE--SDKKSLTFAMRFRDKEKTLTAQRVN 942 Query: 785 ILMDRIVENVVKKTNAVLR 803 + + V K A++R Sbjct: 943 LAKENAVRLASSKFGAIMR 961 >gi|222824192|ref|YP_002575766.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] gi|222539414|gb|ACM64515.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter lari RM2100] Length = 776 Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 197/808 (24%), Positives = 373/808 (46%), Gaps = 59/808 (7%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M + +WL + +D +++S + I +TL SIGLEV+ + +A I KVL ++ + D Sbjct: 1 MIISRNWLNEWIDLSEISTQAIVNTLNSIGLEVDSFKSVKAPQKVVIGKVLEKVKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++D G + +Q+VCGA NV + G+ +P N + + K+RG+ES GM+ Sbjct: 61 KLNICKVDIGS-EILQIVCGAKNVDKDQFVAVSLVGAVLP-NGLEIKPAKLRGVESMGMI 118 Query: 119 CSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL + IM L + +G L+DY +D +I++ LTPNR DC+ + G+A Sbjct: 119 CSSSELGFGKSNEGIMVLDESMGELVLGKVLNDYELFNDELIEIELTPNRGDCLSLYGVA 178 Query: 176 LDLVAAGLGKLKEINISCPL--SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 DL AA LKE+N PL S S+ + + + S +GF ++ N Sbjct: 179 RDLSAALDLNLKELN---PLKESENSVGIGRILSVKNQSDVEGFFAYRALEIKEEFKLNI 235 Query: 234 MRQ-RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 Q RL + + + ++ Y + G +D ++ + E I ++ Sbjct: 236 TIQIRLALIEAYKNNNIENLLTYATHASGVIFCAYDFHKLCQDCQIDEKIVLE-IKTQEH 294 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 EY + + +IA +AGI +D + +++E + P IA + Sbjct: 295 GEYGVYYKDELIA-------LAGIEQEDKFKINDESKIIIIEASYTHPQTIANAIAFYKK 347 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRK---IVFMN 408 D+ YR L+G P L + + + C +A + +K + I Sbjct: 348 KNDTIYR-----SLRGSEPKLSLGMEYLFNECLKISAMSVFSGSQQVFKENEANIIGIFG 402 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +E+ ++ G+ + + ++IL++LGF SV+ + ++F + +P R D+ AD+ EEI+RI Sbjct: 403 AEIDKIIGMPIDKNNLVKILKKLGFEISVVND-EQFNIKIPLHRSDIANIADISEEIVRI 461 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 G+D I S+ L + + + ++ +S E V++ ++EQ G Sbjct: 462 IGIDNIPSKALEFKEKNRLNKVYFDYQELKNLRLKASSNGYFESVHYVLDNEEQLSQLGF 521 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + +++NPI+ +++ +R++L+ LL A N+ + +FE V++ + E K+ Sbjct: 522 KCIKNKLINPITNELNTLRSTLINHLLNAASFNLRNSKKKIKLFECGSVFDEFSNEHAKF 581 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 SG + ++ ++ + VD + A+ S+I F SL + +P Sbjct: 582 AMI-----FSGYKEEAKI---TNKAKPVLVDFYTFLAELKSIIGEF-SLQKSEYAFLSPY 632 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTK 705 ++ + K I G+ G H I + L+ IC E+ L+ + K+ KT Sbjct: 633 E----QANVYKNGKRI--GFIGRVHLGIENKRDLAKTYIC--ELDLEGL----KQDFKTA 680 Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKS 764 K S + RDL+ ++ + + + I +D ++ V D++ ++LG+ S Sbjct: 681 KA--YSKFPSISRDLSIVIPKGFEYEKIKHTIAKLDIERLESFRVVDLYTDENLGDF-YS 737 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVE 792 + I ++ + + T D+ I +D+I++ Sbjct: 738 LTINLVFRDFEKTLEDNIILEYIDKIIK 765 >gi|224417930|ref|ZP_03655936.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter canadensis MIT 98-5491] gi|253827269|ref|ZP_04870154.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313141471|ref|ZP_07803664.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter canadensis MIT 98-5491] gi|253510675|gb|EES89334.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter canadensis MIT 98-5491] gi|313130502|gb|EFR48119.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter canadensis MIT 98-5491] Length = 791 Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 228/861 (26%), Positives = 392/861 (45%), Gaps = 128/861 (14%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 MKFT S L + L ++S E + TL IGLEVE + N A + K+L +++PD Sbjct: 1 MKFTRSILGNFLPLENISSEVMYKTLNKIGLEVESLQNICAPKKVVVGKILECQKHPDAT 60 Query: 60 ----CAI-LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGI 112 C + + G ++ Q+VCGAPN R G+ A G+ +P+ + ++K +RG+ Sbjct: 61 KLNICQVAVSGSEGNYETRQIVCGAPNARAGIFVAVALEGAVLPQ----ITIKKAVLRGV 116 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSD 167 ES GM+CS EL + I+EL DA +G L +Y +D + ++S+TPNR D Sbjct: 117 ESCGMLCSTTELGFPAINDGIVEL--DASIGVLEIGKELLEYSHFNDEVYEISVTPNRGD 174 Query: 168 CIGVRGIALDLVAA------------------GLGKLKEINISCPLSSESIPLEIKFDLD 209 C+ + GIA DL A G+G++ +I S + I+ + Sbjct: 175 CMSLLGIARDLSVALNLERKPLESLKSTENAPGIGRVLQITAEKGHESSLLYRAIETEPI 234 Query: 210 DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 LC + +++A +W+ L A+ ++ + V + YP Sbjct: 235 TIPLCVSLFL----AYNDSLANHWL---LNALNFSTLVSGVILN-------AYPQTFCQL 280 Query: 270 SRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 + SGE + L+ Q +L ++ I +G+ S+ GI H+ + + Sbjct: 281 GK----------ASGENKVILNLQNDELGFES--IYHNGKKLSVIGI----HSCLSEESL 324 Query: 330 D--------VLVEVALWDPINIARSGKNLGIITDSR------YRFERGVD--LQGMIPVL 373 V++E + P IA+ K L + S+ R RG + LQ VL Sbjct: 325 KDFKEGREFVILEASYIPPKIIAQ--KVLETKSKSKVDPKVFQRTARGSNPNLQMGFDVL 382 Query: 374 KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF 433 ++ + + ++ IA+N I S + ++ GI + ++IL+ L F Sbjct: 383 GKLLCCEDVVLYSDSQELIIAQN----NDSITIDISLIAKIIGITLERTKVVQILQALEF 438 Query: 434 SVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 + D+ V+ P +R D+ D+ EE++R G+D+I S+PL Q N + Sbjct: 439 QIEIPMDENLLVVTPPPFRHDISSYQDVAEEVIRFIGIDEIPSQPLVFIQ----SNQNNA 494 Query: 492 QSRTRYVKRVLASRAM----MEVVNWSFISKEQSVLFGGG--QRELEILNPISADMSNMR 545 +S KR LA +A+ E V++ F K++ +G + ELE+LNPI+ +++ +R Sbjct: 495 ESNLYCFKRKLAKKAIGANFNESVHFVFQDKQKLQQYGFEVLKDELELLNPITNELNTLR 554 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 T+LL GLL+A N + ++ EV VY+++ + K I SG+ R Sbjct: 555 TTLLLGLLEAAQLNKNNGFNGISLMEVGEVYDSNRNQSTK-----IAFLQSGLAMEERYP 609 Query: 606 SDKSEERCRFVDLFDAKADALS-VIEPFVSLDSLRFESGAPSWYHPGR-SGIIKTSAEIV 663 + K + F A A+ +S VI F+ L+ + +HPG+ + II EI Sbjct: 610 NAKGMKGNYF-----AFANRISRVIGEFL----LQETKSKIALFHPGQCAKIIYNHQEI- 659 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFI 723 G HP I + FGL + YL + + +K +K +V S + RDL+ + Sbjct: 660 -GILSALHPQIAEEFGLE------DTYLCEVDL-EKLSSKNPQVKMYSKFQKITRDLSVV 711 Query: 724 VDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 VD+ IP L I +++ +I D+++ +L E S+ I+ +Q T + D Sbjct: 712 VDKSIPYYCLKETISHLNIPIIVSFYPLDIYRDDNLKES-ISLTIRFELQSHHKTLEEKD 770 Query: 783 IRILMDRIVENVVKKTNAVLR 803 I M++++E +V+ +LR Sbjct: 771 IASAMEQVLEALVQNHKVILR 791 >gi|320096268|ref|ZP_08027848.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319976800|gb|EFW08563.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 425 Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 131/422 (31%), Positives = 215/422 (50%), Gaps = 42/422 (9%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLS-VERNPDLDCA 61 LSWL DH+D + ++ L +GLE E++ P + +VL+ VE Sbjct: 6 LSWLGDHVDVAEGTTAAQLAAALVRVGLEEEQIHPARVRGPLVVGRVLTRVEETASNGKT 65 Query: 62 I--LRIDTGKHQEIQ-------------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 + R+D G+H + ++CGA N G L V + PG+ +P + + Sbjct: 66 VNYCRVDVGEHNDAPGTGKEPSELPSRGIICGAHNFDAGDLVVVSLPGAVLP-GDFRIAA 124 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELP-------IDAPVGGRLSDYLELSDPIIDV 159 RK G S GM+CS +EL L +D I+ L I AP G + +L L + I+++ Sbjct: 125 RKTYGHVSDGMICSARELGLGEDHDGIIVLDRCYPDRRIPAP-GTDIVGWLGLGEEILEI 183 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSE---SIPLEIKFDLDDSSLCKG 216 ++TP+R C +RG+A + + ++ + +++E + P D + +G Sbjct: 184 NVTPDRGYCFSMRGVAREYSHSTGAAFRDPGLPGVIAAEPPSATPDGFPVVFADDAPVRG 243 Query: 217 ------FAMCCVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 F V+GV P WM +RL+A G+RS+S VDITNYV LD G P H +D Sbjct: 244 QKGVDRFVARVVRGVDPAAPTPRWMVERLEAAGMRSLSLAVDITNYVMLDLGQPMHAYDL 303 Query: 270 SRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI--ASDG---RIQSIAGIIGGKHAGC 324 ++ + VRRA GE ++ LD++E L P++++I + DG R+ IAG++GG+++ Sbjct: 304 GDLAAPIVVRRARDGESLVTLDSEERALDPEDLLITDSPDGEGSRVIGIAGVMGGQYSEV 363 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 TTDVL+E A +DP+++ARS + + +++ RFERG D + + L+ Sbjct: 364 GPATTDVLLEAAHFDPVSVARSARRHRLHSEASKRFERGADPRLPAVAAQRAAELLARYG 423 Query: 385 GG 386 GG Sbjct: 424 GG 425 >gi|283956241|ref|ZP_06373721.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] gi|283791961|gb|EFC30750.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 1336] Length = 773 Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 216/840 (25%), Positives = 382/840 (45%), Gaps = 104/840 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V +A + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVRG 173 CS EL + IM L D +G GR L+ Y +D +I+V LTPNR DC+ + G Sbjct: 119 CSSLELGFEKINEGIMLL--DESIGKLELGRPLNTYEIFNDELIEVELTPNRGDCLSIYG 176 Query: 174 IALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRN 227 IA DL A LKE P SE++ L + + + + L A+ + ++ Sbjct: 177 IARDLATALNLNLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKEEIQT 233 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRAC 282 N+ + +++++G SI L+ NY + G + +D S S+ + + + Sbjct: 234 NLLLSLRLAQIESLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINLSKQM 290 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 GE ++ ++ S +GI + C D++ +++E DP+ Sbjct: 291 HGE----------------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLV 334 Query: 343 IARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 IA K D + YR RG + P L + +LS+ I + Y Sbjct: 335 IA-DAKIYHKDQDEKILYRSFRGSE-----PKLNLGMDFLLSIFEQ------IPNLVIYS 382 Query: 401 PRKIVFMNSEVKR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPS 448 + + + E+ + G +V ++ L+IL++LGF +I GE V P Sbjct: 383 SSQQILTDKELPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPL 441 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASR 505 R D++ +D+ EE++RI G+D I S+ L VE R S ++ ++ KR +AS Sbjct: 442 HRPDIKNLSDICEEVVRIIGIDNIASKGLEF--VEKNRLNSAYKNYIEFLNLRKRAVAS- 498 Query: 506 AMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 499 GYFESLHYVLDNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKK 558 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ + E + I SG++ ++ + E +F D D Sbjct: 559 IIKLFELGVVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDI 610 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPI 684 ++I F + +S + P I S I +G+ G H I + L I Sbjct: 611 KNIIGDF------KLKSSKYNILSPYEQADIYLS-NIKVGFIGRLHLKIENERDLPKTYI 663 Query: 685 CGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RL 743 C E+ LD I K+ K K S + RDL+ ++ + + N I+ ++ + Sbjct: 664 C--ELDLDLI----KQDFKIAK--PYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEI 715 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++ + D++ ++L E S+ + + + T D+ + M +I+ N +K LR Sbjct: 716 LENFRLVDIYSDENLKEF-YSITMSFSFRDINKTLEDNQVNECMGKIL-NTLKNLGLDLR 773 >gi|322380830|ref|ZP_08054928.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter suis HS5] gi|321146737|gb|EFX41539.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter suis HS5] Length = 733 Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 191/695 (27%), Positives = 307/695 (44%), Gaps = 125/695 (17%) Query: 28 IGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 +GLEVE + R + KVL+ E++P+ + ++ ++D+G Q +++VCGA NV G Sbjct: 1 MGLEVESI-CRFNWPQVVVAKVLTKEKHPNAEKLSLCQVDSGS-QVLEIVCGAHNVEAGQ 58 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMEL-------PID 139 A G+ +P N + IRG+ES GM+CS KEL L I+ L P+ Sbjct: 59 FVALALEGAYLPAINTHIKPSIIRGVESFGMICSAKELGLPSIYEGILILDDSLHKSPLI 118 Query: 140 APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL---KEINISCPLS 196 + D+ + ++D+++TPNR DC+ V G+A ++ A KL K + PLS Sbjct: 119 PGIALDQLDFFQ--GALLDIAITPNRGDCLSVLGLAKEIAALYSLKLTLPKIPPLQNPLS 176 Query: 197 ---SESIPLEI---KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALV 250 + +PL + F L+ S L + ++NN+ N +S L+ Sbjct: 177 LNLPQDLPLVLGYASFKLEKSHL--PLEILLTLALQNNLQKN------------PLSNLL 222 Query: 251 DITNYVS--LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 + T Y+S + YP+H+ + D L R K L+ N+ I+S Sbjct: 223 EYTTYLSGVIMHAYPAHI-SLNIQKDSLGFVRVFDAYKELS-----------NIAISSP- 269 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR--SGKNLGIITDSRYRFERGVD- 365 D L+E + DP IA NL ++ R RG + Sbjct: 270 ----------------QTQDLDCLLEASFLDPNYIATRLHAHNLKHNALTQ-RTTRGSNP 312 Query: 366 --------LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 LQ ++ SL L + P+ + ++ ++ G+ Sbjct: 313 DVGLAFGILQTLLKRFNIPFSLHLRFLSPPLN-----------PKTLEISAVKIAKILGL 361 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + + +LE LGF V + V +P R D+ + D+ EE+LR G+D+I S PL Sbjct: 362 RLSSKKIQNVLESLGFKVQSQNSSLIVQIPLDRHDITLEEDIAEEVLRFIGLDKIPSTPL 421 Query: 478 PLTQVEDKRNLSLQQSRTRYV-KRVLASRAMM----EVVNWSFISKE--QSVLFGGGQRE 530 L + E TR++ +R LA +A+ EVV++ F KE + + + Q Sbjct: 422 LLFEKEINN-----PHYTRFLFERQLAYKALALQFNEVVHYLFTKKENLEKLGYPTLQEH 476 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--YMA 588 L++LNPIS+D++ +RTSL+PGLL+A+ RN + A+FE+ VY EGQ ++A Sbjct: 477 LDLLNPISSDLNTLRTSLIPGLLEASKRNKNLGFKSIALFELGSVYNAQREEGQSLAFLA 536 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERC--RFVDLFDAKADALSVIE----PFVSLDSLRFES 642 G++ G W S R + + FD K LS E PF++ Sbjct: 537 CGLQITPHYPNPKGTPWDFYSFARTLSQIIGPFDLK--PLSTKEYQDHPFLN-------- 586 Query: 643 GAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILD 676 + YHP +S I K LG+ G HP I+ Sbjct: 587 ---TTYHPHQSARIFKDGCS--LGFLGAIHPAIIQ 616 >gi|322379464|ref|ZP_08053834.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter suis HS1] gi|321148173|gb|EFX42703.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter suis HS1] Length = 733 Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 191/695 (27%), Positives = 307/695 (44%), Gaps = 125/695 (17%) Query: 28 IGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 +GLEVE + R + KVL+ E++P+ + ++ ++D+G Q +++VCGA NV G Sbjct: 1 MGLEVESI-CRFNWPQVVVAKVLTKEKHPNAEKLSLCQVDSGS-QVLEIVCGAHNVEAGQ 58 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMEL-------PID 139 A G+ +P N + IRG+ES GM+CS KEL L I+ L P+ Sbjct: 59 FVALALEGAYLPAINTHIKPSIIRGVESFGMICSAKELGLPSIYEGILILDDSLHKSPLI 118 Query: 140 APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL---KEINISCPLS 196 + D+ + ++D+++TPNR DC+ V G+A ++ A KL K + PLS Sbjct: 119 PGIALDQLDFFQ--GALLDIAITPNRGDCLSVLGLAKEIAALYSLKLTLPKIPPLQNPLS 176 Query: 197 ---SESIPLEI---KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALV 250 + +PL + F L+ S L + ++NN+ N +S L+ Sbjct: 177 LNLPQDLPLVLGYASFKLEKSHL--PLEILLTLALQNNLQKN------------PLSNLL 222 Query: 251 DITNYVS--LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 + T Y+S + YP+H+ + D L R K L+ N+ I+S Sbjct: 223 EYTTYLSGVIMHAYPAHI-SLNIQKDSLGFVRVFDAYKELS-----------NIAISSP- 269 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIAR--SGKNLGIITDSRYRFERGVD- 365 D L+E + DP IA NL ++ R RG + Sbjct: 270 ----------------QTQDLDCLLEASFLDPNYIATRLHAHNLKHNALTQ-RTTRGSNP 312 Query: 366 --------LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 LQ ++ SL L + P+ + ++ ++ G+ Sbjct: 313 DVGLAFGILQTLLKRFNIPFSLHLRFLSPPLN-----------PKTLEISAVKIAKILGL 361 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + + +LE LGF V + V +P R D+ + D+ EE+LR G+D+I S PL Sbjct: 362 RLSSKKIQNVLEALGFKVQSQNSSLIVQIPLDRHDITLEEDIAEEVLRFIGLDKIPSTPL 421 Query: 478 PLTQVEDKRNLSLQQSRTRYV-KRVLASRAMM----EVVNWSFISKE--QSVLFGGGQRE 530 L + E TR++ +R LA +A+ EVV++ F KE + + + Q Sbjct: 422 LLFEKEINN-----PHYTRFLFERQLAYKALALQFNEVVHYLFTKKENLEKLGYPTLQEH 476 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK--YMA 588 L++LNPIS+D++ +RTSL+PGLL+A+ RN + A+FE+ VY EGQ ++A Sbjct: 477 LDLLNPISSDLNTLRTSLIPGLLEASKRNKNLGFKSIALFELGSVYNAQREEGQSLAFLA 536 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERC--RFVDLFDAKADALSVIE----PFVSLDSLRFES 642 G++ G W S R + + FD K LS E PF++ Sbjct: 537 CGLQITPHYPNPKGTPWDFYSFARTLSQIIGPFDLK--PLSTKEYQDHPFLN-------- 586 Query: 643 GAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILD 676 + YHP +S I K LG+ G HP I+ Sbjct: 587 ---TTYHPHQSARIFKDGCS--LGFLGAIHPAIIQ 616 >gi|258616335|ref|ZP_05714105.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecium DO] Length = 350 Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 117/356 (32%), Positives = 198/356 (55%), Gaps = 21/356 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDL 58 M + WL ++D ++V+ +++ D ++ G+EVE V E L + +V +PD Sbjct: 1 MLVSYKWLNRYVDLSNVTPKELADKMSVTGIEVEGVTVPEEGLKKIVVGEVKECVPHPDS 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D +I ++D G+ + Q+VCGAPNV+VG+ + A P S I N+ + K+RG S GM Sbjct: 61 DHLSICQVDIGEDELSQIVCGAPNVKVGIKVIVALPNSRI-AGNVKIKKGKMRGQVSNGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS +E+ SD + I +P +A G + YL++ D II++S+TPNR+D + + Sbjct: 120 ICSLQEIGYSDSVIPKEYAEGIYYMPQEAVNGDPVFPYLDMDDSIIELSITPNRADALSM 179 Query: 172 RGIALDLVA-----AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 RG+A ++ A K + S P S + I+ +++D + + ++GVR Sbjct: 180 RGVAYEVGAIYRQTPTFDDEKLVESSRPASDK-----IQVEVEDKEAVPAYQIRIIEGVR 234 Query: 227 NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGE 285 +P W++ L G+R I+ +VD+TNY+ L G P H FD ++ S + VRRA E Sbjct: 235 IQPSPQWLQNLLMNEGIRPINNVVDVTNYILLLFGQPLHAFDYDKLKSKEIFVRRAKENE 294 Query: 286 KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPI 341 ++ LD + +L+ DN+VI + ++AG++GG + + TT V +E AL+DPI Sbjct: 295 TLVTLDGESRELTTDNLVITNGKEPVALAGVMGGLDSEITNETTTVALESALFDPI 350 >gi|315586941|gb|ADU41322.1| phenylalanyl-tRNA synthetase beta subunit [Helicobacter pylori 35A] Length = 764 Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 210/842 (24%), Positives = 380/842 (45%), Gaps = 118/842 (14%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE + ++P +V +E+ P + Sbjct: 1 MKLSVNDLNVFVDVPKDIAKLCEDLSRLGLEVE--SSIPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESYGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG----GR-LSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG G+ L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSGELGFPKINDGILEL--DESVGELVLGKGLNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG--------FAMCCVKG 224 GIA ++ A LK I +++ K DL +LC G + + C Sbjct: 174 GIAREISAFYHTPLKPI--------KALNFTPKSDL--ITLCAGENIESHLAYYLIC--- 220 Query: 225 VRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 N+ + +L ++S D+ N++ + V +A + ++ + Sbjct: 221 --NHSLKTPLNVKLSLAHNNALSE-NDLNNFIEFSMHFSGVVMNAYSL-NITPID----- 271 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIA 344 L++ N E +L ++V I R I KH D + +L+E + DPI+++ Sbjct: 272 ---LSVKNDENNL--ESVYINHQKR-----STIAIKHQDQKDLSEYLLLEASYTDPISLS 321 Query: 345 ---RSGKNLGIITDSR--YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARN 396 + K+ + D+ YR RG + G+ + H+ + IL Sbjct: 322 LKLHALKDKTLQKDNALIYRSARGSNPNLSDGLNFLSTHLKAAILE---------SKQTK 372 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQ 451 K R + F ++ + G+ + E IL+ LGF V + EV P++R Sbjct: 373 HALKDRTLEFKLEDITEILGLAIEEETIQGILKNLGFKVSIKVSNSKPQILEVVAPNFRH 432 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--VKRVLASRAMME 509 D++ D+ EEILR G+D + S+PL V +K++ + + +K + E Sbjct: 433 DIKTIQDIAEEILRFVGIDHLISKPL--DSVSNKKSNPHYDTHRFFENLKHKALACGFKE 490 Query: 510 VVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 V+++ F SKE+ G E LE+ N I+ +++ +RTSL+ GLL A+ RN + Sbjct: 491 VIHYVFYSKEKQQKLGFEVLEDPLELQNSITTELNTLRTSLVCGLLDASLRNKNLGFKSI 550 Query: 568 AIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 A++E VY + E QK ++A+G++K S + G+ W S C + D + Sbjct: 551 ALYEKGSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAECVSKVIGDFSLEK 610 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 L+ P HP +S I + +I+ G + HP ++ L Sbjct: 611 LTTQTPI---------------NHPYQSAKIIQNHKII-GVIAKIHPKVIQELDL----- 649 Query: 686 GFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RL 743 FE Y I + KR ++ S++P RDL I+D++ + +K+ Sbjct: 650 -FESYYAEIDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPN 706 Query: 744 IDDVTVFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 + ++ D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ NA Sbjct: 707 LSEILPLDIFK-----ESHNTIALSVRCVIHSLEKTLNDEEVNSAVQKALEILEKEFNAR 761 Query: 802 LR 803 L+ Sbjct: 762 LK 763 >gi|325141986|gb|EGC64422.1| Phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis 961-5945] Length = 399 Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 121/424 (28%), Positives = 226/424 (53%), Gaps = 35/424 (8%) Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG 432 ++ L+L +CGG A ++ A+ + +++ +K + G+D+P E IL+ LG Sbjct: 1 MERATELVLQICGGAAGEMVEAQGKLPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLG 60 Query: 433 FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI----KSEPLPLTQVEDKRNL 488 + F V+ PS+R D+E +ADL+EEI R+YG + I S L + ++ + R Sbjct: 61 LQPEKTAEGFRVTAPSFRFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETR-- 118 Query: 489 SLQQSRTRY-VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTS 547 R+R+ V +A+R EVV+++F+ ++ F + + NP++A + MR++ Sbjct: 119 -----RSRFAVYNEMAARGYREVVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRST 173 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 L+ GL++ N++R +FE++ V+ +D Q G+ G++ E W Sbjct: 174 LIGGLVEILQNNLNRKQNRVRVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQ----W 229 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVL 664 K+ R D +D KAD +E + ++ F ++G P+ HPGR+ I + + V+ Sbjct: 230 GGKT----RNADFYDIKAD----VENLLKNKAVEFVKTGYPA-LHPGRAANIVSDGK-VI 279 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIV 724 G+ GE HP L + L FE+ + ++ K R + +S PV+RDLAF++ Sbjct: 280 GFVGELHPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-----VSKFQPVRRDLAFVM 334 Query: 725 DQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 + + L+ ++K ++L+ +++VFDV++G L EG KSVA++V++Q +++T D+ + Sbjct: 335 PEAMSHDDLLLVLKGAANKLVQEISVFDVYRGMGLPEGMKSVAVKVILQDMENTLTDEAV 394 Query: 784 RILM 787 L+ Sbjct: 395 EPLI 398 >gi|315932622|gb|EFV11553.1| Phenylalanyl-tRNA synthetase beta subunit [Campylobacter jejuni subsp. jejuni 327] Length = 766 Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 209/829 (25%), Positives = 373/829 (44%), Gaps = 111/829 (13%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 ++S +KI TL SIG+EV++V +A + V ++ + D +I ++D G + + Sbjct: 9 EISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSDKLSICQVDIGS-ETL 67 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--------- 124 Q+VCGA NV G A G+ +P N M + K+RG++S GM+CS EL Sbjct: 68 QIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGMLCSSLELGFEKINEGI 126 Query: 125 MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 ML D+S +EL G L+ Y +D +I+V LTPNR DC+ + GIA DL A Sbjct: 127 MLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCLSIYGIARDLATALNL 180 Query: 185 KLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 LKE P SE++ L + + + + L A+ + ++ N+ + ++ Sbjct: 181 NLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKEEIQTNLLLSLRLAQI 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRACSGEKILALDNQ 293 + +G SI L+ NY + G + +D S S+ + + + GE Sbjct: 238 EGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINLSKQVHGE-------- 286 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 ++ ++ S +GI + C D++ +++E DP+ IA K Sbjct: 287 --------TKVSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVIA-DAKIYHKD 337 Query: 354 TDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 D + YR RG + P L + +LS+ I + Y + + + E+ Sbjct: 338 QDEKMLYRSFRGSE-----PKLNLGMDFLLSIFEQ------IPNLVIYSSSQQILTDKEL 386 Query: 412 KR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADL 459 + G +V ++ L+IL++LGF +I GE V P R D++ +D+ Sbjct: 387 PIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHRPDIKNLSDI 445 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFI 516 EE++RI G+D I S+ L +E R S ++ ++ KR +AS E +++ Sbjct: 446 CEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GYFESLHYVLD 502 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 ++E+ G +L+++NPI+A+++ +RT+LL LL A N + +FE+ V+ Sbjct: 503 NEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELGAVF 562 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + E + I SG++ ++ + E +F D D ++I F Sbjct: 563 NVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKNIIGDF---- 610 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFEVYLDSIP 695 + +S + P I S +I +G+ G H I + L IC E+ LD I Sbjct: 611 --KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC--ELDLDLI- 664 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 R K S + RDL+ ++ + + N I+ ++ ++++ + D++ Sbjct: 665 -----RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYS 719 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 720 DENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 766 >gi|317009661|gb|ADU80241.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori India7] Length = 764 Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 210/837 (25%), Positives = 378/837 (45%), Gaps = 108/837 (12%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MK +++ L +D + K+C+ L+ +GLEVE ++P +V +E+ P + Sbjct: 1 MKLSVNDLSVFVDAPKDIAKLCEDLSCLGLEVESC--IPCVAPKNVVVGKVLEKAPHKNA 58 Query: 61 ---AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 ++ ++ GK + +Q+VCGA NV A G+ I + + ++RG+ES GM Sbjct: 59 EKLSVCQVGVGK-EVLQIVCGAKNVAPNQFVPVALNGALI--GSTTIAKTELRGVESCGM 115 Query: 118 MCSEKELMLSDDSASIMELPIDAPVG-----GRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS EL + I+EL D VG L++Y + ++++SLTPNR DC+ V Sbjct: 116 ICSSSELGFPKINDGILEL--DESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVL 173 Query: 173 GIALDLVAAGLGKLKEIN-ISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 GIA ++ A LK I ++ S+ I L +++ S L + + C N+ Sbjct: 174 GIAREISAFYHTPLKPIKALNFTPKSDLITLHAGENIE-SHL--AYYLVC-----NHSLK 225 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + +L ++S D+ N++ + + +A ++ + L++ Sbjct: 226 TPLNVKLSLAHNNALSE-NDLNNFLEFSAHFSGVIMNAYSLN---------ATPIDLSVK 275 Query: 292 NQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLG 351 N E +L ++V I R I KH D + +L+E + DP++++ L Sbjct: 276 NDENNL--ESVYINHQKR-----STIAIKHQDQKDLSGHLLLEASYIDPVSLSLK---LH 325 Query: 352 IITDSR--------YRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 ++ D YR RG + G+ + H+ + +L K Sbjct: 326 VLKDKTLQKDNALIYRSARGSNPNLSDGLNFLSTHLKAAVLE---------SKQTKHALK 376 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDK----FEVSVPSWRQDVEE 455 R + F ++ + G+ V E IL+ LGF V + E + EV P++R D++ Sbjct: 377 DRTLQFKLEDITEILGLAVEEEKIRDILKSLGFKVSVKEPNSKPQILEVVAPNFRHDIKT 436 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVKRVLASRAMMEVVNWS 514 D+ EEILR G+D + S+ L K N R +K + EV+++ Sbjct: 437 IQDIAEEILRFVGIDNLVSKTLNCIS-NKKSNPHYDTHRFFENLKHKALACGFKEVIHYV 495 Query: 515 FISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F SKE Q + F + LE+ NPI+ +++ +RTSL+ GLL A+ RN + A++E Sbjct: 496 FYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASLRNKNLGFKSIALYEK 555 Query: 573 SHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 VY + E QK ++A+G++K S + G+ W F + A+ +S + Sbjct: 556 GSVYNSKREEIQKLGFLASGLQKKESYPDSKGKAWD------------FYSFAECVSKVI 603 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 SL+ L + P HP +S I + EI+ G + HP + L FE Y Sbjct: 604 GDFSLEKL---TTQPPINHPYQSAKIIQNNEII-GVIAKIHPKVTQELDL------FESY 653 Query: 691 LDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVT 748 I + KR ++ S++P RDL I+D++ + +K+ + ++ Sbjct: 654 YAEIDAFKLKRPAM--LLKPFSIYPSSVRDLTLIIDENTAFSGIKKALKDAQIPNLSEIL 711 Query: 749 VFDVFQGKSLGEGKKSVAIQV--LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 D+F+ E ++A+ V +I L+ T D+++ + + +E + K+ +A L+ Sbjct: 712 PLDIFK-----ESDNAIALSVRCVIHSLEKTLNDEEVNAAVQKALEILEKEFSARLK 763 >gi|153952099|ref|YP_001398031.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter jejuni subsp. doylei 269.97] gi|152939545|gb|ABS44286.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. doylei 269.97] Length = 773 Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 214/844 (25%), Positives = 382/844 (45%), Gaps = 112/844 (13%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T SWL D L+ ++S +KI TL SIG+EV++V ++ + V ++ + D Sbjct: 1 MIITKSWLNDWLELEEISSDKIAKTLNSIGIEVDRVGALKSPDKVVVGYVKEKIKHENSD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +I ++D G + +Q+VCGA NV G A G+ +P N M + K+RG++S GM+ Sbjct: 61 KLSICQVDIGS-ETLQIVCGAANVDAGQFVAVATKGAIMP-NGMEIKEAKLRGVDSCGML 118 Query: 119 CSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCI 169 CS EL ML D+S +EL G L+ Y +D +I+V LTPNR DC+ Sbjct: 119 CSSLELGFEKINEGIMLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCL 172 Query: 170 GVRGIALDLVAAGLGKLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVK 223 + G+A DL A LKE + P SE++ L + + + + L A+ + Sbjct: 173 SIYGVARDLATALNLNLKE---AKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKE 229 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTV 278 ++ N+ + +++ +G SI L+ NY + G + +D S S+ + + Sbjct: 230 EIQTNLLLSLRLAQIEGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINL 286 Query: 279 RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW 338 + GE ++ ++ S +GI + C +++ +++E Sbjct: 287 SKQVHGE----------------TKVSCKDKLLSFSGIFQNNESRCKNDSKIIIIEANYT 330 Query: 339 DPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 DP IA K D + YR RG + P L + +L + I Sbjct: 331 DPSVIA-DAKIYHKDQDEKMLYRSFRGSE-----PKLNLGMDFLLGIFEQ------IPNL 378 Query: 397 ITYKPRKIVFMNSEVKR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEV 444 + Y + + + E+ + G +V ++ L+IL++LGF +I GE V Sbjct: 379 VIYSSSQQILTDKELPIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINV 437 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRV 501 P R D++ +D+ EE++RI G+ I S+ L VE R S+ ++ ++ KR Sbjct: 438 KAPLHRPDIKNLSDICEEVVRIIGIYNIASKGLEF--VEKNRLNSVYKNYIEFLNLRKRA 495 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 +AS E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N Sbjct: 496 VAS-GYFESLHYVLDNEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAK 554 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + IFE+ V+ + E + I SG++ ++ + E +F D Sbjct: 555 NSKKIIKIFELGAVFNVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL-- 607 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL- 680 D ++I F + +S + P I S +I +G+ G H I + L Sbjct: 608 -LDIKNIIGDF------KLKSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENDRDLP 659 Query: 681 SNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV 740 IC E+ LD I K+ K K S + RDL+ ++ + + N I+ + Sbjct: 660 KTYIC--ELDLDLI----KQDFKIAK--PYSKFPAITRDLSVLIPKGFEYNQIKNCIEEL 711 Query: 741 D-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTN 799 + ++++ + D++ ++L E S+ I + + T D+ + MD+I+ N +K Sbjct: 712 NLEMLENFRLVDIYSDENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLG 769 Query: 800 AVLR 803 LR Sbjct: 770 LDLR 773 >gi|315927553|gb|EFV06886.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315929974|gb|EFV09125.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni 305] Length = 766 Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 208/825 (25%), Positives = 375/825 (45%), Gaps = 103/825 (12%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 ++S +KI TL SIG+EV++V +A + V ++ + D +I ++D G + + Sbjct: 9 EISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSDKLSICQVDIGS-ETL 67 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--------- 124 Q+VCGA NV G A G+ I N M + K+RG++S GM+CS EL Sbjct: 68 QIVCGAANVDAGQFVAVATKGA-IMSNGMEIKEAKLRGVDSCGMLCSSLELGFEKINEGI 126 Query: 125 MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 ML D+S +EL G L+ Y +D +I+V LTPNR DC+ + GIA DL AA Sbjct: 127 MLLDESIGKLEL------GRPLNTYEIFNDELIEVELTPNRGDCLSIYGIARDLAAALNL 180 Query: 185 KLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 LKE P SE++ L + + + + L A+ + ++ N+ + ++ Sbjct: 181 NLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIGLKEEIQTNLLLSLRLAQI 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRACSGEKILALDNQ 293 + +G SI L+ NY + G + +D S S+ + + + GE Sbjct: 238 EGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINLSKQVHGE-------- 286 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 ++ ++ S +GI + C D++ +++E DP+ IA K Sbjct: 287 --------TKVSYKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVIA-DAKIYHKD 337 Query: 354 TDSR--YRFERGVD------LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIV 405 D + YR RG + + ++ + + I +L++ ++ I + + P I Sbjct: 338 QDEKMLYRSFRGSEPKLNLGMDFLLGIFEQIPNLVIY---SSSQQILTDKELPIIPISI- 393 Query: 406 FMNSEVKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVEEI 463 + + G +V ++ L+IL++LGF +I GE V P R D++ +D+ EE+ Sbjct: 394 ---EGISDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHRPDIKNLSDICEEV 449 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFISKEQ 520 +RI G+D I S+ L +E R S ++ ++ KR +AS E +++ + E+ Sbjct: 450 VRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GYFESLHYVLDNGEE 506 Query: 521 SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 G +L+++NPI+A+++ +RT+LL LL A N + +FE+ V+ + Sbjct: 507 LKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELGAVFNVNN 566 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 E + I SG++ ++ + E +F D D ++I F + Sbjct: 567 QELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKNIIGDF------KL 612 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQK 699 +S + P I S +I +G+ G H I + L IC E+ LD I Sbjct: 613 KSSKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC--ELDLDLI----- 664 Query: 700 KRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSL 758 R K S + RDL+ ++ + + N I+ ++ ++++ + D++ ++L Sbjct: 665 -RQDFKIAKPYSKFPAITRDLSVLIPKGFEYNQIKNCIEELNLEILENFRLVDIYSDENL 723 Query: 759 GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 724 KEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 766 >gi|28572751|ref|NP_789531.1| phenylalanyl-tRNA synthetase beta chain [Tropheryma whipplei TW08/27] gi|81629793|sp|Q83HH4|SYFB_TROW8 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|28410884|emb|CAD67269.1| phenylalanyl-tRNA synthetase beta chain [Tropheryma whipplei TW08/27] Length = 961 Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 153/519 (29%), Positives = 239/519 (46%), Gaps = 66/519 (12%) Query: 9 KDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVL------------------ 50 + H D V+ E I ++L S+G E E +D E P + +VL Sbjct: 33 RTHTDCPVA-EDILESLLSVGFEGEILDRPELSGPIVVGRVLDFTEEVHSNGKTIRWCKV 91 Query: 51 -------------SVERNPDLDCAIL-RIDTGKHQEIQ-VVCGAPNVRVGLLGVWAPPGS 95 S + NP DT E + +VCGA N G L V PGS Sbjct: 92 RVCAPVQPNNTPLSKDCNPSTQTGNFSNADTNSALETRDIVCGASNFSKGDLVVVTLPGS 151 Query: 96 CIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS-------- 147 +P V RK+ G S GM+ SEKEL + D+ I+ L + G LS Sbjct: 152 NLP-GGFHVTARKVYGHLSDGMIASEKELGVGDNHDGILRL-AEVFQGDELSKIREGDNA 209 Query: 148 -DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE-IK 205 + L L+D + VS+TP+R + +RGIA + A I S PL + +P + Sbjct: 210 LELLALTDSAVAVSITPDRGYAMSIRGIAREYALA-----NNIPFSDPLPDDVLPAGGLS 264 Query: 206 FDLDDSSLCK--GFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 DL CK F ++ + NN P WM +RL+ G+RS+ +VDITNYV ++ G P Sbjct: 265 IDLR----CKPNAFFTLLIQEIENNQTPQWMVRRLQLAGIRSVCPVVDITNYVMVETGQP 320 Query: 264 SHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG 323 H +D I L VR A E + +D + +L D++V+A S+AG+IGG + Sbjct: 321 LHAYDYDAIQGSLCVRTADKKETLDTIDGRRLELHTDDLVVADANGALSLAGVIGGSRSR 380 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 +T +L+E ++PI+I+ S + + T++ RF R VD+ L LI L Sbjct: 381 VTSDTKRILLEAGNFNPIDISLSSRRHKLYTEASARFARSVDILIAQRALARAAELIRDL 440 Query: 384 CGGTASDICIARNITYKPRKIVFMNS-EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK- 441 G +++ A I Y + + +++ +++R+ G E+ + L +G V + D Sbjct: 441 ASGDITELGSAY-INYTQQSPILLSTLDIERVVGCCFTREEIMSSLRAIGCDVSCDSDHS 499 Query: 442 ------FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 V+ PS+R D+ DL EE++R+ G ++I S Sbjct: 500 TPDTQVMLVTPPSFRPDLVNVQDLAEEVIRVIGFNRIPS 538 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 66/307 (21%), Positives = 127/307 (41%), Gaps = 52/307 (16%) Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------------ 576 R + + NPI A +R SL+PGLL+ RN+ R + D +IFE+ V+ Sbjct: 674 RAISLHNPIDATEGYLRRSLIPGLLQCAHRNLSRGLCDLSIFEIGRVFLGQLRTSNLIGC 733 Query: 577 ----------ENDTPEG-----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 +T E Q Y + ++ GS+ I+ K + D+FD+ Sbjct: 734 NSDSTCNACSRKNTIESMNEVYQPYTVSVLQTGSA-IQKQPYTEGRKYD----LADVFDS 788 Query: 622 K---ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 A L V FV + P+ +HPGR + + GY G+ P + + Sbjct: 789 ARQIARGLGVDFHFV-------QDKHPA-FHPGRCAKVICKHHHI-GYTGQILPTLANKH 839 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFIVDQHIPAGTLVNII 737 L + + E+ LD + + ++++V P + L + +I A ++++++ Sbjct: 840 NLPDNVFACEINLDLV----AQLGCSQEIVKTLPTSPAATQHLTLTLGNNIAAASVISVV 895 Query: 738 K-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 K L++D+ + D ++ + KKS+ + + + T + + + V Sbjct: 896 KEGAGELLEDIRLIDEYKHEE--SDKKSLTFAMRFRDKEKTLTAQRVNLAKENAVRLASS 953 Query: 797 KTNAVLR 803 K A++R Sbjct: 954 KFGAIMR 960 >gi|330861376|emb|CBX71610.1| hypothetical protein YEW_BN07070 [Yersinia enterocolitica W22703] Length = 296 Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 171/299 (57%), Gaps = 6/299 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ +S + + +T GLEV+ V+ + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAISSDALAHQITMAGLEVDGVEAVAGEFNGVVVGEVVECGQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVAVATVGAVLP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +S+D I+ELP+DAP+G L DYL L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISEDHDGIIELPVDAPIGVNLRDYLNLDDKTIEISVTPNRADCLGIIGVARDV 179 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA-PNWMRQR 237 L E ++ SS L I+ D + C + VKG+ A P WMR++ Sbjct: 180 AVLNKLPLTEPEMNPVASSLKDSLLIRVDAPQA--CPRYLGRVVKGINVKTATPLWMREK 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 L+ G+RSI +VDITN+V L+ G P H FD RI + VR+A GE + LD+ + + Sbjct: 238 LRRCGIRSIDPVVDITNFVLLELGQPMHAFDLDRIDGGIIVRQATEGEDLTLLDDTKLN 296 >gi|330850891|ref|YP_004376641.1| phenylalanine tRNA synthetase [Fistulifera sp. JPCC DA0580] gi|328835711|dbj|BAK19007.1| phenylalanine tRNA synthetase [Fistulifera sp. JPCC DA0580] Length = 708 Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 171/699 (24%), Positives = 323/699 (46%), Gaps = 88/699 (12%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD----LDDS 211 ++D+S T NRSD + ++GI+ ++ A L K +N+S L +I +D S Sbjct: 48 VLDISATANRSDSLSIQGISSEI--AALLK-TSLNLSNHLIQSEKLKQIIWDKAATFSIS 104 Query: 212 SLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + C V+ + + P W+ ++L + G+ + LVD +Y+ L+ GYP +D + Sbjct: 105 TGCTTLLSVSVENLVDKTIPKWITKKLLSSGITPSNTLVDFQSYILLETGYPFAFYDFDK 164 Query: 272 ISDV-------LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 I L+V RA + +A +N+ YDL +++ ++ SI GII + C Sbjct: 165 IRKKIGKVDFKLSVSRAAGNDSFVASNNESYDLDQSILLLKANEIPISIGGIIENQEFSC 224 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI---- 380 +++TT +L+E +++ I + + LG+ TD R+E+ + +I L ++SL+ Sbjct: 225 ENSTTSILIEASIFTAAIIRQQSRKLGVRTDRSARYEKSLKNTYLIESLYRLISLLRISN 284 Query: 381 --------------------LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV- 419 +SL GT +I P K S K ID Sbjct: 285 PKLTIKLRTIIKENEQVINPISLNYGTLKEIL-------GPTK----KSSNKNFEYIDSK 333 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQ--IKSEP 476 IED L L + + + + V+VP R +D+ + DL+EEI R++G + I Sbjct: 334 TIEDYLNRL-NCKYDYNEKTNAWRVTVPHSRSEDLTREIDLIEEIGRLHGFNNFLITLPK 392 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + +DK + Q+ + L + + E++++S ++ E++ L ++ ++NP Sbjct: 393 LKVIGTKDKSYETRQK-----LTSCLLNLGLNELIHYSLVN-EKTFL----TNQISVINP 442 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--QKYMAAGIRKG 594 + ++ + +R SLLP L++ + N ++ A FE HV+ DT +K AGI G Sbjct: 443 LVSEYATLRLSLLPNLIRTSQENWKQSNAIINGFEYGHVFSLDTNTNFKEKEHVAGILGG 502 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKAD--------ALSVIEPFVSLDSLRFESGAPS 646 G+ W+ E + V F+AK +SVI S+ S + Sbjct: 503 F----GTKTTWA----ESEQVVSWFEAKGRIERLFEQLNVSVIWKSTSVCSNHLQ----E 550 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +H R I + ++G FG+ HP + + +S+ + FE LD I ++ + Sbjct: 551 IFHKYRHAEIYLHSGTLIGNFGQVHPILANDLSISSNLYLFEFDLDIIKVAL-ENNNVSI 609 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 SS + +D++FIV Q I L ++ N + + + + D ++G S+ + S+ Sbjct: 610 YKEYSSYPKIIKDISFIVKQDIEFDLLKQLLYLNGSQFLSKINLLDEYKGNSIPKDHTSL 669 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 +Q++ Q + T ++ +I +++ I + ++ NA +R+ Sbjct: 670 CLQLIFQSNEKTLQNSEIEEILNNIRFVLTQEFNATIRN 708 >gi|93140704|sp|Q8EUJ9|SYFB_MYCPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 792 Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 149/572 (26%), Positives = 279/572 (48%), Gaps = 34/572 (5%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRIDTGKHQ 71 VS +++ L SIG+EVE + + ++ VE++P+ D C + + H Sbjct: 18 VSNQELETMLNSIGVEVENIIKFPRTENLIVGEIKKVEKHPNADKLNICEVF-FENKIHV 76 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 ++CGA NVR GL + A G+ + + +I + + G++S GM+C+ EL D Sbjct: 77 ---IICGAQNVRPGLKVIVAKVGTKMLDGRLI-EAKDLLGVKSNGMICAYAELTTKTDVC 132 Query: 132 SIMELP--IDAPVGGRLSD-----YLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 S E+ I+ +L+D Y+ L D I+D+S+ NR++ GV IA DL++ Sbjct: 133 SYDEIENIIELDNDAKLNDIDPLKYIGLDDEILDLSVPSNRNELNGVIPIAYDLISLYFP 192 Query: 185 KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW-MRQRLKAVGL 243 K K I+ S IK ++D LC+ F + V V + NW ++ L G+ Sbjct: 193 KSK-IDFSLKNIENQKKTSIKINID-KELCRFFGVIDVSNVEIKTS-NWKIKSFLLNCGI 249 Query: 244 RSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVV 303 I+ +VDITN ++ P H +D ++ + V EK LAL+++EY + + V Sbjct: 250 TPINTIVDITNLNAIITSVPCHAYDKDKLGKEIAVSLNAHKEKFLALNDKEYVVENKSAV 309 Query: 304 -IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 + S+ +I S+A +IG K ++T +VL E+ +D + I + LGI T++ + Sbjct: 310 SVISNNKIVSLASVIGSKENSISNSTKNVLFEIGNFDNMAIRDASNKLGIKTNASTLGSK 369 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIE 422 + L +++ L+ L +S + + K I F + ++ L G +E Sbjct: 370 TIPLWITYKSFDYLIGLLKDLNIKVSSVNYVGDKL--KDNLIDFDSQTIQDLLGQKTDVE 427 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 +L++ +GF+ +G+ +V P +R+D+E +DLVEE+ + V+ ++ +P+ + V Sbjct: 428 KNLKL---MGFNFVGK----KVKAPVYREDLENISDLVEELTKKINVNNLELKPIESSFV 480 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISAD 540 + + + ++++ ++ V + S E + F G ++ ++I+NPIS++ Sbjct: 481 DFE--FDNFEENWNFLEKYFINKGFTLVKTLNLTSLENNKAFNLFGSKKSIKIMNPISSE 538 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 R +L+ L+ N I + IFE+ Sbjct: 539 REYFRNNLIQQHLEVLSNNYAHKINLYNIFEI 570 >gi|315124393|ref|YP_004066397.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315018115|gb|ADT66208.1| phenylalanyl-tRNA synthetase, beta subunit [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 766 Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 207/829 (24%), Positives = 371/829 (44%), Gaps = 111/829 (13%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 ++S +KI TL SIG+EV++V +A + V ++ + D +I ++D G + + Sbjct: 9 EISSDKIAKTLNSIGIEVDRVGALKAPDKVVVGYVKEKIKHENSDKLSICQVDIGS-ETL 67 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--------- 124 Q+VCGA NV G A + +P N M + K+RG++S GM+CS EL Sbjct: 68 QIVCGAANVDAGQFVAVATKDAIMP-NGMEIKEAKLRGVDSCGMLCSSLELGFEKINEGI 126 Query: 125 MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 ML D+S +EL G L+ Y +D +I+V LTPNR DC+ + GIA DL A Sbjct: 127 MLLDESIGKLEL------GRALNTYEIFNDELIEVELTPNRGDCLSIYGIARDLATALNL 180 Query: 185 KLKEINISCPL-SSESIP-----LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 LKE P SE++ L + + + + L A+ + ++ N+ + ++ Sbjct: 181 NLKE---PKPFKESENVLGIGRILRLAAEKELNGLYNYRAIELKEEIQTNLLLSLRLAQI 237 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-----VLTVRRACSGEKILALDNQ 293 + +G SI L+ NY + G + +D S S+ + + + GE Sbjct: 238 EGLGKNSIENLL---NYATHSTGVLFNAYDLSSFSEKDEEFTINLSKQVHGE-------- 286 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 ++ ++ S +GI + C D++ +++E DP+ IA K Sbjct: 287 --------TKVSCKDKLLSFSGIFQNNESRCKDDSKIIIIEANYTDPLVIA-DAKIYHKD 337 Query: 354 TDSR--YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 D + YR RG + P L + +LS+ I + Y + + + E+ Sbjct: 338 QDEKMLYRSFRGSE-----PKLNLGMDFLLSIFEQ------IPNLVIYSSSQQILTDKEL 386 Query: 412 KR----------LSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADL 459 + G +V ++ L+IL++LGF +I GE V P R D++ +D+ Sbjct: 387 PIIPISIESIGDIIGQNVDKDEVLKILKKLGFELILSGE-GLINVKAPLHRPDIKNLSDI 445 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV---KRVLASRAMMEVVNWSFI 516 EE++RI G+D I S+ L +E R S ++ ++ KR +AS E +++ Sbjct: 446 CEEVVRIIGIDNIASKGLEF--IEKNRLNSAYKNYIEFLNLRKRAVAS-GYFESLHYVLD 502 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 ++E+ G +L+++NPI+A+++ +RT+LL LL A N + +FE+ V+ Sbjct: 503 NEEELKRLGFDSVKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSKKIIKLFELGAVF 562 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 + E + I SG++ ++ + E +F D D ++I F Sbjct: 563 NVNNQELNR-----IAFIHSGLKEEAKISNKAKPESVQFYDFL---LDIKNIIGDF---- 610 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGL-SNPICGFEVYLDSIP 695 + + + P I S +I +G+ G H I + L IC E+ LD I Sbjct: 611 --KLNASKYNILSPYEQADIYLS-DIKVGFIGRLHLKIENERDLPKTYIC--ELDLDLI- 664 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 R K S + RDL+ ++ + + N I+ ++ ++++ + D++ Sbjct: 665 -----RQDFKIAKPYSKFPAITRDLSVLIHKGFEYNQIKNCIEELNLEILENFRLVDIYS 719 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 ++L E S+ I + + T D+ + MD+I+ N +K LR Sbjct: 720 DENLKEF-YSITISFSFRDINKTLEDNQVNECMDKIL-NTLKNLGLDLR 766 >gi|26554375|ref|NP_758309.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma penetrans HF-2] gi|26454385|dbj|BAC44713.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma penetrans HF-2] Length = 767 Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 147/563 (26%), Positives = 274/563 (48%), Gaps = 34/563 (6%) Query: 25 LTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRIDTGKHQEIQVVCGAP 80 L SIG+EVE + + ++ VE++P+ D C + + H ++CGA Sbjct: 2 LNSIGVEVENIIKFPRTENLIVGEIKKVEKHPNADKLNICEVF-FENKIHV---IICGAQ 57 Query: 81 NVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP--I 138 NVR GL + A G+ + + +I + + G++S GM+C+ EL D S E+ I Sbjct: 58 NVRPGLKVIVAKVGTKMLDGRLI-EAKDLLGVKSNGMICAYAELTTKTDVCSYDEIENII 116 Query: 139 DAPVGGRLSD-----YLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISC 193 + +L+D Y+ L D I+D+S+ NR++ GV IA DL++ K K I+ S Sbjct: 117 ELDNDAKLNDIDPLKYIGLDDEILDLSVPSNRNELNGVIPIAYDLISLYFPKSK-IDFSL 175 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW-MRQRLKAVGLRSISALVDI 252 IK ++D LC+ F + V V + NW ++ L G+ I+ +VDI Sbjct: 176 KNIENQKKTSIKINID-KELCRFFGVIDVSNVEIKTS-NWKIKSFLLNCGITPINTIVDI 233 Query: 253 TNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVV-IASDGRIQ 311 TN ++ P H +D ++ + V EK LAL+++EY + + V + S+ +I Sbjct: 234 TNLNAIITSVPCHAYDKDKLGKEIAVSLNAHKEKFLALNDKEYVVENKSAVSVISNNKIV 293 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S+A +IG K ++T +VL E+ +D + I + LGI T++ + + L Sbjct: 294 SLASVIGSKENSISNSTKNVLFEIGNFDNMAIRDASNKLGIKTNASTLGSKTIPLWITYK 353 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 +++ L+ L +S + + K I F + ++ L G +E +L++ + Sbjct: 354 SFDYLIGLLKDLNIKVSSVNYVGDKL--KDNLIDFDSQTIQDLLGQKTDVEKNLKL---M 408 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 GF+ +G+ +V P +R+D+E +DLVEE+ + V+ ++ +P+ + V+ + Sbjct: 409 GFNFVGK----KVKAPVYREDLENISDLVEELTKKINVNNLELKPIESSFVDFE--FDNF 462 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMSNMRTSLL 549 + ++++ ++ V + S E + F G ++ ++I+NPIS++ R +L+ Sbjct: 463 EENWNFLEKYFINKGFTLVKTLNLTSLENNKAFNLFGSKKSIKIMNPISSEREYFRNNLI 522 Query: 550 PGLLKATGRNVDRAIADFAIFEV 572 L+ N I + IFE+ Sbjct: 523 QQHLEVLSNNYAHKINLYNIFEI 545 >gi|145641675|ref|ZP_01797252.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae R3021] gi|145273722|gb|EDK13591.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae 22.4-21] Length = 286 Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 173/292 (59%), Gaps = 14/292 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ W+++ ++ VS E++C+ +T +GLEV+ V+ + + +V+ ++PD D Sbjct: 1 MKFSEQWVREWVNPAVSTEQLCEQITMLGLEVDGVEAVAGTFNGVVVGEVVECAQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGDRLLDIVCGAPNCRQGLKVACATEGAVLP-GDFKIKKTKLRGQPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL + ++ I+ELP+DAP+G L +YL L D I++SLTPNR+DC+ + GIA + Sbjct: 120 CSFSELGIDIEADGIIELPLDAPIGTDLREYLALDDNAIEISLTPNRADCLSIAGIARE- 178 Query: 179 VAAGLGKLKEINISCPLSSESIPL----EIKFDLDDSSLCKGFAMCCVKGVRNNV-APNW 233 +G + + ++ P E++P +++ DL C + + +K V +P W Sbjct: 179 ----IGVVNKQLVNQP-HFEAVPATISDKVQIDLQAPEACPRYLLRVIKNVNVKAPSPMW 233 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGE 285 M+++L+ G+RSI +VDITNY+ L+ G P H FDA++++ + VR A G+ Sbjct: 234 MQEKLRRCGIRSIDPIVDITNYILLEFGQPMHAFDAAKVTQPVQVRFAKEGK 285 >gi|196228609|ref|ZP_03127475.1| phenylalanyl-tRNA synthetase, beta subunit [Chthoniobacter flavus Ellin428] gi|196226890|gb|EDY21394.1| phenylalanyl-tRNA synthetase, beta subunit [Chthoniobacter flavus Ellin428] Length = 606 Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 162/621 (26%), Positives = 282/621 (45%), Gaps = 64/621 (10%) Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C+ + + V+ +P+W+R++L++VGLR I+ +VDITNYV + G P H FDA R+ Sbjct: 18 CQLYTALEISNVQVRPSPDWLRRKLESVGLRPINNIVDITNYVMFELGQPLHAFDADRLD 77 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 + VR GE+ +ALD + Y LSP ++VIA + R ++ G++GG+ +G + T ++++ Sbjct: 78 GDIRVRVGAEGEEFVALDGKTYKLSPQHIVIADEKRALALGGVMGGEGSGVTETTHNIIL 137 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E A +D I R+ + LG+ +DS YRFERGVD+ G+I + LIL + GGT D+ I Sbjct: 138 ESAHFDGPTIRRTSRTLGLASDSSYRFERGVDIDGVILASQRAAGLILEIAGGTIGDLGI 197 Query: 394 ARN----ITYKPRKIVFMN-------------SEVKRLSGIDVPIEDSLRILERLGFSVI 436 + + P ++ N V L G+++P IL GF + Sbjct: 198 GHGPDSRVAFDPAAVLHENDGTVFTHTVALRPQRVALLLGLELPEARIDAILT--GFGLQ 255 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 +E +PS+R D++ + DL+EEI R+ G++ + + Q R Sbjct: 256 KAEGGWE--IPSFRPDLQREIDLIEEIARVVGIEAVPAR--AQAQFAPASATDRAYDRAM 311 Query: 497 YVKRVLASRAMMEVVNWSFISKEQ---SVLFGGGQRELEILNPISADMSNMRTSLLPGLL 553 ++R L ++ E I + +L + + NP++ + +R LLPGLL Sbjct: 312 SLRRNLVAQGFAEARTLMLIGEAMPGLGLLHDLPENRRRVKNPMNDEQVILRPGLLPGLL 371 Query: 554 KATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW--SDKSEE 611 +A NV + EV V+ E ++A + SG G+ R W + SE Sbjct: 372 QALRDNVRAGAKMVRLCEVGRVFSAQGAEESTHLALVM----SG-PGAERSWRAGEGSE- 425 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI-----VLGY 666 VD F K +++ GA + + + + + I +G+ Sbjct: 426 ----VDFFQLKGVVTALL-------------GAQTTFAADENSALALALAIHVDGKPVGF 468 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 G+ P ++P+ E+ L ++P + KK + RD+A + Sbjct: 469 AGQLWPKDARSIDATSPVLFAEIDLGALP----ALSTVKKYREIPRFPATARDIALLAPL 524 Query: 727 HIPAGTLVNIIKNVDR-LIDDVTVFDVF---QGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + + ++ + L+ DV +FDVF G + KKS+A + + + T D+ Sbjct: 525 QLAHAQIEQTLRGANEPLLADVELFDVFADPSGARIPADKKSLAYSLTYRSTERTLTADE 584 Query: 783 IRILMDRIVENVVKKTNAVLR 803 + R+ E + LR Sbjct: 585 VNAAHTRLKERLKTALAVTLR 605 >gi|268679250|ref|YP_003303681.1| phenylalanyl-tRNA synthetase subunit beta [Sulfurospirillum deleyianum DSM 6946] gi|268617281|gb|ACZ11646.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfurospirillum deleyianum DSM 6946] Length = 779 Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 213/836 (25%), Positives = 373/836 (44%), Gaps = 90/836 (10%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL + ++ D + +KI L +IGLEV+ V + +VLS E++P+ D Sbjct: 1 MIVTKQWLNEWIEIDAIDTDKIVLALNAIGLEVDGVHQLRLPQNVVVGEVLSCEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G+ + Q+VCGA NV G A G+ +P + + + K+R +ES GM+ Sbjct: 61 KLNVCQVNVGESVQ-QIVCGAKNVAAGQKVAVALIGAELP-DGIKIKKAKLRDVESCGMI 118 Query: 119 CSEKELMLS--DDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA 175 CS EL L +D I++ I A +G L DY L+D +I++ LTPNR DC + G+A Sbjct: 119 CSSTELGLPKINDGIMILDESIGALEIGKPLCDYPLLNDDVIEIGLTPNRGDCQSIYGVA 178 Query: 176 LDLVAAGLGKLKEINI-----SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 DL ++K +N + P + L+ L+ S + K F + Sbjct: 179 RDLSVYFDLEVKTLNQKEEEENQPGVGRVLHLQGSEALNSSYMYKVFDNTEI------AV 232 Query: 231 PNWMRQRLKAVGLRS---ISALVDITNYVS--LDRGYPSHVF-DASRISDVLTVRRACSG 284 P + RL + S + L+D + YV+ L R Y F + + ++ ++ + Sbjct: 233 PLLVELRLGIAEVESSCLLGKLIDYSTYVTGVLLRAYNHACFCEQEDKAKIVIIKDENNL 292 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD--VLVEVALWDPIN 342 + + ALD ++ +I GI + + C N D ++VE P Sbjct: 293 DALYALDKEKV----------------AITGI--AQMSQCKANALDKRIIVEANYTHPEI 334 Query: 343 IARSGKNLGIITDSR-YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--RNITY 399 IA N + D YR RG + P L + + + +S + A + + + Sbjct: 335 IASLSANKKLGADKHLYRSSRGSE-----PSLGFGIHYFMKMLTKRSSVMFYADAQQMIH 389 Query: 400 --KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEE 455 + R + S++ + G ++P ++IL+ LGF V E D V +P +R DV Sbjct: 390 DVEERVLNVHQSDLTAMIGEEIPKSRIIKILKHLGFGVNFAFEQDVMNVKIPQFRTDVVN 449 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWS 514 D+ EEI+RI G+D I S+P + + K N + R + R A A E +++ Sbjct: 450 VQDICEEIVRIVGIDNITSKPFEFAE-KSKINQPYLDFKKRQMYRYRAVAAGFFETLHFV 508 Query: 515 FISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 F E++ F + E LE+ NPI+++++ +R+SL+P +L A N+ A+FEV Sbjct: 509 FDDSEKAKQFHLPRLEEALEVANPITSELNTLRSSLIPNILNAVSNNLKFGKKRVALFEV 568 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSG---IEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 V+ E +K A + G +G I G+ SE +D F + +V+ Sbjct: 569 GSVFSAKREESKK--IAFVFSGENGLPEIANHGK----PSE-----IDFFAFASKIQNVL 617 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFE 688 F L + +G S Y I A G+ + + L+ IC Sbjct: 618 GHFTLLPFVEV-NGLCSPYEAACVIIDGVEA----GFMARVNVQVEKELDLARTYICE-- 670 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDV 747 LD +S ++ + S L RDL+ +VD + L I + + + Sbjct: 671 --LDFNALSYGRKIAKE----YSKLPSSSRDLSLLVDVTMQYAQLEAFINTIAPKELIKF 724 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 V D + +SLG K S+ +++ Q + TF +++I ++++++ + +K +R Sbjct: 725 AVIDRYVHESLG-NKVSLTLKLQFQSMDKTFEEEEIASMVEKLLLQIQEKFGITIR 779 >gi|90994537|ref|YP_537027.1| phenylalanyl-tRNA synthetase beta chain [Porphyra yezoensis] gi|122244618|sp|Q1XDE1|SYFB_PORYE RecName: Full=Phenylalanyl-tRNA synthetase beta chain, chloroplastic; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|90819101|dbj|BAE92470.1| phenylalanine tRNA synthetase [Porphyra yezoensis] Length = 719 Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 165/681 (24%), Positives = 317/681 (46%), Gaps = 60/681 (8%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 D I+D+S T NRSD + + G++ ++ A + ++ I+ P+ E D Sbjct: 67 DHILDISSTANRSDVLSMIGLSREVSALTGSSMFQLYIN-PIIDIFSKKETIISNHDLLN 125 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C + + +R +P+W++ RL + G + L DI+NY+ L G P ++ D ++I+ Sbjct: 126 CDNYFAAIIDEIRVKDSPDWLKNRLLSSGFTHRNLLTDISNYIMLKWGQPINIIDLNKIN 185 Query: 274 DV-----LTVRRAC---SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 ++ LT+R S ++I L+N+ +L+ + +V + + SIAGI D Sbjct: 186 NMNHKNSLTIRSNFPLGSNDQI-KLNNENIELNKNILVTQVNTNVTSIAGIGSNSDFDTD 244 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 NT +LVE A++ + +S + L I T+S R ERG+++ ++LI L Sbjct: 245 YNTKSILVESAIFKQSVVRKSSRVLNIRTESSIRQERGLNVDNWKNAHFEALALITDLTC 304 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI-----------EDSLRILERLGFS 434 G D IT I N +K++ I PI E+ IL L F Sbjct: 305 GNIRDTFCREKITDHALNI---NLSIKKVHDILGPIMYNGQTRFLFFEEIQNILHSLNFD 361 Query: 435 VIGE-YDKFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 +I + + EV+VP++R +DV + D++EEI RIYG + +S + ++ + LS ++ Sbjct: 362 LIYQNKENIEVTVPNYRREDVFREIDVIEEIARIYGYHKFRS---SVPNIQFNKRLSTKR 418 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGL 552 + +L + + E+V++S I + ++ NP+ D SN+R SLL GL Sbjct: 419 KFIDKSRSILRNLGLTELVHYSLIKSKGNIALN---------NPLIQDYSNLRGSLLEGL 469 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPE-GQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 +++ N+ ++ FE+ V+ ND + + A I G+ I + WS + Sbjct: 470 IESNLYNIKQSNQTIDSFEIGTVFHNDQNKIVETTNLAIILGGNLDIRST---WSHPAHS 526 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFE-------SGAPSWYHPGRSGIIKTSAEIVL 664 ++ ++AK ++E F + + E G + G+ + I++ Sbjct: 527 ----LNWYEAKG----IVENFFQRLNRQIEWTKKDILDGRIKFIQKGKFATL-IYNNIII 577 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP-VKRDLAFI 723 G F E + GL+ + EV L+ + + + S +P + RDL+ I Sbjct: 578 GIFSELNQATYSELGLNTKLFFLEVNLNILEDCHNEFNYLSYQIQPYSKYPSIIRDLSLI 637 Query: 724 VDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 + +++ L+ ++ D+ ++ T+FD + +S+G+ KKS+ ++ + + T + + Sbjct: 638 IPKNMEIKYLLKLLDQFYDKDLESTTLFDQYIDESIGKEKKSIGLRFTYRSNEKTLTNSE 697 Query: 783 IRILMDRIVENVVKKTNAVLR 803 I ++ + +VK+ N +R Sbjct: 698 IDYKQHQLQKKIVKQLNLKIR 718 >gi|57167928|ref|ZP_00367068.1| phenylalanyl-tRNA synthetase, beta subunit, putative [Campylobacter coli RM2228] gi|57021050|gb|EAL57714.1| phenylalanyl-tRNA synthetase, beta subunit, putative [Campylobacter coli RM2228] Length = 773 Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 205/830 (24%), Positives = 371/830 (44%), Gaps = 105/830 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTI--VKVLSVERNPD 57 M T SWL D LD D SL+ I TL SIG+EV+K+ + + VK N D Sbjct: 1 MIITKSWLSDWLDFEDKSLDDIAHTLNSIGIEVDKICTLKVPDKIVVGFVKEKVKHENSD 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 +I ++D G ++ +Q+VCGA NV G A G+ +P N M + K+RG++S GM Sbjct: 61 -KLSICQVDVG-NEILQIVCGAQNVAQGQFVAVALKGALMP-NGMEIKEAKLRGVDSCGM 117 Query: 118 MCSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +CS EL ML DDS +EL G L+ Y +D +I+V LTPNR DC Sbjct: 118 LCSSTELGFEKINDGIMLLDDSIGKLEL------GKALNSYEIFNDGLIEVELTPNRGDC 171 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSS-ESIP-----LEIKFDLDDSSLCKGFAMCCV 222 + + GIA DL A LKE P E++ L + + + +SL A+ Sbjct: 172 LSIYGIARDLAVALNLNLKE---KPPFKEGENVLGIGRILRLSAEKELNSLYNYRAIELK 228 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 + ++ N+ + +++ G I L+ NY + G + +D + Sbjct: 229 EKIQTNLLISLRLAQIENFGKNPIENLL---NYATHSTGVLFNAYDLNSFYK-------- 277 Query: 283 SGEKILALDNQEYDLS-----PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 +N+E+ S I+ + S++GI + C +++ +++E Sbjct: 278 --------ENEEFTFSLVKETRGETKISYQDELLSVSGIYQEEKFKCKEDSKIIIIEANY 329 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVD------LQGMIPVLKHIVSLILSLCGGTASDI 391 DP+ II D++ +++ + +G P L + +LS+ + I Sbjct: 330 TDPM----------IIADAKMAYKKQDEQTIYRSFRGSEPKLNLGMDFLLSVLEKNPNLI 379 Query: 392 CIARN---ITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSV 446 + + IT K + ++ E + + G ++ ++ L+IL++LGF +I D V Sbjct: 380 IYSSSQQIITNKELSNIAISIESINKTIGQEIDKDEVLKILKKLGFELIISADGLVNVKA 439 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV--KRVLAS 504 P R D++ AD+ EE++RI G+D I S+ L VE R S ++ V ++ + Sbjct: 440 PMHRPDIKNLADICEEVVRIIGIDNIASKGLEF--VEKNRLNSTYKNYKELVELRKKAVA 497 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 498 NGYFESLHYVLDNEEELKSLGFNPIKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSK 557 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +FE+ V+ + E I SG + ++ S+K+ + V+ +D D Sbjct: 558 KIIKLFELGVVFGTNNEE-----LNHIAFVHSGYQEEPKI-SNKA--KPELVNFYDFLLD 609 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG-LSNP 683 ++I F + ++ P I ++ +G+ G H I + L Sbjct: 610 LKNIIGDF------KLKASKHDILSPYEQADIYLK-DLKIGFAGRLHLKIENERDLLKTY 662 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-R 742 IC ++ L K K K S + RDL+ ++ + + N I+ +D Sbjct: 663 ICELDLNL------IKHHFKLAKPY--SKFPSISRDLSILIPKGFEYEKIKNCIEELDLE 714 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +++ + D++ SL E S+ ++ + + + T + + MD+I++ Sbjct: 715 NLENFRLVDLYSDASL-ENSYSLTLKFVFRDMNKTLEEAQVAEHMDKILQ 763 >gi|299830414|ref|YP_003734629.1| phenylalanyl-tRNA synthetase beta subunit [Kryptoperidinium foliaceum] gi|297385116|gb|ADI40414.1| phenylalanyl-tRNA synthetase beta subunit [Kryptoperidinium foliaceum] Length = 706 Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 176/690 (25%), Positives = 327/690 (47%), Gaps = 76/690 (11%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS---CPLSSESIPLEIKFDLDDSSL 213 ++VS T NRSD + ++G++L++ A K+++ + C S + L +K + Sbjct: 49 LEVSSTANRSDSLSIQGLSLEMAALLNQTPKKLDYTVKTCSWSDQLQSLPVKSSIKKD-- 106 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C GF ++ V N +P W++Q+L A GL + L D NY+ L+ GYP +D ++ Sbjct: 107 CSGFIGLTIENVTNVTSPKWLQQKLLASGLAVENNLTDFQNYLVLETGYPLEFYDLDQLY 166 Query: 274 DV-------LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDD 326 L+++ A LA + +EY L+ V+ ++ SIAGII + D Sbjct: 167 SKLNSSKIHLSLQNATKTTSFLANNEKEYLLNDLISVVCANEVPISIAGIISSATSHYSD 226 Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI------ 380 T +LVE ++++ I + + LG+ TD R+E+ + ++ + VSL+ Sbjct: 227 QTKTLLVEASIFNAAKIRQQSRQLGLRTDRSSRYEKSLKNITLLESVYRFVSLLRIANPN 286 Query: 381 ----LSLCGGTASDICIARNITYKPRKIVF---MNSEVKRLSGIDVPIEDSLRILERLGF 433 L ++ I + Y+ K V NS V ++ I +P D L RL F Sbjct: 287 LQCKLHTISEFKNESSIKITLDYQRVKQVLGPIKNSTVNEIAYI-LP-NDITNALNRLQF 344 Query: 434 SVIGEYD----KFEVSVPSWR-QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 V YD K+E+ +P+ R +D+ + D++EEI RIYG + + LP + K+++ Sbjct: 345 QVT--YDSTNLKWEILIPALRNEDIIREIDVIEEIGRIYGFNNFLTR-LPNVKTIGKKDI 401 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSL 548 Q+R ++ +L E++ +S I +E + E+ +LNP+ D S++R SL Sbjct: 402 DY-QTRQKFTSALLG-LGFNELIQYSLIKQESYL-----NNEINLLNPLGKDYSHLRLSL 454 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE--GQKYMAAGIRKGSSGIEGSGRLWS 606 LP LL+AT N+ + + FE HV+ ++ + + AGI G + WS Sbjct: 455 LPNLLQATEENLKKGNSMLEGFEYGHVFSTNSSSEITETEVLAGIFGGIKPKQN----WS 510 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW--YHPGRSG---IIKTSAE 661 + S + V + K + + F +L+ L + W Y G+ I ++E Sbjct: 511 ESSTQ----VSWLEGKG---KMEQFFKTLNILTY------WKPYQLGKEKNIFHIYCTSE 557 Query: 662 IVL------GYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I L G FG+ P + + L FE + + ++ + T V SL+P Sbjct: 558 IFLSNGQKVGIFGQISPILANQLNLPTETYLFEFQFEILKSQLQQNSLT--VYQEYSLYP 615 Query: 716 -VKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 + +DL+FIV + I + +I N ++ ++ + D ++G+S+ + S+ +Q++ Q Sbjct: 616 KIIKDLSFIVKKTISFDKIQELIYFNGSSVLQEIHLLDEYRGESIPKEHTSLCLQLIFQS 675 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +T +++ + +++ + + +K NA +R Sbjct: 676 EAETLQNEKVERVIENLKHVLKQKLNATIR 705 >gi|284517216|gb|ADB92109.1| phenylalanine tRNA synthase beta subunit [Paenibacillus popilliae] Length = 325 Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 109/331 (32%), Positives = 181/331 (54%), Gaps = 22/331 (6%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDL 58 M + WL +++D T V+ E++ +T G+E++ ++NR + + + V S E++PD Sbjct: 1 MNVSYQWLAEYIDVTGVTAEELAARMTQAGIEIDVIENRNKGVDGIVVGDVKSREKHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G + +Q+VCGA NV G A G+ +P + M + K+RG+ES GM Sbjct: 61 DKLNVCQVDAGTGELLQIVCGASNVDTGQKVPVALIGTVMP-DGMKIKKAKLRGVESQGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS KEL ++D A I+ LP VG + D L L+D ++++ LTPNRSDC+ + Sbjct: 120 ICSAKELGMNDKLLPKEMQAGILVLPESTEVGTPIMDVLGLNDYVLELDLTPNRSDCLSM 179 Query: 172 RGIALDLVAAGLGKLK------EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGV 225 G+A + A L+ E + S P + I+ + + C +A ++ V Sbjct: 180 LGVAYETSALLERPLRLPKTQVEEDASAPAADA-----IRVSISAADGCSRYAARYIRNV 234 Query: 226 RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISD-VLTVRRACSG 284 +P W++ RL A G+R I+ +VD+TNYV L+ G P H FDA ++++ ++ VR A G Sbjct: 235 TIQPSPLWLQNRLLAAGVRPINNIVDVTNYVMLEYGQPLHAFDADQVNEGMIEVRYAREG 294 Query: 285 EKILALDNQEYDLSPDNVVIASDGRIQSIAG 315 E + LD QE L P ++I + +AG Sbjct: 295 ETFVTLDGQERKLEPHMLLITDGSKPIGLAG 325 >gi|330888322|gb|EGH20983.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. mori str. 301020] Length = 383 Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 125/404 (30%), Positives = 205/404 (50%), Gaps = 31/404 (7%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 1 SRVEQMLGLVIENVEIERLLTGLGLAVTTEADGQWRVEVPSHRFDISLEVDLIEELARLY 60 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 61 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 113 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDT 580 LF G + L + NPIS DM+ MR SL PGL+KA N++R +FE + V + D Sbjct: 114 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNRQQDRVRMFESGLRFVGQLDG 173 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 + Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F Sbjct: 174 LK-QEPMLAGVVCGSRLPEG----WAQGRDA----VDFFDVKADVEAVLGFAGALGEFTF 224 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 G HPG++ I+ V G+ G HP + GL P+ FE+ L + Sbjct: 225 TPGQHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLAEVSTG--- 280 Query: 701 RTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLG 759 + K LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + Sbjct: 281 --RLPKFHELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGID 338 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 339 PHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 382 >gi|305432046|ref|ZP_07401213.1| phenylalanyl-tRNA synthetase beta subunit [Campylobacter coli JV20] gi|304445130|gb|EFM37776.1| phenylalanyl-tRNA synthetase beta subunit [Campylobacter coli JV20] Length = 773 Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 204/830 (24%), Positives = 371/830 (44%), Gaps = 105/830 (12%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTI--VKVLSVERNPD 57 M T SWL D LD D SL+ I TL SIG+EV+K+ + + VK N D Sbjct: 1 MIITKSWLNDWLDFEDKSLDDIAHTLNSIGIEVDKICTLKVPDKIVVGFVKEKVKHENSD 60 Query: 58 LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 +I ++D G ++ +Q+VCGA NV G A G+ +P N M + K+RG++S GM Sbjct: 61 -KLSICQVDVG-NEILQIVCGAQNVAQGQFVAVALKGALMP-NGMEIKEAKLRGVDSCGM 117 Query: 118 MCSEKEL---------MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 +CS EL ML DDS +EL G L+ Y +D +I+V LTPNR DC Sbjct: 118 LCSSTELGFEKINDGIMLLDDSIGKLEL------GKALNSYEIFNDGLIEVELTPNRGDC 171 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSS-ESIP-----LEIKFDLDDSSLCKGFAMCCV 222 + + GIA DL A LKE P E++ L + + + +SL A+ Sbjct: 172 LSIYGIARDLAVALNLNLKE---KPPFKEGENVLGIGRILRLSAEKELNSLYNYRAIELK 228 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 + ++ N+ + +++ G I L+ NY + G + +D + Sbjct: 229 EKIQTNLLISLRLAQIENFGKNPIENLL---NYATHSTGVLFNAYDLNSFYK-------- 277 Query: 283 SGEKILALDNQEYDLS-----PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 +N+E+ S I+ + S++GI + C +++ +++E Sbjct: 278 --------ENEEFTFSLVKETRGETKISYQDELLSVSGIYQEEKFKCKEDSKIIIIEANY 329 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVD------LQGMIPVLKHIVSLILSLCGGTASDI 391 DP+ II D++ +++ + +G P L + +LS+ + I Sbjct: 330 TDPM----------IIADAKMAYKKQDEQTIYRSFRGSEPKLNLGMDFLLSVLEKNPNLI 379 Query: 392 CIARN---ITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKF-EVSV 446 + + IT K + ++ E + + G ++ ++ L+IL++LGF +I D V Sbjct: 380 IYSSSQQIITNKELSNIAISIESINKTIGQEIDKDEVLKILKKLGFELIISADGLVNVKA 439 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV--KRVLAS 504 P R D++ AD+ EE++RI G+D I S+ L VE R S ++ V ++ + Sbjct: 440 PMHRPDIKNLADICEEVVRIIGIDNIASKGLEF--VEKNRLNSTYKNYKELVELRKKAVA 497 Query: 505 RAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E +++ ++E+ G +L+++NPI+A+++ +RT+LL LL A N + Sbjct: 498 NGYFESLHYVLDNEEELKSLGFNPIKLKLINPITAELNTLRTTLLNHLLNAASLNAKNSK 557 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 +FE+ V+ + E I SG + ++ S+K+ + V+ +D D Sbjct: 558 KIIKLFELGVVFGTNNEE-----LNHIAFVHSGYQEEPKI-SNKA--KPELVNFYDFLLD 609 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFG-LSNP 683 ++I F + ++ P I ++ +G+ G H I + L Sbjct: 610 LKNIIGDF------KLKASKHDILSPYEQADIYLK-DLKIGFAGRLHLKIENERDLLKTY 662 Query: 684 ICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-R 742 IC ++ L K K K S + RDL+ ++ + + N I+ +D Sbjct: 663 ICELDLNL------IKHHFKLAKPY--SKFPSISRDLSILIPKGFEYEKIKNCIEELDLE 714 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 +++ + D++ +L E S+ ++ + + + T + + MD+I++ Sbjct: 715 NLENFRLVDLYSDANL-ENSYSLTLKFVFRDMNKTLEEAQVAEHMDKILQ 763 >gi|327540676|gb|EGF27248.1| phenylalanyl-tRNA synthetase, beta subunit [Rhodopirellula baltica WH47] Length = 681 Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 173/673 (25%), Positives = 304/673 (45%), Gaps = 58/673 (8%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 D +ID+ +T NR DC+G G+A ++ A KLK I S ++ + + Sbjct: 41 DVVIDLEVTSNRGDCLGHIGVAREIAALTDQKLKIPTIEYQESGSAVDDSLAVANEMPEA 100 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C + ++GV+ +P W+ + LKAVG+ ++ +VD+TNYV ++ G P H FD ++ Sbjct: 101 CPRYTARVIRGVKVGDSPEWLEESLKAVGIGVVNNVVDVTNYVMMECGQPLHAFDLGKVG 160 Query: 274 D-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 D + VR E++ A+D++ YDL+ VIA ++ G++GG + + T D++ Sbjct: 161 DGKIVVRPGKEKEQLEAIDHRNYDLNDSTCVIADSSAALAVGGVMGGASSEVTEATADIV 220 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A + P+++ R+ + L + + S +RFER VD G+ + LI + GG+ + Sbjct: 221 LEAAEFVPLSVRRTARRLKLHSPSSFRFERRVDPVGIDWASRRACQLITEIAGGSVAPGV 280 Query: 393 IARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 I R+ V + + V L G+++ + +IL LG V D + PSWR Sbjct: 281 IDTTPEIPARETVLLRPKRVAALLGLEIETAELDKILRSLGCEVSAFADGLQCVPPSWRH 340 Query: 452 DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ + DL+EE+ RI+G DQI + P+P+ KR R ++ VL + + E Sbjct: 341 DLTREVDLIEEVARIHGYDQIPEDSPIPVAP-SSKRRFDTAMER---IRGVLTAAGISEA 396 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT---SLLPGLLKATGRNVDRAIADF 567 + S ++++ + EL L ++ + RT SL+P LL++ N A Sbjct: 397 MTPSVVTEKLDQMISPWT-ELPALQTRTSMLEGARTLRRSLIPSLLQSRAANWASASLVA 455 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE++HVY P G G I G D F K Sbjct: 456 DLFEIAHVY-LPAPAGSDSALLPDETYHIGLIAGE---------------DFFALKG--- 496 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPG---RSGIIKTSA-EIVLGYFGEFHPNILDFFG--- 679 ++++L G P G R G K A E+ L P L F G Sbjct: 497 -------TIETLCDRLGIPGELTVGPVQRDGFAKGGAVELTLVGDDAKEPLRLGFLGFVD 549 Query: 680 --------LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 L+ + E+ D + ++Q + ++ V SS ++RDL ++ + + Sbjct: 550 DKLVKQWKLTGRVVAAELSADVL-VNQSRLVPQQQAV--SSFPSIQRDLNLVLPESVRWN 606 Query: 732 TLVNII-KNVDRLIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L ++ K + D+T + ++ + + G KK V + +Q +T D +++ Sbjct: 607 ELAGLVRKAAKERLADLTYRETYRNEKVDGPNKKRVLFSMELQSQTETLSGGDADSIINE 666 Query: 790 IVENVVKKTNAVL 802 +V + K+ AVL Sbjct: 667 LVASCEKQLEAVL 679 >gi|32474644|ref|NP_867638.1| phenylalanyl-tRNA synthetase beta chain [Rhodopirellula baltica SH 1] gi|81660622|sp|Q7UP77|SYFB_RHOBA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|32445183|emb|CAD75185.1| phenylalanyl-tRNA synthetase beta chain [Rhodopirellula baltica SH 1] Length = 681 Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 171/673 (25%), Positives = 307/673 (45%), Gaps = 58/673 (8%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 D +ID+ +T NR DC+G G+A ++ A KLK I S ++ + + Sbjct: 41 DVVIDLEVTSNRGDCLGHIGVAREIAALTDQKLKIPTIEYQESGSAVDDSLAVTNEMPEA 100 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 C + ++GV+ +P W+++ LKAVG+ ++ +VD+TNYV ++ G P H FD +++ Sbjct: 101 CPRYTARVIRGVKVGDSPEWLQESLKAVGIGVVNNVVDVTNYVMMECGQPLHAFDLAKVG 160 Query: 274 D-VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVL 332 + + VR E++ A+D++ YDL+ VIA ++ G++GG + + T D++ Sbjct: 161 EGKIVVRPGKEKEQLEAIDHRNYDLNDSTCVIADSSAALAVGGVMGGASSEVTEATADIV 220 Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 +E A + P+++ R+ + L + + S +RFER VD G+ + LI + GG+ + Sbjct: 221 LEAAEFVPLSVRRTARRLKLHSPSSFRFERRVDPVGIDWASRRACQLITEIAGGSVAPGV 280 Query: 393 IARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 I R+ V + + V L G+++ + +IL LG V D + PSWR Sbjct: 281 IDTAPEIPARETVLLRPKRVAALLGLEIETAELDKILRSLGCEVSAFADGLQCVPPSWRH 340 Query: 452 DVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ + DL+EE+ RI+G DQI + P+P+ KR R ++ VL + + E Sbjct: 341 DLTREVDLIEEVARIHGYDQIPEDSPIPVAP-SSKRRFDTAMER---IRGVLTAAGISEA 396 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT---SLLPGLLKATGRNVDRAIADF 567 + S ++++ + EL L ++ + RT SL+P LL++ N A Sbjct: 397 MTPSVVTEKLDQMISPWT-ELPALQTRTSMLEGARTLRRSLIPSLLQSRAANWASASLVA 455 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSG-IEGSGRLWSDKSEERCRFVDLFDAKADAL 626 +FE++HVY P G G I G D F K Sbjct: 456 DLFEIAHVY-LPAPAGSDSALLPDETYHIGLIAGE---------------DFFALKG--- 496 Query: 627 SVIEPFVSLDSLRFESGAPSWYHPG---RSGIIKTSA-EIVLGYFGEFHPNILDFFG--- 679 ++++L G P G R G K A E+ L P L F G Sbjct: 497 -------TIETLCDRLGIPGELTVGPVQRDGFAKGGAVELTLVGDDAKEPLRLGFLGFVD 549 Query: 680 --------LSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 L+ + E+ D + ++Q + ++ V SS ++RDL ++ + + Sbjct: 550 GKLVKQWKLTGRVVAAELSADVL-VNQSRLVPQQQAV--SSFPSIQRDLNLVLPESVRWN 606 Query: 732 TLVNIIKNVDR-LIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L +++ + + D+T + ++ + + G KK V + +Q +T D +++ Sbjct: 607 ELAGLVRKAAKERLADLTYRETYRNEKVDGPNKKRVLFSMELQSQTETLSGGDADSIINE 666 Query: 790 IVENVVKKTNAVL 802 +V + K+ AVL Sbjct: 667 LVASCEKQLEAVL 679 >gi|34557669|ref|NP_907484.1| phenylalanyl-tRNA synthetase subunit beta [Wolinella succinogenes DSM 1740] gi|81832885|sp|Q7M8Y8|SYFB_WOLSU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|34483386|emb|CAE10384.1| PHENYLALANINE TRNA SYNTHETASE, BETA-SUBUNIT [Wolinella succinogenes] Length = 786 Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 210/850 (24%), Positives = 365/850 (42%), Gaps = 111/850 (13%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M FT S + HL + ++I TL IGLEV+ + A + KVL E++PD Sbjct: 1 MIFTKSLINPFVHLSA-IPTQRIYKTLNDIGLEVDSFHSLRAPDRVVVGKVLECEKHPDA 59 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 D + ++D G+ + Q+VCGA NV G A G+ I + + + K+RGIES GM Sbjct: 60 DKLNVCQVDIGEERR-QIVCGAKNVAAGQWVAVALEGAKI-SDTLTIKKAKLRGIESQGM 117 Query: 118 MCSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGI 174 +CS EL + IM L + +G L +Y SD I ++ +TPNR DC+ + G+ Sbjct: 118 ICSSSELGFPKLNEGIMILDSSIGELKLGKPLHEYPLFSDDIFEIDITPNRGDCLSLYGV 177 Query: 175 ALDLVAA------------------GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 A +L AA G+G+L +++ L S + ++ + L Sbjct: 178 ARELAAAYDLDFSEYPKEQEEDNVLGIGRLLQVSHEGKLDSSLLYKTVQLNELKLPLSIA 237 Query: 217 FAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 + + +V N+++ G V I Y D P+ D + + Sbjct: 238 LTLAYNDLLGESVLQNFIQYATLVSG-------VSIKAYRH-DACLPASTSDEKPLKASI 289 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 +++ +G L++ V A + ++ +I G+ + D V++E + Sbjct: 290 MIKKDENG-----LES----------VYAGEKKLSTI-GVSQNRETMPLDAPEVVILEAS 333 Query: 337 LWDPINIARSGKNLGIITDSR--YRFERGVDLQGMIPVLKHIVSLILSLCG-----GTAS 389 P I+ + ++R YR RG + H+ S I LC G A Sbjct: 334 YTPPAIISEGVARSKVEKETRFFYRASRGSN--------PHLPSGITLLCSALHKMGGAL 385 Query: 390 DICIARNIT--YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKF-EVS 445 IT YKP I + G +VP + +L+ L F V + D F + Sbjct: 386 IYSGTHEITQNYKPATITVDLHSLSAFIGQEVPKTKVVSLLKSLKFEVDLASDDSFLAIR 445 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 P +R D+ K D+ EEI+R+ G+D I ++PL + KR + ++ R LA R Sbjct: 446 PPLFRHDIHNKQDIAEEIVRLLGIDTILAKPLYFAE---KRRTDEEYILYKH-HRSLAKR 501 Query: 506 AMMEVVNWS--FISKEQSVLFGGG----QRELEILNPISADMSNMRTSLLPGLLKATGRN 559 AM+ N + F+ ++S L G +++LNPI++++ +R +LL LL + RN Sbjct: 502 AMVAGFNETIHFVFNQKSRLKEWGYTTIDESVDLLNPITSELDTLRPTLLLSLLDSVVRN 561 Query: 560 VDRAIADFAIFEVSHVYENDTPE--GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 + + A+FE+ Y E ++A+G++K + G WS Sbjct: 562 KNLGYSQIALFEMGSTYTAARQERFSLAFVASGLKKEAIYPYPKGEKWS----------- 610 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPS---WYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 LF + SVI F E AP +HP + I E + G + HP Sbjct: 611 LFGFAEEIASVIGEF------SLEQRAPQSEKLFHPAQCAYIIQKGERI-GTIAKLHPLA 663 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 + F L E+ L+++ + + S ++RDL ++ ++ P L Sbjct: 664 QEAFDLEETFVA-EIDLEAL------KPSLIQAQSFSKFPKLQRDLTVLIGKNHPFSALR 716 Query: 735 NIIKNVDRL-IDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 IK + + I ++ D++ + + E + S+ I++LIQ T +++I + ++++ Sbjct: 717 QEIKKLGIIEIKELFPLDIYTDEKIDEEQISLTIRLLIQSDSKTLEEEEIVSITQKVLDL 776 Query: 794 VVKKTNAVLR 803 + + A LR Sbjct: 777 LNHRFGAKLR 786 >gi|262340836|ref|YP_003283691.1| phenylalanine-tRNA ligase subunit beta [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272173|gb|ACY40081.1| phenylalanine-tRNA ligase subunit beta [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 684 Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 182/697 (26%), Positives = 321/697 (46%), Gaps = 103/697 (14%) Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP------LSSESIPLEI 204 E+ D I+DV +TPNR+D + GIA DL A + +N+S P S + ++I Sbjct: 36 EVEDSILDVEVTPNRTDAMSHYGIARDLYAILKFRGYTVNLSKPTIINDNFSHHNSHIQI 95 Query: 205 KFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPS 264 + ++ C ++ + ++ +P+W+ RLK++G+ SI+ + D+ N+V + G P Sbjct: 96 L--VQENKKCIRYSGMSIYKIKIEPSPHWLVSRLKSIGINSINNITDVINFVMYELGQPI 153 Query: 265 HVFDASRIS-DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG 323 HVFD +I + ++ A + + D+ L D+++I + S++GII + Sbjct: 154 HVFDMDQIEGKKIIIKNAEKNTYLKSSDSITRKLDEDDLIICDINKPLSLSGIINSIQSD 213 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 NT ++ + A + PI I GK + T+S+Y FERG D + L+ LI ++ Sbjct: 214 IHANTKNIFLGSAYFSPIFIRSIGKKHFLKTESQYLFERGTDPNQTVYALQRTAFLIKNI 273 Query: 384 CG-GTASDIC--IARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 T S I I+Y + + +++ + G + + +IL L + E D Sbjct: 274 TKIKTYSHITDIYPSPISYSMIHLRY--QKIRNILGKKISKKKIKKILSLLEIVIHAEND 331 Query: 441 KF-EVSVPSWRQDVEEKADLVEEILRIYGV------DQIKSEPLPLTQVEDKRNLSLQQS 493 K+ V VP +R DV + DL+EEILRI G+ DQIK PLP N Sbjct: 332 KYLFVGVPPYRIDVNREIDLIEEILRINGINKIKISDQIKISPLP--------NFCY--- 380 Query: 494 RTRY-VKRVLASR----AMMEVVNWSFISKEQ-SVLFGG--GQRELEILNPISADMSNMR 545 +T Y ++++L + E+++ + ++ Q S LF + E++ILNPI+ + MR Sbjct: 381 KTEYKIQKILFEQLVCYGFQEIISSTMRNENQYSTLFNSFFNREEIKILNPINQNYKFMR 440 Query: 546 TSLLPGLLKATGRNVDRAIAD---FAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEG 600 +SLL G++ N + D FE+ +Y +N+ + Y+ I + IE Sbjct: 441 SSLLFGMIDCIEFNCKKINYDNSNIKFFEIGKIYYKQNNKFLEKTYLGIAILQ---KIEK 497 Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL----DSLRFESGAPSWYH-PGRSGI 655 +++D +PF L + + +SG ++ + + Sbjct: 498 -------------KYIDF-----------KPFFYLKGIVEQIFQKSGICNYTQIYSKHPL 533 Query: 656 IKTSAEIV-----LGYFGEFHPNILDFFGLSNPICGFEV---YLDSIPISQKKRTKTKKV 707 ++ S I+ L G+F NIL I E+ YL SI I QKK T Sbjct: 534 LENSISILYNNRNLVELGKFKNNILR----KKEIFYAEIDWEYLISI-IQQKKIT----Y 584 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVA 766 + S +RDL+ +VD+ I + +IK + +I + ++D ++ ++L + KKS Sbjct: 585 IPFSKYPTSRRDLSLLVDKTISFEKINQLIKKKESHIIRKIKIYDFYESENLPQSKKSYT 644 Query: 767 IQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 I + K+T L ++I+ N +KK L+ Sbjct: 645 ISFFFESQKET--------LTEKIINNSMKKIEFFLK 673 >gi|326330197|ref|ZP_08196508.1| phenylalanyl-tRNA synthetase, beta subunit [Nocardioidaceae bacterium Broad-1] gi|325952010|gb|EGD44039.1| phenylalanyl-tRNA synthetase, beta subunit [Nocardioidaceae bacterium Broad-1] Length = 683 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 170/672 (25%), Positives = 302/672 (44%), Gaps = 66/672 (9%) Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGF 217 SLT NR D G GIA +L A L+ PL+ + P + D +C F Sbjct: 52 SLT-NRPDLWGHYGIARELAAIYGLPLR------PLAGATYPASVDGLVGQPDPEVCTRF 104 Query: 218 AMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLT 277 A + + +R+RL +G + LVD++NYV G P+HV+DA I+ LT Sbjct: 105 AAVAF-ACGDYRTSDLIRERLTRIGESLVHPLVDLSNYVMFTTGQPTHVYDADTITGPLT 163 Query: 278 VRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVAL 337 A +++ L+ + L VI + + + AG++GG+ + ++ ++E A Sbjct: 164 AGVATEAGELMLLNKESVKLDIGFPVIRDNADVVAAAGVMGGEGSALGPHSLRFVLEAAT 223 Query: 338 WDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI 397 + P I R+ + LG+ TD+ R+E+G+D Q + L + L+ + G ++ +++ Sbjct: 224 FRPQPIRRASQRLGLRTDASARYEKGLDTQRVDQALDLFLHLLPQVAPGV--EVSGIQDV 281 Query: 398 TYKPRKIVFMNSE----VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ-- 451 +P ++ + V R+ G D+ ++ L LGF V + D+F V+VP+WR Sbjct: 282 NVEPTAQATVDIDRGFMVDRI-GEDLGDDNVHTTLRSLGFDVEQDGDRFHVTVPTWRSTG 340 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ-SRTRYVKRVLASRA-MME 509 DV + D+VEE+ RIYG D++ + T V K SL + R ++ LA RA + E Sbjct: 341 DVSMRHDIVEEVARIYGYDRLA---IADTSVALKPVRSLHRRGLDRELREQLALRAGLQE 397 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISA-DMSNMRTSLLPGLLKATGRNVDRAIADFA 568 V+ + + + G + + + + +A D ++R SLLP LL+A N+ R Sbjct: 398 VITYPWAADHLLAATGHDKTDTVLFDGATAPDRDSLRPSLLPNLLEAVAANL-RYEEIVE 456 Query: 569 IFEVSHVYENDT-----------PEGQKYMAAGIRKGSSGIEGSGRLWS--DKSEERCRF 615 +FEV V+ + PE Q+ M + G G+ RL + RC Sbjct: 457 VFEVGAVFSATSWAPYQGAYETMPE-QRQMLGVVLAGDDGVALFRRLKGIVESVRRRCHV 515 Query: 616 VDL-FDAKADALSVIEPFVSLDSLRFESGAPSWYHP-GRSGIIKTSAEIVLGYFGEFHPN 673 VDL FD ADA+ W P R GI + + +G P Sbjct: 516 VDLSFDGDADAI--------------------WADPSARLGI--RAGDHTVGTLALLTPR 553 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL 733 + G+ + +D P+ Q R++ + + L DL+ + + + Sbjct: 554 LRRQAGIDEVQVAY-AEIDLGPL-QAHRSRENRYEPVPELPATGFDLSVVAADDVAWAQV 611 Query: 734 VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 + +VD LI +V ++G + EG +S+ ++V++QP + T + + + ++ Sbjct: 612 EAVTASVDDLISEVGYVGEYRGVWVPEGHRSLTLRVVLQPFETTLTAEQVGAVRTTVLAA 671 Query: 794 VVKKTNAVLRSS 805 + + +A R++ Sbjct: 672 LESELDARPRTA 683 >gi|301633507|gb|ADK87061.1| phenylalanine--tRNA ligase, beta subunit [Mycoplasma pneumoniae FH] Length = 805 Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 200/781 (25%), Positives = 346/781 (44%), Gaps = 82/781 (10%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP-DLDCAILRIDTGKHQE 72 T VS +IC+ L IG+EVE + + + + +V +P D + ++ K+++ Sbjct: 16 THVSNNEICEKLQQIGIEVEAIRAFKNPDYLQLGILRAVTPHPHDNHLYVCQVQIDKNKQ 75 Query: 73 IQVVCGAPNV----RVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS-------E 121 + VV GA N+ + + A G+ + N +I+ + I+GI S GM+CS Sbjct: 76 LNVVTGAVNIVDPNNLNKHVIVAKKGAELL-NGLIIKTKNIKGIISDGMLCSYVDINPFS 134 Query: 122 KELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 K L+ DD+ +I+ I+ G +L L D + +V+L NRSD + +A +L A Sbjct: 135 KHLIADGDDTHAIVLDNINRDEFGDYLSFLNLDDVVFEVTLPTNRSDLQSLIFLAKEL-A 193 Query: 181 AGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A L + L++ PL +L + + F ++ V +P + Sbjct: 194 AVLKRPIFLEQKTTMTLREFYRFPL----NLRNRAQANFFGGLFLRDVAITSSPWTTKGL 249 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L LR ++ VD N V++ G P H DA +I + ++ A E +LALDN+EY++ Sbjct: 250 LINQELRPVNCFVDQANMVTVYTGQPIHCHDADKIHGSVELKLATQLETMLALDNKEYEI 309 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P ++V+A + +I GIIG K D+ T ++ EV ++ I ++ + LG+ + Sbjct: 310 KPGDLVVADEQGTIAIVGIIGSKRTMVDNTTNNIFFEVVNYNHERIKQTAQRLGVANFAS 369 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSG 416 + + LQ L ++ + L+ G S RKI ++++ L G Sbjct: 370 RLMSKPISLQATENCLNYLQNNFLNPESIGKISKFSSTIKAPAFNRKIYLNFNQLRELIG 429 Query: 417 IDVPIEDSLRI---LERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + + I L LGF + + + P++RQD+ D+ EE+L+I +++IK Sbjct: 430 VTKKQLNDYMIRNYLTSLGFKMENQIAR----APAYRQDITVWQDISEELLKILDLNKIK 485 Query: 474 S-EPLPLTQVEDKRNL----SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--G 526 E L T++E L +LQ+ RT+ L + V+ + IS E++ F G Sbjct: 486 EDEILSTTKLEKHEKLNAYDALQKLRTK-----LQTLGFHNVITYQLISPERARNFNLFG 540 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 EI NP+S + S +R L+ LL+ +N IFE S V D+ Q + Sbjct: 541 LSNLWEIKNPLSNERSVLRVGLIDSLLRVIQKNAAYKNKLGNIFEFSFVKTKDS--NQLH 598 Query: 587 MAAGIRKGSSGIEGSGRLWSDK------SEERCRFVDLFDAKADALSVIEPF-VSLDSLR 639 +AA LW +K +++ VD+ K A +I F + D Sbjct: 599 IAA--------------LWLEKMFGSTYQKDQGVSVDIPAMKGLAQLIISNFGFNCD--- 641 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSI--PI 696 FE Y G+ +GY G +L + L P+ G E+ LD + + Sbjct: 642 FEPITEGEYFTKNVGLKLVVFNEQIGYVGLIKDELLAPYDLKGRPVYGLEINLDRLLNSL 701 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIV---DQHIPAGTLVNIIKNVDRLI--DDVTVFD 751 ++ +R+ T +S L V +D+ F + H T V IK + + + ++VFD Sbjct: 702 NRLERSYTP----ISKLQDVFKDITFSFPRDESHFE--TFVKAIKKLQTIFKWELISVFD 755 Query: 752 V 752 Sbjct: 756 T 756 >gi|121534241|ref|ZP_01666066.1| ferredoxin-fold anticodon-binding [Thermosinus carboxydivorans Nor1] gi|121307344|gb|EAX48261.1| ferredoxin-fold anticodon-binding [Thermosinus carboxydivorans Nor1] Length = 484 Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 142/491 (28%), Positives = 229/491 (46%), Gaps = 29/491 (5%) Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 ++T VL+E A ++ NI R+ + LG+ +++ RFERGVD+ ++ L L+ + Sbjct: 9 ESTKTVLLEAAAFNGANIRRTSRVLGLRSEASGRFERGVDVANIVRALDRAAKLLEDMGA 68 Query: 386 GTASDICIARNITYK-PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEV 444 T + + T PR+I F +V G +VP + IL RL F V +K V Sbjct: 69 CTVCPGIVDQYPTVVLPRQISFTAKQVNSFLGTEVPQATMVDILRRLEFDVDVHGEKITV 128 Query: 445 SVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +VP+WR DV AD+ EE+ RI+G D+I S P + SLQ R + +LA Sbjct: 129 TVPTWRADVVGPADICEEVARIFGYDKIPST-TPSGDIVYGGQSSLQNVIDR-TRTILAG 186 Query: 505 RAMMEVVNWSF-----ISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 E +++SF + K + + +LNPI+ D +RT+LL GL++ RN Sbjct: 187 IGFTETISYSFTHPAVLDKLNVPPDSSLRTAIPLLNPITDDFPLLRTTLLGGLMETIVRN 246 Query: 560 VDRAIADFAIFEVSHVYE------NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 + R D +FEV VY D P+ + M G+ G W+ E Sbjct: 247 LSRKNEDMKLFEVGAVYRPEQLPLKDFPQ-EPLMVCGVLTGRR----HEVAWNQAKE--- 298 Query: 614 RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 FVD +DAK A+ + + + + E G HPG++ + + L GE HP Sbjct: 299 -FVDFYDAKG-AVETLLTSIGISGYKVEQGTHYALHPGKTAVFVKDGD-RLAVVGEAHPR 355 Query: 674 ILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL 733 +LD FGL+ P+ FE+ + I K L + RDLA ++ I + Sbjct: 356 VLDAFGLNRPVYLFEITAE---ILLKHAVPIPAYQPLPRFPAIVRDLAVVLASDISVDRV 412 Query: 734 VNII-KNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 I ++ L+ DV +FDV+ G+ + +G +S+A + + T D ++ + IV Sbjct: 413 TRAIWESGGPLLADVKLFDVYTGEQVPKGSRSLAFSLTFRAGDRTLTDSEVEVYYKEIVL 472 Query: 793 NVVKKTNAVLR 803 + + +A LR Sbjct: 473 YLERTLDAKLR 483 >gi|13507845|ref|NP_109794.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma pneumoniae M129] gi|2500987|sp|P75563|SYFB_MYCPN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1673698|gb|AAB95696.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma pneumoniae M129] Length = 805 Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 200/781 (25%), Positives = 347/781 (44%), Gaps = 82/781 (10%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP-DLDCAILRIDTGKHQE 72 T VS +IC+ L IG+EVE + + + + +V +P D + ++ K+++ Sbjct: 16 THVSNNEICEKLQQIGIEVEAIRAFKNPDYLQLGILRAVTPHPHDNHLYVCQVQIDKNKQ 75 Query: 73 IQVVCGAPNV----RVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS-------E 121 + VV GA N+ + + A G+ + N +I+ + I+GI S GM+CS Sbjct: 76 LNVVTGAVNIVDPNNLNKHVIVAKKGAELL-NGLIIKTKNIKGIISDGMLCSYVDINPFS 134 Query: 122 KELML-SDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 K L+ DD+ +I+ I+ G +L L D + +V+L NRSD + +A +L A Sbjct: 135 KHLIADGDDTHAIVLDNINRDEFGDYLSFLNLDDVVFEVTLPTNRSDLQSLIFLAKEL-A 193 Query: 181 AGLGK---LKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A L + L++ PL +L + + F ++ V +P + Sbjct: 194 AVLKRPVFLEQKTTMTLREFYRFPL----NLRNRAQANFFGGLFLRDVAITSSPWTTKGL 249 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L LR ++ VD N V++ G P H DA +I + ++ A E +LALDN+EY++ Sbjct: 250 LINQELRPVNCFVDQANMVTVYTGQPIHCHDADKIHGSVELKLATQLETMLALDNKEYEI 309 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P ++V+A + +I GIIG K D+ T ++ EV ++ I ++ + LG+ + Sbjct: 310 KPGDLVVADEQGTIAIVGIIGSKRTMVDNTTNNIFFEVVNYNHERIKQTAQRLGVANFAS 369 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSG 416 + + LQ L ++ + L+ G S RKI ++++ L G Sbjct: 370 RLMSKPISLQATENCLNYLQNNFLNPESIGKISKFSSTIKAPAFNRKIYLNFNQLRELIG 429 Query: 417 I-DVPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + + D + L LGF + + + P++RQD+ D+ EE+L+I +++IK Sbjct: 430 VTKKQLNDHMIRNYLTSLGFKMENQIAR----APAYRQDITVWQDISEELLKILDLNKIK 485 Query: 474 S-EPLPLTQVEDKRNL----SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--G 526 E L T++E L +LQ+ RT+ L + V+ + IS E++ F G Sbjct: 486 EDEILSSTKLEKHEKLNAYDALQKLRTK-----LQTLGFHNVITYQLISPERARNFNLFG 540 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 EI NP+S + S +R L+ LL+ +N IFE S V D+ Q + Sbjct: 541 LSNLWEIKNPLSNERSVLRVGLIDSLLRVIQKNAAYKNKLGNIFEFSFVKTKDS--NQLH 598 Query: 587 MAAGIRKGSSGIEGSGRLWSDK------SEERCRFVDLFDAKADALSVIEPF-VSLDSLR 639 +AA LW +K +++ VD+ K A +I F + D Sbjct: 599 IAA--------------LWLEKMFGSTYQKDQGVSVDIPAMKGLAQLIISNFGFNCD--- 641 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS-NPICGFEVYLDSI--PI 696 FE Y G+ +GY G +L + L P+ G E+ LD + + Sbjct: 642 FEPITEGEYFTKNVGLKLVVFNEQIGYVGLIKDELLAPYDLKGRPVYGLEINLDRLLNSL 701 Query: 697 SQKKRTKTKKVVHLSSLHPVKRDLAFIV---DQHIPAGTLVNIIKNVDRLI--DDVTVFD 751 ++ +R+ T +S L V +D+ F + H T V IK + + + ++VFD Sbjct: 702 NRLERSYTP----ISKLQDVFKDITFSFPRDESHFE--TFVKAIKKLQTIFKWELISVFD 755 Query: 752 V 752 Sbjct: 756 T 756 >gi|225550760|ref|ZP_03771709.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225379914|gb|EEH02276.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 772 Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 176/733 (24%), Positives = 325/733 (44%), Gaps = 76/733 (10%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEI-Q 74 +SL ++C L +G EVE ++ + + KVL ++P+ + L + +QE+ + Sbjct: 18 ISLNELCTALMDLGCEVETINTIKPSTNLVFAKVLEKTKHPNANHLNL-VKVKANQEVYE 76 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLS 127 +VCGA N V V A + + N + + R++RG S GM+C+ E+ + Sbjct: 77 IVCGADNFNVNNWVVLAKINAELA-NGLKITPRELRGYVSNGMLCAYSEINPEVAHFLGQ 135 Query: 128 DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKL 186 D I+ L + L D I+D+S+ NR+D G +A +L A L + Sbjct: 136 TDLDGILVLHDSYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWMAKELCAYFDLEYV 195 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 + I+ E + + I L D + M VK ++N + L ++ + Sbjct: 196 IDATINHRSHKEIVNVRI---LSDD--VNSYGMIEVKNIQNYTLKWNTKSVLVNNQIKIV 250 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 + D N+++L P H FDA +IS + V+ A +L LD +EY + +++I Sbjct: 251 NNFADNMNFLTLLTANPLHAFDAHKISGQIIVKNAEEDSILLGLDQKEYAIKKGDLIIVD 310 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 D +I ++AGIIG + D+NTT +E A ++P+ IA + + L I T + RF + + Sbjct: 311 DQKILALAGIIGSNDSKIDNNTTTAYIECANFNPLLIANTARRLKINTTAAMRFSKPL-- 368 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDS 424 V K + +L+ A IC +++ + KI +V G + ++ + Sbjct: 369 --TNYVTKATLKKLLAHFKLDAKLICYFKHLVHNVIKNKI----DQVSDFVGTKINLDTA 422 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 L+RLG+ + +K + PS R DV + D+ E+I++ + + QIK +P+ + Sbjct: 423 HTFLKRLGYKI----NKTNLITPSHRYDVLNEFDVYEDIMKKFSIQQIKPQPISFDILSF 478 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMS 542 K N++ + V L + + E ++ S+ Q+ F Q+ EI NPIS S Sbjct: 479 KNNIAYDFEKK--VSDFLVDQGLFECKTYNLKSQTQAYEFDFFNFQQAYEINNPISNIRS 536 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +++ + L LL+ N ++ IFE+S + N Q+ + + + Sbjct: 537 HLKLNNLNSLLEVLEYNQNQKNELENIFEISKI--NPINSNQQTILSIV----------- 583 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------------FESG--APSWY 648 C+ L +AK + V+ FV+ +L +++ Y Sbjct: 584 ---------LCK--PLINAKLNDSIVVNNFVTTKALLHALLTKLNISYVYDTNHIVNELY 632 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 + ++ + + V G+ G+ I +GL+N I + L S ++ T KV+ Sbjct: 633 ENNQLALVNENKQ-VFGFIGQLKNQIKKTYGLNNDIFVLNLNLTSYLNQEQAIT---KVI 688 Query: 709 HLSSLHPVKRDLA 721 S H + RD++ Sbjct: 689 KPSVYHDIVRDVS 701 >gi|121534242|ref|ZP_01666067.1| B3/4 domain protein [Thermosinus carboxydivorans Nor1] gi|121307345|gb|EAX48262.1| B3/4 domain protein [Thermosinus carboxydivorans Nor1] Length = 341 Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 107/330 (32%), Positives = 184/330 (55%), Gaps = 14/330 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M+ ++ WLKD++ S E + + LT G+ V V+ + + K+ + ++P D Sbjct: 1 MRASIKWLKDYVAFTDSPEVLAEKLTMAGIPVACVEYLGKNIERVITGKIKEICKHPAAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ R++TG+ +E+ +V GA NV+ G + A G+ +P N + RGIES GM+ Sbjct: 61 RLSVCRVNTGR-EELTIVTGATNVQEGQIVPVALVGAKLP-NGQEIGHAVFRGIESHGML 118 Query: 119 CSEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 CS +EL L + S I LP D P+G + + L L D +++ LT NR+DC V Sbjct: 119 CSAEELKLDSKTISPELRDGIYILPPDTPIGIDIKEALGLDDVVLEFELTANRADCFSVL 178 Query: 173 GIALDLVAAGLGKLKE--INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVA 230 G+A ++ G L++ +N+ ++ L I +D+ +LC FA ++ V+ + Sbjct: 179 GLAREIAVLTGGVLRKPMLNLRETGGEKATSL-IDIAIDEPALCSRFAARVLRNVKVGPS 237 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILA 289 P W++ RL+A G+R I+ +VD+TN+V L+ G P H +D ++ + VRRA GE++ Sbjct: 238 PLWLQHRLQAAGMRPINNVVDVTNFVMLEMGQPMHAYDYDLLARHQIIVRRAYPGERLTT 297 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 LD + +L+PD +V+A + IAG++GG Sbjct: 298 LDGVKRELTPDMLVVADAVQAVGIAGVMGG 327 >gi|209554347|ref|YP_002284892.1| phenylalanyl-tRNA synthetase subunit beta [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|209541848|gb|ACI60077.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 10 str. ATCC 33699] Length = 772 Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 176/733 (24%), Positives = 326/733 (44%), Gaps = 76/733 (10%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEI-Q 74 +SL ++C L +G EVE ++ + + KVL ++P+ + L + +QE+ + Sbjct: 18 ISLNELCTALMDLGCEVETINTIKPSTNLVFAKVLEKTKHPNANHLNL-VKVKANQEVYE 76 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLS 127 +VCGA N V V A + + N + + R++RG S GM+C+ E+ + Sbjct: 77 IVCGADNFNVNNWVVLAKINAELA-NGLKITPRELRGYVSNGMLCAYSEINPEVAHFLGQ 135 Query: 128 DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKL 186 D I+ L + L D I+D+S+ NR+D G +A +L A L + Sbjct: 136 TDLDGILVLHDSYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWMAKELCAYFDLEYV 195 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 + I+ E + + I L D + M VK ++N + L ++ + Sbjct: 196 IDATINHRSHKEIVNVRI---LSDD--VNSYGMIEVKNIQNYTLKWNTKSVLVNNQIKIV 250 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 + D N+++L P H FDA +IS + V+ A +L LD +EY + +++I Sbjct: 251 NNFADNMNFLTLLTANPLHAFDAHKISGQIIVKNAEEDSILLGLDQKEYAIKKGDLIIVD 310 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 D +I ++AGIIG + D+NTT +E A ++P+ IA + + L I T + RF + + Sbjct: 311 DQKILALAGIIGSNDSKIDNNTTTAYIECANFNPLLIANTARRLKINTTAAMRFSKPL-- 368 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDS 424 V K + +L+ A IC +++ + KI +V G + ++ + Sbjct: 369 --TNYVTKATLKKLLAHFKLDAKLICYFKHLVHNVIKNKI----DQVSDFVGTKINLDTA 422 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 L+RLG+ + +K + PS R DV + D+ E+I++ + + QIK +P+ + Sbjct: 423 HTFLKRLGYKI----NKTNLITPSHRYDVLNEFDVYEDIMKKFSIQQIKPQPINFDILSF 478 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS--VLFGGGQRELEILNPISADMS 542 K N++ + V L + + E ++ S+ Q+ + F Q+ EI NPIS S Sbjct: 479 KNNIAYDFEKK--VSDFLVDQGLFECKTYNLKSQTQAYEIDFFNFQQAYEINNPISNIRS 536 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +++ + L LL+ N ++ IFE+S + N Q+ + + + Sbjct: 537 HLKLNNLNSLLEVLEYNQNQKNELENIFEISKI--NPINSNQQTILSIV----------- 583 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------------FESG--APSWY 648 C+ L +AK + V+ FV+ +L +++ Y Sbjct: 584 ---------LCK--PLINAKLNDSIVVNNFVTTKALLHVLLTKLNISYVYDTNHIVNELY 632 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 + ++ + + V G+ G+ I +GL+N I + L S ++ T KV+ Sbjct: 633 ENNQLALVNENKQ-VFGFIGQLKNQIKKTYGLNNDIFVINLNLTSYLNQEQAIT---KVI 688 Query: 709 HLSSLHPVKRDLA 721 S H + RD++ Sbjct: 689 KPSVYHDIVRDVS 701 >gi|171920948|ref|ZP_02932090.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] gi|171903185|gb|EDT49474.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 13 str. ATCC 33698] Length = 772 Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 176/733 (24%), Positives = 325/733 (44%), Gaps = 76/733 (10%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEI-Q 74 +SL ++C L +G EVE ++ + + KVL ++P+ + L + +QE+ + Sbjct: 18 ISLNELCTALMDLGCEVETINTIKPSTNLVFAKVLEKTKHPNANHLNL-VKVKANQEVYE 76 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLS 127 +VCGA N V V A + + N + + R++RG S GM+C+ E+ + Sbjct: 77 IVCGADNFNVNNWVVLAKINAELA-NGLKITPRELRGYVSNGMLCAYSEINPEVAHFLGQ 135 Query: 128 DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKL 186 D I+ L + L D I+D+S+ NR+D G +A +L A L + Sbjct: 136 TDLDGILVLHDSYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWMAKELCAYFDLEYV 195 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 + I+ E + + I L D + M VK ++N + L ++ + Sbjct: 196 IDATINHRSHKEIVNVRI---LSDD--VNSYGMIEVKNIQNYTLKWNTKSVLVNNQIKIV 250 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 + D N+++L P H FDA +IS + V+ A +L LD +EY + +++I Sbjct: 251 NNFADNMNFLTLLTANPLHAFDAHKISGQIIVKNAEEDSILLGLDQKEYAIKKGDLIIVD 310 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 D +I ++AGIIG + D+NTT +E A ++P+ IA + + L I T + RF + + Sbjct: 311 DQKILALAGIIGSNDSKIDNNTTTAYIECANFNPLLIANTARRLKINTTAAMRFSKPL-- 368 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDS 424 V K + +L+ A IC +++ + KI +V G + ++ + Sbjct: 369 --TNYVTKATLKKLLAHFKLDAKLICYFKHLVHNVIKNKI----DQVSDFVGTKINLDTA 422 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 L+RLG+ + +K + PS R DV + D+ E+I++ + + QIK +P+ + Sbjct: 423 HTFLKRLGYKI----NKTNLITPSHRYDVLNEFDVYEDIMKKFSIQQIKPQPINFDILSF 478 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMS 542 K N++ + V L + + E ++ S+ Q+ F Q+ EI NPIS S Sbjct: 479 KNNIAYDFEKK--VSDFLVDQGLFECKTYNLKSQTQAYEFDFFNFQQAYEINNPISNIRS 536 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +++ + L LL+ N ++ IFE+S + N Q+ + + + Sbjct: 537 HLKLNNLNSLLEVLEYNQNQKNELENIFEISKI--NPINSNQQTILSIV----------- 583 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------------FESG--APSWY 648 C+ L +AK + V+ FV+ +L +++ Y Sbjct: 584 ---------LCK--PLINAKLNDSIVVNNFVTTKALLHVLLTKLNISYVYDTNHIVNELY 632 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 + ++ + + V G+ G+ I +GL+N I + L S ++ T KV+ Sbjct: 633 ENNQLALVNENKQ-VFGFIGQLKNQIKKTYGLNNDIFVINLNLTSYLNQEQAIT---KVI 688 Query: 709 HLSSLHPVKRDLA 721 S H + RD++ Sbjct: 689 KPSVYHDIVRDVS 701 >gi|188024014|ref|ZP_02996774.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188019041|gb|EDU57081.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 7 str. ATCC 27819] Length = 772 Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 176/733 (24%), Positives = 325/733 (44%), Gaps = 76/733 (10%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEI-Q 74 +SL ++C L +G EVE ++ + + KVL ++P+ + L + +QE+ + Sbjct: 18 ISLNELCTALMDLGCEVETINTIKPSTNLVFAKVLEKTKHPNANHLNL-VKVKANQEVYE 76 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLS 127 +VCGA N V V A + + N + + R++RG S GM+C+ E+ + Sbjct: 77 IVCGADNFNVNNWVVLAKINAELA-NGLKITPRELRGYVSNGMLCAYSEINPEVAHFLGQ 135 Query: 128 DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKL 186 D I+ L + L D I+D+S+ NR+D G +A +L A L + Sbjct: 136 TDLDGILVLHDSYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWMAKELCAYFDLEYV 195 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 + I+ E + + I L D + M VK ++N + L ++ + Sbjct: 196 IDATINHRSHKEIVNVRI---LSDD--VNSYGMIEVKNIQNYTLKWNTKSVLVNNQIKIV 250 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 + D N+++L P H FDA +IS + V+ A +L LD +EY + +++I Sbjct: 251 NNFADNMNFLTLLTANPLHAFDAHKISGQIIVKNAEEDSILLGLDQKEYAIKKGDLIIVD 310 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 D +I ++AGIIG + D+NTT +E A ++P+ IA + + L I T + RF + + Sbjct: 311 DQKILALAGIIGSNDSKIDNNTTTAYIECANFNPLLIANTARRLKINTTAAMRFSKPL-- 368 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDS 424 V K + +L+ A IC +++ + KI +V G + ++ + Sbjct: 369 --TNYVTKATLKKLLAHFKLDAKLICYFKHLVHNVIKNKI----DQVSDFVGTKINLDTA 422 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 L+RLG+ + +K + PS R DV + D+ E+I++ + + QIK +P+ + Sbjct: 423 HTFLKRLGYKI----NKTNLITPSHRYDVLNEFDVYEDIMKKFSIQQIKPQPINFDILSF 478 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMS 542 K N++ + V L + + E ++ S+ Q+ F Q+ EI NPIS S Sbjct: 479 KNNIAYDFEKK--VSDFLVDQGLFECKTYNLKSQTQAYEFDFFNFQQAYEINNPISNIRS 536 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +++ + L LL+ N ++ IFE+S + N Q+ + + + Sbjct: 537 HLKLNNLNSLLEVLEYNQNQKNELENIFEISKI--NPINSNQQTILSIV----------- 583 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------------FESG--APSWY 648 C+ L +AK + V+ FV+ +L +++ Y Sbjct: 584 ---------LCK--PLINAKLNDSIVVNNFVTTKALLHVLLTKLNISYVYDTNHIVNELY 632 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 + ++ + + V G+ G+ I +GL+N I + L S ++ T KV+ Sbjct: 633 ENNQLALVNENKQ-VFGFIGQLKNQIKKTYGLNNDIFVINLNLTSYLNQEQAIT---KVI 688 Query: 709 HLSSLHPVKRDLA 721 S H + RD++ Sbjct: 689 KPSVYHDIVRDVS 701 >gi|185178937|ref|ZP_02964698.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188518285|ref|ZP_03003808.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524351|ref|ZP_03004383.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867823|ref|ZP_03079823.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273798|ref|ZP_03206332.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225551261|ref|ZP_03772207.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209201|gb|EDU06244.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188998003|gb|EDU67100.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660078|gb|EDX53458.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660520|gb|EDX53777.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198249553|gb|EDY74335.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|225379076|gb|EEH01441.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma urealyticum serovar 8 str. ATCC 27618] Length = 772 Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 176/733 (24%), Positives = 325/733 (44%), Gaps = 76/733 (10%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEI-Q 74 +SL ++C L +G EVE ++ + + KVL ++P+ + L + +QE+ + Sbjct: 18 ISLNELCTALMDLGCEVETINTIKPSTNLVFAKVLEKTKHPNANHLNL-VKVKANQEVYE 76 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLS 127 +VCGA N V V A + + N + + R++RG S GM+C+ E+ + Sbjct: 77 IVCGADNFNVNNWVVLAKINAELA-NGLKITPRELRGYVSNGMLCAYSEINPEVAHFLGQ 135 Query: 128 DDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKL 186 D I+ L + L D I+D+S+ NR+D G +A +L A L + Sbjct: 136 TDLDGILVLHDSYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWMAKELCAYFDLEYV 195 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 + I+ E + + I L D + M VK ++N + L ++ + Sbjct: 196 IDATINHRSHKEIVNVRI---LSDD--VNSYGMIEVKNIQNYTLKWNTKSVLVNNQIKIV 250 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 + D N+++L P H FDA +IS + V+ A +L LD +EY + +++I Sbjct: 251 NNFADNMNFLTLLTANPLHAFDAHKISGQIIVKNAEEDSILLGLDQKEYAIKKGDLIIVD 310 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 D +I ++AGIIG + D+NTT +E A ++P+ IA + + L I T + RF + + Sbjct: 311 DQKILALAGIIGSNDSKIDNNTTTAYIECANFNPLLIANTARRLKINTTAAMRFSKPL-- 368 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDS 424 V K + +L+ A IC +++ + KI +V G + ++ + Sbjct: 369 --TNYVTKATLKKLLAHFKLDAKLICYFKHLVHNVIKNKI----DQVSDFVGTKINLDTA 422 Query: 425 LRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 L+RLG+ + +K + PS R DV + D+ E+I++ + + QIK +P+ + Sbjct: 423 HTFLKRLGYKI----NKTNLITPSHRYDVLNEFDVYEDIMKKFSIQQIKPQPINFDILSF 478 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISADMS 542 K N++ + V L + + E ++ S+ Q+ F Q+ EI NPIS S Sbjct: 479 KNNIAYDFEKK--VSDFLVDQGLFECKTYNLKSQTQAYEFDFFNFQQAYEINNPISNIRS 536 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +++ + L LL+ N ++ IFE+S + N Q+ + + + Sbjct: 537 HLKLNNLNSLLEVLEYNQNQKNELENIFEISKI--NPINSNQQTILSIV----------- 583 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------------FESG--APSWY 648 C+ L +AK + V+ FV+ +L +++ Y Sbjct: 584 ---------LCK--PLINAKLNDSIVVNNFVTTKALLHVLLTKLNISYVYDTNHIVNELY 632 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 + ++ + + V G+ G+ I +GL+N I + L S ++ T KV+ Sbjct: 633 ENNQLALVNENKQ-VFGFIGQLKNQIKKTYGLNNDIFVINLNLTSYLNQEQAIT---KVI 688 Query: 709 HLSSLHPVKRDLA 721 S H + RD++ Sbjct: 689 KPSVYHDIVRDVS 701 >gi|308401091|ref|ZP_07669407.1| putative B3/4 domain protein [Mycobacterium tuberculosis SUMu012] gi|308366146|gb|EFP54997.1| putative B3/4 domain protein [Mycobacterium tuberculosis SUMu012] Length = 644 Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 143/518 (27%), Positives = 235/518 (45%), Gaps = 65/518 (12%) Query: 327 NTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG 386 ++TDVL+E A+WDP ++R+ + L + +++ R+ER VD + L L+ + GG Sbjct: 150 DSTDVLLEAAIWDPAAVSRTQRRLHLPSEAARRYERTVDPAISVAALDRCARLLADIAGG 209 Query: 387 TASDICI-----ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK 441 S + P I R++G+ P + R L ++G V + D Sbjct: 210 EVSPTLTDWRGDPPCDDWSPPPIRMGVDVPDRIAGVAYPQGTTARRLAQIGAVVTHDGDT 269 Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 V+ PSWR D+ + ADLVEE+LR+ G++ I S L R L+ Q R R + R Sbjct: 270 LTVTPPSWRPDLRQPADLVEEVLRLEGLEVIPSV---LPPAPAGRGLTAGQQRRRTIGRS 326 Query: 502 LASRAMMEVVNWSFISKEQSVLFG-----GGQRELEILNPISADMSNMRTSLLPGLLKAT 556 LA +E++ F+ L+G + +LNP+ AD + T+LLP LL+A Sbjct: 327 LALSGYVEILPTPFLPAGVFDLWGLEADDSRRMTTRVLNPLEADRPQLATTLLPALLEAL 386 Query: 557 GRNVDRAIADFAIFEVSHVYENDT--------------------------PEGQKYMA-- 588 RNV R + D A+F ++ V + P +++A Sbjct: 387 VRNVSRGLVDVALFAIAQVVQPTEQTRGVGLIPVDRRPTDDEIAMLDASLPRQPQHVAAV 446 Query: 589 -AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPS 646 AG+R+ G G GR D F +A+ +I +D +LR P Sbjct: 447 LAGLRE-PRGPWGPGRP--------VEAADAF----EAVRIIARASRVDVTLRPAQYLP- 492 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKK 706 +HPGR + E +G+ G+ HP +++ GL C E+ LD+IP S Sbjct: 493 -WHPGRCAQVFVG-ESSVGHAGQLHPAVIERSGLPKGTCAVELNLDAIPCS-----APLP 545 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSV 765 +S V +D++ +V IPA + + ++ L++D+ +FDVF G +GE +KS+ Sbjct: 546 APRVSPYPAVFQDVSLVVAADIPAQAVADAVRAGAGDLLEDIALFDVFTGPQIGEHRKSL 605 Query: 766 AIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + T +DD D V++ ++ AVLR Sbjct: 606 TFALRFRAPDRTLTEDDASAARDAAVQSAAERVGAVLR 643 >gi|323252783|gb|EGA36620.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] Length = 432 Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 129/445 (28%), Positives = 211/445 (47%), Gaps = 35/445 (7%) Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILE 429 ++ L+L +CGG A I N P++ I S++ RL G + E IL Sbjct: 9 AIERATRLLLDICGGDAGPIIDVSNEATLPKRATITLRRSKLDRLIGHHIADEQVSDILR 68 Query: 430 RLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP---LTQVEDKR 486 RLG V D+++ P+WR D+E + DLVEE+ R+YG + I EP+ + + Sbjct: 69 RLGCEVTEGQDEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREA 128 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRT 546 +LSL++ VK +L + EV+ +SF+ + L G L + NPIS +MS MR Sbjct: 129 DLSLKR-----VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRL 183 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAGIRKGSSGIEGSG 602 SL GLL N +R IFE + DT Q M AG+ G+ E Sbjct: 184 SLWSGLLATVVYNQNRQQNRARIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEH-- 241 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 W+ E VD +D K D +V++ L ++F++ HPG+S I E Sbjct: 242 --WNLAKET----VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDER 295 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP---ISQKKRTKTKKVVHLSSLHPVKRD 719 + G+ G HP + L+ FE+ + + + Q + +S +RD Sbjct: 296 I-GFIGVVHPELERKLDLNGRTLVFELEWNKLADRIVPQAR--------EISRFPANRRD 346 Query: 720 LAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 +A +V +++PA +++ K + V +FDV++GK + EG KS+AI +++Q T Sbjct: 347 IAVVVAENVPAADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTL 406 Query: 779 RDDDIRILMDRIVENVVKKTNAVLR 803 +++I + + VE + ++ A LR Sbjct: 407 EEEEIAATVAKCVEALKERFQASLR 431 >gi|148980636|ref|ZP_01816140.1| phenylalanyl-tRNA synthetase beta subunit [Vibrionales bacterium SWAT-3] gi|145961135|gb|EDK26452.1| phenylalanyl-tRNA synthetase beta subunit [Vibrionales bacterium SWAT-3] Length = 426 Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 130/440 (29%), Positives = 211/440 (47%), Gaps = 33/440 (7%) Query: 379 LILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIEDSLRILERLG--FS 434 L++ +CGG + + + + P+ + +++ L G ++P D + IL RLG + Sbjct: 4 LLVEICGGEVAPVNGSESEADLPKANVVALRRAKLDSLLGHEIPSTDVVEILTRLGCEVT 63 Query: 435 VIGEYDK----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLS 489 V+ E + + + PSWR D+ + DL+EE+ RIYG D I ++ P ++ D + Sbjct: 64 VVEESESTDAGWTATSPSWRFDIAIEQDLIEEVGRIYGYDNIPNQAPKAALKMNDHKEAD 123 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLL 549 R V+ +L R E + +SF+ EQ L G L + PISADMS MR L+ Sbjct: 124 QPLKR---VRDLLVDRGYHEAITYSFVEPEQQKLVVPGVEPLILPFPISADMSAMRLGLI 180 Query: 550 PGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMAAGIRKGSSGIEGSGRLW 605 GLL N R + +FE + + E G Q+ M AG+ G+ G E W Sbjct: 181 QGLLNTVVHNQKRQQSRVRLFESGLRFIPEATAENGMRQEMMLAGVISGTRGEEH----W 236 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 + VD FD K D +V+E + + F++ HPG++ I + V G Sbjct: 237 DIAT----NTVDFFDLKGDLEAVLELSANEIAYSFKAAKHPALHPGQTAAIVVDGKEV-G 291 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT-KKVVHLSSLHPVKRDLAFIV 724 G HP + FGL+ FE+ +I T+ + V +S +RD+A +V Sbjct: 292 IIGTVHPELERKFGLNGRTIVFEIEWAAI------NTRVLPEAVAVSKFPANRRDIAVVV 345 Query: 725 DQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDI 783 D+ + +G +V I + +FDV+ G+ + EGKKS+AI + +Q ++ T D DI Sbjct: 346 DEAVASGDIVEACIAAGGEFLTGAKLFDVYVGQGVEEGKKSLAIALSLQSVERTLEDADI 405 Query: 784 RILMDRIVENVVKKTNAVLR 803 +D IV ++ +K A LR Sbjct: 406 AGSVDAIVASISEKFGAALR 425 >gi|237751719|ref|ZP_04582199.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter bilis ATCC 43879] gi|229373085|gb|EEO23476.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter bilis ATCC 43879] Length = 795 Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 183/821 (22%), Positives = 358/821 (43%), Gaps = 94/821 (11%) Query: 25 LTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVR 83 L+SIGLEVE+ + KVL ++P+ D ++ +D G + +Q+VCGA NV Sbjct: 26 LSSIGLEVEREYETTIPQNVVVAKVLKRTQHPNADKLSVCEVDIGT-EVLQIVCGAKNVY 84 Query: 84 VGLLGVWAPPGSCIP---ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPI-- 138 G A S +P + + I+ +IRG++S GM+CS EL L + I+EL Sbjct: 85 AGQYVALALIDSVLPFGKDGSTIITKSEIRGVDSFGMLCSSTELGLPKLNDGILELDSSI 144 Query: 139 -DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS 197 + +G L Y ++++ +TPNR DC+ V G+A D+ A + L NI + Sbjct: 145 GELVLGKELYTYSIFHQSVLELGITPNRGDCLSVLGVARDI--ASVFNLIPKNIVA--NE 200 Query: 198 ESIPLEI-KF-------DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISAL 249 SI L + +F DL S L + + ++ P + L G + Sbjct: 201 PSIALGVGRFLQVVPHGDLHSSLLYR------IIEIKEGYTPLAIALTLGLNGRYKQCPM 254 Query: 250 VDITNYVSLDRGYPSHVF--DASRISD-----VLTVRRACSGEKILALDNQEYDLSPDNV 302 + Y + G +V+ D++ +S+ L ++ +G + + + E + + Sbjct: 255 SNFAEYATYMTGVLFNVYPMDSNNVSNNGKEAKLLIKADENGLESVYAEFHENETTRHTK 314 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 + + + KH D ++E + D + IA + + + R Sbjct: 315 LTSIGATFYEVE-----KH----DYPRTFILEASFIDSVLIANNTYGMDKTKLTHEVLHR 365 Query: 363 GV-----DLQ-GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 V DL+ GM + K + SL +L G I R Y P I + G Sbjct: 366 SVRGSNPDLELGMNFMCKSLESLNSNLYSGVQE---ILR--AYPPTNIQMTFEYISDCIG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 + E+ +L+RL F + D+ F P++R D++ K D+ EE+LR+YGVD I+ Sbjct: 421 NTIEKEEIALLLKRLNFRIQATCDENFFIAQPPAFRNDIKSKQDIAEEVLRLYGVDNIQP 480 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF--ISKEQSVLFGGGQRELE 532 + + Q+ + +T+ ++ + +E V++ F K +S+ F + + Sbjct: 481 KKHIIEQIPQTTQAYITHQKTKKLRTKALAHGYIECVHYVFDDSKKLESLGFEPLNEDKK 540 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK------- 585 +LNPI +++ +R SL+P +L++ +N +FE+ +VY+ D Q Sbjct: 541 LLNPIISELDTLRPSLIPHILESLSKNKRYGYEGIRLFEIGYVYDKDRNARQNLAFAMSD 600 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL-RFESGA 644 Y+ GI +D F+ + +I F +++ +F+ Sbjct: 601 YLKTPSYPNPKGIG----------------LDFFNFAQNVSEIIGNFECINTASKFQKS- 643 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN-PICGFEVYLDSIPISQKKRTK 703 HP +S + + +++G + HPNI + + L N C + ++ ++Q++ K Sbjct: 644 -RLIHPYQSANMLQNG-VIIGVMSKLHPNIAEMYDLGNVYFCEIDF---ALLLAQQQDDK 698 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGK 762 K S KRDL ++D+++ + + ++ I ++ D++ + Sbjct: 699 LAK--EFSKYQANKRDLTLLLDKNVSFSAIKSELEKASLHDIKEILPLDIYHE---NDDN 753 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++I+ + Q + DT + ++ + +I++ + ++ +A L+ Sbjct: 754 IALSIRFIFQSMHDTLTESQMQESLQKILDILEQRFHAKLK 794 >gi|224539491|ref|ZP_03680030.1| hypothetical protein BACCELL_04396 [Bacteroides cellulosilyticus DSM 14838] gi|224518886|gb|EEF87991.1| hypothetical protein BACCELL_04396 [Bacteroides cellulosilyticus DSM 14838] Length = 482 Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 138/499 (27%), Positives = 232/499 (46%), Gaps = 38/499 (7%) Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 + T DV +E A + P + ++ + G+ TD+ +RFERG+D I LK ++ L G Sbjct: 1 ETTKDVFIESAYFHPTWVRKTARRHGLNTDASFRFERGIDPNITIYCLKLAAIMVKELAG 60 Query: 386 GTAS----DICIARNITYKPRKIVFMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGEY- 439 GT S DIC A + IV ++ E V L G +P+E I+ L + E Sbjct: 61 GTVSSEVKDICAAPAQDF----IVELSYEKVHSLVGKVIPVETIKSIVTSLEMKITNETA 116 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + ++VP +R DV+ D++E+ILRIYG + ++ + + K V Sbjct: 117 EGLTLAVPPYRVDVQRDCDVIEDILRIYGYNNVEIPSTLKSSLTTKGEHDKSNKLQNLVA 176 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGG-----GQRELEILNPISADMSNMRTSLLPGLLK 554 L E++N S ++ + G + + +LNP+S D++ MR +LL G L+ Sbjct: 177 EQLVGCGFNEILNNSLT---RAGYYEGMETYPSKNLVMLLNPLSTDLNAMRQTLLFGGLE 233 Query: 555 ATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAGIRKGSSGIEGSGRL----WS 606 + N +R AD FE + Y E PE K +AA G+ +G+ W+ Sbjct: 234 SISHNANRKNADLKFFEFGNCYYFNEEKKNPE--KSLAAYTENYHLGLWVTGKKVSNSWA 291 Query: 607 DKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 EE +++ KA ++ +++ +L + Y S ++T L Sbjct: 292 HADEESS----VYELKAYVENIFLRLGLNMRNLVVGNLTDDIYAAALS--VQTKGGKRLA 345 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 FG IL F + N + + L+ + + R+ +S VKRDLA +VD Sbjct: 346 TFGIVTKKILKAFDIDNEV--YYADLNWKELMKAIRSVKISYAEISKFPAVKRDLALLVD 403 Query: 726 QHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + + + I ++ L+ DV++FDV++GK+L GKKS A+ L+Q T D I Sbjct: 404 KKVQFAEIEKIAYETEKKLLKDVSLFDVYEGKNLEAGKKSYAVSFLLQDENQTLNDKMID 463 Query: 785 ILMDRIVENVVKKTNAVLR 803 +M ++V+N+ K +A LR Sbjct: 464 KIMSKLVKNLEDKLDAKLR 482 >gi|229895113|ref|ZP_04510289.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia pestis Pestoides A] gi|229701875|gb|EEO89898.1| Phenylalanyl-tRNA synthetase beta chain [Yersinia pestis Pestoides A] Length = 386 Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 124/396 (31%), Positives = 187/396 (47%), Gaps = 23/396 (5%) Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 L G +P E IL RLG V ++ PSWR D+ + DLVEE+ RIYG + I Sbjct: 7 LIGHHIPSEQVSDILRRLGCKVTECGSDWQAVAPSWRFDMAIEEDLVEEVARIYGYNNIP 66 Query: 474 SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 P+ V K R SL R VK L R E + +SF+ + L Q L Sbjct: 67 DVPVRADLVMTKHREASLSLKR---VKTALVDRGYQEAITYSFVDPKVQALLHPQQEALI 123 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE--VSHVYENDTPEG--QKYMA 588 + NPIS DMS MR SLL GLL A N +R + +FE + V +N G Q M Sbjct: 124 LPNPISVDMSAMRLSLLTGLLSAVVYNQNRQQSRLRLFESGLRFVPDNTADLGIRQDVML 183 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 AG+ G E W + +D +D K D +++E L ++F + A S Sbjct: 184 AGVIAGHRYDEH----WDLARQP----IDFYDLKGDLEAILELTGKLSDVQFRAEAHSAL 235 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 HPG+S I + E + G+ G HP + L+ FEV + + + + Sbjct: 236 HPGQSAAIYLAGEHI-GFIGVVHPELERKLDLNGRTVVFEVQWNKLADRAVPQAR----- 289 Query: 709 HLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAI 767 +S +RD+A +V +++PA ++ K V + V +FDV+ GK + EG KS+AI Sbjct: 290 EISRFPANRRDIAVVVAENVPAEDILAECKKVGANQVVGVNLFDVYSGKGVAEGYKSLAI 349 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +++Q T +++I + + VE + ++ A LR Sbjct: 350 SLVLQDTARTLEEEEIAATVAKCVEALKQRFQASLR 385 >gi|171920500|ref|ZP_02931792.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|171902973|gb|EDT49262.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 1 str. ATCC 27813] Length = 772 Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 179/745 (24%), Positives = 333/745 (44%), Gaps = 59/745 (7%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQV 75 + L ++C L +G EVE +++ + + KVL R+P+ + L + +V Sbjct: 18 IPLNQLCTALMDLGCEVETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEV 77 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLSD 128 VCGA N V V A + + N + + R++RG S GM+C+ E+ + S Sbjct: 78 VCGANNFSVHNWVVLAKLNAELA-NGLKITPRELRGYVSNGMLCAYSEINPQATSFLTST 136 Query: 129 DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKLK 187 D I+ L + + L D I+D+S+ NR+D G IA +L A + Sbjct: 137 DLDGILVLDDNYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWIAKELCAYFDFEYVV 196 Query: 188 EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + I+ E I + I L D + + VK ++N + + L ++ ++ Sbjct: 197 DATINHRPHKEIIDVRI---LSDD--VNSYGIIEVKNIQNYILKWNTKSILINNQIKVLN 251 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD 307 D N+++L P H FDA +IS + V+ A +L LD +EY + +++I D Sbjct: 252 NFADNMNFLTLLTANPLHAFDARKISGQIVVKNAEEDAILLGLDQKEYLIKKGDLIIVDD 311 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 +I ++AGIIG + D +T +E A ++P+ IA + + L I T + RF + Sbjct: 312 QKILALAGIIGSNDSKIDATSTTAYIECANFNPMLIANTARRLKINTAAAMRFSK----- 366 Query: 368 GMIPVLKHIVSLIL-SLCGGTASDICIARNITYKPRKI--VFMN--SEVKRLSGIDVPIE 422 P+ ++ + L L SD A+ I Y + V N ++V G ++ ++ Sbjct: 367 ---PLTNYVTKVTLKKLLANFKSD---AKLIYYFKHSVHNVIKNKINQVSDFVGAEIDLD 420 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 + L+RLG+ + +K + PS R DV + D+ E+I++ + +IK +P+ + Sbjct: 421 TAQTFLKRLGYKI----NKSNLITPSHRYDVLNEFDVYEDIMKKISIQEIKPQPISFDIL 476 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISAD 540 + NL+ + V L + + E ++ ++ Q+ F ++ EI NPIS Sbjct: 477 NFENNLAYDFEKK--VSDFLVDQGLFECKTYNLKNQTQAHEFNFFNFKQAYEINNPISNM 534 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG--SSGI 598 S+++ + L LL+ N ++ IFE+S + D+ + Q ++ + K +S I Sbjct: 535 RSHLKLNNLNSLLEVLEYNQNQKNELENIFEISKINPVDSSQ-QTVLSIILCKPLINSKI 593 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 S V+ F L + +++D ++ + + + Sbjct: 594 NDS------------LIVNNFVTTKALLHALLTKLNIDYAYDKNHVVNELYDNNQLALIN 641 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + + V G+ G+ + +GLSN I F + L+ +K+ T KV+ S H V R Sbjct: 642 ANKQVFGFIGQLKNQVKKTYGLSNDI--FIINLNLTSYLNQKQVIT-KVIKPSMYHDVIR 698 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDRL 743 D++ + + L NII N+ ++ Sbjct: 699 DISVKLASDVD---LNNIIANIKKI 720 >gi|183508653|ref|ZP_02958152.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|182676120|gb|EDT88025.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 14 str. ATCC 33697] Length = 772 Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 178/745 (23%), Positives = 333/745 (44%), Gaps = 59/745 (7%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQV 75 + L ++C L +G EVE +++ + + KVL R+P+ + L + ++ Sbjct: 18 IPLNELCAALMDLGCEVETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEI 77 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLSD 128 VCGA N V V A + + N + + R++RG S GM+C+ E+ + S Sbjct: 78 VCGANNFSVHNWVVLAKLNAELA-NGLKITPRELRGYVSNGMLCAYSEINPQATSFLTST 136 Query: 129 DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKLK 187 D I+ L + + L D I+D+S+ NR+D G IA +L A + Sbjct: 137 DLDGILVLDDNYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWIAKELCAYFDFEYVV 196 Query: 188 EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + I+ E I + I L D + + VK ++N + + L ++ ++ Sbjct: 197 DATINHRPHKEIIDVRI---LSDD--VNSYGIIEVKNIQNYILKWNTKSILINNQIKVLN 251 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD 307 D N+++L P H FDA +IS + V+ A +L LD +EY + +++I D Sbjct: 252 NFADNMNFLTLLTANPLHAFDARKISGQIVVKNAEEDAILLGLDQKEYLIKKGDLIIVDD 311 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 +I ++AGIIG + D +T +E A ++P+ IA + + L I T + RF + Sbjct: 312 QKILALAGIIGSNDSKIDATSTTAYIECANFNPMLIANTARRLKINTAAAMRFSK----- 366 Query: 368 GMIPVLKHIVSLIL-SLCGGTASDICIARNITYKPRKI--VFMN--SEVKRLSGIDVPIE 422 P+ ++ + L L SD A+ I Y + V N ++V G ++ ++ Sbjct: 367 ---PLTNYVTKVTLKKLLANFKSD---AKLIYYFKHSVHNVIKNKINQVSDFVGAEIDLD 420 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 + L+RLG+ + +K + PS R DV + D+ E+I++ + +IK +P+ + Sbjct: 421 TAQTFLKRLGYKI----NKSNLITPSHRYDVLNEFDVYEDIMKKISIQEIKPQPISFDIL 476 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISAD 540 + NL+ + V L + + E ++ ++ Q+ F ++ EI NPIS Sbjct: 477 NFENNLAYDFEKK--VSDFLVDQGLFECKTYNLKNQTQAHEFNFFNFKQAYEINNPISNM 534 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG--SSGI 598 S+++ + L LL+ N ++ IFE+S + D+ + Q ++ + K +S I Sbjct: 535 RSHLKLNNLNSLLEVLEYNQNQKNELENIFEISKINPVDSSQ-QTVLSIILCKPLINSKI 593 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 S V+ F L + +++D ++ + + + Sbjct: 594 NDS------------LIVNNFVTTKALLHALLTKLNIDYAYDKNHVVNELYDNNQLALIN 641 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + + V G+ G+ + +GLSN I F + L+ +K+ T KV+ S H V R Sbjct: 642 ANKQVFGFIGQLKNQVKKTYGLSNDI--FIINLNLTSYLNQKQVIT-KVIKPSMYHDVIR 698 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDRL 743 D++ + + L NII N+ ++ Sbjct: 699 DISVKLASDVD---LNNIIANIKKI 720 >gi|284931463|gb|ADC31401.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma gallisepticum str. F] Length = 804 Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 171/767 (22%), Positives = 344/767 (44%), Gaps = 59/767 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 T + +KI + L +IG EVE + + I K+ +++++P + I I ++ Sbjct: 16 TKIEDKKIVEALNAIGAEVESIKTFSMIDYLIIGKIFTIKKHPHAEKLNICSIQISDNKF 75 Query: 73 IQVVCGAPNV--RVGLLGVW---APPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--- 124 I V+ +PN+ + +L + A G+ +P ++N R IRG+ S+G++CS +L Sbjct: 76 INVISDSPNLFDQTKVLNKYVIVAMEGAELPNGITVIN-RDIRGMNSSGVLCSYADLNPQ 134 Query: 125 ---MLSD-DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 LS+ DS +I+ L + YL + D I D+S+ +R D G+R +A +L A Sbjct: 135 SSEYLSEYDSKNIIILDKANLGDTEVYKYLNIDDTIFDISIPSSRPDWHGIRFLAKELAA 194 Query: 181 A-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 L ++ I + I ++ + D+ + K F ++ + + + L Sbjct: 195 YLNLKYVELIGRAKQTDFHQINFKVLDETDNKA--KYFGGIHLRNYQLQQSSWNTKGILI 252 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 ++ I+ LVD++N + L P H+ DA +I + + +A E+ LALDN+ Y + Sbjct: 253 NNHIKPINDLVDLSNLIPLFVANPIHIHDADKIVGDVRLVQATKKEQFLALDNKWYTVQE 312 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +++++ D +I ++AGIIG D+N+ + +EV +D I +S I T+S Sbjct: 313 NDLLVVDDEKIIALAGIIGSMATAVDENSINYFIEVGNFDRHQIIKSAAFHKINTNSANL 372 Query: 360 FERGVDLQGMIPVLKHIVSLILS-LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI- 417 F + + L +++ +L+ + S++ ++ +++ +++ L G Sbjct: 373 FSKEISLYQTKKTFEYLYQYLLTKVYNQQLSELSKTFSVDEYHQQVKVNYDKIRSLLGSM 432 Query: 418 ----DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 D I+ SL LGF V + V VPS+R D+ DLVEE+L+I ++ + Sbjct: 433 NYLPDAKIQKSLT---NLGFLVKDDL----VYVPSYRNDIYNWQDLVEELLKILNINLFQ 485 Query: 474 SEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQ 528 P+ L +V ++ N L + + + L S + ++ SK+++ L Q Sbjct: 486 PIPIKADYLLEVNNETNELLDR-----LSKKLRSLKFNHIRTYNLTSKKRAELLNLFKYQ 540 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + NPIS R ++L LL+ N + IFE+ Q + Sbjct: 541 DPVVVSNPISETRQYYRQNILTNLLEVYELNQSYKNKLYPIFEI-----------QSLLT 589 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G+ + L++ + +DL K + +++ F + +++ Sbjct: 590 KNGANHHIGLVMANNLFNHSYDPSSGIKLDLITIKGISDIIVQNFGF--NCNYQTINDDT 647 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTKK 706 Y + + +GY G+ ++L F L++ I ++ L+ + S + +T + Sbjct: 648 YLVKNDSLKLVVYDETIGYIGKIKKSVLKEFDLADQDIYCLDINLERLITSINRYVRTYE 707 Query: 707 VVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL--IDDVTVFD 751 V RD+ F + + + +N+I + ++L + +++FD Sbjct: 708 A--YDHHQEVTRDITFQLKNEVDFNSFINVINSFNKLSKWEIISIFD 752 >gi|13358020|ref|NP_078294.1| phenylalanyl-tRNA synthetase subunit beta [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|170762356|ref|YP_001752542.1| phenylalanyl-tRNA synthetase subunit beta [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|12644587|sp|Q9PQ33|SYFB_UREPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|11357000|pir||B82888 phenylalanine-tRNA synthetase beta chain UU457 [imported] - Ureaplasma urealyticum gi|6899450|gb|AAF30869.1|AE002142_3 phenylalanine-tRNA synthetase beta chain [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827933|gb|ACA33195.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 3 str. ATCC 27815] Length = 772 Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 177/745 (23%), Positives = 332/745 (44%), Gaps = 59/745 (7%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQV 75 + L ++C L +G EVE +++ + + KVL R+P+ + L + ++ Sbjct: 18 IPLNELCAALMDLGCEVETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEI 77 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLSD 128 VCGA N V V A + + N + + R++RG S GM+C+ E+ + S Sbjct: 78 VCGANNFSVHNWVVLAKLNAELA-NGLKITPRELRGYVSNGMLCAYSEINPQATSFLTST 136 Query: 129 DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKLK 187 D I+ L + + L D I+D+S+ NR+D G IA +L A + Sbjct: 137 DLDGILVLDDNYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWIAKELCAYFDFEYVV 196 Query: 188 EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + I+ E I + I L D + + VK ++N + + L ++ ++ Sbjct: 197 DATINHRPHKEIIDVRI---LSDD--VNSYGIIEVKNIQNYILKWNTKSILINNQIKVLN 251 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD 307 D N+++L P H FDA +IS + V+ A +L LD +EY + +++I D Sbjct: 252 NFADNMNFLTLLTANPLHAFDARKISGQIVVKNAEEDAILLGLDQKEYLIKKGDLIIVDD 311 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 +I ++AGIIG + D +T +E A ++P+ IA + + L I T + RF + Sbjct: 312 QKILALAGIIGSNDSKIDATSTTAYIECANFNPMLIANTARRLKINTAAAMRFSK----- 366 Query: 368 GMIPVLKHIVSLIL-SLCGGTASDICIARNITYKPRKI--VFMN--SEVKRLSGIDVPIE 422 P+ ++ + L L SD A+ I Y + V N ++V G ++ ++ Sbjct: 367 ---PLTNYVTKVTLKKLLANFKSD---AKLIYYFKHSVHNVIKNKINQVSDFVGAEIDLD 420 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 + L+RLG+ + +K + PS R DV + D+ E+I++ + +IK +P+ + Sbjct: 421 TAQTFLKRLGYKI----NKSNLITPSHRYDVLNEFDVYEDIMKKISIQEIKPQPISFDIL 476 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISAD 540 + NL+ + V L + + E ++ ++ Q+ F ++ EI NP S Sbjct: 477 NFENNLAYDFEKK--VSDFLVDQGLFECKTYNLKNQTQAHEFNFFNFKQAYEINNPTSNM 534 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG--SSGI 598 S+++ + L LL+ N ++ IFE+S + D+ + Q ++ + K +S I Sbjct: 535 RSHLKLNNLNSLLEVLEYNQNQKNELENIFEISKINPVDSSQ-QTVLSIILCKPLINSKI 593 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 S V+ F L + +++D ++ + + + Sbjct: 594 NDS------------LIVNNFVTTKALLHALLTKLNIDYAYDKNHVVNELYDNNQLALIN 641 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + + V G+ G+ + +GLSN I F + L+ +K+ T KV+ S H V R Sbjct: 642 ANKQVFGFIGQLKNQVKKTYGLSNDI--FIINLNLTSYLNQKQVIT-KVIKPSMYHDVIR 698 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDRL 743 D++ + + L NII N+ ++ Sbjct: 699 DISVKLASDVD---LNNIIANIKKI 720 >gi|186701659|ref|ZP_02971360.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|186700903|gb|EDU19185.1| phenylalanyl-tRNA synthetase, beta subunit [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 772 Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 137/546 (25%), Positives = 251/546 (45%), Gaps = 42/546 (7%) Query: 16 VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQV 75 + L ++C L +G EVE +++ + + KVL R+P+ + L + ++ Sbjct: 18 IPLNELCAALMDLGCEVETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEI 77 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-------MLSD 128 VCGA N V V A + + N + + R++RG S GM+C+ E+ + S Sbjct: 78 VCGANNFSVHNWVVLAKLNAELA-NGLKITPRELRGYVSNGMLCAYSEINPQATSFLTST 136 Query: 129 DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA-GLGKLK 187 + I+ L + + L D I+D+S+ NR+D G IA +L A + Sbjct: 137 NLDGILVLDDNYDHYKTPNQIFNLDDVILDLSIPSNRNDLNGYFWIAKELCAYFDFEYVV 196 Query: 188 EINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSIS 247 + I+ E I + I L D + + VK ++N + + L ++ ++ Sbjct: 197 DATINHRPHKEIIDVRI---LSDD--VNSYGIIEVKNIQNYILKWNTKSILINNQIKVLN 251 Query: 248 ALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASD 307 D N+++L P H FDA +IS + V+ A +L LD +EY + +++I D Sbjct: 252 NFADNMNFLTLLTANPLHAFDARKISGQIVVKNAEEDAILLGLDQKEYLIKKGDLIIVDD 311 Query: 308 GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 +I ++AGIIG + D +T +E A ++P+ IA + + L I T + RF + Sbjct: 312 QKILALAGIIGSNDSKIDATSTTAYIECANFNPMLIANTARRLKINTAAAMRFSK----- 366 Query: 368 GMIPVLKHIVSLIL-SLCGGTASDICIARNITYKPRKI--VFMN--SEVKRLSGIDVPIE 422 P+ ++ + L L SD A+ I Y + V N ++V G ++ ++ Sbjct: 367 ---PLTNYVTKVTLKKLLANFKSD---AKLIYYFKHSVHNVIKNKINQVSDFVGAEIDLD 420 Query: 423 DSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV 482 + L+RLG+ + +K + PS R DV + D+ E+I++ + +IK +P+ + Sbjct: 421 TAQTFLKRLGYKI----NKSNLITPSHRYDVLNEFDVYEDIMKKISIQEIKPQPISFDIL 476 Query: 483 EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQRELEILNPISAD 540 + NL+ + V L + + E ++ ++ Q+ F ++ EI NPI Sbjct: 477 NFENNLAYDFEKK--VSDFLVDQGLFECKTYNLKNQTQAHEFNFFNFKQAYEINNPI--- 531 Query: 541 MSNMRT 546 SNMR+ Sbjct: 532 -SNMRS 536 >gi|294660396|ref|NP_853144.2| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma gallisepticum str. R(low)] gi|298286862|sp|Q7NBB7|SYFB_MYCGA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|284812055|gb|AAP56712.2| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma gallisepticum str. R(low)] gi|284930626|gb|ADC30565.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma gallisepticum str. R(high)] Length = 804 Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 168/764 (21%), Positives = 343/764 (44%), Gaps = 53/764 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 T + +KI + L +IG EVE + + I K+ +++++P + I I ++ Sbjct: 16 TKIEDKKIVEALNAIGAEVESIKTFSMIDYLIIGKIFTIKKHPHAEKLNICSIQISDNKF 75 Query: 73 IQVVCGAPNV--RVGLLGVW---APPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--- 124 I ++ +PN+ + +L + A G+ +P ++N R IRG+ S+G++CS +L Sbjct: 76 INIISDSPNLFDQTKVLNKYVIVAMEGAELPNGITVIN-RDIRGMNSSGLLCSYADLNPQ 134 Query: 125 ---MLSD-DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 LS+ DS +I+ L + YL + D I D+S+ +R D G+R +A +L A Sbjct: 135 SSEYLSEYDSKNIIILDKANLGDTEVYKYLNIDDTIFDISIPSSRPDWHGIRFLAKELAA 194 Query: 181 A-GLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 L ++ I + I ++ + D+ + K F ++ + + + L Sbjct: 195 YLNLKYVELIGRAKQTDFHQINFKVLDETDNKA--KYFGGIHLRNYQLQQSSWNTKGILI 252 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 ++ I+ LVD++N + L P H+ DA +I + + +A E+ LALDN+ Y + Sbjct: 253 NNHIKPINDLVDLSNLIPLFVANPIHIHDADKIVGDVRLVQATKKEQFLALDNKWYTVQE 312 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +++++ D +I ++AGIIG D+N+ + +EV +D I +S I T S Sbjct: 313 NDLLVVDDEKIIALAGIIGSMATAVDENSINYFIEVGNFDRHQIIKSAAFHKINTYSANL 372 Query: 360 FERGVDLQGMIPVLKHIVSLILS-LCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 F + + L +++ +L+ + S++ ++ +++ +++ L G Sbjct: 373 FSKEISLYQTKKTFEYLYQYLLTKVYNQQLSELSKTFSVDEYHQQVKVNYDKIRSLLGSM 432 Query: 419 VPIEDSL--RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 + D++ + L LGF V + V VPS+R D+ DLVEE+L+I ++ + P Sbjct: 433 NYLPDAMIQKSLTDLGFLVEDDL----VYVPSYRNDIYNWQDLVEELLKILNINLFQPIP 488 Query: 477 LP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG--GGQREL 531 + L +V ++ N L + + + L S + ++ SK+++ L Q + Sbjct: 489 IKADYLLEVNNETNELLDR-----LSKKLRSLKFNHIRTYNLTSKKRAELLNLFKYQDPV 543 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 + PIS R ++L LL+ N + IFE+ Q + Sbjct: 544 VVSKPISETRQYYRQNILTNLLEVYQLNRSYKNKLYPIFEI-----------QSLLTKNG 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRF-VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 G+ + L++ + +DL K + +++ F + +++ Y Sbjct: 593 ANHHIGLVMANNLFNHSYDPSSGIKLDLITIKGISDIIVQNFGF--NCNYQTINDDTYLV 650 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRTKTKKVVH 709 + + +GY G+ +IL F L++ I ++ L+ + S + +T + Sbjct: 651 KNDSLKLVVYDETIGYIGKIKKSILKEFDLADQDIYCLDINLERLITSINRYVRTYEAY- 709 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRL--IDDVTVFD 751 V RD+ F + + + +N+I + ++L + +++FD Sbjct: 710 -DHYQEVTRDITFQLKNEVDFNSFINVINSFNKLSKWEIISIFD 752 >gi|323220077|gb|EGA04544.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] Length = 401 Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 121/415 (29%), Positives = 197/415 (47%), Gaps = 33/415 (7%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 K I S++ RL G + E IL RLG V D+++ P+WR D+E + DL Sbjct: 8 KRATITLRRSKLDRLIGHHIADEQVSDILRRLGCEVTEGQDEWKAVAPTWRFDMEIEEDL 67 Query: 460 VEEILRIYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 VEE+ R+YG + I EP+ + + +LSL++ VK +L + EV+ +SF+ Sbjct: 68 VEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKR-----VKTMLNDKGYQEVITYSFV 122 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + L G L + NPIS +MS MR SL GLL N +R IFE + Sbjct: 123 DPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRARIFETGLRF 182 Query: 577 ENDTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 DT Q M AG+ G+ E W+ E VD +D K D +V++ Sbjct: 183 VPDTQANLGIRQDLMLAGVICGNRYDEH----WNLAKET----VDFYDLKGDLEAVLDLT 234 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 L ++F++ HPG+S I E + G+ G HP + L+ FE+ + Sbjct: 235 GKLGDIQFKAEMNPALHPGQSAAIYLKDERI-GFIGVVHPELERKLDLNGRTLVFELEWN 293 Query: 693 SIP---ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVT 748 + + Q + +S +RD+A +V +++PA +++ K + V Sbjct: 294 KLADRIVPQAR--------EISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVN 345 Query: 749 VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +FDV++GK + EG KS+AI +++Q T +++I + + VE + ++ A LR Sbjct: 346 LFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCVEALKERFQASLR 400 >gi|293977751|ref|YP_003543181.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Sulcia muelleri DMIN] gi|292667682|gb|ADE35317.1| phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial [Candidatus Sulcia muelleri DMIN] Length = 736 Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 166/666 (24%), Positives = 299/666 (44%), Gaps = 66/666 (9%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAA--GLGKLKEINISCPLSSESIPLEIK-FDLD- 209 D +I+++++PNR D + GIA DL A G L +I P+S K F + Sbjct: 97 DYLIELNISPNRGDVMSHYGIARDLNIALKYRGFLSQIRDLPPVSLFKKDFSFKNFKIKH 156 Query: 210 -DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 ++ C + + + +P W++Q L +G + + ++DI N++ + G P +FD Sbjct: 157 FNNKKCIRYTYTTICNINVYDSPKWLKQYLNIIGCNTRNNILDIENFIMYELGQPIKIFD 216 Query: 269 ASRISDVLTVRRACSGEKILAL-DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDN 327 +I D + + L DN++ L+ ++V+ + IAGI+ K + Sbjct: 217 LDKIIDFFFKIKFSKKKLKFKLNDNKDLFLNEKDLVLFNYKNPICIAGILVNKDFVVNKQ 276 Query: 328 TTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT 387 T ++ +E A + ++ R+ K + DS RFERG+D +I LK LI + GG Sbjct: 277 TKNIFIESAYYASESLYRTAKKYHLKNDSSIRFERGIDPNLIIYALKRAALLIKEISGGK 336 Query: 388 ASDICIARNITYKPRKI----VFMNSEVKRLS---GIDVPIEDSLRILERLGFSVIGE-Y 439 + + I P KI +F+ KRL G ++ + IL L S++ E + Sbjct: 337 IT----SNVIDIYPNKINNIEIFL--RYKRLYNIVGFNINKKKIKEILFLLEISILFENF 390 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYV 498 + ++ VP +R+D+ + D++EEILRIYG + + L Q+ N +++ + Sbjct: 391 NGLKIKVPLYRKDITREIDVIEEILRIYGYNNFCFKHEMFLKQINFNLNKNIKIENI--I 448 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGG-QRELEILNPISADMSNMRTSLLPGLLKATG 557 L S E +N S K+ F +++ ILN + D+S +R SLL G+L+ Sbjct: 449 SNQLNSHGFYETLNISLNKKKYINYFNNNLYKKINILNSYNKDLSILRFSLLFGILENIS 508 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 N++R I + +FE G+KY +K + G + S + ++ Sbjct: 509 YNLNRNINNLKLFE----------WGKKYFFY--KKNIIENKTLGIIISYEIKKNYNIFF 556 Query: 618 LFDAKADALSV------IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 F + L + + + DS+ E+G +Y K ++GY + Sbjct: 557 YFKGILEQLIIRCGIKFLNQKIYKDSI-LENGVSFYY--------KNYIFCIIGYVKK-- 605 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKT-KKVVHLSSLHPVKRDLAFIVDQHIPA 730 IL F + N I ++ D I I KK KT K + S L+ +RD++ +++ +I Sbjct: 606 -TILIEFEILNKILYADINWDIINIFFKKNDKTIYKKIDNSPLY--RRDISLLIENNISF 662 Query: 731 GTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + I ++ I + + D ++ ++L GKKS I F+D + L D Sbjct: 663 EEIKKISFSIKEKKIIKICLLDEYKSQNLPFGKKSYTISFF-------FKDKN-NNLTDA 714 Query: 790 IVENVV 795 ++EN + Sbjct: 715 LIENTI 720 Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 24/35 (68%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV 35 MK + +WLK ++ T+ ++ IC+ LT IG VEK+ Sbjct: 1 MKISYNWLKKYISTETDIKLICNILTDIGFNVEKL 35 >gi|77413166|ref|ZP_00789365.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] gi|77160784|gb|EAO71896.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae 515] Length = 465 Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 116/481 (24%), Positives = 233/481 (48%), Gaps = 28/481 (5%) Query: 333 VEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDIC 392 ++ A+++ +I ++ L + ++S RFE+G++ + + +++ GG Sbjct: 3 LKAAVFNGPSIRKTSGRLTLRSESSSRFEKGINYDTVSEAMDFAAAMLQEXAGGQVLSGQ 62 Query: 393 IARNIT-YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 + + +P ++ V G ++ D + E+LGF++ G KF V VP R Sbjct: 63 VTEGVLPTEPVEVSTTLGYVNTRLGTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRW 122 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 D+ +ADLVEEI RIYG +++ + LP S+Q+ R R V+ V + E++ Sbjct: 123 DIAIQADLVEEIARIYGYEKLPT-TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEII 180 Query: 512 NWSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 ++ + E++V F + E++ P++ D S +R +++ G+L NV R ++ A++ Sbjct: 181 TYALTTPEKAVQFSTQATNITELMWPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVY 240 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVI 629 E+ V+E T ++ + + + + G L +K + + + VD F AK ++ Sbjct: 241 EIGKVFEQ-TGNPKEDLPTEVETFTFALTG---LVEEKDFQTKAKPVDFFYAKG----IV 292 Query: 630 EPF---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 E + LD + HPGR+ I + + G+ G+ HP + + Sbjct: 293 EALFIKLKLDVTFVAQKGLASMHPGRTATILLDGKEI-GFVGQVHPQTAKQYDIP----- 346 Query: 687 FEVYLDSIPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDR 742 E Y+ I +S + + ++ ++ V RD+A ++ + + +V+ I+ V R Sbjct: 347 -ETYVAEINLSTIESQMNQALIFEDITKYPSVSRDIALLLAESVSHHDIVSAIETSGVKR 405 Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 L + +FDV+ G ++ EG KS+A + Q D D+++ M++I +++V+K NA + Sbjct: 406 LT-AIKLFDVYAGNNIAEGYKSMAYSLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEI 464 Query: 803 R 803 R Sbjct: 465 R 465 >gi|289750198|ref|ZP_06509576.1| predicted protein [Mycobacterium tuberculosis T92] gi|289690785|gb|EFD58214.1| predicted protein [Mycobacterium tuberculosis T92] Length = 326 Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 110/326 (33%), Positives = 167/326 (51%), Gaps = 28/326 (8%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 2 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 61 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 62 LTGYKKPIRACAV---DIGDWQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 117 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 118 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 177 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 178 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 232 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 233 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 292 Query: 282 CSGEKILALDNQEYDLSPDNVVIASD 307 SGE + LD E L +V+I D Sbjct: 293 RSGETAVTLDGIERKLDTADVLIVDD 318 >gi|215426969|ref|ZP_03424888.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T92] Length = 325 Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 110/326 (33%), Positives = 167/326 (51%), Gaps = 28/326 (8%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDWQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELPIDAP-VGGRLSDYLELSDPIIDVSLTPNRSDC 168 G S GM+CS EL L D + I+ LP A G + L L D + +++TP+R C Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLPPGAAEPGADGAGVLGLDDVVFHLAITPDRGYC 176 Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIP-LEIK-----FDLDDSSLCKGFAMCCV 222 + VRG+A +L A +++ P S+ +P L I+ + + + FA+ V Sbjct: 177 MSVRGLARELACA-----YDLDFVDPASNSRVPPLPIEGPAWPLTVQPETGVRRFALRPV 231 Query: 223 KGV-RNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 G+ V+P W+++RL G+R+ VD+TNYV L+ G+P H D +RIS L VR A Sbjct: 232 IGIDPAAVSPWWLQRRLLLCGIRATCPAVDVTNYVMLELGHPMHAHDRNRISGTLGVRFA 291 Query: 282 CSGEKILALDNQEYDLSPDNVVIASD 307 SGE + LD E L +V+I D Sbjct: 292 RSGETAVTLDGIERKLDTADVLIVDD 317 >gi|71901127|ref|ZP_00683233.1| Phenylalanine--tRNA ligase [Xylella fastidiosa Ann-1] gi|71729091|gb|EAO31216.1| Phenylalanine--tRNA ligase [Xylella fastidiosa Ann-1] Length = 349 Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 104/356 (29%), Positives = 179/356 (50%), Gaps = 25/356 (7%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V PS R D+ + DL+EE++RI G + + + P+ + + L + V+R L Sbjct: 2 VVAPSRRFDIAIEEDLIEELVRIRGYEHLPTALPVGASHIAMPSETRLDMT---SVRRQL 58 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 +R + E +N++FI E + ++ ++NP+SA+++ MR LLPGL+ A GRN+ R Sbjct: 59 IARELQETINYAFIDAELLRRWQLNTGQVMLMNPLSAELAVMRPRLLPGLVAALGRNIAR 118 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 + +FE+ +V+ G AA + G ++ + E+ R VD +D K Sbjct: 119 QLERVRLFELGNVFTASDEAG----AAPLETRHVAAAVCGDAFALQWGEQVRKVDFYDLK 174 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 D S+ S L F S A HPGRS + ++ +G+ G+ HP + ++ Sbjct: 175 GDLESLAA--ASGAVLTFHSSAQPCGHPGRSADVWCD-DMCIGWIGQLHPALTQTLEINL 231 Query: 683 PICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-D 741 + FE+ L+ + R + LS V+RDLA +V +H+ L +++V Sbjct: 232 DVIAFELALEPL-----VRRALPRAHALSRFPFVRRDLACVVPEHVTWSELAITVRDVIG 286 Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 L+ DV +FD + GK + G KS+AI +++Q DD R L+DR V++++ K Sbjct: 287 PLLRDVKLFDRYVGKGIEPGFKSLAIGLILQ--------DDTRTLIDRDVDDIMTK 334 >gi|161833639|ref|YP_001597835.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Sulcia muelleri GWSS] gi|152206128|gb|ABS30438.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Sulcia muelleri GWSS] Length = 740 Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 165/670 (24%), Positives = 299/670 (44%), Gaps = 70/670 (10%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAA-----GLGKLKEINISCPLSSESIPLEIKFDL 208 D +I+++++PNR D + GIA DL A L K++++ + K Sbjct: 97 DYLIELNISPNRGDVMSHYGIARDLNIALKYRGFLSKIRDLPPVYLFKKDFSFKNFKIKH 156 Query: 209 DDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFD 268 ++ C + + + +P W++Q L +G + + ++DI N++ + G P +FD Sbjct: 157 FNNKKCIRYTYTTICNINVYDSPKWLKQYLNIIGCNTRNNILDIENFIMYELGQPIKIFD 216 Query: 269 ASRISDVLTVRRACSGEKILAL-DNQEYD----LSPDNVVIASDGRIQSIAGIIGGKHAG 323 +I D + + L DN++ D L+ ++V+ + IAGI+ + Sbjct: 217 LDKIIDFFFKIKFSKKKLKFKLNDNKDKDKDLFLNEKDLVLFNYKNPICIAGILVNQDFV 276 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSL 383 + T ++ +E A + +I R+ K + DS RFERG+D +I LK LI + Sbjct: 277 VNKQTKNLFIESAYYASESIYRTAKKYHLKNDSSIRFERGIDPNLIIYALKRAALLIKEI 336 Query: 384 CGGTASDICIARNITYKPRKI----VFMNSEVKRLS---GIDVPIEDSLRILERLGFSVI 436 GG + + I P KI +F+ KRL G ++ + IL L S++ Sbjct: 337 SGGKIT----SNVIDIYPNKINNIEIFL--RYKRLYNIVGFNINKKKIKEILFLLEISIL 390 Query: 437 GE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSR 494 E ++ ++ VP +R+D+ + D++EEILRIYG + + L Q+ N +L+ Sbjct: 391 FENFNGLKIKVPLYRKDITREIDVIEEILRIYGYNNFCFKHEMFLKQINFNLNKNLKIEN 450 Query: 495 TRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG-QRELEILNPISADMSNMRTSLLPGLL 553 + L S E +N S + F +++ ILN + D+S +R SLL G+L Sbjct: 451 I--ISNQLNSHGFYETLNISLNKNKYINYFNNNLYKKINILNSYNKDLSILRFSLLFGIL 508 Query: 554 KATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 + N++R I + +FE G+KY +K + G + S + ++ Sbjct: 509 ENISYNLNRNINNLKLFEW----------GKKYFFY--KKNIIENKTLGIIISYEIKKNY 556 Query: 614 RFVDLFDAKADALSV---IEPF---VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYF 667 F + L + I+ F + DS+ E+G +Y K ++GY Sbjct: 557 NIFFYFKGILEQLIIRCGIKFFNQKIYKDSI-LENGVSFYY--------KNYIFCIIGYV 607 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT-KKVVHLSSLHPVKRDLAFIVDQ 726 + IL F + N I ++ D I I KK KT K + S L+ +RD++ +++ Sbjct: 608 KK---TILIEFEILNKILYADINWDIINIFFKKNDKTISKKIDNSPLY--RRDISLLIEN 662 Query: 727 HIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRI 785 +I + I ++ I + + D ++ ++L GKKS I F+D + Sbjct: 663 NISFEEIKKISFSIKEKKIIKICLLDEYKSQNLPFGKKSYTISFF-------FKDKN-NN 714 Query: 786 LMDRIVENVV 795 L D ++EN + Sbjct: 715 LTDSLIENTI 724 Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 24/35 (68%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKV 35 MK + +WLK ++ T+ ++ IC+ LT IG VEK+ Sbjct: 1 MKISYNWLKKYISTETDIKLICNILTDIGFNVEKL 35 >gi|258616334|ref|ZP_05714104.1| phenylalanyl-tRNA synthetase subunit beta [Enterococcus faecium DO] Length = 446 Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 116/463 (25%), Positives = 223/463 (48%), Gaps = 32/463 (6%) Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKPRKIVFMNSEVK 412 ++S RFE+G++ + + ++I+SL GG + I + + + Sbjct: 3 SESSARFEKGINHATVGEASEVAAAMIVSLAGGEVLQGAVKGSEIKAEDVSVKISLERIN 62 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + G + +++ I E LGFS + + V VP R D++ +AD++EE+ RIYG DQ+ Sbjct: 63 QYLGTSLVVKEVNEIFEALGFSYEEKEHVYSVVVPPRRWDIQIEADIIEEVARIYGYDQL 122 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE 532 S LP + +LS +Q TR ++ + + E ++++ ++E+S F + + Sbjct: 123 PS-TLPSGET-VAGSLSKEQETTRKIRTIFEGSGLSEAISYALTTEEKSRQFVINESNIT 180 Query: 533 ILN-PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--END----TPEGQK 585 L+ P+S + S +R +L+ GLL N R + A++E+ V+ END P+ K Sbjct: 181 RLDWPMSEERSVLRMNLISGLLDDISYNTARKNTEIALYEIGRVFFQENDPCTHLPQEVK 240 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + A + SGI W +K + + + VD F K ++ E + + +++ Sbjct: 241 HAAIAV----SGI------WEEKDWQTKAQNVDFFTIKGLLENLFEQLGITEDVHYQTVT 290 Query: 645 P-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPGR+ I E +G+ G+ HP I + + E Y+ +S Sbjct: 291 EMKEMHPGRTAAIYL-GEKFIGFVGQVHPTIAKSYDIP------ETYVAEFDLSAVVEAA 343 Query: 704 TKKVVH--LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGE 760 K +V ++ V RD+A +V + + L +I++ R + D+ +FDV+QG+++ + Sbjct: 344 QKGIVFEAVTKFPAVSRDIALLVKETVTNQELTEVIRSAAGRFLTDIQLFDVYQGENIEK 403 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 G KS+A + + T D++I M+++ + +V+ A +R Sbjct: 404 GHKSMAYSLTFVNPEATLTDEEINKGMEKVEKALVENLEASIR 446 >gi|301385322|ref|ZP_07233740.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. tomato Max13] Length = 322 Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 98/310 (31%), Positives = 158/310 (50%), Gaps = 20/310 (6%) Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 ++R+L +R E + +SFI + LF G + L + NPIS DM+ MR SL PGL+KA Sbjct: 28 LRRLLVARGYQEAITYSFIDPKWFELFSPGVKPLLLANPISNDMAAMRASLWPGLVKALQ 87 Query: 558 RNVDRAIADFAIFE--VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 N++R +FE + V + D + Q+ M AG+ GS EG W+ + Sbjct: 88 HNLNRQQDRVRMFESGLRFVGQLDGLK-QEPMLAGVVCGSRLPEG----WAQGRDA---- 138 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNI 674 VD FD KAD +V+ +L F G HPG++ I++ E+ G+ G HP + Sbjct: 139 VDFFDVKADVEAVLGFAGALGEFTFAPGQHPGLHPGQTARILRDGREV--GFLGAIHPEL 196 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLV 734 GL P+ FE+ L + + K LS V+RDLA + D+ + A ++ Sbjct: 197 SKNLGLDRPVFVFELVLAEVATG-----RLPKFHELSRFPEVRRDLALLADRDVSASAVL 251 Query: 735 NIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 ++I+ N + D+ +FDV+QGK + +KS+A+ + Q T DD++ I+ + Sbjct: 252 DVIRENAGEWLTDLRLFDVYQGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTS 311 Query: 794 VVKKTNAVLR 803 + ++ NA LR Sbjct: 312 LEERLNATLR 321 >gi|330720847|gb|EGG99043.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium IMCC2047] Length = 345 Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 108/367 (29%), Positives = 180/367 (49%), Gaps = 32/367 (8%) Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL---TQVEDKRNLSLQQSRTRYVKRVL 502 +PS+R D+ +ADLVEE+ RIYG ++ LP+ T + + + + ++RVL Sbjct: 1 MPSYRFDIAIEADLVEELARIYGYNR-----LPVCAPTATLTPKPANEAKVSIKSLRRVL 55 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 +R E + +SF+ + F + +E+ NPISADMS MRTSL PGL +A N +R Sbjct: 56 LARGYNEAITYSFVDPKMQAYFDTSDQGIELANPISADMSLMRTSLWPGLAQALQHNQNR 115 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS--SGIEGSGRL---WSDKSEERCRFVD 617 +FE + K +AGI + + G+ GR W +K+E VD Sbjct: 116 QQQRVRLFESGLTF--------KRSSAGIEQVAKIGGVIAGGRHEESWLEKTES----VD 163 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 +D K D +++ + F + HPG+S I + E V G+ G HP+I Sbjct: 164 FYDVKGDVEALLAMGGAAQEFTFVAKTHHALHPGQSASIMRNGEEV-GFVGALHPSIEKA 222 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII 737 GL+ P+ FE+ L I ++ LS V+RDL+ +V + +V+ + Sbjct: 223 LGLNGPVYLFELSLAGI-----EQGVIASFTELSKFPEVRRDLSILVSSSVELSAIVDDM 277 Query: 738 K-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 K + + DV +FD++ GK + KS+A+ + Q T D++I + ++ ++ K Sbjct: 278 KASAGEWLTDVRLFDLYDGKGIEPDHKSLALGLTWQHTSRTLTDEEISEFIGNVINSLEK 337 Query: 797 KTNAVLR 803 + +A LR Sbjct: 338 QFSAKLR 344 >gi|224540819|ref|ZP_03681358.1| hypothetical protein BACCELL_05733 [Bacteroides cellulosilyticus DSM 14838] gi|224517564|gb|EEF86669.1| hypothetical protein BACCELL_05733 [Bacteroides cellulosilyticus DSM 14838] Length = 250 Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 134/242 (55%), Gaps = 8/242 (3%) Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGIESTGMMCSEKELMLSD 128 + +Q+VCGAPNV G V A G+ + + + ++K +RG+ES GM+C+E E+ + Sbjct: 3 EPVQIVCGAPNVAAGQKVVIATLGAKLYDGDECFTIKKSKLRGVESNGMICAEDEIGIGT 62 Query: 129 DSASIMELPIDAPVGGRLSDYLEL-SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLK 187 D A I+ LP DA G DY + SD +++V +TPNR+D G+A DL A + K Sbjct: 63 DHAGIIVLPADAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHYGVARDLYAYLVQNNK 122 Query: 188 EINISCP----LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGL 243 ++ P + E+ L+I +++S C +A VKGV +P W++ +L+ +GL Sbjct: 123 PTSLKKPSVDAFAVENHDLDINVTVENSEACPRYAGVTVKGVTVKESPEWLQNKLRIIGL 182 Query: 244 RSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNV 302 R I+ +VDITNY+ G P H FDA +I + VR G + LD E LS ++ Sbjct: 183 RPINNVVDITNYIVHAFGQPLHCFDADKIKGGEVVVRTMPEGTPFVTLDGVERKLSDRDL 242 Query: 303 VI 304 +I Sbjct: 243 MI 244 >gi|15828818|ref|NP_326178.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma pulmonis UAB CTIP] gi|81532976|sp|Q98QL4|SYFB_MYCPU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|14089761|emb|CAC13520.1| PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (PHENYLALANINE--TRNA LIGASE BETA CHAIN) (PHERS) [Mycoplasma pulmonis] Length = 718 Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 166/698 (23%), Positives = 300/698 (42%), Gaps = 115/698 (16%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M F+++ L+D +LD ++ ++I D + IG EVE V N +S + V +NP+ Sbjct: 1 MLFSINKLRDLANLDKQITNDQIIDAINKIGFEVESVKNFLNVSKIKFGLIKKVYKNPNA 60 Query: 59 -DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + + I+ I + A NV V S + + + ++I+G S GM Sbjct: 61 SNLNVCEIEFEDKMRI-IQTTAQNVEQNKYIVAFVENSTFGK--IKIEAKEIKGTFSQGM 117 Query: 118 MCSEKEL-----MLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 +CS +EL ++ D+ + L A + D+ +L D I+DVS+ NRSD G Sbjct: 118 LCSLEELGFDKSLIRDEFQDKIFLLDKADLKQDPIDFFDLDDQIVDVSILSNRSDANGYF 177 Query: 173 GIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 +AL+L A E + + +E + +D+++ F + + P Sbjct: 178 IMALELSA-----FFETKTNFEIKNEIFKIHPNLKVDETNTL-DFVL---------IEP- 221 Query: 233 WMRQRLKAVGLR-----------SISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRA 281 ++ LK + L+ + + LVD+TN + P+HV+D +IS+ ++V++ Sbjct: 222 --QKELKKISLKDQILIMKSNIKTFNDLVDLTNLNLIMNAMPTHVYDKDKISNEISVKKV 279 Query: 282 CS-----GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 G K ++LDN N+V+ S + SIAG+IG G D NT + + E+ Sbjct: 280 SQEVSILGNKKISLDN--------NLVVCSKEKPISIAGVIGIADFGSDQNTKNFVFEIG 331 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 + ++I +S K++ + T S + + L + S S + +++N Sbjct: 332 RFKTLDIQKSIKSVKLDTQSSKLSSKKISSGTFKMALNFLTSYF-------DSQVLVSKN 384 Query: 397 ITYKPRKIVFMNSEVKRLSGIDVP----IEDSLRILERLGFSVIGEYDKFEVSVPSWRQD 452 + K F+ ++ + DV L+ L LGF E+ +V +P++R D Sbjct: 385 LKDKKESFNFVWEDLNKFLNTDVKKMPHFNRVLKSLNILGF----EFKDNKVYLPTYRHD 440 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 +E D++EE LR YG + + E + E K + ++ + S E Sbjct: 441 IEHVQDILEEFLRFYGYENLVFEAPNIKNFETKN----YEEYLNFIPYLNYS----ETRT 492 Query: 513 WSFISKEQSVLFGGGQRE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 +S +SK++++ +E LE + S + +R S++ + + N+ R + + I Sbjct: 493 YSLVSKDKNIFNPFNFKENINLETFH--SKEREQIRNSMILSMEEVLQYNLKRKVENVNI 550 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 FE+ GI S L + KS R K D S++ Sbjct: 551 FEI-----------------GIINNSQ--RSLALLSNQKSFNRF--------KEDVESIL 583 Query: 630 EPFVSLDSLR-FESGAPSWYHPGRSGIIKTSAEIVLGY 666 + D L FE G + HP S IIK + +++ GY Sbjct: 584 K-----DKLYSFEKGGFDFSHPLESIIIKDNDQLI-GY 615 >gi|162661180|gb|EDQ48694.1| predicted protein [Physcomitrella patens subsp. patens] Length = 384 Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 118/379 (31%), Positives = 184/379 (48%), Gaps = 35/379 (9%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRN---LSLQQSRTRYV 498 EV VP+ R D+ + DL+EEI R+YG D I P T +E + Q+ R + Sbjct: 23 LEVQVPTRRGDITKDVDLIEEIARLYGYDNI-----PTTAIEGPTTPGGYTKPQAIRREI 77 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKA 555 +R+ EV+++SF + + LF G +++ P+S + S +RTS+LP LL Sbjct: 78 RRLFTHGGWQEVISYSFTHPDLAALFPALTEGSVPVKLSMPMSEERSVLRTSILPQLLDI 137 Query: 556 TGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 N +R D A+FEV +V+ + T Q + G G + W+ E+ Sbjct: 138 AVHNANRKQYDLALFEVGNVFFSQEQTLTVQPKELNVLSLLLCGNRGQ-KQWNYAPEK-- 194 Query: 614 RFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSG---IIKTSAEIVL-GYFG 668 VD FD K AL + + L+ ++R+ + P+ YHPGRS +I E VL G G Sbjct: 195 --VDFFDLKG-ALETLFGDLGLEGAIRYVANQPAGYHPGRSASVYLINGGGEQVLIGTLG 251 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 + HP + GL + VY+ I P+ + L +RD+A +VD Sbjct: 252 QVHPELQQERGLGD------VYVAEILLQPLYDHADFDIR-YQELPRFPASERDIAVVVD 304 Query: 726 QHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 + AG+L+ I+ L+ +V VFDVF G LGEGKKSVAI ++ + + T D+++ Sbjct: 305 SAVEAGSLLETIREAAGELLQNVQVFDVFTGSKLGEGKKSVAISLVYRHNERTLTDEEVT 364 Query: 785 ILMDRIVENVVKKTNAVLR 803 +V + +K A LR Sbjct: 365 AAHAGVVSALEQKFQAELR 383 >gi|213586390|ref|ZP_03368216.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 361 Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 109/374 (29%), Positives = 181/374 (48%), Gaps = 31/374 (8%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP---LTQVEDKRNLSLQQSRTR 496 D+++ P+WR D+E + DLVEE+ R+YG + I EP+ + + +LSL++ Sbjct: 8 DEWKAVAPTWRFDMEIEEDLVEEVARVYGYNNIPDEPIQAGLIMGTHREADLSLKR---- 63 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 VK +L + EV+ +SF+ + L G L + NPIS +MS MR SL GLL Sbjct: 64 -VKTMLNDKGYQEVITYSFVDPKVQQLIHPGAEALLLPNPISVEMSAMRLSLWSGLLATV 122 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEG----QKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 N +R IFE + DT Q M AG+ G+ E W+ E Sbjct: 123 VYNQNRQQNRVRIFETGLRFVPDTQANLGIRQDLMLAGVICGNRYDEH----WNLAKET- 177 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 VD +D K D +V++ L ++F++ HPG+S I E + G+ G HP Sbjct: 178 ---VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERI-GFIGVVHP 233 Query: 673 NILDFFGLSNPICGFEVYLDSIP--ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 + L+ FE+ + + I + R +S +RD+A +V +++PA Sbjct: 234 ELERKLDLNGRTLVFELEWNKLADRIVPQAR-------EISRFPANRRDIAVVVAENVPA 286 Query: 731 GTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 +++ K + V +FDV++GK + EG KS+AI +++Q T +++I + + Sbjct: 287 ADILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAK 346 Query: 790 IVENVVKKTNAVLR 803 VE + ++ A LR Sbjct: 347 CVEALKERFQASLR 360 >gi|76799130|ref|ZP_00781316.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] gi|76585516|gb|EAO62088.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] Length = 423 Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 102/396 (25%), Positives = 196/396 (49%), Gaps = 25/396 (6%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G ++ D + E+LGF++ G KF V VP R D+ +ADLVEEI RIYG +++ + Sbjct: 45 GTELTYTDIEEVFEKLGFAISGSEVKFTVLVPRRRWDIAIQADLVEEIARIYGYEKLPT- 103 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-EIL 534 LP S+Q+ R R V+ V + E++ ++ + E++V F + E++ Sbjct: 104 TLPEAGATAGELTSMQRLRRR-VRTVAEGAGLSEIITYALTTPEKAVQFSTQATNITELM 162 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 P++ D S +R +++ G+L NV R ++ A++E+ V+E T ++ + + Sbjct: 163 WPMTVDRSALRQNVVSGMLDTIAYNVARKNSNLAVYEIGKVFEQ-TGNPKEDLPTEVETF 221 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF---VSLDSLRFESGAPSWYHPG 651 + + +G + + + + VD F AK ++E + LD + HPG Sbjct: 222 TFAL--TGLVEEKDFQTKAKPVDFFYAKG----IVEALFIKLKLDVTFVAQKGLASMHPG 275 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH-- 709 R+ I + + G+ G+ HP + + E Y+ I +S + + ++ Sbjct: 276 RTATILLDGKEI-GFVGQVHPQTAKQYDIP------ETYVAEINLSTIESQMNQALIFED 328 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVFQGKSLGEGKKSVAI 767 ++ V RD+A ++ + + +V+ I+ V RL + +FDV+ G ++ EG KS+A Sbjct: 329 ITKYPSVSRDIALLLAESVSHHDIVSAIETSGVKRLT-AIKLFDVYAGNNIAEGYKSMAY 387 Query: 768 QVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + Q D D+++ M++I +++V+K NA +R Sbjct: 388 SLTFQNPNDNLTDEEVAKYMEKITKSLVEKVNAEIR 423 >gi|313678204|ref|YP_004055944.1| phenylalanine--tRNA ligase subunit beta [Mycoplasma bovis PG45] gi|312950173|gb|ADR24768.1| phenylalanine--tRNA ligase, beta subunit [Mycoplasma bovis PG45] Length = 728 Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 186/775 (24%), Positives = 355/775 (45%), Gaps = 114/775 (14%) Query: 15 DVSLEKICDTLTSIGLEVE---KVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQ 71 D S+EK ++ +G EVE K + E + ++ V E + +L+ ++ ++G Sbjct: 18 DSSIEK---SINDLGYEVESITKFSDVEGVKFGYVLDVYKNENSKNLNVVNIKTNSG--- 71 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-----ML 126 I + A NV+ V G+ E ++ +++ GI S GM+ S EL +L Sbjct: 72 NITIQTTASNVKKDSWIVAFVEGAKKGE--IVFGKKEMAGIVSNGMLASFSELGYDSSLL 129 Query: 127 SDDSASIMELPIDAPVGGRLS--DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 D ++ L D+ + ++ DY L D IID++ NR++ +A++L A Sbjct: 130 PFDPNEVILLD-DSSINENMNPMDYFGLDDYIIDITTPANRAESNSYYVLAMELAAFYNT 188 Query: 185 KLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP--NWMRQRLKAVG 242 K ++S P IK D++S F +K + ++ ++ + A G Sbjct: 189 KFVWPDLS-PKDHYRFRSNIKVLKDEASELTFFE-AKIKNKKTSLQDILFLVKHGINAKG 246 Query: 243 LRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV 302 + +I D+TN L G P+HV+D ++I LT + SGE I L ++ ++S D + Sbjct: 247 IYAI----DLTNITLLVTGSPAHVYDKNKIGKSLTCSK-FSGE-IEILGGKKINVS-DVL 299 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 I + ++ S+A ++G + + D+NT +V+ EV L+DP+ + S + + I + S + R Sbjct: 300 AIKDENKVLSLASVMGCESSAVDENTKEVVFEVGLFDPLLVRHSAREIKIDSASSIQAGR 359 Query: 363 GVDLQ---GMIPVLKH-------IVSLILSLCGGTASDICIARNITYKPRKI-VFMNSEV 411 ++ Q I LK+ +VS I++L I ++I +K+ ++ N + Sbjct: 360 LLNAQISFNGISFLKYKSGIDGQVVSQIINL-----PKIRKGKSIIQSRKKLSIYANCNI 414 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 K L+ D +E +L+ ++GFS+ DK V P++R D++ D++EE R YG Sbjct: 415 KDLTKFD-SVEQTLK---KIGFSM----DKNRVIAPTYRTDIQNYEDVIEEYFRFYGYSN 466 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-GGGQRE 530 + L S + S K +L S E+ +S +S E + ++ Sbjct: 467 FSATSPKLE--------SFKISHKVDNKNILQSMGYNEIRTFSLVSSESNKFNPFNFEKT 518 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 ++++ +S + +R S++P LL++ N+ R I++ + FE + +N K++ Sbjct: 519 VKLMTFVSKEREEIRNSIVPSLLESADFNLKRKISNISFFEHGMINDN------KFVY-- 570 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYH 649 G L ++K+ E+ R D+F+ K D L + PF + + A +H Sbjct: 571 -----------GLLSNEKTFEQMR-QDVFNFLKVDNLEFV-PFRDNEFIHLNVSAK-IFH 616 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH 709 G +G+ G+ HP + SN + ++S+ +++K + + Sbjct: 617 NGN----------FIGWIGKVHPTV----NSSNLWVAEFMNIESV-----QKSKIEFSTY 657 Query: 710 LSSLHPVKR-DLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKK 763 SS P+K DL F ++++ P ++ I + +L F++ Q S G+K Sbjct: 658 DSS--PLKSIDLTFTINKNEPLRDTISKINAIAKL------FNIQQIDSFDNGEK 704 >gi|168705644|ref|ZP_02737921.1| phenylalanyl-tRNA synthetase, beta subunit [Gemmata obscuriglobus UQM 2246] Length = 347 Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 104/346 (30%), Positives = 166/346 (47%), Gaps = 47/346 (13%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD---------------------NRE 39 M LSWLKD++ + + LT GLE V R+ Sbjct: 8 MLVPLSWLKDYVPLPADPGALVERLTIAGLESSGVKLFGVPAAGTLRVKPEDAGLVWERD 67 Query: 40 ALSPFTIVKVLSVERNPDLDC-AILRIDTGKHQEIQVVCGAPNVRVGLLGV--------- 89 L + +VL + ++P+ D +++++ G + V+ GA N+ G G+ Sbjct: 68 KL---VVAQVLEITKHPNADSLKLVKLNYGAGEPKTVITGAENIAPGQSGMKIVLGLRGS 124 Query: 90 -WAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP-IDAPVGGRLS 147 + G + M + + +RGI++ M S+ EL ++++S I+ L DA G + Sbjct: 125 RYFFTGKDGKKTVMTLEPKALRGIDNDAMCMSDFELGIAEESEGIIILDDADAEPGTPVQ 184 Query: 148 DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISC-PLSSESIPLEIKF 206 D L + ++++ + PN + C+ + GIA + VAA G I P+S E + ++ Sbjct: 185 DVL--GEVVVELDILPNMARCLSMHGIARE-VAALTGVAATIPTPVVPVSHEKVEGKVHV 241 Query: 207 DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 ++ D LC + V+ V AP WMR RL A G+R I+ VDITNYV L+ G P H Sbjct: 242 EIADPKLCGRYTATVVRNVTVKDAPRWMRSRLHAAGMRPINNAVDITNYVMLEHGQPLHA 301 Query: 267 FD-------ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA 305 FD A + +TVR A +GE + LD Q+ +LSPDN+VIA Sbjct: 302 FDYDVLVARAGGKAPTITVRSAKAGETLKTLDGQDRELSPDNLVIA 347 >gi|218660030|ref|ZP_03515960.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli IE4771] Length = 140 Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 64/135 (47%), Positives = 88/135 (65%) Query: 85 GLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGG 144 GL+G +A PG+ +P ++ + V IRG+ES GMMCSEKEL +SD+ I++LP DAPVG Sbjct: 5 GLIGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMCSEKELQISDNHDGIIDLPDDAPVGQ 64 Query: 145 RLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEI 204 + Y L DP+I+++LTPNR DC + GIA DL A+GLG LK P+++ Sbjct: 65 SYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLAASGLGTLKTRTAPSFSVEGETPIKL 124 Query: 205 KFDLDDSSLCKGFAM 219 DLDD LC GF++ Sbjct: 125 TLDLDDPKLCPGFSL 139 >gi|153842352|ref|ZP_01993494.1| phenylalanyl-tRNA synthetase beta chain [Vibrio parahaemolyticus AQ3810] gi|149745390|gb|EDM56641.1| phenylalanyl-tRNA synthetase beta chain [Vibrio parahaemolyticus AQ3810] Length = 165 Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 63/154 (40%), Positives = 95/154 (61%) Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM+++L+ G+RSI +VDITNYV L++G P H FD ++I + VR A GEK+ L Sbjct: 12 PLWMQEKLRRCGIRSIDPVVDITNYVLLEQGQPMHAFDLAKIEGGIVVRMAEQGEKLTLL 71 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 D E +L+ D +V+A + +IAGI GG+ +G T DVL+E A + P +I ++ Sbjct: 72 DGSEAELNADTLVVADHSKALAIAGIFGGEESGVTTETKDVLLECAFFAPDHIRGRARSY 131 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 G+ TDS RFERGVD + ++ L++ +C Sbjct: 132 GLHTDSSMRFERGVDYALQVSAMERATQLLVEIC 165 >gi|12045047|ref|NP_072857.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma genitalium G37] gi|255660200|ref|ZP_05405609.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma genitalium G37] gi|1351152|sp|P47437|SYFB_MYCGE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3844792|gb|AAC71413.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma genitalium G37] gi|166078860|gb|ABY79478.1| phenylalanyl-tRNA synthetase, beta subunit [synthetic Mycoplasma genitalium JCVI-1.0] Length = 806 Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 179/751 (23%), Positives = 325/751 (43%), Gaps = 90/751 (11%) Query: 17 SLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP-DLDCAILRIDTGKHQEIQV 75 S ++I L +G+EVE + + + KV+S++ +P D I + K++ I V Sbjct: 19 SNDQIAQKLEQMGIEVESIKQFNSPDYLQLAKVVSIQPHPHDNKLFICELQIDKNKFINV 78 Query: 76 VCGAPNVRVGL----LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 V A N+ + A G+ + N +IV + I+GI S G++CS ++ + S Sbjct: 79 VSNANNINNPDNINKFVIVAKKGTELL-NGLIVKTQNIKGIISEGILCSYIDI--NPFSR 135 Query: 132 SIMELP--IDAPVGGRLSD---------YLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 I+E DA + +S+ +L L D I DV NR+D +L +A Sbjct: 136 QIIEKTEVADAIIIDHVSNDHDWNQYLSFLSLDDVIFDVKTPTNRADLH-----SLIFLA 190 Query: 181 AGLGKLKEINISCPLSSESIPLEI-KFDLDDSSLCKG--FAMCCVKGVRNNVAPNWMRQR 237 LG L + S + + KF L+ + K F ++ + + +P ++ Sbjct: 191 KELGVLLKTKTFLKQKSSVVNHDFFKFPLNLKNKLKANYFGGLFLRQINQHSSPWTVKGL 250 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L ++ ++ VD N V++ P H DA RI + +++A E + LD+++Y++ Sbjct: 251 LINQMIKPVNYYVDKANLVTVFTAQPIHCHDADRIVGNIELKQATHNETFVGLDDKQYEI 310 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 P ++V+ + I ++ GIIG K TT++ EV + I ++ K I + Sbjct: 311 EPGDIVVCDEKGIIALVGIIGSKRTMVQPTTTNIFFEVVNCNSETIKQTAKRFLINNFAS 370 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVFMNSEVKRLSG 416 + + L L ++ + +L+ G S + + +K+ ++++L G Sbjct: 371 KFMVKPISLLATDNCLNYLQNSLLTTDNIGKISHFSSSLKVEPFSKKLTVNFHKIRQLIG 430 Query: 417 I------DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 I D I+ S L +LGF V D + +PS+RQD+ D+ EEI+++ ++ Sbjct: 431 IEKKELTDQTIKKS---LSQLGFKV----DNQLLKIPSYRQDINTWQDISEEIVKLIDIN 483 Query: 471 QIKSEPLPLT---QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++K P+ +T E + + T+ K+ L + V+ + ++ + F Sbjct: 484 KLK--PIGITSSFNFEKSSYFNTFNALTKLRKK-LQTLGFHNVITYQLTDQKSAKTFNLF 540 Query: 528 QRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE--- 582 E + I NP+S + S MR SL+ LLK N + IFE S + + E Sbjct: 541 NLENFITIKNPVSQNHSVMRVSLIDSLLKVLKTNNNYKNELVNIFEFSFIKTQNNSELHL 600 Query: 583 ----GQKYMAA------GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 +K + GI ++G +L C F L D+ + F Sbjct: 601 AVLWVEKLFTSSFNPMQGISNDVFTMKGLAKLIVANLGFSCDFEPLDDS--------DYF 652 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN-PICGFEVYL 691 V+ SL+ I+ + +I G+ G ++L+ + L+N PI E+ L Sbjct: 653 VNNQSLK---------------IVVFNEQI--GFIGLIKESLLNNYDLNNKPIYCLEINL 695 Query: 692 DSIPISQKKRTKTKKVVHLSSLHPVKRDLAF 722 D + +S R + K + S L PV +DL F Sbjct: 696 DRM-LSSLNRIE-KNYLGYSKLQPVCKDLTF 724 >gi|294155575|ref|YP_003559959.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma crocodyli MP145] gi|291600322|gb|ADE19818.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma crocodyli MP145] Length = 726 Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 147/595 (24%), Positives = 261/595 (43%), Gaps = 45/595 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEK-ICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+L L +L + L K + + +G EVE + + + + +NP+ D Sbjct: 1 MIFSLKKLNTYL-PGIKLNKDVEQVINKLGFEVESIKKFSTIEGVVFGLIKELYKNPNSD 59 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + KH + + ++V L V GS + + ++ + ++ I S GM Sbjct: 60 LLTVATVETKHGNLTIQTTDNVLKVDDLVVCFIEGSKMGD--IVFKTKNLKNIPSQGMFA 117 Query: 120 SEKEL-----MLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +EL + D I+ L + A + L+L D I+DVS T NR+D Sbjct: 118 SYEELGFDGKLFGDLGEHILRLDKNFASINDDPMQVLQLDDYILDVSTTANRNDANSYYV 177 Query: 174 IALDLVAAGLGKL--KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A +L A + E N L S+ I D S+ F C K N+ Sbjct: 178 MAKELAAYYETEFVFNEKNHKGSLFSD-----IAIDRGMSNEITMFQAYCDKEFDLNIFD 232 Query: 232 NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALD 291 + + S+ V++TN V + G P HV+D ++I L + K+ L Sbjct: 233 KMLLAKHNID--TSLGWAVNLTNLVLIITGAPCHVYDKNKIG--LKITSELYSGKLKLLG 288 Query: 292 NQEYDLSPDNVVIASD-GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 N++ D+ +NV+I D + S+A ++G + D+ T + + E+ ++DP I S K + Sbjct: 289 NKDVDV--ENVLIIRDENKPISVASVMGLETTKVDEKTKEFIFEIGVFDPTLIRHSVKQI 346 Query: 351 GIITDSRYRFERGVDLQ----GMIPVLKHIVSLILSLCGGTA-SDICIARNITYKPRKI- 404 ++++S + R + + G++ + K++ +S+ I + I + K+ Sbjct: 347 KLLSNSANQASRTITNEILELGILFLRKYLNDNKISISNLLGIPKIGPKKMIKFDKEKLS 406 Query: 405 VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEIL 464 V+ + L IE L++LGFS E + EV VP +R D+ D++EEI Sbjct: 407 VYSDQNTSSLKKFIPAIEK----LKKLGFSFDLEVN--EVYVPIYRYDINYFEDIIEEIF 460 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL- 523 R Y D EP+ L+ N S + + +K L + E++ +S +SK+++ L Sbjct: 461 RFYSYDNF--EPVQLS------NTSFKIHKRSTIKHELQANGYNEILTYSLLSKQKNFLN 512 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 Q EL + +S + +R S++P +L+A N R I FEV + N Sbjct: 513 VFDFQEELALETFVSKEREVIRNSIIPSMLEAVEYNQKRKINKINFFEVGMINNN 567 >gi|313638231|gb|EFS03473.1| phenylalanyl-tRNA synthetase beta chain [Listeria seeligeri FSL S4-171] Length = 317 Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 92/318 (28%), Positives = 164/318 (51%), Gaps = 15/318 (4%) Query: 1 MKFTLSWLKDHLDT-DVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ + +S E++ + +T G+E+E V+ A L + +VL+ ER+PD Sbjct: 1 MLVSYNWVKEFFEEFPLSAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLTCERHPDA 60 Query: 59 D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + + T + + +Q++CGAPNV G + A G+ +P + + K+RG S GM Sbjct: 61 EKLNKCLVQTDEKEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVSEGM 119 Query: 118 MCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +CS EL + I LP VG L L D I+D+++TPNR+D + + Sbjct: 120 ICSLSELGFESKVVPKAYADGIYVLPEHVEVGVSAISLLGLDDAILDMAITPNRADALSM 179 Query: 172 RGIALDLVAAGLGKLKEINISCPLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNV 229 G+A ++ A + K + P SE + + ++++ + +A+ V+ + Sbjct: 180 NGVAHEVGA--IIHQKPAQPTQPDVSEKGTADTFLTVEVENPTETPYYAIKMVENITIKE 237 Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKIL 288 +P W++ +L G+R + +VD+TNY++L G P H FD +I S + VR A E+I Sbjct: 238 SPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFDYDKIGSKKIVVRSAKENEEIT 297 Query: 289 ALDNQEYDLSPDNVVIAS 306 LD ++ L + VI + Sbjct: 298 TLDGEKRKLQAGHTVITN 315 >gi|307128510|ref|YP_003880540.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Sulcia muelleri CARI] gi|306482972|gb|ADM89842.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Sulcia muelleri CARI] Length = 666 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 114/470 (24%), Positives = 229/470 (48%), Gaps = 37/470 (7%) Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS-DPIIDVSLTPNRSDCIGVRGIALD 177 C ++ L + +I ++ D +G + ++ L D +I++++ PNR + + GIA D Sbjct: 7 CLKQYLSTEEKIENICKILTD--IGLHVENFFSLKKDYLIELNIPPNRGEIMSHYGIARD 64 Query: 178 L-VAAGLGKLKEINISCP---LSSESIPLE-IKFDLDDSSLCKGFAMCCVKGVRNNVAPN 232 L +A K P L + + ++ I F + + C + + + +P Sbjct: 65 LNIALKFRGFKSKMRKLPSVFLFKKDLDIKNINFLIKNYKKCIRYTYTTICNINVFDSPK 124 Query: 233 WMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN 292 W++ L +G SI+ ++DI +++ + G P +FD +I + +++R +KI+ Sbjct: 125 WLKNYLYNIGYNSINNILDIEHFLMYELGQPIKIFDLDQIRN-FSIKRENFKKKII---- 179 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 L+ +++++ ++ ++AGI+ K NT ++ +E A + I ++ K I Sbjct: 180 ----LNENDLILLNNKNPIALAGILINKDFLVKKNTKNLFIESASYSSEYIYKTAKKYHI 235 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG---TASDICIARNITYKPRKI----V 405 DS RFERG+D +I LK LI + G SD+ I P+KI + Sbjct: 236 KNDSSIRFERGIDPNFIIYALKRAALLIKKISGAGVKITSDV-----IDLYPKKINNIEI 290 Query: 406 FMNSE-VKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEI 463 F+ + +K + G ++ I+ +IL L ++ E + ++ +P +R+D+ + D++EEI Sbjct: 291 FLRYKIIKYIIGYNINIKKIKKILFLLEIDILFENLNGLKIKIPLYRKDITREIDVIEEI 350 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 LRIYG + + + + + + N ++ + L S E +N S ++K++ + Sbjct: 351 LRIYGYNNFIKKKIYINKNYNINNNLKIEN---IISNQLNSHGFYETLNIS-LNKKKYIK 406 Query: 524 FGGGQR--ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + R ++ ILN + ++S +R SLL GLL+ N++R +FE Sbjct: 407 YYSNNRYKKINILNSYNKNLSILRFSLLFGLLENISYNLNRNKKKIKLFE 456 >gi|148377337|ref|YP_001256213.1| phenylalanyl-tRNA synthetase beta chain (PheT) [Mycoplasma agalactiae PG2] gi|148291383|emb|CAL58767.1| Phenylalanyl tRNA synthetase beta chain (PheT) [Mycoplasma agalactiae PG2] Length = 726 Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 147/600 (24%), Positives = 275/600 (45%), Gaps = 69/600 (11%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN---PDLDCAILRIDT 67 ++ D S+EK ++ ++G EVE + + VL V +N +L+ ++ +T Sbjct: 14 EINLDSSIEK---SINNLGYEVESIKQFSDVKGIKFGYVLDVFKNENSKNLNIVSIKTNT 70 Query: 68 GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL--- 124 G I + A NV+ V G+ E ++ +++ G+ S GM+ S EL Sbjct: 71 GI---ITIQTTATNVKKNHWIVAFVEGASKGE--IVFGKKEMAGVVSNGMLASYSELGYD 125 Query: 125 --MLSDDSASIMELPIDAPVGGRLS--DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 +L D ++ L D+ + L Y L D IID++ NR++ +A++L A Sbjct: 126 SSLLPFDPNGVILLD-DSSINEDLDPIKYFNLDDYIIDITTPANRAETNSYYVLAMELAA 184 Query: 181 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP-----NWMR 235 K N+ P + IK ++++ F ++NN + Sbjct: 185 YYKTKFVWPNL-LPKDNYRFRSNIKVSKNEATELTFFEA----RLKNNKTSLKDILFLAK 239 Query: 236 QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEY 295 + A GL +I D+TN L G P HV+D ++I L+ + SGE + L ++ Sbjct: 240 HGINAKGLYAI----DLTNIALLVAGVPCHVYDKNKIGKSLSCSK-FSGE-LEILGGKKV 293 Query: 296 DLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +S D + I + + S+A ++G +++ D+NT +V+ EV L+DP+ + + + + T Sbjct: 294 SVS-DVLAIKDETGVISLASVMGCENSAVDENTKEVVFEVGLFDPLLVRHGAREIKMDTA 352 Query: 356 SRYRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDICI-----ARNITYKPRKI-VF 406 S + R ++ Q I LK+ +L C + + I +++ +K+ ++ Sbjct: 353 SSIQAGRALNSQIVFNGISFLKYKSALD---CQSVSQIVNIPKVKKGKSVIQSRKKLSIY 409 Query: 407 MNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 N +K LS D D + L+++GFS+ DK V P++R D++ D++EE R Sbjct: 410 ANCNIKDLSIFD----DVEKTLKKIGFSM----DKNRVIAPTYRSDIQHYEDVIEEYFRF 461 Query: 467 YGVDQIKSEP--LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 YG K E L L +V + + K +L S E+ +S IS E ++L Sbjct: 462 YGYSNFKPEAPKLELYKV----------AHSVDNKNILQSLGYNEIRTFSLISSEMNILN 511 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 + ++++ +S + +R S++P LL++ N+ R I + ++FE + +N G Sbjct: 512 PFNFESTVKLMTFVSKEREEVRNSIIPSLLESAEFNLKRKINNVSLFEHGMINDNKFVYG 571 >gi|167946270|ref|ZP_02533344.1| phenylalanyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 221 Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 118/204 (57%), Gaps = 16/204 (7%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ +WL++ + V+ E++ + + GLEV+ V+ A S + +VL++E +PD + Sbjct: 1 MKFSEAWLREWANPAVATEELAEQFSMAGLEVDSVEPVAPAFSGVVVGEVLAIEPHPDAN 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 I ++ + +Q++CGA NV G+ A G+ +P + + K+RG++S GM+ Sbjct: 61 KLRICSVNVNAEEPLQIICGAANVAEGMRVPVAVVGARLP-GDFKIKKAKLRGVQSLGMI 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L+D S IM LP DAPVG D+L+L D ID+ LTP+R DC+G+ GIA Sbjct: 120 CSASELGLADSSDGIMPLPADAPVGDDFRDWLQLDDQTIDIDLTPDRGDCLGIAGIA--- 176 Query: 179 VAAGLGKLKEINI--SCPLSSESI 200 +E+ + CP++S I Sbjct: 177 --------REVGVINRCPVTSPQI 192 >gi|242309363|ref|ZP_04808518.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter pullorum MIT 98-5489] gi|239523934|gb|EEQ63800.1| phenylalanyl-tRNA synthetase beta chain protein [Helicobacter pullorum MIT 98-5489] Length = 789 Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 126/417 (30%), Positives = 199/417 (47%), Gaps = 75/417 (17%) Query: 417 IDVPIEDS--LRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 I VP++ S +++L+ L F V + + + V P +R D+ D+ EEI+R G+D++ Sbjct: 418 IGVPLDKSKVVQLLQALEFQVEILTDENLLVVVPPLFRHDISNYQDIAEEIIRFIGIDEV 477 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM----MEVVNWSFISKEQSVLFGGG- 527 S PL Q N S ++SR + KR LA +A+ E V++ F KE+ + +G Sbjct: 478 PSSPLMFVQ----GNQSSEESRLYHFKRELAKKAIGTGFSESVHFVFQDKEKLLKYGFQT 533 Query: 528 -QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 Q ELE+LNPI+ +++ +R SLL GLL+A N + A+ EV Y D Q Sbjct: 534 LQEELELLNPITRELNTLRPSLLLGLLQAAKLNRNNGFNSIALVEVGETY--DARRNQNT 591 Query: 587 MAAGIRKG---------SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 A ++ G + GI+G D F VI F + Sbjct: 592 KIAFLQSGFVMEERYPNAKGIKG----------------DYFIFANHIARVIGDF----T 631 Query: 638 LRFESGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 LR + YHPG+ + II+ + E+ G HP + + FGL E YL I + Sbjct: 632 LRECVSEIALYHPGQCAKIIQNNQEV--GILSTLHPQVAEEFGLD------ETYLCEIEV 683 Query: 697 SQKKRTKTKKVVHL-------SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTV 749 K+VHL S V RDL+ +V+++IP L +I N+ I DV Sbjct: 684 D--------KLVHLMPKVKDYSKFQKVVRDLSIVVNKNIPYYKLREVIGNLG--IADVVG 733 Query: 750 F---DVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 F D++ ++LGE + S+ I+ IQ + T + DI +MD+I+E++++ LR Sbjct: 734 FYPLDIYHDENLGE-EISLTIRFEIQSSEKTLEEKDIASIMDKILESLIENYKVRLR 789 Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/213 (34%), Positives = 111/213 (52%), Gaps = 19/213 (8%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-L 58 MKF S L L D+S ++I TL IGLEVE A + K++ +++PD Sbjct: 1 MKFNRSILNKILPLEDISSDEIYKTLNKIGLEVESFQKLCAPKKVVVGKIIECKKHPDAT 60 Query: 59 DCAILRIDTGKHQE----IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRK--IRGI 112 + ++ G +E Q+VCGAPN R G+ A G+ +P+ + ++K +R + Sbjct: 61 KLNVCQVAVGGSEENYEMRQIVCGAPNAREGIFVAVALEGAVLPQ----ITIKKAVLREV 116 Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPV---GGRLSDYLELSDPIIDVSLTPNRSDCI 169 ES GM+CS EL + I+EL V G L +Y +D I ++S+TPNR DC+ Sbjct: 117 ESCGMLCSTTELGFPAINDGIVELDESIGVLEIGKELLEYSYFNDEIYEISITPNRGDCM 176 Query: 170 GVRGIALDL-VAAGLGKLKEINISCPLSSESIP 201 + GIA DL VA G LK + P++ E+ P Sbjct: 177 SLLGIARDLSVAFG---LKRKPLEKPMALENAP 206 >gi|291320005|ref|YP_003515263.1| phenylalanyl tRNA synthetase [Mycoplasma agalactiae] gi|290752334|emb|CBH40305.1| Phenylalanyl tRNA synthetase beta chain (PheT) [Mycoplasma agalactiae] Length = 726 Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 149/599 (24%), Positives = 272/599 (45%), Gaps = 77/599 (12%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN---PDLDCAILRIDT 67 ++ D S+EK ++ ++G EVE + + VL V +N +L+ ++ + Sbjct: 14 EINLDSSIEK---SINNLGYEVESIKQFSDVKGIKFGYVLDVFKNENSKNLNVVSIKTNR 70 Query: 68 GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS 127 G I + A NV+ V G+ E ++ +++ G+ S GM+ S EL Sbjct: 71 GI---ITIQTTATNVKKNHWIVAFVEGASKGE--IVFGKKEMAGVVSNGMLASYSELGY- 124 Query: 128 DDSASIMELPIDAPVGGRLSD------------YLELSDPIIDVSLTPNRSDCIGVRGIA 175 DS+ LP D P G L D Y L D IID++ NR++ +A Sbjct: 125 -DSSL---LPFD-PNGVILLDDSSINEDLDPIKYFNLDDYIIDITTPANRAETNSYYVLA 179 Query: 176 LDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAP---- 231 ++L A K N+ P + IK ++++ F ++NN Sbjct: 180 MELAAYYKTKFVWPNL-LPKDNYRFRSNIKVSKNEATELTFFEA----RLKNNKTSLKDI 234 Query: 232 -NWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 + + A GL +I D+TN L G P HV+D ++I L+ + SGE + L Sbjct: 235 LFLAKHGINAKGLYAI----DLTNIALLVAGAPCHVYDKNKIGKSLSCSK-FSGE-LEIL 288 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 ++ +S D + I + + S+A ++G +++ D+NT +V+ EV L+DP+ + + + Sbjct: 289 GGKKVSVS-DVLAIKDETGVISLASVMGCENSAVDENTKEVVFEVGLFDPLLVRHGAREI 347 Query: 351 GIITDSRYRFERGVDLQ---GMIPVLKHIVSLILSLCGGTASDIC------IARNITYKP 401 + T S + R ++ Q I LK+ +L G + S I +++ Sbjct: 348 KMDTASSIQAGRALNSQIVFNGISFLKYKS----ALDGQSVSQIVNIPKVKKGKSVIQSR 403 Query: 402 RKI-VFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 +K+ ++ N +K LS D D L+++GFS+ DK V P++R D++ D++ Sbjct: 404 KKLSIYANCNIKDLSIFD----DVETTLKKIGFSM----DKNRVIAPTYRSDIQHYEDVI 455 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 EE R YG + K E L S + + + K +L S E+ +S IS E Sbjct: 456 EEYFRFYGYNNFKPEAPKLE--------SYKVAHSVDNKNILQSLGYNEIRTFSLISSEM 507 Query: 521 SVLF-GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 ++L + ++++ +S + +R S++P LL++ N+ R I + ++FE + +N Sbjct: 508 NILNPFNFESTVKLMTFVSKEREEVRNSIIPSLLESAEFNLKRKINNVSLFEHGMINDN 566 >gi|168705142|ref|ZP_02737419.1| phenylalanyl-tRNA synthetase, beta subunit [Gemmata obscuriglobus UQM 2246] Length = 405 Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 124/418 (29%), Positives = 200/418 (47%), Gaps = 47/418 (11%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEK-ADLVEEILRIY 467 ++RL G +P + R+L L F V GE D + V+ P R D++ ADLVEE+ R+Y Sbjct: 1 IERLLGFSIPPAEVARVLTALQFQVEPNGE-DAWVVTTPETRLDIQAGVADLVEELARVY 59 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQ-QSRTRYVKRVLASRAMMEVVNWSFISKE------- 519 G D + LPL E K N +L+ + R V+ +LA + + E + +S S + Sbjct: 60 GYDNLPERLLPLELPEPKGNRALELEDR---VRDLLADQGLNEAITYSLSSADAEAKLQP 116 Query: 520 ---QSVLFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 Q G G + +LNP+S + + MR LLPGLL+ +N++ A A++E+ V Sbjct: 117 AAPQPAAEGQAGSGFVALLNPLSPERAVMRRVLLPGLLQVAQKNLE-AADSVALYELGFV 175 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEG--SGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 Y P+ + + A RK + + G +G W D D +D K V+E Sbjct: 176 Y---LPKPGERLPAEPRKLAVVLCGRRTGAAWDDPQGVSPAKYDFYDLK----GVVEGLT 228 Query: 634 SLDSLRFESGAPS----WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN-PICGFE 688 + S AP+ W HP R+ ++ + V G FGE HP + + F L + E Sbjct: 229 GDLHIPGVSFAPTRDVPWLHPMRAAELRVNGAAV-GTFGELHPKVAEAFLLGERAVQVAE 287 Query: 689 VYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDV 747 + L+++ + R K S+ P KRD+A +V PA ++ I+ L+ D Sbjct: 288 LDLEAVLAAVPARYGYKP---FSTFPPAKRDVAVVVADATPAEAVLTEIRTAGGDLLTDA 344 Query: 748 TVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 ++FDV++G L EG KS+A + T+R D R L ++ + +K A L+ + Sbjct: 345 SLFDVYRGAGLPEGSKSLAFAL-------TYRAPD-RTLGEKEIAKAHEKVEARLKET 394 >gi|110004571|emb|CAK98908.1| hypothetical phenylalanyl-trna synthetase beta chain protein [Spiroplasma citri] Length = 798 Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 140/612 (22%), Positives = 262/612 (42%), Gaps = 58/612 (9%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL ++D TD+S I L S+G EVE+ N + S ++ V PD Sbjct: 1 MIITRRWLNKYIDFTDISNADIAAALNSLGFEVERTHNFDCNSNIVCGRIQVVNEIPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +DTG+ +VCGA N V A PG+ + I +I+ S GMMC Sbjct: 61 LKFCLVDTGQELVDPIVCGASNPAENGYVVVARPGAVLANGTKIAKC-EIKEYASEGMMC 119 Query: 120 S-------EKELMLSDDSASIM-----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 S EK L ++ I+ E+ D + + L+D + ++ LT NRSD Sbjct: 120 SLSELGIGEKYLTAAEQDEIILTFNEKEVSYDMIGAEDILTKIGLTDYLFEIDLTLNRSD 179 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 C+ +A +L +L + + + + +K + S++ ++ VK + Sbjct: 180 CLSAYELARELARYFKRELFPLELESTENLKEYQNPLKVVIATSAVESAISVNVVK-LTP 238 Query: 228 NVAPNWMRQR--LKAVGLRSISA--LVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 +P + R LK +S A D+ +L+ G P ++D ++I + L + Sbjct: 239 EKSPLKLSDRIWLKINEYQSNIADPFGDLAIKATLETGQPLLLYDFNKIKNPLKITD--- 295 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 +N+ +++ ++V+ + GI TT++ V + I + Sbjct: 296 -----DYENKTFNIKKGDLVVVEGNEFVELIGIRVNPAYAISATTTEITVLALHLNHIVM 350 Query: 344 ARSGKNLGIITDSRYRFER-------GVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 + + +GI + +R+ + G+ L + +LK G +++ + Sbjct: 351 RQQQRKVGISNINLHRYIKPLSYSTVGLGLSRYLYLLK---------INGFLAELSVLNF 401 Query: 397 I-----TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 I T +P I + E+ + G + + +LE L F E ++ V+ P R Sbjct: 402 IKEYKKTVEPISITLL--EINQFIGHSFTLLEIKALLEPLAFQFKEEGEQLFVTPPVTRT 459 Query: 452 DVEEKADLVEEILRIYGVDQIKSEP--LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 D+ +K DL+EEI+R++G + I ++P LP V+ KR + + + + + Sbjct: 460 DIFQKVDLIEEIVRLFGYNNIIAKPPVLP-NLVKAKRP---AEKTIKNFETFFLNNGFYQ 515 Query: 510 VVNWSFISKEQ--SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 ++ + +E+ + F Q+ ++L+P+S + + MR SL LL + G N R + Sbjct: 516 AKTYALVKQEEITNFNFFNYQKPYQLLSPLSEEHAVMRLSLTNSLLNSVGYNNARNQKNV 575 Query: 568 AIFEVSHVYEND 579 +F V +Y N+ Sbjct: 576 KLFTVEKIYANE 587 >gi|218671070|ref|ZP_03520741.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli GR56] Length = 109 Score = 122 bits (307), Expect = 2e-25, Method: Composition-based stats. Identities = 55/99 (55%), Positives = 73/99 (73%), Gaps = 1/99 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICTRLTEIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 +L +DTG +QVVCGAPN R GL+G +A PG+ +P Sbjct: 61 LKVLMVDTGTGAPVQVVCGAPNARAGLVGAFAAPGTYVP 99 >gi|331007939|ref|ZP_08331001.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] gi|330418252|gb|EGG92856.1| Phenylalanyl-tRNA synthetase beta chain [gamma proteobacterium IMCC1989] Length = 294 Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 95/310 (30%), Positives = 148/310 (47%), Gaps = 27/310 (8%) Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 +R E + +SF+ E LF + NPISADM+ MRTSL PGL++A N++R Sbjct: 2 ARDYQEAICYSFVDPELQQLFSPELSPAALQNPISADMAVMRTSLWPGLVQALKHNINRQ 61 Query: 564 IADFAIFEVSHVYENDTPEG------QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 + +FE + ++ +G Q+ + AG+ GS E WS +++ VD Sbjct: 62 QSRVRLFETGLRFMPNSEQGGVAGLQQQPVLAGLIYGSRDHES----WSSNTDK----VD 113 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGA---PSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 +D K D S+ +S + +F A P+ HPG++ I V+G G HP + Sbjct: 114 FYDIKGDIESLFT--MSGQAAKFTMTAVDHPAL-HPGQAASISYKGH-VIGMVGAMHPQL 169 Query: 675 LDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTL- 733 +S P+ FE+ D+I LS V+RDLA IVDQ + L Sbjct: 170 QKKLDISQPVYLFEIMQDAI-----MEVSLPSFTPLSRFPEVRRDLAVIVDQEVTVADLQ 224 Query: 734 VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 ++ D + + VFDV+ GK + +KSVA+ + Q L T D +I +D++V+ Sbjct: 225 TKALEVTDETLIKLKVFDVYIGKGIDSHRKSVALGLTFQHLSRTLTDCEINTSVDKVVDA 284 Query: 794 VVKKTNAVLR 803 + NA LR Sbjct: 285 LKVTFNAELR 294 >gi|149191096|ref|ZP_01869356.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio shilonii AK1] gi|148835124|gb|EDL52101.1| phenylalanyl-tRNA synthetase beta subunit [Vibrio shilonii AK1] Length = 320 Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 95/313 (30%), Positives = 146/313 (46%), Gaps = 19/313 (6%) Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 + V+ +L R E + +SF+ EQ L L + PISA+MS MR L+ GLL Sbjct: 21 KRVRNLLVDRGYQEAITYSFVEPEQQKLIVPDVEPLVLPFPISAEMSAMRLGLIQGLLNT 80 Query: 556 TGRNVDRAIADFAIFEVSHVY-ENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 N R +FE + +T E Q+ M AG+ G+ S W ++ Sbjct: 81 VVHNQKRQQPRVRLFEYGLRFIPCETAENGMRQEPMLAGVIAGTR----SEEHWDIETNT 136 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 VD FD K D +++E + + F + HPG+S I + V G G H Sbjct: 137 ----VDFFDLKGDLEAILELSANEKAYSFAAAKHPALHPGQSAAIVVDGKEV-GVIGTVH 191 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P + FGL+ FE+ +I + V LS +RD+A +VD+ + +G Sbjct: 192 PELERKFGLNGRTIVFEIEWSAI-----NSKVIPEAVQLSKFPSNRRDIAVVVDEAVASG 246 Query: 732 TLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 +V ++ + D +FDV+ GK + EGKKS+AI + +Q ++ T D DI +D I Sbjct: 247 DIVAACLEQGGEFLKDAKLFDVYVGKGVEEGKKSLAIALTLQSVERTLEDADIAGAVDTI 306 Query: 791 VENVVKKTNAVLR 803 V +V +K A LR Sbjct: 307 VAHVSEKFGASLR 319 >gi|325276807|ref|ZP_08142508.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] gi|324098045|gb|EGB96190.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas sp. TJI-51] Length = 221 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 67/181 (37%), Positives = 106/181 (58%), Gaps = 2/181 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+ ++ VS +++ L+ GLEV+ V S + ++L+ E++PD D Sbjct: 1 MKFSEQWLRGWVNPQVSRDELVARLSMAGLEVDSVTPAAGQFSGIVVGEILATEQHPDAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + T + QVVCGAPN R G+ +A G+ + + + K+RG+ES GM+C Sbjct: 61 KLRVCQVTNGQETFQVVCGAPNARPGIKVPFAMIGAEL-SGDFKIKKAKLRGVESFGMLC 119 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL +S+++ ++EL DAPVG + YL L D I++ LTPNR DC+ + G+A D+ Sbjct: 120 SAAELEISEENDGLLELAADAPVGENIRTYLSLDDASIEIGLTPNRGDCLSIAGLARDVS 179 Query: 180 A 180 A Sbjct: 180 A 180 >gi|293364121|ref|ZP_06610855.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma alligatoris A21JP2] gi|292552322|gb|EFF41098.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma alligatoris A21JP2] Length = 687 Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 136/512 (26%), Positives = 228/512 (44%), Gaps = 53/512 (10%) Query: 96 CIPEN----NMIVNVRKIRGIESTGMMCSEKELMLSDD-----SASIMELPID-APVGGR 145 C EN ++I +K++ I S GM S +EL + D IM L D A + Sbjct: 51 CFVENSRMKDLIFKEKKLKNIISQGMFASFEELGFNKDLFGNKGQHIMRLKPDFAKLSQD 110 Query: 146 LSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK 205 + L L D IIDVS T NR+D +A +L A E + S S+ + Sbjct: 111 PMEVLGLDDLIIDVSTTANRNDANSYLILAKELAAYYQT---EFDYSEKSHKGSLFSNLS 167 Query: 206 FDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGL-RSISALVDITNYVSLDRGYPS 264 D S+ F C + + + L G+ + S V++TN L G P+ Sbjct: 168 IDKGISAELSMFESYCDREFDIDFLDKLL---LAKHGIDTNFSWAVNLTNLNLLITGAPT 224 Query: 265 HVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGC 324 HV+D S+I +T + K+ L N+E +++ VV +G I SIA ++G +++ Sbjct: 225 HVYDKSKIGKKITT--SLYSGKLNILGNKEIEVNKVLVVNDENGPI-SIASVMGLENSKV 281 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 D T + L E+ + P I S K + +++ S + R V +Q + LK + + L Sbjct: 282 DHETKEFLFEIGNFKPSLIRHSSKEIKLLSSSANQASRYVSVQILEEGLKFLRNY---LS 338 Query: 385 GGTASDICIARNITYKPRKIV------------FMNSEVKRLSGIDVPIEDSLRILERLG 432 S I + P+K++ F N +K+ ++ L LG Sbjct: 339 DAKVSFSNILNSPKNSPKKMIKFSKEKLLLYSNFTNHGLKKF-------HKAIEQLTCLG 391 Query: 433 FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 F D EV P +R D+++ D++EEI R Y D EP +T NLS++ Sbjct: 392 FDFDLVND--EVFAPLYRYDIDKFEDIIEEIFRFYSYDNF--EPAAIT------NLSIKT 441 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVL-FGGGQRELEILNPISADMSNMRTSLLPG 551 + +K + + EV ++ +S+E++ L + +L+++ +S + +R SL+P Sbjct: 442 QKRSLLKEFMQANGYNEVRTYTLLSEEKNYLNVFDFKEKLKLITFVSKEREVIRNSLIPS 501 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 LL+ N R I++ IFE+ V +N T G Sbjct: 502 LLEVVEYNQKRKISNINIFEIGMVNDNLTLMG 533 >gi|240047634|ref|YP_002961022.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma conjunctivae HRC/581] gi|239985206|emb|CAT05219.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma conjunctivae] Length = 720 Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 175/690 (25%), Positives = 283/690 (41%), Gaps = 90/690 (13%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M F+L+ LK +L T ++ EKI + +G EVE +S KVL V NPD Sbjct: 1 MIFSLTRLKKLANLQT-IADEKIFQAINDLGFEVESTKKLNQVSGIKFGKVLQVYPNPDA 59 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C I+ D K + IQ A NV G + PGS ++ +K++ I S Sbjct: 60 DNLQVCKIIFND--KERIIQ--TRAKNVVAGKYIMAFVPGS--KSGDITFAAKKMQNIVS 113 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+ S EL ++ I + + D EL D ++D+ + NRSD Sbjct: 114 EGMLVSLNELGFDENLIPHELQGGIFVFDEEVDLNSDPLDIFELDDYLVDIKILTNRSDA 173 Query: 169 IGVRGIALDLVAAGLGKLKEINISCP-LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +A +L AA G+ S P + ++KF LD++ G V + Sbjct: 174 NSYLIMANEL-AAYFGQ----KYSLPDFKTSGFISDVKF-LDNNY---GKLSGVEAKVVD 224 Query: 228 NVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKI 287 N+ N + LK+ G++ + VD+TN+V L G P HV++ S I +L + I Sbjct: 225 NLKINDLLLILKS-GIKIFYSPVDLTNFVLLYSGQPCHVYNKSDIQGMLKLELVNQKANI 283 Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 N+ D+ + + D + S AGIIG + N D++ E+A +D I +S Sbjct: 284 FG--NKAVDVISA-LAVRDDHKTLSFAGIIGIEELKVTTN-KDLVFEIANFDSSLIRQSM 339 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--KPRKIV 405 K L I S + + + QG +L HIV +I N Y + + I Sbjct: 340 KELKIQNQSANQSSKNLS-QGS-QLLAHIV------LNNYIKEISQPINFEYLHQEKLIN 391 Query: 406 FMNSEVKRLSGIDVP---IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 F ++++ G + + S+ ++ LGF E P +R DV DLVEE Sbjct: 392 FSKTKLEEFIGHKLDEKRYQQSITNMQILGFVYKNE----AFIPPFYRYDVNIFEDLVEE 447 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 +R YG + I S +N + Q +++ V + E+ ++ K + Sbjct: 448 FMRFYGYNNITSYLQAQKPFIVNKNDFISQLKSQIV-----ALGFAEINTFTLTDKNSNE 502 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 + ++ +S D+ +R SL A N R I+ + FE++ + E E Sbjct: 503 FNPFDLQTTQLATFLSQDLIQIRHSLAISASAALIYNQKRKISSLSFFEIAMISE----E 558 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q + A D FD K L++ + LR Sbjct: 559 QQSLVLASTE-----------------------FDFFDIKNILLNIFN--LEFKFLR--- 590 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 A + HPG+S +I ++V G+ G+ HP Sbjct: 591 -AQKYLHPGKSALIYIDKQLV-GWIGQPHP 618 >gi|167860619|gb|ACA05089.1| phenylalanyl-tRNA synthetase beta subunit [Flammeovirga yaeyamensis] Length = 256 Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 12/240 (5%) Query: 38 REALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC 96 + L + +VL+ E++P+ D + +D G + +Q+VCGAPNV G + A G+ Sbjct: 19 KGGLKGLVVAEVLTCEQHPNADKLRVTTVDIGAEEPVQIVCGAPNVAAGQKVIVATIGTE 78 Query: 97 I---PENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL- 152 + P + + KIRG S GM+C+E E+ + IM L D G + Y L Sbjct: 79 LYPSPTESFKIKKGKIRGEVSMGMICAEDEIGMGQSHDGIMVLDTDMANGTPAAKYFNLE 138 Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINI-----SCPLSSESIPLEIKFD 207 +D ++++ LTPNR D G A DL ++++ S + + S P+++ + Sbjct: 139 NDNVLEIGLTPNRVDGSSHYGAARDLKVLLDRPIQQVAKPELLDSFKVDNTSAPVQV--N 196 Query: 208 LDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVF 267 + DS C ++ + G+ +P W++QRL A+GL I+ +VDITNYV + G P H F Sbjct: 197 VQDSDACPRYSGITISGIEIKESPKWIKQRLTAIGLSPINNVVDITNYVLHELGQPLHAF 256 >gi|222874783|gb|EEF11914.1| predicted protein [Populus trichocarpa] Length = 327 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 101/340 (29%), Positives = 164/340 (48%), Gaps = 37/340 (10%) Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR 486 +LERLG V D VSVP+ RQD+ ADL EE+ R+YG D + S L + + Sbjct: 11 LLERLGLEVELSADALTVSVPTRRQDLMIPADLAEEVARLYGYDALTSS---LPREASRG 67 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ--RELEILNPISADMSNM 544 L + R ++++L + + + +S S+++++ F Q +++ PIS S + Sbjct: 68 FLPKRNQHRRKMRQLLQGAGLSQAITYSLTSEQRAMQFNEQQDLHPVKLAMPISEARSTL 127 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN-----DTPEGQKYMAAGIRKGSSGIE 599 RTSL+PGLL+ NV R AD A +E+ VY +T ++ M AGI G+ Sbjct: 128 RTSLIPGLLEVAQHNVARQHADLAYYELGSVYLQRDASLETLPLEQEMLAGI---MVGLA 184 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGRSGIIKT 658 R+ + D F K ++ E +LD L +E+ A HPGR+ I Sbjct: 185 EQHRVHGTHVK-----TDFFVIKGIVETLAE---ALDVPLTYEAAAMQSMHPGRTARILL 236 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGF-EVY---LDSIPISQKKRTKTKKVVHLSSLH 714 E + G+ G+ HP GLS G EVY LD++ + K +++ S+ Sbjct: 237 DGEAI-GFVGQVHP------GLSKEEYGLKEVYVFELDAMALHSKVARVYQEISRFPSM- 288 Query: 715 PVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVF 753 RD+A ++D+ + A + +I + L+ V +FDV+ Sbjct: 289 --TRDVAIVLDRSVSASEVEAVIMQAAGPLLKQVELFDVY 326 >gi|213621967|ref|ZP_03374750.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 183 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/180 (35%), Positives = 112/180 (62%), Gaps = 3/180 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 >gi|213421524|ref|ZP_03354590.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 184 Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/181 (35%), Positives = 112/181 (61%), Gaps = 3/181 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + + +VCGAPN R GL A G+ +P + + K+RG S GM+ Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP-GDFKIKAAKLRGEPSEGML 119 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+DC+G+ G+A D+ Sbjct: 120 CSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRADCLGIIGVARDV 179 Query: 179 V 179 Sbjct: 180 A 180 >gi|256370587|ref|YP_003108412.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Sulcia muelleri SMDSEM] gi|256009379|gb|ACU52739.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Sulcia muelleri SMDSEM] Length = 675 Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 104/448 (23%), Positives = 206/448 (45%), Gaps = 29/448 (6%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAA----GL-GKLKEI-NISCPLSSESIPLE-IKF 206 D +I++++ PNR D + GIA DL A G K+K++ ++S + I + +K Sbjct: 47 DYLIELNIPPNRRDVMSHYGIARDLNIALKSRGFKSKMKDLPSVSLFKKDKKINFKNLKC 106 Query: 207 DLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV 266 ++ + C ++ + ++ +PNW++ L +G S + ++DI N++ + G P + Sbjct: 107 FIEKNKKCIRYSYTTLSNIKVLDSPNWLKNYLNNIGCISTNNILDIENFILYELGKPIRI 166 Query: 267 FDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCD 325 +D +I + L+++ + S +++++ ++ IAG++ + + Sbjct: 167 YDLDKIKNFSLSLKESPKKFLFNKKFFS----SKNDLILFNEKNPICIAGLLVNNNFIVE 222 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 T ++ +E A + I + K I + RFERG+D I LK LI L G Sbjct: 223 KFTKNIFIESADYSAEYIYKIAKKYNIKNEFSIRFERGLDPNLNIYALKRAALLIKKLSG 282 Query: 386 GTASDICIARNITYKPRK------IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGE- 438 G S ++ + + P K + +++ + G ++ IL L V+ E Sbjct: 283 GKIS----SKIVDFYPEKPEKNIDLFIRFNKINNIIGYNLNFIKIKEILILLKIKVLKEN 338 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPLTQVEDKRNLSLQQSRT-- 495 ++ ++ +P +R+D+ + D++EEILRIYG + E + + KRN L++ + Sbjct: 339 FNGLKIKIPLYRKDITREIDVIEEILRIYGYNHFNCKEKIYFSCSCKKRNFLLKKEKMIE 398 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLK 554 + L S E++N S K+ S E + I N + + S +R +LL G+L+ Sbjct: 399 NMISNQLNSHGFYEILNSSLTEKKYSKYENNNFYEKIFIFNSKNKNFSFLRDNLLFGILE 458 Query: 555 ATGRNVDRAI--ADFAIFEVSHVYENDT 580 N ++ F ++ EN T Sbjct: 459 KISSNKNKFFEWGKKYFFYKKNILENKT 486 Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust. Identities = 21/44 (47%), Positives = 30/44 (68%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPF 44 MK + +WLK +LDT+VS++ IC LT IGL VE + + L+ F Sbjct: 1 MKISFNWLKLYLDTEVSIKFICKILTDIGLLVENLKKIKNLNSF 44 >gi|256005976|ref|ZP_05430917.1| Phenylalanine--tRNA ligase [Clostridium thermocellum DSM 2360] gi|255990058|gb|EEU00199.1| Phenylalanine--tRNA ligase [Clostridium thermocellum DSM 2360] Length = 364 Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/395 (26%), Positives = 173/395 (43%), Gaps = 52/395 (13%) Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR 486 IL L F V + + V VP++R DVE +AD+ EEI R YG + I++ L R Sbjct: 4 ILRALEFEV--DENNMTVKVPTFRDDVEREADIAEEIARFYGYNNIEATLLSGKTATQGR 61 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGGQRELE----ILNPISADM 541 + +Q+ +K + + + E +SF S K L EL I NP+ D Sbjct: 62 K-TYKQTIEDLIKETMIACGLCETYTFSFTSPKVFDKLNLPADSELRKAVVISNPLGEDY 120 Query: 542 SNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGS 595 S MRT+ +P +L N +R I + +FE+S VY + PE + + G+ Sbjct: 121 SIMRTTTIPDMLAVISTNYNRRIEEARLFEMSKVYIPKSLPLEELPEEKTVLTLGM---- 176 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW----YHPG 651 G L D +D K V+E + ++ +P +HPG Sbjct: 177 -----YGEL------------DFYDLKG----VVEELLERLGIKNYDVSPEKNNVVFHPG 215 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH-- 709 R+ +I E G GE HP + + F C Y+ I + R + + Sbjct: 216 RTALINIDGEYA-GIIGEIHPEVAEKFE-----CPERTYIGVIEVETLVRKASMDCQYKG 269 Query: 710 LSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQ 768 L V RD+A +V + + +IIK ++++ V +FDV++GK + EG KSVA Sbjct: 270 LPKYPAVTRDIAMLVKDEVMVKEIEDIIKQRAGKILESVKLFDVYKGKQVPEGMKSVAYS 329 Query: 769 VLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + + T D+++ M +I++ + + A LR Sbjct: 330 ITFRASDRTLTDEEVGKAMTKILDGLKRNLGAELR 364 >gi|330902658|gb|EGH33673.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 222 Score = 113 bits (282), Expect = 2e-22, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 118/220 (53%), Gaps = 15/220 (6%) Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR--KIVFMN 408 G+ TD+ +R+ERGVD Q ++ L+L + GG A + + + P + Sbjct: 3 GLHTDASHRYERGVDWQLAREAMERATGLLLEITGGEAGPVIEVVSEQHLPSIAPVTLRA 62 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIY 467 S V+++ G+ + + R+L LG +V E D ++ V VPS R D+ + DL+EE+ R+Y Sbjct: 63 SRVEQMLGLVIENAEIERLLTGLGLAVTAEADGQWRVEVPSHRFDISLEVDLIEELARLY 122 Query: 468 GVDQI-----KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 G +++ ++ P + E K +L ++R+L +R E + +SFI + Sbjct: 123 GYNRLPVRYPQARLAPQAKAEAKGDLP-------ELRRLLVARGYQEAITYSFIDPKWFE 175 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 LF G + L + NPIS DM+ MR SL PGL+KA N++R Sbjct: 176 LFSPGAKPLLLANPISNDMAAMRASLWPGLVKALQHNLNR 215 >gi|83319488|ref|YP_424364.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|93140701|sp|Q2SS99|SYFB_MYCCT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|83283374|gb|ABC01306.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 794 Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 186/859 (21%), Positives = 351/859 (40%), Gaps = 121/859 (14%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREAL-SPFTIVKVLSVERNPDL 58 M T +WLK +L+ D +S ++I L S+G EV+ V + +L S + V ++ PD Sbjct: 1 MIITRNWLKKYLNLDNISNDQINVALNSLGFEVDNVYDLNSLNSELVLGYVEQSKQIPDT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +Q+VCGA NV V + AP + I N + + +KI+ ES GM+ Sbjct: 61 HLKLNKVNIGT-KSLQIVCGASNVDVNQFVIVAPINATIA-NGLTLTSKKIQNYESQGMI 118 Query: 119 CSEKELMLS------DDSASIME-----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 C+ E+ ++ +D I L + +G + + L D + ++ LT NRSD Sbjct: 119 CALNEIGINQSVINKEDQLKIYNVFDKNLDLKKYLGKDVKQIIGLDDYLFEIDLTLNRSD 178 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK--------FDLDDSSLCKGFAM 219 C+ A LKE+ + LEIK F +D L + Sbjct: 179 CL-----------ASFQILKEL-------ANYFDLEIKNYDNKFNDFKENDLDLKITISK 220 Query: 220 CCVKGVR----NNVAPNWMRQRLKAV-----GLRSISALVDITNYVSLDRGYPSHVFDAS 270 + ++ +N N +L ++ L IS+ ++ N +SL + Sbjct: 221 KIEEQIKTISYSNFVLNNHLNKLDSIDDIFLKLNQISSTNNLINDLSL-----LSTLSTA 275 Query: 271 RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 + ++ + + S L L N + + + SD +I +I G+ D+N+ + Sbjct: 276 QTHILIDLDKLKSFNLKLELINHN---DKELLCLTSDNQIVNIIGLQTESKFSIDNNSKN 332 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASD 390 VL + +P N+ R + L + S +R + + + P L + +L L+ + + Sbjct: 333 VLNIMVNIEP-NLMRKQQKL--LNTSNINLQRYI--KPINPNLFDLANLNLTSLLNSYNL 387 Query: 391 ICIARNI-----TYKPR-----KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD 440 + A + TYK + KI SE+ L G ++ I+ + ++L F + + D Sbjct: 388 VNKAYKVKVLKQTYKNKTEFEIKI----SEINDLLGTNLTIDQIKSLFKKLDFKITNKND 443 Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYV 498 ++ R D+ K DL EE+ R+Y D I+ L T + +NL+ L+ T Y+ Sbjct: 444 LLTFNIDPNRIDISSKNDLCEEVARLYSYDNIQEVALSFTSFKKPKNLNLKLENKLTNYL 503 Query: 499 -------KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 + + ++ +W+ LF + +L+P+S RTSL Sbjct: 504 IGLGFNNTKTYSLTTQIDAKHWN--------LFNISDF-INLLSPLSNLRQTYRTSLSKS 554 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA-----AGIRKGSSGIEGSGRLWS 606 L+ N + +FE++ +Y N Q+++ + G + + Sbjct: 555 LIDTAIYNHSINNKELKLFEIADIY-NLNQLKQRHLVFLTSHHIYKNGLTHQLVENNFYY 613 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 +K F DL++ + + + + A +Y ++G+ Sbjct: 614 NKEILESIF-DLYNLDFSQIKYVNNLDVIKEIHLYINATIYYQKQ-----------LVGF 661 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAF-IVD 725 + +P F N + V ++ + + + KT + LS RDL I + Sbjct: 662 IYQLNPK----FESENKLNKTFVCEINLDVLNELKNKTIEAKTLSKFQSSSRDLTIEISN 717 Query: 726 QHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGK-KSVAIQVLIQPLKDTFRDDDIR 784 I L+ I +V + I V D++ L + K++ IQ + L + +I Sbjct: 718 DLIYQDVLLKAISDV-KYITSSKVVDLYLDDKLAKNNTKALTIQFIFNDLDHQLTEAEIN 776 Query: 785 ILMDRIVENVVKKTNAVLR 803 ++I+ N VKK V+R Sbjct: 777 TEFEKIISN-VKKMKVVIR 794 >gi|47459351|ref|YP_016213.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma mobile 163K] gi|81614142|sp|Q6KHC8|SYFB_MYCMO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|47458681|gb|AAT28002.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma mobile 163K] Length = 713 Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 182/842 (21%), Positives = 344/842 (40%), Gaps = 181/842 (21%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+ LK + ++S E + IG EVE+ + KVL + +N + D Sbjct: 1 MIFSYKHLKKLANLNEISFEDVIKAFNLIGFEVEETKEIRHVENIKYGKVLKIYKNENSD 60 Query: 60 ----CAILRIDTGKHQEIQVV-CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 C I D +I+++ A NV + + PGS + N ++ + ++GI S Sbjct: 61 NLTVCEIQFKD-----KIRIIQTTAKNVEINKYVMAFIPGSKLANN--LIESKLLKGIIS 113 Query: 115 TGMMCSEKELM----------LSD-----DSASIMELPIDAPVGGRLSDYLELSDPIIDV 159 GM+ E++ LS D A++ E PI LEL D +ID+ Sbjct: 114 EGMLVGFDEMLGFEIKLVPKELSKNVIVLDEANLNEDPIAN---------LELHDYLIDL 164 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAM 219 ++ PNRSD I +A +L AA G K D D + Sbjct: 165 AILPNRSDAISYLVMAKEL-AAFFG-------------------TKIDND---------L 195 Query: 220 CCVKGVR-----NNVAPNWMRQR-----------LKAVGLRSISALVDITNYVSLDRGYP 263 C+K +R +N+ +++ + L L+ + D+ N + + G P Sbjct: 196 ICLKNLRVSKINSNLEGIFVKSKTLELKLYDKYLLLKSHLKLTNTYKDLENLILIHTGMP 255 Query: 264 SHVFDASRISDVLTVRRACSGE---KILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 H + + V V ++ S E + L +DN N+VI I +I + K Sbjct: 256 IHFLNLKSLEKVNIVSKSSSLEIANRTLKIDN--------NLVIEKSREIIAIPYLETQK 307 Query: 321 HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI 380 D+ + + + + P + ++ K L + + + + + + ++++ SL Sbjct: 308 EFEIKDSQKEFFIFMNILSPKEVRKTIKTLKLESSQIKQATKTISHGMQLNAIQYMQSLF 367 Query: 381 LSLCGGTASDICIAR-NITYKPRKIVFMNSEVKRLSGIDVPIEDSL----RILERLGFSV 435 +I I N+ KP++I+F ++ + R++G ++ E + LE LGF Sbjct: 368 --------EEIEIVNINLNLKPKEILFDHTFINRIAGFEIVKEQKFINAKKSLEILGFKF 419 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 + ++ VP++R D D++EE+ R YG D P+ Q E K + + Sbjct: 420 FED----KILVPAYRHDYTGPYDVIEELFRFYGYDN-----FPILQPEIK---PFKIQKK 467 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 K LAS+ E+ +S ++KE + + D N +T +L + Sbjct: 468 YDFKFSLASKNYNEIKTYSLVAKEDN----------------NFDPFNFKTEILMKTFPS 511 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG-IRKGSSGIEGSGRLWSDKSEERCR 614 R + R F++ E++ E + G I +G + + ++KS + Sbjct: 512 EKRRIIRNSQAFSLLEIAEYNIKRKLEKINFFDFGMINEGKRALIFAS---NEKSFNEIK 568 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 DLF SL S +FE ++ HP S I +++ G+ G+ +P Sbjct: 569 -KDLF--------------SLFSYKFELRKTKNNYLHPNASAHIFYENKLI-GWMGKINP 612 Query: 673 NILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK-RDLAFIVDQHIPAG 731 ++ +S+ I E+ LD IS+ + + + P+K RD+ F ++++ Sbjct: 613 SL----KISDLIF-VEILLDEFNISKNQFKEY-------NFDPLKFRDITFSIEKNQSID 660 Query: 732 TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 T + +K + + +V + D F+ K ++ +++L++ DD I+ L + I+ Sbjct: 661 TYLKELKKIKNIF-EVQIIDKFEKNE----KLNITVRILLE-------DDAIKNLDEAIL 708 Query: 792 EN 793 +N Sbjct: 709 KN 710 >gi|269101015|ref|YP_003289163.1| phenylalanyl tRNA synthetase beta subunit [Ectocarpus siliculosus] gi|266631523|emb|CAV31194.1| phenylalanyl tRNA synthetase beta subunit [Ectocarpus siliculosus] gi|270118653|emb|CAT18704.1| phenylalanyl tRNA synthetase beta subunit [Ectocarpus siliculosus] Length = 780 Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 146/602 (24%), Positives = 269/602 (44%), Gaps = 83/602 (13%) Query: 230 APNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-----G 284 +P W+++RL +G ++ ++D NY+ L+ G +D + +++T G Sbjct: 193 SPYWIKKRLSLMGFNPVNNIIDTVNYLMLETGQVFFAYDLGILENIMTTTNLAFITKYVG 252 Query: 285 EKILALDNQEYDLSPDN--VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 +K L ++ ++ N +V+ + +I SI G I + + NT+ VL++ L+D + Sbjct: 253 DKSLFHISESKTITLKNNILVLTLNNKIISIPGFIQDYNTIVNKNTSSVLLQYGLYDSKS 312 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY--- 399 I +S K L + TD + E+ DL + ++ L + S+ I Y Sbjct: 313 IKKSSKILNLKTDYSIKSEKQTDLNLLEQSYLRLMHLFWAQDIKFESEKINKSKIEYLKN 372 Query: 400 -------------KPRKIVFMNSEVKRLSGIDVPIEDS-----LRILERLGFSVIGEYDK 441 K KI + N +K+L+G + +R L+ L F + + DK Sbjct: 373 HFSLFYRYIKQSDKRIKISYQN--IKKLTGPYNSFNNLSDFQIIRNLKLLNFKIYLQTDK 430 Query: 442 --FEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 F V VP R+ D+E + D++EEI+R+ G ++ K PL +T ++ Y+ Sbjct: 431 NCF-VLVPLARKIDLEREVDIIEEIVRVIGFNKFK--PLAITN-----------NQFGYL 476 Query: 499 KRV--LASRAMMEVVNWSFISKEQSVLFGGGQR-ELEILNPISADMSNMRTSLLPGLLKA 555 ++ L R +N F S+L + E+ + NP+ + S +R SLL G+++ Sbjct: 477 TKIEKLKRRLREYFLNLGFNESIHSILMKKEYKNEISLKNPLFNESSVLRLSLLKGIIEK 536 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 N +F FE VY N G K I SG+ G G+++ + Sbjct: 537 VKFNQKNIGENFEAFESGRVY-NLLGSGHKKEIEVI----SGVFG-GKIFHSAWGNKNSS 590 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSW---------YHPGRSGIIKTSAEIVLGY 666 ++ F+AK VIE + +L + SW +HP + + LG Sbjct: 591 INWFEAKG----VIETLMEKLNLPL---SISWSPANNCGINFHPNLTTNFFIENQ-KLGV 642 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR-TKTKKVVHLS--SLHPVKR-DLAF 722 FG+ HP + L N I ++YL I R +++K ++H S S +P+ DL+F Sbjct: 643 FGQIHPTL----ALKNNIQK-KIYLFEINTGILNRFSESKNLIHYSNYSSYPISYIDLSF 697 Query: 723 IVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDD 781 I+++ I + + II + + L+ + +FD + K + EG S++ ++ Q T ++ Sbjct: 698 IINKSIFSYDIKEIISQLAQPLLKSLRLFDYYSKKPIKEGYCSLSFKLKFQSEIRTLSNE 757 Query: 782 DI 783 ++ Sbjct: 758 EV 759 >gi|42561125|ref|NP_975576.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|81400557|sp|Q6MT18|SYFB_MYCMS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|42492622|emb|CAE77218.1| phenylalanine-tRNA ligase beta subunit [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|301321153|gb|ADK69796.1| phenylalanine--tRNA ligase, beta subunit [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 794 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 180/847 (21%), Positives = 353/847 (41%), Gaps = 97/847 (11%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN-PDL 58 M T +WLK +L+ D +S ++I L S+G EV+ V + +L+ I+ + + PD Sbjct: 1 MIITRNWLKKYLNLDNISNDQINMALNSLGFEVDSVYDLNSLNSELILGYVEQSKQIPDT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +Q+VCGA NV V AP + I N + + +KI+ ES GM+ Sbjct: 61 HLKLNQVNIGT-KSLQIVCGASNVDANQFVVIAPINATIA-NGLTLTSKKIQNYESQGMI 118 Query: 119 CS-----------EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 C+ KE L + S L + +G + + L D + ++ LT NRSD Sbjct: 119 CALNEIGIDLSVINKEDQLKIYNVSDKNLDLKKYIGSDVKQIIGLDDYLFEIDLTLNRSD 178 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDSSLCKGFAMCCVKGVR 226 C+ I +L A LK N+ S + L++K DL + + + Sbjct: 179 CLASFQILKEL--ANYFDLKIKNLDNNFSDFKKNNLDLKIDLANQVKDQIKTISYSYFEL 236 Query: 227 NNVAPNWMRQRLKAVGLRSI-SALVDITN--YVSLDRGYPSHVFDASRISDVLTVRRACS 283 NN + + L I S+ ITN +S +H+ + D+ ++ + Sbjct: 237 NNKNDKLDSKDEIFLKLNQINSSNHSITNLSLISTLSTAQTHI-----LIDLDKLKSSNL 291 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + + DN+E + + ++ ++ +I G+ D+N+ +VL + +P N+ Sbjct: 292 KLEFINHDNKEL------LCLTNNNKLVNIIGLDTQNEFNVDNNSKNVLNIMLNIEP-NL 344 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI-----CIARNIT 398 R + L I+++ LQ I K I + +L T S++ I + Sbjct: 345 MRKQQKLLNISNTY--------LQRYI---KPINPNLFNLANQTFSNLLNDYQLINKAYE 393 Query: 399 YKPRKIVFMN--------SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 K K F N +E+ L G ++ I+ + + L F + + D + + R Sbjct: 394 VKILKQTFKNKQSLEIKLNEINDLLGTNLTIKQIKSLFKHLDFKITNKDDLLDFQIDQNR 453 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYV-------KRV 501 D+ K DL EE+ R+Y D+I PL T + +NL+ L+ T Y+ + Sbjct: 454 IDITSKNDLCEEVARLYSYDKIDEIPLSFTSFKKAKNLNLKLENKLTNYLIGLGFNNTKT 513 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + ++ E W+ LF + + +++P+S RT+L L+ N Sbjct: 514 YSLTSLNEAKYWN--------LFNISEF-INLVSPLSNLRQTYRTNLSKSLIDVAIFNHS 564 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + +FE++ +Y+ +++ S ++ + ++ + + Sbjct: 565 INNKELKLFEIADIYD----------LNNLKQRHLVFLTSNHIYKNSLNQQLIENNFYYN 614 Query: 622 KADALSVIEPF-VSLDSLRFES--GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 K ++ + + L ++++S HP + I +++ GY + +P Sbjct: 615 KEILENIFNLYNLDLSEIQYQSDLNLIKEIHPYINTTIYYQNQLI-GYLYKLNPKFESEN 673 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNII 737 L NP E+ LD + + + K LS RDL + + L N + Sbjct: 674 KL-NPTFVCEINLDILNQFKNSFIEAKT---LSKFQSSSRDLTIEISNDLTYQKVLFNAL 729 Query: 738 KNVDRLIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 +V + + + D++ +L K++ IQ + L+ +++I ++I++N +K Sbjct: 730 SDV-KYLKSHKIVDLYLDDNLIKNNTKALTIQFVFNDLEHQLTENEINQEFEKIIKN-IK 787 Query: 797 KTNAVLR 803 + V+R Sbjct: 788 QMKVVIR 794 >gi|289803473|ref|ZP_06534102.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 157 Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 K+RG S GM+CS EL +SDD + I+ELP DAP+G + +YL+L D I++S+TPNR+D Sbjct: 13 KLRGEPSEGMLCSFSELGISDDHSGIIELPADAPLGTDIREYLKLDDNTIEISVTPNRAD 72 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 C+G+ G+A D+ L+E ++ ++ S L I + D+ C + VKG+ Sbjct: 73 CLGIIGVARDVAVLNKAPLQEPEMAPVTATISDTLLITVEAVDA--CPRYLGRVVKGINV 130 Query: 228 NV-APNWMRQRLKAVGLRSISALVDIT 253 N P WM+++L+ G+RSI A+VD+T Sbjct: 131 NAPTPLWMKEKLRRCGIRSIDAVVDVT 157 >gi|330723794|gb|AEC46164.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma hyorhinis MCLD] Length = 728 Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 162/752 (21%), Positives = 314/752 (41%), Gaps = 106/752 (14%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M F+L LK +LD ++LE + + SIG E+E + ++ + +NP+ Sbjct: 1 MIFSLKKLKQLANLDKSITLEDVTKAINSIGFELESATKLNNIQGIKFGHIIELYKNPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C I D K + IQ A N++ + PG+ E +I ++++GI S Sbjct: 61 DNLTVCQIQFAD--KQRTIQ--TRATNLKQDDYVMAFVPGASSGE--VIFAAKELKGIIS 114 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD-------YLELSDPIIDVSLTPNRSD 167 GM+ S EL DS+ + + D + D Y +L D ++D+ + NR+D Sbjct: 115 EGMLVSLNELGF--DSSLVSKEVADGIFSFKKVDLNLDPLDYFDLDDYLLDIKILANRAD 172 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +A +L A ++S++I ++ K S + + F + G Sbjct: 173 ANSYLIMAKELAAY-----------FRINSQTIVIKNKPSFKSSFVFEDFLDNKLTGFEA 221 Query: 228 NVAPNWM-----RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 + ++ + L ++ ++ +VD++N + G P HV+D +++ V Sbjct: 222 KMDEDFELSIQDQLLLLKSSIKLVNPVVDLSNLTLIMTGQPVHVYDVDKLNSQKLVPAIK 281 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 S K L N+E ++S V+ + + + +IG + D N+ ++L E+ ++D Sbjct: 282 SQVKETVLGNKEVEISNALVICNENEEVLAFPAVIGLEKNAVDKNSKNILFEIGIFDTQQ 341 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 ++ K L I + R + L + L H + S + I +A T + Sbjct: 342 TRKTTKELKINNLTSNRAIKNFALGSL--DLAH--KFLKSYLNNFSFPINLA---TISKK 394 Query: 403 KIVFMNSEVKRLSGI----DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +I F ++K ++GI D ++ L L+ LGF ++ +V +P++R D+E D Sbjct: 395 EITFDLHKMKHIAGIEFYKDADFKNVLVSLKSLGFEF--DFPNKKVKIPTYRYDIELNED 452 Query: 459 LVEEILRIYGVDQIKSEP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 ++EE LR +G ++ EP LP +N + +K + + EV ++ +S Sbjct: 453 MLEEFLRFFGYTKL--EPTLP-------KNSVFKIQAFDVLKEQIRALGFTEVKTYTLVS 503 Query: 518 KEQSVL--FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + ++ F + ++ + +S + +R + + + N+ R I + FEV + Sbjct: 504 QLKNEFNPFNFTE-QINLSTFLSKERETIRNTQAISISEIVEYNLKRKIEAVSFFEVGMI 562 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 E + A + + + ++LF S+ FV Sbjct: 563 ----NSEINSLVLASTEFNFYQL-------------KQKLLNLF-------SLDFEFVRT 598 Query: 636 DSLRFESG-APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 DS +F +G + YH ++LG+ G+ HP + L+N E+ LD + Sbjct: 599 DSEQFHNGVSAKIYHNN----------VLLGWIGKPHPKL----KLANAFY-LEINLDKL 643 Query: 695 PISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 Q+ K K + RD+ F +D+ Sbjct: 644 ---QEFLVKNNKFQAYNINELKTRDITFTLDK 672 >gi|269114892|ref|YP_003302655.1| phenylalanyl-tRNA synthetase subunit beta (pheT) [Mycoplasma hominis] gi|268322517|emb|CAX37252.1| Phenylalanyl-tRNA synthetase beta chain (PheT) [Mycoplasma hominis ATCC 23114] Length = 724 Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 158/708 (22%), Positives = 297/708 (41%), Gaps = 106/708 (14%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRIDTGK 69 TD S+E++ + SIG EVE+ VL +NP+ D C + G Sbjct: 15 TDKSVEEVVGAINSIGFEVEEYHKFLDAEGMKFCHVLKAYKNPNSDRLTVCEV-EFGNGD 73 Query: 70 HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD 129 H IQ A N+ G + PGS +N I ++++GI S GM S E+ + ++ Sbjct: 74 HSIIQT--NATNMHEGDYVMAYVPGSRSGKN--IFAAKELKGIISEGMFVSLNEIGIPEE 129 Query: 130 SASIMELPIDAPVG----GRLS------DYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 P+D+ G G++ Y +L D +IDV++ NR+D + +A ++ Sbjct: 130 FH-----PLDSKDGIFQVGKIDLNLDPVQYFDLDDYLIDVTILSNRADALCYLILAKEIS 184 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGF-AMCCVKGVRNNV-APNWMRQR 237 A ++ PLS LE D + K A C V P Q Sbjct: 185 AYFESYVE------PLSKPKPTLE-----SDIVVSKNLVATNCFSLVEATTKQPTISLQD 233 Query: 238 ---LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQE 294 L G+++ VDITN V L G P HV++ + +S + S E + L N++ Sbjct: 234 EFLLWKHGIKTFRNAVDITNLVLLYAGVPCHVYNKNSLSSN-EFSTSLSNETLNVLGNKQ 292 Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 L+ +N+V+ + + SIA +IG ++ + + E+A + + RS K + + T Sbjct: 293 VTLN-NNLVVKNGDQTVSIASVIGLENYEYRPDGGHCVFELASFSLKEVRRSIKTVKLET 351 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE-VKR 413 + R + + ++ + + + + N + + + ++S + + Sbjct: 352 LASLRGSKEISCGQVVMAYEFLTKYL--------DQYSVQINAPKQRKTNILIDSHYITK 403 Query: 414 LSGIDVP-IEDSLRILERL---GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +G ++ + +++L +L GF + + D V P++R D++ D VEE+ R YG Sbjct: 404 YAGFNITKTKKYIQVLNQLTLLGFKI--KEDLSSVIFPTYRYDLKNMQDFVEEVFRFYGY 461 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 D ++ +T++ K N ++++ A + V ++ I+ E+++ F Sbjct: 462 DNFPAKSPKITRLLIKENKEF-----KFIENFCA-KGYFNVRTYTLINPEKNI-FNPFDF 514 Query: 530 ELEILNPISA---DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + N I+A D S +R S++ LL+ N+ + + + FE++ + K Sbjct: 515 KTN-FNAIAAKNYDHSQIRNSMISSLLEVLDTNIKQGLPAASYFEIAMI-------NNKM 566 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 GI + I+ D KAD S+ ++L F+ Sbjct: 567 NVLGIASLNKTID--------------------DIKADIYSITN-----ETLEFKPSKLK 601 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++P + I + E++ GY + P+ + N + EV+LD I Sbjct: 602 IFNPNAAQEIYLNNELI-GYVAKLDPHYCQY----NAVFS-EVFLDKI 643 >gi|313665278|ref|YP_004047149.1| phenylalanine--tRNA ligase, beta subunit [Mycoplasma leachii PG50] gi|312949564|gb|ADR24160.1| phenylalanine--tRNA ligase, beta subunit [Mycoplasma leachii PG50] Length = 794 Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 179/848 (21%), Positives = 346/848 (40%), Gaps = 99/848 (11%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVER---NP 56 M T +WLK +L+ D +S ++I L S+G EV+ V + +L+ I+ + + N Sbjct: 1 MIITRNWLKKYLNLDNISNDQINMALNSLGFEVDNVYDLNSLNSELILGYIEESKQILNT 60 Query: 57 DLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 L + I T + +Q+VCGA NV V V AP + I N + + +KI+ ES G Sbjct: 61 HLKLNKVNIGT---KSLQIVCGASNVDVDQFVVVAPINATIA-NGLTLTNKKIQNYESQG 116 Query: 117 MMCSEKELMLS------DDSASIM-----ELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 M+C+ E+ +S +D I +L + +G + + L D + +V LT NR Sbjct: 117 MICALNEIGISQSVINKEDQLKIYNLFDKKLDLKKYLGKDVKQIIGLDDYLFEVDLTLNR 176 Query: 166 SDCIGVRGIALDLVAAGLGKLKEI-NISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKG 224 SDC+ I +L ++K N ++ L+I + + + Sbjct: 177 SDCLASFQILKELANYFDLEIKNYDNKFNDFKENNLDLKITINKKIEEQIRTISYS---- 232 Query: 225 VRNNVAPNWMRQRLKAV-----GLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 N N +L ++ L IS+ ++ N +SL + A + D+ ++ Sbjct: 233 ---NFVLNNHLNKLDSIDDIFLKLNQISSTNNLINDLSLLSTLATA--QAHILIDLDKLK 287 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 +++ +++E+ + + SD +I +I G+ + D N+ +VL + + Sbjct: 288 NFNLKLELINHNDKEF------LCLTSDNQIVNIIGLQTESNFSIDSNSKNVLNIMLNIE 341 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 P N+ R + L + S +R + K I + L +++ + N+ Sbjct: 342 P-NLMRKQQKL--LNTSNINLQRYI---------KPINPNLFDLANSNLANLLSSYNLVN 389 Query: 400 KPRKI-----VFMN--------SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV 446 K K+ + N SE+ L G D+ I + ++L F + + D S+ Sbjct: 390 KAYKVKVLKQTYKNKTEFEIKISEINDLLGTDLTINQIKNLFKKLDFKINNKNDLLTFSI 449 Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYV------ 498 R D+ K DL EE+ R+Y D I+ L + +NLS L+ T Y+ Sbjct: 450 DPNRIDILSKNDLCEEVARLYSYDNIQEVALSFISFKKPKNLSLKLENKLTNYLIGLGFN 509 Query: 499 -KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 + + ++ +W+ LF + +L+P+S RTSL L+ Sbjct: 510 NTKTYSLTNQIDASHWN--------LFNISDF-INLLSPLSNLRQTYRTSLSKSLIDTAI 560 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 N + +FE++ +Y + + + + + + ++ + + Sbjct: 561 YNHSINNKELKLFEIADIYNLNQSKQRHLVFLTSHHIYKNVLNHQLIENNFYYNKEILEN 620 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 +FD S I+ +LD ++ HP + I +++ G+ + +P Sbjct: 621 IFDLYNLDFSQIKYVNNLDVIK-------EIHPYINASIYYQEQLI-GFIYQLNPK---- 668 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNI 736 F N + V ++ I K + + LS RDL + + L+ Sbjct: 669 FEAENKLNKTFVCEINLDILNKLKNNIIEAKTLSKFQSSSRDLTIEISNDLNYQDILLKA 728 Query: 737 IKNVDRLIDDVTVFDVFQGKSLGEGK-KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 I++V + I + + D++ L + K++ IQ + L+ + +I ++I+ N V Sbjct: 729 IRDV-KYITNNKIVDLYLDDKLAKNNTKALTIQFIFNDLEHQLTEAEINTEFEKIISN-V 786 Query: 796 KKTNAVLR 803 KK V+R Sbjct: 787 KKMKVVIR 794 >gi|52549089|gb|AAU82938.1| phenylalanyl-tRNA synthetase beta subunit [uncultured archaeon GZfos23H9] Length = 537 Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 133/557 (23%), Positives = 238/557 (42%), Gaps = 86/557 (15%) Query: 157 IDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIK------ 205 +DV PNR D V G+A + + GL + ES LE++ Sbjct: 41 MDVEFFPNRPDLFSVEGVARTMKQFLDIKPGLATYNVAKSRIEMVVESSVLEVRPYIVCG 100 Query: 206 --FDLD-DSSLCKGFAMCCVKGVRNNVAPNWMRQRLK-AVGLRSISALVDITNYVSLDRG 261 DL DSS + + ++ ++ R R K +VG+ + + Y ++D G Sbjct: 101 VVRDLHFDSSTIESLML-----LQEHLHRGIGRNRAKVSVGVHDLGKVKPPFLYRAVDPG 155 Query: 262 Y---PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIG 318 + P + ++++L K + D Y L ++ S G + S II Sbjct: 156 FSFVPLDYEEEMSMAEILERHPKGVAYKYILEDETNYPL-----ILDSSGGVISFPPIIN 210 Query: 319 GKHAGCDDNTTDVLVEV-ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 + ++TTD+ ++V L D +++A L II + ERG LQ Sbjct: 211 AERTRVTESTTDIFLDVTGLDDNVSVA-----LNIIACALA--ERGGQLQ---------- 253 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 S++L +A P+ + ++V L+G+++ ED + ER+G S Sbjct: 254 SVVLHYPDAEIETPSLA------PKTMETSVADVNSLTGLELSAEDCKKCCERMGLSAKL 307 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 + D + +V +P++R D+ D++E+I YG D+IK E +P T V + + + + R Sbjct: 308 KSDGRLDVIIPAYRSDILHPWDIIEDIAIGYGYDRIKPE-IPGTMVIGE--VHPIEDKKR 364 Query: 497 YVKRVLASRAMMEVVNWSFISKEQS---VLFGGGQRELEILNPISADMSNMRTSLLPGLL 553 V+ ++ EV+ ++ S+ + +L + E+++ +PIS + + +R++++P LL Sbjct: 365 QVREIMTGLGYFEVLTFTLTSERKQFELMLRKRHEEEVKVASPISTEHTMLRSTIMPNLL 424 Query: 554 KATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS-EER 612 + N R + IFEV V N +KY A + ++ R D +ER Sbjct: 425 EILALNQHRDLPQ-RIFEVGPVVLNIK---EKYRLAAVSTHANANFAEVRSVVDSVLKER 480 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 C +D + + GR IK + + G FGE HP Sbjct: 481 C---------------------MDEVELSESEDGAFLAGRRADIKVDGKRI-GVFGELHP 518 Query: 673 NILDFFGLSNPICGFEV 689 ++ FGL +P+ GFEV Sbjct: 519 AVILNFGLDHPVVGFEV 535 >gi|256384377|gb|ACU78947.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|256385209|gb|ACU79778.1| phenylalanyl-tRNA synthetase, beta subunit [Mycoplasma mycoides subsp. capri str. GM12] gi|296455477|gb|ADH21712.1| phenylalanyl-tRNA synthetase, beta subunit [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 794 Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 174/848 (20%), Positives = 356/848 (41%), Gaps = 99/848 (11%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN-PDL 58 M T +WLK +L+ D +S ++I L S+G EV+ V + +L+ I+ + + P+ Sbjct: 1 MIITRNWLKKYLNLDNISNDQINMALNSLGFEVDSVYDLNSLNSELILGYVEQSKQIPNT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +Q+VCGA NV V + AP + I N + + +KI+ ES GM+ Sbjct: 61 HLKLNQVNIGT-KSLQIVCGASNVDVNQFVIIAPINATIA-NGLTLTSKKIQNYESQGMI 118 Query: 119 CSEKELML------SDDSASIME-----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 C+ E+ + +D I L + +G + + L D + ++ LT NRSD Sbjct: 119 CALNEIGIDLSVINKEDQLKIYNVFDHNLDLKKYIGSDVKQIIGLDDYLFEIDLTLNRSD 178 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDL----DDSSLCKGFAMCCV 222 C+ I +L A L+ N+ S + L++K DL D ++ + Sbjct: 179 CLASFQILKEL--ANYFDLEIKNLDNNFSDFKKNNLDLKIDLVNQVKDQIKTISYSYFEL 236 Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 +N+ + LK + S + L+ + +S +H+ + D+ ++ + Sbjct: 237 NN-KNDKLDSKDEIFLKLNQINSSNHLITNLSLISTLSTAQTHI-----LIDLDKLKSSN 290 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 + + DN+E + + ++ ++ +I G+ D+N+ +VL + +P N Sbjct: 291 LKLEFINHDNKEL------LCLTNNNKLVNIIGLDTQNEFNVDNNSKNVLNIMLNIEP-N 343 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI-----CIARNI 397 + R + L I+++ LQ I K I + +L T S++ I + Sbjct: 344 LMRKQQKLLNISNTY--------LQRYI---KPINPNLFNLANQTFSNLLNDYQLINKAY 392 Query: 398 TYKPRKIVFMN--------SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSW 449 K K F N +E+ L G ++ I+ + + L F + + D + + Sbjct: 393 EVKILKQTFKNKQSLEIKLNEINDLLGTNLTIKQIKSLFKHLDFKITNKDDLLDFQIDQN 452 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYV-------KR 500 R D+ K DL EE+ R+Y D+I PL T + +NL+ L+ T Y+ + Sbjct: 453 RIDITSKNDLCEEVARLYSYDKIDEVPLSFTSFKKAKNLNLKLENKLTNYLIGLGFNNTK 512 Query: 501 VLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 + ++ E W+ LF + + +++P+S RT+L L+ N Sbjct: 513 TYSLTSLNEAKYWN--------LFNISEF-INLVSPLSNLRQTYRTNLSKSLIDVAIFNH 563 Query: 561 DRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 + +FE++ +Y+ +++ S ++ + ++ + + Sbjct: 564 SINNKELKLFEIADIYD----------LNNLKQRHLVFLTSNHIYKNSLNQQLIENNFYY 613 Query: 621 AKADALSVIEPF-VSLDSLRFES--GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 K ++ + + L +++++ HP + I +++ GY + +P Sbjct: 614 NKEILENIFNLYNLDLSEIQYQNDLNLIKEIHPYINTTIYYQNQLI-GYLYKLNPKFESE 672 Query: 678 FGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNI 736 L NP E+ LD + + + K LS RDL + + L N Sbjct: 673 NKL-NPTFVCEINLDILNQFKNSFIEAKT---LSKFQSSSRDLTIDISNDLTYQKVLFNA 728 Query: 737 IKNVDRLIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVV 795 + +V + + + D++ +L K++ IQ + L +++I ++I++N + Sbjct: 729 LSDV-KYLKSHKIVDLYLDDNLIKNNTKALTIQFVFNDLDHQLTENEINQEFEKIIKN-I 786 Query: 796 KKTNAVLR 803 K+ V+R Sbjct: 787 KQMKVVIR 794 >gi|304373328|ref|YP_003856537.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyorhinis HUB-1] gi|304309519|gb|ADM21999.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyorhinis HUB-1] Length = 728 Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 162/753 (21%), Positives = 315/753 (41%), Gaps = 108/753 (14%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL 58 M F+L LK +LD ++LE + + SIG E+E + ++ + +NP+ Sbjct: 1 MIFSLKKLKQLANLDKSITLEDVTKAINSIGFELESATKLNNIQGIKFGHIIELYKNPNA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 D C I D K + IQ A N++ + PG+ E +I ++++GI S Sbjct: 61 DNLTVCQIQFAD--KQRTIQ--TRATNLKQDDYVMAFVPGASSGE--VIFAAKELKGIIS 114 Query: 115 TGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD-------YLELSDPIIDVSLTPNRSD 167 GM+ S EL DS+ + + D + D Y +L D ++D+ + NR+D Sbjct: 115 EGMLVSLNELGF--DSSLVSKEVADGIFSFKKVDLNLDPLDYFDLDDYLLDIKILANRAD 172 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 +A +L A ++S++I ++ K S + + F + G Sbjct: 173 ANSYLIMAKELAAY-----------FRINSQTIVIKNKPSFKSSFVFEDFLDNKLTGFEA 221 Query: 228 NVAPNWM-----RQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 + ++ + L ++ ++ +VD++N + G P HV+D +++ V Sbjct: 222 KMDEDFELSIQDQLLLLKSSIKLVNPVVDLSNLTLIMTGQPVHVYDVDKLNLQKLVPAIK 281 Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 S K L N+E ++S V+ + + + +IG + D N+ ++L E+ ++D Sbjct: 282 SQVKETVLGNKEVEISNALVICNENEEVLAFPAVIGLEKNAVDKNSKNILFEIGIFDTQQ 341 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 ++ K L I + R + L + L H + S + I +A T + Sbjct: 342 TRKTTKELKINNLTSNRAIKNFALGSL--DLAH--KFLKSYLNNFSFPINLA---TISKK 394 Query: 403 KIVFMNSEVKRLSGI----DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +I F ++K ++GI D ++ L L+ LGF ++ +V +P++R D+E D Sbjct: 395 EITFDLHKMKHIAGIEFYKDADFKNVLVSLKSLGFEF--DFPNKKVKIPTYRYDIELNED 452 Query: 459 LVEEILRIYGVDQIKSEP-LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 ++EE LR +G ++ EP LP +N + +K + + EV ++ +S Sbjct: 453 MLEEFLRFFGYTKL--EPTLP-------KNSVFKIQAFDVLKEQIRALGFTEVKTYTLVS 503 Query: 518 KEQSVL--FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + ++ F + ++ + +S + +R + + + N+ R I + FEV + Sbjct: 504 QLKNEFNPFNFTE-QINLSTFLSKERETIRNTQAISISEIVEYNLKRKIEAVSFFEVGMI 562 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 E + A + + + ++LF S+ FV Sbjct: 563 ----NSEINSLVLASTEFNFYQL-------------KQKLLNLF-------SLDFEFVRT 598 Query: 636 DSLRFESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 DS +F +G A +Y+ ++LG+ G+ HP + L+N E+ LD Sbjct: 599 DSEQFHNGVSAKIYYN-----------NVLLGWIGKPHPKL----KLANAFY-LEINLDK 642 Query: 694 IPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQ 726 + Q+ K K + RD+ F +D+ Sbjct: 643 L---QEFLVKNNKFQAYNINELKTRDITFTLDK 672 >gi|329891060|ref|ZP_08269403.1| phenylalanyl-tRNA synthetase beta chain [Brevundimonas diminuta ATCC 11568] gi|328846361|gb|EGF95925.1| phenylalanyl-tRNA synthetase beta chain [Brevundimonas diminuta ATCC 11568] Length = 186 Score = 105 bits (261), Expect = 4e-20, Method: Composition-based stats. Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 8/175 (4%) Query: 637 SLRFESGAP-SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 SL+ G+ W+HPGRS ++ + V+ FG HP +L P+ FE+ LDS+P Sbjct: 13 SLQLAQGSNRDWWHPGRSARLQLGPKNVIVEFGALHPRVLKALDADGPMLAFEIVLDSVP 72 Query: 696 ISQKKRTKT-----KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTV 749 + ++ K+ + L +L P+ RD AF++D+ G L + D+ LI +V V Sbjct: 73 EPRGQKGKSGAGKARGAADLPNLMPLTRDFAFLMDEAKAVGDLTRAVAGADKALIAEVRV 132 Query: 750 FDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 FDV++G+ + EG+KSVAI+V +QP T + +I L +I + K LRS Sbjct: 133 FDVYRGQGVPEGQKSVAIEVEVQPRAATLTEAEIEALTAKIT-SAATKAGGTLRS 186 >gi|167463871|ref|ZP_02328960.1| phenylalanyl-tRNA synthetase, beta subunit [Paenibacillus larvae subsp. larvae BRL-230010] Length = 302 Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 86/319 (26%), Positives = 151/319 (47%), Gaps = 35/319 (10%) Query: 502 LASRAMMEVVNWSFISKEQ----SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 L + EV+ ++F +Q VLF + + + P+S + S +RTSLLP LL+ Sbjct: 1 LTQTGLHEVITYTFTHLQQMNTLPVLFPDA-KPVSLAMPMSEERSILRTSLLPQLLEVAA 59 Query: 558 RNVDRAIADFAIFEVSHVY----ENDTPEGQK-----YMAAGIRKGSSGIEGSGRLWSDK 608 N +R I D +IFE+ + E T + Q+ + G R G+ W +K Sbjct: 60 YNRNRNIEDVSIFEIGSAFVTGQEKVTDQPQEIVLLSMLMTGKRHGAH--------WREK 111 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS---AEIVLG 665 + VD +D K A + ++ + + + + AP YHPGR+ + + +G Sbjct: 112 AAT----VDFYDLKG-AFERVTNYLGITGIEYCAEAPEGYHPGRTAGVYLHTGDGKRKIG 166 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVD 725 G+ HP + L++ EV L + I Q K+ L + RD+A +V Sbjct: 167 RIGQLHPVLQKQKDLADTYV-LEVELTPL-IEQAGFKIAYKL--LPKYPAISRDIAVVVS 222 Query: 726 QHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR 784 +P + +I+ L++++TVFDV+ G +GEGKKS+A ++ + + T +D+++ Sbjct: 223 TEVPVADMQQVIRQTAGDLLEELTVFDVYTGVHVGEGKKSIAFSLIYRHPERTLQDNEVT 282 Query: 785 ILMDRIVENVVKKTNAVLR 803 L R+V + +A LR Sbjct: 283 ELHGRVVNALEASFHAELR 301 >gi|331703581|ref|YP_004400268.1| Phenylalanyl tRNA synthetase beta chain [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802136|emb|CBW54290.1| Phenylalanyl tRNA synthetase beta chain [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 794 Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 172/847 (20%), Positives = 355/847 (41%), Gaps = 97/847 (11%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERN-PDL 58 M T +WLK +L+ D +S ++I L S+G EV+ V + +L+ I+ + + P+ Sbjct: 1 MIITRNWLKKYLNLDNISNDQINMALNSLGFEVDSVYDLNSLNSELILGYVEQSKQIPNT 60 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +Q+VCGA NV V + AP + I N + + +KI+ ES GM+ Sbjct: 61 HLKLNKVNIGT-KSLQIVCGASNVDVNQFVIIAPINATIA-NGLTLTSKKIQNYESQGMI 118 Query: 119 CSEKELML------SDDSASIME-----LPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 C+ E+ + +D I L + +G + + L D + ++ LT NRSD Sbjct: 119 CALNEIGIDLSVINKEDQLKIYNVFDHNLDLKKYIGKDVKQIIGLDDYLFEIDLTLNRSD 178 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSS-ESIPLEIKFDLDDS--SLCKGFAMCCVK- 223 C+ I +L A L+ N+ S + L++K DL + K + + Sbjct: 179 CLASFQILKEL--ANYFDLEIKNLDNNFSDFKKNNLDLKIDLTNQVKDQIKTISYSYFEL 236 Query: 224 GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 +N+ + LK + S + L+ + +S +H+ + D+ ++ + Sbjct: 237 NNKNDKLDSKDEIFLKLNQINSSNHLITNLSLISTLSTAQTHI-----LIDLDKLKSSNL 291 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 + + DN+E + + + ++ +I G+ D+N+ +VL + +P N+ Sbjct: 292 KLEFMNHDNKEL------LCLTDNNKLVNIIGLDTQNEFNVDNNSKNVLNIMLNIEP-NL 344 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI-----CIARNIT 398 R + L I+++ LQ I K I + +L T S++ + + Sbjct: 345 MRKQQKLLNISNTY--------LQRYI---KPINPNLFNLANQTFSNLLNDYQLVNKAYE 393 Query: 399 YKPRKIVFMN--------SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 K K F N +E+ L G ++ I+ + + L F + + + + + R Sbjct: 394 VKILKQTFKNKQSLEIKLNEINDLLGTNLTIKQIKSLFKHLDFKITNKDELLDFQIDQNR 453 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYV-------KRV 501 D+ K DL EE+ R+Y D+I PL T + +NL+ L+ T Y+ + Sbjct: 454 IDITSKNDLCEEVARLYSYDKIDEIPLSFTSFKKAKNLNLKLENKLTNYLIGLGFNNTKT 513 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + ++ E W+ LF + + +++P+S RT+L L+ N Sbjct: 514 YSLTSLNEAKYWN--------LFNISEF-INLVSPLSNLRQTYRTNLSKSLIDVAIFNHS 564 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 + +FE++ +Y+ +++ S ++ + ++ + + Sbjct: 565 INNKELKLFEIADIYD----------LNNLKQRHLVFLTSNHIYKNSLNQQLIENNFYYN 614 Query: 622 KADALSVIEPF-VSLDSLRFES--GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 K ++ + + L +++++ HP + I +++ GY + +P Sbjct: 615 KEILENIFNLYNLDLSEIQYQTDLNLIKEIHPYINTTIYYQNKLI-GYLYKLNPKFESEN 673 Query: 679 GLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIP-AGTLVNII 737 L NP E+ LD + + + K LS RDL + + L N + Sbjct: 674 KL-NPTFVCEINLDILNQFKNSFIEAKT---LSKFQSSSRDLTIEISNDLTYQKVLFNAL 729 Query: 738 KNVDRLIDDVTVFDVFQGKSL-GEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVK 796 V + + + D++ +L K++ IQ + L+ +++I ++I++N +K Sbjct: 730 SGV-KYLKSHKIVDLYLDDNLIKNNTKALTIQFVFNDLEHQLTENEINQEFEKIIKN-IK 787 Query: 797 KTNAVLR 803 + V+R Sbjct: 788 QMKVVIR 794 >gi|330902928|gb|EGH33871.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 179 Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats. Identities = 67/184 (36%), Positives = 102/184 (55%), Gaps = 9/184 (4%) Query: 164 NRSDCIGVRGIALD---LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 NR DC+ V G+A + L AA + + + +S + E P+E+ + C + Sbjct: 1 NRGDCLSVAGLAREVGALYAAEVTRPQVAAVSA-VHDEVRPVEVLAPV----ACPRYLGR 55 Query: 221 CVKGVR-NNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 ++ V + P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR Sbjct: 56 VIRNVDLSRPTPLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVR 115 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 A GEK++ LD QE L D +VIA +IAG++GG+H+G T D+ +E A +D Sbjct: 116 MAEEGEKLVLLDGQEVSLRADTLVIADHQCALAIAGVMGGEHSGVTAGTRDIFLESAFFD 175 Query: 340 PINI 343 I++ Sbjct: 176 TISV 179 >gi|149193719|ref|ZP_01870817.1| phenylalanyl-tRNA synthetase beta subunit [Caminibacter mediatlanticus TB-2] gi|149135672|gb|EDM24150.1| phenylalanyl-tRNA synthetase beta subunit [Caminibacter mediatlanticus TB-2] Length = 748 Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 11/206 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL++ +D +D+S E I DTL IG EVE E I +V+ E++P+ D Sbjct: 1 MIVTRKWLEEFIDLSDISTEIIIDTLNRIGQEVEGYKKIEIPQNVVIGEVVECEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +++ G + +Q+VCGA NV G V A G+ +P + K+RGIES GM+ Sbjct: 61 KLNLCKVNVG-DEVLQIVCGASNVEAGQFVVVAKIGAILP-GGFKIKKAKLRGIESFGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-RLSDY--LELSDPIIDVSLTPNRSDCIGVRGIA 175 C+ +E+ L D I L +D +G ++ +Y + +D II++ +T NR DC ++GIA Sbjct: 119 CAAREVGLPDFHDGI--LVLDNSLGELKIGEYAGIYFNDEIIELGVTANRGDCFSIKGIA 176 Query: 176 LDLVAAGLGK-LKEINISCPLSSESI 200 +L +AGL K LK + S E I Sbjct: 177 REL-SAGLNKDLKNFDFSFEEMPEGI 201 Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 33/402 (8%) Query: 402 RKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 KI+ +N E+ + G ++ ++ + IL++L F ++ D+ +V +P +R D+E D+ Sbjct: 369 EKIINVNIEEINEIIGFEIEEKEIVEILKKLSFEIVNIDDENIKVKIPLFRSDIENIQDI 428 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ-SRTRYVKRVLASRAMMEVVNWSFISK 518 EE+LR+YG+D+I + PL + +D+ N +++ R +K S E +++ F +K Sbjct: 429 AEEVLRVYGIDKIPNRPLEFVE-KDRTNKTIENIDFIREIKLKSVSNGFYEAIHFVFDNK 487 Query: 519 E--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 E Q F L++LNPI+ +++ +RT+LL LL N +F VY Sbjct: 488 ERLQKYGFEVLDDNLDLLNPIANELNTLRTTLLLQLLDDIKFNKANGYKRIYLFSQGSVY 547 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 E RK + + G + K+ + VD F D LS V D Sbjct: 548 NKKREE--------FRKIAFVVNGFADYENPKNHGKPNKVD-FKFIVDKLSQ----VVGD 594 Query: 637 SLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 E+ HP ++ IIK I G + HP I F + + E+ LD Sbjct: 595 FELVENDYHPIAHPYQNAKIIKDGKNI--GVVAKLHPKIAKDFDIDDTYFA-EINLD--- 648 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQG 755 I K++ + K ++ V RDL+ +VD++I + II N++ I ++ F Sbjct: 649 ILSKEKKEAKDIIKFPK---VTRDLSLVVDKNISYLEVKKIIDNLN--IKELREFYPIDI 703 Query: 756 KSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 LG+ S+ I+ +IQ K T ++++I +M++I++++ +K Sbjct: 704 YDLGDN-NSLTIRFIIQANK-TLQENEINDIMEKILKSLEEK 743 >gi|205374407|ref|ZP_03227204.1| phenylalanyl-tRNA synthetase subunit beta [Bacillus coahuilensis m4-4] Length = 299 Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 22/313 (7%) Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKAT 556 ++R L + + V +S ++ ++ + + E +++L P+S + SN+R S++P LL+A Sbjct: 1 MRRTLEGAGLYQAVTYSLTNETKATQYALVKSEPVKLLMPMSEERSNLRLSIVPQLLEAA 60 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 NV R A++EV V+ D E + I +G+ + W + +E V Sbjct: 61 SYNVARKNDSVALYEVGSVFIKDETEELPFEVEHIAGVLTGL-WTNHPWQGEKKE----V 115 Query: 617 DLFDAKA--DALSV---IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 D F AK +AL + P++ E HPGR+ I + EI+ G+ G+ H Sbjct: 116 DFFVAKGILEALFTKLGVAPYIDYQKANIEG-----MHPGRTAEILLNEEII-GFVGQIH 169 Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAG 731 P++ L + FE+ ++ K+ K + S + RD+A +V + AG Sbjct: 170 PDVQKNLDLKDTYV-FELNAGTLFGEDKEPVKYTTIPRYPS---ITRDIALVVSNEVSAG 225 Query: 732 TLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRI 790 + ++I +L+ +V VFD+++G+ + EGKKSVA + + T D+++ ++ Sbjct: 226 EIKSVINAAGGKLLKEVNVFDLYEGEHMEEGKKSVAFSLTYVDPERTLTDEEVVKAHTKV 285 Query: 791 VENVVKKTNAVLR 803 ++ V K A LR Sbjct: 286 LDAVKDKVGAELR 298 >gi|52548628|gb|AAU82477.1| phenylalanyl-tRNA synthetase beta subunit [uncultured archaeon GZfos17G11] Length = 538 Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 133/565 (23%), Positives = 237/565 (41%), Gaps = 101/565 (17%) Query: 157 IDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIK------ 205 +DV PNR D V G+A + + GL + E+ LE++ Sbjct: 41 LDVEFFPNRPDLFSVEGVARTMKQFLDIKPGLATYNVDKSGIEMVVETSVLEVRPYIVCG 100 Query: 206 --FDLD-DSSLCKGFAMCCVKGVRNNVAPNWMRQRLK-AVGLRSISALVDITNYVSLDRG 261 DL DSS + + ++ ++ R R K +VG+ + + Y+++D G Sbjct: 101 VVRDLHFDSSTIESLML-----LQEHLHRGIGRNRAKVSVGVHDLGKVKPPFRYLAVDPG 155 Query: 262 Y---PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIG 318 + P + ++++L K + D Y L ++ S G + S II Sbjct: 156 FSFVPLDYEEEMSMAEILERHPKGVAYKYILEDKTNYPL-----ILDSRGGVISFPPIIN 210 Query: 319 GKHAGCDDNTTDVLVEV-ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 + ++TTD+ ++V L D +++A L II + ERG LQ Sbjct: 211 AERTRVTESTTDIFLDVTGLDDNVSVA-----LNIIACALA--ERGGQLQ---------- 253 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 S++L +A P+ + ++V L+G+++ ED + ER+G S Sbjct: 254 SVVLRYPDAEMETPSLA------PKTMETSVADVNSLTGLELSAEDCKKCCERMGLSAKL 307 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV-------EDKRNLS 489 + D + +V +P++R D+ D++E+I YG D+IK + +P T V EDK+ Sbjct: 308 KLDGRLDVIIPAYRSDILHPWDIIEDIAIGYGYDRIKPD-IPGTMVIGAVHPIEDKK--- 363 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR----ELEILNPISADMSNMR 545 R V+ ++ EV+ ++ S+ + +R E+++ +PIS + + +R Sbjct: 364 ------RQVREIMTGFGYFEVLTFTLTSERKQFELMLRKRHEEEEVQVASPISTEHTMLR 417 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 ++++P LL+ N R + IFEV V N +KY A + ++ R Sbjct: 418 STIMPNLLEILALNQHRDLPQ-RIFEVGPVLLNIK---EKYRLAAVSTHANANFAEVRSV 473 Query: 606 SDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 D +E C +D + + GR IK + + Sbjct: 474 VDSVLKEMC---------------------MDEVELSESEDGAFLAGRRADIKVDGKRI- 511 Query: 665 GYFGEFHPNILDFFGLSNPICGFEV 689 G FGE HP ++ FGL +P+ GFEV Sbjct: 512 GVFGELHPAVILNFGLDHPVVGFEV 536 >gi|73670220|ref|YP_306235.1| phenylalanyl-tRNA synthetase subunit beta [Methanosarcina barkeri str. Fusaro] gi|121729430|sp|Q468N7|SYFB_METBF RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|72397382|gb|AAZ71655.1| phenylalanyl-tRNA synthetase beta subunit [Methanosarcina barkeri str. Fusaro] Length = 544 Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 145/586 (24%), Positives = 259/586 (44%), Gaps = 102/586 (17%) Query: 140 APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIA------LDLVAAGLGKLK----EI 189 AP+ G +D + + ID+ P+R D V G A LDL GL K + ++ Sbjct: 26 APMIG--ADIERVEEESIDIEFFPDRPDLYSVEGAARAMRGFLDL-ETGLSKYEIKPPKV 82 Query: 190 NISCPLSSESIPLEIKFDLDDSSLCKG--FAMCCVKGV---RNNVAPNWMRQRLK-AVGL 243 +IS SE I L I+ L ++ +G F +K + + ++ R R K ++G+ Sbjct: 83 SISV---SEKI-LRIRPFLG-CAVVRGIKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGV 137 Query: 244 RSISALVDITNYVSLDRGYPSHVFDAS-RISDVLTVRRACSGEKILALDNQEYDLSPDNV 302 +S + Y+++D G+ D + ++S + + G + L + + P + Sbjct: 138 HDLSNVKPPFRYMAVDPGFKFVPLDYTEKMSMTEILEKHPKGTRFAHL-VRGFKKYP--I 194 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV-----ALWDPINIARSGKNLGIITDSR 357 ++ SD + S II G ++TTD+ ++V A++ +NI + Sbjct: 195 ILDSDDNVLSFPPIINGTLTSVTESTTDLFIDVTGLGEAVYTALNIVVTALA-------- 246 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 ERG ++ + V LIL +P+ +EV+ L G+ Sbjct: 247 ---ERGGQIEFVKVVRPDSGELILP---------------DLEPKTRFLTKTEVRDLLGM 288 Query: 418 DVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ++ IE+ ++ LER+ F + + EV VP++R D+ DLVE+I + YG + IK + Sbjct: 289 ELSIEEIVKQLERMRFGAKALDEETIEVKVPAYRADILHNYDLVEDIAKGYGYENIKVK- 347 Query: 477 LPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----- 530 +P T K + +SL ++ V ++ EV+ ++ S + + F +R+ Sbjct: 348 IPETYTPGKSHPISLLRAP---VNEIMVGLGYYEVMPFTLTS--EKINFENMRRQKTDDV 402 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +L+PIS D + +RT+LLP LL+ N R + IFE V N+ GQ A Sbjct: 403 TYVLHPISEDQTMIRTTLLPNLLEILALNQHRELPQ-KIFEFGEVVNNEI-TGQHVAAVS 460 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL--SVIEPFVSLDSLRFESGAPSWY 648 I + F ++++ DAL ++ P+ ES P++ Sbjct: 461 IHP------------------QANFTEIYEV-VDALMREMMLPYEVK-----ESEDPAFL 496 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 R+ + + LG FGEFHP +++ F L + GFE+ L+ + Sbjct: 497 EGRRADVYVNGKK--LGVFGEFHPEVINNFALGYAVVGFELDLNDL 540 >gi|76664770|emb|CAJ17823.1| phenylalanyl-tRNA synthetase beta subunit [Candidatus Phytoplasma solani] Length = 186 Score = 101 bits (251), Expect = 5e-19, Method: Composition-based stats. Identities = 58/175 (33%), Positives = 100/175 (57%), Gaps = 3/175 (1%) Query: 210 DSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDA 269 +S C + C ++ ++ +P W+R L ++ I+ +VDITN + L G P H FD+ Sbjct: 11 ESKACYEYNACMLENIKIKPSPLWLRNTLLQSDIKPINNVVDITNLILLKYGIPLHAFDS 70 Query: 270 SRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTT 329 +I ++ VR+A + E I L+ + L +++VI + ++AGI+G +G +NT Sbjct: 71 QKIKEI-KVRQAFNQEIITTLNQNVFQLDQNDLVITDGIKPIALAGIVGLLESGIKENTQ 129 Query: 330 DVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV-LKHIVSLILSL 383 +++E A + P IA++ + L I T S RFERG+D +IP+ L H L++SL Sbjct: 130 KIILEAAYFLPATIAKTSQKLKIKTQSSLRFERGID-PDLIPLALMHACDLLVSL 183 >gi|268324129|emb|CBH37717.1| Phenylalanyl-tRNA synthetase beta subunit [uncultured archaeon] Length = 539 Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 132/566 (23%), Positives = 237/566 (41%), Gaps = 102/566 (18%) Query: 157 IDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIK------ 205 +DV PNR D V G+A + + GL + E+ LE++ Sbjct: 41 LDVEFFPNRPDLFSVEGVARTMKQFLDIKPGLATYNVDKSGIEMVVETSVLEVRPYIVCG 100 Query: 206 --FDLD-DSSLCKGFAMCCVKGVRNNVAPNWMRQRLK-AVGLRSISALVDITNYVSLDRG 261 DL DSS + + ++ ++ R R K +VG+ + + Y+++D G Sbjct: 101 VVRDLHFDSSTIESLML-----LQEHLHRGIGRNRAKVSVGVHDLGKVKPPFRYLAVDPG 155 Query: 262 Y---PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIG 318 + P + ++++L K + D Y L ++ S G + S II Sbjct: 156 FSFVPLDYEEEMSMAEILERHPKGVAYKYILEDKTNYPL-----ILDSRGGVISFPPIIN 210 Query: 319 GKHAGCDDNTTDVLVEV-ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 + ++TTD+ ++V L D +++A L II + ERG +LQ Sbjct: 211 AERTRVTESTTDIFLDVTGLDDNVSVA-----LNIIACALA--ERGGELQ---------- 253 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 S++L +A P+ + ++V L+G+++ ED + ER+G S Sbjct: 254 SVVLRYPDAEMETPSLA------PKTMETSVADVNSLTGLELSAEDCKKCCERMGLSAKL 307 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV-------EDKRNLS 489 + D + +V +P++R D+ D++E+I YG D+IK E +P T V EDK+ Sbjct: 308 KLDGRLDVIIPAYRSDILHPWDIIEDIAIGYGYDRIKPE-IPGTMVIGAVHPIEDKK--- 363 Query: 490 LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNM 544 R V+ ++ EV+ ++ S+ + +R +++ +PI+ + + + Sbjct: 364 ------RQVREIMTGFGYFEVLTFTLTSERKQFELMRRKRHEEVEVVQVASPINIEHTML 417 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL 604 R++++P LL+ N R + IFEV V N +KY A + ++ R Sbjct: 418 RSTIMPNLLEILALNQHRDLPQ-RIFEVGPVLLNIK---EKYRLAAVSTHANANFAEVRS 473 Query: 605 WSDKS-EERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV 663 D +E C +D + + GR IK + + Sbjct: 474 VVDSVLKEMC---------------------IDEVELSESEDGAFLAGRRADIKVDGKRI 512 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEV 689 G FGE HP ++ FGL +P+ GFEV Sbjct: 513 -GVFGELHPAVILNFGLDHPVVGFEV 537 >gi|308189681|ref|YP_003922612.1| phenylalanine--tRNA ligase [Mycoplasma fermentans JER] gi|307624423|gb|ADN68728.1| phenylalanine--tRNA ligase [Mycoplasma fermentans JER] Length = 728 Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 150/684 (21%), Positives = 295/684 (43%), Gaps = 95/684 (13%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 D ++EK+ + L G EVE + + +++ V+ NP + I+ ++T K + + Sbjct: 18 DETIEKVINNL---GYEVESMTKFSDVKGIKFARIIDVKPNPKSNGLTIVEVETDKGK-L 73 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-----MLSD 128 + A N + + V GS + + + +++ G+ S GM EL L Sbjct: 74 TIQTKAQNAQKNKIAVIFVKGS--QKGDFVFQDKEMAGVVSQGMFSGYSELGYDPNKLPF 131 Query: 129 DSASIMELPIDAPVGGRLS--DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 D I+ L + + +Y L+D IID++ NR D +A ++ A Sbjct: 132 DKDDIILLNPNRYTSLKTDPMEYFGLNDYIIDITTPANRGDSNSYYVLAQEIAAYYQTPF 191 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 K + + I +I+ + + F C K ++ + + V +++ Sbjct: 192 KWFDYKKNYKT-GIHKQIQKVDNGEANALSFLECRFKH-KDTKIEDMLFLAKHNVEAKNV 249 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 A +D+TN + G P+HV+D S I + LT ++ SG K+ L N+E ++ + + I S Sbjct: 250 WA-IDVTNLNLIYTGAPTHVYDRSEIGEELTCKK-YSG-KVTILGNKEIEVK-NALAIYS 305 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 ++ S+A ++G + + + V+ E+ ++P ++ + K + I DS + G L Sbjct: 306 KDKVVSLASVMGLEETAANRKSKYVVFEIGNFNPSDVRHTAKEIKI--DSASSLQGGKVL 363 Query: 367 ------QGMIPVLKHIV-------SLILSLCGGTASDICIARNITYKPRKIV--FMNSEV 411 GM LK+ S++++L T + I + + +K++ + ++ Sbjct: 364 STELVRNGM-EYLKYKAFEDKQPSSVLINLPSKTKNKIFLQQ------KKLLGKYSGLQI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 K L +ED L +R+GF + Y++ +S P++R D+ D++EE R YG D+ Sbjct: 417 KDLDKEFEKVEDQL---QRIGFKIF--YNR--LSAPTYRTDLNCYEDIIEEYFRFYGYDK 469 Query: 472 IKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-- 528 K+E L + +KRN K +L S EV ++ ++ ++ F + Sbjct: 470 FKTEAPALAPFKINKRNND---------KSLLQSMGYQEVRTFT-LTNIDALKFNPFEFK 519 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +L++ +S + +R S++P LL+ N+ R + +FE + Sbjct: 520 EDLKLQTFVSKEREAIRNSIVPSLLEVAEYNLKRKMNRLNLFECGMI------------- 566 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 ++G G L + K+ E+ + D+ + D V +PF + Sbjct: 567 ------NNGKYVYGLLSNTKTFEQVK-QDVVNFLNDNNLVFKPFKD----------NQFI 609 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHP 672 HP S I + + G+ G+ HP Sbjct: 610 HPNVSAKIYQNNSFI-GWLGKVHP 632 >gi|51209898|ref|YP_063562.1| phenylalanyl-tRNA synthetase beta chain [Gracilaria tenuistipitata var. liui] gi|75120511|sp|Q6B8Z8|SYFB_GRATL RecName: Full=Phenylalanyl-tRNA synthetase beta chain, chloroplastic; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|50657652|gb|AAT79637.1| phenylalanine tRNA synthetase [Gracilaria tenuistipitata var. liui] Length = 697 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 157/670 (23%), Positives = 274/670 (40%), Gaps = 72/670 (10%) Query: 154 DPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIK-FDLDDSS 212 D I DV+ T NR D + G+A ++ + LK L +SI + ++ +S Sbjct: 44 DMIFDVTTTANRQDILCTVGLAREISSIFNRDLK-----YKLYKDSIAISTHCLNILNSV 98 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI 272 ++ V NN +P W++ L + ++S++ L DI Y+ L G +FD ++I Sbjct: 99 SLLDLSIVNVNYFYNNRSPLWLQYYLSSYNIKSLNLLTDIPQYIYLKWGQSIEIFDKNKI 158 Query: 273 SDVLTVRRACSGEK--ILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTD 330 S V + +K + D+ +L V+ D I G ++ CD T Sbjct: 159 SSVPIQYSLFNLQKKSHIIYDSPNIELE----VLRYDDVILFPIGFSLNENIKCDAATNS 214 Query: 331 VLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQG----MIPVLKHIVSLILSLCGG 386 +++ + D I K L + S Y +R + QG + V L+ S Sbjct: 215 IVIMGYVCDKQYITDIKKKLKL---STYLSQRCCN-QGSRSDFLNAFYESVYLLGSFGFA 270 Query: 387 TASDICIARNITYKPRKIVFMNS--------EVKRLSGIDVPIEDSLRILERLGFSVIGE 438 T + Y +I+F++ VK S + +++ +LERL F I + Sbjct: 271 TLGKF-YGYHKLYNISRILFIDKVKIQNILGSVKIGSYNYLTVKEIFTLLERLNFLPIYD 329 Query: 439 YDK--FEVSVPSWRQ-DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ--- 492 K F++ +P +RQ D+ D++EE+ RIYG D S+ LPL + D +N+ L Sbjct: 330 SLKSSFKIHIPVYRQDDIVRPIDVIEEVARIYGFDNFISK-LPLNPI-DNKNIFLNNIFA 387 Query: 493 ---SRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLL 549 R RY+ R L + E N+SF +++I NP++ D S +R+SL Sbjct: 388 NKVYRIRYLLRCL---GLHEAQNYSFYDYYP----FNHDTQIKIYNPLAQDQSFLRSSLA 440 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHV---------YENDTPEGQKYMAAGIRKGSSGIEG 600 L N+ + D +FE+ V Y+N + +G+ S + Sbjct: 441 VHLTLNQQDNLRQGNKDIEVFEIGKVFRLYSSSLEYDNTLNSFEFLHLSGLIANSIFLRP 500 Query: 601 SGRLWSDKSEERCRF-----VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 S WSDK + F V+ F + + V + LD + + I Sbjct: 501 S---WSDKEQSLSWFHAKGMVEEFLDRLEVPVVWKKISDLDQSNLFFNLMHLLNMNWTAI 557 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 I +G FG+ N DF N FE L + S + +++ S +P Sbjct: 558 ICNRFHEEIGIFGKL-CNKSDF----NSTYVFEFDLVKLIASIESLNHINSIINPYSSYP 612 Query: 716 -VKRDLAFIVDQHIPAGTL-VNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 + RD++ V + I+ + LI+ + VF+ ++ KS+ +V ++++ + Sbjct: 613 SLTRDISLTVKNSCTISFIKARILSYENNLIESIEVFNYYKDKSIN-AFYNVGLRIVYRA 671 Query: 774 LKDTFRDDDI 783 T DI Sbjct: 672 HNRTLNYSDI 681 >gi|19386913|gb|AAL87035.1|AF332624_6 phenylalanyl-tRNA-synthetase beta-subunit [Azotobacter vinelandii] Length = 161 Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 63/163 (38%), Positives = 96/163 (58%), Gaps = 4/163 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKF+ WL+D ++ VS +++ L+ GLEV+ V S + ++LS E +PD D Sbjct: 1 MKFSEQWLRDWVNPQVSRDELVARLSMAGLEVDSVAPVAGDFSGVVVGEILSSEPHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + R+ G + QVVCGAPN R G+ +A G+ + E+ I K+RG+ES GM+ Sbjct: 61 KLRVCRVGNG-SEVFQVVCGAPNARPGIKIPFAMLGAVLGEDFKIKKA-KLRGVESFGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 CS EL +S+++ ++ELP DAP+G + YL L D I+V L Sbjct: 119 CSAAELKISEENDGLLELPADAPLGLDIRTYLNLDDASIEVDL 161 >gi|238809650|dbj|BAH69440.1| hypothetical protein [Mycoplasma fermentans PG18] Length = 730 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 132/583 (22%), Positives = 262/583 (44%), Gaps = 64/583 (10%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 D ++EK+ + L G EVE + + +++ V+ NP + I+ ++T K + + Sbjct: 20 DETIEKVINNL---GYEVESMTKFSDVKGIKFARIIDVKPNPKSNGLTIVEVETDKGK-L 75 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-----MLSD 128 + A N + + V GS + + + +++ G+ S GM EL L Sbjct: 76 TIQTKAQNAQKNKIAVIFVKGS--QKGDFVFQDKEMAGVVSQGMFSGYSELGYDPNKLPF 133 Query: 129 DSASIMELPIDAPVGGRLS--DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 D I+ L + + +Y L+D IID++ NR D +A ++ A Sbjct: 134 DKDDIILLNPNRYTSLKTDPMEYFGLNDYIIDITTPANRGDSNSYYVLAQEIAAYYQTPF 193 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 K + + I +I+ + + F C K ++ + + V +++ Sbjct: 194 KWFDYKKNYKT-GIHKQIQKVDNGEANALSFLECRFKH-KDTKIEDMLFLAKHNVEAKNV 251 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 A +D+TN + G P+HV+D S I + LT ++ SG K+ L N+E ++ + + I S Sbjct: 252 WA-IDVTNLNLIYTGAPTHVYDRSEIGEELTCKK-YSG-KVTILGNKEIEVK-NALAIYS 307 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 ++ S+A ++G + + + V+ E+ ++P ++ + K + I DS + G L Sbjct: 308 KDKVVSLASVMGLEETAANRKSKYVVFEIGNFNPSDVRHTAKEIKI--DSASSLQGGKVL 365 Query: 367 ------QGMIPVLKHIV-------SLILSLCGGTASDICIARNITYKPRKIV--FMNSEV 411 GM LK+ S++++L T + I + + +K++ + ++ Sbjct: 366 STELVRNGM-EYLKYKAFEDKQPSSVLINLPSKTKNKIFLQQ------KKLLGKYSGLQI 418 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 K L +ED L +R+GF + Y++ +S P++R D+ D++EE R YG D+ Sbjct: 419 KDLDKEFEKVEDQL---QRIGFKIF--YNR--LSAPTYRTDLNCYEDIIEEYFRFYGYDK 471 Query: 472 IKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-- 528 K+E L + +KRN K +L S EV ++ ++ ++ F + Sbjct: 472 FKTEAPALAPFKINKRNND---------KSLLQSMGYQEVRTFT-LTNIDALKFNPFEFK 521 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 +L++ +S + +R S++P LL+ N+ R + +FE Sbjct: 522 EDLKLQTFVSKEREAIRNSIVPSLLEVAEYNLKRKMNRLNLFE 564 >gi|319776865|ref|YP_004136516.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma fermentans M64] gi|318037940|gb|ADV34139.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma fermentans M64] Length = 728 Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 132/583 (22%), Positives = 262/583 (44%), Gaps = 64/583 (10%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEI 73 D ++EK+ + L G EVE + + +++ V+ NP + I+ ++T K + + Sbjct: 18 DETIEKVINNL---GYEVESMTKFSDVKGIKFARIIDVKPNPKSNGLTIVEVETDKGK-L 73 Query: 74 QVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL-----MLSD 128 + A N + + V GS + + + +++ G+ S GM EL L Sbjct: 74 TIQTKAQNAQKNKIAVIFVKGS--QKGDFVFQDKEMAGVVSQGMFSGYSELGYDPNKLPF 131 Query: 129 DSASIMELPIDAPVGGRLS--DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKL 186 D I+ L + + +Y L+D IID++ NR D +A ++ A Sbjct: 132 DKDDIILLNPNRYTSLKTDPMEYFGLNDYIIDITTPANRGDSNSYYVLAQEIAAYYQTPF 191 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSI 246 K + + I +I+ + + F C K ++ + + V +++ Sbjct: 192 KWFDYKKNYKT-GIHKQIQKVDNGEANALSFLECRFKH-KDTKIEDMLFLAKHNVEAKNV 249 Query: 247 SALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 A +D+TN + G P+HV+D S I + LT ++ SG K+ L N+E ++ + + I S Sbjct: 250 WA-IDVTNLNLIYTGAPTHVYDRSEIGEELTCKK-YSG-KVTILGNKEIEVK-NALAIYS 305 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 ++ S+A ++G + + + V+ E+ ++P ++ + K + I DS + G L Sbjct: 306 KDKVVSLASVMGLEETAANRKSKYVVFEIGNFNPSDVRHTAKEIKI--DSASSLQGGKVL 363 Query: 367 ------QGMIPVLKHIV-------SLILSLCGGTASDICIARNITYKPRKIV--FMNSEV 411 GM LK+ S++++L T + I + + +K++ + ++ Sbjct: 364 STELVRNGM-EYLKYKAFEDKQPSSVLINLPSKTKNKIFLQQ------KKLLGKYSGLQI 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 K L +ED L +R+GF + Y++ +S P++R D+ D++EE R YG D+ Sbjct: 417 KDLDKEFEKVEDQL---QRIGFKIF--YNR--LSAPTYRTDLNCYEDIIEEYFRFYGYDK 469 Query: 472 IKSEPLPLTQVE-DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-- 528 K+E L + +KRN K +L S EV ++ ++ ++ F + Sbjct: 470 FKTEAPALAPFKINKRNND---------KSLLQSMGYQEVRTFT-LTNIDALKFNPFEFK 519 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 +L++ +S + +R S++P LL+ N+ R + +FE Sbjct: 520 EDLKLQTFVSKEREAIRNSIVPSLLEVAEYNLKRKMNRLNLFE 562 >gi|21228914|ref|NP_634836.1| phenylalanyl-tRNA synthetase subunit beta [Methanosarcina mazei Go1] gi|24418711|sp|Q8PTA5|SYFB_METMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|20907446|gb|AAM32508.1| Phenylalanyl-tRNA synthetase, beta chain [Methanosarcina mazei Go1] Length = 545 Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 130/580 (22%), Positives = 244/580 (42%), Gaps = 102/580 (17%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 +D + D +D+ P+R D V G A + ++ P E P ++ Sbjct: 31 ADIERVEDEYVDIEFFPDRPDLYSVEG-----AARAMRGFLDLETGLP-EYEIKPYKVSI 84 Query: 207 DLDDSSL-CKGFAMCCV-KGVRNNVAP-----------NWM--RQRLK-AVGLRSISALV 250 + + L + F C V +GV+ + +W R R K ++G+ + + Sbjct: 85 SVSEDILKIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNVK 144 Query: 251 DITNYVSLDRGYPSHVFDAS-RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 Y+++D G+ D + ++S + + G + L + ++ P +++ +D Sbjct: 145 PPFRYMAVDPGFEFVPLDYTEKMSMTEILEKHPKGTRFAHLVSG-FEKYP--IILDADDN 201 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEV-----ALWDPINIARSGKNLGIITDSRYRFERGV 364 + S II G + TTD+ ++V A++ +NI + ERG Sbjct: 202 VLSFPPIINGTLTSVTEETTDLFIDVTGLGEAVYTALNIVVTALA-----------ERGG 250 Query: 365 DLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDS 424 +++ + + L+L +P + + EVK L G+++P+E+ Sbjct: 251 EIEFVRVIRPGGEELVLP---------------DLEPEERLLTTGEVKSLIGMELPVEEI 295 Query: 425 LRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 ++ LER+ F + + EV VP++R D+ DLVE+I + YG + IK + +P T Sbjct: 296 VKQLERMRFGACALDKETVEVRVPAYRADILHNYDLVEDIAKGYGYENIKVK-IPETYTA 354 Query: 484 DKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPI 537 + +SL ++ V ++ EV+ ++ S + V F RE +L+PI Sbjct: 355 GMSHPISLMRAP---VNEIMVGLGYYEVMPFTLTS--EKVNFENMCREKTDDVTYVLHPI 409 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S D + +RT++LP LL+ N R + IFE V N+T GQ A I Sbjct: 410 SEDQTMLRTTVLPNLLEILALNQHRELPQ-KIFEFGEVVSNET-TGQHVAAVSIHP---- 463 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF---ESGAPSWYHPGRSG 654 + F ++++ V++ F+ L + ES P++ R+ Sbjct: 464 --------------QANFTEVYE-------VVDAFMREMMLSYEVKESKDPAFLEGRRAD 502 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + LG FGE P ++ F L + GFE+ L+ + Sbjct: 503 VYVNGKK--LGVFGELQPEVISKFSLGYAVVGFELDLNDL 540 >gi|224372939|ref|YP_002607311.1| phenylalanyl-tRNA synthetase subunit beta [Nautilia profundicola AmH] gi|223589640|gb|ACM93376.1| phenylalanyl-tRNA synthetase, beta subunit [Nautilia profundicola AmH] Length = 749 Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 103/403 (25%), Positives = 183/403 (45%), Gaps = 33/403 (8%) Query: 401 PRKIVFMN-SEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKA 457 P + + +N E++ + G D+ + + IL++L F V I E + ++ VPS+R D++ Sbjct: 369 PARYINLNIEEIRNIIGADIDEKTVVEILKKLNFEVEVINE-ENMKIKVPSFRNDIKNIQ 427 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 D+ EEILRIYG+D+I+S+PL + ++ +K S+ E +++ F Sbjct: 428 DVAEEILRIYGIDKIESKPLYFKETNRINSIIEFHEFINELKYKAISQGFYETLHFVFDD 487 Query: 518 KE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 KE Q F L+++NPI ++ +R++LL LL+ RN +F V Sbjct: 488 KERLQKYGFSIVDEHLDLINPIVKELDTLRSTLLLQLLEDIARNRANGYKRIYLFTTGSV 547 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 Y E QK +A I SG E + + F + D A + E Sbjct: 548 YNRKREESQK-IAFVI----SGYEDYENPINHGKPKNVEFKTMVDKLAQIIGEFE----- 597 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 E+ + HP ++ I + + +G + HP + F + + Y I Sbjct: 598 ---LVENDSHPIAHPYQNAKIIQNG-MPIGVVAKLHPKVAKEFNID------DTYFAEID 647 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQ 754 +S K + + K ++ V RDL+ +VD+ P + II ++ + + D D++ Sbjct: 648 LS-KLKNEMKLAKDINKFPKVTRDLSLVVDKDTPYKEIFKIIDSLGIKELKDFYPIDIY- 705 Query: 755 GKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKK 797 LGE S+ I+ +IQ K T D +I +M++I+ + K Sbjct: 706 --DLGEN-NSLTIRFVIQGEK-TLTDSEINAIMEKILNQLESK 744 Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 11/206 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL++ +D ++S ++I DTL IG EVE E I KV+ E++P+ D Sbjct: 1 MIVTRRWLEEFIDLKNISTQEIIDTLNRIGQEVEGYKKFEVPQNVVIGKVIECEKHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G + +Q+VCGA NV V + G+ +P + + K+RG+ES GM+ Sbjct: 61 KLNVCKVDVGD-EVLQIVCGASNVVNAEYVVVSKVGAVLP-GDFKIKKAKLRGVESHGMI 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGG-RLSDYL--ELSDPIIDVSLTPNRSDCIGVRGIA 175 C+ +E+ L D I + +D +G ++ +Y L+D +I++ +T NR D + GIA Sbjct: 119 CAAREIGLPDFHEGI--IIMDDSLGELKIGEYAGKYLNDEVIELGVTANRGDSFSIYGIA 176 Query: 176 LDLVAAGLG-KLKEINISCPLSSESI 200 +L +AGL LK I S E I Sbjct: 177 REL-SAGLNIDLKNIEYSFEELQEGI 201 >gi|256751287|ref|ZP_05492167.1| t-RNA-binding domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749842|gb|EEU62866.1| t-RNA-binding domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 195 Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 63/188 (33%), Positives = 107/188 (56%), Gaps = 9/188 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M +L WLK+ +D D + I + LT G +VE + + + +S + K++S+E++P+ D Sbjct: 1 MLVSLLWLKEFVDIDEDAKIIAEGLTMSGSKVETITSYGKEISNVVVGKIISLEKHPNAD 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++ I +++Q+V GA N++VG A G+ +P + + + K+RGIES GMMC Sbjct: 61 KLLVGIVDVGTEKLQIVTGAQNIKVGDYIPVALHGATLP-GGVKIKIGKLRGIESNGMMC 119 Query: 120 SEKELMLSD------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S KEL L + I LP P+G +++ L+L D +++ +TPNR DC+ + G Sbjct: 120 SAKELGLDESLLPEYQRNGIFILP-PFPLGMDINEALQLKDDVLEFEITPNRPDCLSMVG 178 Query: 174 IALDLVAA 181 IA + A Sbjct: 179 IARETAAT 186 >gi|300727941|ref|ZP_07061319.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bryantii B14] gi|299774783|gb|EFI71397.1| phenylalanyl-tRNA synthetase, beta subunit [Prevotella bryantii B14] Length = 171 Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 7/159 (4%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN----REALSPFTIVKVLSVERNP 56 MK + WLKD++D D++ ++ D LTS GLEV+ ++ + L + KVL+ E +P Sbjct: 1 MKVSYKWLKDYVDFDLTPQETADALTSTGLEVDSLEEVQSIKGGLQGLFVGKVLTCENHP 60 Query: 57 DLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI--PENNMIVNVRKIRGIE 113 + D I +D GK + Q+VCGAPNV G + A G + E + + ++RG++ Sbjct: 61 NSDHLHITTVDLGKGEPQQIVCGAPNVAAGQKVIVADLGCVLYDGEESFTIKKGRLRGVD 120 Query: 114 STGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLEL 152 S GM+C+E E+ + I+ LP DA VG ++Y L Sbjct: 121 SFGMICAEDEIGVGTSHDGIIVLPEDAVVGTPAAEYYHL 159 >gi|50365216|ref|YP_053641.1| phenylalanyl-tRNA synthetase beta subunit [Mesoplasma florum L1] gi|81391826|sp|Q6F166|SYFB_MESFL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|50363772|gb|AAT75757.1| phenylalanyl-tRNA synthetase beta subunit [Mesoplasma florum L1] Length = 793 Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 113/506 (22%), Positives = 219/506 (43%), Gaps = 56/506 (11%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M T WL+ +LD ++++ E+I L S+G EVE+ + L+ ++ + E +P Sbjct: 1 MIITRKWLEKYLDLSNITNEQISVCLNSLGFEVEQEIDYSKLNTKLVIGHIE-ESDPIEG 59 Query: 60 CAILRIDT--GKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + + T G+++ ++ + N+ + A PG+ + N + + R+I GI S GM Sbjct: 60 TKLKKTKTRIGENKYATILSTSRNIEEDKFAIVALPGAKLA-NGLELENREILGILSEGM 118 Query: 118 MCSEKEL------MLSDDSASIMELP-----IDAPVGGRLSDYLELSDPIIDVSLTPNRS 166 C E+ + D+ + + +D VG +S+ L D +V LT NRS Sbjct: 119 FCGFNEIGLPNSVLTEDEQQDVYYIDSIYKNMDEMVGREISEVLNFDDYTFEVDLTLNRS 178 Query: 167 DCIGVRGIALDLVAAGLGKLK------EINISCPLSSESIPLEIKFDLDDSSLCKGFAMC 220 D + + + ++ A LK ++ P S +I L K + + +++ F Sbjct: 179 DALAAKQLVKEI--ANYFDLKINNNEHKVKFEKPTESITIDLNKKVEDEVNTVSHTFI-- 234 Query: 221 CVKGVRNNVAPN------WMRQRLKAVGLRSI-SALVDITNYVSLDRGYPSHVFDASRIS 273 G++N P W LK ++S + +I N +L G P + DA +++ Sbjct: 235 ---GLKNTNTPFDSSHDVW----LKHSNVKSAQNKFENIANMATLISGQPFILIDADKVN 287 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 LT+ + EK L +V+ S I +I G+ + T +LV Sbjct: 288 GELTLTKQTIDEKEL-------------IVLKSGNSIVNILGLKTEDKFKVTEETVTMLV 334 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLI--LSLCGGTASDI 391 + D I++ + +NL + T R+ + ++ + +VS++ + + Sbjct: 335 VMLNLDQISMRKQQRNLNVSTVDTQRYAKPLNPNLYDQGIDELVSILDEYKMLEDVQKVV 394 Query: 392 CIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 + Y + + +V+ + GI++ +E+ + + L + + + +V R Sbjct: 395 TTVQKQNYDNVYSITL-EKVQDILGIEITVEEIISLFRTLDIEISVKKSELTFTVDKNRT 453 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPL 477 D+ K DL EEI R+YG D I +PL Sbjct: 454 DLYGKNDLCEEIARLYGYDNIIEQPL 479 >gi|330898073|gb|EGH29492.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 216 Score = 95.5 bits (236), Expect = 4e-17, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 15/221 (6%) Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS EG W+ + VD FD KAD +V+ +L F G Sbjct: 9 QEPMLAGVVCGSRLPEG----WAQGRD----VVDFFDVKADVEAVLGFAGALGEFTFAPG 60 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG++ I+ V G+ G HP + GL P+ FE+ L + + R Sbjct: 61 QHPALHPGQTARIERDGREV-GFLGAIHPELSKTLGLDRPVFVFELVLSEVSTGRLPRFH 119 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGK 762 LS V+RDLA + D+ + A ++++I+ N + D+ +FDV+QGK + + Sbjct: 120 -----ELSRFPEVRRDLALLADRDVSASAVLDVIRENAGEWLTDLRLFDVYQGKGIDPHR 174 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ + Q T DD++ I+ ++ ++ NA LR Sbjct: 175 KSLAVGLTWQHPSRTLNDDEVNATTLAILTSLEERLNATLR 215 >gi|196019848|ref|XP_002119055.1| hypothetical protein TRIADDRAFT_63021 [Trichoplax adhaerens] gi|190577151|gb|EDV18459.1| hypothetical protein TRIADDRAFT_63021 [Trichoplax adhaerens] Length = 339 Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 137/294 (46%), Gaps = 29/294 (9%) Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 IKF F V+ + +P W++Q+L+ GL + L+D NY+ L+ GYP Sbjct: 18 IKFKTARVKDYSNFLAISVENLTTFTSPTWLKQKLRQSGLTPSNNLLDFQNYILLETGYP 77 Query: 264 SHVFDASRISD-------VLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGI 316 ++D ++I + L + +A S E A +N Y L+ +++ ++ +I GI Sbjct: 78 FELYDLNKIKNKVEDTTFSLKLEKATSNETFYASNNLTYQLNDSILILKANDLSLAIGGI 137 Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHI 376 I K D T +L+E ++++ I + + LG+ TD R+E+ + +I + + Sbjct: 138 IPHKEFCYTDETKSLLIESSIFNSTKIRQQSRILGLRTDRSARYEKSLKSDSLIESVYQL 197 Query: 377 VSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR---------- 426 +SL+ + + + N + +K+ ++ K ++ I PI+ + Sbjct: 198 ISLLKTTNPNLICKLHTSFNGEF--QKLATIDLHHKTINEILGPIKGYAKSKSKYITPAM 255 Query: 427 ---ILERLGFSVIGEYDK----FEVSVPSWRQ-DVEEKADLVEEILRIYGVDQI 472 L RL F+ +D +EV +P+ R D+ + DL+EEI R++G + Sbjct: 256 VNNYLMRLKFN--NTFDDSELMWEVEIPNSRSDDITRQIDLIEEIGRLHGFNNF 307 >gi|254671875|emb|CBA04111.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha275] Length = 192 Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 59/195 (30%), Positives = 109/195 (55%), Gaps = 14/195 (7%) Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 + R D +D KAD +E + ++ F ++G P+ HPGR+ I + + V+G+ GE Sbjct: 8 KTRNADFYDIKAD----VENLLKNKAVEFVKTGHPA-LHPGRAANIVSDGK-VIGFVGEL 61 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 HP L + L FE+ + ++ K R + +S PV+RDLAF++ + + Sbjct: 62 HPKWLQKYDLPQAPLVFEIDMAAVLECGKTRYRA-----VSKFQPVRRDLAFVMPEAMSH 116 Query: 731 GTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 L+ ++K ++L+ +++VFDV++G L EG KSVA++V++Q +++T D+ + L+ + Sbjct: 117 DDLLLVLKGAANKLVQEISVFDVYRGTGLPEGMKSVAVKVILQDMENTLTDEAVEPLIGK 176 Query: 790 IVENVVKKTNAVLRS 804 ++ A LRS Sbjct: 177 LI-GAATAAGARLRS 190 >gi|330898074|gb|EGH29493.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. japonica str. M301072PT] Length = 157 Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 4/159 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKF+ WL+ + VS +++ L+ GLEV+ V S + +VLS E++PD D Sbjct: 1 MKFSEQWLRGWVSPQVSRDELVARLSMAGLEVDSVTLAAGVFSGVVVGEVLSTEQHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++ G + QVVCGAPNVR GL +A G+ +P + + K+RG+ES GM+ Sbjct: 61 KLRVCQVSNGS-ETFQVVCGAPNVRPGLKIPFAMIGAELP-GDFKIKKAKLRGVESNGML 118 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPII 157 CS EL + + +MEL DAP G + YL L D I Sbjct: 119 CSAAELQAGEGNDGLMELAADAPAGQDIRVYLSLDDASI 157 >gi|20090804|ref|NP_616879.1| phenylalanyl-tRNA synthetase subunit beta [Methanosarcina acetivorans C2A] gi|24418712|sp|Q8TPF7|SYFB_METAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|19915869|gb|AAM05359.1| phenylalanyl-tRNA synthetase, subunit beta [Methanosarcina acetivorans C2A] Length = 545 Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 137/578 (23%), Positives = 251/578 (43%), Gaps = 98/578 (16%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIK 205 +D + D +D+ P+R D V G A + +++ L +I P E+ Sbjct: 31 ADIERVEDEYVDIEFFPDRPDLYSVEGAARAMRGF-------LDLETGLPEYAIKPYEVS 83 Query: 206 FDLDDSSL-CKGFAMCCV-KGVRNNVAP-----------NWM--RQRLK-AVGLRSISAL 249 + ++ L + F C V +GV+ + +W R R K ++G+ + + Sbjct: 84 ISVSENILKIRPFLGCAVVRGVKFTSSSIKSLMDLQEDLHWGLGRNRKKVSIGVHDLKNV 143 Query: 250 VDITNYVSLDRGY---PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 Y+++D + P + ++D+L + L D ++Y +++ + Sbjct: 144 QPPFRYMAVDPSFEFVPLDYTEKMSMTDILEKHPKGTRFAHLVKDFEKYP-----IILDA 198 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEV-ALWDPINIARSGKNLGIITDSRYRFERGVD 365 + + S II G + TTD+ ++V L + + IA L I+ + ERG Sbjct: 199 NDNVLSFPPIINGTLTTVTEQTTDLFIDVTGLGEAVYIA-----LNIVVTALA--ERG-- 249 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 G I ++ I GG ++ + +P++ + EVK L G+D+ +E+ + Sbjct: 250 --GQIEFVRVIRP------GG--EELVLP---DLEPKERLLTTGEVKALMGMDLTVEEIV 296 Query: 426 RILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 + LER+ F + + EV VP++R D+ DLVE+I + YG + IK + +P T Sbjct: 297 KQLERMRFGAAALDKEAVEVKVPAYRADILHNYDLVEDIAKGYGYENIKVK-VPETYTPG 355 Query: 485 KRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPIS 538 K + +SL ++ V ++ EV+ ++ S + + F R +L+PIS Sbjct: 356 KSHPISLMRAS---VNEIMVGLGYYEVMPFTLTS--EKINFENMCRPKTDDVTYVLHPIS 410 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 D + +RT++LP LL+ N R + IFE V N+T GQ A I Sbjct: 411 EDQTMIRTTVLPNLLEILSLNQHRELPQ-KIFEFGEVVSNET-TGQHVAAVSIHP----- 463 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADAL--SVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 + F ++++ DAL ++ P+ ES P++ R+ + Sbjct: 464 -------------QANFTEVYEV-VDALMREMMLPYEVK-----ESEDPAFLEGRRADVY 504 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + LG FGEFHP ++ F L + GFE+ L+ + Sbjct: 505 VNGKK--LGVFGEFHPEVISNFALGYAVVGFELDLNDL 540 >gi|93140705|sp|Q4A6A2|SYFB_MYCS5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|144575062|gb|AAZ43719.2| putative phenylalanyl-tRNA synthetase beta chain [Mycoplasma synoviae 53] Length = 726 Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 112/496 (22%), Positives = 222/496 (44%), Gaps = 47/496 (9%) Query: 1 MKFTLSWLKDHLDTDVSLEK-ICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-L 58 M ++L L +L ++ L++ + L S+G EVE + + KVL+V NP+ Sbjct: 1 MIYSLKHLNKYL-PEIKLDQSVTKALESLGFEVEFFEKFSSSKGLLFAKVLNVFDNPNST 59 Query: 59 DCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 ++ +DT K E+ + + G L + P GS ++G +S GM+ Sbjct: 60 KLQVVELDT-KLGELTIQTTNKVLSKGDLTICYPVGSSYQGKEF--QEVTMQGYKSQGML 116 Query: 119 CSEKEL----MLSDDSASIMELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S E+ L D I+ LP + A + S+ LEL+D I ++S+T NR++ Sbjct: 117 ASFSEIGYDNSLLTDKDQILVLPKNFASLNDDASEKLELNDYIFELSITTNRNEINSYYF 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIP--LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP 231 +A +L A K SC + E F + + L K ++ ++ + V+ Sbjct: 177 LAKELAAYYNTKF-----SCEFLDAKLKQSFESSFKFEGNFLDKNYSFTLLEA-KGKVST 230 Query: 232 NWMRQRLKAVGL--RSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILA 289 ++ + L A + V++TN V ++ G P HV+D +++ +G K+ Sbjct: 231 SFEEKLLLAKHKIDSKFNPAVNLTNLVLINLGIPIHVYDKAKLKSTKFSVGLYNG-KVNL 289 Query: 290 LDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALW---------DP 340 L N++ ++S D + + + ++ S+A +G + + D T++ + E+A + Sbjct: 290 LGNKQVEVS-DALAVFNGDKVVSLAATMGLEESKVDLQTSEFIFEMASFPSKLIRNNAKE 348 Query: 341 INIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK 400 I + + NL T ++Y+ + + ++ L LS +D + + + Sbjct: 349 IKMNSNASNLASKTITKYQVKLAHKF-----LFNYLKDLKLS---NVVNDFELDKKV--- 397 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLV 460 +I F +++R S +P + ++ ++L + E++ ++ VP +R DV D++ Sbjct: 398 --EINFDEEKLQRYSN-GLPSSEFIKAFDKLKL-LEFEFENQKIKVPLYRYDVSIFEDII 453 Query: 461 EEILRIYGVDQIKSEP 476 EE+ R Y D K P Sbjct: 454 EELFRFYNYDNFKEIP 469 >gi|71894322|ref|YP_278430.1| putative phenylalanyl-tRNA synthetase beta chain [Mycoplasma synoviae 53] Length = 719 Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 107/477 (22%), Positives = 211/477 (44%), Gaps = 45/477 (9%) Query: 19 EKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-LDCAILRIDTGKHQEIQVVC 77 + + L S+G EVE + + KVL+V NP+ ++ +DT K E+ + Sbjct: 12 QSVTKALESLGFEVEFFEKFSSSKGLLFAKVLNVFDNPNSTKLQVVELDT-KLGELTIQT 70 Query: 78 GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL----MLSDDSASI 133 + G L + P GS ++G +S GM+ S E+ L D I Sbjct: 71 TNKVLSKGDLTICYPVGSSYQGKEF--QEVTMQGYKSQGMLASFSEIGYDNSLLTDKDQI 128 Query: 134 MELPID-APVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS 192 + LP + A + S+ LEL+D I ++S+T NR++ +A +L A K S Sbjct: 129 LVLPKNFASLNDDASEKLELNDYIFELSITTNRNEINSYYFLAKELAAYYNTKF-----S 183 Query: 193 CPLSSESIP--LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGL--RSISA 248 C + E F + + L K ++ ++ + V+ ++ + L A + Sbjct: 184 CEFLDAKLKQSFESSFKFEGNFLDKNYSFTLLEA-KGKVSTSFEEKLLLAKHKIDSKFNP 242 Query: 249 LVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 V++TN V ++ G P HV+D +++ +G K+ L N++ ++S D + + + Sbjct: 243 AVNLTNLVLINLGIPIHVYDKAKLKSTKFSVGLYNG-KVNLLGNKQVEVS-DALAVFNGD 300 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALW---------DPINIARSGKNLGIITDSRYR 359 ++ S+A +G + + D T++ + E+A + I + + NL T ++Y+ Sbjct: 301 KVVSLAATMGLEESKVDLQTSEFIFEMASFPSKLIRNNAKEIKMNSNASNLASKTITKYQ 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 + + ++ L LS +D + + + +I F +++R S + Sbjct: 361 VKLAHKF-----LFNYLKDLKLS---NVVNDFELDKKV-----EINFDEEKLQRYSN-GL 406 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 P + ++ ++L + E++ ++ VP +R DV D++EE+ R Y D K P Sbjct: 407 PSSEFIKAFDKLKL-LEFEFENQKIKVPLYRYDVSIFEDIIEELFRFYNYDNFKEIP 462 >gi|309800854|ref|ZP_07694986.1| tRNA binding domain protein [Bifidobacterium dentium JCVIHMP022] gi|308222390|gb|EFO78670.1| tRNA binding domain protein [Bifidobacterium dentium JCVIHMP022] Length = 293 Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 77/283 (27%), Positives = 130/283 (45%), Gaps = 39/283 (13%) Query: 5 LSWLKDHLDT--DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAI 62 + WLKDH++ ++ E++ L +GLE E++ + + P + V+ P + I Sbjct: 6 IDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQLVGPIVVGYVVDATPEPQKNGKI 65 Query: 63 L---RIDTG-KHQEIQ---------VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + +D G ++ E ++CGAPN+ G V PG+ +P + + RK Sbjct: 66 INWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLP-GDFKIEPRKT 124 Query: 110 RGIESTGMMCSEKELMLSDDSASIMEL------PIDAPV---GGRLSDYLELSDPIIDVS 160 G S GM SE+EL L D+ I+ L P + G L L +P+++++ Sbjct: 125 YGHISNGMCASERELGLGDNHDGIILLRKYGFTPEEYEALKPGDDAMHLLHLDEPLLEIN 184 Query: 161 LTPNRSDCIGVRGIALDLV----AAGLGKLKEINISCPLSS---ESIPLEIKFDLDDSSL 213 +TP+R RG+A + AA + +N P++ E +I+ ++D++ Sbjct: 185 ITPDRGYAFSYRGVAREYHHSTGAAYVDPAVALNGKAPVTQGLPEGTKTDIEVIVEDNNP 244 Query: 214 CKGFAMC------CVKGV-RNNVAPNWMRQRLKAVGLRSISAL 249 G C V G + PNWMR+RL G+RSIS L Sbjct: 245 IHGVIGCDRYYARAVHGFDPASHTPNWMRRRLTRAGMRSISWL 287 >gi|289673309|ref|ZP_06494199.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 192 Score = 91.7 bits (226), Expect = 5e-16, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 VD FD KAD +V+ +L F G HPG++ I+ V G+ G HP + Sbjct: 9 VDFFDVKADVEAVLGFAGALGEFTFTPGQHPALHPGQTARIERDGREV-GFLGAIHPELS 67 Query: 676 DFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 GL P+ FE+ L + + K LS V+RDLA + D+ + A +++ Sbjct: 68 KTLGLDRPVFVFELVLAEVSTG-----RLPKFHELSRFPEVRRDLALLADRDVSASAVLD 122 Query: 736 IIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 +I+ N + D+ +FDV+QGK + +KS+A+ + Q T DD++ I+ ++ Sbjct: 123 VIRENAGEWLTDLRLFDVYQGKGIDPHRKSLAVGLTWQHPSRTLNDDEVNATTLAILTSL 182 Query: 795 VKKTNAVLR 803 ++ NA LR Sbjct: 183 EERLNATLR 191 >gi|75761059|ref|ZP_00741058.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74491443|gb|EAO54660.1| Phenylalanyl-tRNA synthetase beta chain [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 274 Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 127/273 (46%), Gaps = 19/273 (6%) Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDTPEGQKYMAAGI 591 P+S + S +R SL+P LL+A N+ R A++EV ++ + P+ ++++A G+ Sbjct: 15 PMSEERSQLRLSLVPQLLEAVSYNIARKNDSVALYEVGSIFLPTEAGELPKEEQHLA-GV 73 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 G + W + + VD F K + + + + + HPG Sbjct: 74 MTGLA----LHHAWQGEK----KVVDFFVVKGVLEGLFDVLGVSNQITYAPAKREGMHPG 125 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 R+ I E++ G+ G+ HP + N FE+ L I + + T + Sbjct: 126 RTADIVLDGEVI-GFIGQLHPEAEKQLDVKNTFV-FELSLVKIFGADAEETYYSAIPRFP 183 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 S+ RD+A +V + AG + +I L+ DVT+FD+++G+ + EGKKS+A + Sbjct: 184 SM---TRDMAVVVTKETKAGEMKQVIAEAGGELLKDVTLFDLYEGEKMEEGKKSLAFSMT 240 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D+++ +R++ V +K A LR Sbjct: 241 YFDAERTLTDEEVTEAHNRVLTTVEEKFGAELR 273 >gi|237752571|ref|ZP_04583051.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] gi|229376060|gb|EEO26151.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter winghamensis ATCC BAA-430] Length = 784 Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 11/199 (5%) Query: 1 MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPD-- 57 M FT S L L +++ + TL IGLEVE A + K+L +++PD Sbjct: 1 MIFTRSILSHILPLKNITSAMMYSTLNKIGLEVESFCAVVAPKRVVVGKILECQKHPDAT 60 Query: 58 -LDCAILRID--TGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 L+ + I G ++ Q+VCGA N R G+ A G+ +P + + +RG+ES Sbjct: 61 KLNVTQVAISGTEGSYETRQIVCGASNAREGIYVAVALEGAELP--GITIKKAMLRGVES 118 Query: 115 TGMMCSEKELMLSDDSASIMELPI---DAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 GM+CS EL + I+EL + +G +S+Y +D I ++S+TPNR DC+ + Sbjct: 119 CGMLCSTAELGFPKVNDGIVELDSSIGELVIGKEISEYPVFNDEIYEISITPNRGDCMSL 178 Query: 172 RGIALDLVAAGLGKLKEIN 190 G+A DL A +LK +N Sbjct: 179 MGVARDLSVAFDLELKPLN 197 Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 101/404 (25%), Positives = 182/404 (45%), Gaps = 43/404 (10%) Query: 413 RLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPS-WRQDVEEKADLVEEILRIYGVD 470 R+ G+ + + IL+ LGF V I + F ++ P +R D+ D+ EEI+R YG+D Sbjct: 411 RIIGVCLEKLKVINILKGLGFGVEIASDENFIIAEPPLFRHDIVSAQDVAEEIIRFYGID 470 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM----MEVVNWSFISKE--QSVLF 524 + S PL Q + S R Y KR +A +A+ E V++ F +E QS F Sbjct: 471 NVPSAPLVFVQ----NHQSDDALREYYFKRKIAQKAIGVGFNEAVHFVFEDREKLQSCGF 526 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + L++LNPI+ D++ +R++LL GLL+A N + ++FE+ VY+ + Sbjct: 527 EVLEDTLDLLNPITQDLNTLRSTLLLGLLRAVVHNCNNGFNAVSLFEMGAVYDKKREQ-- 584 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + S G SG L ++ + + D ++ + SL+ L Sbjct: 585 --------RASLGFIQSGLLCEERYPNAKGIREGYFGFCDRIARVIGEFSLEPLE---SK 633 Query: 645 PSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNP-ICGFEVYLDSIPISQKKRT 702 +H G+ +++ E+ G HP FGL +C ++ L + I Q Sbjct: 634 IKLFHSGQCAKVLQNGKEV--GVIATLHPQFASEFGLDETYLCELDLDLLTEAIPQ---- 687 Query: 703 KTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVF---DVFQGKSLG 759 V S +RDL+ ++D+ IP + I+++ + + F D+++ +L Sbjct: 688 ----VQMYSKFQKAQRDLSVVLDKKIPYYEIRKCIESLK--VPSIVGFYPLDIYEDSTL- 740 Query: 760 EGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + K S+ I+ +Q T + DI ++ ++E + LR Sbjct: 741 QDKMSLTIRFALQSDVKTLEEKDINAALEVVLEELKNSFGVELR 784 >gi|218659177|ref|ZP_03515107.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli IE4771] Length = 121 Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats. Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 4/95 (4%) Query: 714 HP---VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 HP VKRD AF+VD+ + +G ++ DR L+ V VFD+F+G S+GEGKKSVAI+V Sbjct: 27 HPFQAVKRDFAFVVDKTVESGAIIKAATGADRKLVTGVNVFDIFEGASVGEGKKSVAIEV 86 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 IQP++ T D+D L +IV +V K T VLRS Sbjct: 87 QIQPVERTLTDEDFEALTQKIVASVAKFTGGVLRS 121 >gi|207109530|ref|ZP_03243692.1| phenylalanyl-tRNA synthetase subunit beta [Helicobacter pylori HPKX_438_CA4C1] Length = 179 Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 12/176 (6%) Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASR 505 VP++R DV+ D+ EEILR G++ + S+PL +N + R+ + L + Sbjct: 2 VPNFRHDVKTIQDIAEEILRFVGINNLVSKPL---HCVSSKNSNPHYDTHRFFEN-LKHK 57 Query: 506 AMM----EVVNWSFISKE--QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 A+ EV+++ F SKE Q + F + LE+ NPI+ D++ +RTSL+ GLL A+ RN Sbjct: 58 ALACGFKEVIHYVFYSKEKQQKLGFEVLEDPLELQNPITTDLNTLRTSLVCGLLDASLRN 117 Query: 560 VDRAIADFAIFEVSHVYENDTPEGQK--YMAAGIRKGSSGIEGSGRLWSDKSEERC 613 + A++E VY + E QK ++A+G++K S + G+ W S C Sbjct: 118 KNLGFKSIALYEKGSVYNSKREEIQKLGFLASGLQKKESYPDAKGKAWDFYSFAEC 173 >gi|91772492|ref|YP_565184.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcoides burtonii DSM 6242] gi|121689372|sp|Q12YP2|SYFB_METBU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|91711507|gb|ABE51434.1| Phenylalanyl-tRNA synthetase, beta subunit [Methanococcoides burtonii DSM 6242] Length = 540 Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 112/400 (28%), Positives = 184/400 (46%), Gaps = 65/400 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV-ALWDPINIARSGKNLGIITDSRYRF 360 ++ S+G++ S II G +++TTD+ ++V L D + A L I+ + Sbjct: 194 LITDSEGKVLSFPPIINGTLTRVEESTTDLFIDVTGLGDAVYTA-----LSIVVSALA-- 246 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERG ++ S+ + GT + ++T PR + S++ L GI + Sbjct: 247 ERGGKIE----------SVKVVYPDGTEK---VTPDMT--PRTLNVPRSDIDSLIGIKLT 291 Query: 421 IEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 ++ + L+R+ F SV+ + D FE+SVP++R D+ D+VE+I YG D+IKSE Sbjct: 292 DDEIINELKRMRFDASVLEDGDMFEISVPTYRADILHNFDIVEDIAIGYGFDKIKSEFPK 351 Query: 479 LTQVEDKRNLSLQQSRTRYVKR-VLASRAMMEVVNWSFISKEQSVLFGGGQRELE----- 532 + +S+ TR V R ++ S EV+ ++ S Q V F RE Sbjct: 352 SATIGCAHPISV----TRGVMREIMVSLGYSEVMPFTLTS--QKVHFEWMNREETDDVTF 405 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 +L+PIS D + +RT++LP L++ N + +FEV V N + + ++AA Sbjct: 406 VLHPISEDQTMVRTTILPNLIEIFSLNQHHELPQ-RLFEVGEVVVNS--KNRLHLAA--- 459 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFESGAPSWYHPG 651 S ++ +E R ++ DA + E VS D E G Sbjct: 460 -------ASIHAQANFTEIR----EVLDAVMRERDIEYEVVVSEDPAFIE---------G 499 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 R I + E V G GE +P ++ FGL PI GFE+ L Sbjct: 500 RRADILVNGEKV-GMMGELYPEVIINFGLGQPIVGFEIDL 538 >gi|110589262|gb|ABG77140.1| phenylalanyl-tRNA synthetase beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 287 Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 23/209 (11%) Query: 372 VLKHIVSLILSLCGGTAS---DICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 ++ +L+L + GG A ++ I +P +I+ + ++RL GI++ ++ IL Sbjct: 67 AMQRATALLLDIVGGEAGPVVEVSDEEKIEARP-QILLRHQRIQRLLGIEISTDEVEDIL 125 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 RL E + V+ PS R D+ +ADL+EE+ RIYG +I + +R Sbjct: 126 SRLEMQFSVEEGGWLVTAPSCRFDISIEADLIEEVGRIYGYARIPT----------RRGA 175 Query: 489 SLQQSRTRY--------VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 + R R K +L SR EV+ +SFIS E G+ + + NPISAD Sbjct: 176 FGMELRGRAEADFDLLRAKDLLVSRDYQEVITYSFISPELHKQLDPGRDGVRLANPISAD 235 Query: 541 MSNMRTSLLPGLLK-ATGRNVDRAIADFA 568 MS MRTSL PGLL+ A+ ++V A + +A Sbjct: 236 MSVMRTSLWPGLLQTASLQSVAPAKSGYA 264 >gi|189188380|ref|XP_001930529.1| phenylalanyl-tRNA synthetase beta chain [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187972135|gb|EDU39634.1| phenylalanyl-tRNA synthetase beta chain [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 593 Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 130/595 (21%), Positives = 234/595 (39%), Gaps = 113/595 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SS 212 P + + + NR D + GIA++L V KL + ++ P S E L+IK + Sbjct: 52 PQLKIEIPANRYDMLCFEGIAMNLKVFLEQQKLPKWTVTAPASGELQVLDIKPETKQIRE 111 Query: 213 LCKGFAMCCVK----------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRG 261 LC G + +K +++ + N RQR L ++G + + +Y +L Sbjct: 112 LCSGVVLRGIKFTKERYESFIALQDKLHSNLARQRTLVSIGTHDLDTIKGPFSYEALP-- 169 Query: 262 YPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGR-I 310 +I V L + +G++++ ++ L SP VI R + Sbjct: 170 -------PEQIKFVPLNQEKEMNGKELMEFYEKDKHLGRFLHIIRDSPVYPVIYDSNRTV 222 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 S+ II G H+ +T +V +E+ D + + Sbjct: 223 LSLPPIINGNHSKITLDTKNVFIEITATD---------------------------KTKV 255 Query: 371 PVLKHIVSLILSLCGGTASDICIA--------RNITYKPRKIVFMNSEVKRLSGIDVPIE 422 ++ H++ + + + I I + PR++ + +++G+D+ E Sbjct: 256 EIVNHMLVAMFAGYADSIEPIKITSPHNGESRESPDLSPREMQAEVDYLNQVTGLDLSPE 315 Query: 423 DSLRILERLGFSV-IGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------ 473 + ++L R+G V + DK +VSVP R D+ +AD++E+ YG +++ Sbjct: 316 EISKLLSRMGHDVSPSKSDKNILDVSVPITRADILHQADIMEDYAIAYGFNKLPRVYPNK 375 Query: 474 ----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----G 525 S PLP+ ++ D V+ AS EV+ S E++ + Sbjct: 376 TAAVSAPLPINKLSD------------IVRLESASAGWTEVLPLILCSHEENFEWLNRKD 423 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-----YENDT 580 G+ +++ NP +A+ +RTSLLPGLLK N ++ IFE S V + Sbjct: 424 DGKTAVKLANPKTAEYQLVRTSLLPGLLKTINSNKHHSVP-MKIFEASDVGLVDLEQERK 482 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA +SG E ++ F + D L + L Sbjct: 483 SRNERHFAAAFMGKTSGFE---QVHGLLDRLMLMLRSAFLTREDGLKNEQ----LQGYWI 535 Query: 641 ESGAPSWYHPGRSGIIKTS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + G S IK + +G FG HP++L F L P+ E L+ Sbjct: 536 EEVDDPTFLAGHSAAIKLNLGGKNHTIGVFGILHPSVLQKFELPYPVSTLEFNLE 590 >gi|110598771|ref|ZP_01387031.1| Ferredoxin-fold anticodon-binding [Chlorobium ferrooxidans DSM 13031] gi|110339598|gb|EAT58113.1| Ferredoxin-fold anticodon-binding [Chlorobium ferrooxidans DSM 13031] Length = 331 Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 49/331 (14%) Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 +++ ++ E++ I ++ + LF + + +LNPIS + +R LLPG LK Sbjct: 24 FLRSIMVGLNFREILTNPLIKRDDAALFS--DQLVAVLNPISEGLEVLRPGLLPGFLKVI 81 Query: 557 GRNVDRAIADFAIFEVSHVY------ENDTPEGQKYMAAGIRKGSSGIEGSG----RLWS 606 N+ D FEV+ + E DT + A K + +G R+W Sbjct: 82 SHNIRHGNRDLKFFEVARAFSMLPGSEGDT---NSPLDAYSEKEYLLLAMTGSRFPRIW- 137 Query: 607 DKSEERCRFVDLFDA------KADAL--SVI----EPFVSLDSLRFESGAPSWYHPGRSG 654 ++S E+ F D+ A K + L SV+ E VS+ E G Y R+G Sbjct: 138 NQSPEKADFYDVMGAVEMLLEKLNLLDKSVVNIYNEKTVSIALELTERGKSCSY---RAG 194 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVH--LSS 712 ++K + +LG F G EV++ + + +R +V + S Sbjct: 195 VVKQVEKDLLGKFD----------------IGQEVFIAELDAAVLERCFNPEVTYEPPSR 238 Query: 713 LHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 V+RDL+ ++ Q++ +LV ++++ D LI DV VFD+F+ G++SVA+ + I Sbjct: 239 FPVVQRDLSLVLPQNVTVQSLVEVVRSSDALIRDVCVFDLFERPEAEGGERSVALSLEIA 298 Query: 773 PLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 T +D+ I ++ + N V K AV+R Sbjct: 299 DHTGTLQDERISDILSKAGSNAVSKLGAVIR 329 >gi|330925350|ref|XP_003301016.1| hypothetical protein PTT_12415 [Pyrenophora teres f. teres 0-1] gi|311324579|gb|EFQ90888.1| hypothetical protein PTT_12415 [Pyrenophora teres f. teres 0-1] Length = 593 Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 133/597 (22%), Positives = 241/597 (40%), Gaps = 117/597 (19%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SS 212 P + + + NR D + GIA++L V KL + ++ P S E L+IK + Sbjct: 52 PQLKIEIPANRYDMLCFEGIAMNLKVFLEQQKLPKWTVTAPPSGELQVLDIKPETKQIRE 111 Query: 213 LCKGFAMCCVK----------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRG 261 LC G + +K +++ + N RQR L ++G + + +Y +L Sbjct: 112 LCSGVVLRGIKFTKERYESFIALQDKLHSNLARQRTLVSIGTHDLDTIKGPFSYEALP-- 169 Query: 262 YPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGR-I 310 +I V L + +G++++ ++ L SP VI R + Sbjct: 170 -------PEQIKFVPLNQEKEMNGKELMEFYEKDKHLGRFLHIIRDSPVYPVIYDANRTV 222 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 S+ II G H+ +T +V +E+ D + + Sbjct: 223 LSLPPIINGNHSKITLDTKNVFIEITATD---------------------------KTKV 255 Query: 371 PVLKHIVSLILSLCGGTASDICIARNIT-----------YKPRKIVFMNSEVKRLSGIDV 419 ++ H +++++ G A I + I+ PR++ + +++G+D+ Sbjct: 256 EIVNH---MLVAMFAGYADSIEPIKIISPHNGESRESPDLSPREMQAEVDYLNQVTGLDL 312 Query: 420 PIEDSLRILERLGFSV-IGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--- 473 E+ ++L R+G V + DK +VSVP R D+ +AD++E+ YG +++ Sbjct: 313 SPEEISKLLSRMGHDVSPSKSDKNILDVSVPITRADILHQADIMEDYAIAYGFNKLPRVY 372 Query: 474 -------SEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 S PLP+ ++ D L S T + +L S N+ +++++ Sbjct: 373 PNKTAAVSAPLPINKLSDIVRLESASAGWTEVLPLILCSHEE----NFEWLNRKDD---- 424 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-----YENDT 580 G+ +++ NP +A+ +RTSLLPGLLK N ++ IFE S V + Sbjct: 425 -GKTAVKLANPKTAEYQLVRTSLLPGLLKTINSNKHHSVP-MKIFEASDVGLVDLEQERK 482 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV--DLFDAKADALSVIEPFVSLDSL 638 +++ AA +SG E L +R + F + D L + L Sbjct: 483 SRNERHFAAAFMGKTSGFEQVHGLL-----DRLMLMLQSAFLTREDGLKNEQ----LQGY 533 Query: 639 RFESGAPSWYHPGRSGIIKTS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + G S IK + +G FG HP++L F L P+ E L+ Sbjct: 534 WIEEVDDPTFLAGHSAAIKLNLGGKNHTIGVFGILHPSVLQKFELPYPVSTLEFNLE 590 >gi|254479030|ref|ZP_05092386.1| Ferredoxin-fold anticodon binding domain family protein [Carboxydibrachium pacificum DSM 12653] gi|214035026|gb|EEB75744.1| Ferredoxin-fold anticodon binding domain family protein [Carboxydibrachium pacificum DSM 12653] Length = 160 Score = 85.5 bits (210), Expect = 4e-14, Method: Composition-based stats. Identities = 57/160 (35%), Positives = 87/160 (54%), Gaps = 6/160 (3%) Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 PS YHPGRS I E VLG FGE HP++L+ + L + E+ LD I K Sbjct: 6 PS-YHPGRSAKILFGEE-VLGVFGEVHPDVLENYDLPVRVYAGELNLDKII---KFANVD 60 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKK 763 KK L V+RD+A +VD+ + + +IK R ++ +FDV++G ++ EGKK Sbjct: 61 KKYNPLPKYPAVERDIAVVVDEDLFVAEVEKVIKETGRGFVEKTALFDVYKGPNIPEGKK 120 Query: 764 SVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 SVA + + + T D+++ + RIV+ + +K A LR Sbjct: 121 SVAFSIWYRSYEKTLTDEEVNEVHARIVKALEEKLGAKLR 160 >gi|284162656|ref|YP_003401279.1| phenylalanyl-tRNA synthetase subunit beta [Archaeoglobus profundus DSM 5631] gi|284012653|gb|ADB58606.1| phenylalanyl-tRNA synthetase, beta subunit [Archaeoglobus profundus DSM 5631] Length = 548 Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 140/602 (23%), Positives = 244/602 (40%), Gaps = 90/602 (14%) Query: 117 MMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIAL 176 + E E ++ D +I+E + P+ G D + D +DV PNR D V G+A Sbjct: 6 LYWDELERLVGVDRKTILE---NLPMIG--CDIERVYDDHVDVEFFPNRPDLYSVEGVAR 60 Query: 177 DLVAAGLGKLKEINISCPLSSESIPL-EIKFDLDDSSLC--KGFAMCCVKGVR--NNVAP 231 L ++I + + K +D+S L C V+G++ + + Sbjct: 61 ALRGF-------LDIERGYRHYDVKKGDWKIYVDESVLAVRPYIRGCVVRGLKMSDEIIR 113 Query: 232 NWMR------------QRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVR 279 + M +R A+G+ +S + Y ++D+ + D R V + Sbjct: 114 SLMEVQEDLHWTIGRNRRRMAIGVHDLSKIKFPLTYKAVDKDFSFVPLDFDREMTVEEIL 173 Query: 280 RACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD 339 R K A + D P +++ +DG S II + + TTD+ ++V +D Sbjct: 174 REHPKGKKFAFILEGKDRYP--MIVDADGDAISFPPIINAEKTRVTEKTTDIFIDVTGFD 231 Query: 340 PINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITY 399 K L I+ D G+I V +I T+ D+ Sbjct: 232 ----EYVDKALNILATML------ADRGGVI----ESVEVIYPDKTFTSPDLS------- 270 Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRI-LERLGFSVIGEYDKF-EVSVPSWRQDVEEKA 457 PRK+ E+ L G P ++ +RI LER+ F V DK V VP +R D+ + Sbjct: 271 -PRKMDISKEEIYGLLGFK-PSDEEIRIALERMRFGVEKIDDKIVRVLVPPYRADIMHEW 328 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 D++E+I Y D+I+ E P T K + VK ++ +EV+ ++ + Sbjct: 329 DVIEDIAIGYRYDRIEPE-YPKTMGIGKSH--PWNDLRDVVKEIMIGLGFLEVITFTLTN 385 Query: 518 KEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 + + G + E + ++ P++ D + +RT LLP LL+ N + IFEV Sbjct: 386 ERVQYDWMGRKAEAWKDYVPLMKPLTEDHTIVRTDLLPKLLEVLAVNKHHPMPQ-KIFEV 444 Query: 573 SHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 V G++ RL + + F ++ + + Sbjct: 445 GDV-------------------VVGMKNRLRLACCITHSKANFAEI----RGVVQAVMRE 481 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++LD ESG ++ R+ +I ++ G FGE HP +L+ F ++NP+ GFE+ L Sbjct: 482 LNLDWDVEESGDQAFIEGRRADVIVKGKKV--GVFGEIHPEVLEKFEITNPVVGFELDLT 539 Query: 693 SI 694 I Sbjct: 540 EI 541 >gi|289673307|ref|ZP_06494197.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 155 Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats. Identities = 48/155 (30%), Positives = 87/155 (56%), Gaps = 3/155 (1%) Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 +H+G +T D+ +E A +D I++A ++ G+ TD+ +R+ERGVD Q ++ L Sbjct: 1 EHSGVTASTRDIFLESAFFDTISVAGKARSYGLHTDASHRYERGVDWQLAREAMERATGL 60 Query: 380 ILSLCGGTASDICIARNITYKPR--KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 +L + GG A + + + P + S V+++ G+ + + R+L LG +V Sbjct: 61 LLEITGGEAGPLIEVVSEQHLPSIAPVTLRASRVEQMLGLVIENAEIERLLTGLGLAVTA 120 Query: 438 EYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 E D ++ V VPS R D+ + DL+EE+ R+YG ++ Sbjct: 121 EADGQWRVEVPSHRFDISLEVDLIEELARLYGYNR 155 >gi|193216563|ref|YP_001999805.1| phenylalanyl-tRNA synthetase beta subunit [Mycoplasma arthritidis 158L3-1] gi|193001886|gb|ACF07101.1| phenylalanyl-tRNA synthetase beta subunit [Mycoplasma arthritidis 158L3-1] Length = 728 Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 161/699 (23%), Positives = 277/699 (39%), Gaps = 125/699 (17%) Query: 17 SLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRIDTGKHQE 72 ++E+I + S+G EVE + VL +NP+ D C I D + Sbjct: 18 TIEEIVAAINSLGFEVEDYHRFSDVEGIKFGHVLKTYKNPNADRLTVCEIQFADGMR--- 74 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS----- 127 + A NV + PGS + +K++GI S GM+ S E+ + Sbjct: 75 -TIQTTATNVVDDCYLMAFVPGS--RSKGITFAPKKMQGIVSDGMLASLSEVGFNEQVTP 131 Query: 128 ---DDSASI---MELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA 181 DD I ++L +D P+ Y +L D +IDV++ NR+D +A +L A Sbjct: 132 AEFDDQIFIFNEIDLNLD-PIK-----YFDLDDYMIDVTILSNRADANSYFIMAKELAAY 185 Query: 182 --GLGKLKEINISCPLSSESIPLEIK---------FDLDDSSLCKGFAMCCVKGVRNNVA 230 K N+ P ++ + K F+++ S N Sbjct: 186 FNSYVDFKTENLLLPTTNHELGFSKKLVSTNNILLFEVNLESTDFSLQEQAFLWKHNISV 245 Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 NW+ +I N L G V+DA ++ + SGE L Sbjct: 246 NNWVE---------------NIANLTFLMTGIKPQVYDADKLKNRAFSTELYSGE----L 286 Query: 291 DNQEYDLSPDNVVIASDG-RIQSIAGI--IGGKHAGCDDNTTDVLVEVALWDPINIARSG 347 +E + + ++ DG +I +AGI G D T VL+E++ +D I Sbjct: 287 TIKEQKIVLNKALVLKDGSQIIGLAGIAPFDGYQVAAD--TQRVLIEISSYD---IQSVR 341 Query: 348 KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNIT-YK--PRK 403 KNL + ++ Q I K I S L L + + + N++ YK P++ Sbjct: 342 KNLK---------QSHIETQQTIRNCKEINSAQLVLAYNYMTKNFNLRPNVSLYKAIPKQ 392 Query: 404 --IVFMNSEVKRLSGIDVP-IEDSLRILERL---GFSVIGEYDKFEVSVPSWRQDVEEKA 457 I NS + + +G + ++ L ++E+L GFS + ++ P++R D+ Sbjct: 393 VQIKITNSYLNKYAGFAISKSKNYLAVIEKLKILGFSFSN--NNLNITCPTYRYDLLTAQ 450 Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 D VEE R YG D +P + L Y+K+ LA++ + V +S IS Sbjct: 451 DFVEEFFRFYGYDNFPKKPAKYHEA-----LEAPLLEDAYLKK-LAAKNYINVRTFSLIS 504 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 E++ I NP + +N L+ A+ AI I+ +S+V Sbjct: 505 PEKN-----------IFNPF--NFAN------DYLIPASKNYEHSAIRKSMIYSLSNVML 545 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA-KADALSVIEPFVSLD 636 ++ +G K + + GS ++ L +++ FD K D +S+ Sbjct: 546 HNQKQGMK-VGSYFEIGSISVDHHNVLGIVSNQKT------FDEIKRDLISLTNK----- 593 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 +L F+ S +HP + I +++ GY + HPN+L Sbjct: 594 NLTFKKSINSTFHPNVNCEIYLENKMI-GYIAKIHPNLL 631 >gi|316968451|gb|EFV52729.1| phenylalanyl-tRNA synthetase, beta subunit [Trichinella spiralis] Length = 593 Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 77/298 (25%), Positives = 127/298 (42%), Gaps = 41/298 (13%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 S+V R G+ +P ++L R+G S +G D+ +P R D+ + D++E++ Y Sbjct: 297 SKVNRTIGVKLPSVTIAQLLNRMGISAEVGSEDRVLYKIPPTRHDILHECDIIEDVAIAY 356 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 G + IK E P T D+ L+ T +++ +A E++ +S S+ + Sbjct: 357 GYNNIKKELPPATATGDQLYLN---KITEAMRKEIACAGFTEILTFSLCSRGDVSMKLQQ 413 Query: 528 QREL----EILNPISADMSN---------MRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 EL EI NP + + RT LLPG+LK N D+A+ +FE+ Sbjct: 414 PEELNRAVEIANPKTLEFQASLFMFMHLVARTLLLPGILKTLAHNKDKALP-LKLFEIQD 472 Query: 575 VYENDT------PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 V E D P +++ A +SG E L F+ L + ++ Sbjct: 473 VVERDEYSDCDDPVNRRHFCAVYYGKTSGFETIHGLLD-------HFMRLLEVSSNP--- 522 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 +L E P +Y PGR I E +G+ G HP++ + F L N +C Sbjct: 523 -----ALGYCIKEDLLP-FYFPGRCASIMLRGEKKIGHMGILHPSVCEAFDL-NLVCS 573 >gi|320101043|ref|YP_004176635.1| phenylalanyl-tRNA synthetase subunit beta [Desulfurococcus mucosus DSM 2162] gi|319753395|gb|ADV65153.1| phenylalanyl-tRNA synthetase beta subunit [Desulfurococcus mucosus DSM 2162] Length = 554 Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 25/289 (8%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYG 468 +V RL G+++ +E++L++L++ + V K F V P++R DV+ D+ E+I YG Sbjct: 284 DVSRLLGVELSVEEALKLLQQHYYRVKSVSGKVFSVEAPAYRIDVKTWVDVAEDIAVSYG 343 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGG 527 + + L L + +R ++ +L EV N+ S E Q+ L GGG Sbjct: 344 YHALGGQADSLPPSISVGRLHPLEYASRRIRDILVGMGFTEVSNYMMSSVEAQTSLLGGG 403 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + + NP S + +R+ L PGLL+ N + A+FE+ V P+ + Sbjct: 404 REVFIVENPKSEKYTALRSWLTPGLLETIVENTGKR-PRIAVFEIGDVV---IPDASRET 459 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FESGAP 645 A + + RL S E+ D L+V++ + ++ FE Sbjct: 460 GARVER---------RLCVALSHEKATL-------TDGLAVVKALLRDLGVKPLFEGATI 503 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + GR+ +I+ + V G+ GE P IL G+ NP+ E+ L+ + Sbjct: 504 AGFLQGRTAVIRVDDDNV-GFVGEVEPGILYRLGVVNPVVIAEMVLNKV 551 >gi|312220691|emb|CBY00632.1| similar to phenylalanyl-tRNA synthetase beta chain [Leptosphaeria maculans] Length = 591 Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 133/595 (22%), Positives = 239/595 (40%), Gaps = 115/595 (19%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SS 212 P + + + NR D + GIAL+L V KL + ++ P E LEIK + Sbjct: 52 PQLKIEIPANRYDMLCFEGIALNLKVFLEQQKLPKWTVTRP--QELQVLEIKEETKQIRE 109 Query: 213 LCKGFAMCCVK----------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRG 261 LC G + +K +++ + N R R L ++G + + Y +L Sbjct: 110 LCSGVILRNIKFTQERYDSFIALQDKLHSNLARNRTLVSIGTHDLDTVKGPFTYEALP-- 167 Query: 262 YPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGR-I 310 +I V L + +G++++ +++ L SP VI R + Sbjct: 168 -------PEQIKFVPLNQTKEMNGKELMEFYDKDKHLGRFLHIIRDSPVYPVIYDSNRTV 220 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMI 370 S+ II G H+ NT +VL+E+ D + + Sbjct: 221 LSLPPIINGDHSKITLNTKNVLIEITATD---------------------------KTKV 253 Query: 371 PVLKHIVSLILSLCGGTASDICIARNIT-----------YKPRKIVFMNSEVKRLSGIDV 419 ++ H +++++ G A I + I+ PR+ + ++G+++ Sbjct: 254 EIVNH---MLVAMFAGYAESIEPIQIISPHNGESRESPDLSPREWKVEVDYLNAVTGLNL 310 Query: 420 PIEDSLRILERLGFSVI-GEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--- 473 E+ ++L R+G V + DK +VSVP R D+ +AD++E+ YG +++ Sbjct: 311 APEEISKLLSRMGHDVSPSKTDKNILDVSVPITRADILHQADIMEDYAIAYGFNKLPRYY 370 Query: 474 -------SEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 S PLP+ ++ D L S T + +L S N+ +++++ Sbjct: 371 PNKTAAVSAPLPINKLADIVRLESAAAGWTEVMPLILCSHEE----NFEWLNRKDD---- 422 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-----YENDT 580 G +++ NP +A+ +RTSLLPGLLK N ++ IFEVS + + Sbjct: 423 -GNMAIKLANPKTAEYQLVRTSLLPGLLKTINSNKHHSVP-MKIFEVSDIGLIDMQQERK 480 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA I +SG E ++ +F + D L + L+ Sbjct: 481 SRNERHFAAAIMGKTSGFE---QVHGLLDRLMLMLRSVFLTREDGLKNEQ----LNGYWI 533 Query: 641 ESGAPSWYHPGRSGIIKTSAE---IVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + G + IK + E +G FG HP +L F L P+ E L+ Sbjct: 534 EEVEDDTFLAGHAAAIKVNIEGKNHTIGVFGILHPTVLHKFELPYPVSTLEFNLE 588 >gi|261884885|ref|ZP_06008924.1| phenylalanyl-tRNA synthetase subunit beta [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 322 Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 15/266 (5%) Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARS--GKNLGIITDSRYRFE 361 + SDG+ AGI A D+ + +++E + +P IA + G D+ YR Sbjct: 57 VYSDGKCLGQAGIWQTDEARLDECSRVIIIEASYTEPDVIASAIGGDKKQPKDDATYRSS 116 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIA---RNITYKPRKIVFMNS-EVKRLSGI 417 RG + P L + L+ L A + + K + IV N E+ + G Sbjct: 117 RGSE-----PKLSIGMDLLFDLFSKNKKIAPYAGAQQILLEKEQTIVSFNCPEICNMIGS 171 Query: 418 DVPIEDSLRILERLGFSVIG--EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 ++ D ++IL++LGF + E ++ VP +R D+ D+ EEI+RI G+D I S Sbjct: 172 EISRNDVIKILKKLGFDITFNVEQEQIYARVPFYRHDIRNTHDICEEIVRIIGIDNIPST 231 Query: 476 PLPLTQVEDKRNLSLQQSR-TRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 PL ++ +++ N + + + ++ ++ A E V++ F + E+ G EIL Sbjct: 232 PLIFSE-KNRINPTFESYKHSKDLRHKAAMAGFFECVHYIFDNAEELEALGFKPSRTEIL 290 Query: 535 NPISADMSNMRTSLLPGLLKATGRNV 560 NPI+ +++ ++ +L+ LL + RNV Sbjct: 291 NPINNELAVLKPTLINHLLNSCERNV 316 >gi|259481326|tpe|CBF74738.1| TPA: phenylalanyl-tRNA synthetase, beta subunit (AFU_orthologue; AFUA_1G05620) [Aspergillus nidulans FGSC A4] Length = 600 Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 131/590 (22%), Positives = 239/590 (40%), Gaps = 94/590 (15%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SS 212 P + + + NR D + GIAL L + G L + + P S E + +K D Sbjct: 54 PQLKIEIPANRYDLLCFEGIALMLNIFLGRKPLPKYRLVEPPSGELQKIIVKEDTSKIRP 113 Query: 213 LCKGFAMCCVK----------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD-- 259 L G + V +++ + N RQR L ++G + + +Y +L Sbjct: 114 LVSGAILRNVTFDKARYESFIALQDKLHQNLARQRTLVSIGTHDLDTIKGPFSYEALPPK 173 Query: 260 --RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVIASDG 308 R P L + GE+++A +++ L SP VI Sbjct: 174 DIRFVP------------LNQTKEMDGEELMAFYDKDKHLGRYLHIIRDSPVYPVIYDAN 221 Query: 309 R-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 R + S+ II G+H+ NT +V +E+ D + K + + S+Y E Sbjct: 222 RTVCSLPPIINGEHSKITLNTKNVFIEITALDKTKVEIVNK-IMVSMFSQYTSE------ 274 Query: 368 GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRI 427 P V +I T IA PR S + + G+ + E+ R+ Sbjct: 275 ---PFTVEPVQIISEHNNETRVTPDIA------PRTTQAEVSYINQCCGLQLSAEEICRL 325 Query: 428 LERLGFSVIGEY---DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------S 474 L ++ + D +V +P R D+ +AD++E++ YG + + + Sbjct: 326 LTKMAYEATPSSTSPDLIDVHIPPTRADILHQADIMEDVAIAYGFNNLPRSFPSKSGTVA 385 Query: 475 EPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 +PLP+ ++ D R + + + +L S N+++++++ G +++ Sbjct: 386 QPLPINKLSDIIRTEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD-----GNTAVKL 436 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQKYMA 588 NP + + +RTSLLPGLLK N ++ IFEVS V D +++ A Sbjct: 437 ANPKTQEFQVVRTSLLPGLLKTIRENKSHSVP-MKIFEVSDVAFKDLSMERKSRNERHFA 495 Query: 589 AGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A +SG E G L S + F+ + + + +V + ++ L P++ Sbjct: 496 AAWYSKTSGFEVVHGLLDRIMSMLKSAFI-IGEEGLENAAVKDSQYWIEEL----DDPTY 550 Query: 648 YHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +H G S I + +G FG HP +L+ +GL P+ E+ +++ Sbjct: 551 FH-GHSASIHVRIAGKDHTIGTFGILHPTVLENYGLKYPVSTLEINIETF 599 >gi|149002259|ref|ZP_01827201.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|147759574|gb|EDK66565.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 183 Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 62/177 (35%), Positives = 95/177 (53%), Gaps = 14/177 (7%) Query: 91 APPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD------SASIMELPIDAPVGG 144 A PG+ I +N I KIRG+ES GM+CS EL +SD + I LP DA G Sbjct: 3 ALPGARIADNYKIKK-GKIRGLESLGMICSLGELGISDSVVPKEFADGIQILPEDAVPGE 61 Query: 145 RLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGK---LKEINISCPLSSESIP 201 + YL+L D II++S+TPNR+D + + G+A + VAA K KE ++ + + Sbjct: 62 EVFSYLDLDDEIIELSITPNRADALSMCGVAHE-VAAIYDKAVNFKEFTLTETNEAAADA 120 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSL 258 L + + D + +A + V +P W++ L G+R I+ +VD+TNY+ L Sbjct: 121 LSVSIETDKAPY---YAARILDNVTIAPSPQWLQNLLMNEGIRPINNVVDVTNYILL 174 >gi|169617477|ref|XP_001802153.1| hypothetical protein SNOG_11918 [Phaeosphaeria nodorum SN15] gi|160703419|gb|EAT80962.2| hypothetical protein SNOG_11918 [Phaeosphaeria nodorum SN15] Length = 614 Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 135/600 (22%), Positives = 245/600 (40%), Gaps = 102/600 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDD-SS 212 P + + + NR D + GIA++L V KL + +++ P E L+IK + + Sbjct: 52 PQLKIEIPANRYDMLCFEGIAMNLKVFLEQQKLPKWSLTAPKDGELQVLDIKKETEQIRP 111 Query: 213 LCKGFAMCCVK----------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD-- 259 LC G + ++ +++ + N R R L ++G + + +Y +L Sbjct: 112 LCSGVILRNIEFTQERYDSFIALQDKLHANLARNRTLVSIGTHDLDTIKGPFSYEALAPE 171 Query: 260 --RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL--SPDNVVIASDGR-IQSIA 314 P + +++ A + +K L + + SP VI R + S+ Sbjct: 172 QIEFIPLNQTKKMNGKELMEFYDANTAQKDKHLGRFLHIIRDSPVYPVIYDSNRTVLSLP 231 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 II G H+ NT +VL+E+ D + + ++ Sbjct: 232 PIINGDHSKITLNTKNVLIEITALD---------------------------KTKVEIVN 264 Query: 375 HIVSLILSLCGGTASDI-CIARNITYK----------PRKIVFMNSEVKRLSGIDVPIED 423 H +++++ G A I + N + PR++ + +++G+ + E+ Sbjct: 265 H---MLVAMFAGYAESIEALKINSPHNNESREAPDLSPREMQAEVDYLNQVTGLSLQPEE 321 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L ++G V + + +VSVP R D+ +AD++E+ YG +++ Sbjct: 322 ISKLLSKMGHDVKPSTSDPNILDVSVPVTRADILHQADIMEDYAIAYGFNKLPRVYPNKT 381 Query: 474 ---SEPLPLTQVEDKRNL-SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 S PLP+ ++ D L S T + +L S N+ ++++ G+ Sbjct: 382 AAVSAPLPINKLADIVRLESAAAGWTEVMPLILCSHEE----NFEWLNR-----VDDGKT 432 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-----YENDTPEGQ 584 +++ NP +A+ +RTSLLPGLLK N A+ IFEVS V + + Sbjct: 433 AVKLANPKTAEYQLVRTSLLPGLLKTINSNKHHAVP-MKIFEVSDVGFIDLEQERKSRNE 491 Query: 585 KYMAAGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDA-KADALS--VIEPF-----VSL 635 ++ AA I +SG E G L R F+ D K D L IE + Sbjct: 492 RHFAAAIMGKTSGFEQVHGLLDRVMLMLRSAFITREDGMKNDKLEGYWIEEVDGKSNSAY 551 Query: 636 DSLRFESGAPSWYHPGRSGIIKTS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 D + A + PG + IK + +G FG HP++L F L P+ E+ L+ Sbjct: 552 DEINANMMADPTFLPGHAAAIKLNLGGKNHTIGVFGILHPSVLGKFELPYPVSTVEINLE 611 >gi|167948156|ref|ZP_02535230.1| phenylalanyl-tRNA synthetase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 202 Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 63/182 (34%), Positives = 95/182 (52%), Gaps = 20/182 (10%) Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 I +P +I+ + ++RL GI++ ++ IL RL E + V+ PS R D+ Sbjct: 9 KIEARP-QILLRHQRIQRLLGIEISTDEVEDILSRLEMQFSVEEGGWLVTAPSCRFDISI 67 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY--------VKRVLASRAM 507 +ADL+EE+ RIYG +I + +R + R R K +L SR Sbjct: 68 EADLIEEVGRIYGYARIPT----------RRGAFGMELRGRAEADFDLLRAKDLLVSRDY 117 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLK-ATGRNVDRAIAD 566 EV+ +SFIS E G+ + + NPISADMS MRTSL PGLL+ A+ ++V A + Sbjct: 118 QEVITYSFISPELHKQLDPGRDGVRLANPISADMSVMRTSLWPGLLQTASLQSVAPAKSG 177 Query: 567 FA 568 +A Sbjct: 178 YA 179 >gi|154284748|ref|XP_001543169.1| phenylalanyl-tRNA synthetase [Ajellomyces capsulatus NAm1] gi|150406810|gb|EDN02351.1| phenylalanyl-tRNA synthetase [Ajellomyces capsulatus NAm1] Length = 631 Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 150/638 (23%), Positives = 253/638 (39%), Gaps = 116/638 (18%) Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 E +C E L L +D+ + +E P V G+ P + + + NR D + + Sbjct: 53 EEFDQLCFEFGLELDEDTEN-LERPF---VNGKQEP------PQLKIEVPANRYDLLCIE 102 Query: 173 GIAL--------------DLVAAGLGKLKEINIS------CPLSSESIPLEIKFDLDDSS 212 GIAL LVA G+L+ I + P S +I I FD + Sbjct: 103 GIALMLNIFRERTLSPEYRLVAPSNGELETIVVKEETMKIRPYISGAILRNIHFD---QA 159 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + F +++ + N RQR L A+G + L Y +L S V Sbjct: 160 RYESFI-----ALQDKLHQNLARQRTLVAIGTHDLDKLKGPFTYEALPPKDISFV----- 209 Query: 272 ISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGRIQ-SIAGIIGGKH 321 L R +G++++ ++ + SP VI R+ S+ II G H Sbjct: 210 ---PLNQTRKMNGQEMMEFYEKDKHIGKYLHIIRDSPVYPVIYDSNRVVCSLPPIINGDH 266 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 + NT +V +E D + N+ + S+Y E P V ++ Sbjct: 267 SKITLNTKNVFLEYTATDKTKVEIVN-NIMVTMFSQYTSE---------PFTVEPVRIVS 316 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGE 438 S T + +PR S + + G+ + D +L+R+ + Sbjct: 317 SHNNETR------QTPDLRPRPTQASISYINQCCGLSLSAADICNLLKRMSYFAEPSKTS 370 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SEPLPLTQVEDK-RN 487 D +V VP R DV +AD++E++ YG +++ + PLP+ ++ D R Sbjct: 371 PDLVDVRVPVTRADVLHQADIMEDVAIAYGFNELPRYFPNISGTIARPLPINKLTDIIRT 430 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTS 547 + + + +L S N+++++++ G +++ NP + + +RTS Sbjct: 431 EAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNTAVKLANPKTVEFQVVRTS 481 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIE-GS 601 LLPGLLK G N AI IFEVS V D +++ AA +SG E Sbjct: 482 LLPGLLKTIGENKHHAIP-MKIFEVSDVAFKDVSRERKSTNERHFAAAWYGKTSGFEIVH 540 Query: 602 GRLWSDKSEERCRFV---DLFD--AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G L + + F+ + D A +A IE LD + +G + H SG Sbjct: 541 GLLDRIMAMLKTAFIIGEEGLDNPAMGNASYWIE---ELDDPTYFTGHAASVHVRISG-- 595 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + V+G FG HP +L F L P+ E+ +++ Sbjct: 596 ---KDHVVGSFGILHPTVLGKFDLKYPVSTLEINIETF 630 >gi|153875699|ref|ZP_02003383.1| phenylalanyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] gi|152067836|gb|EDN66616.1| phenylalanyl-tRNA synthetase, beta subunit [Beggiatoa sp. PS] Length = 174 Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 9/170 (5%) Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIP 695 ++ RF HPG++ I + +LG G HPN++ GL+ P+ FE+ L + Sbjct: 11 EAYRFIPATHPALHPGQTAAIY-RGDSLLGLVGAIHPNLVQTLGLTAPVYLFELRLTPLL 69 Query: 696 ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN--VDRLIDDVTVFDVF 753 +Q K +S ++RD+A +V + I A L++ IK D LID ++FDV+ Sbjct: 70 TTQVPTFK-----EISKYPSLRRDIAVVVSKDISATQLIDCIKQSATDILID-WSLFDVY 123 Query: 754 QGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 QGK + +KS+AI ++ Q D ++ +++IV + +K A LR Sbjct: 124 QGKGIEPTQKSIAIGLIFQAFSRNLTDSEVDNFVEQIVSTLEQKLGATLR 173 >gi|327400736|ref|YP_004341575.1| Phenylalanyl-tRNA synthetase subunit beta [Archaeoglobus veneficus SNP6] gi|327316244|gb|AEA46860.1| Phenylalanyl-tRNA synthetase beta chain [Archaeoglobus veneficus SNP6] Length = 548 Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 122/567 (21%), Positives = 219/567 (38%), Gaps = 95/567 (16%) Query: 157 IDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS 211 +DV PNR D V G+A L + G + + + + E LE++ Sbjct: 41 VDVEFFPNRPDLYSVEGVARALRGFLDIEHGYKEYQAKSADWKIVVEPAVLEVR------ 94 Query: 212 SLCKGFAMCCVKGVR--NNVAPNWM-----------RQRLK-AVGLRSISALVDITNYVS 257 C V+ ++ + V + M R R K A+G+ +S + Y + Sbjct: 95 ---PRIVGCVVRNLKITDEVIRSLMEVQEDLHWTIGRNRRKMAIGVHDLSKVYFPLRYTA 151 Query: 258 LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGII 317 +D + D S V + K + D P +++ S + S +I Sbjct: 152 VDSSFSFVPLDFSEEMSVAEILEKHPKGKEYRFILEGKDRYP--MILDSKNEVISFPPVI 209 Query: 318 GGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIV 377 + + TTD+ ++V +D N+ ++ L + R V++ Sbjct: 210 NAEKTRVTERTTDLFIDVTGFDE-NVDKALSILATMLADRGGIIESVEI----------- 257 Query: 378 SLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 T D P+++V E+ L G ++ +D LER+ F V Sbjct: 258 ---------TYPDGRTELTPDLSPKRMVVSKDEIYALLGFEMSDDDIKLALERMRFGVGR 308 Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 + EV VP +R D+ + D++E+I YG D+I+ E P + N + + R Sbjct: 309 IDESVEVLVPPYRADIMHEWDIIEDIAIGYGYDRIEPEYPPTNAIGTTHNWNEMREIAR- 367 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE-------ILNPISADMSNMRTSLLP 550 V+ +EV+ +F + V + +R E +++P++ D + +RT +LP Sbjct: 368 --EVMIGLGYLEVI--TFTLTNERVQYEYMRRSGEAWKDYTPLMHPLTEDHTIVRTDILP 423 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 LL+ N A+ IFEV V G + RL + + Sbjct: 424 KLLELLSYNTHHAMPQ-RIFEVGDV-------------------VVGTKNRLRLAACSTH 463 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYF 667 R F A+ SV++ + L + ES ++ R+ I+ ++ G F Sbjct: 464 ARANF-------AEIRSVVQAVMRELDLEWSVAESSDDAFIEGRRADIVVDGKKV--GVF 514 Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSI 694 GE HP +L+ F L+ P+ FE+ L + Sbjct: 515 GEIHPEVLENFKLATPVVAFELDLSEL 541 >gi|328479710|gb|EGF48861.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus MTCC 5462] Length = 162 Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 3/146 (2%) Query: 194 PLSSESIPLE--IKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVD 251 PL+ P+ + ++ D+ + + + V +P W+++RL G+R I+ +VD Sbjct: 6 PLTEGDRPVADYLSAEVKDAQDAPSYQLRVIDHVTVKESPLWLQRRLWNAGVRPINNIVD 65 Query: 252 ITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRI 310 ITN++ L G P H FD +++ S + VRRA +GE + LD E++L ++VI + Sbjct: 66 ITNFIMLAYGQPLHAFDYAKLGSQHIEVRRARNGEPLTTLDGGEHELDDSDIVITNGQVP 125 Query: 311 QSIAGIIGGKHAGCDDNTTDVLVEVA 336 ++AG++GG + TT V+VE A Sbjct: 126 VALAGVMGGLDSEISGTTTTVVVEAA 151 >gi|302831187|ref|XP_002947159.1| hypothetical protein VOLCADRAFT_120443 [Volvox carteri f. nagariensis] gi|300267566|gb|EFJ51749.1| hypothetical protein VOLCADRAFT_120443 [Volvox carteri f. nagariensis] Length = 667 Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 82/323 (25%), Positives = 136/323 (42%), Gaps = 55/323 (17%) Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLV 460 R + V L G+ +P E+ +++L ++ + +G+ + V VP R D+ D+ Sbjct: 343 RSLTLTTDYVNSLLGLQLPGEEIVKLLTKMQVAAELGDGKELTVRVPPTRSDILHACDVA 402 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 E++ +G + I +P T + R L L Q T ++ +A EV+ W+ +S+ + Sbjct: 403 EDVAIAHGYNNIPKR-IPPTATQG-RELPLNQ-LTELLRAEVAMAGFTEVLTWALVSRAE 459 Query: 521 SVLFGGGQR------ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + F +R +EI NP +A+ R+SLL LK N D A+ +FEVS Sbjct: 460 N--FENMRRPDDGCTAVEIGNPATAEFEVCRSSLLSSALKTLAANKDNALP-IKLFEVSD 516 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 D + + G R ER R V ++ AK +I ++ Sbjct: 517 AIMLD-----ESRSVGARN-----------------ER-RLVAVYCAKESGFEIIHGLLN 553 Query: 635 --LDSL-------RFESGAPSWYH----------PGRSGIIKTSAEIVLGYFGEFHPNIL 675 +D L +GAP YH PGR I T + +G FG HP +L Sbjct: 554 RVMDVLGVPYKEDPVSAGAPVTYHWSPSADPALFPGRQAAIFTGKDAQVGVFGIVHPEVL 613 Query: 676 DFFGLSNPICGFEVYLDSIPISQ 698 F + P+ E+ L+ +Q Sbjct: 614 AAFDVPYPVSALELNLEPFVFNQ 636 >gi|67527618|ref|XP_661690.1| hypothetical protein AN4086.2 [Aspergillus nidulans FGSC A4] gi|40739784|gb|EAA58974.1| hypothetical protein AN4086.2 [Aspergillus nidulans FGSC A4] Length = 570 Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 102/452 (22%), Positives = 190/452 (42%), Gaps = 65/452 (14%) Query: 276 LTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGR-IQSIAGIIGGKHAGCD 325 L + GE+++A +++ L SP VI R + S+ II G+H+ Sbjct: 150 LNQTKEMDGEELMAFYDKDKHLGRYLHIIRDSPVYPVIYDANRTVCSLPPIINGEHSKIT 209 Query: 326 DNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCG 385 NT +V +E+ D + K + + S+Y E P V +I Sbjct: 210 LNTKNVFIEITALDKTKVEIVNK-IMVSMFSQYTSE---------PFTVEPVQIISEHNN 259 Query: 386 GTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEY---DKF 442 T IA PR S + + G+ + E+ R+L ++ + D Sbjct: 260 ETRVTPDIA------PRTTQAEVSYINQCCGLQLSAEEICRLLTKMAYEATPSSTSPDLI 313 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SEPLPLTQVEDK-RNLSLQ 491 +V +P R D+ +AD++E++ YG + + ++PLP+ ++ D R + Sbjct: 314 DVHIPPTRADILHQADIMEDVAIAYGFNNLPRSFPSKSGTVAQPLPINKLSDIIRTEAAM 373 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 + + +L S N+++++++ G +++ NP + + +RTSLLPG Sbjct: 374 AGWSEVLPLILCSHDE----NFAWLNRKDD-----GNTAVKLANPKTQEFQVVRTSLLPG 424 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQKYMAAGIRKGSSGIEG-SGRLW 605 LLK N ++ IFEVS V D +++ AA +SG E G L Sbjct: 425 LLKTIRENKSHSVP-MKIFEVSDVAFKDLSMERKSRNERHFAAAWYSKTSGFEVVHGLLD 483 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIK---TSAEI 662 S + F+ + + + +V + ++ L P+++H G S I + Sbjct: 484 RIMSMLKSAFI-IGEEGLENAAVKDSQYWIEEL----DDPTYFH-GHSASIHVRIAGKDH 537 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +G FG HP +L+ +GL P+ E+ +++ Sbjct: 538 TIGTFGILHPTVLENYGLKYPVSTLEINIETF 569 >gi|212223541|ref|YP_002306777.1| phenylalanyl-tRNA synthetase subunit beta [Thermococcus onnurineus NA1] gi|229558067|sp|B6YTJ3|SYFB_THEON RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|212008498|gb|ACJ15880.1| phenylalanyl-tRNA synthetase, beta subunit [Thermococcus onnurineus NA1] Length = 572 Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 101/407 (24%), Positives = 177/407 (43%), Gaps = 61/407 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +++ S+G + S+ II + G T +V V+V WD +N N+ + + Sbjct: 201 LLVDSEGNVLSMPPIINSELTGRVTTETRNVFVDVTGWD-LNKIMLALNVVVTALA---- 255 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSEVKRLSGIDV 419 ERG G I +K + D I N+T K ++ F ++RL+GID+ Sbjct: 256 ERG----GKIKSVKVVYG-----------DFEIETPNLTPKEFEVEF--EYIRRLAGIDL 298 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+ +LER+ + V E K ++ P++R D+ D++E++L YG ++IK E P Sbjct: 299 SDEEIKELLERMFYEVELENGKAKLKYPAFRDDIMHARDVLEDVLIAYGYNEIKPEE-PK 357 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL-----FGGG------- 527 V+ + + ++ T V+ ++ + EV+ ++ ++E FG Sbjct: 358 LAVQGRGDKFVEFEDT--VRELMVGYGLQEVMTFNLTNREAQYTKMNLDFGEHPFEEYGH 415 Query: 528 ---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 R +EI NPIS S +R L+P L++ +N IFEV Sbjct: 416 HPPARLVEIENPISPKWSALRAWLIPSLMEFLSQNTHEEYPQ-RIFEVG----------- 463 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 K K + + S +L + R F ++ + + + L + S Sbjct: 464 KTTLINENKETKTVSES-KLAVAIAHPRVTFTEVKEILDSVMHHLGLEYELKEIEHNS-- 520 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + PGR G I + + V G GE HP +L+ +G+ P+ FEV+L Sbjct: 521 ---FIPGRVGKIIVNGQEV-GIIGEIHPKVLENWGIEMPVAAFEVFL 563 >gi|315055211|ref|XP_003176980.1| phenylalanyl-tRNA synthetase subunit beta [Arthroderma gypseum CBS 118893] gi|311338826|gb|EFQ98028.1| phenylalanyl-tRNA synthetase subunit beta [Arthroderma gypseum CBS 118893] Length = 600 Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 79/330 (23%), Positives = 146/330 (44%), Gaps = 59/330 (17%) Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVE 454 T KPR S + R +G+ + D+ ++L+++ S + E D +V++P R DV Sbjct: 296 TLKPRTTQASISYINRCTGLSLSGPDACQLLKKMSLSAKVSEKSEDTLDVTIPVTRADVL 355 Query: 455 EKADLVEEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLAS 504 +AD++E+I +G +++ ++PLP+ ++ D ++ A Sbjct: 356 HQADIMEDIAIAHGFNELPKSFPSKSGTIAQPLPINKLGD------------IIRGEAAM 403 Query: 505 RAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 EV+ ++ S +++ + G+ +++ NP + + +RTSL+PGLLK N Sbjct: 404 AGWTEVLTFALCSHDENFAWVNRKDDGKTAIKLANPKTVEFQVVRTSLMPGLLKTIRENK 463 Query: 561 DRAIADFAIFEVSHVYEND-----TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 + ++ IFEVS V D +++ AA +SG E L DK Sbjct: 464 NHSLP-IKIFEVSDVGLKDLSLERKSRNERHFAAAWYGKTSGFEVVHGLL-DK------- 514 Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSW--------YHPGRSGIIKT---SAEIVL 664 + A V E + +++ G+ W Y PG + + E ++ Sbjct: 515 --VMMMMKSAFIVGEEGLDNAAVK---GSQYWIEELNDPTYFPGHAASVHLRMDGKESII 569 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G FG HP +LD F L P+ E+ ++S+ Sbjct: 570 GSFGILHPTVLDNFDLKYPVSALEINIESL 599 >gi|218883502|ref|YP_002427884.1| phenylalanyl-tRNA synthetase subunit beta [Desulfurococcus kamchatkensis 1221n] gi|218765118|gb|ACL10517.1| phenylalanyl-tRNA synthetase subunit beta [Desulfurococcus kamchatkensis 1221n] Length = 557 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 104/410 (25%), Positives = 174/410 (42%), Gaps = 69/410 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP-----------INIARSGKNL 350 V++ S+G I S+A I+ NT ++L++ +P +NIA KN Sbjct: 193 VLMDSEGTILSLAPILNSDDNKVTTNTRNILIDSTGLNPEIVVDMVTIMAVNIAERSKN- 251 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE 410 R +++ G ++H LI+ T + I + N+ S+ Sbjct: 252 -----------RIIEVVG----VEHPSGLIIEAPRRTGNFISV--NL-----------SD 283 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V RL G+D+ +ED++R L ++V E V P +R D D+ E+I +G Sbjct: 284 VSRLIGVDISVEDAVRYLSLHYYTVRSIEGRVLTVEAPIYRLDARSWVDVAEDIAISHGY 343 Query: 470 DQI--KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGG 526 D I +++ LP + K + + +R V+ +L +E+ N+ S E Q+ L G Sbjct: 344 DAIGRQADSLPYSTSIGK--IHPLEYISRRVRDILVGLGFIEIANYMMTSIESQTTLMGY 401 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 Q + NP S + +R+ L PG+++A N + A A+FE+ V P+ Sbjct: 402 NQGIFVVENPKSDRYTAIRSWLTPGIIEAIIENKGKR-ARLAVFEIGDVV---LPDESME 457 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLD-SLRFESGA 644 A + + R+ S E+ D L+V+ F L +L FE Sbjct: 458 TNARVER---------RIGIAVSHEKATL-------TDGLAVVRTLFKELGVTLSFEKTM 501 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 P R+ I + E + G+ GE P IL GL NP+ E+ L+ I Sbjct: 502 VPGLLPERTAAINVNGEQI-GFVGEVKPEILYKLGLMNPVIVSEINLNKI 550 >gi|83764703|dbj|BAE54847.1| unnamed protein product [Aspergillus oryzae] Length = 589 Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 132/596 (22%), Positives = 241/596 (40%), Gaps = 106/596 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GIAL LV G+L++I + P Sbjct: 43 PQLKIEIPANRYDMLCFEGIALMLNIFLGRKSLPNYRLVEPANGELQKIIVKEDTTKIRP 102 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 103 LVSGAILRNIKFD---QARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 144 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE+++A ++ L SP Sbjct: 145 H-DLDTIQGPFTYEALPPKDIKFVPLNQTQEMNGEELMAFYEKDKHLGRYLHIIRDSPVY 203 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +V +E+ D + K + + S+Y Sbjct: 204 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVFIEITALDKTKVEIVNK-MMVAMFSQYTS 262 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 E P V ++ G T ++ T ++ ++N + G+++ Sbjct: 263 E---------PFTIEPVQIVSDHNGETRITPDMSSRTTQA--EVSYLN----QCCGLNLS 307 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 E+ +IL ++ ++ D +V +P R DV +AD++E++ YG + + Sbjct: 308 AEEIAKILTKMAYTARPSAESADLIDVDIPPTRADVLHQADIMEDVAIAYGFNNLPRSFP 367 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 368 SKSGTIAQPLPINKLSDIVRTEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD----- 418 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N ++ IFEVS V D Sbjct: 419 GNTAVKLANPKTLEFQVVRTSLLPGLLKTIRENKHHSVP-MKIFEVSDVAFKDLSLERKS 477 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E L D+ + F + L +P +S E Sbjct: 478 RNERHFAAAWYGKNSGFEVVHGLL-DRVMAMLK--SAFITGEEGLE--KPGMSDSQYWIE 532 Query: 642 SGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + Y PG + + E V+G FG HP +L+ + L P+ E+ +++ Sbjct: 533 ELDEATYFPGHAASVHLRIGGKEHVIGAFGILHPTVLEKYELKYPVSTLELNIEAF 588 >gi|238503976|ref|XP_002383220.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus flavus NRRL3357] gi|317138356|ref|XP_001816849.2| phenylalanine--tRNA ligase subunit beta [Aspergillus oryzae RIB40] gi|220690691|gb|EED47040.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus flavus NRRL3357] Length = 600 Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 132/596 (22%), Positives = 241/596 (40%), Gaps = 106/596 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GIAL LV G+L++I + P Sbjct: 54 PQLKIEIPANRYDMLCFEGIALMLNIFLGRKSLPNYRLVEPANGELQKIIVKEDTTKIRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 114 LVSGAILRNIKFD---QARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 155 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE+++A ++ L SP Sbjct: 156 H-DLDTIQGPFTYEALPPKDIKFVPLNQTQEMNGEELMAFYEKDKHLGRYLHIIRDSPVY 214 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +V +E+ D + K + + S+Y Sbjct: 215 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVFIEITALDKTKVEIVNK-MMVAMFSQYTS 273 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 E P V ++ G T ++ T ++ ++N + G+++ Sbjct: 274 E---------PFTIEPVQIVSDHNGETRITPDMSSRTTQA--EVSYLN----QCCGLNLS 318 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 E+ +IL ++ ++ D +V +P R DV +AD++E++ YG + + Sbjct: 319 AEEIAKILTKMAYTARPSAESADLIDVDIPPTRADVLHQADIMEDVAIAYGFNNLPRSFP 378 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 379 SKSGTIAQPLPINKLSDIVRTEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD----- 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N ++ IFEVS V D Sbjct: 430 GNTAVKLANPKTLEFQVVRTSLLPGLLKTIRENKHHSVP-MKIFEVSDVAFKDLSLERKS 488 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E L D+ + F + L +P +S E Sbjct: 489 RNERHFAAAWYGKNSGFEVVHGLL-DRVMAMLK--SAFITGEEGLE--KPGMSDSQYWIE 543 Query: 642 SGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + Y PG + + E V+G FG HP +L+ + L P+ E+ +++ Sbjct: 544 ELDEATYFPGHAASVHLRIGGKEHVIGAFGILHPTVLEKYELKYPVSTLELNIEAF 599 >gi|307354702|ref|YP_003895753.1| phenylalanyl-tRNA synthetase subunit beta [Methanoplanus petrolearius DSM 11571] gi|307157935|gb|ADN37315.1| phenylalanyl-tRNA synthetase, beta subunit [Methanoplanus petrolearius DSM 11571] Length = 537 Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 130/579 (22%), Positives = 235/579 (40%), Gaps = 110/579 (18%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDL-----VAAGLG---------------KL 186 SD + + IDV PNR D V G+A + + GL KL Sbjct: 31 SDVERIEEDQIDVEFFPNRPDLFSVEGVARSMRGFLGIETGLPEYNVEPGNTEFSVDPKL 90 Query: 187 KEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK-AVGLRS 245 +I P +I +IKFD D+S + C+ G++ ++ R R K A+G+ Sbjct: 91 ADIR---PYLGSAIIRDIKFD-DES-------IECLMGLQESLHWAVGRGRAKVAIGVHD 139 Query: 246 ISALVDITNYVS--LDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVV 303 + + +Y++ DR + FD + + ++ G L +E L P ++ Sbjct: 140 LDKVKAPFSYIASPRDRKFVPLDFDRDMTMEQM-LKEHPKGIDYAHL-VEEKPLFP--LI 195 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 + +D + S II G+ +T ++L++ G Sbjct: 196 VDADDNVLSFPPIINGELTRVTKDTKNILLDCT--------------------------G 229 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICI----ARNITYKPRKIVFMNSEVKRLSGIDV 419 D + ++ +K I+ ++ GG + + +++ R++ E +L G+ + Sbjct: 230 TDERAVMTAVK-IICTAMAEAGGRIETVNVNGTSMPDLSPSERRVDV--DECNKLLGLSL 286 Query: 420 PIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + +LE++ F + + +V+VP +R D+ D+ E++ YG + + +E LP Sbjct: 287 TPAEMAELLEKMRFGAVPDGKSHVKVTVPCYRSDILHDWDIYEDVAIAYGYENVPAE-LP 345 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEI 533 T K S Q + ++ ++A ME++ F + VL+ QRE L + Sbjct: 346 PTFTIGKE--SPVQRKLGTIREIMAGLGYMEIM--PFTLSNEKVLYDNMQRERKTEALSL 401 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 ++PIS D + +RT +LP L++ N R + +F V EN +K Sbjct: 402 MHPISEDHTLVRTDILPLLMETLKLNQHRELPQ-RLFAAGDVVEN---------VQTFQK 451 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGR 652 ++ I + F +++ A AD L LD E + Y GR Sbjct: 452 AAAVIMHT----------EADFTEIYSA-ADVL-----LRELDLEYTVEDSSDPAYIKGR 495 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 G I + + G FGE HP ++ F + PI G E+ L Sbjct: 496 CGDIYVDGKKI-GSFGEIHPQVILNFDMDQPIAGLEIDL 533 >gi|225556723|gb|EEH05011.1| phenylalanyl-tRNA synthetase subunit beta [Ajellomyces capsulatus G186AR] Length = 600 Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 148/638 (23%), Positives = 254/638 (39%), Gaps = 116/638 (18%) Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 E +C E L L +D+ + +E P V G+ P + + + NR D + + Sbjct: 22 EEFDQLCFEFGLELDEDTEN-LERPF---VNGKQEP------PQLKIEVPANRYDLLCIE 71 Query: 173 GIAL--------------DLVAAGLGKLKEINIS------CPLSSESIPLEIKFDLDDSS 212 GIAL LVA G+L+ I + P S +I I FD + Sbjct: 72 GIALMLNIFRERTLSPEYRLVAPSNGELETIIVKEETMKIRPYISGAILRNIHFD---QA 128 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + F +++ + N RQR L A+G + L Y +L D S Sbjct: 129 RYESFI-----ALQDKLHQNLARQRTLVAIGTHDLDKLKGPFTYEALPPK------DISF 177 Query: 272 ISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGRIQ-SIAGIIGGKH 321 + L R +G++++ ++ + SP VI R+ S+ II G H Sbjct: 178 VP--LNQTRKMNGQEMMEFYEKDKHIGKYLHIIRDSPVYPVIYDSNRVVCSLPPIINGDH 235 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 + NT +V +E D + N+ + S+Y E P V ++ Sbjct: 236 SKITLNTKNVFLEYTATDKTKVEIVN-NIMVTMFSQYTSE---------PFTVEPVRIV- 284 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGE 438 +A + + PR S + + G+ + + +L+R+ + Sbjct: 285 -----SAHNNETRQTPDLSPRPTQASISYINQCCGLSLSAAEICNLLKRMSYFAEPSKTS 339 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SEPLPLTQVEDK-RN 487 D +V VP R DV +AD++E++ YG +++ ++PLP+ ++ D R Sbjct: 340 PDLVDVRVPVTRADVLHQADIMEDVAIAYGFNELPRYFPNISGTIAQPLPVNKLTDIIRT 399 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTS 547 + + + +L S N+++++++ G +++ NP + + +RTS Sbjct: 400 EAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNTAVKLANPKTVEFQVVRTS 450 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIE-GS 601 LLPGLLK G N AI IFEVS V D +++ AA +SG E Sbjct: 451 LLPGLLKTIGENKHHAIP-MKIFEVSDVAFKDVSRERKSTNERHFAAAWYGKTSGFEIVH 509 Query: 602 GRLWSDKSEERCRFV---DLFD--AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G L + + F + D A +A IE LD + +G + H SG Sbjct: 510 GLLDRIMAMLKTAFTIGEEGLDNPAMGNASYWIE---ELDDPTYFTGHAASVHVRISG-- 564 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + V+G FG HP +L F L P+ E+ +++ Sbjct: 565 ---KDHVIGSFGILHPTVLGKFDLKYPVSTLEINIETF 599 >gi|23006379|ref|ZP_00048726.1| COG0072: Phenylalanyl-tRNA synthetase beta subunit [Magnetospirillum magnetotacticum MS-1] Length = 180 Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats. Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 18/163 (11%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSE-------SIPLEIKFDL 208 ++++++TP+R RG+A + + + + + L + P+E+ Sbjct: 1 MLEINVTPDRGYAFSYRGVAREFSHSTGARFTDPGLPGSLPTPPPAATPVGFPVEV---- 56 Query: 209 DDSSLCKGFAMC------CVKGVRNNV-APNWMRQRLKAVGLRSISALVDITNYVSLDRG 261 DD++ G C V+G+ P W+++RL A G+R IS VD+TNYV LD G Sbjct: 57 DDAAPVHGVVGCDRFVTRVVRGLDPAAQTPAWLQRRLTASGMRPISLAVDVTNYVMLDLG 116 Query: 262 YPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI 304 P H +D +++ + VRRA GE++ LD+ + L P++++I Sbjct: 117 QPLHAYDLEKVAAPVVVRRAAPGERLTTLDDVDRALDPEDLLI 159 >gi|296825386|ref|XP_002850807.1| phenylalanyl-tRNA synthetase [Arthroderma otae CBS 113480] gi|238838361|gb|EEQ28023.1| phenylalanyl-tRNA synthetase [Arthroderma otae CBS 113480] Length = 599 Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 82/321 (25%), Positives = 141/321 (43%), Gaps = 45/321 (14%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEK 456 +PR S + + +G+ + +L+++ S + E D +VS+P R DV + Sbjct: 297 EPRTTQASISYINQCTGLSLTGPQMCELLKKMTLSAKVSEKSEDILDVSIPVTRADVLHQ 356 Query: 457 ADLVEEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 AD++E++ YG++++ ++PLP+ ++ D + RV A+ A Sbjct: 357 ADIMEDVAIAYGINELPRSFPSKSGTIAQPLPINKLAD-------------IIRVEAAMA 403 Query: 507 -MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 EV+ ++ S +++ + G +++ NP + + +RTSLLPGLLK N + Sbjct: 404 GWTEVLTFALCSHDENFAWVNRKDDGNTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKN 463 Query: 562 RAIADFAIFEVSHVYEND-----TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 ++ IFEVS V D +++ AA +SG E L DK R Sbjct: 464 HSVP-IKIFEVSDVGLKDLSLERKSRNERHFAAAWYGKTSGFEVVHSLL-DKVMMMMR-- 519 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPN 673 F + L P V E Y PG + I E V+G FG HP Sbjct: 520 SAFIVGEEGLD--NPAVKGSHYWIEELDDPTYFPGHAASIHLRIGGKESVIGSFGIIHPT 577 Query: 674 ILDFFGLSNPICGFEVYLDSI 694 +L+ F L P+ E+ ++S+ Sbjct: 578 VLENFDLKYPVSALEMNIESL 598 >gi|121702673|ref|XP_001269601.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus clavatus NRRL 1] gi|119397744|gb|EAW08175.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus clavatus NRRL 1] Length = 600 Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 135/597 (22%), Positives = 235/597 (39%), Gaps = 108/597 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL--------------VAAGLGKLKEINIS------CP 194 P + + + NR D + GI L L + G+L++I + P Sbjct: 54 PQLKIEIPANRYDLLCFEGIQLMLNIFLGRKALPNYRTIEPANGQLEKIIVKEDTMKVRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 114 LVSGAILRNIKFD---KARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 155 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE+++A ++ L SP Sbjct: 156 H-DLDTIQGPFTYEALPPKDIKFVPLNQTKELNGEELMAFYEKDKHLGKFLHIIRDSPVY 214 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +V +E+ D + K + I S+Y Sbjct: 215 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVFIEITAIDNTKLDIVTK-IMITMFSQYTS 273 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 E P V ++ T + I PR S + + G+++ Sbjct: 274 E---------PFTVEPVQIVSEHNNETRIEPDIV------PRTTQAEVSYINQCCGLELS 318 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 ED ++L ++ + D +V +P R DV +AD++E++ YG + + Sbjct: 319 AEDICKLLTKMAYRARPSASSPDVIDVDIPPTRADVLHQADIMEDVAIAYGFNSLPRSFP 378 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 379 SKSGTIAQPLPINKLTDIVRMEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD----- 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N A+ IFEVS V D Sbjct: 430 GNTAVKLANPKTLEFQVVRTSLLPGLLKTIRENKHHAVP-IKIFEVSDVAFKDLALERKS 488 Query: 582 EGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA +SG E G L + + F+ + L P VS Sbjct: 489 RNERHFAAAWYGKTSGFEVVHGLLDRVMAMLKSAFI----TGEEGLE--NPAVSDSHYWI 542 Query: 641 ESGAPSWYHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E Y PG + I + V+G FG HP +L+ + L P+ EV +++ Sbjct: 543 EELDEPTYFPGHAASIHLRIAGKDHVIGAFGILHPTVLENYDLKYPVSTLEVNIEAF 599 >gi|307069523|ref|YP_003878000.1| putative phenylalanyl-tRNA synthetase subunit beta [Candidatus Zinderia insecticola CARI] gi|306482783|gb|ADM89654.1| putative phenylalanyl-tRNA synthetase, beta subunit [Candidatus Zinderia insecticola CARI] Length = 726 Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 76/327 (23%), Positives = 150/327 (45%), Gaps = 36/327 (11%) Query: 458 DLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 +L+EEIL+IY + IK + PL + + + T Y++ +L + EV+N+SFI+ Sbjct: 391 ELIEEILKIYNIKNIKKKY-PLFNYNNIKCKKEKYFSTDYIRNILCNLDYQEVINYSFIN 449 Query: 518 KEQSVLFG-GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 K F + ++I+NPIS +++ MRTSLLPGL+ N++ IFE+ +++ Sbjct: 450 KNIEKKFNILKNKSIKIINPISKNINIMRTSLLPGLINNAIYNINNNCKRIKIFEIGNIF 509 Query: 577 ENDTPEGQKYMAAG----IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP- 631 + Y ++K S G + K + + +++ + K D + P Sbjct: 510 YKNKKIIDGYKTTKNICELKKISCLTYGD---FYYKQKNINKKLNILNLKKDLEILFWPK 566 Query: 632 ---FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 F++L + + ++ + +G+ GE + N+ + N I FE Sbjct: 567 KINFINLKIKFLNNNSYKIFYKNKK----------IGFLGEVNKNLFKNYNFKNNINIFE 616 Query: 689 V---YLDSIPISQKKRTKTKKV-VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDRLI 744 + YL ++ +K+ + + + L + +K+ L F ++ I L N IK Sbjct: 617 INLKYLKKKILNIRKKYFKRDISIILKNNLNIKKILLF-LNNKIKKNYLFNNIK------ 669 Query: 745 DDVTVFDVFQGKSLGE-GKKSVAIQVL 770 + ++D F+ +L + K S+ ++L Sbjct: 670 -KIIIYDKFENLNLKKINKFSITFRIL 695 >gi|320096501|ref|ZP_08027904.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319976711|gb|EFW08506.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 237 Score = 78.6 bits (192), Expect = 5e-12, Method: Composition-based stats. Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 11/179 (6%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVP-SWRQDVEEKADLVEEILRIYG 468 E +RL+G+ +E + +LE +G SV G D VP SWR D+ + A LVEEI R+ G Sbjct: 33 EAERLTGVAHTVERVVELLETVGCSVDGPADGVMTVVPPSWRSDLVDAAGLVEEIARLDG 92 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---EQSVLFG 525 D I P+ + R L+ Q R LA M+EV ++ F+S Q + Sbjct: 93 YDNI---PVVMPPAPAGRGLTPAQRARRSAAATLAEAGMVEVKSYPFVSDSFDRQGMEAD 149 Query: 526 GGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 +R L + NP++ D +RTSLL LL GRNV R+ D A++E+ V PEG Sbjct: 150 DPRRAALRLRNPMADDAPLLRTSLLDTLLDVAGRNVARSNEDVAVYELGMVAR---PEG 205 >gi|119496669|ref|XP_001265108.1| phenylalanyl-tRNA synthetase, beta subunit [Neosartorya fischeri NRRL 181] gi|119413270|gb|EAW23211.1| phenylalanyl-tRNA synthetase, beta subunit [Neosartorya fischeri NRRL 181] Length = 600 Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 134/597 (22%), Positives = 235/597 (39%), Gaps = 108/597 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GI L LV G+L++I + P Sbjct: 54 PQLKIEIPANRYDLLCFEGIQLMLNIFLGRKPLPNYRLVEPANGQLEKIIVKEDTMKVRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 114 LVSGAILRNIKFD---KARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 155 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE++++ ++ L SP Sbjct: 156 H-DLDTIQGPFTYEALPPKDIKFVPLNQTKELNGEELMSFYEKDKHLGKYLHIIRDSPVY 214 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +VL+EV D + K + + S+Y Sbjct: 215 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVLIEVTALDKTKLDIVTK-IMVTMFSQYTS 273 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 E P V ++ T + IA PR S + + G+++ Sbjct: 274 E---------PFTVEPVQIVSEHNNETRVEPDIA------PRTTQAEVSYINQCCGLELS 318 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 E+ ++L ++ + D +V VP R DV +AD++E++ YG + + Sbjct: 319 PEEICKLLTKMAYQARPSASSPDLIDVDVPPTRADVLHQADIMEDVAIAYGFNSLPRSFP 378 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + T + +L S N+++++++ Sbjct: 379 SKSGTIAQPLPINKLSDIVRMEAAMAGWTEVLPLILCSHDE----NFAWLNRKDD----- 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RT+LLPGLLK N A+ IFE S V D Sbjct: 430 GNTAVKLANPKTVEFQVVRTTLLPGLLKTIRENKHHAVP-IKIFECSDVAFKDLALERKS 488 Query: 582 EGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA +SG E G L + + F+ + L P V Sbjct: 489 RNERHFAAAWYGKTSGFEVVHGLLDRIMAMLKSAFI----TGEECLE--NPAVGDSHYWI 542 Query: 641 ESGAPSWYHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E Y PG + I + V+G FG HP +L+ + L P+ E+ +++ Sbjct: 543 EELDEPTYFPGHAASIHLRIAGKDHVIGAFGILHPTVLEKYELKYPVSTLEINIEAF 599 >gi|295670702|ref|XP_002795898.1| phenylalanyl-tRNA synthetase beta chain [Paracoccidioides brasiliensis Pb01] gi|226284031|gb|EEH39597.1| phenylalanyl-tRNA synthetase beta chain [Paracoccidioides brasiliensis Pb01] Length = 600 Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 135/594 (22%), Positives = 236/594 (39%), Gaps = 102/594 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + + GIAL LV G+L++I + P Sbjct: 54 PQLKIEVPANRYDLMCIEGIALMLNIFRGRATLPKYRLVTPTNGELEQIIVKEETMKVRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I I+FD + F +++ + N RQR L +VG + + Sbjct: 114 YISGAILRNIRFD---QARYDSFI-----ALQDKLHQNLARQRTLVSVGTHDLDTIKGPF 165 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SP-DNVV 303 Y ++ D S I L + +GE+++ ++ L SP VV Sbjct: 166 TYEAVPPK------DVSFIP--LNQTKKMNGEELMEFYEKDKHLGKYLHIIRDSPVYPVV 217 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 +D + S+ II H+ NT +V +E D + N+ + S+Y E Sbjct: 218 YDADHVVCSLPPIINSDHSKITLNTKNVFLEYTALDKTKVEIVN-NILVAMFSQYTSE-- 274 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ G T + PR S + + G+ + + Sbjct: 275 -------PFTVEPVRIVSEHNGETRETPNL------NPRHTQASKSYINQCCGLSLSAAE 321 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+R+ + D ++ VP R DV +AD++E++ YG +++ Sbjct: 322 ICNLLKRMAYFAEPSKTSPDLIDLEVPVTRADVLHQADIMEDVAIAYGFNELPRYFPSKS 381 Query: 474 ---SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ + D R + + + +L S N+++++++ + G Sbjct: 382 GTIAQPLPVNMLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDN-----GNT 432 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK---- 585 +++ NP + + +RTSLLPGLLK N AI IFEVS V D +K Sbjct: 433 AVKLANPKTVEFQVVRTSLLPGLLKTISENKHHAIP-MKIFEVSDVVFKDLSLERKSRNV 491 Query: 586 -YMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + AA +SG E G L + + FV + L+ P +S + E Sbjct: 492 RHFAAAWYGKTSGFEIVHGLLDRVMAMLKTAFV----IGEEGLN--NPAMSYATYWIEEL 545 Query: 644 APSWYHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y PG S I + + V+G FG HP +L+ F L P+ E+ +++ Sbjct: 546 EDPTYFPGHSASIHARISGKDHVIGSFGILHPTVLEKFELKYPVSTLEINIEAF 599 >gi|326470844|gb|EGD94853.1| phenylalanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818] Length = 598 Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 97/423 (22%), Positives = 182/423 (43%), Gaps = 69/423 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S + S+ II G H+ NT +V +E+ D + + + F Sbjct: 214 VIYDSKRTVCSLPPIINGDHSKITLNTRNVFMEITATDKTKLEVVNNIMVTM------FS 267 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + D I +K I+S G + + T +PR + + + +G+ + Sbjct: 268 QCTDEPFTIEPIK-----IVSEHNGESRQVP-----TLEPRTTQASIAYINQCTGLSLSG 317 Query: 422 EDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 D+ ++L+++ S + E D +V++P R D+ +AD++E++ +G +++ Sbjct: 318 PDACKLLKKMALSAKVSETSDDTLDVTIPVTRADILHQADIMEDVAIAHGFNELPRSFPS 377 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + T + L S N+S+++++ G Sbjct: 378 KSGTIAQPLPINKLGDIIRGEAAMAGWTEVLTFALCSHDE----NFSWVNRKDD-----G 428 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 +++ NP + + +RTSLLPGLLK N + ++ IFEVS V D Sbjct: 429 TTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKNHSLP-IKIFEVSDVGLKDLSLERKSR 487 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 +++ AA +SG E L DK + K+ + E LD+ + Sbjct: 488 NERHFAAAWYGKTSGFEVVHGLL-DKV--------MMMMKSGFIVGEE---GLDNAAIK- 534 Query: 643 GAPSW--------YHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 G+ W Y PG + I E V+G FG HP +L+ F L +P+ E+ + Sbjct: 535 GSQYWIEELDDPTYFPGHAATIHLRMDGKESVIGTFGILHPTVLENFDLRHPVSALEINI 594 Query: 692 DSI 694 +++ Sbjct: 595 ETL 597 >gi|327307560|ref|XP_003238471.1| phenylalanyl-tRNA synthetase [Trichophyton rubrum CBS 118892] gi|326458727|gb|EGD84180.1| phenylalanyl-tRNA synthetase [Trichophyton rubrum CBS 118892] Length = 600 Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 179/424 (42%), Gaps = 71/424 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S + S+ II G H+ NT +V +E+ D + + + F Sbjct: 216 VIYDSKRTVCSLPPIINGDHSKITLNTRNVFMEITATDRTKLEVVNNIMVTM------FS 269 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + D I +K I+S G + + T KPR + + + +G+ + Sbjct: 270 QCTDEPFTIEPIK-----IVSEHNGESRQVP-----TLKPRTTQASIAYINQCTGLSLSG 319 Query: 422 EDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 ++ ++ +++ S + E D +V++P R D+ +AD++E++ +G +++ Sbjct: 320 PETCKLFKKMALSAKVSETSDDTLDVTIPVTRADILHQADIMEDVAIAHGFNELPRSFPS 379 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + T + L S N+S+++++ G Sbjct: 380 KSGTIAQPLPINKLGDIIRGEAAMAGWTEVLTFALCSHDE----NFSWVNRKDD-----G 430 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 +++ NP + + +RTSLLPGLLK N + ++ IFEVS V D Sbjct: 431 TTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKNHSLP-IKIFEVSDVGLKDLSLERKSR 489 Query: 583 GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E G L + F+ + + D +V Sbjct: 490 NERHFAAAWYGKTSGFEVVHGLLDKVMMMMKSGFI-VGEEGLDNAAV------------- 535 Query: 642 SGAPSW--------YHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 G+ W Y PG + I E ++G FG HP +LD F L +P+ E+ Sbjct: 536 KGSQYWIEELDDPTYFPGHAATIHLRMDGKESIIGTFGILHPTVLDNFDLRHPVSALEIN 595 Query: 691 LDSI 694 ++++ Sbjct: 596 IETL 599 >gi|326478408|gb|EGE02418.1| phenylalanyl-tRNA synthetase [Trichophyton equinum CBS 127.97] Length = 600 Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 95/424 (22%), Positives = 180/424 (42%), Gaps = 71/424 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S + S+ II G H+ NT +V +E+ D + + + F Sbjct: 216 VIYDSKRTVCSLPPIINGDHSKITLNTRNVFMEITATDKTKLEVVNNIMVTM------FS 269 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + D I +K I+S G + + T +PR + + + +G+ + Sbjct: 270 QCTDEPFTIEPIK-----IVSEHNGESRQVP-----TLEPRTTQASIAYINQCTGLSLSG 319 Query: 422 EDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 D+ ++L+++ S + E D +V++P R D+ +AD++E++ +G +++ Sbjct: 320 PDASKLLKKMALSAKVSETSDDTLDVTIPVTRADILHQADIMEDVAIAHGFNELPRSFPS 379 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + T + L S N+S+++++ G Sbjct: 380 KSGTIAQPLPINKLGDIIRGEAAMAGWTEVLTFALCSHDE----NFSWVNRKDD-----G 430 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 +++ NP + + +RTSLLPGLLK N + ++ IFEVS V D Sbjct: 431 TTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKNHSLP-IKIFEVSDVGLKDLSLERKSR 489 Query: 583 GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E G L + F+ + + D +V Sbjct: 490 NERHFAAAWYGKTSGFEVVHGLLDKVMMMMKSGFI-VGEEGLDNAAV------------- 535 Query: 642 SGAPSW--------YHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 G+ W Y PG + I E V+G FG HP +L+ F L +P+ E+ Sbjct: 536 KGSQYWIEELDDPTYFPGHAATIHLRMDGKESVIGTFGILHPTVLENFDLRHPVSALEIN 595 Query: 691 LDSI 694 ++++ Sbjct: 596 IETL 599 >gi|255029875|ref|ZP_05301826.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes LO28] Length = 173 Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 55/177 (31%), Positives = 90/177 (50%), Gaps = 16/177 (9%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M + +W+K+ D ++ E++ + +T G+E+E V+ A L + +VLS ER+PD Sbjct: 1 MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLKNVVVGEVLSCERHPDA 60 Query: 59 D----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIES 114 + C + T + + +Q++CGAPNV G + A G+ +P + + K+RG S Sbjct: 61 EKLNKCLV---QTDEAEPVQIICGAPNVAAGQKVIVAKVGARLP-GGLKIKRAKLRGEVS 116 Query: 115 TGMMCSEKELMLSDD------SASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNR 165 GM+CS EL + I LP G L L D I+D+++TPNR Sbjct: 117 EGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVNAITLLGLDDAILDMAITPNR 173 >gi|240103207|ref|YP_002959516.1| phenylalanyl-tRNA synthetase subunit beta [Thermococcus gammatolerans EJ3] gi|259511902|sp|C5A5Z0|SYFB_THEGJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|239910761|gb|ACS33652.1| Phenylalanyl-tRNA synthetase, beta subunit (pheT_arch) [Thermococcus gammatolerans EJ3] Length = 568 Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 99/406 (24%), Positives = 175/406 (43%), Gaps = 63/406 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +++ S+G++ S+ II + G T +V V+V WD +N N+ + + Sbjct: 201 LLVDSEGKVLSMPPIINSETTGRVTTETRNVFVDVTGWD-LNKVMLALNVVVTALA---- 255 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSEVKRLSGIDV 419 ERG G I +K + D I N+T P+ +++L+G+D+ Sbjct: 256 ERG----GRIKSVKVVYP-----------DFEIETPNLT--PKSFEVELDYIRKLAGLDL 298 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLP 478 + +LER+ + V E K ++ P++R D+ D++E++L YG ++I+ EP Sbjct: 299 SDGEIKDLLERMMYDVTLEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNEIEPEEPKL 358 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----------LFGGGQ 528 Q + + + + V+ ++ + EV+ ++ ++E F Sbjct: 359 AVQGRGDKFIEFEDA----VRELMVGFGLQEVMTFNLTNREAQYGKMNLEYGRDYFNNPP 414 Query: 529 REL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 EL EI NPIS S +R LLP LL +N +FEV D K + Sbjct: 415 AELVEIENPISPKWSALRNWLLPSLLDFLSQNTHEEYPQ-RLFEVGKATLIDESRETKTV 473 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 + +L ++ R F D + L + + + E PS Sbjct: 474 S------------ESKLAVVLAQPRVTFTD----TKEILDSVMRHLGFEYELEEVEHPS- 516 Query: 648 YHPGRSG--IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + PGR G I+K A +G GE HP++L+ +G+ P+ GFE++L Sbjct: 517 FIPGRVGKVIVKGKA---IGVIGEIHPSVLEKWGIEMPVAGFELFL 559 >gi|70990924|ref|XP_750311.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus fumigatus Af293] gi|66847943|gb|EAL88273.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus fumigatus Af293] gi|159130784|gb|EDP55897.1| phenylalanyl-tRNA synthetase, beta subunit [Aspergillus fumigatus A1163] Length = 600 Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 133/597 (22%), Positives = 236/597 (39%), Gaps = 108/597 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GI L LV G+L++I + P Sbjct: 54 PQLKIEIPANRYDLLCFEGIQLMLNIFLGRKPLPNYRLVEPANGQLEKIIVKEDTMKVRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 114 LVSGAILRNIKFD---KARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 155 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE++++ ++ L SP Sbjct: 156 H-DLDTIQGPFTYEALPPKDIKFVPLNQTKELNGEELMSFYEKDKHLGKYLHIIRDSPVY 214 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +VL+E+ D + K + + S+Y Sbjct: 215 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVLIEITALDKTKLDIVTK-IMVTMFSQYTS 273 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 + P V ++ T + IA PR S + + G+++ Sbjct: 274 K---------PFTVEPVQIVSEHNNETRVEPDIA------PRTTQAEVSYINQCCGLELS 318 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 E+ ++L ++ + D +V VP R DV +AD++E++ YG + + Sbjct: 319 PEEICKLLTKMAYQARPSASSPDLIDVDVPPTRADVLHQADIMEDVAIAYGFNSLPRSFP 378 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + T + +L S N+++++++ Sbjct: 379 SKSGTIAQPLPINKLSDIVRMEAAMAGWTEVLPLILCSHDE----NFAWLNRKDD----- 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N A+ IFE S V D Sbjct: 430 GTTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKHHAVP-IKIFECSDVAFKDLTLERKS 488 Query: 582 EGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA +SG E G L + + F+ + L P V+ Sbjct: 489 RNERHFAAAWYGRTSGFEVVHGLLDRIMAMLKSAFI----TGEECLE--NPAVNDSHYWI 542 Query: 641 ESGAPSWYHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E Y PG + I + V+G FG HP +L+ + L P+ E+ +++ Sbjct: 543 EELDEPTYFPGHAASIHLRIAGKDHVIGAFGILHPTVLEKYELKYPVSTLEINIEAF 599 >gi|322386289|ref|ZP_08059920.1| tRNA binding domain protein [Streptococcus cristatus ATCC 51100] gi|321269656|gb|EFX52585.1| tRNA binding domain protein [Streptococcus cristatus ATCC 51100] Length = 208 Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + LT G + E V++RE F + ++L + +PD D I ++ Q Sbjct: 68 TDEQVATLNQELTKEGFQAELVNDREP--KFVVGEILEMVAHPDSDHLNICQVQVAADQT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|225682377|gb|EEH20661.1| phenylalanyl-tRNA synthetase beta chain [Paracoccidioides brasiliensis Pb03] Length = 602 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 134/594 (22%), Positives = 235/594 (39%), Gaps = 102/594 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + + GIAL LV G+L++I + P Sbjct: 56 PQLKIEVPANRYDLMCIEGIALMLNIFRGRATLPKYRLVTPPNGELEQIIVKEETMKVRP 115 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I I+FD + F +++ + N RQR L +VG + + Sbjct: 116 YISGAILRNIRFD---QARYDSFI-----ALQDKLHQNLARQRTLVSVGTHDLDTIKGPF 167 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SP-DNVV 303 Y ++ D S I L R +GE+++ ++ L SP VV Sbjct: 168 TYEAVPPK------DVSFIP--LNQTRKMNGEELMEFYEKDKHLGKYLHIIRDSPVYPVV 219 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 +D + S+ II H+ NT +V +E D + N+ + S+Y E Sbjct: 220 YDADHVVCSLPPIINSDHSKITLNTKNVFLEYTALDKTKVEIVN-NILVAMFSQYTSE-- 276 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ G T + PR S + + G+ + + Sbjct: 277 -------PFTVEPVRIVSEHNGETRETPNL------NPRHTQASISYINQCCGLSLSTTE 323 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+R+ + D ++ VP R DV +AD++E++ YG +++ Sbjct: 324 ICNLLKRMAYFAEPSKTSPDLIDLEVPVTRADVLHQADIMEDVAIAYGFNELPRYFPSKS 383 Query: 474 ---SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 384 GTIAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNT 434 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK---- 585 +++ NP + + +RTSLLPGLLK N AI IFEVS V D +K Sbjct: 435 AVKLANPKTVEFQVVRTSLLPGLLKTISENKHHAIP-MKIFEVSDVVFKDLSLERKSRNV 493 Query: 586 -YMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + AA +SG E G L + + F+ + L+ P +S + E Sbjct: 494 RHFAAAWYGKTSGFEVVHGLLDRVMAMLKTAFI----IGEEGLN--NPAMSYATYWIEEL 547 Query: 644 APSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y PG + I + V+G FG HP +L+ F L P+ E+ +++ Sbjct: 548 EDPTYFPGHAASIHVRIYGKDHVIGSFGILHPTVLENFELKYPVSTLEINIEAF 601 >gi|329768701|ref|ZP_08260185.1| hypothetical protein HMPREF0428_01882 [Gemella haemolysans M341] gi|328836415|gb|EGF86080.1| hypothetical protein HMPREF0428_01882 [Gemella haemolysans M341] Length = 201 Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +VLS E++PD D + + + + +Q+VCGAPNV G V A G+ +P + + Sbjct: 92 FVVGEVLSCEKHPDADKLKVTEVKVSEDETLQIVCGAPNVEAGQKVVVALSGAMMP-SGL 150 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSA-SIMELPIDAPVGGRLSD 148 ++ K+RG+ES GM+CS++EL L + A I+ L D VG R+ D Sbjct: 151 LIKKSKLRGVESNGMLCSKRELGLPQEEARGILVLDADTKVGTRVKD 197 >gi|226289772|gb|EEH45256.1| phenylalanyl-tRNA synthetase beta chain [Paracoccidioides brasiliensis Pb18] Length = 602 Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 134/594 (22%), Positives = 235/594 (39%), Gaps = 102/594 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + + GIAL LV G+L++I + P Sbjct: 56 PQLKIEVPANRYDLMCIEGIALMLNIFRGRATLPKYRLVTPPNGELEQIIVKEETMKVRP 115 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I I+FD + F +++ + N RQR L +VG + + Sbjct: 116 YISGAILRNIRFD---QARYDSFI-----ALQDKLHQNLARQRTLISVGTHDLDTIKGPF 167 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SP-DNVV 303 Y ++ D S I L R +GE+++ ++ L SP VV Sbjct: 168 TYEAVPPK------DVSFIP--LNQTRKMNGEELMEFYEKDKHLGKYLHIIRDSPVYPVV 219 Query: 304 IASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 +D + S+ II H+ NT +V +E D + N+ + S+Y E Sbjct: 220 YDADHVVCSLPPIINSDHSKITLNTKNVFLEYTALDKTKVEIVN-NILVAMFSQYTSE-- 276 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ G T + PR S + + G+ + + Sbjct: 277 -------PFTVEPVRIVSEHNGETRETPNL------NPRHTQASISYINQCCGLSLSTTE 323 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+R+ + D ++ VP R DV +AD++E++ YG +++ Sbjct: 324 ICNLLKRMAYFAEPSKTSPDLIDLEVPVTRADVLHQADIMEDVAIAYGFNELPRYFPSKS 383 Query: 474 ---SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 384 GTIAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNT 434 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK---- 585 +++ NP + + +RTSLLPGLLK N AI IFEVS V D +K Sbjct: 435 AVKLANPKTVEFQVVRTSLLPGLLKTISENKHHAIP-MKIFEVSDVVFKDLSLERKSRNV 493 Query: 586 -YMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 + AA +SG E G L + + F+ + L+ P +S + E Sbjct: 494 RHFAAAWYGKTSGFEVVHGLLDRVMAMLKTAFI----IGEEGLN--NPAMSYATYWIEEL 547 Query: 644 APSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y PG + I + V+G FG HP +L+ F L P+ E+ +++ Sbjct: 548 EDPTYFPGHAASIHVRIYGKDHVIGSFGILHPTVLENFELKYPVSTLEINIEAF 601 >gi|124486189|ref|YP_001030805.1| phenylalanyl-tRNA synthetase subunit beta [Methanocorpusculum labreanum Z] gi|166227806|sp|A2ST82|SYFB_METLZ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|124363730|gb|ABN07538.1| phenylalanyl-tRNA synthetase beta subunit [Methanocorpusculum labreanum Z] Length = 540 Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 130/559 (23%), Positives = 220/559 (39%), Gaps = 92/559 (16%) Query: 158 DVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDD------- 210 DV PNR D G A L LG I P + E P I F +D Sbjct: 42 DVQFFPNRPDLYSAEGTARAL-RGYLG----IETGLP-TYEVKPSGISFSVDPKLANIRP 95 Query: 211 ---SSLCKGFAM-----CCVKGVRNNVAPNWMRQRLK-AVGLRSISALVDITNYVSLDRG 261 S++ + M + G++ ++ R R K A+G+ + + +Y++ DR Sbjct: 96 YLGSAVIRNVHMDNAMIESLMGLQESLHWAVGRGRKKVAIGVHDLDKIEGPFSYIAADRK 155 Query: 262 YPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKH 321 D + + K A +E++ P ++ + GR+ S II G+ Sbjct: 156 TTFVPLDYDVEMTMEEILAEHPKGKAYARIVEEFERFP--LITDAKGRVCSFPPIINGEL 213 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 ++T ++L++V +P ++ + K L E G +++ + Sbjct: 214 TRVTEDTQNILLDVTGIEPRAVSVAVKIL-----CAAFVEMGAEIES------------V 256 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILE--RLGFSVIGEY 439 + G + D+ +P K SE +L+GI + +L R G VI E Sbjct: 257 EIDGVVSPDL--------RPEKRTVSVSECSKLTGIPMTASQMTELLMKMRFGAEVIDE- 307 Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D V +P +R D+ D+ E+ YG D+I++ P V + Q V+ Sbjct: 308 DTVSVDIPCYRADIMHDHDVYEDAAIAYGYDKIETSLPPSFTVGKPHPV---QKLYSLVR 364 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLK 554 ++ + +E N F V + R L +L+PIS D + +RT +LP L++ Sbjct: 365 NIMVGLSYIE--NTPFTLTSGDVSYSLMHRPENPAALHVLHPISEDQTIIRTDILPLLME 422 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 + N R + IF V EN K AA I + Sbjct: 423 SLSINRSRELPQ-KIFACGDVVENLV-TYPKMAAASIHTSAD------------------ 462 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFE--SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 F +++ +V++ F + S+ +E A + PGR G I S E + G FGE +P Sbjct: 463 FSEIY-------AVMDAFCRMMSIEYEVRDSADDAFIPGRRGDIYVSGEKI-GVFGEINP 514 Query: 673 NILDFFGLSNPICGFEVYL 691 ++L FGL + FE+ L Sbjct: 515 DVLVGFGLEHQAVAFEIDL 533 >gi|302657283|ref|XP_003020366.1| hypothetical protein TRV_05537 [Trichophyton verrucosum HKI 0517] gi|291184195|gb|EFE39748.1| hypothetical protein TRV_05537 [Trichophyton verrucosum HKI 0517] Length = 525 Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 94/424 (22%), Positives = 180/424 (42%), Gaps = 71/424 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S + S+ II G H+ NT +V +E+ D + + + F Sbjct: 141 VIYDSKRTVCSLPPIINGDHSKITLNTRNVFMEITATDKTKLEVVNNIMVTM------FS 194 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + D I +K I+S G + + T +PR + + + +G+ + Sbjct: 195 QCTDEPFTIEPIK-----IVSEHNGESRQVP-----TLEPRTTQASIAYINQCTGLSLSG 244 Query: 422 EDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 ++ ++L+++ S + E D +V++P R D+ +AD++E++ +G +++ Sbjct: 245 PETCKLLKKMALSAKVSETSDDTLDVTIPVTRADILHQADIMEDVAIAHGFNELPRSFPS 304 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + T + L S N+S+++++ G Sbjct: 305 KSGTIAQPLPINKLGDIIRGEAAMAGWTEVLTFALCSHDE----NFSWVNRKDD-----G 355 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 +++ NP + + +RTSLLPGLLK N + ++ IFEVS V D Sbjct: 356 TTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKNHSLP-IKIFEVSDVGLKDLSLERKSR 414 Query: 583 GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E G L + F+ + + D +V Sbjct: 415 NERHFAAAWYGKTSGFEVVHGLLDKVMMMMKSGFI-VGEEGLDNAAV------------- 460 Query: 642 SGAPSW--------YHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 G+ W Y PG + I E V+G FG HP +L+ F L +P+ E+ Sbjct: 461 KGSQYWIEELDDPTYFPGHAASIHLRMDGKESVIGTFGILHPTVLENFDLRHPVSALEIN 520 Query: 691 LDSI 694 ++++ Sbjct: 521 IETL 524 >gi|212527954|ref|XP_002144134.1| phenylalanyl-tRNA synthetase, beta subunit [Penicillium marneffei ATCC 18224] gi|210073532|gb|EEA27619.1| phenylalanyl-tRNA synthetase, beta subunit [Penicillium marneffei ATCC 18224] Length = 596 Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 128/595 (21%), Positives = 241/595 (40%), Gaps = 104/595 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + GIAL L V G + P S + + +K +D+S Sbjct: 50 PQLKIDIPANRYDLLCFEGIALMLNVFLGRKPFPNYRLVQPASGQLEKIIVK---EDTSK 106 Query: 214 CKGFAMCCVK--------------GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLD 259 + + + G+++ + N RQR LV I + LD Sbjct: 107 IRPYVAGAILRGVTFDEARYQSFIGLQDKLHQNIARQR----------TLVSIGTH-DLD 155 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIA- 305 +DA D+ L + +GE+++A +++ L SP VI Sbjct: 156 TIKGPFTYDALPPKDIRFTPLNQTKEMNGEELMAFYDKDKHLGRYLHIIRDSPVYPVIYD 215 Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 S+ + S+ II G H+ NT +V +E+ D + K + + S Y E Sbjct: 216 SNQTVCSLPPIINGDHSKITLNTKNVFIEITALDKTKLEIVNK-IMVTMFSLYTAE---- 270 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 P V ++ G T I+ PR S + + +++ E+ Sbjct: 271 -----PFTIEPVEIVSEHNGETRVTPDIS------PRTTQAELSYINQCCDLNLSAEEVC 319 Query: 426 RILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--------- 473 R+L ++ + D +V +P R D+ + D++E++ YG +++ Sbjct: 320 RLLTKMAYKAWPSKTSSDLIDVDIPPTRADILHQVDIMEDVAIAYGFNELPRSFPSKSGT 379 Query: 474 -SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 ++PLP+ ++ D R + + + +L S N+++++++ G + Sbjct: 380 IAQPLPVNKLTDIIRMEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD-----GNTAV 430 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQKY 586 ++ NP + + +RTSLLPGLLK N ++ IFEVS V D +++ Sbjct: 431 KLANPKTLEFQVVRTSLLPGLLKTLKENRMHSVP-MKIFEVSDVAFKDLSLERKSRNERH 489 Query: 587 MAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF---ES 642 AA +SG E G L + + F+ + +A +++ R+ E Sbjct: 490 FAAAWYGKTSGFEVVHGLLDRVMAMMKSAFITGEEGLENA--------AVNESRYWIEEL 541 Query: 643 GAPSWYHPGRSGIIKTS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 P+++ PG + + S E V+G FG HP +L+ + L P+ E+ +++ Sbjct: 542 DDPTYF-PGHAASVHVSIGGKEQVIGSFGILHPTVLENYDLKLPVSTIELNIEAF 595 >gi|255018389|ref|ZP_05290515.1| phenylalanyl-tRNA synthetase subunit beta [Listeria monocytogenes FSL F2-515] Length = 245 Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 119/259 (45%), Gaps = 22/259 (8%) Query: 552 LLKATGRNVDRAIADFAIFEVSHVY---ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK 608 L+++ N+ R D A++E+ V+ E D ++ AG+ G+ I W Sbjct: 2 LIRSASYNIARKNMDVALYEMGTVFYATEGDNLPIEQEHLAGLITGNWHIAD----WQKT 57 Query: 609 SEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 + VD F K ++ L ++ HPGR+ + + + GY G Sbjct: 58 PKP----VDFFVLKGIVEGLVNKLGIKSELHWKQTEKEELHPGRTASLVLEGQEI-GYLG 112 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSIPISQK-KRTKTKKVVHLSSLHP-VKRDLAFIVDQ 726 HP + + L E Y+ I ++ TK K V H +P + RDLA +VD+ Sbjct: 113 ALHPAVEANYDLK------ETYVFEINVAALLDATKEKVVYHPIPRYPEMTRDLALLVDK 166 Query: 727 HIPAGTLVNIIK-NVDRLIDDVTVFDVFQGKSLGEGKKSVAIQV-LIQPLKDTFRDDDIR 784 + +IK + +L+ D+ +FD+F+G+SLGE KK I + + K+T R + Sbjct: 167 DTNHAAISQVIKEHGGKLLVDIELFDIFEGESLGENKKYTRIHIDFPRQRKNTSRRRCTK 226 Query: 785 ILMDRIVENVVKKTNAVLR 803 +++VE + +K NA++R Sbjct: 227 KQPNKVVEALQEKLNAIIR 245 >gi|156938013|ref|YP_001435809.1| phenylalanyl-tRNA synthetase subunit beta [Ignicoccus hospitalis KIN4/I] gi|156566997|gb|ABU82402.1| phenylalanyl-tRNA synthetase beta subunit [Ignicoccus hospitalis KIN4/I] Length = 529 Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 39/276 (14%) Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 S+G+I S+A I+ + D+NT +V V+V P + R + +T R R Sbjct: 200 SEGKIMSLAPILNAEDYKVDENTKNVFVDVTGTVPEVMLRVLDVM--VTSLAERSPR--- 254 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 P L+ + + G + K RK+ +KR++G + +ED Sbjct: 255 -----PELQRV-----EVIGANM------KTPRLKYRKVRLDKEAIKRVAGFE--LEDVE 296 Query: 426 RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK 485 +L ++G V GE+ P +R DV + DL E+ L YG +++ +E LP T + Sbjct: 297 GLLRKMGLFVEGEW----AVAPPYRIDVFSEVDLAEDALSAYGYNKVPAEALPPTHWGSR 352 Query: 486 RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE--QSVLFGGGQRELEILNPISADMSN 543 Y+ R+L S + EV N++ I E + +L G +++LNP S Sbjct: 353 DYFK------DYLARILTSMGLEEVFNFALIDGELVEELL---GVEPVKVLNPRLKSYSA 403 Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 +R SL+P LL A +N A++ +FEV V D Sbjct: 404 LRPSLVPSLLLAVKQN-QEALSRVEVFEVGPVVLKD 438 >gi|116754789|ref|YP_843907.1| phenylalanyl-tRNA synthetase subunit beta [Methanosaeta thermophila PT] gi|121693527|sp|A0B993|SYFB_METTP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|116666240|gb|ABK15267.1| phenylalanyl-tRNA synthetase beta subunit [Methanosaeta thermophila PT] Length = 539 Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 96/407 (23%), Positives = 171/407 (42%), Gaps = 82/407 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 +++ +D + S +I G+ ++TTD+ ++V DP+ + L I+ + E Sbjct: 196 LIVDADDNVLSFPPVINGELTRVREDTTDLFIDVTGTDPVVY----RALNIVVTALA--E 249 Query: 362 RGVDLQG--MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 RG ++G MI K +S LS P + SE L G ++ Sbjct: 250 RGGRIEGVRMISPDKEWISPDLS------------------PARWTVTTSEANSLIGFNL 291 Query: 420 PIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE--- 475 E+ L R+ F + D EV VP++R D+ D++E+ + YG + +K+E Sbjct: 292 SAEELAECLRRMRFGARHLDNDSVEVLVPAYRADIMHTWDIIEDAAKSYGYENLKAEMPR 351 Query: 476 ------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 P P+ +++D+ V+ ++ +EV+ ++ + + V F +R Sbjct: 352 TLTIGRPHPMEELKDE------------VRDLMVGLGYLEVMPFTLTN--EKVHFEMMRR 397 Query: 530 E----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 +++PIS + +RT++LPGL++ N A+ +F V V D Sbjct: 398 SAGECTRVMHPISELHTIIRTAVLPGLMEILSLNQHHALPQ-RLFAVGDVV-IDGRTKCH 455 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 A I G+ E S + + E R +S + + GA Sbjct: 456 LSAVSIHSGAGFAEISSLVSAIMRELR--------------------ISAEVVESSDGA- 494 Query: 646 SWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + PGR ++ A I G FGE HP ++ FGL +P+ G E+ L Sbjct: 495 --FIPGRGADLMLNGARI--GCFGEIHPEVISAFGLEHPVVGMELEL 537 >gi|240281579|gb|EER45082.1| phenylalanyl-tRNA synthetase subunit beta [Ajellomyces capsulatus H143] gi|325087730|gb|EGC41040.1| phenylalanyl-tRNA synthetase subunit beta [Ajellomyces capsulatus H88] Length = 600 Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 146/638 (22%), Positives = 253/638 (39%), Gaps = 116/638 (18%) Query: 113 ESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVR 172 E +C E L L +D+ + +E P V G+ P + + + NR D + + Sbjct: 22 EEFDQLCFEFGLELDEDTEN-LERPF---VNGKQEP------PQLKIEVPANRYDLLCIE 71 Query: 173 GIAL--------------DLVAAGLGKLKEINIS------CPLSSESIPLEIKFDLDDSS 212 GIAL LVA G+L+ I + P S +I I FD + Sbjct: 72 GIALMLNIFRERTLSPEYRLVAPSNGELETIIVKDETMKIRPYISGAILRNIHFD---QA 128 Query: 213 LCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGYPSHVFDASR 271 + F +++ + N RQR L A+G + L Y +L D S Sbjct: 129 RYESFI-----ALQDKLHQNLARQRTLVAIGTHDLDKLKGPFTYEALPPK------DISF 177 Query: 272 ISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGRIQ-SIAGIIGGKH 321 + L R +G++++ ++ + SP VI R+ S+ II G H Sbjct: 178 VP--LNQTRKMNGQEMMEFYEKDKHIGKYLHIIRDSPVYPVIYDSNRVVCSLPPIINGDH 235 Query: 322 AGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLIL 381 + +T +V +E D + N+ + S+Y E P V ++ Sbjct: 236 SKITLSTKNVFLEYTATDKTKV-EIVNNIMVTMFSQYTSE---------PFTVEPVRIV- 284 Query: 382 SLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGE 438 +A + + PR S + + G+ + + +L+R+ + Sbjct: 285 -----SAHNNETRQTPDLSPRPTQASISYINQCCGLSLSAAEICDLLKRMSYFAEPSKTS 339 Query: 439 YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SEPLPLTQVEDK-RN 487 D +V VP R DV +AD++E++ YG +++ ++PLP+ ++ D R Sbjct: 340 PDLVDVRVPVTRADVLHQADIMEDVAIAYGFNELPRYFPNISGTIAQPLPVNKLTDIIRT 399 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTS 547 + + + +L S N+++++++ G +++ NP + + +RTS Sbjct: 400 EAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNTAVKLANPKTVEFQVVRTS 450 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIE-GS 601 LLPGLLK G N AI IFEVS V D +++ AA +SG E Sbjct: 451 LLPGLLKTIGENKHHAIP-MKIFEVSDVAFKDVSRERKSTNERHFAAAWYGKTSGFEIVH 509 Query: 602 GRLWSDKSEERCRFVDLFD-----AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 G L + + F + A +A IE LD + +G + H SG Sbjct: 510 GLLDRIMAMLKTAFTIGEEGLGNPAMGNASYWIE---ELDDPTYFTGHAASVHVRISG-- 564 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + V+G FG HP +L F L P+ E+ +++ Sbjct: 565 ---KDHVIGSFGILHPTVLGKFDLKYPVSTLEINIETF 599 >gi|315641678|ref|ZP_07896735.1| tRNA binding domain protein [Enterococcus italicus DSM 15952] gi|315482572|gb|EFU73105.1| tRNA binding domain protein [Enterococcus italicus DSM 15952] Length = 200 Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD L I + + G V ++A F + V E +PD D +I ++ + + Sbjct: 67 TDAQLATINELIQEAGFSETVV--KDAEPKFVVGYVQECEAHPDSDHLSITKVKVDEGKV 124 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCGAPN+R GL V A PG+ +P + +++ ++RG+ S GM+CS KEL L++ Sbjct: 125 LQIVCGAPNIRKGLKVVVAKPGAMMP-DGLLIWPGELRGVASAGMICSAKELQLTNAPKK 183 Query: 131 ASIMELPIDAPVG 143 I+ELP DA G Sbjct: 184 RGILELPQDAETG 196 >gi|145254883|ref|XP_001398790.1| phenylalanine--tRNA ligase subunit beta [Aspergillus niger CBS 513.88] gi|134084375|emb|CAK48714.1| unnamed protein product [Aspergillus niger] Length = 600 Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 134/602 (22%), Positives = 239/602 (39%), Gaps = 118/602 (19%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GIAL LV G+L+ I + P Sbjct: 54 PQLKIEIPANRYDLLCFEGIALMLNIFLGRQPLPNYKLVEPANGELQTIIVKEDTMKIRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITN 254 L S +I IKFD + + F +++ + N RQR LV I Sbjct: 114 LVSGAILRNIKFD---QARYESFI-----ALQDKLHQNLARQR----------TLVSIGT 155 Query: 255 YVSLDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDN 301 + LD ++A D+ L + +GE+++A ++ L SP Sbjct: 156 H-DLDTIQGPFTYEALPPKDIKFVPLNQTKEMNGEELMAFYEKDKHLGKYLHIIRDSPVY 214 Query: 302 VVIASDGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 VI R + S+ II G H+ +T +V +E+ D + + + + S+Y Sbjct: 215 PVIYDSKRTVCSLPPIINGDHSKITLDTKNVFIEITALDKTKVEIVNR-IIVSMFSQYTS 273 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 E P V +I T IA PR S + + G+++ Sbjct: 274 E---------PFTIEPVKVISDHNNETRVVPDIA------PRTTQAEVSYLNQCCGLELS 318 Query: 421 IEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---- 473 E+ +L+++ + D +V +P R DV +AD++E++ YG + + Sbjct: 319 PEEICTLLKKMAYDAKPSTASKDLIDVFIPPTRADVLHQADIMEDVAIAYGFNNLPRSFP 378 Query: 474 ------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 379 SKSGTIAQPLPINKLSDIVRMEAAMAGWSEVLPLILCSHDE----NFAWLNRKDD----- 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N + +FEVS V D Sbjct: 430 GNTAVKLANPKTLEFQVVRTSLLPGLLKTIRENKHHTVP-MKVFEVSDVAFKDLSLERKS 488 Query: 582 EGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFD-----AKADALSVIEPFVSL 635 +++ AA +SG E G L + + F+ + A AD+ IE Sbjct: 489 RNERHFAAAWYGKTSGFEVVHGLLDRVMAMLKSAFITGEEGLENPAMADSQYWIE----- 543 Query: 636 DSLRFESGAPSWYHPGRSGIIK---TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E P+++ PG + + E V+G FG HP +L+ + L P+ E+ ++ Sbjct: 544 -----ELDEPTYF-PGHAASVHVRIAGKEHVIGAFGILHPTVLENYELKYPVSTLEINVE 597 Query: 693 SI 694 + Sbjct: 598 AF 599 >gi|325958703|ref|YP_004290169.1| Phenylalanyl-tRNA synthetase subunit beta [Methanobacterium sp. AL-21] gi|325330135|gb|ADZ09197.1| Phenylalanyl-tRNA synthetase beta chain [Methanobacterium sp. AL-21] Length = 553 Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 129/593 (21%), Positives = 242/593 (40%), Gaps = 118/593 (19%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIP 201 SD D + V PNR D V GIA + + GL K S Sbjct: 33 SDIEHYDDENVKVEFFPNRPDYYSVDGIARTVRGFLGIETGLPDYK-------TSKSGYS 85 Query: 202 LEIKFDLDDSSLCKGFAMCCV--------KGVRN----NVAPNWM--RQRLK-AVGLRSI 246 + + +L+ L + F CC+ G+++ +W+ R R K A+G+ ++ Sbjct: 86 MTVDPELE---LIRPFTSCCIVEGIFIDEDGLKDIMDFQEDLHWVLGRDRKKVAIGIHNL 142 Query: 247 SALVDITNYVSLDRGYPSHV----FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNV 302 L NY++ + S + + + D+L + G+K L +++D P + Sbjct: 143 DVLTPPFNYIAAEPKENSFIALETTEEQNLDDILFNHK--KGKKYSHL-IEKFDKYP--L 197 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 + S G + S+ II G+ +N+ +VL++V D ER Sbjct: 198 IKDSKGNVLSMPPIINGELTKLTENSVNVLIDVTGTD---------------------ER 236 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI-------VFMNSEVK--- 412 V+ +I++ + GG I ++ YK R + MN +K Sbjct: 237 AVNFA------LNIIATSFAEAGGKIKTI----DMVYKDRTVETPDLSSKTMNVNIKTAE 286 Query: 413 RLSGIDVPIEDSLRILER--LGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++ G+D+ + +++LER LG V+ + + VP++R D+ + D++E I + + Sbjct: 287 KILGVDLDVNAVVKMLERVRLGAKVL-DSETVACEVPAYRIDILHEVDIIENIAIGHCIK 345 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGGQ 528 +I+ E ++ + N L ++R V+ ++ EV++ S+++ L Sbjct: 346 KIEPELPEISTIAYPDNARLFENR---VREIMIGMGFYEVMSLMLTSEDEHYKNLRLDED 402 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + + PIS D + +R SL+ GL++ N + IFEV V Y+ Sbjct: 403 DHVMVSQPISQDRTMIRKSLINGLMEFLEDNKHEELPQ-KIFEVGDV---------AYID 452 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G+ I+ ++ + F ++ S+ + F+ L+ E ++ Sbjct: 453 EAAETGTKIIK---KIACAVTHSTANFTEI-------KSITDAFILNLGLKME--IETFD 500 Query: 649 HP----GRSGIIKTSAEIV----LGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 HP GR ++ + E V +GYFGE P ++ F L P+ FE+ S Sbjct: 501 HPAFIRGRCARVEATGEAVEGSVVGYFGEVDPEVITNFELEYPVVAFEMEFKS 553 >gi|241889060|ref|ZP_04776364.1| phenylalanyl-tRNA synthetase beta chain [Gemella haemolysans ATCC 10379] gi|241864309|gb|EER68687.1| phenylalanyl-tRNA synthetase beta chain [Gemella haemolysans ATCC 10379] Length = 201 Score = 74.3 bits (181), Expect = 7e-11, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 3/107 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +VLS E++PD D + + + + +Q+VCGAPNV G V A G+ +P + + Sbjct: 92 FVVGEVLSCEKHPDADKLKVTEVKVNEEETLQIVCGAPNVEAGQKVVVALSGAMMP-SGL 150 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSA-SIMELPIDAPVGGRLSD 148 ++ K+RG+ES GM+CS++EL L + A I+ L D VG R+ D Sbjct: 151 LIKKSKLRGVESNGMLCSKRELGLPQEEARGILVLDADTKVGTRVKD 197 >gi|399667|emb|CAA52767.1| pheT [Erwinia chrysanthemi] Length = 193 Score = 74.3 bits (181), Expect = 8e-11, Method: Composition-based stats. Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 9/190 (4%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 VD +D K D +V+ L L F + + HPG++ I + E + GY G HP + Sbjct: 10 VDFYDLKGDLEAVLALTGKLSVLEFRAESHPALHPGQTAAIYLAGERI-GYIGVIHPELE 68 Query: 676 DFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVN 735 L+ FEV D + + +S + D+A +V + +PAG ++ Sbjct: 69 RKLALNGRTVVFEVLWDKL-----AERVVPEAADISRFPANRADIAVVVAESVPAGDVLA 123 Query: 736 IIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVEN 793 K V ++L+ V +FDV++GK + EG KS+AI +++Q T +++I + + V Sbjct: 124 ECKKVGANQLVG-VNLFDVYRGKGVAEGYKSLAISLVLQDTARTLAEEEIAATVAQCVAA 182 Query: 794 VVKKTNAVLR 803 + ++ A LR Sbjct: 183 LKQRFQASLR 192 >gi|16081656|ref|NP_394025.1| phenylalanyl-tRNA synthetase subunit beta [Thermoplasma acidophilum DSM 1728] gi|12644565|sp|P57694|SYFB_THEAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|10639719|emb|CAC11691.1| phenylalanyl-tRNA synthetase beta chain related protein [Thermoplasma acidophilum] Length = 543 Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 80/304 (26%), Positives = 124/304 (40%), Gaps = 63/304 (20%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++R G + E+++ L R+G+ Y + V VP +R DV +AD++E+IL+ G++ Sbjct: 281 IERYLGEKMDSEETITHLRRMGYVAEPGYPEIAVYVPGYRVDVMGEADIIEDILKSKGIE 340 Query: 471 QIKS---------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 I+ EPL + +V+D + + EV+ + Sbjct: 341 NIEEKQIFIGKFGEPLFMNKVKD------------LARDTMIGLGFQEVMTFVLSPASYL 388 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + GG R I NP S D S +R + P LL RN ++ IFE+ Sbjct: 389 QEYTGGVR---IQNPKSEDYSVIRDKIYPDLLDLIARNKKHSLPQ-RIFEI--------- 435 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 G K + R S C D + A S ++ F++ RF Sbjct: 436 -GDKIVGGKQRTALS----------------CVIADTRSEFSTAKSYMQGFLA----RFT 474 Query: 642 SGAPSWYHP-------GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 S P GRSG IK E ++G GE HP L+ F L+ P+ FE+ LD I Sbjct: 475 SENPVIVPQMIYGSIDGRSGSIKI-GEKIIGVIGEIHPAFLERFSLAVPVSFFEIDLDEI 533 Query: 695 PISQ 698 I+ Sbjct: 534 FIAN 537 >gi|222481074|ref|YP_002567311.1| phenylalanyl-tRNA synthetase, beta subunit [Halorubrum lacusprofundi ATCC 49239] gi|254781809|sp|B9LU47|SYFB_HALLT RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|222453976|gb|ACM58241.1| phenylalanyl-tRNA synthetase, beta subunit [Halorubrum lacusprofundi ATCC 49239] Length = 578 Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 79/313 (25%), Positives = 126/313 (40%), Gaps = 62/313 (19%) Query: 408 NSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEIL 464 + ++ L G+D E+ + ER G D+ +EV +P +R DV DLV+++ Sbjct: 301 HDRIETLLGVDFEPEEIVDCFERAGLDASYTLDEDVTYEVEIPPYRVDVLHPLDLVDDVG 360 Query: 465 RIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQ- 520 R YG D + EP + D + + R+R V+ L +++N+ S + Sbjct: 361 RAYGFDNL--EP----RYPDVGTVGGRHERSRLEDAVRTSLVGLGFEDLLNFHMTSGTEN 414 Query: 521 ---------SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S FGGG +EI P S + + +RT +P L+ RN A + E Sbjct: 415 YDRMNLEAGSDAFGGGN-PVEITEPYSEEYTQLRTWAIPSLVMLLERNTHNAYPQ-DVAE 472 Query: 572 VSHVYENDTPEG-----QKYMAAGI-RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 V E D E ++++A + R+ +S GRL + Sbjct: 473 VGFAAERDDSENTNVAERRHVAGAVARRDASYEAAKGRLQA------------------- 513 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 D R E P HP GR+ + E+V G GE HP +L L Sbjct: 514 --------VCDDFRAELETPRTEHPSFIDGRTAAVVIDGEVV-GVIGEVHPAVLVEHDLE 564 Query: 682 NPICGFEVYLDSI 694 P+ FE +LD++ Sbjct: 565 VPVAAFEFHLDAL 577 >gi|18977362|ref|NP_578719.1| phenylalanyl-tRNA synthetase subunit beta [Pyrococcus furiosus DSM 3638] gi|24418714|sp|Q8U260|SYFB_PYRFU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|18893043|gb|AAL81114.1| phenylalanyl-tRNA synthetase beta-chain [Pyrococcus furiosus DSM 3638] Length = 556 Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 125/564 (22%), Positives = 228/564 (40%), Gaps = 97/564 (17%) Query: 164 NRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCV 222 NR D G+A + A GL K +P K+++++S + V Sbjct: 55 NRPDLWSAEGVARQIRWALGLAK-------------GLP---KYEVEESDVV-----VYV 93 Query: 223 KGVRNNVAPNWMRQRLKAVGL--RSISALVDITNYVSLDRGYPSH-----VFDASRISDV 275 N+ P + ++ + L ++S L+ + V+L G +FD ++ Sbjct: 94 DKKLRNIRPYGVYAVVEGLKLDEEALSQLIQLQEKVALTYGRRRREVAIGIFDFDKVKPP 153 Query: 276 LTVRRACSGEKILAL----------------DNQEY-----DLSPDNVVIASDGRIQSIA 314 + R A EK + L +EY D +++ S+G + S+ Sbjct: 154 IYYRAAEKTEKFVPLGYSEEMTLEEILEKHEKGREYGHLIRDKPYYPLLVDSEGNVLSMP 213 Query: 315 GIIGGKHAG-CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL 373 II + G T +V V+V WD + + L +I + ERG ++ Sbjct: 214 PIINSELTGRVTTETKNVFVDVTGWDLRKVMLA---LNVIVTALA--ERGGKIKR----- 263 Query: 374 KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF 433 V +I T D+ P++ +++LSG+++ E+ +LER+ + Sbjct: 264 ---VKVIYPDFEITTPDLT--------PKEFEVSFEYIRKLSGLELSNEEIKELLERMMY 312 Query: 434 SV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ 492 V I +K +V P++R D+ D++E++L YG + I E P V+ + + + Sbjct: 313 EVEILSENKAKVKYPAFRDDIMHTRDVLEDVLIAYGYNNIDPEE-PKLAVQGRGDPF--K 369 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQREL-EILNPISADMSNMRTSLLP 550 ++ ++ + EV+ ++ SKE Q + E+ EI NPIS+ S +R LLP Sbjct: 370 DFEDAIRDLMVGFGLQEVMTFNLTSKEVQFDKMNIPEEEIVEIANPISSRWSALRKWLLP 429 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 L++ N IFEV D E ++ K + + GSG +++ E Sbjct: 430 SLMEFLSNNTHEEYPQ-RIFEVGLATLID--ESRETKTVSEPKLAVALAGSGYTFTNAKE 486 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 + D+ L + E + PGR G I + + G GE Sbjct: 487 -------ILDSLMRHLGI--------EYDIEETVHGSFIPGRVGKILVDGKEI-GIIGEI 530 Query: 671 HPNILDFFGLSNPICGFEVYLDSI 694 HP +L+ + + P+ FE++L + Sbjct: 531 HPQVLENWNIQVPVVAFEIFLKPL 554 >gi|168024649|ref|XP_001764848.1| predicted protein [Physcomitrella patens subsp. patens] gi|162683884|gb|EDQ70290.1| predicted protein [Physcomitrella patens subsp. patens] Length = 599 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 99/409 (24%), Positives = 166/409 (40%), Gaps = 55/409 (13%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY--- 358 V+ S R+ S+ II G H+ T +V +E D + A+ N + T S+Y Sbjct: 223 VIYDSKRRVLSLPPIINGAHSAISLKTKNVFIECTATD-LTKAKIVLNTMVTTFSQYSSP 281 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTA--SDICIARNITYKPRKIVFMNSEVKRLSG 416 +FE + PV ++S G +A D+ + R + + R+ G Sbjct: 282 QFE-------VEPVE------VISADGKSALYPDLSL--------RTFEVDMAYINRIIG 320 Query: 417 IDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 + ++ +L ++ + D + VS P R DV D+ E++ YG + I S Sbjct: 321 TSLGAKEVANLLNKMQLQTEVQSDSRIRVSAPPTRSDVLHACDVAEDVAIAYGYNNI-SR 379 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM---MEVVNWSFISKEQSVLF----GGGQ 528 +P + + K QQ + + A AM EVV W S+E++ G Sbjct: 380 TVPRSHTQGK-----QQPLNHFTDLIRAEVAMAGFTEVVTWILCSREENFTMVNRKDDGN 434 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----G 583 + I NP +AD +R+SLLPG+LK G N D A +FEVS + D+ + Sbjct: 435 TAVIIGNPRTADFEVVRSSLLPGMLKTMGSNKD-APRPLKLFEVSDIVRLDSKKDVGAVN 493 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +++AA +SG E L R ++ + + S D Sbjct: 494 SRHLAAIYSNMNSGFEVIHGLID-------RVFEVLGVRPAEFNKGSGTYSDDGYHIVPS 546 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y GR I + V G FG +P ++ F +++P E+ ++ Sbjct: 547 QEPEYFSGRQANIIYAGSCV-GSFGIVNPEVMLRFDITDPCSAVELNIE 594 >gi|288560842|ref|YP_003424328.1| phenylalanyl-tRNA synthetase subunit beta PheT [Methanobrevibacter ruminantium M1] gi|288543552|gb|ADC47436.1| phenylalanyl-tRNA synthetase subunit beta PheT [Methanobrevibacter ruminantium M1] Length = 551 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 118/566 (20%), Positives = 241/566 (42%), Gaps = 73/566 (12%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLK------EINISCPL 195 SD + D I V PNR D + V G+A + G+ K + ++ +S P Sbjct: 32 SDIEDYDDEEIKVEFFPNRPDNLSVEGVARSFKGFLGLETGIPKYEIVPSGEKVTVS-PE 90 Query: 196 SSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWM--RQRLK-AVGLRSISALVDI 252 +E P IKF ++ G + + + N+ +W+ R R K A+G+ + + Sbjct: 91 VAEIRPF-IKFAKIENVDFSGDKIKYIMDFQENL--HWVIGRDRKKVAIGVHNADVISGP 147 Query: 253 TNYVSLDRGYPSHVFDASRISDVLT----VRRACSGEKILALDNQEYDLSPDNVVIASDG 308 Y++ + + F A + + +T + + GEK L ++ +D P +++ D Sbjct: 148 YKYIATPKD--ENAFVALEMEEEMTPGEILTQHKKGEKYAHLIDK-FDKYP--LILDKDN 202 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQG 368 ++ S+ II G+ ++T +++V+V D I + ++ L I+ S Sbjct: 203 QVLSMPPIINGELTKLTEDTKNIIVDVTGTDEIAVTQA---LDILCAS------------ 247 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRIL 428 + + S+ I+ + T K K V ++ + + G D+ ED ++L Sbjct: 248 ----FAEVGGQVKSMEVEYEDRTVISPDFTPK-VKTVHVDLTNELIGGTDLSPEDIKKLL 302 Query: 429 ERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRN 487 E+ F I ++ EV +P +R D+ + D+VE I Y ++ ++++ +T V ++ N Sbjct: 303 EKARFDANILNENELEVFIPPYRVDILHEVDIVENITIQYHINAVEAKLPDITTVANEHN 362 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR--ELEILNPISADMSNMR 545 + +T ++ ++ E+++ S+E + +++ PI+ + +R Sbjct: 363 W-FKSEKT--IRELMVGLGFQEIMSLMLTSEESQYEKMNAEEIDHVQVSKPITISGTMIR 419 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 TSLL L++ N + + IFE+ V D + K +A +L Sbjct: 420 TSLLNSLMEFLEDNKHQDLPQ-KIFEIGDVLYMDESKENKTKSAK------------KLA 466 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG--IIKTSAEIV 663 F ++ + LS + ++ + + PGR+ I ++ + V Sbjct: 467 GMICHSSANFTEIKSTVSSVLSNLGY-----TMEISNSTNGSFIPGRAADVIGESKSGKV 521 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEV 689 +G+FGE P ++ F L P+ FE+ Sbjct: 522 VGFFGEISPEVIRNFELEYPVTAFEI 547 >gi|292657055|ref|YP_003536952.1| phenylalanyl-tRNA synthetase subunit beta [Haloferax volcanii DS2] gi|291370521|gb|ADE02748.1| phenylalanyl-tRNA synthetase beta subunit [Haloferax volcanii DS2] Length = 570 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 97/397 (24%), Positives = 162/397 (40%), Gaps = 74/397 (18%) Query: 336 ALWDPINIAR-----SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTA 388 A++D I + +G+ + TDSR G D Q I + +I+ L+ G T Sbjct: 209 AIYDEIGLFSFPPVINGRRTEVSTDSRDLLVELTGTD-QWTIDRMCNIICYALAARGATI 267 Query: 389 SDICIARNITYKPRKIVFMNSEV--KRLS--------GIDVPIEDSLRILERLGFSV--- 435 ++ + Y+ + + EV K +S G+++ +++ + + ER G Sbjct: 268 EEV----EVQYETGTVTKPDFEVETKHVSHDRIETVLGVELELDEVIDLFERSGLDANAE 323 Query: 436 IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT 495 +GE +EVS+P +R DV DLV+++ R YG +++ EP + D + + R+ Sbjct: 324 LGEETVYEVSIPPYRVDVLHPLDLVDDVGRAYGFNEL--EP----RYPDVGTVGQRHERS 377 Query: 496 RY---VKRVLASRAMMEVVNWSFISKEQ----------SVLFGGGQRELEILNPISADMS 542 R V+ L +++N+ IS+E+ S GGG+ I P S D + Sbjct: 378 RLEDAVRTSLVGLGFEDLLNFHMISEEENYERMDVEVGSDYLGGGE-PASITEPYSEDYT 436 Query: 543 NMRTSLLPGLLKATGRNVDRAI-ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGS 601 +RT +LP L N RA D A E+ HV D E + A R ++ + Sbjct: 437 MLRTWVLPSLTMVLENNTHRAYPQDLA--EIGHVAHRDDDENTRVAEA--RHVAAVLARH 492 Query: 602 GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIK 657 + D FDA + P+ HP GR+ + Sbjct: 493 DATYEDAKARLAALCRDFDADLE-------------------TPATDHPSFIDGRTAAVV 533 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E V G GE HP ++ L P+ FE L ++ Sbjct: 534 IDGEEV-GVVGELHPKVIVEHDLELPVAAFEFDLSAL 569 >gi|268530170|ref|XP_002630211.1| C. briggsae CBR-FRS-2 protein [Caenorhabditis briggsae] gi|187038923|emb|CAP22011.1| CBR-FARS-3 protein [Caenorhabditis briggsae AF16] Length = 591 Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 92/423 (21%), Positives = 164/423 (38%), Gaps = 86/423 (20%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q + + P V+ +G + S+ II G+H+ NT +V +E Sbjct: 216 QNHPVYP--VIYDKNGVVCSMPPIINGEHSKITLNTKNVFIEAT---------------- 257 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN------------ITYK 400 D Q VL IV+L C + + + Y Sbjct: 258 ----------ATDKQKAFVVLDTIVTLFSQYCAKPFTVEQVEVVYEETGVKEVYPLLAY- 306 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKAD 458 R++ E+ GI + E+ +L ++ V+G+ + +V VP R D+ D Sbjct: 307 -REMTVTTPEINTKIGIQLKEEEMATLLNKMSLKAEVVGK-ETLKVVVPPTRHDILHACD 364 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSF 515 + E++ YG + + +T++ + +++ + + +A+ E +N++ Sbjct: 365 VAEDVGVAYGYNNL------VTRLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFAL 418 Query: 516 ISKEQSVLFGGGQRELEIL-------NPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 S++ R+ E L NP + + RTSLLPGLLK N D + Sbjct: 419 CSRDD---ISTKLRQPEALSHAVHIGNPKTLEFQVARTSLLPGLLKTLASNRDMPLP-LK 474 Query: 569 IFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKA 623 +FE+ V D+ ++ +AA ++G E + + R +++ AKA Sbjct: 475 LFELQDVIVKDSTMDVGARNERRLAAVYYNKAAGFE----IIQGFLDRMMRMLNVNPAKA 530 Query: 624 DALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 D + E+ Y PGR I +VLG+ G HP ++ FGL+ P Sbjct: 531 D-----------NGYYIEADENPTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLP 579 Query: 684 ICG 686 CG Sbjct: 580 -CG 581 >gi|71020185|ref|XP_760323.1| hypothetical protein UM04176.1 [Ustilago maydis 521] gi|46100032|gb|EAK85265.1| hypothetical protein UM04176.1 [Ustilago maydis 521] Length = 621 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 133/636 (20%), Positives = 237/636 (37%), Gaps = 167/636 (26%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 + + + NR D + GI+ L LG + + I LS +EIK D + + Sbjct: 54 LKIDIPANRYDLLCHEGISRAL-NVFLGNIAQPQIK--LSQPENMIEIKLSKDVARIRPY 110 Query: 217 FAMCCVKGV-------------RNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGY 262 FA ++ V ++ + N R+R L A+G + + +Y +L Sbjct: 111 FAGAVLRNVSFTAESYAHFIDLQDKLHQNLARRRTLVAIGTHDLDTISAPFSYEALP--- 167 Query: 263 PSHV----------FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 P H+ +DAS++ ++ + S + D+ Y ++ S+ ++ S Sbjct: 168 PKHIKFAPLNKEQEYDASQLMELYESDKHLSRYLHIIRDSPVYP-----IIYDSNRQVLS 222 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 + II H+ +T +V ++ D LGI V Sbjct: 223 MPPIINSNHSKITLDTKNVFIDTTAID-------ETKLGI-------------------V 256 Query: 373 LKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK------------------RL 414 + IV++ C A T +P K+V+ + +VK R Sbjct: 257 INIIVAMFSQYC---------AEPFTVEPVKVVYPDGKVKVTPDLSNVRLPASVDYINRC 307 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYD----KFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 +G+ + + + L+++G S + D K V VP R D+ + DL+E++ +G D Sbjct: 308 TGLQLSPQQMIEYLKKMGHSATVDADAPTEKLIVDVPPTRPDILHECDLMEDVAVAFGFD 367 Query: 471 QIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 + + PLP+ ++ D V+R A +EV+ S +++ Sbjct: 368 NLPKTFPATNTVAAPLPINKLAD------------IVRRECAYSGWIEVLPLILCSHDEN 415 Query: 522 VLFG------GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 FG G + + NP +A+ +RTSLLPGLLK N A+ FEVS + Sbjct: 416 --FGWLKRKDDGTSAIVLENPKTAEYQVVRTSLLPGLLKTVRENRKHALP-LRTFEVSDI 472 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVS 634 D E + + + G ++ DK+ L D +L + P S Sbjct: 473 ALKDADE--------LERCARNQRHVGAVYCDKTASFEVVHGLLDRLMLSLDIARIPACS 524 Query: 635 ------------LDSLRFESG---------APSWYHPGRS---------------GIIKT 658 +D+ F G + Y+PG + + + Sbjct: 525 TVADKGYWIQQDVDNPTFLPGRAATIHVRLPATTYNPGSATHHAHALDTIKHDLESSLPS 584 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + VLG+ G HP++L+ F + P E LD + Sbjct: 585 HTDHVLGHIGVLHPHVLNNFSIDYPCSALEFILDPL 620 >gi|110589260|gb|ABG77139.1| phenylalanyl-tRNA synthetase beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 245 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 54/221 (24%), Positives = 103/221 (46%), Gaps = 15/221 (6%) Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 Q+ M AG+ GS S++ R VD FD KAD ++ + F + Sbjct: 38 QRQMLAGLITGSQ--------LSEQWGGAARAVDFFDLKADLEALFTLTGAGAGFAFSAA 89 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTK 703 HPG+S I+ + + G+ G HP + L FEV L+++ + Sbjct: 90 EHPALHPGQSAAIEFAGRQI-GWIGMLHPALEQQLDLDGSTYLFEVELEAL-----NAGR 143 Query: 704 TKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGK 762 LS ++RD+A ++D IP + ++ ++ D+ +FDV+ G+ + G+ Sbjct: 144 LPAFAPLSKFPSIRRDIALLMDAEIPFDRVKRCVQTAAPEIVKDIRLFDVYTGEKVDSGR 203 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 KS+A+ +++Q T D+++ ++D +++ + + A LR Sbjct: 204 KSLALGLILQESSHTLTDEEVDAVVDAVLKRLADELGAKLR 244 >gi|289673306|ref|ZP_06494196.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 128 Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats. Identities = 38/75 (50%), Positives = 48/75 (64%) Query: 231 PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILAL 290 P WM +RL+ +RSI A VDITNYV L+ G P H FD + I+ + VR A GEK++ L Sbjct: 54 PLWMVERLRRSDVRSIDAAVDITNYVMLELGQPLHAFDLAEINGGIRVRMAEEGEKLVLL 113 Query: 291 DNQEYDLSPDNVVIA 305 D QE L D +VIA Sbjct: 114 DGQEVSLRADTLVIA 128 >gi|258576669|ref|XP_002542516.1| phenylalanyl-tRNA synthetase, beta subunit [Uncinocarpus reesii 1704] gi|237902782|gb|EEP77183.1| phenylalanyl-tRNA synthetase, beta subunit [Uncinocarpus reesii 1704] Length = 559 Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 99/420 (23%), Positives = 176/420 (41%), Gaps = 64/420 (15%) Query: 298 SPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 SP VI R+ S+ II G H+ NT +V +E+ D + N+ + S Sbjct: 176 SPVYPVIYDSKRVVCSLPPIINGDHSKITLNTKNVFMEITATDKTKV-EVVNNMMMAMFS 234 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 +Y E P + +I G T +A NIT PR S + + G Sbjct: 235 QYTSE---------PFTIEPIKIISDHNGQTR----LAPNIT--PRSTQASISYINQCCG 279 Query: 417 IDVPIEDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 +++ ++ +L+++ + D +V +P R DV +AD++E++ YG +++ Sbjct: 280 LELSAQEICDLLKKMAYIARPSKSSTDLIDVEIPMTRADVLHEADIMEDVAIAYGFNELP 339 Query: 474 ----------SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 340 RSFPSKSGTIAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD- 394 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--- 579 G +++ NP + + +RTSLLPGLLK N ++ IFEVS V D Sbjct: 395 ----GNTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKSHSVP-IKIFEVSDVAFKDLSL 449 Query: 580 --TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +++ AA +SG E L R + + + A V E LD+ Sbjct: 450 ERKSRNERHFAAAWYGRTSGFEVVHGLLD-------RVMAMLKS---AFIVGEE--GLDN 497 Query: 638 LRFESGAPSWY-----HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 SG+ W H + E ++G FG HP +L+ F L P+ E+ ++ Sbjct: 498 PEV-SGSRYWIEELEGHAASIHVCIGGKEHIIGTFGILHPTVLEKFELKYPVSTLEMNIE 556 >gi|301633476|gb|ADK87030.1| tRNA binding domain protein [Mycoplasma pneumoniae FH] Length = 209 Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 43 PFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 PF + +V+S P+ +++TG ++ + VVCGA NVRVGL V G +P+ Sbjct: 83 PFVVCEVISAIPIPNTHLKRCKVNTGSNKSLDVVCGADNVRVGLKTVLVHVGGVLPDGT- 141 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD-YLELSD 154 I+ KI G +S GM+CSEKEL L + I+E+ +G D YL S+ Sbjct: 142 IIKKAKIAGYDSMGMLCSEKELHLKPKNQGIIEIKSHIKIGKSFLDVYLNNSE 194 >gi|257052749|ref|YP_003130582.1| phenylalanyl-tRNA synthetase subunit beta [Halorhabdus utahensis DSM 12940] gi|256691512|gb|ACV11849.1| phenylalanyl-tRNA synthetase, beta subunit [Halorhabdus utahensis DSM 12940] Length = 576 Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/381 (24%), Positives = 156/381 (40%), Gaps = 60/381 (15%) Query: 346 SGKNLGIITDSRYRF--ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA--------R 395 +G+ + TDSR F G D Q I + IV L GGT D+ + R Sbjct: 223 NGRRTEVSTDSRDLFIEMTGTD-QWTIDHMLSIVCYALDARGGTIEDVRVEYEDAPEEYR 281 Query: 396 NITYKP----RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK------FEVS 445 + +P + + ++R GID+ ED + +LER G GE + ++V+ Sbjct: 282 DSLLRPDFSTKTKTVAHDRIERTLGIDLQGEDVIDLLERSGLD--GESTETDGSPAYDVT 339 Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS-LQQSRTRYVKRVLAS 504 +P +R DV D+++++ R YG + + + + + + L+++ V+ VL Sbjct: 340 IPPYRVDVLHPVDVIDDVGRAYGFNNLDPRYPAVGTIGGRHERARLEEA----VRTVLVG 395 Query: 505 RAMMEVVNWSFISKEQ---------SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 +++N+ S E+ V GG +EI NP S D + +RT LLP +++ Sbjct: 396 LGFQDLLNFHLTSAEELHDRMGIEPGVDALGGGDPVEIRNPYSEDYTVVRTWLLPSIMQV 455 Query: 556 TGRNVDRAI-ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N R D A EV V + D +G A R + + + D Sbjct: 456 LENNTHRRYPQDLA--EVGFVAQRD--DGANTGVAEARHVAGALARHDVSYEDAKARLQA 511 Query: 615 FVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 V FDA+ + P F+ GR+ ++ + V G GE HP Sbjct: 512 LVADFDAELETPPTAHPSFID----------------GRAAAVEIDGDAV-GVIGEVHPA 554 Query: 674 ILDFFGLSNPICGFEVYLDSI 694 +L L P+ FE L ++ Sbjct: 555 VLVEHDLELPVVAFEFDLAAL 575 >gi|13508402|ref|NP_110352.1| hypothetical protein MPN663 [Mycoplasma pneumoniae M129] gi|2496450|sp|P75128|Y663_MYCPN RecName: Full=Uncharacterized protein MG449 homolog gi|1673842|gb|AAB95827.1| conserved hypothetical protein [Mycoplasma pneumoniae M129] Length = 234 Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 2/113 (1%) Query: 43 PFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 PF + +V+S P+ +++TG ++ + VVCGA NVRVGL V G +P+ Sbjct: 108 PFVVCEVISAIPIPNTHLKRCKVNTGSNKSLDVVCGADNVRVGLKTVLVHVGGVLPDGT- 166 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD-YLELSD 154 I+ KI G +S GM+CSEKEL L + I+E+ +G D YL S+ Sbjct: 167 IIKKAKIAGYDSMGMLCSEKELNLKPKNQGIIEIKSHIKIGKSFLDVYLNNSE 219 >gi|294495977|ref|YP_003542470.1| phenylalanyl-tRNA synthetase subunit beta [Methanohalophilus mahii DSM 5219] gi|292666976|gb|ADE36825.1| phenylalanyl-tRNA synthetase beta subunit [Methanohalophilus mahii DSM 5219] Length = 539 Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 122/574 (21%), Positives = 221/574 (38%), Gaps = 94/574 (16%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 +D L + ID+ P+R D V G++ + G ++ + + + EI Sbjct: 31 ADIERLEEKSIDIEFFPDRPDLYSVEGVSRAM--RGFMDIETGPVKYDIKHSDV--EISL 86 Query: 207 DLDDSSLCKGFAMCCVKGVRNNVAP-----------NWM--RQRLK-AVGLRSISALVDI 252 D D ++ A V+GV+ + +W R R K ++G+ +S + Sbjct: 87 DDDIKNIRPVLACAIVRGVKFTESSIKALMDLQESLHWGLGRDRKKVSIGVHDLSRIKPP 146 Query: 253 TNYVSLDRGY---PSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 Y+ D P + ++D+L R G + L + Y P +++ + + Sbjct: 147 FRYIGADPSVEFVPLDFTEPMSLADIL--ERHPKGTRFAPL-LEGYSKYP--LILDAKDQ 201 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVA-----LWDPINIARSGKNLGIITDSRYRFERGV 364 + S II G D NTTD+ ++V ++ +NI + + D R E Sbjct: 202 VLSFPPIINGTLTMVDKNTTDLFIDVTGLSAEVYTALNIV-----VAALADRGGRIE--- 253 Query: 365 DLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDS 424 S+ ++ G + P K + EVK L G+D ++ Sbjct: 254 -------------SVKINYPDGESK-----FTPDLSPEKRIISMDEVKSLIGMDFTSDEV 295 Query: 425 LRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 L R+ ++ + E+ +P +R D+ D++E+I G D I++ + Sbjct: 296 ASHLRRMRYAASPAGTNVVEIEIPPYRADILHNYDIIEDIAISVGFDNIEAIFPSTSTTG 355 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPIS 538 + LSL Q R ++ EV+ ++ S + V F +R +++PIS Sbjct: 356 EAHPLSLIQDNIR---EIMVGLGYSEVMPFTLTS--EKVHFDNMRRPHTEDVTPVMHPIS 410 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 D + +RT+LLP L+ N + IFEV N A + ++ I Sbjct: 411 EDQTMIRTTLLPNQLEILSLNQHHELPQ-RIFEVGEAIVN--------CANKLHLAATSI 461 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EE VD + + + P S P++ ++ I+ Sbjct: 462 HALANF-----EEIREIVDSMMLERNIPYSVSP----------SEDPAFIEGRKADILVN 506 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ G GE HP ++ FGL P+ GFE+ LD Sbjct: 507 GTKV--GVMGEIHPQVILNFGLGQPVVGFEINLD 538 >gi|307270463|ref|ZP_07551764.1| tRNA binding domain protein [Enterococcus faecalis TX4248] gi|306513241|gb|EFM81872.1| tRNA binding domain protein [Enterococcus faecalis TX4248] Length = 206 Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSETLEKDDTSKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|254671877|emb|CBA04117.1| phenylalanyl-tRNA synthetase beta chain [Neisseria meningitidis alpha275] Length = 101 Score = 72.0 bits (175), Expect = 4e-10, Method: Composition-based stats. Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 2/96 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++PD D Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAGVVIAEVKSVEKHPDAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG 94 + ++D G + +Q+VCGAPNV+ G+ + PG Sbjct: 61 RLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPG 96 >gi|126338190|ref|XP_001365748.1| PREDICTED: similar to phenylalanine-tRNA synthetase-like, beta subunit [Monodelphis domestica] Length = 589 Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 88/408 (21%), Positives = 155/408 (37%), Gaps = 67/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ T +V +E Sbjct: 223 VIYDSNGVVLSMPPIINGDHSKITLKTRNVFIECT------------------------- 257 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G DL VL IV++ C A+++ +Y ++ + VK Sbjct: 258 -GTDLTKAKIVLDVIVTMFSEYCEKQFTVEAAEVIYPNGKSYLYPELAYRKEMVKADLIN 316 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 317 KQIGISETPASLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 376 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + ++ L+ T ++ LA+ E + ++ S+E G Sbjct: 377 NIQMTIPKTYTIANQLPLN---KLTELLRHDLAAAGFTETLTFALCSQEDIADKLGMDIS 433 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE---- 582 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ + Sbjct: 434 ATKAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVLKDSSKDVGA 492 Query: 583 -GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L D PF + Sbjct: 493 RNHRHLCAVYYNKNPGFEVIHGLLD-------RIMQLLDV---------PFGEDKGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + S + PGR + + V G G HP+++ F L+ P E+ Sbjct: 537 AAEGSAFFPGRCAEVFAKGQSV-GKLGVLHPDVITKFELTMPCSALEI 583 >gi|302348137|ref|YP_003815775.1| phenylalanyl-tRNA synthetase subunit beta [Acidilobus saccharovorans 345-15] gi|302328549|gb|ADL18744.1| phenylalanyl-tRNA synthetase subunit beta [Acidilobus saccharovorans 345-15] Length = 558 Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 33/300 (11%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 K R++ + V R+ G D+ +++ L ++ S E +V++P +R D+ + DL Sbjct: 274 KSRELSLDINYVNRVLGTDLTVDEVTLSLLKMRHSASPENGHVKVTIPPFRYDIISEIDL 333 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS-RTRYVKRVLASRAMMEVVNWSFISK 518 VE+I G D K LP + D R L + +R + ++A EV+++ S Sbjct: 334 VEDIAMALGYDSPKL--LPSKYMNDARGSLLDHTLLSRAARDIMAGLGFTEVMSYILTSS 391 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE- 577 LF +E+ NP+ ++ +R SL+P LL+ NV + IFE+ + Sbjct: 392 SLLRLFDMISDTVELKNPVQEELDALRPSLVPQLLQLMFFNVSKT-KPVNIFEIGKTVKK 450 Query: 578 --NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 ++ E K AA + S + D F+ F K A +P + Sbjct: 451 IGSEAVEDLKLAAATMDDSVS--------YEDIQAVAYAFIRSFGLKPSA----KPLTA- 497 Query: 636 DSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 SW GRS ++ EI G GE +P ILD ++ P+ FE+ L + Sbjct: 498 ----------SWLLAGRSASLLANGHEI--GVIGEINPVILDKLNVTYPVAVFELSLTEL 545 >gi|254173738|ref|ZP_04880410.1| phenylalanyl-tRNA synthetase, beta subunit [Thermococcus sp. AM4] gi|214032430|gb|EEB73260.1| phenylalanyl-tRNA synthetase, beta subunit [Thermococcus sp. AM4] Length = 568 Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 57/403 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +++ S+G++ S+ II + G T +V V+V WD +N N+ + + Sbjct: 201 LLVDSEGKVLSMPPIINSETTGRVTTETRNVFVDVTGWD-LNKVMLALNVVVTALA---- 255 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERG ++ V ++ D+ P+ +++L+G+++ Sbjct: 256 ERGGKIRS--------VKVVYPDFEIETPDLT--------PKSFEVELDYIRKLTGLELS 299 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPL 479 + +LER+ + V E K ++ P++R D+ D++E++L YG ++I+ EP Sbjct: 300 DGEIKDLLERMMYEVKLEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNEIEPEEPKLA 359 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----------LFGGGQR 529 Q + + + + V+ ++ + EV+ ++ ++E F Sbjct: 360 VQGRGDKFVEFEDA----VRELMVGFGLQEVMTFNLTNREAQYEKMNLQYGRDYFNNPPA 415 Query: 530 EL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 EL EI NPIS S +R LLP LL +N +FEV D EG++ Sbjct: 416 ELVEIENPISPKWSALRNWLLPSLLDFLSQNTHEEYPQ-RLFEVGKATLID--EGRETKT 472 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 K + + ++ R F D + L + + + E PS + Sbjct: 473 VSESKLAVVL----------AQPRVTFTD----AKEILDSVMRHLGFEYELEEVEHPS-F 517 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 PGR G + + + + G GE HP +L+ +G+ P+ GFE++L Sbjct: 518 IPGRVGKVIVNGQTI-GVIGEIHPAVLEKWGIEMPVAGFELFL 559 >gi|147918978|ref|YP_687295.1| phenylalanyl-tRNA synthetase subunit beta [uncultured methanogenic archaeon RC-I] gi|121682805|sp|Q0W0X4|SYFB_UNCMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|110622691|emb|CAJ37969.1| phenylalanyl-tRNA synthetase, beta chain [uncultured methanogenic archaeon RC-I] Length = 553 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 96/399 (24%), Positives = 160/399 (40%), Gaps = 61/399 (15%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 +I D I S II K NT D+L+E+ Sbjct: 198 IITDDEGIFSFPPIINSKRTEVTLNTHDLLIELT-------------------------- 231 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGT--ASDICIARNITYKP----RKIVFMNSEVKRLSG 416 G DL+ I + +IV L L G + + D+ ++P R I V R+ G Sbjct: 232 GEDLR-TIDYMLNIVLYSLDLRGASIYSIDVVYPDETLHRPDFNVRNIDIEVDYVNRVLG 290 Query: 417 IDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 +++ D +LER+GF V D V VP +R D+ K D+V+++ R +G + I + Sbjct: 291 LELTAPDIKALLERMGFKVAETGSDYLIVEVPPYRADILHKRDVVDDVGRAFGYNNI-TP 349 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-----RE 530 P T K L+ ++ + + N+ I K++ +FG Sbjct: 350 SYPNTPSVGK--LTEATKLGDAIRNTMIGLGCQDTFNFILIGKDE--VFGKMNLPDDGTA 405 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +EI NP + + +RTSL+P L+ N+ R IFEV V D+ E Sbjct: 406 VEISNPYAEQYNIVRTSLIPSLMIVLSNNLHRDYPQ-NIFEVGTVAHLDSAE-------- 456 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 ++G++ + + F ++ K S+ F LD L+ + + P Sbjct: 457 ----NTGVKEIDHVACTLCYAKAGFNEI---KVKLQSLCANFGKLDELKTVAAEHPSFIP 509 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 GR ++ + V G GE P +L +G+ P+ FE+ Sbjct: 510 GRCAEVRIGDKKV-GIIGELSPVVLKSWGIEMPVAAFEM 547 >gi|229548111|ref|ZP_04436836.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis ATCC 29200] gi|312905339|ref|ZP_07764454.1| tRNA binding domain protein [Enterococcus faecalis TX0635] gi|229306797|gb|EEN72793.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis ATCC 29200] gi|310631363|gb|EFQ14646.1| tRNA binding domain protein [Enterococcus faecalis TX0635] gi|315027654|gb|EFT39586.1| tRNA binding domain protein [Enterococcus faecalis TX2137] gi|315143328|gb|EFT87344.1| tRNA binding domain protein [Enterococcus faecalis TX2141] gi|315148923|gb|EFT92939.1| tRNA binding domain protein [Enterococcus faecalis TX4244] gi|315154750|gb|EFT98766.1| tRNA binding domain protein [Enterococcus faecalis TX0043] gi|315162517|gb|EFU06534.1| tRNA binding domain protein [Enterococcus faecalis TX0645] Length = 226 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|227517349|ref|ZP_03947398.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis TX0104] gi|227075219|gb|EEI13182.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis TX0104] Length = 226 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|307286435|ref|ZP_07566541.1| tRNA binding domain protein [Enterococcus faecalis TX0109] gi|306502448|gb|EFM71721.1| tRNA binding domain protein [Enterococcus faecalis TX0109] gi|315164479|gb|EFU08496.1| tRNA binding domain protein [Enterococcus faecalis TX1302] gi|315173486|gb|EFU17503.1| tRNA binding domain protein [Enterococcus faecalis TX1346] Length = 226 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|303316824|ref|XP_003068414.1| phenylalanyl-tRNA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] gi|240108095|gb|EER26269.1| phenylalanyl-tRNA synthetase beta chain, putative [Coccidioides posadasii C735 delta SOWgp] Length = 600 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 95/415 (22%), Positives = 173/415 (41%), Gaps = 57/415 (13%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 ++ S+ + S+ II G H+ +T +V +E+ D + N+ + S+Y E Sbjct: 216 IIYDSNRTVCSLPPIINGDHSKITLDTRNVFMEITATDKTKV-EVVNNIMVAMFSQYTSE 274 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P + ++ T NI KPR S + + G+++ Sbjct: 275 ---------PFTIEPIQVVSEHNNETRQ----VPNI--KPRLTQASISYINQCCGLNLSA 319 Query: 422 EDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--- 473 ++ +L+++ + I ++ K +V VP R DV +AD++E++ YG +++ Sbjct: 320 QEICDLLKKMAY--IAKHSKSSADLIDVEVPITRADVLHEADIMEDVAIAYGFNELPRSF 377 Query: 474 -------SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 ++PLP+ ++ D R + + + +L S N+++++++ Sbjct: 378 PSKSGTIAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD---- 429 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP---- 581 G +++ NP + + +RTSLLPGLLK N + IFEVS V D Sbjct: 430 -GNTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKSHTVP-MRIFEVSDVAFKDMTLERK 487 Query: 582 -EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF 640 +++ AA +SG E L D+ + F + L P VS Sbjct: 488 SRNERHFAAAWYGRTSGFEVVHGLL-DRVMAMLK--SAFIVGEEGLD--NPDVSGSRYWI 542 Query: 641 ESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E Y PG + I E V+G FG HP +L+ F L P+ E+ ++ Sbjct: 543 EELEDPTYFPGHAASIHVCIGGKEHVIGTFGILHPTVLEKFELKYPVSTLEMNIE 597 >gi|307273903|ref|ZP_07555115.1| tRNA binding domain protein [Enterococcus faecalis TX0855] gi|307276737|ref|ZP_07557854.1| tRNA binding domain protein [Enterococcus faecalis TX2134] gi|306506636|gb|EFM75789.1| tRNA binding domain protein [Enterococcus faecalis TX2134] gi|306509382|gb|EFM78440.1| tRNA binding domain protein [Enterococcus faecalis TX0855] gi|315152886|gb|EFT96902.1| tRNA binding domain protein [Enterococcus faecalis TX0031] gi|315157460|gb|EFU01477.1| tRNA binding domain protein [Enterococcus faecalis TX0312] Length = 226 Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSEILEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|29377487|ref|NP_816641.1| tRNA-binding domain-containing protein [Enterococcus faecalis V583] gi|227554453|ref|ZP_03984500.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis HH22] gi|229547541|ref|ZP_04436266.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis TX1322] gi|256618210|ref|ZP_05475056.1| tRNA-binding domain-containing protein [Enterococcus faecalis ATCC 4200] gi|256761139|ref|ZP_05501719.1| tRNA-binding domain-containing protein [Enterococcus faecalis T3] gi|256854708|ref|ZP_05560072.1| tRNA-binding domain-containing protein [Enterococcus faecalis T8] gi|256958312|ref|ZP_05562483.1| tRNA-binding domain-containing protein [Enterococcus faecalis DS5] gi|257078378|ref|ZP_05572739.1| hypothetical protein EFIG_01955 [Enterococcus faecalis JH1] gi|257080558|ref|ZP_05574919.1| hypothetical protein EFJG_02239 [Enterococcus faecalis E1Sol] gi|257083293|ref|ZP_05577654.1| tRNA-binding domain-containing protein [Enterococcus faecalis Fly1] gi|257088152|ref|ZP_05582513.1| t-RNA-binding domain-containing protein [Enterococcus faecalis D6] gi|257091279|ref|ZP_05585640.1| tRNA-binding protein [Enterococcus faecalis CH188] gi|257417178|ref|ZP_05594172.1| tRNA-binding domain-containing protein [Enterococcus faecalis AR01/DG] gi|257420500|ref|ZP_05597490.1| tRNA-binding protein [Enterococcus faecalis X98] gi|294780163|ref|ZP_06745535.1| tRNA binding domain protein [Enterococcus faecalis PC1.1] gi|300861493|ref|ZP_07107577.1| tRNA binding domain protein [Enterococcus faecalis TUSoD Ef11] gi|307292052|ref|ZP_07571919.1| tRNA binding domain protein [Enterococcus faecalis TX0411] gi|29344954|gb|AAO82711.1| putative tRNA-binding domain protein [Enterococcus faecalis V583] gi|227176363|gb|EEI57335.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis HH22] gi|229307383|gb|EEN73370.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecalis TX1322] gi|256597737|gb|EEU16913.1| tRNA-binding domain-containing protein [Enterococcus faecalis ATCC 4200] gi|256682390|gb|EEU22085.1| tRNA-binding domain-containing protein [Enterococcus faecalis T3] gi|256710268|gb|EEU25312.1| tRNA-binding domain-containing protein [Enterococcus faecalis T8] gi|256948808|gb|EEU65440.1| tRNA-binding domain-containing protein [Enterococcus faecalis DS5] gi|256986408|gb|EEU73710.1| hypothetical protein EFIG_01955 [Enterococcus faecalis JH1] gi|256988588|gb|EEU75890.1| hypothetical protein EFJG_02239 [Enterococcus faecalis E1Sol] gi|256991323|gb|EEU78625.1| tRNA-binding domain-containing protein [Enterococcus faecalis Fly1] gi|256996182|gb|EEU83484.1| t-RNA-binding domain-containing protein [Enterococcus faecalis D6] gi|257000091|gb|EEU86611.1| tRNA-binding protein [Enterococcus faecalis CH188] gi|257159006|gb|EEU88966.1| tRNA-binding domain-containing protein [Enterococcus faecalis ARO1/DG] gi|257162324|gb|EEU92284.1| tRNA-binding protein [Enterococcus faecalis X98] gi|294452706|gb|EFG21136.1| tRNA binding domain protein [Enterococcus faecalis PC1.1] gi|295114369|emb|CBL33006.1| EMAP domain [Enterococcus sp. 7L76] gi|300848954|gb|EFK76707.1| tRNA binding domain protein [Enterococcus faecalis TUSoD Ef11] gi|306496834|gb|EFM66384.1| tRNA binding domain protein [Enterococcus faecalis TX0411] gi|315028269|gb|EFT40201.1| tRNA binding domain protein [Enterococcus faecalis TX4000] gi|315033628|gb|EFT45560.1| tRNA binding domain protein [Enterococcus faecalis TX0017] gi|315036499|gb|EFT48431.1| tRNA binding domain protein [Enterococcus faecalis TX0027] gi|315573321|gb|EFU85512.1| tRNA binding domain protein [Enterococcus faecalis TX0309B] gi|315581248|gb|EFU93439.1| tRNA binding domain protein [Enterococcus faecalis TX0309A] gi|329571166|gb|EGG52872.1| tRNA binding domain protein [Enterococcus faecalis TX1467] Length = 206 Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|327536159|gb|AEA94993.1| tRNA binding domain protein [Enterococcus faecalis OG1RF] Length = 226 Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVENG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|321311028|ref|YP_004193357.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma haemofelis str. Langford 1] gi|319802872|emb|CBY93518.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma haemofelis str. Langford 1] Length = 643 Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 21/197 (10%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD----CAILRIDTGKH 70 D S+E+I L G+EVE VD +A + + S E+ D C +L GK Sbjct: 17 DYSIEQITSALFKSGIEVEAVDEIKAPNGVVYGLIESFEKVEGSDKLNFCKVLIPSEGKV 76 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS-----EKELM 125 ++I VCGA NVR L V A PG+ + + + RK+ G S GM+C+ E +L+ Sbjct: 77 RDI--VCGASNVRNNLKVVVALPGASLLGGKVKIQERKVFGKLSRGMICAYGELHEFKLI 134 Query: 126 LSDDSASIMELPIDAPVGGRLS-DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLG 184 S+ I+ELP D + S ++ L D ++D+S+ NR+D GIA +L Sbjct: 135 GSNFPKGIIELPDDFDINRPFSLSHICLDDVVLDLSIPTNRNDLHCAWGIAEELAK---- 190 Query: 185 KLKEINISCPLSSESIP 201 N+ CP +P Sbjct: 191 -----NLGCPHEEGDVP 202 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 37/209 (17%) Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVP-IE------DSLRILERLGFS------VIGEYD 440 ++T++ + F + L GID+P +E D RILE L S +I Sbjct: 246 GNSLTFREKSNYFSLLLNRYLQGIDIPELEGRRIPIDWRRILEFLCISCELKESLISRLK 305 Query: 441 KFEVSV-------PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 + S P WR D++++ D EE+ R + ++ P P+T LSL + Sbjct: 306 NYSFSFEEDFVIPPRWRDDIQDQKDFAEEVARFMDIGDLEERP-PVTY------LSLPDN 358 Query: 494 RTRY----VKRVLASRAMMEVVNWSF----ISKEQSVLFGGGQRELEILNPISADMSNMR 545 + + +K L SR E +++ + + L+G +E NPIS+D + R Sbjct: 359 KGIFELLRIKSFLRSRGFFECSSFNLQDGNLVRNSFHLWGEDTHTVE--NPISSDRVSYR 416 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSH 574 L LL N D + +FE+++ Sbjct: 417 RHGLYELLSVLEFNKDDGMEMHPVFEITY 445 >gi|167948155|ref|ZP_02535229.1| phenylalanyl-tRNA synthetase, beta subunit [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 205 Score = 71.2 bits (173), Expect = 7e-10, Method: Composition-based stats. Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 7/204 (3%) Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 +G S++ R VD FD KAD ++ + F + HPG+S I+ + Sbjct: 7 TGSQLSEQWGGAARAVDFFDLKADLEALFTLTGAGAGFAFSAAEHPALHPGQSAAIEFAG 66 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 + G+ G HP + L FEV L+++ + LS ++RD+ Sbjct: 67 RQI-GWIGMLHPALEQQLDLDGSTYLFEVELEAL-----NAGRLPAFAPLSKFPSIRRDI 120 Query: 721 AFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFR 779 A ++D IP + ++ ++ D+ +FDV+ G+ + G+KS+A+ +++Q T Sbjct: 121 ALLMDAEIPFDRVKRCVQTAAPEIVKDIRLFDVYTGEKVDSGRKSLALGLILQESSHTLT 180 Query: 780 DDDIRILMDRIVENVVKKTNAVLR 803 D+++ ++D +++ + + A LR Sbjct: 181 DEEVDAVVDAVLKRLADELGAKLR 204 >gi|315578525|gb|EFU90716.1| tRNA binding domain protein [Enterococcus faecalis TX0630] Length = 220 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/135 (37%), Positives = 75/135 (55%), Gaps = 10/135 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVG 143 A I+ELP DA VG Sbjct: 205 AKKGILELPFDAEVG 219 >gi|255974337|ref|ZP_05424923.1| tRNA-binding domain-containing protein [Enterococcus faecalis T2] gi|307278176|ref|ZP_07559258.1| tRNA binding domain protein [Enterococcus faecalis TX0860] gi|255967209|gb|EET97831.1| tRNA-binding domain-containing protein [Enterococcus faecalis T2] gi|306505165|gb|EFM74353.1| tRNA binding domain protein [Enterococcus faecalis TX0860] Length = 206 Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSEILEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|11499019|ref|NP_070253.1| phenylalanyl-tRNA synthetase subunit beta [Archaeoglobus fulgidus DSM 4304] gi|12644558|sp|O28848|SYFB_ARCFU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|2649146|gb|AAB89822.1| phenylalanyl-tRNA synthetase, subunit beta (pheT) [Archaeoglobus fulgidus DSM 4304] Length = 547 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 132/573 (23%), Positives = 233/573 (40%), Gaps = 90/573 (15%) Query: 148 DYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFD 207 D + D +DV PNR D V G+A L LG K + S ++ E K Sbjct: 32 DIERVEDDHVDVEFFPNRPDLYSVEGVARAL-RGFLGIEKGLK-----SYSAVKGEWKIT 85 Query: 208 LDDSSLC--KGFAMCCVKGVR--NNVAPNWM-----------RQRLK-AVGLRSISALVD 251 +++S L C VKG+R + V + M R R K A+G+ +S + Sbjct: 86 VEESVLAVRPRIVGCVVKGIRMTDEVIRSLMEVQEDLHWTIGRNRRKMAIGVHDLSKVYF 145 Query: 252 ITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQ 311 Y ++D + D R V + K A + D P +++ S + Sbjct: 146 PLRYKAVDANFSFVPLDFDREMTVAEILEEHPKGKAYAFILEGKDSYP--MIVDSKDEVI 203 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S II + + TTD+ ++V +D N+ R+ L + +RG ++ + Sbjct: 204 SFPPIINAEKTRVTEETTDLFIDVTGFDE-NVDRAIAILACMLA-----DRGGRIESVEV 257 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMN---SEVKRLSGIDVPIEDSLRIL 428 V V L +L + FM EV L G+ + E+ L Sbjct: 258 VYPDHVELTPNL-------------------DVRFMEVDVDEVNSLLGLSLSAEEIKESL 298 Query: 429 ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL 488 E++ FS E +K +V +P +R D+ + D++E++ YG + I E P R Sbjct: 299 EKMRFSCEIEGEKLKVGIPPYRADIMHEWDVIEDVAIGYGYENITPEIPPTLTF--GRTH 356 Query: 489 SLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE-------ILNPISADM 541 R+ K ++ EV+ +F ++V++ +R+ E +++P++ + Sbjct: 357 PWNDIRS-LAKEIMIGLGFTEVI--TFTLTNEAVMYEKMRRKGEPWKDYVPVMHPLTTEH 413 Query: 542 SNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGS 601 + +RTSLLP LL+ N + +FEV V N + + ++AA I Sbjct: 414 TILRTSLLPKLLELLSYNKHHEMPQM-VFEVGDVVVNS--KNRLHLAACI---------- 460 Query: 602 GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 + R F ++ ++ +V+ +R ES ++ R+ I+ Sbjct: 461 -------THSRANFSEI---RSYVQAVMRELDLTWEVR-ESDDEAFIDGRRAEIVVDGKA 509 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + G FGE HP +L+ F L+ P+ FE+ L + Sbjct: 510 V--GVFGEVHPEVLEGFELTMPVSAFEIDLSAF 540 >gi|255970765|ref|ZP_05421351.1| tRNA-binding domain-containing protein [Enterococcus faecalis T1] gi|256962878|ref|ZP_05567049.1| hypothetical protein EFHG_02077 [Enterococcus faecalis HIP11704] gi|255961783|gb|EET94259.1| tRNA-binding domain-containing protein [Enterococcus faecalis T1] gi|256953374|gb|EEU70006.1| hypothetical protein EFHG_02077 [Enterococcus faecalis HIP11704] gi|323478971|gb|ADX78410.1| putative tRNA binding domain protein [Enterococcus faecalis 62] Length = 206 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSEILEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|315171065|gb|EFU15082.1| tRNA binding domain protein [Enterococcus faecalis TX1342] Length = 206 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P + +++ +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMP-DGLVIWPGVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|312901942|ref|ZP_07761205.1| tRNA binding domain protein [Enterococcus faecalis TX0470] gi|311291009|gb|EFQ69565.1| tRNA binding domain protein [Enterococcus faecalis TX0470] gi|315167142|gb|EFU11159.1| tRNA binding domain protein [Enterococcus faecalis TX1341] Length = 206 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIEKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVENG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|331265797|ref|YP_004325427.1| phenylalanly tRNA synthetase [Streptococcus oralis Uo5] gi|326682469|emb|CBZ00086.1| phenylalanly tRNA synthetase [Streptococcus oralis Uo5] Length = 208 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD +E++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVERLNQELQAEGFTEEIVNDKE--PKFVVGEIIEMVAHPDSDHLNICQVTVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|315149100|gb|EFT93116.1| tRNA binding domain protein [Enterococcus faecalis TX0012] Length = 226 Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 51/139 (36%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTEIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|148668019|gb|EDL00436.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_c [Mus musculus] Length = 522 Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 155 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 208 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 209 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 257 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 258 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 314 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 315 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 374 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 375 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 433 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 434 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 478 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 479 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 519 >gi|313638223|gb|EFS03467.1| phenylalanyl-tRNA synthetase beta chain [Listeria seeligeri FSL S4-171] Length = 145 Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 17/147 (11%) Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV------K 717 +GY G HP + L E Y+ I + + +KVV+ HP+ Sbjct: 9 IGYLGGLHPAVEASADLK------ETYVFEINVEEVLTASKEKVVY----HPIPRYPEMT 58 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RDLA +VD++ T++ +IK+ L+ D+ +FD+F+G+SLGE KKS+A + + Sbjct: 59 RDLALLVDKNTDHATILEVIKSHGGNLLVDIELFDIFEGESLGENKKSLAYTLTFLDSER 118 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T ++D++ +++VE + +K NA++R Sbjct: 119 TLVEEDVQKATNKVVEALQEKLNAIIR 145 >gi|270292210|ref|ZP_06198425.1| tRNA binding domain protein [Streptococcus sp. M143] gi|270279738|gb|EFA25580.1| tRNA binding domain protein [Streptococcus sp. M143] Length = 208 Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++ELP D VG Sbjct: 185 RGVIELPEDQVVG 197 >gi|296205707|ref|XP_002749877.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain [Callithrix jacchus] Length = 589 Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 162/411 (39%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT +V +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCEKQFTVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ EV+ ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEVLTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L + + +D+ + A VI Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLL----DRIMQLLDVPPGEDKAGYVIR----------A 537 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 S P+++ PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 538 SEGPAFF-PGRCAEIFARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|124027762|ref|YP_001013082.1| phenylalanyl-tRNA synthetase subunit beta [Hyperthermus butylicus DSM 5456] gi|123978456|gb|ABM80737.1| Phenylalanyl-tRNA synthetase beta chain [Hyperthermus butylicus DSM 5456] Length = 556 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 37/299 (12%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEK 456 +P + + V+R+ G+ + + + LE + F V+ G+Y +V VP +R D+ + Sbjct: 272 EPHRWRLRLATVERVIGLKLSANEVAQKLEAMRFGVVEVGGDY--VDVLVPRFRIDIMHE 329 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL EE+ G D +K E L + L ++ R +++LA +EV ++ + Sbjct: 330 VDLAEEVALAIGFDALKPEKPKLML---RGGLLPVRAWEREARKLLAGHGYVEVKTYTLV 386 Query: 517 SKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 S + GG ++ ++I NP+S + +R ++LP LL+ N R IFE+ Sbjct: 387 SCREQEAVGGIPAEKLVKIANPVSVEADCVRATMLPNLLRIAASNQHRI--PLRIFELGE 444 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 V E T EG + G+R G + + +DK+ D +V+ V Sbjct: 445 VVEV-TGEGDR----GVRYGR---KLAILYMADKA-----------GYEDIQAVVYSIVR 485 Query: 635 LDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 L + S + HP GR+ + KT + + GE P IL+ +G++ PI E+ Sbjct: 486 LTNDEI-SVIKEYTHPLLIQGRTALAKTKRGLRI-IIGEVRPEILERYGIAYPIAVAEI 542 >gi|227497655|ref|ZP_03927869.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] gi|226832885|gb|EEH65268.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] Length = 171 Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats. Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 12/168 (7%) Query: 648 YHPGRSGIIKTS-----AEIVLG----YFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 +HPGR+ I+ + E+V G + GE HP GL C E+ L+ + + Sbjct: 6 WHPGRTAQIRLALTRKGKELVPGAVVAHAGELHPRTAKELGLPARACAVEIDLEPL-LEA 64 Query: 699 KKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNV-DRLIDDVTVFDVFQGKS 757 + +V +S+ K D+A +VD+ + +G + +I+ L ++V +FDVF+G+ Sbjct: 65 AEAAGVLQVKAVSTFPAAKEDIALVVDEAVTSGEVEAVIREAAGELAEEVRLFDVFRGEQ 124 Query: 758 LGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLRSS 805 LG G+KS+A + ++ T ++ + R+V+ K+ A LRS+ Sbjct: 125 LGAGRKSLAFSLRLRG-DHTLTAEETASVRKRVVKRAAKRLGAQLRSA 171 >gi|74005579|ref|XP_864045.1| PREDICTED: similar to Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) isoform 3 [Canis familiaris] Length = 607 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 89/415 (21%), Positives = 164/415 (39%), Gaps = 56/415 (13%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ +I G H+ NT +V +E Sbjct: 222 VIYDSNGVVLSMPPVINGNHSKITVNTRNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 257 -GTDFTKAKIVLDVIVTMFSEYCENQFMVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T +++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRQDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL-FDAKADALSVI-EPFVSLDSLR 639 +++ A + G E L D+ + V F A ++ + V+ ++ Sbjct: 492 RNYRHLCAVYYNKNPGFEIIHGLL-DRIMQLLNVVSFVFQAAQNSFCEMNNNRVTKTNMY 550 Query: 640 FESGA--PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + S S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 551 YRSPVYNSSAFFPGRCAEILARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 604 >gi|255942585|ref|XP_002562061.1| Pc18g02170 [Penicillium chrysogenum Wisconsin 54-1255] gi|211586794|emb|CAP94441.1| Pc18g02170 [Penicillium chrysogenum Wisconsin 54-1255] Length = 593 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 130/596 (21%), Positives = 225/596 (37%), Gaps = 113/596 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + GIAL L + G L E ++ P E I ++ +D++ Sbjct: 54 PQLKIEIPANRYDLLCFEGIALMLNIFLGRNPLPEYKLTQPARMEQIIVK-----EDTTK 108 Query: 214 CKGFAMCCVK--------------GVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLD 259 + + + +++ + N RQR LV I + LD Sbjct: 109 IRPYVAGAILRNIKFDQARYASFIALQDKLHQNLARQR----------TLVSIGTH-DLD 157 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 ++A D+ L + GE+++ + L SP VI Sbjct: 158 TVKGPFTYEALPPKDIKFTPLNQTQEMDGEELMNFYEKHQQLGKYLHIIRDSPVYPVIYD 217 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II G + +TT+VL+E+ D + K + + S+Y E Sbjct: 218 SNRTVCSLPPIINGDRSKISLDTTNVLIEITALDKTKLDIVSK-MMVTMFSQYTLE---- 272 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 P V ++ T IA PR S + + G+ + + Sbjct: 273 -----PFTIEPVEIVSEHNNETRVTPDIA------PRTAEAEVSYINQCCGLSLSPAEIC 321 Query: 426 RILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--------- 473 +L+++ F D V +P R DV + D++E++ YG + + Sbjct: 322 TLLKKMAFRAKPSTTSPDIINVEIPPTRADVLHQCDIMEDVAIAYGFNSLPRAFPNISGT 381 Query: 474 -SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG------G 526 ++PLP+ ++ D V+ A EV+ S +++ FG Sbjct: 382 VAQPLPINKLSD------------IVRVETAMAGWSEVLPLILCSHDEN--FGWLNRKDD 427 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TP 581 G +++ NP + + +RTSLLPGLLK N ++ IFEVS V D Sbjct: 428 GNTAVKLANPKTLEFQVVRTSLLPGLLKTIRENKHHSVP-MKIFEVSDVAFKDLSLERKS 486 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ AA +SG E L R + + K D L+ E DS + Sbjct: 487 RNERHFAAAFYGKTSGFEVVHGLLD-------RVMAML--KTDFLAEGET-PKGDSYYIK 536 Query: 642 SGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y PG + I + V+G FG HP +L+ + L P+ E+ +++ Sbjct: 537 ELDDPTYFPGHAASIHVRIGGKDKVIGSFGILHPTVLEKYELKYPVSSLELNVEAF 592 >gi|213405295|ref|XP_002173419.1| phenylalanine-tRNA ligase beta subunit Frs1 [Schizosaccharomyces japonicus yFS275] gi|212001466|gb|EEB07126.1| phenylalanine-tRNA ligase beta subunit Frs1 [Schizosaccharomyces japonicus yFS275] Length = 589 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 94/408 (23%), Positives = 165/408 (40%), Gaps = 67/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV+ S R+ S+ II + +T DV +E D + + N + SRY E Sbjct: 209 VVLDSQRRVCSLPPIINSDLSKISLDTRDVFIECTATDKVKL-EIVLNTMVTMFSRY-CE 266 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 ++ + V +H S + T ++ ++NS + G+D+P Sbjct: 267 EPFSVEAVEIVSEH----------NDCSRVTPKLEPTLFKAEVAYLNS----VCGLDLPA 312 Query: 422 EDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS---- 474 + LER+ + + V VP+ R D+ + D++E++ YG D +K Sbjct: 313 NEVCEYLERMMLDAKPDPENSKLLNVYVPATRADILHQCDIMEDLAIAYGYDNLKHTYPG 372 Query: 475 ------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF---G 525 +P P+ Q+ D ++R +A EV+ ++ S +++ + Sbjct: 373 QSITHGQPYPINQLSD------------VIRREIALAGWSEVMPFTLCSHDENYAWLRKT 420 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPE-- 582 +E+ NP + + +R+SLLPG+LK N A+ IFEVS V + + T E Sbjct: 421 DDSLAIELGNPKTQEFQVVRSSLLPGILKTIRENRGHALP-IKIFEVSDVAFIDRTKESL 479 Query: 583 --GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS-LR 639 ++++ A +SG E L +D A + P L++ Sbjct: 480 TRNERHICAAYVGQTSGFELIHGL-----------LDRIMAMLHTRRITTPKTDLEAGFW 528 Query: 640 FESGAPSWYHPGRSGIIKTSAE-----IVLGYFGEFHPNILDFFGLSN 682 E Y PGR I E + +G FG HP +L+ F L++ Sbjct: 529 IEPVDDPTYFPGRCAAIYFRKESGKEGLRVGTFGVLHPLVLEKFQLAS 576 >gi|242398607|ref|YP_002994031.1| Phenylalanyl-tRNA synthetase beta chain [Thermococcus sibiricus MM 739] gi|259511903|sp|C6A237|SYFB_THESM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|242265000|gb|ACS89682.1| Phenylalanyl-tRNA synthetase beta chain [Thermococcus sibiricus MM 739] Length = 560 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 171/399 (42%), Gaps = 58/399 (14%) Query: 302 VVIASDGRIQSIAGIIGGK-HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +++ S+G + S+ +I + H + T + +++ W+ Sbjct: 202 LLVDSEGNVLSMPPVINSETHGKVTEETKSIFIDITGWN--------------------- 240 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-----PRKIVFMNSEVKRLS 415 L+ ++ L IV+ + G + I ++ K P++ + +KRL+ Sbjct: 241 -----LETIMLALNVIVTALAERGGKIRTVRVIYKDFELKTPDLTPKEFEVDLNYIKRLA 295 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++ +D +LER+ + V + ++ P++R D+ D++E++L YG + I+ E Sbjct: 296 GVELTDKDIKDLLERMMYEVDFVDRRVKLRYPAFRNDIMHPRDVLEDVLIAYGYNNIEPE 355 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEI 533 P V+ K + + ++ ++ + EV+ ++ ++E E +EI Sbjct: 356 E-PELAVQGKGDDFVDFENA--IRDLMVGFGLQEVMTFNLTNREAQFDKMNIPEEDIVEI 412 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NPIS S +R LLP L++ +N IFEV D K ++ Sbjct: 413 ENPISQKWSALRRWLLPSLMEFLSQNTHEEYPQ-RIFEVGKATLIDESRETKTIS----- 466 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR-FESGAPSWYHPGR 652 +L + + F +AK SV+ + ++R E G+ + PGR Sbjct: 467 -------ESKLVVAIAHPKVTFT---EAKEILDSVLRHLGAEYTIREIEYGS---FIPGR 513 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +G I + V G GE HP +L+ +G+ P+ FE++L Sbjct: 514 AGEIIVEGKKV-GIIGEIHPQVLENWGVEMPVAAFEIFL 551 >gi|74227024|dbj|BAE38313.1| unnamed protein product [Mus musculus] gi|116283395|gb|AAH02313.1| Farsb protein [Mus musculus] Length = 536 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 169 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 222 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 223 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 271 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 272 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 328 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 329 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 388 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 389 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 447 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 448 YYSKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 492 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 493 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 533 >gi|266625680|ref|ZP_06118615.1| phenylalanyl-tRNA synthetase beta chain [Clostridium hathewayi DSM 13479] gi|288862412|gb|EFC94710.1| phenylalanyl-tRNA synthetase beta chain [Clostridium hathewayi DSM 13479] Length = 251 Score = 70.1 bits (170), Expect = 1e-09, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 118/274 (43%), Gaps = 47/274 (17%) Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P+ D S MRTS L G+L + N +R + ++E++++Y P+ Sbjct: 1 PLGEDFSIMRTSPLHGMLSSLSTNYNRRNKNVRLYELANIY---LPKSLPL--------- 48 Query: 596 SGIEGSGRLWSDKSEERCRFV-------DLFDAKADALSVIEPFVSLDSLRFE-----SG 643 ++ +ER +F D +D K VIE F + + Sbjct: 49 ----------TELPDERMQFTLGMYGDGDFYDMKG----VIEEFFDKAGMHKKPHYNPDD 94 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI--PISQKKR 701 S+ HPGR I + +GY GE HP++ D + + G Y+ I P Sbjct: 95 KKSYLHPGRQADIVYDG-VTVGYLGEVHPDVADNYKI-----GERTYVAVIDMPSMIPFT 148 Query: 702 TKTKKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGE 760 T +K ++ V RD++ +V + + G + ++I+ +L++ +FD+++G + Sbjct: 149 TFDRKYTGIAKYPAVSRDISMVVPKDVLVGQIEDVIEQRGGKLLESYQLFDIYEGAQILA 208 Query: 761 GKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENV 794 G KSVA + + T D + +M++I+ + Sbjct: 209 GFKSVAYSITFRAKDHTLEDKEAGAVMNKILNGL 242 >gi|148668017|gb|EDL00434.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_b [Mus musculus] gi|148668018|gb|EDL00435.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_b [Mus musculus] Length = 564 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 197 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 250 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 251 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 299 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 300 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 356 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 357 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 416 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 417 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 475 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 476 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 520 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 521 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 561 >gi|2506749|sp|P47687|Y449_MYCGE RecName: Full=Uncharacterized protein MG449 Length = 228 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 11/130 (8%) Query: 43 PFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 PF + +V+SV + +++TG + + +VCGA NVRVG+ V G +P + Sbjct: 104 PFVVCEVVSVIPIANTHLKRCKVNTGLTKSLDIVCGANNVRVGMKTVLVQVGGVLPSGTV 163 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 I KI G +S GM+CSEKEL L + I+E+ VG P IDV L Sbjct: 164 IKKT-KIAGFDSVGMLCSEKELNLKQKNEGIIEINPKIKVG----------KPFIDVYLN 212 Query: 163 PNRSDCIGVR 172 S + + Sbjct: 213 KQHSKWVNTK 222 >gi|148668016|gb|EDL00433.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_a [Mus musculus] Length = 594 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 48/408 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 184 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 237 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 238 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 286 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 287 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 343 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 344 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 403 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 404 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 462 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 463 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 507 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 GR I + + G G HP+++ F L+ P E+ ++ + Q Sbjct: 508 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIEPFFVFQ 554 >gi|74005577|ref|XP_864028.1| PREDICTED: similar to Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) isoform 2 [Canis familiaris] Length = 491 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 157/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ +I G H+ NT +V +E Sbjct: 124 VIYDSNGVVLSMPPVINGNHSKITVNTRNVFIECT------------------------- 158 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 159 -GTDFTKAKIVLDVIVTMFSEYCENQFMVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 217 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 218 KKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 277 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T +++ +A+ E + ++ S+E L Sbjct: 278 NIQ---MTLPKTYTIANQFPLNKLTELLRQDMAAAGFTEALTFALCSQEDIADKLGLDIS 334 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 335 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 393 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L + + P + Sbjct: 394 RNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLN--------VPPGEKKGGYVIK 438 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 439 ASEGSAFFPGRCAEILARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 488 >gi|74005575|ref|XP_536085.2| PREDICTED: similar to Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) isoform 1 [Canis familiaris] Length = 589 Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 86/411 (20%), Positives = 157/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ +I G H+ NT +V +E Sbjct: 222 VIYDSNGVVLSMPPVINGNHSKITVNTRNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 257 -GTDFTKAKIVLDVIVTMFSEYCENQFMVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T +++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRQDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L + + P + Sbjct: 492 RNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLN--------VPPGEKKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 537 ASEGSAFFPGRCAEILARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|332203746|gb|EGJ17813.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA47368] Length = 116 Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/104 (35%), Positives = 64/104 (61%), Gaps = 1/104 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLVSYKWLKELVDIDVPSQELAEKMSTTGIEVESVESPAADLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I Sbjct: 61 LHVCQVNVGEEEARQIVCGAPNVRAGIKVMVALPGARIADNYKI 104 >gi|291392300|ref|XP_002712653.1| PREDICTED: phenylalanyl-tRNA synthetase, beta subunit [Oryctolagus cuniculus] Length = 748 Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G+H+ NT +V +E Sbjct: 381 VIYDSNGVVLSMPPIINGEHSKITVNTKNVFIECT------------------------- 415 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 416 -GTDFTKAKIVLDTIVTMFSEYCENQFTVEATEVVFPNRKSHTFPELAYRKEMVRADLIN 474 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ EV +P R D+ D+VE+ YG + Sbjct: 475 KKVGIRETPENLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADIIHACDIVEDAAIAYGYN 534 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 535 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDIS 591 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + DT Sbjct: 592 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDTTKDVGA 650 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L + + Sbjct: 651 KNYRHLCAVYYNKNPGFEIIHGLLD-------RVMQLLAVPSGE--------DKGGYVIK 695 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + A S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 696 ASAGSAFFPGRCAEIFARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 745 >gi|332366500|gb|EGJ44248.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus sanguinis SK1059] Length = 116 Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats. Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V + A LS + +V+S E PD Sbjct: 1 MLVSYKWLKELVDIDVASAELAEKMSTTGIEVEGVTSPAAGLSKIVVGEVVSCEDVPDTH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 + +++ G+ + Q+VCGAPNVR G+ + A PG+ I +N I Sbjct: 61 LHVCQVNVGEEENRQIVCGAPNVRAGIKVMVALPGARIADNYKI 104 >gi|293364154|ref|ZP_06610881.1| tRNA binding domain protein [Streptococcus oralis ATCC 35037] gi|307702491|ref|ZP_07639446.1| putative tRNA binding domain protein [Streptococcus oralis ATCC 35037] gi|291317332|gb|EFE57758.1| tRNA binding domain protein [Streptococcus oralis ATCC 35037] gi|307623985|gb|EFO02967.1| putative tRNA binding domain protein [Streptococcus oralis ATCC 35037] Length = 208 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFEEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|149711158|ref|XP_001495456.1| PREDICTED: phenylalanyl-tRNA synthetase, beta subunit [Equus caballus] Length = 589 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 85/411 (20%), Positives = 156/411 (37%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT +V +E Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITLNTRNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ +Y ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSYTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMCLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L D + P + Sbjct: 492 RNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEKKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + PGR + + + G G HP+++ F L+ P E+ ++ Sbjct: 537 ASEGPAFFPGRCAEVFARGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|12848723|dbj|BAB28064.1| unnamed protein product [Mus musculus] Length = 589 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 157/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICI------ARNITYKP---RKIVFMNSEVK 412 G D VL IV++ C + + ++ T+ RK + + Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEHCENQFTVEAVEVVSPNGKSSTFPELPCRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI + +IL R+ VIG+ ++ EV +P R DV D+VE+ YG + Sbjct: 316 KKVGIRETPANLAKILTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S V D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + A S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 537 ASAGSAFFPGRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|293383897|ref|ZP_06629799.1| tRNA binding domain protein [Enterococcus faecalis R712] gi|293388291|ref|ZP_06632805.1| tRNA binding domain protein [Enterococcus faecalis S613] gi|312906763|ref|ZP_07765763.1| tRNA binding domain protein [Enterococcus faecalis DAPTO 512] gi|312910700|ref|ZP_07769539.1| tRNA binding domain protein [Enterococcus faecalis DAPTO 516] gi|291078724|gb|EFE16088.1| tRNA binding domain protein [Enterococcus faecalis R712] gi|291082301|gb|EFE19264.1| tRNA binding domain protein [Enterococcus faecalis S613] gi|310627411|gb|EFQ10694.1| tRNA binding domain protein [Enterococcus faecalis DAPTO 512] gi|311288963|gb|EFQ67519.1| tRNA binding domain protein [Enterococcus faecalis DAPTO 516] Length = 226 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD ++K+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIKKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 205 AKKGILELPFDAEVGSAFA 223 >gi|260558466|ref|ZP_05830662.1| t-RNA-binding domain-containing protein [Enterococcus faecium C68] gi|260075640|gb|EEW63946.1| t-RNA-binding domain-containing protein [Enterococcus faecium C68] Length = 201 Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 4/92 (4%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D +I GK + +Q+VCGAPN+ G V A PG+ +P+ M++ +RG+E Sbjct: 106 HPDSDHLSITETQVGKEEVLQIVCGAPNIEAGQKVVVAKPGAMMPD-GMMIWPGTLRGVE 164 Query: 114 STGMMCSEKELMLSD--DSASIMELPIDAPVG 143 S GM+CS KEL L D I+ LP DA +G Sbjct: 165 SHGMICSAKELQLPDAPKEKGILVLPEDAVIG 196 >gi|239606761|gb|EEQ83748.1| phenylalanyl-tRNA synthetase beta subunit [Ajellomyces dermatitidis ER-3] Length = 600 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 131/596 (21%), Positives = 238/596 (39%), Gaps = 106/596 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINISC------P 194 P + + + NR D + + GIAL LV+ G+L+ I + P Sbjct: 54 PQLKIEVPANRYDLLCIEGIALMLNIFRERTPSPQYRLVSPPNGELETIVVKEETTKIRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I + FD + + F +++ + N RQR L A+G + L Sbjct: 114 YISGAILRNVHFD---QARYESFI-----ALQDKLHQNLARQRTLVAIGTHDLDKLKGPF 165 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVI 304 Y +L D S + L+ + +GE+++ ++ + SP VI Sbjct: 166 TYEALPPK------DISFVP--LSQTQKMNGEEMMEFYEKDKHIGKYLHIIRDSPVYPVI 217 Query: 305 ASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 R+ S+ II G H+ NT +V +E D + N+ + S++ E Sbjct: 218 YDSNRVVCSLPPIINGDHSKITLNTKNVFLEYTATDKTKV-EVVNNIMVTMFSQFTSE-- 274 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ T + PR S + + G+ + + Sbjct: 275 -------PFTVEPVRIVSEHNNETRQTPDLT------PRSAQASVSYINQCCGLSLSATE 321 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+R+ + D +V VP R DV +AD++E++ YG +++ Sbjct: 322 ICNLLKRMSYFAEPSKTSPDLIDVQVPVTRADVLHQADIMEDVAIAYGFNELPRSFPSKS 381 Query: 474 ---SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 382 GTVAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNT 432 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQ 584 +++ NP + + +RTSLLPGLLK N AI IFEVS V D + Sbjct: 433 AVKLANPKTIEFQVVRTSLLPGLLKTISENKHHAIP-MKIFEVSDVAFKDVSLERKSRNE 491 Query: 585 KYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---DLFD--AKADALSVIEPFVSLDSL 638 ++ AA +SG E G L + + F+ + D + +A IE L+ Sbjct: 492 RHFAAAWYGKNSGFEIVHGLLDRVMAMLKTAFIIGEEGLDNPSMGNAAYWIE---ELEDP 548 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + +G + H SG + ++G FG HP +L+ F L P+ E+ +++ Sbjct: 549 TYFTGHAASVHVSISG-----KDHIIGSFGILHPTVLEKFELKYPVSTLEINIEAF 599 >gi|302764670|ref|XP_002965756.1| hypothetical protein SELMODRAFT_143204 [Selaginella moellendorffii] gi|300166570|gb|EFJ33176.1| hypothetical protein SELMODRAFT_143204 [Selaginella moellendorffii] Length = 586 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 71/262 (27%), Positives = 115/262 (43%), Gaps = 44/262 (16%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY-- 497 DK +V +P R D+ D++E++ YG + I + P T E + QQ + Sbjct: 346 DKIQVFIPPTRSDILHPCDVMEDVAVAYGFNNI-PKTRPKTSTEGR-----QQPLNEFSD 399 Query: 498 -VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL----NPISADMSNMRTSLLPGL 552 ++ LA EV+NW +SK+++ + + +I NP S+D +RTSLLPG+ Sbjct: 400 LLRLELAMAGFSEVLNWVLVSKKENFTLLNRKDDEKIAAIVSNPRSSDFEVLRTSLLPGI 459 Query: 553 LKAT--GRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLW 605 LK ++V R + +FE+S V D + +++AA +SG E L Sbjct: 460 LKVMEHSKDVPRPV---KVFEISDVVLLDPSKDVGAANSRHLAALYCSTTSGFEIIHGLL 516 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLG 665 R +++ + D +V EP S P + GR I V G Sbjct: 517 D-------RIMNVLNVPVDGYTV-EP----------SNEPELFK-GRQAKIFYKGSCV-G 556 Query: 666 YFGEFHPNILDFFGLSNPICGF 687 FG HP +L F + +P C + Sbjct: 557 SFGIIHPQVLKNFDIPDP-CSY 577 >gi|222444484|ref|ZP_03606999.1| hypothetical protein METSMIALI_00095 [Methanobrevibacter smithii DSM 2375] gi|222434049|gb|EEE41214.1| hypothetical protein METSMIALI_00095 [Methanobrevibacter smithii DSM 2375] Length = 553 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 126/581 (21%), Positives = 239/581 (41%), Gaps = 103/581 (17%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA-----AGLGKLKEINISCPLSSESIP 201 SD + D I V PNR D + V G+A GL K + S ES+ Sbjct: 32 SDIEDFDDEEIKVEFFPNRPDNLSVEGVARSFKGFINQETGLPKYE-----VTPSDESVI 86 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGV-------------RNNVAPNWM--RQRLK-AVGLRS 245 ++ K + + A ++GV + N+ +W+ R R K A+G+ + Sbjct: 87 VDAKV----AKIRPYIAFAKIEGVDFTGDKLKYIMDFQENL--HWVIGRDRKKVAIGIHN 140 Query: 246 ISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG-EKILALDNQEYDLSPDNVVI 304 + NY++ + + F A +T + EK +A + D +++ Sbjct: 141 ADVVSQPFNYIATPKD--ENAFVALEKDTPMTPEEILTHHEKGVAYAHLLEDFDKYPLIL 198 Query: 305 ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP------INIARS--GKNLGIITDS 356 D ++ S+ II G+ D+N +++V+V D +NI S + G I Sbjct: 199 DKDNQVLSMPPIINGELTKIDENVKNIIVDVTGTDERAVNQCLNIICSSFAEVGGKIKSM 258 Query: 357 RYRFE-RGVDLQGMIPVLKHI-VSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++E + + + P +K++ V++ SL GGT Sbjct: 259 EVKYEDKSITTPDLTPQVKNVHVNVANSLIGGT--------------------------- 291 Query: 415 SGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 D+ ED ++L + F S I ++ +V +PS+R D+ + D+VE I Y ++ ++ Sbjct: 292 ---DLNAEDIQQLLSQARFDSEILNDNELKVYIPSYRIDILHEVDIVENIAVQYRINDVE 348 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-- 531 ++ ++ + + + +S R V L + +M ++ ++ E + Q+E+ Sbjct: 349 AKLPDISTIAYEHDWFRSESLMREVMIGLGFQEIMSLM----LTNEDAHFSKMKQKEIDH 404 Query: 532 -EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPEGQKYMAA 589 ++ PI+ D + +RTSL+ L++ N + IFE+ V Y ++T E Sbjct: 405 VQVARPITIDRTMIRTSLINSLMEFLEDNKHEDLPQ-KIFEIGDVLYMDETQE------- 456 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + + S +L F ++ L + + + +S PS+ Sbjct: 457 ------TKVRASKKLAGLICHSSANFTEIKSVVTSLLQNLGYSMEIS----DSNNPSFIA 506 Query: 650 PGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEV 689 S + TSA + G+FGEF P ++ F L P+ GFE+ Sbjct: 507 GRVSDVKGTSANGNISGFFGEFSPEVITNFTLDYPVIGFEI 547 >gi|119187713|ref|XP_001244463.1| hypothetical protein CIMG_03904 [Coccidioides immitis RS] Length = 600 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 94/413 (22%), Positives = 169/413 (40%), Gaps = 53/413 (12%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 ++ S + S+ II G H+ +T +V +E+ D + N+ + S+Y E Sbjct: 216 IIYDSKRTVCSLPPIINGDHSKITLDTRNVFMEITATDKTKV-EVVNNIMVAMFSQYTSE 274 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P + ++ T NI KPR S + + G+++ Sbjct: 275 ---------PFTIEPIQVVSEHNNETRQ----VPNI--KPRLTQASISYINQCCGLNLSA 319 Query: 422 EDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 ++ +L+++ + D +V VP R DV +AD++E++ YG +++ Sbjct: 320 QEICDLLKKMAYIAKPSKSSADLIDVEVPITRADVLHEADIMEDVAIAYGFNELPRSFPS 379 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 380 KSGTIAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----G 430 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PE 582 +++ NP + + +RTSLLPGLLK N + IFEVS V D Sbjct: 431 NTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKSHTVP-MRIFEVSDVAFKDMRLERKSR 489 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 +++ AA +SG E L D+ + F + L P VS E Sbjct: 490 NERHFAAAWYGRTSGFEVVHGLL-DRVMAMLK--SAFIVGEEGLD--NPDVSGSRYWIEE 544 Query: 643 GAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y PG + I E V+G FG HP +L+ F L P+ E+ ++ Sbjct: 545 LEDPTYFPGHAASIHVCIGGKEHVIGTFGILHPTVLEKFELKYPVSTLEMNIE 597 >gi|31981400|ref|NP_035941.2| phenylalanyl-tRNA synthetase beta chain [Mus musculus] gi|12845588|dbj|BAB26810.1| unnamed protein product [Mus musculus] gi|26337355|dbj|BAC32363.1| unnamed protein product [Mus musculus] Length = 589 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 275 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 276 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 324 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 325 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 382 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 441 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 442 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 500 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 501 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 545 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 546 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|261197467|ref|XP_002625136.1| phenylalanyl-tRNA synthetase beta subunit [Ajellomyces dermatitidis SLH14081] gi|239595766|gb|EEQ78347.1| phenylalanyl-tRNA synthetase beta subunit [Ajellomyces dermatitidis SLH14081] gi|327351226|gb|EGE80083.1| phenylalanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188] Length = 600 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 131/596 (21%), Positives = 238/596 (39%), Gaps = 106/596 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINISC------P 194 P + + + NR D + + GIAL LV+ G+L+ I + P Sbjct: 54 PQLKIEVPANRYDLLCIEGIALMLNIFRERTPSPQYRLVSPPNGELETIVVKEETTKIRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I + FD + + F +++ + N RQR L A+G + L Sbjct: 114 YISGAILRNVHFD---QARYESFI-----ALQDKLHQNLARQRTLVAIGTHDLDKLKGPF 165 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVI 304 Y +L D S + L+ + +GE+++ ++ + SP VI Sbjct: 166 TYEALPPK------DISFVP--LSQTQKMNGEEMMEFYEKDKHIGKYLHIIRDSPLYPVI 217 Query: 305 ASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 R+ S+ II G H+ NT +V +E D + N+ + S++ E Sbjct: 218 YDSNRVVCSLPPIINGDHSKITLNTKNVFLEYTATDKTKV-EVVNNIMVTMFSQFTSE-- 274 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ T + PR S + + G+ + + Sbjct: 275 -------PFTVEPVRIVSEHNNETRQTPDLT------PRSAQASVSYINQCCGLSLSATE 321 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+R+ + D +V VP R DV +AD++E++ YG +++ Sbjct: 322 ICNLLKRMSYFAEPSKTSPDLIDVQVPVTRADVLHQADIMEDVAIAYGFNELPRSFPSKS 381 Query: 474 ---SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 382 GTVAQPLPVNKLTDIIRTEAAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNT 432 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQ 584 +++ NP + + +RTSLLPGLLK N AI IFEVS V D + Sbjct: 433 AVKLANPKTIEFQVVRTSLLPGLLKTISENKHHAIP-MKIFEVSDVAFKDVSLERKSRNE 491 Query: 585 KYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---DLFD--AKADALSVIEPFVSLDSL 638 ++ AA +SG E G L + + F+ + D + +A IE L+ Sbjct: 492 RHFAAAWYGKNSGFEIVHGLLDRVMAMLKTAFIIGEEGLDNPSMGNATYWIE---ELEDP 548 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + +G + H SG + ++G FG HP +L+ F L P+ E+ +++ Sbjct: 549 TYFTGHAASVHVSISG-----KDHIIGSFGILHPTVLEKFELKYPVSTLEINIEAF 599 >gi|256960395|ref|ZP_05564566.1| hypothetical protein EFGG_02292 [Enterococcus faecalis Merz96] gi|257417887|ref|ZP_05594881.1| t-RNA-binding domain containing protein [Enterococcus faecalis T11] gi|256950891|gb|EEU67523.1| hypothetical protein EFGG_02292 [Enterococcus faecalis Merz96] gi|257159715|gb|EEU89675.1| t-RNA-binding domain containing protein [Enterococcus faecalis T11] Length = 206 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 10/139 (7%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD ++K+ + G +EK D + + F V S +++PD D +I + + Sbjct: 70 TDEQIKKVNTAIKDAGFSETLEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 125 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 126 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 184 Query: 131 A--SIMELPIDAPVGGRLS 147 A I+ELP DA VG + Sbjct: 185 AKKGILELPFDAEVGSAFA 203 >gi|169806634|ref|XP_001828061.1| phenylalanyl-tRNA synthetase beta chain [Enterocytozoon bieneusi H348] gi|263511567|sp|A9CS50|SYFB_ENTBH RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|161779189|gb|EDQ31213.1| phenylalanyl-tRNA synthetase beta chain [Enterocytozoon bieneusi H348] Length = 566 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/414 (21%), Positives = 183/414 (44%), Gaps = 70/414 (16%) Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGK------NLGII 353 + ++ D I S+ II + + + +TT++ +EV D + + K N GII Sbjct: 196 EGIIFEYDNHIISMPPIINSEFSKIEPSTTNIFIEVTGTDYNKVDQVLKLMLLNFNTGII 255 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 + E +D+ + V ++ T +IC +KI F+ Sbjct: 256 EQVEIQKENSIDITPVFNVTPYVF---------TIDEIC---------KKIGFLLQP--- 294 Query: 414 LSGIDVPIEDSLRI-LERLGFSVIGEYDKFEVSVPSW-RQDVEEKADLVEEILRIYGVDQ 471 D++++ LE++ ++V + D+ +++PS+ R D+ +K D++E+IL YG + Sbjct: 295 ---------DTIKLCLEKMQYAVEIKNDQL-IAIPSYNRLDIIDKCDIIEDILIGYGFEN 344 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM---EVVNWSFISKEQSVLFGGGQ 528 I PL + + + ++ ++ AMM E++ + ++K ++++ Sbjct: 345 I-----PLDNPIEFYTIGKENDLNKFSDKIREEMAMMGFNEMLTLTLLNKTENIM---HD 396 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +E+ P S + +RTSLLPGL K N + + +FE+S V D+ Y Sbjct: 397 YMVEVEYPKSKEYEVVRTSLLPGLFKTLSINQNVKLP-IQLFEISDVVLLDS-----YNK 450 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL----DSLRFESGA 644 + ++ +G+ ++ S E + LF L++I F ++ D++ + Sbjct: 451 SFNKRFLTGV--CAQMNSKLEEILEVIISLF----KKLNLIVEFTNIITDSDNIFLKEKW 504 Query: 645 PSWYHPGRSGIIKTSA----EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ++ I S+ ++G G HP I F +S PI FE+ L+ + Sbjct: 505 EKYFIKNQTASIYVSSYNIPRTLIGCLGVVHPTINMQFKISLPISAFEIDLEKV 558 >gi|302788142|ref|XP_002975840.1| hypothetical protein SELMODRAFT_175180 [Selaginella moellendorffii] gi|300156116|gb|EFJ22745.1| hypothetical protein SELMODRAFT_175180 [Selaginella moellendorffii] Length = 586 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 95/415 (22%), Positives = 165/415 (39%), Gaps = 79/415 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+ + S+ II G H+ NT +VL+E Sbjct: 224 VIYDSNRTVLSLPPIINGAHSAISLNTKNVLIECT------------------------- 258 Query: 362 RGVDLQGMIPVLKHIVSLILSLCG------GTASDICIARNITYKPRKIVFMN---SEVK 412 DL VL +V++ C + R Y + M+ S +K Sbjct: 259 -ATDLTKAKIVLNTMVAMFSGYCDEKFEVEPVDVVDPVGRVTRYPDLSLRTMDVDLSYIK 317 Query: 413 RLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G+ + + + +L ++ + + DK +VS+P R D+ D++E++ YG + Sbjct: 318 KSVGVPLQAGEIVDLLSKMQLTSKEIDGDKIQVSIPPTRSDILHPCDVMEDVAVAYGFNN 377 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 I + P T E + QQ + ++ LA EV+NW +SK+++ + Sbjct: 378 I-PKTRPKTSTEGR-----QQPLNEFSDLLRLELAMAGFSEVLNWVLVSKKENFTLLNRK 431 Query: 529 RELEIL----NPISADMSNMRTSLLPGLLKAT--GRNVDRAIADFAIFEVSHVYENDTPE 582 + +I NP S+D +RTSLLPG+LK ++V R + +FE+S V D + Sbjct: 432 DDDKIAAIVSNPRSSDFEVLRTSLLPGILKVMEHSKDVPRPV---KVFEISDVVLLDPSK 488 Query: 583 -----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +++AA +SG E L R +++ + D +V Sbjct: 489 DVGAANSRHLAALYCSTTSGFEIIHGLLD-------RIMNVLNVPVDGYTV--------- 532 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 S P + GR I V G FG HP +L F + +P E+ ++ Sbjct: 533 --GPSNEPELFK-GRQAKIFYKGSCV-GSFGIIHPQVLKNFDIPDPCSYIEMEIE 583 >gi|300711555|ref|YP_003737369.1| phenylalanyl-tRNA synthetase subunit beta [Halalkalicoccus jeotgali B3] gi|299125238|gb|ADJ15577.1| phenylalanyl-tRNA synthetase subunit beta [Halalkalicoccus jeotgali B3] Length = 567 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 95/379 (25%), Positives = 151/379 (39%), Gaps = 63/379 (16%) Query: 346 SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTASDICIAR------NI 397 +G+ + TDSR F G D Q I + IV LS G T ++ + Sbjct: 221 NGRRTEVTTDSRELFVELTGTD-QWTIDKMCAIVCYALSARGATIEEVEVEYPDATLLRP 279 Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFS---VIGEYDKFEVSVPSWRQDVE 454 ++ RK + ++ + G+ E + ER G S V+GE ++V +P +R DV Sbjct: 280 DFEVRKKRVSHDRIEGMLGMAFEPETVIDCFERAGLSATQVLGEESAYDVEIPPYRVDVL 339 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVV 511 DL++++ R YG D + + D + + RTR + VL + + Sbjct: 340 HPVDLIDDVGRAYGFDAL------IPTYPDVGTVGGRHERTRLEDATRNVLCGLGFEDTL 393 Query: 512 NWSFISKEQSV----------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 N+ I++ ++ + G G+ I P S D + +RT LP LL N Sbjct: 394 NFHLINEAENYDRLRVEPGNEVLGAGEAAT-IREPYSEDYTMVRTWALPSLLILLENNTH 452 Query: 562 RAIA-DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFD 620 R+ D A EV E D R+ +G+ +D S E D Sbjct: 453 RSYPQDLA--EVGFAAELD---ASTETGVAERRTVAGVLAR----TDASYE--------D 495 Query: 621 AKADALSVIEPF-VSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNIL 675 AK ++ F V L++ P HP GR+ ++ V G GE HP +L Sbjct: 496 AKGRLQAIARAFDVDLET-------PPTTHPTFIDGRTATVEIDGHSV-GVVGEIHPEVL 547 Query: 676 DFFGLSNPICGFEVYLDSI 694 L P+ FE LD++ Sbjct: 548 VEHDLELPVAAFEFRLDAL 566 >gi|213618535|ref|ZP_03372361.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] Length = 210 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 VD +D K D +V++ L ++F++ HPG+S I E + G+ G HP + Sbjct: 27 VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERI-GFIGVVHPELE 85 Query: 676 DFFGLSNPICGFEVYLDSIP---ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 L+ FE+ + + + Q + +S +RD+A +V +++PA Sbjct: 86 RKLDLNGRTLVFELEWNKLADRIVPQAR--------EISRFPANRRDIAVVVAENVPAAD 137 Query: 733 LVNIIKNVDRLIDDVT-VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +++ K V +FDV++GK + EG KS+AI +++Q T +++I + + V Sbjct: 138 ILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCV 197 Query: 792 ENVVKKTNAVLR 803 E + ++ A LR Sbjct: 198 EALKERFQASLR 209 >gi|229543489|ref|ZP_04432549.1| t-RNA-binding domain protein [Bacillus coagulans 36D1] gi|229327909|gb|EEN93584.1| t-RNA-binding domain protein [Bacillus coagulans 36D1] Length = 201 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 7/117 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ L+K+ L G + EK+D LSP F + V E++PD D +I ++DTG + Sbjct: 66 TEALLDKLNGILAENGFD-EKLDAD--LSPKFVVGYVKEKEKHPDSDHLSICQVDTGA-E 121 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+VCGAPNV G V A G+ +P N MI+ +RG+ S+GM+CS +EL L + Sbjct: 122 TLQIVCGAPNVEAGQKVVVAKTGAVMP-NGMIIKDAVLRGVASSGMICSARELGLPN 177 >gi|12644592|sp|Q9WUA2|SYFB_MOUSE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|4633656|gb|AAD26855.1|AF123263_1 phenylalanyl tRNA synthetase beta subunit [Mus musculus] gi|16741161|gb|AAH16428.1| Phenylalanyl-tRNA synthetase, beta subunit [Mus musculus] Length = 589 Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 275 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 276 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 324 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 325 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 382 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 441 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 442 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 500 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 501 YYSKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 545 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 546 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|74223199|dbj|BAE40736.1| unnamed protein product [Mus musculus] Length = 588 Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 221 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 274 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 275 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 323 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 324 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 380 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 381 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 440 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 441 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 499 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 500 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 544 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 545 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 585 >gi|15921704|ref|NP_377373.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus tokodaii str. 7] gi|24418717|sp|Q971D8|SYFB_SULTO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15622491|dbj|BAB66482.1| 540aa long hypothetical phenylalanyl-tRNA synthetase beta subunit [Sulfolobus tokodaii str. 7] Length = 540 Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 88/402 (21%), Positives = 159/402 (39%), Gaps = 69/402 (17%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG+I S+ +I + + T + ++V Sbjct: 194 IMQDDGQILSLPPVINSEKTRINSKTQSLFIDVT-------------------------- 227 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP----RKIVFMNSEVKRLSGID 418 G L +I L IV+ + + G I+ + P + I + ++ G + Sbjct: 228 GTSLDTVIFTLDVIVTNLAEMGGKIGRIKVISPYVDNSPLLQHKSIKITAEYINKILGTN 287 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + + + L+ F V + EV +P +R D+ + D+ EE+ YG + + P Sbjct: 288 LNKNEIIEYLKMARFDVNDLGKEIEVIIPPYRNDILSQIDITEEVAITYGYNNLSPTPY- 346 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 ++E +LS + R ++ + E+ ++ IS +S+L G ++ILNPI+ Sbjct: 347 --KIEKIGSLSDRTKLIRVLRDLSVGGGFTEIFTFTLIS--ESLLLGDF---VKILNPIT 399 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 D +++R SLLP +L +N A +FE+ V IR ++ Sbjct: 400 VDYNSVRNSLLPSILIFLSKN-QHARMPIRVFEIGDVV--------------IRNENTET 444 Query: 599 EGSGRLWSDKS--EERCRFVDLFDAKADALSV--IEPFVSLDS--LRFESGAPSWYHPGR 652 S +L + + R F +L + L+ I P D+ L E S Y + Sbjct: 445 GYSNKLNAAYAIMNSRVSFEELQAPLHEILNSLGINPIYKRDTNPLFIEGRTASIYANNK 504 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +G GE +PNIL+ + PI E+YLD I Sbjct: 505 K----------IGIIGEINPNILEKIDIEYPIVMSEIYLDEI 536 >gi|303290484|ref|XP_003064529.1| predicted protein [Micromonas pusilla CCMP1545] gi|226454127|gb|EEH51434.1| predicted protein [Micromonas pusilla CCMP1545] Length = 595 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 93/403 (23%), Positives = 161/403 (39%), Gaps = 46/403 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ +D + S+ II G + +T DV +E D +N A+ N + S + Sbjct: 219 VIYDADRTVLSLPPIINGAKSAITLDTRDVFIECTATD-LNKAKIVLNTVVAMFSEH--- 274 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P V ++ +L + R + P+ ++N + G+D+ Sbjct: 275 ------SSTPFAVEPVDVVDALGSEKTYPDFMTRFVEVDPK---YVNQRI----GVDIDA 321 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + +L R+ + V + + V VP R DV D+ E++ YG + IK + Sbjct: 322 KTMAALLCRMQLATKVSDDGETLRVEVPPTRSDVLHPCDIAEDVAIAYGYNNIKRTIPKM 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE------I 533 V ++ L+ + ++ +A+ E + W S + + + RE + + Sbjct: 382 ATVGAQQPLN---HFSDLIRNEVAAMGFSEALTWILCSHDDN--YANVMREDDGKSGAIV 436 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP S D+ +R+SLLPG+LKA G N D + +FEV V D E Sbjct: 437 ANPSSTDVQVVRSSLLPGVLKAMGANKDAPLPA-KLFEVGDVVLLDDSE----------- 484 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--ESGAPSWYHPG 651 G S RL S + F + L + S+D + + + Y PG Sbjct: 485 -DVGARNSRRLLVLYSNAKAGFEVVHGVLDRVLLIAGASRSVDQPGYSVKESDEATYFPG 543 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 R + + V G FG HP++L F + NP E+ L+ + Sbjct: 544 RQAKVVVGGKEV-GIFGIVHPDVLSKFDIVNPCSVLELDLEPL 585 >gi|90084589|dbj|BAE91136.1| unnamed protein product [Macaca fascicularis] Length = 589 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/408 (21%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ +Y ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSYTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRYDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|115389476|ref|XP_001212243.1| phenylalanyl-tRNA synthetase beta chain [Aspergillus terreus NIH2624] gi|114194639|gb|EAU36339.1| phenylalanyl-tRNA synthetase beta chain [Aspergillus terreus NIH2624] Length = 600 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 126/598 (21%), Positives = 233/598 (38%), Gaps = 110/598 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GIAL LV G+L++I + P Sbjct: 54 PQLKIEIPANRYDMLCFEGIALMLNIFLGRRPLPNYRLVEPANGQLEKIIVKEDTMKIRP 113 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 L S +I +KFD + + F +++ + N RQR L ++G + + Sbjct: 114 LVSGAILRNVKFD---QARYESFI-----ALQDKLHQNLARQRTLVSIGTHDLDTIKGPF 165 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVI 304 Y +L P + ++ + +GE+++ ++ L SP VI Sbjct: 166 TYEAL----PPKDIKFTPLNQT----KEMNGEELMNFYEKDKHLGKYLHIIRDSPVYPVI 217 Query: 305 ASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 R+ S+ II G H+ +T +V +E+ D + + + + S Y E Sbjct: 218 YDANRVVCSLPPIINGNHSKITLDTKNVFIEITALDKTKVEIVNR-MMVAMFSEYCSE-- 274 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V ++ ++ + +++ PR S + + G+D+ Sbjct: 275 -------PFTIEPVQIV----SDHNNETRVVPDMS--PRTTQAEISYLNQCCGLDLSATQ 321 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+++ ++ D +V +P R DV +AD++E++ YG + + Sbjct: 322 ICDLLKKMAYNAKPSASSPDLIDVDIPPTRADVLHQADIMEDVAIAYGFNNLPRSFPSKS 381 Query: 474 ---SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG----- 525 ++PLP+ ++ D V+ A EV+ S +++ FG Sbjct: 382 GTIAQPLPINKLSD------------IVRMEAAMAGWSEVLPLILCSHDEN--FGWLNRK 427 Query: 526 -GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND----- 579 G +++ NP + + +RTSLLPGLLK N + IFEVS V D Sbjct: 428 DDGNTAVKLSNPKTLEFQVVRTSLLPGLLKTIRENKHHTVP-MKIFEVSDVAFKDLSLER 486 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 +++ AA +SG E L D++ + F + L P V Sbjct: 487 KSRNERHFAAAWYGKTSGFEVVHGLL-DRTMAMLK--SAFITTEEGLE--NPAVGESHYW 541 Query: 640 FESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E + Y PG + + + V+G FG HP +L+ + L P+ E+ +++ Sbjct: 542 IEELDDATYFPGHAASVHLRIGGKDHVIGSFGILHPTVLENYELKYPVSTLEINIEAF 599 >gi|221232644|ref|YP_002511798.1| tRNA-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225855410|ref|YP_002736922.1| putative tRNA binding domain protein [Streptococcus pneumoniae JJA] gi|220675106|emb|CAR69687.1| putative tRNA-binding protein [Streptococcus pneumoniae ATCC 700669] gi|225722495|gb|ACO18348.1| putative tRNA binding domain protein [Streptococcus pneumoniae JJA] Length = 208 Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKEP--KFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|149016224|gb|EDL75470.1| phenylalanine-tRNA synthetase-like, beta subunit [Rattus norvegicus] Length = 492 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 156/411 (37%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 123 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECT------------------------- 157 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG-----TASDICIARNITYKP----RKIVFMNSEVK 412 G DL VL IV++ C A + + + P RK + + Sbjct: 158 -GTDLTKAKIVLDIIVTMFSEYCENQFTVEAAEVVSPSGKSSTLPELPYRKEMVRADLIN 216 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + Sbjct: 217 KKVGIKETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYN 276 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 277 NIQ---MTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLNIS 333 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D Sbjct: 334 ATKAVHIGNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVQDPSKDVGA 392 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 393 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYVIK 437 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + A S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 438 ASAGSAFFPGRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 487 >gi|74204390|dbj|BAE39948.1| unnamed protein product [Mus musculus] Length = 589 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 275 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 276 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 324 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 325 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIRACDIVEDAAIAYGYNNIQ---MTL 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 382 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 441 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 442 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 500 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 501 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 545 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 546 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|281351677|gb|EFB27261.1| hypothetical protein PANDA_021194 [Ailuropoda melanoleuca] Length = 551 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 157/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G I S+ +I G H+ NT +V +E Sbjct: 184 VIYDSNGVILSMPPVINGSHSKITVNTRNVFIECT------------------------- 218 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 219 -GTDFTKAKIVLDVIVTMFSEYCENQFTVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 277 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 278 KKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRSDIIHACDIVEDAAIAYGYN 337 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ LP T L L + T ++ +A+ E + ++ S+E L Sbjct: 338 NIQMT-LPKT-CTIANQLPLNK-LTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDIS 394 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 395 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 453 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L + + P + Sbjct: 454 RNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLN--------VPPGEKKGGYVIK 498 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + PGR I + V G G HP+++ F L+ P E+ ++ Sbjct: 499 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEINIE 548 >gi|281490932|ref|YP_003352912.1| tRNA binding domain protein [Lactococcus lactis subsp. lactis KF147] gi|281374690|gb|ADA64210.1| tRNA binding domain protein [Lactococcus lactis subsp. lactis KF147] Length = 208 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 9/149 (6%) Query: 3 FTLSWLKDHLDTDVSLEKICDTLTSIGLEVEK-----VDNREALSPFTIVKVLSVERNPD 57 F L +L D + D + ++ E+EK V +A F + +++ +E +PD Sbjct: 50 FEAKSLLANLSGDGQVNLSSDDIETLNKELEKSGFSDVLVHDAQPKFVVAEIVEMEDHPD 109 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 D I +++ G +Q+VCGAPN +GL V A PG+ +P ++I +RGI+S G Sbjct: 110 SDHLHICKVNVGFADPVQIVCGAPNAALGLKTVAALPGAMMPNGSLIFP-GALRGIQSYG 168 Query: 117 MMCSEKELMLSD--DSASIMELPIDAPVG 143 M+CS +EL L + + I+EL D G Sbjct: 169 MLCSARELELPNAPEVRGIIELSSDLSAG 197 >gi|125623274|ref|YP_001031757.1| phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|124492082|emb|CAL97011.1| Phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris MG1363] gi|300070024|gb|ADJ59424.1| phenylalanyl-tRNA synthetase beta chain [Lactococcus lactis subsp. cremoris NZ9000] Length = 208 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ +E +PD D I +++ G +Q+VCGAPN +GL V A PG+ +P N Sbjct: 96 FVVAEIVEMEDHPDSDHLHICKVNVGFADPVQIVCGAPNASLGLKTVAALPGAMMP-NGA 154 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMEL 136 ++ +RG++S GM+CS +EL L D D I+EL Sbjct: 155 LIFPGALRGVQSYGMLCSARELELPDAPDVRGIIEL 190 >gi|145355710|ref|XP_001422094.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582334|gb|ABP00411.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 599 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 101/412 (24%), Positives = 163/412 (39%), Gaps = 63/412 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV S+G + S+ II G + +TTDV +E D +N A+ N + S Y E Sbjct: 228 VVKDSEGTVLSLPPIINGAKSAISLDTTDVFIECTATD-LNKAKIVLNTMVTMFSEYCAE 286 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV----KRL-SG 416 P V ++ C + TY F++++V KR+ + Sbjct: 287 ---------PFTVEPVDVV----------DCTGKETTYPDFMTRFVDADVDYINKRIGTS 327 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ID +L +L + + V VP R D+ D+ E++ +G + I Sbjct: 328 IDRQTMAALLCRMQLPTKLGADETTLRVEVPPTRSDILHPCDIAEDVAIAHGYNNIAR-- 385 Query: 477 LPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE- 532 V + ++ QQ ++ V+ +A EV+ W S + + F RE + Sbjct: 386 ----TVPNTYTIASQQPINKFSDAVRGEVARSGFSEVLTWILCSHDDN--FANVLREDDG 439 Query: 533 -----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + NP S D+ R SLLPG LKA G N D + +FEV V D PE Sbjct: 440 NSAAIVANPSSLDVQVARNSLLPGALKALGANKDAPLPA-KLFEVGDVVVLD-PEAD--- 494 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-----ES 642 G S RL S + F ++ D + + D F ES Sbjct: 495 --------VGARNSRRLLVLYSNVQSGF-EVVQGVLDRVMQVVGIAKFDGSDFGYQLQES 545 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 P+++ PGR + + + + G FG HP++ F + +P E+ L+ + Sbjct: 546 NEPTYF-PGRQARVMRNGKKI-GVFGIVHPDVCAKFDIVSPTSVLELELEPL 595 >gi|322387190|ref|ZP_08060800.1| tRNA binding domain protein [Streptococcus infantis ATCC 700779] gi|321141719|gb|EFX37214.1| tRNA binding domain protein [Streptococcus infantis ATCC 700779] Length = 216 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E ++++E F + +++ + +PD D I ++ G + Sbjct: 68 TDDQVARLNQELQAQGFSEEIINDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVGNDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|14521584|ref|NP_127060.1| phenylalanyl-tRNA synthetase subunit beta [Pyrococcus abyssi GE5] gi|12644591|sp|Q9UYX2|SYFB_PYRAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|5458803|emb|CAB50290.1| pheT phenylalanyl-tRNA synthetase, subunit beta [Pyrococcus abyssi GE5] Length = 556 Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 78/336 (23%), Positives = 149/336 (44%), Gaps = 29/336 (8%) Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNIT-----YKPRKIVFMNSEVKRLSGI 417 G DL+ ++ L +V+ + G S I ++ P++ + +++LSG+ Sbjct: 237 GWDLKKVMLALNVMVTALAERGGKIRSVKVIYKDFEIVTPDLTPKRFEVELNYIRKLSGL 296 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ E+ +LER+ +SV E K ++ P++R D+ D++E++L YG + I+ E Sbjct: 297 DLKDEEIKELLERMMYSVELEDGKAKLLYPAFRDDIMHARDVLEDVLIAYGYNNIEPEE- 355 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQREL-EILN 535 P V+ + + + ++ ++ + E++ ++ +KE Q + E+ EI N Sbjct: 356 PKLAVQGRGDPF--KDFEDAIRDLMVGFGLQEIMTFNLTNKEVQFKKMNIPEEEIVEIAN 413 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P+S S +R LLP L++ N IFEV D K ++ K + Sbjct: 414 PVSQRWSALRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLATLIDESRETKTISEP--KLA 470 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + GS +++ E + D+ L V E + GR G Sbjct: 471 VALAGSEYTFTNAKE-------ILDSLMRHLGV--------EYEIEETEHGSFISGRVGK 515 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + + + V G GE HP +L+ + + P+ FE++L Sbjct: 516 VLVNGKEV-GIIGEIHPQVLENWNIEVPVVAFEIFL 550 >gi|150399321|ref|YP_001323088.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus vannielii SB] gi|166227810|sp|A6UPQ4|SYFB_METVS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|150012024|gb|ABR54476.1| phenylalanyl-tRNA synthetase, beta subunit [Methanococcus vannielii SB] Length = 554 Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 61/300 (20%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++ + + L++ V E +K V +P++R D+ DL EE+ + +G ++ + + Sbjct: 293 GLELNAGEIISALKKARMDVKFENEKLMVKIPAYRNDILHNVDLKEEVAKNHGYEKFEGK 352 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK----EQSVLFGGGQREL 531 LP RN + + ++ + + EV+N + ++ E+ L + + Sbjct: 353 -LPSIATTGSRNPI--EKKCKHYQNTMLGFGFFEVMNLTLSNQETLFEKMNLKYSEKDYV 409 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH---VYENDTPEGQKYMA 588 E+L P S + +RTS+LP LL+ N + IFE+ + ENDT Sbjct: 410 EVLKPASIEHRVLRTSILPMLLETLFINKHNVLPQ-KIFEIGDCVLIDENDT-------- 460 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF-------- 640 K++ +C+ + K + +V+ P + + ++ Sbjct: 461 -------------------KTDTKCK-----NIKKISCAVVHPLTNFNEIKTVTEGLLRE 496 Query: 641 ---ESGAPSWYHP----GR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E ++ HP GR + I+ EI G+FGE HP ++ F L +PI FE+ ++ Sbjct: 497 TFGEFEIENYEHPSFISGRCAKILNNGKEI--GFFGEIHPEVILNFELEHPIVAFEILIE 554 >gi|322391425|ref|ZP_08064894.1| tRNA binding domain protein [Streptococcus peroris ATCC 700780] gi|321145508|gb|EFX40900.1| tRNA binding domain protein [Streptococcus peroris ATCC 700780] Length = 216 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E ++++E F + +++ + +PD D I ++ G + Sbjct: 68 TDEQVARLNQELQAQGFTEEIINDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVGNDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSDDQVVG 197 >gi|261350970|ref|ZP_05976387.1| phenylalanyl-tRNA synthetase, beta subunit [Methanobrevibacter smithii DSM 2374] gi|288860310|gb|EFC92608.1| phenylalanyl-tRNA synthetase, beta subunit [Methanobrevibacter smithii DSM 2374] Length = 553 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 126/581 (21%), Positives = 238/581 (40%), Gaps = 103/581 (17%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA-----AGLGKLKEINISCPLSSESIP 201 SD + D I V PNR D + V G+A GL K + S ES+ Sbjct: 32 SDIEDFDDEEIKVEFFPNRPDNLSVEGVARSFKGFINQETGLPKYE-----VTPSDESVI 86 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGV-------------RNNVAPNWM--RQRLK-AVGLRS 245 ++ K + + A ++GV + N+ +W+ R R K A+G+ + Sbjct: 87 VDAKV----AKIRPYIAFAKIEGVDFTGDKLKYIMDFQENL--HWVIGRDRKKVAIGIHN 140 Query: 246 ISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG-EKILALDNQEYDLSPDNVVI 304 + NY++ + + F A +T + EK +A + D +++ Sbjct: 141 ADVVSQPFNYIATPKD--ENAFVALEKDTPMTPEEILTHHEKGVAYAHLLEDFDKYPLIL 198 Query: 305 ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP------INIARS--GKNLGIITDS 356 D ++ S+ II G+ D+N +++V+V D +NI S + G I Sbjct: 199 DKDNQVLSMPPIINGELTKIDENVKNIIVDVTGTDERAVNQCLNIICSSFAEVGGKIKSM 258 Query: 357 RYRFE-RGVDLQGMIPVLKHI-VSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++E + + + P +K++ V + SL GGT Sbjct: 259 EVKYEDKSITTPDLTPQVKNVHVDVANSLIGGT--------------------------- 291 Query: 415 SGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 D+ ED ++L + F S I ++ +V +PS+R D+ + D+VE I Y ++ ++ Sbjct: 292 ---DLNAEDIQQLLSQARFDSEILNDNELKVYIPSYRIDILHEVDVVENIAVQYRINDVE 348 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-- 531 ++ ++ + + + +S R V L + +M ++ ++ E + Q+E+ Sbjct: 349 AKLPDISTIAYEHDWFRSESLMREVMIGLGFQEIMSLM----LTNEDAHFSKMKQKEIDH 404 Query: 532 -EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPEGQKYMAA 589 ++ PI+ D + +RTSL+ L++ N + IFE+ V Y ++T E Sbjct: 405 VQVARPITIDRTMIRTSLINSLMEFLEDNKHEDLPQ-KIFEIGDVLYMDETQE------- 456 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + + S +L F ++ L + + + +S PS+ Sbjct: 457 ------TKVRASKKLAGLICHSSANFTEIKSVVTSLLQNLGYSMEIS----DSNNPSFIA 506 Query: 650 PGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEV 689 S + TSA + G+FGEF P ++ F L P+ GFE+ Sbjct: 507 GRVSDVKGTSANGNISGFFGEFSPEVITNFTLDYPVIGFEI 547 >gi|297669559|ref|XP_002812960.1| PREDICTED: LOW QUALITY PROTEIN: phenylalanyl-tRNA synthetase beta chain-like [Pongo abelii] Length = 655 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 86/408 (21%), Positives = 160/408 (39%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 288 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 322 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 323 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 381 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 382 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 441 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 442 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 498 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 499 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 557 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L + + +D+ + VI+ Sbjct: 558 KNYRHLCAVYYNKNPGFEIIHGLL----DRIMQLLDVLPGEDKGGYVIK----------A 603 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 S P+++ PGR I + V G G HP+++ F L+ P E+ Sbjct: 604 SEGPAFF-PGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 649 >gi|148642337|ref|YP_001272850.1| phenylalanyl-tRNA synthetase subunit beta [Methanobrevibacter smithii ATCC 35061] gi|148551354|gb|ABQ86482.1| phenylalanyl-tRNA synthetase, beta subunit, PheT [Methanobrevibacter smithii ATCC 35061] Length = 553 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 126/581 (21%), Positives = 238/581 (40%), Gaps = 103/581 (17%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA-----AGLGKLKEINISCPLSSESIP 201 SD + D I V PNR D + V G+A GL K + S ES+ Sbjct: 32 SDIEDFDDEEIKVEFFPNRPDNLSVEGVARSFKGFINQETGLPKYE-----VTPSDESVI 86 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGV-------------RNNVAPNWM--RQRLK-AVGLRS 245 ++ K + + A ++GV + N+ +W+ R R K A+G+ + Sbjct: 87 VDAKV----AKIRPYIAFAKIEGVDFTGDKLKYIMDFQENL--HWVIGRDRKKVAIGIHN 140 Query: 246 ISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS-GEKILALDNQEYDLSPDNVVI 304 + NY++ + + F A +T + EK +A + D +++ Sbjct: 141 ADVVSQPFNYIATPKD--ENAFVALEKDTPMTPEEILTQHEKGVAYAHLLEDFDKYPLIL 198 Query: 305 ASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDP------INIARS--GKNLGIITDS 356 D ++ S+ II G+ D+N +++V+V D +NI S + G I Sbjct: 199 DKDNQVLSMPPIINGELTKIDENVKNIIVDVTGTDERAVNQCLNIICSSFAEVGGKIKSM 258 Query: 357 RYRFE-RGVDLQGMIPVLKHI-VSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 ++E + + + P +K++ V + SL GGT Sbjct: 259 EVKYEDKSITTPDLTPQVKNVHVDVANSLIGGT--------------------------- 291 Query: 415 SGIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 D+ ED ++L + F S I ++ +V +PS+R D+ + D+VE I Y ++ ++ Sbjct: 292 ---DLNAEDIQQLLSQARFDSEILNDNELKVYIPSYRIDILHEVDVVENIAVQYRINDVE 348 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL-- 531 ++ ++ + + + +S R V L + +M ++ ++ E + Q+E+ Sbjct: 349 AKLPDISTIAYEHDWFRSESLMREVMIGLGFQEIMSLM----LTNEDAHFSKMKQKEIDH 404 Query: 532 -EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPEGQKYMAA 589 ++ PI+ D + +RTSL+ L++ N + IFE+ V Y ++T E Sbjct: 405 VQVARPITIDRTMIRTSLINSLMEFLEDNKHEDLPQ-KIFEIGDVLYMDETQE------- 456 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 + + S +L F ++ L + + + +S PS+ Sbjct: 457 ------TKVRASKKLAGLICHSSANFTEIKSVVTSLLQNLGYSMEIS----DSNNPSFIA 506 Query: 650 PGRSGIIKTSAE-IVLGYFGEFHPNILDFFGLSNPICGFEV 689 S + TSA + G+FGEF P ++ F L P+ GFE+ Sbjct: 507 GRVSDVKGTSANGNISGFFGEFSPEVITNFTLDYPVIGFEI 547 >gi|50365406|ref|YP_053831.1| phenylalanyl-tRNA synthetase, beta subunit [Mesoplasma florum L1] gi|50363962|gb|AAT75947.1| similar to phenylalanyl-tRNA synthetase, beta subunit [Mesoplasma florum L1] Length = 193 Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats. Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 5/117 (4%) Query: 23 DTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNV 82 D LT I E++ V E L F I K++ + PD + +D K + +++VCGA N Sbjct: 65 DILTYINSELKDVIKLEPLEQFVIGKIIKCDAIPDTHLSACEVDI-KTKILKIVCGAKNA 123 Query: 83 RVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD---DSASIMEL 136 R G+ V A GS +P N M + K+RG +S GM+CS KEL + + +S I+EL Sbjct: 124 REGIFVVVATDGSWMP-NGMQIQKGKLRGYDSEGMLCSAKELNIEEGKFNSEGIIEL 179 >gi|51948478|ref|NP_001004252.1| phenylalanyl-tRNA synthetase beta chain [Rattus norvegicus] gi|51260793|gb|AAH79364.1| Phenylalanyl-tRNA synthetase, beta subunit [Rattus norvegicus] Length = 589 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 156/411 (37%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG-----TASDICIARNITYKP----RKIVFMNSEVK 412 G DL VL IV++ C A + + + P RK + + Sbjct: 257 -GTDLTKAKIVLDIIVTMFSEYCENQFTVEAAEVVSPSGKSSTLPELPYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + Sbjct: 316 KKVGIKETPANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLNIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D Sbjct: 433 ATKAVHIGNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVQDPSKDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + A S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 537 ASAGSAFFPGRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|307084231|ref|ZP_07493344.1| tRNA binding domain protein [Mycobacterium tuberculosis SUMu012] gi|308366152|gb|EFP55003.1| tRNA binding domain protein [Mycobacterium tuberculosis SUMu012] Length = 162 Score = 68.6 bits (166), Expect = 4e-09, Method: Composition-based stats. Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 15/148 (10%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKI 109 + P CA+ D G Q +++CGA N VG L V A PG+ +P ++ RK Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVVVALPGATLP-GGFTISARKA 116 Query: 110 RGIESTGMMCSEKELMLSDDSASIMELP 137 G S GM+CS EL L D + I+ LP Sbjct: 117 YGRNSDGMICSAAELNLGADHSGILVLP 144 >gi|56090156|ref|NP_001007769.1| phenylalanyl-tRNA synthetase beta chain [Danio rerio] gi|55715799|gb|AAH85625.1| Phenylalanine-tRNA synthetase-like [Danio rerio] Length = 590 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 93/416 (22%), Positives = 156/416 (37%), Gaps = 83/416 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 ++ S+G + S+ II G H+ NT +V +E Sbjct: 224 IIYDSNGIVLSMPPIINGNHSKISLNTKNVFIECT------------------------- 258 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS-----------DICIARNITYKPRKIV--FMN 408 DL L IV++ C + +C+ + Y+ + F+N Sbjct: 259 -ATDLTKAKITLDMIVTMFSEYCEQPFTVEEAEVVYPDGRMCVYPELAYRTETLSGEFIN 317 Query: 409 SEVKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V GI+ E ++L R+ V GE + +V +P R DV D++E+ Sbjct: 318 KKV----GINESAESIAQLLTRMCLRSEVSGEDGQIQVEIPPTRSDVIHACDIMEDAAIA 373 Query: 467 YGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE------ 519 YG + I +S P T N T +++ LA+ E + ++ S+E Sbjct: 374 YGFNNIVRSTPRTYTVA----NQLPVNKLTELLRQDLAAAGFTEALTFALCSQEDIADKL 429 Query: 520 -QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 +++ G + I NP +A+ RT LLPGLLK N + +FE+S V Sbjct: 430 RKNMAEIGA---VHISNPKTAEFQVARTCLLPGLLKTVAANRKMPLP-LKLFEISDVVLK 485 Query: 579 DTPE-----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 D + + + A S G E L R + L D K Sbjct: 486 DETKDVGARNNRRLCAIYYNKSPGFEVIHGLLD-------RVMQLLDVKPG--------- 529 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 ++ S + PGR I +S + + G+ G HP+++ F L+ P E+ Sbjct: 530 RDHGYHIQAAEDSTFFPGRCAEIFSSGKSI-GHLGVLHPDVISRFELTMPCSAIEI 584 >gi|213421812|ref|ZP_03354878.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 184 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 13/192 (6%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 VD +D K D +V++ L ++F++ HPG+S I E + G+ G HP + Sbjct: 1 VDFYDLKGDLEAVLDLTGKLGDIQFKAEMNPALHPGQSAAIYLKDERI-GFIGVVHPELE 59 Query: 676 DFFGLSNPICGFEVYLDSIP---ISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPAGT 732 L+ FE+ + + + Q + +S +RD+A +V +++PA Sbjct: 60 RKLDLNGRTLVFELEWNKLADRIVPQAR--------EISRFPANRRDIAVVVAENVPAAD 111 Query: 733 LVNIIKNVDRLIDDVT-VFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 +++ K V +FDV++GK + EG KS+AI +++Q T +++I + + V Sbjct: 112 ILSECKKVGVNQVVGVNLFDVYRGKGVAEGYKSLAISLILQDTNRTLEEEEIAATVAKCV 171 Query: 792 ENVVKKTNAVLR 803 E + ++ A LR Sbjct: 172 EALKERFQASLR 183 >gi|47224827|emb|CAG06397.1| unnamed protein product [Tetraodon nigroviridis] Length = 622 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 91/406 (22%), Positives = 150/406 (36%), Gaps = 64/406 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT +V +E Sbjct: 257 VIYDSNGVVLSMPPIINGDHSKITLNTKNVFIECT------------------------- 291 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG---------TASDICIARNITYKPRKIVFMNSEVK 412 DL VL +V++ C + D I + RK + Sbjct: 292 -ATDLTKAKVVLDMMVTMFSEYCSQPFTVEEAEVVSPDGQIYKYPELPYRKEKLSGQLIN 350 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI+ E ++L R+ G D+ EV +P R DV D+VE+ YG + Sbjct: 351 KKIGINESTEKIAQLLTRMCLLSHPTGVGDEIEVEIPPTRSDVIHACDIVEDAAMAYGFN 410 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-------QSVL 523 I + +P T L L + T +++ LA+ E + ++ S+E + + Sbjct: 411 NI-TRTIPRTYT-IANQLPLNK-LTELMRQELAAAGFTEALTFALCSQEDIADKLRKKI- 466 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 R + I NP +A+ RT+LLPGLLK N + +FE+S V D Sbjct: 467 --TDTRAVHISNPKTAEFQVARTALLPGLLKTIAANRKMPLP-LKLFEISDVVLKD---- 519 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 G RL + + F + + ++E + D R ++ Sbjct: 520 --------ETKDVGTRNCRRLCAIYYNKNSGFEVIHGLLDRTMQLLEVKLGQDGYRIQAA 571 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + PGR I + V G G HP+++ F L+ P E+ Sbjct: 572 DDPTFFPGRCAEIFVHGKSV-GRLGVLHPDVITRFELNMPCSALEM 616 >gi|301791439|ref|XP_002930687.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain-like [Ailuropoda melanoleuca] Length = 589 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 90/411 (21%), Positives = 157/411 (38%), Gaps = 66/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G I S+ +I G H+ NT +V +E Sbjct: 222 VIYDSNGVILSMPPVINGSHSKITVNTRNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYK-----PRKIVFMNSEVK 412 G D VL IV++ C A+++ +Y RK + + Sbjct: 257 -GTDFTKAKIVLDVIVTMFSEYCENQFTVEAAEVVFPNGKSYTFPELAYRKEIVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENIAKLLTRMYLKSEVIGDGNQIEIEIPPTRSDIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ LP T L L + T ++ +A+ E + ++ S+E L Sbjct: 376 NIQMT-LPKT-CTIANQLPLNK-LTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVVKDSSRDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A + G E L R + L + + P + Sbjct: 492 RNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLN--------VPPGEKKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + PGR I + V G G HP+++ F L+ P E+ ++ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|57640860|ref|YP_183338.1| phenylalanyl-tRNA synthetase subunit beta [Thermococcus kodakarensis KOD1] gi|73919750|sp|Q76KA7|SYFB_PYRKO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS; AltName: Full=Tk-pheRSB gi|37665539|dbj|BAC99021.1| phenylalanyl-tRNA synthetase beta-subunit [Thermococcus kodakaraensis KOD1] gi|57159184|dbj|BAD85114.1| phenylalanyl-tRNA synthetase, beta subunit [Thermococcus kodakarensis KOD1] Length = 574 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 87/409 (21%), Positives = 176/409 (43%), Gaps = 63/409 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 +++ S+G++ S+ +I + G T +V V++ WD +N N+ + + Sbjct: 201 LLVDSEGKVLSMPPVINSETTGRVTTETKNVFVDITGWD-LNKVMLALNVVVTALA---- 255 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERG ++ V ++ D+ P++ +++L+G+++ Sbjct: 256 ERGGKIKS--------VKVVYPDFEIETPDLT--------PKEFEVELDYIRKLAGLELS 299 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEPLPL 479 + +LER+ + V E + ++ P++R D+ D++E++L YG ++I+ EP Sbjct: 300 DGEIKELLERMMYEVELENRRAKLRYPAFRDDIMHARDVLEDVLIAYGYNEIEPEEPKLA 359 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-----QSVLFGGGQRE---- 530 Q + + + + V+ ++ + EV+ ++ ++E ++ G Q E Sbjct: 360 VQGRGDKFIEFEDA----VRELMVGFGLQEVMTFNLTNREAQYDRMNLPCGEHQEECRDY 415 Query: 531 --------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 +EI NPIS S +R L+P LL +N +FEV Sbjct: 416 FNHPPAELVEIENPISPKWSALRNWLIPSLLDFLSQNTHEEYPQ-KLFEV---------- 464 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G+ + R+ + E +L + R F + + L + + + E+ Sbjct: 465 GKATLIDESRETKTVSE--SKLAVALAHPRVTFTE----AKEILEGVMRHLGFEYELEEA 518 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 PS + PGR G I + E + G GE HP +L+ +G+ P+ FE++L Sbjct: 519 EHPS-FIPGRVGKIIVNGETI-GVIGEIHPAVLENWGIEMPVAAFELFL 565 >gi|328771362|gb|EGF81402.1| hypothetical protein BATDEDRAFT_19136 [Batrachochytrium dendrobatidis JAM81] Length = 592 Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 89/420 (21%), Positives = 169/420 (40%), Gaps = 83/420 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV+ +D + S+ II G H+ T ++ +E Sbjct: 224 VVMDADNVVLSLPPIINGDHSKIKLTTKNIFIECT------------------------- 258 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS------ 415 DL VL IV++ C + + + RK V+ + ++R+ Sbjct: 259 -ATDLTKAKTVLNTIVTMFSHYCKNQFT-VEPVEVVYPDGRKCVYPDLSLRRVEVGVDYI 316 Query: 416 ----GIDVPIEDSLRILERLG-FSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGV 469 GIDV ++ +R++ ++ F+ + E + V VP R DV D++E+ Y Sbjct: 317 NKSIGIDVTPDELVRLITKMSLFASLSENKQDILVDVPPTRSDVLHACDVMEDAAVAYNF 376 Query: 470 DQI-KSEP--------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 ++I ++ P LP+ ++ + +++ +A EV+ ++ S + Sbjct: 377 NKIIETHPKSNTISVALPINKLAEG------------IRKEIAFSGFTEVLTFTLCSHNE 424 Query: 521 SVLF--GGGQRELEIL-NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + + Q+E IL NP + + +RTSL+PG+LK N A+ I+E+S + Sbjct: 425 NFAYLNKKDQKEAVILSNPKTIEYQVVRTSLMPGILKTLAANKHMALP-IKIYEISDIVL 483 Query: 578 NDTPE-----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 D + Q+ + A +SG+E L R + + D K + Sbjct: 484 RDESQERRARNQRNVCALYSNRTSGLEIVHGLLD-------RIMQILDVKRVDVG----- 531 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + + + PGR + + E+V G FG HP +L FG++ P E+ ++ Sbjct: 532 -QKNGFYIKESDNATFFPGRCADVYFNGEVV-GVFGIVHPKVLGHFGIAFPCSVIELNIE 589 >gi|26345522|dbj|BAC36412.1| unnamed protein product [Mus musculus] Length = 589 Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 90/397 (22%), Positives = 161/397 (40%), Gaps = 38/397 (9%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 222 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 275 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 276 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 324 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 325 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 382 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 441 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P +A+ RT+LLPGLLK N + +FE+S V D+ G G+ Sbjct: 442 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDS---------GKDVGA 491 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 ++ +K+ L D L V P ++ A S + PGR Sbjct: 492 KNYRHLCAVYYNKTPGFEIIHGLLDGIMQLLDV-PPGEESGGYMIKASAGSAFFPGRCAE 550 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 I + + G G HP+++ F L+ P E+ ++ Sbjct: 551 IFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 586 >gi|322709407|gb|EFZ00983.1| phenylalanyl-tRNA synthetase, beta subunit [Metarhizium anisopliae ARSEF 23] Length = 610 Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 103/419 (24%), Positives = 173/419 (41%), Gaps = 46/419 (10%) Query: 298 SPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +P VI RI S+ II G+H+ NTT+V +E+ A L I+ D Sbjct: 211 APVYPVIYDANRIVCSLPPIINGEHSKITLNTTNVFIEIT-------ATDMTKLQIVLDM 263 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 G + P V +I G T + +T+ ++ ++NS +G Sbjct: 264 LVTMFSGYVQE---PFTVEPVKIISEHNGLTRVTPSLKPRVTHA--EVDYLNS----CTG 314 Query: 417 IDVPIEDSLRILERLGF-SVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + E ++L ++ + S + D EVS+P R DV + D++E++ YG ++ Sbjct: 315 LSETPEGLCKLLTKMAYDSKPSDKDPNLLEVSIPPTRADVLHQCDIMEDLAVCYGFNK-- 372 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM---EVVNWSFISKEQSVLF----GG 526 LP T + + V AM EV+ S +++ + Sbjct: 373 ---LPRTAPTRSATIGAPLMINKLADIVRFEAAMAGWSEVLPLILCSHDENFAWLNRKDD 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPE--- 582 G+ + + NP + + +RTSLLPGLLK N ++ F IFEVS V +++++ E Sbjct: 430 GKTAVRLANPKTLEYQIVRTSLLPGLLKTIRENKGHSVP-FKIFEVSDVAFKDESSERKA 488 Query: 583 -GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVD----LFDAKADALSVIEPFVSLD 636 +++ AA SSG E G L S R F+ L ++ V + D Sbjct: 489 RNERHFAAAWCGKSSGFEVVHGLLDRILSMLRTAFLTHDEGLTAKESVDYQVKQNPTKAD 548 Query: 637 SLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + PG + + + +G FG HP +L+ F L P+ E+ L+ Sbjct: 549 GYWIEELKEETFFPGHAAAVHLRLGGKDRRIGEFGIIHPTVLEKFDLRYPVSTLEINLE 607 >gi|153839850|ref|ZP_01992517.1| phenylalanyl-tRNA synthetase beta chain [Vibrio parahaemolyticus AQ3810] gi|149746633|gb|EDM57621.1| phenylalanyl-tRNA synthetase beta chain [Vibrio parahaemolyticus AQ3810] Length = 103 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 1/99 (1%) Query: 706 KVVHLSSLHPVKRDLAFIVDQHIPAGTLVNI-IKNVDRLIDDVTVFDVFQGKSLGEGKKS 764 + V LS +RD+A +VD+ + +G +VN ++ + D +FDV+ GK + EGKKS Sbjct: 4 EAVQLSKFPSNRRDIAVVVDEAVASGDIVNACLEQGGEFLKDAKLFDVYVGKGVEEGKKS 63 Query: 765 VAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 +AI + +Q L+ T D DI +D IV +V +K A LR Sbjct: 64 LAIALTLQSLERTLEDADIAGAVDAIVTHVSEKFGAALR 102 >gi|148985492|ref|ZP_01818681.1| hypothetical protein CGSSp3BS71_10988 [Streptococcus pneumoniae SP3-BS71] gi|237650939|ref|ZP_04525191.1| hypothetical protein SpneC1_09539 [Streptococcus pneumoniae CCRI 1974] gi|237820805|ref|ZP_04596650.1| hypothetical protein SpneC19_00487 [Streptococcus pneumoniae CCRI 1974M2] gi|147922212|gb|EDK73333.1| hypothetical protein CGSSp3BS71_10988 [Streptococcus pneumoniae SP3-BS71] gi|301800687|emb|CBW33333.1| putative tRNA-binding protein [Streptococcus pneumoniae OXC141] Length = 208 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|312867929|ref|ZP_07728133.1| tRNA binding domain protein [Streptococcus parasanguinis F0405] gi|311096333|gb|EFQ54573.1| tRNA binding domain protein [Streptococcus parasanguinis F0405] Length = 208 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 7/145 (4%) Query: 3 FTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CA 61 FT+ TD ++++ L G V++RE F + ++L + +PD D Sbjct: 57 FTIEGKGQVFLTDEQVDRLNQELEKEGFAERLVNDRE--PKFVVGEILEMVAHPDSDHLN 114 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 I ++ G + +Q+V GAPN RVGL + A PG+ +P+ ++I +RG +S GMMCS Sbjct: 115 ICQVAVGPDKTVQIVAGAPNARVGLKTIVALPGAMMPDGSLIFP-GALRGEKSYGMMCSP 173 Query: 122 KELMLSD--DSASIMELPIDAPVGG 144 +EL L + I+EL DA V G Sbjct: 174 RELHLPNAPQKRGIIELD-DAEVAG 197 >gi|225455762|ref|XP_002269751.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297734128|emb|CBI15375.3| unnamed protein product [Vitis vinifera] Length = 592 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 75/271 (27%), Positives = 114/271 (42%), Gaps = 46/271 (16%) Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS------EPLPLTQVEDKRNLSLQQSR 494 K VSVP R DV D+VE++ YG + + +PLPL Q+ D Sbjct: 350 KIIVSVPPTRSDVLHPCDVVEDVGIAYGYNNVPRRKLASLKPLPLNQLSD---------- 399 Query: 495 TRYVKRVLASRAMMEVVNWSFISKEQ--SVLFGGGQRELEIL--NPISADMSNMRTSLLP 550 ++ +A E++ W S ++ S+L + ++ NP SAD +RTSL+P Sbjct: 400 --LIRLEIAMNGFTEILTWILCSYKENFSMLNRKDDKSTAVIIGNPRSADFEVVRTSLMP 457 Query: 551 GLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLW 605 G LK N D IFEV + D + ++ +AA +SG E L Sbjct: 458 GALKTVAHNKDHP-KPIKIFEVGDIAVLDEAKDVGATNRRQLAALYCGANSGFELIHCLV 516 Query: 606 SDKSEE--RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV 663 D+ E C FV + D + + S P + PGR I + + Sbjct: 517 -DRIMEIIGCPFVAVGDDTGYYIKL-------------SNEPEFL-PGRQASIIYRGKHI 561 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G FG HP IL+ F +S+P E+ ++S Sbjct: 562 -GTFGIVHPEILNNFDISDPCSFLELNMESF 591 >gi|148993217|ref|ZP_01822783.1| hypothetical protein CGSSp9BS68_09881 [Streptococcus pneumoniae SP9-BS68] gi|168490102|ref|ZP_02714301.1| emap domain protein [Streptococcus pneumoniae SP195] gi|147928191|gb|EDK79209.1| hypothetical protein CGSSp9BS68_09881 [Streptococcus pneumoniae SP9-BS68] gi|183571542|gb|EDT92070.1| emap domain protein [Streptococcus pneumoniae SP195] gi|332071997|gb|EGI82484.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA17570] Length = 208 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|315187260|gb|EFU21016.1| phenylalanyl-tRNA synthetase beta subunit [Spirochaeta thermophila DSM 6578] Length = 567 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 34/291 (11%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S V++L G+++ E+ + L R+G S E D + P +R D D+ E+I+ +G Sbjct: 298 SAVEKLLGLNLTSEEISQALTRMGVSHTIEGDTITIVPPVYRNDFLHPVDIAEDIMIGHG 357 Query: 469 VDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV-NW-----SFISKEQS 521 +D+ E P T LS + R R VK ++ E++ N+ FI K + Sbjct: 358 MDRFDPEMPRDFTV----GRLSAAEERNRRVKMLMVGMGFQEMIFNYLGSRRDFIEKMRM 413 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + + NP+S + +R S+LP LL A + A+ IFE V + D P Sbjct: 414 ----SDEDAIRVANPLSENYEYVRPSVLPSLLAAESVS-SHAVYPHHIFETGKVAKKD-P 467 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 E GS G L +D + F+ + ++ + ++ E Sbjct: 468 EDN--------YGSKTYNMLGFLSADPKAD-------FNMTSSHVAALCYYLG-KEYTLE 511 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + PGR+ + V G FGE HP +L+ +G++ P E+ LD Sbjct: 512 PKEDPRFVPGRTAALLVGGREV-GIFGEVHPEVLENWGITMPCAACEINLD 561 >gi|148998447|ref|ZP_01825888.1| hypothetical protein CGSSp11BS70_11096 [Streptococcus pneumoniae SP11-BS70] gi|168576681|ref|ZP_02722547.1| emap domain protein [Streptococcus pneumoniae MLV-016] gi|307068530|ref|YP_003877496.1| EMAP domain protein [Streptococcus pneumoniae AP200] gi|147755640|gb|EDK62686.1| hypothetical protein CGSSp11BS70_11096 [Streptococcus pneumoniae SP11-BS70] gi|183577596|gb|EDT98124.1| emap domain protein [Streptococcus pneumoniae MLV-016] gi|306410067|gb|ADM85494.1| EMAP domain protein [Streptococcus pneumoniae AP200] Length = 208 Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|24380314|ref|NP_722269.1| putative phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mutans UA159] gi|24378329|gb|AAN59575.1|AE015020_10 putative phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mutans UA159] Length = 208 Score = 68.2 bits (165), Expect = 6e-09, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD L + L G E EK++N A + F + +++ + +PD D I ++ + + Sbjct: 68 TDEELAVLNAELAKEGFE-EKLENNAA-AKFVVGEIVEMVAHPDSDHLNICQVKIAEDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDDS 130 +Q+V GAPN RVGL + A PG+ +P +I +RG +S GM+CS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPSGGLIFP-GNLRGEKSFGMLCSPRELALPKAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL DA +G Sbjct: 185 RGIIELSTDAVIG 197 >gi|322376112|ref|ZP_08050621.1| tRNA binding domain protein [Streptococcus sp. C300] gi|321278880|gb|EFX55924.1| tRNA binding domain protein [Streptococcus sp. C300] Length = 208 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD +E++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVERLNQELRAEGFAEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN R+GL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARLGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|114583581|ref|XP_001165588.1| PREDICTED: phenylalanine-tRNA synthetase-like, beta subunit isoform 1 [Pan troglodytes] Length = 532 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 165 VIYDSNGVVLSMPPIINGDHSKITVNTRNIFIECT------------------------- 199 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 200 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 258 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 259 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 318 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 319 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 375 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 376 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 434 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 435 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 479 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 480 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 526 >gi|114583583|ref|XP_001165767.1| PREDICTED: phenylalanine-tRNA synthetase-like, beta subunit isoform 2 [Pan troglodytes] gi|114583585|ref|XP_001165802.1| PREDICTED: phenylalanine-tRNA synthetase-like, beta subunit isoform 3 [Pan troglodytes] Length = 490 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 123 VIYDSNGVVLSMPPIINGDHSKITVNTRNIFIECT------------------------- 157 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 158 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 216 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 217 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 276 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 277 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 333 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 334 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 392 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 393 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 437 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 438 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 484 >gi|307186887|gb|EFN72288.1| Probable phenylalanyl-tRNA synthetase beta chain [Camponotus floridanus] Length = 589 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 97/408 (23%), Positives = 165/408 (40%), Gaps = 59/408 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G I S+ II G H+ NT ++ +E D + AR + + S+Y + Sbjct: 221 VIYDSNGIILSLPPIINGDHSKITLNTKNIFIECTATD-LTKARIAVDTIVCAFSQYCSK 279 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV---KRLS--G 416 + V ++ N T+ + + E+ K L+ G Sbjct: 280 KYV---------------------AETVEVVYPDNQTFYYPSLKYRVEEINCNKALNYIG 318 Query: 417 IDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 I E ++L ++ S + + DK V +P R DV D+ E+I YG ++I+ Sbjct: 319 IKQTPEQIAQLLSKMSLKSKVKDNDKLVVEIPPTRHDVIHLCDIYEDIAIAYGYNEIEKT 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----L 531 ++ + + L+ T ++ LA E + +S S+E G + E + Sbjct: 379 IPHMSTIAAEFPLN---KLTDQIRIELAEAGFTEALTFSLCSREDVADKLGYKIEDVPAV 435 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI 591 I NP + + RTSLLPGLLK N + +FEVS V D Sbjct: 436 HISNPKTLEFQVARTSLLPGLLKTISANKKMPLP-HKLFEVSDVVLRDD----------- 483 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA------- 644 K G + RL + + + F + L ++E V + + +SG Sbjct: 484 -KTEVGARNNRRLCAVYANKSAGFEIIHGLVDRILLLLE--VPWSTNKDKSGYYLHAADD 540 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 P+++ P R I + E V+G G HPN+L F L+ P E+ ++ Sbjct: 541 PTFF-PQRCAEIVCNGE-VIGKMGVLHPNVLSKFELNVPCSAMEINIE 586 >gi|15901735|ref|NP_346339.1| hypothetical protein SP_1910 [Streptococcus pneumoniae TIGR4] gi|111657030|ref|ZP_01407830.1| hypothetical protein SpneT_02001744 [Streptococcus pneumoniae TIGR4] gi|14973414|gb|AAK75979.1| conserved hypothetical protein [Streptococcus pneumoniae TIGR4] gi|332199230|gb|EGJ13308.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA41317] Length = 208 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|74147839|dbj|BAE22290.1| unnamed protein product [Mus musculus] Length = 490 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 89/402 (22%), Positives = 162/402 (40%), Gaps = 48/402 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E D ++ L II F Sbjct: 123 VIYDSNGVVLSMPPIINGNHSKITVNTRNIFIECTGTD---FTKAKIVLDIIVT---MFS 176 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + Q + ++ ++S G +++ + Y RK + + + GI Sbjct: 177 EHCENQFTVEAVE-----VVSPNGKSST----FPELPY--RKEMVRADLINKKVGIRETP 225 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ VIG+ ++ EV +P R DV D+VE+ YG + I+ + L Sbjct: 226 ANLAKLLTRMCLKSEVIGDGNQIEVEIPPTRADVIHACDIVEDAAIAYGYNNIQ---MTL 282 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILN 535 + N T ++ +A+ E + ++ S+E L + + I N Sbjct: 283 PKTYTIANQFPLNKLTELLRLDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISN 342 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 +A+ RT+LLPGLLK N + +FE+S V D+ + +++ A Sbjct: 343 TKTAEFQEARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDSGKDVGAKNYRHLCAV 401 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ A S + P Sbjct: 402 YYNKTPGFEIIHGLLD-------RIMQLLD--------VPPGEESGGYMIKASAGSAFFP 446 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR I + + G G HP+++ F L+ P E+ ++ Sbjct: 447 GRCAEIFVGGQSI-GKLGVLHPDVITKFELTMPCSSLEINIE 487 >gi|149634089|ref|XP_001505735.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus] Length = 669 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 154/411 (37%), Gaps = 67/411 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ T +V +E Sbjct: 303 VIYDSNGVVLSMPPIINGDHSKITLKTRNVFIECT------------------------- 337 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG----TASDICIARNITYKPRKIVFMNSEVK----- 412 G DL VL IV++ C A+++ +Y ++ + VK Sbjct: 338 -GTDLTKAKIVLDIIVTMFSEYCEKRFTVEAAEVIYPDGKSYVYPELAYRKEVVKADLIN 396 Query: 413 RLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI ++L R+ V G+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 397 KQVGISETPASLAKLLTRMYLKSEVKGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 456 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + ++ L+ RY LA+ E + ++ S+E L Sbjct: 457 NIQMTIPKTYTIANQFPLNKLTELLRY---DLAAAGFTEALTFALCSQEDIADKLGLDIS 513 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 514 AVKAVRIANPKTAEFQVARTTLLPGLLKTVAANRKMPLP-LKLFEISDIVVKDSSRDVGA 572 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 +++ A +SG E L RF+ L D A Sbjct: 573 RNLRHLCAVYYNKTSGFEVIHGLLD-------RFMQLLDISAGGEK---------GYSIR 616 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + S + PGR I + + G G HP+++ F L+ P E+ ++ Sbjct: 617 AAEDSAFFPGRCAEILAKGQSI-GKLGVLHPDVITKFELTMPCSALEINIE 666 >gi|322371496|ref|ZP_08046045.1| phenylalanyl-tRNA synthetase subunit beta [Haladaptatus paucihalophilus DX253] gi|320549028|gb|EFW90693.1| phenylalanyl-tRNA synthetase subunit beta [Haladaptatus paucihalophilus DX253] Length = 604 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 95/385 (24%), Positives = 152/385 (39%), Gaps = 73/385 (18%) Query: 346 SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 +G+ + T+SR F G D Q I + I+ L GGT ++ + Y R Sbjct: 256 NGRRTEVETESRDLFIELTGTD-QWTIDKMCAIICYALDARGGTIEEVAVE----YDDRT 310 Query: 404 IVFMNSEV----------KRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPS 448 +V + EV + L GI+ ++ + +L R G S E + +EV +P Sbjct: 311 LVRPDFEVTTKDVTHDRIETLLGIEFTPDEVVELLARSGLSGDAEETEDGTVTYEVEIPP 370 Query: 449 WRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 +R DV D+V++I R YG + + + V + S + R VL Sbjct: 371 YRVDVLHPVDIVDDIGRAYGFNDLSPRYPDVGTVGGRHERSQLEDAAR---EVLVGLGFE 427 Query: 509 EVVNWSFISKEQSV----------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 +++N+ IS+E++ + GGG I NP S D + +RT LP L+ Sbjct: 428 DLLNFHMISEEENYERMRVEPETDVVGGGT-PAAIKNPYSEDYTMLRTWALPSLMMVLEN 486 Query: 559 NVDRA----IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N R + + + EN + +A + + + E Sbjct: 487 NTHRTYPQDLTEIGLAARVDESENTGVAEHRTVAGVLARHDASYE--------------- 531 Query: 615 FVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGE 669 DAKA +V F V L++ P HP GR+ + E V G GE Sbjct: 532 -----DAKARLQAVARNFDVGLET-------PPTEHPTFITGRAASVVIDGETV-GVIGE 578 Query: 670 FHPNILDFFGLSNPICGFEVYLDSI 694 HP +L L P+ GFE LD++ Sbjct: 579 IHPEVLVEHDLEVPVTGFEFRLDAL 603 >gi|114583579|ref|XP_526043.2| PREDICTED: phenylalanyl-tRNA synthetase beta chain isoform 5 [Pan troglodytes] Length = 589 Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSKITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|70607253|ref|YP_256123.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus acidocaldarius DSM 639] gi|76363437|sp|Q4J8Q0|SYFB_SULAC RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|68567901|gb|AAY80830.1| phenylalanyl-tRNA synthetase beta chain [Sulfolobus acidocaldarius DSM 639] Length = 542 Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 92/403 (22%), Positives = 163/403 (40%), Gaps = 53/403 (13%) Query: 295 YD-LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 YD LSP ++ +G + SI II D+ T ++ ++V + L I+ Sbjct: 187 YDGLSP--AIVEENGDVLSIPPIINSDKTRIDEKTRNIFIDVT---GTSFEAVSSTLDIL 241 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 ++L I K S +L + S I++N+ Sbjct: 242 VTDLAEMGGKIELLNFISPSKFEFSPLLRRYTVSVSANYISKNL---------------- 285 Query: 414 LSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 GI++ + + + L F D EV+VP +R D+ + DLVEEI G D++ Sbjct: 286 --GINLSLNEIEKYLRMARFDTKVLNDVVEVTVPPYRVDILSQIDLVEEIAMTIGYDKLS 343 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 + ++ LS + R ++ + E+ ++FI L + I Sbjct: 344 PKDY---TIKATGKLSAETELIRTLRDLSIGAGFSEI--FTFILSNDKRL---RNEYVSI 395 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 +NP++ + + +R SL+P LL N AI +FE+ V D ++ Sbjct: 396 VNPVTVEYNAVRNSLIPTLLNFLKYN-QHAIMPVYVFEIGDVVIKD------------KR 442 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYHPGR 652 +G + S R + + DL V + +SLD +++ + PGR Sbjct: 443 TDTGYKNSLRAVYGIMNSKVNYEDL------QSRVHQILMSLDIEPTYKTYLDDMFIPGR 496 Query: 653 -SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + II TS + +G GE +P +L+ + P+ E+YLDS+ Sbjct: 497 GAKIIDTSKSVEIGVIGEINPVLLEELEIEFPVVISEIYLDSL 539 >gi|116511246|ref|YP_808462.1| EMAP domain-containing protein [Lactococcus lactis subsp. cremoris SK11] gi|116106900|gb|ABJ72040.1| EMAP domain [Lactococcus lactis subsp. cremoris SK11] Length = 208 Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 4/96 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ ++ +PD D I +++ G +Q+VCGAPN +GL V A PG+ +P N Sbjct: 96 FVVAEIVEMQDHPDSDHLHICKVNVGFADPVQIVCGAPNASLGLKTVAALPGAMMP-NGA 154 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMEL 136 ++ +RG++S GM+CS +EL L D D I+EL Sbjct: 155 LIFPGALRGVQSYGMLCSARELELPDAPDVRGIIEL 190 >gi|159905801|ref|YP_001549463.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus maripaludis C6] gi|238686976|sp|A9AA58|SYFB_METM6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|159887294|gb|ABX02231.1| phenylalanyl-tRNA synthetase, beta subunit [Methanococcus maripaludis C6] Length = 554 Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 129/302 (42%), Gaps = 65/302 (21%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++ + ++ +++ G + E V +P++R D+ DL EEI YG ++ + + Sbjct: 293 GLNLNPGEIIQAVKKSGMDALYEDGNLIVKIPAYRNDILHNVDLKEEIAINYGYEKFEGK 352 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----- 530 L V + + + + ++ EV+N + Q LF E Sbjct: 353 ---LPSVATTGSKDSVEKKCSAMSDLMIGLGFYEVMNLTL--SNQDTLFEKMNLEVEEKD 407 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH---VYENDTPEGQKY 586 +E+L P S + +RTS+LP LL+ N ++ IFE+ + ENDT Sbjct: 408 YIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQ-KIFEIGDCVIIDENDT------ 460 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA-- 644 +++ +C+ + K A ++ P + + ++ +GA Sbjct: 461 ---------------------ETDTKCK-----NIKKIAGAITHPLTNFNEIKSSTGALL 494 Query: 645 ---------PSWYHP----GR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 ++ HP GR + IIK E+ G+FGE HP ++ F L +PI GFE+ Sbjct: 495 REFFEDFEFENYEHPAFIPGRCAKIIKDRKEV--GFFGEIHPEVILNFELEHPIVGFEIT 552 Query: 691 LD 692 ++ Sbjct: 553 IE 554 >gi|158256494|dbj|BAF84220.1| unnamed protein product [Homo sapiens] Length = 589 Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGAVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|257865431|ref|ZP_05645084.1| hypothetical protein EGAG_00302 [Enterococcus casseliflavus EC30] gi|257871766|ref|ZP_05651419.1| hypothetical protein ECAG_00313 [Enterococcus casseliflavus EC10] gi|257875033|ref|ZP_05654686.1| hypothetical protein ECBG_00288 [Enterococcus casseliflavus EC20] gi|257799365|gb|EEV28417.1| hypothetical protein EGAG_00302 [Enterococcus casseliflavus EC30] gi|257805930|gb|EEV34752.1| hypothetical protein ECAG_00313 [Enterococcus casseliflavus EC10] gi|257809199|gb|EEV38019.1| hypothetical protein ECBG_00288 [Enterococcus casseliflavus EC20] Length = 204 Score = 67.4 bits (163), Expect = 8e-09, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V S +PD D +I + G + +Q+VCGA N+R GL V A PG+ +P+ MI Sbjct: 100 VKSCVEHPDSDHLSITETEVGDGEVLQIVCGAANIRKGLKVVVAKPGAMMPDGLMIWP-G 158 Query: 108 KIRGIESTGMMCSEKELMLSDD--SASIMELPIDAPVG 143 +RG+ES GM+CS KEL L I+ELP DA VG Sbjct: 159 TLRGVESFGMICSAKELHLEGAPMKKGILELPQDAVVG 196 >gi|325569121|ref|ZP_08145368.1| tRNA binding domain protein [Enterococcus casseliflavus ATCC 12755] gi|325157579|gb|EGC69737.1| tRNA binding domain protein [Enterococcus casseliflavus ATCC 12755] Length = 204 Score = 67.4 bits (163), Expect = 9e-09, Method: Composition-based stats. Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V S +PD D +I + G + +Q+VCGA N+R GL V A PG+ +P+ MI Sbjct: 100 VKSCVEHPDSDHLSITETEVGDGKVLQIVCGAANIRKGLKVVVAKPGAMMPDGLMIWP-G 158 Query: 108 KIRGIESTGMMCSEKELMLSDD--SASIMELPIDAPVG 143 +RG+ES GM+CS KEL L I+ELP DA VG Sbjct: 159 TLRGVESFGMICSAKELHLEGAPMKKGILELPQDAVVG 196 >gi|67970828|dbj|BAE01756.1| unnamed protein product [Macaca fascicularis] Length = 593 Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 87/404 (21%), Positives = 156/404 (38%), Gaps = 54/404 (13%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ +Y ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSYTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + L + N T ++ +A+ E + ++ S+E L Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRYDMAAAGFTEALTFALCSQEDIADKLGLDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-PEGQK 585 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ E + Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTECIQ 491 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 Y+ G+ ++ +K+ L D L V P ++ Sbjct: 492 YV------GAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLLDV-PPGEDKGGYVIKASEG 544 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + PGR I + V G G HP+++ F L+ P E+ Sbjct: 545 PAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 587 >gi|15672372|ref|NP_266546.1| hypothetical protein L195751 [Lactococcus lactis subsp. lactis Il1403] gi|12723263|gb|AAK04488.1|AE006276_3 hypothetical protein L195751 [Lactococcus lactis subsp. lactis Il1403] gi|326405966|gb|ADZ63037.1| Putative tRNA-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 208 Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 4/109 (3%) Query: 38 REALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC 96 +A F + +++ +E +PD D I +++ G +Q+VCGAPN +GL V A PG+ Sbjct: 90 HDAQPKFVVAEIVEMEDHPDSDHLHICKVNVGFADPVQIVCGAPNAALGLKTVAALPGAM 149 Query: 97 IPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 +P ++I +RG++S GM+CS +EL L + + I+EL D G Sbjct: 150 MPNGSLIFP-GALRGVQSYGMLCSARELELPNAPEVRGIIELSSDLSAG 197 >gi|290579713|ref|YP_003484105.1| putative phenylalanyl-tRNA synthetase subunit beta [Streptococcus mutans NN2025] gi|254996612|dbj|BAH87213.1| putative phenylalanyl-tRNA synthetase beta subunit [Streptococcus mutans NN2025] Length = 208 Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD L + L G E EK++N +A + F + +++ + +PD D I ++ + + Sbjct: 68 TDEELAVLNAELAKEGFE-EKLEN-DAAAKFVVGEIVEMVAHPDSDHLNICQVKIAEDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDDS 130 +Q+V GAPN RVGL + A PG+ +P +I +RG +S GM+CS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPSGGLIFP-GNLRGEKSFGMLCSPRELALPKAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL DA +G Sbjct: 185 RGIIELSTDAVIG 197 >gi|255660050|ref|ZP_05405459.1| hypothetical protein MgenG_00200 [Mycoplasma genitalium G37] gi|1361697|pir||F64249 hypothetical protein MG449 - Mycoplasma genitalium Length = 144 Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 11/130 (8%) Query: 43 PFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 PF + +V+SV + +++TG + + +VCGA NVRVG+ V G +P + Sbjct: 20 PFVVCEVVSVIPIANTHLKRCKVNTGLTKSLDIVCGANNVRVGMKTVLVQVGGVLPSGTV 79 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 I KI G +S GM+CSEKEL L + I+E+ VG P IDV L Sbjct: 80 IKKT-KIAGFDSVGMLCSEKELNLKQKNEGIIEINPKIKVG----------KPFIDVYLN 128 Query: 163 PNRSDCIGVR 172 S + + Sbjct: 129 KQHSKWVNTK 138 >gi|119591210|gb|EAW70804.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_c [Homo sapiens] gi|194376670|dbj|BAG57481.1| unnamed protein product [Homo sapiens] Length = 490 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 123 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 157 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 158 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 216 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 217 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 276 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 277 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 333 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 334 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 392 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 393 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 437 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 438 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 484 >gi|124028525|ref|NP_005678.3| phenylalanyl-tRNA synthetase beta chain [Homo sapiens] gi|296452943|sp|Q9NSD9|SYFB_HUMAN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 589 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|7768938|dbj|BAA95608.1| phenylalanyl tRNA synthetase [Homo sapiens] Length = 589 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARVQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|307719846|ref|YP_003875378.1| phenylalanyl-tRNA synthetase subunit beta [Spirochaeta thermophila DSM 6192] gi|306533571|gb|ADN03105.1| phenylalanyl-tRNA synthetase, beta subunit [Spirochaeta thermophila DSM 6192] Length = 567 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 74/291 (25%), Positives = 124/291 (42%), Gaps = 34/291 (11%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 S V++L G++ E+ + L R+G S E D + P +R D D+ E+I+ +G Sbjct: 298 SAVEKLLGLNFTSEEISQALTRMGVSHTIEGDTITIVPPVYRNDFLHPVDIAEDIMIGHG 357 Query: 469 VDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV-NW-----SFISKEQS 521 +D+ E P T LS + R R VK ++ E++ N+ FI K + Sbjct: 358 MDRFDPEMPRDFTV----GRLSAAEERNRRVKMLMVGMGFQEMIFNYLGSRRDFIEKMRV 413 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + + NP+S + +R S+LP LL A + A+ IFE V + D P Sbjct: 414 ----SDEDAIRVANPLSENYEYVRPSVLPSLLAAESVS-SHAVYPHHIFETGKVAKKD-P 467 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 E GS G L +D + F+ + ++ + ++ E Sbjct: 468 EDN--------YGSKTYNMLGFLSADPKAD-------FNMTSSHVAALCYYLG-KEYTLE 511 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + PGR+ + V G FGE HP +L+ +G++ P E+ LD Sbjct: 512 PKEDPRFVPGRTAALLVGGREV-GIFGEVHPEVLENWGITMPCAACEINLD 561 >gi|332246657|ref|XP_003272469.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain [Nomascus leucogenys] Length = 589 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|290790148|pdb|3L4G|B Chain B, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790150|pdb|3L4G|D Chain D, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790152|pdb|3L4G|F Chain F, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790154|pdb|3L4G|H Chain H, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790156|pdb|3L4G|J Chain J, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790158|pdb|3L4G|L Chain L, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790160|pdb|3L4G|N Chain N, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|290790162|pdb|3L4G|P Chain P, Crystal Structure Of Homo Sapiens Cytoplasmic Phenylalanyl-T Synthetase gi|4104933|gb|AAD02220.1| putative phenylalanyl-tRNA synthetase beta-subunit [Homo sapiens] gi|17389486|gb|AAH17783.1| Phenylalanyl-tRNA synthetase, beta subunit [Homo sapiens] gi|119591208|gb|EAW70802.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_a [Homo sapiens] Length = 589 Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|37588956|gb|AAH06502.2| FARSB protein [Homo sapiens] Length = 585 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 218 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 252 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 253 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 311 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 312 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 371 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 372 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 428 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 429 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 487 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 488 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 532 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 533 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 579 >gi|6841566|gb|AAF29136.1|AF161521_1 HSPC173 [Homo sapiens] Length = 589 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG----TASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENRFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 536 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 537 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|257868736|ref|ZP_05648389.1| hypothetical protein EGBG_00324 [Enterococcus gallinarum EG2] gi|257802900|gb|EEV31722.1| hypothetical protein EGBG_00324 [Enterococcus gallinarum EG2] Length = 203 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 5/107 (4%) Query: 41 LSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L P +V V + E +PD D ++ + G+ + +Q+VCGA N+R GL V A PG+ +P Sbjct: 91 LEPKIVVGYVKTCEPHPDSDHLSVTETEVGEGEVLQIVCGAANIRKGLKVVVAKPGAMMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDD--SASIMELPIDAPVG 143 + +++ +RG++S GM+CS +EL L++ I+ELP DA VG Sbjct: 151 -DGLLIWPGTLRGVDSYGMICSARELHLANAPLKKGILELPQDAVVG 196 >gi|227505054|ref|ZP_03935103.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198342|gb|EEI78390.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 140 Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 14/128 (10%) Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLA 721 I++GY GE HP +L+ L C E+ + ++P + LS+ + +D+A Sbjct: 2 IIVGYAGELHPQVLEALNLPARTCAMEIDVTALPTDELFPAPV-----LSAFPALHQDIA 56 Query: 722 FIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 IVD+ PA + +++ L++ V +FDVF+G+ LG KKS+A +++ FR Sbjct: 57 LIVDESTPAEEVRKVVEEGAGELLEAVELFDVFRGEQLGADKKSLAFKLI-------FRA 109 Query: 781 DDIRILMD 788 DD R L D Sbjct: 110 DD-RTLTD 116 >gi|13357750|ref|NP_078024.1| hypothetical protein UU192 [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|167972083|ref|ZP_02554360.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 6 str. ATCC 27818] gi|168282299|ref|ZP_02689966.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|168308454|ref|ZP_02691129.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|170761884|ref|YP_001752273.1| tRNA-binding domain-containing protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|11356785|pir||F82921 conserved hypothetical UU192 [imported] - Ureaplasma urealyticum gi|6899157|gb|AAF30599.1|AE002119_4 conserved hypothetical [Ureaplasma parvum serovar 3 str. ATCC 700970] gi|168827461|gb|ACA32723.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 3 str. ATCC 27815] gi|171902720|gb|EDT49009.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 1 str. ATCC 27813] gi|182675708|gb|EDT87613.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 14 str. ATCC 33697] gi|186700716|gb|EDU18998.1| putative tRNA binding domain protein [Ureaplasma parvum serovar 6 str. ATCC 27818] Length = 197 Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats. Identities = 43/110 (39%), Positives = 63/110 (57%), Gaps = 5/110 (4%) Query: 35 VDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPG 94 +DN A F + K+L V P+ I +D G Q+IQ++CGA NVR+GL V A P Sbjct: 82 LDN--AFKGFVVGKILEVNLIPNTHLHICLVDIGD-QQIQIICGAQNVRIGLKTVVATPN 138 Query: 95 SCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD-DSASIMELPIDAPVG 143 +P N I K+ +S GM+CS+KEL +++ +S I+EL + VG Sbjct: 139 LLMPNGNEI-KKSKLMNYDSFGMLCSQKELNINNFNSQGIVELNDEYQVG 187 >gi|289581369|ref|YP_003479835.1| phenylalanyl-tRNA synthetase subunit beta [Natrialba magadii ATCC 43099] gi|289530922|gb|ADD05273.1| phenylalanyl-tRNA synthetase, beta subunit [Natrialba magadii ATCC 43099] Length = 572 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 88/386 (22%), Positives = 161/386 (41%), Gaps = 74/386 (19%) Query: 346 SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-------- 395 +G+ + T+SR F G D Q I + +IV L+ G T D+ + Sbjct: 223 NGRRTEVSTESRDLFVEMTGTD-QWTIDKMLNIVCYALAARGATIEDVTVQYPDHELVRP 281 Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK------FEVSVPSW 449 +++ K + + + ++ + G+++ ++ + + ER G E + +E ++P + Sbjct: 282 DLSTKTKSV--PHKRIETILGLNLDPDEVVDLAERSGLEATKEDSEDAGKLVYEFTIPPY 339 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV--EDKRNLSLQQSRTRYVKRVLASRAM 507 R DV D+++++ R YG ++++ E + V KR+ +RT+ L Sbjct: 340 RVDVLHPLDVIDDLGRAYGFNELEPEYPDVGTVGGRHKRSRLEDAARTQ-----LVGLGF 394 Query: 508 MEVVNWSFISKEQSV----------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 +++N+ IS+E++ +G G+ I P S D + +RT ++P LL Sbjct: 395 EDLLNFHMISEEENYERLDVAPDADAYGAGEAAT-IKEPYSEDFTMLRTWVMPSLLMVLE 453 Query: 558 RNVDRA----IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 RN RA +A+ EN Q+++ A + +G E Sbjct: 454 RNTHRAYPQHLAEIGFTAAVDERENTGVTEQRHVGAVLANHDAGYE-------------- 499 Query: 614 RFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFG 668 DAKA ++ F V L++ P HP GR+ + E V G G Sbjct: 500 ------DAKARLQALARRFDVELET-------PPTEHPTFISGRTAAVVIDGEEV-GVIG 545 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSI 694 E HP +L L P+ FE L ++ Sbjct: 546 EVHPKVLVEHDLEVPVAAFEFELAAL 571 >gi|312385377|gb|EFR29897.1| hypothetical protein AND_00831 [Anopheles darlingi] Length = 533 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/396 (21%), Positives = 153/396 (38%), Gaps = 57/396 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ + NT +V +E D +T +R Sbjct: 169 VIYDSNGVVLSLPPIINGDHSKINLNTKNVFIECTATD-------------LTKARV--- 212 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMN-----SEVK 412 VL +V + C + D+ A T++ + F ++ Sbjct: 213 ----------VLDTLVCMFSVHCAKPYTVEYCDVVSATGETHQYPDLQFRRETISVAKTN 262 Query: 413 RLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 + GID P E ++L RL + D EV VP R D+ D+ E++ YG +++ Sbjct: 263 AIIGIDEPAEQMAKLLNRLLPTRQTGPDTLEVEVPPTRHDMLHACDIYEDVAIAYGYNRV 322 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-- 530 + LP ++ + L + T ++ +A E + ++ +++ + E Sbjct: 323 -PKTLP-AKMHIAKQYPLNK-LTEQLREQIAQAGFTEGLTFTLCARDDIGAKMNAKIEQL 379 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + I NP + + +RT+L+PGLLK N + +FEVS V D Sbjct: 380 PAVHIANPKTLEFQVVRTTLIPGLLKTLAANRKMPLP-LKLFEVSDVVLADA-------- 430 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLRFESGAPSW 647 K G + R+ + + F + + ++E P+ E+ Sbjct: 431 ----KAEVGAKNERRVCAVNCNKTAGFEVVHGLLDRVMQLLEVPWDKTSGYYLEACDDPA 486 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 Y PGR + + G G HP +L F ++ P Sbjct: 487 YFPGRCASVLYKGTPI-GRIGVLHPTVLQAFEITTP 521 >gi|307708001|ref|ZP_07644474.1| tRNA binding domain protein [Streptococcus mitis NCTC 12261] gi|307615952|gb|EFN95152.1| tRNA binding domain protein [Streptococcus mitis NCTC 12261] Length = 208 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|315611707|ref|ZP_07886629.1| tRNA binding domain protein [Streptococcus sanguinis ATCC 49296] gi|315316122|gb|EFU64152.1| tRNA binding domain protein [Streptococcus sanguinis ATCC 49296] Length = 208 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD--S 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPLK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|242785064|ref|XP_002480515.1| phenylalanyl-tRNA synthetase, beta subunit [Talaromyces stipitatus ATCC 10500] gi|218720662|gb|EED20081.1| phenylalanyl-tRNA synthetase, beta subunit [Talaromyces stipitatus ATCC 10500] Length = 596 Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 125/594 (21%), Positives = 239/594 (40%), Gaps = 102/594 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIAL--------------DLVAAGLGKLKEINIS------CP 194 P + + + NR D + GIAL LV G+L++I + P Sbjct: 50 PQLKIDIPANRYDLLCFEGIALMLNVFLGRKPFPNYRLVQPASGQLEKIIVKEDTTKIRP 109 Query: 195 LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDIT 253 S +I + FD + + F G+++ + N RQR L ++G + + Sbjct: 110 YVSGAILRNVTFD---EARYQSFI-----GLQDKLHQNIARQRTLVSIGTHDLDTIKGPF 161 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVI 304 Y +L P + R + L + +GE+++A +++ L SP VI Sbjct: 162 TYEALP---PKDI----RFTP-LNQTKEMNGEELMAFYDKDRHLGRYLHIIRDSPVYPVI 213 Query: 305 ASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 R+ S+ II G H+ +T +V +E+ D + K + + S Y E Sbjct: 214 YDSNRVVCSLPPIINGDHSKITLDTKNVFIEITALDKTKLEIVNK-IMVTMFSLYTSE-- 270 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V +I G T I+ T ++ ++N + +++ E+ Sbjct: 271 -------PFTIEPVEIISEHNGETRVTPDISARTTQA--ELSYIN----QCCDLNLSAEE 317 Query: 424 SLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L ++ + + +V +P R D+ + D++E++ YG +++ Sbjct: 318 VSKLLTKMAYKARPSKTSSNLIDVDIPPTRADILHQVDIMEDVAIAYGFNELPRSFPSKS 377 Query: 474 ---SEPLPLTQVEDKRNLSLQQS-RTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 ++PLP+ ++ D L + + + +L S N+++++++ + G Sbjct: 378 GTIAQPLPVNKLTDIIRLEAAMAGWSEVLPLILCSHDE----NFAWLNRKDN-----GNT 428 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQ 584 +++ NP + + +RTSLLPGLLK N + IFEVS V D + Sbjct: 429 AVKLANPKTLEFQVVRTSLLPGLLKTLKENRYHTVP-MKIFEVSDVAFKDLSLERKSRNE 487 Query: 585 KYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 ++ AA +SG E G L + + F+ + + VS E Sbjct: 488 RHFAAAWYGKTSGFEVVHGLLDRVMAMLKSAFITGEEGLENTA------VSESRYWIEEL 541 Query: 644 APSWYHPGRSGIIKTS---AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y PG + + + E V+G FG HP +L+ + L P+ E+ +++ Sbjct: 542 DDPTYFPGHAASVHVNIGGKEQVIGSFGILHPTVLENYELKLPVSTLEINIEAF 595 >gi|322390751|ref|ZP_08064263.1| tRNA binding domain protein [Streptococcus parasanguinis ATCC 903] gi|321142578|gb|EFX38044.1| tRNA binding domain protein [Streptococcus parasanguinis ATCC 903] Length = 208 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/134 (35%), Positives = 73/134 (54%), Gaps = 7/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L G V++RE F + ++L + +PD D I ++ G + Sbjct: 68 TDEQVARLNQELEREGFAERLVNDRE--PKFVVGEILEMVAHPDSDHLNICQVAVGPDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ ++I +RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPDGSLIFP-GALRGEKSYGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVGG 144 I+EL DA V G Sbjct: 185 RGIIELD-DAEVAG 197 >gi|221046382|dbj|BAH14868.1| unnamed protein product [Homo sapiens] Length = 490 Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 155/408 (37%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 123 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 157 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 158 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 216 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 217 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 276 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 277 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGSTEALTFALCSQEDIADKLGVDIS 333 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 334 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 392 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L R + L D + P + Sbjct: 393 KNYRHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIK 437 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + PGR I + V G G HP+++ F L+ P E+ Sbjct: 438 ASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 484 >gi|307104656|gb|EFN52909.1| hypothetical protein CHLNCDRAFT_36718 [Chlorella variabilis] Length = 630 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 100/420 (23%), Positives = 172/420 (40%), Gaps = 39/420 (9%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ + R+ S+ II G H+ +T DV +E D +N A+ N + S+Y E Sbjct: 237 VIYDAQRRVLSLPPIINGAHSAISLDTRDVFIECTATD-LNKAKMVLNTVVAMFSQY-CE 294 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 R +++ V ++ +L R + + ++N + G D+ Sbjct: 295 RPFEVEP--------VEVVDALGNTHVYPQLDTRQMEVA---VPYINGCI----GTDLAA 339 Query: 422 EDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L ++ + D + V VP R DV D++E++ YG + + +P Sbjct: 340 DKIAQLLSKMQLTATPAADGSRVSVQVPITRSDVLHACDVMEDVAIAYGYNNLVKR-VPK 398 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG------GQRELEI 533 T V + L L Q ++ A E++ W+ S ++ FG G + I Sbjct: 399 T-VTAGKELPLNQM-CELLRGECAMAGFTEILTWALCSHAEN--FGQLLRHDDGDTAVCI 454 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG-----QKYMA 588 NP +A+ RTSLLPG LK G N D + +FEVS V +G + + Sbjct: 455 GNPATAEFEVCRTSLLPGALKTLGSNRDAPLP-VKLFEVSDVILLTGSKGCGAANCRRLV 513 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 A + ++G E L ++ E DA A + R AP+++ Sbjct: 514 AVLCDRAAGFEVIHGLL-NRVMEVLGVPHSGDADPAAEKQRQRLGGGYDWRAADDAPTFF 572 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVV 708 PGR + V G FG HP++L F + NP+ E+ L+ Q R +++ Sbjct: 573 -PGRHAGVYFRGTRV-GEFGIIHPDVLVAFDIINPVAAMELDLEPFCFDQLGRQLETQIL 630 >gi|306830039|ref|ZP_07463225.1| tRNA binding domain protein [Streptococcus mitis ATCC 6249] gi|304427752|gb|EFM30846.1| tRNA binding domain protein [Streptococcus mitis ATCC 6249] Length = 208 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D +E++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVERLNQELQTEGFAEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +++V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VKIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|17533403|ref|NP_495785.1| phenylalanyl (F) tRNA Synthetase family member (frs-2) [Caenorhabditis elegans] gi|12229986|sp|Q19713|SYFB_CAEEL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3876233|emb|CAA90360.1| C. elegans protein F22B5.9, confirmed by transcript evidence [Caenorhabditis elegans] Length = 591 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 87/417 (20%), Positives = 158/417 (37%), Gaps = 74/417 (17%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q + + P V+ +G + S+ II G+H+ NT +V +E Sbjct: 216 QNHPVYP--VIYDKNGVVCSMPPIINGEHSKITLNTKNVFIEAT---------------- 257 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGG--TASDICIARNIT--------YKPR 402 D Q VL IV+L C T + + T R Sbjct: 258 ----------ATDKQKAFVVLDTIVTLFSQYCAKPFTIEQVEVVYEETGVKELYPLLSYR 307 Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVE 461 ++ E+ GI++ E+ +L ++ + + ++ VP R D+ D+ E Sbjct: 308 EMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVAAKETLKIVVPPTRHDILHACDIAE 367 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFISK 518 ++ +G + + +T++ + +++ + + +A+ E +N++ S+ Sbjct: 368 DVGVAFGYNNL------ITKLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFALCSR 421 Query: 519 E--QSVLFG--GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 + S L + I NP + + RTSLLPGLLK N D + +FE+ Sbjct: 422 DDISSKLRQPDALSHAVHIGNPKTLEFQVARTSLLPGLLKTLSSNRDMPLP-LKLFELQD 480 Query: 575 VYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 V D+ ++ +AA ++G E + F + + + Sbjct: 481 VIVKDSNTDVGARNERRLAAVYYNRAAGFE---------------IIQGFLDRIMRMLNV 525 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 P E+ S Y PGR I +VLG+ G HP ++ FGL+ P CG Sbjct: 526 NPARDGTGYYIEADENSTYFPGRCAKIIGPKGVVLGHIGALHPEVITSFGLTLP-CG 581 >gi|307208644|gb|EFN85934.1| Probable phenylalanyl-tRNA synthetase beta chain [Harpegnathos saltator] Length = 590 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 107/468 (22%), Positives = 179/468 (38%), Gaps = 99/468 (21%) Query: 266 VFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIA-SDGRIQ 311 ++DA S++ L + +GE+I+ L L SP VI ++G + Sbjct: 172 LYDAKPPSEIYFKPLNQEKEYTGEEIMELYATHAQLKHYLPIIKDSPVYPVIYDNNGIVL 231 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S+ II G H+ NT ++ +E DL Sbjct: 232 SLPPIINGNHSKITLNTKNIFIECT--------------------------ATDLTKAKI 265 Query: 372 VLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMNSEV-----KRLSGIDVPIE 422 VL +V C + ++ T+ + + E+ + GI+ E Sbjct: 266 VLDTVVCAFSQYCSTKYTAEIVEVVYPNKQTFYYPDLKYRTEEIDCKKARNYIGINETPE 325 Query: 423 DSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEP---- 476 +L ++ S + ++ K +V +P R DV D+ E+I YG ++I K+ P Sbjct: 326 QIATLLSKMSLKSTVKDHCKLDVEIPPTRHDVIHHCDIYEDIAIAYGYNEIEKTVPHMST 385 Query: 477 ----LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-- 530 LPL ++ D+ + L Q+ E + +S S+E G + E Sbjct: 386 IAAELPLNKLTDQMRIELAQA------------GFTEALTFSLCSREDLADKLGHKIEDI 433 Query: 531 --LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + I NP + + RT+LLPGLLK N + IFEVS V D M Sbjct: 434 PAVHISNPKTLEFQVARTTLLPGLLKTICSNKKMPLP-HKIFEVSDVVLRDDT-----MD 487 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA---- 644 G R + RL + + + F + ++V+E V + + E+G Sbjct: 488 VGAR-------NNRRLCAVYANKSAGFEIIHGLIDRMMTVLE--VPWSTNKDENGYYLRA 538 Query: 645 ---PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P+++ P R I EI+ G G HP++L F L+ P E+ Sbjct: 539 ANDPAYF-PQRCAEIVCYGEII-GKLGVLHPDVLSKFELNIPCSSMEI 584 >gi|329769476|ref|ZP_08260887.1| hypothetical protein HMPREF0433_00651 [Gemella sanguinis M325] gi|328838807|gb|EGF88403.1| hypothetical protein HMPREF0433_00651 [Gemella sanguinis M325] Length = 201 Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 3/107 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +VL+ E++PD D + + + + +Q+VCGAPNV G V + G+ +P + + Sbjct: 92 FVVGEVLTCEKHPDADKLKVTTVKVSEDEVLQIVCGAPNVEAGQKVVVSLIGAMMP-SGL 150 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSA-SIMELPIDAPVGGRLSD 148 ++ K+RG+ES GM+CS++EL L + I+ L D VG + D Sbjct: 151 LIKKSKLRGVESNGMLCSKRELGLPQEEVRGILVLENDVEVGTKFKD 197 >gi|306824642|ref|ZP_07457987.1| tRNA binding domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304433210|gb|EFM36181.1| tRNA binding domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 208 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G E ++++E F + +++ + +PD D I ++ + Sbjct: 68 TDEQVARLNQELQAEGFAEEIINDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVSSDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|145504649|ref|XP_001438291.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124405463|emb|CAK70894.1| unnamed protein product [Paramecium tetraurelia] Length = 576 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 88/404 (21%), Positives = 171/404 (42%), Gaps = 43/404 (10%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ + R+ S+ II G+H+ T ++L+EV D R+ L + + Sbjct: 201 VIYDNQKRVCSLPPIINGEHSKMSAETRNILIEVTAIDE---QRALHTLNCLISGFAIYN 257 Query: 362 RGVDLQGMIPVL----KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 + ++++ + V K +V+ I+ + + NI Y + ++ GI Sbjct: 258 QKLNIEKVNIVYELSQKQVVTPIVD-------ERTLTTNIQY-----------INKILGI 299 Query: 418 DVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE- 475 ++ + + +L +G SV + + + VP +R D+ ++ D+ EEI Y ++I+ + Sbjct: 300 NITTQQACDLLLTMGIDSVAKDENILDCQVPFYRSDILQQCDIAEEIGIAYDYNKIEFKV 359 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFG--GGQRELE 532 P T + R L + V+ +A +E +N+ +S EQ+ + Q + Sbjct: 360 PETATTGSEYRLNKL----SDMVREEVALCGFVECLNFVLMSIDEQTKMLNRPNLQNYVS 415 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + N + ++R++L+PG+L N D + +FEVS V +G K G + Sbjct: 416 LNNSKTPQFQSVRSTLIPGILHTLQANSDSKLP-IKLFEVSDV----CVKGLKSEKDGFQ 470 Query: 593 KGSS--GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 KG G L + S + +++ D L + D +S P ++H Sbjct: 471 KGEGQVGAHNQRNLVAIHSSSKKTELEILHGLLDQLMIKLRVKKTDYHLKQSNDPLFFHQ 530 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ II I G G HP +L+ F P+ E+ + I Sbjct: 531 LQAQIIYKDQPI--GGLGVVHPEVLERFDWKYPVTLLEMNIQVI 572 >gi|322516546|ref|ZP_08069462.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] gi|322124934|gb|EFX96354.1| phenylalanyl-tRNA synthetase beta subunit [Streptococcus vestibularis ATCC 49124] Length = 117 Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats. Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 2/105 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV+ ++ + +++ G+EVE V+ E LS + VL+ E P+ Sbjct: 1 MLVSYKWLKELVDVDVTTAELAEKMSTTGIEVEGVETPSEGLSKLVVGHVLTCEDVPETH 60 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 + ++DTG + Q+VCGAPNV G+ + A PG+ I +N I Sbjct: 61 LHLCQVDTGDAEGPRQIVCGAPNVTAGIKVIVAIPGARIADNYKI 105 >gi|124803468|ref|XP_001347727.1| phenylalanyl-tRNA synthetase beta chain, putative [Plasmodium falciparum 3D7] gi|23495977|gb|AAN35640.1| phenylalanyl-tRNA synthetase beta chain, putative [Plasmodium falciparum 3D7] Length = 623 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 130/610 (21%), Positives = 247/610 (40%), Gaps = 109/610 (17%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLE----IKFD--LD 209 I + + NR D I V G+ L + K +I +++ I ++ IK D +D Sbjct: 46 IYKIEVPANRYDLICVEGLCRAL-KNFMCKFDDIKYDISMNNYDICIKGNQYIKVDGSVD 104 Query: 210 DSSLCKGFAMCCV-------KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGY 262 D +G+ +CCV V NN+ + RS+ A + I +Y + Sbjct: 105 DR---RGYVVCCVLKNMNINDSVYNNIIEIQEKLHHNLGKKRSVLA-IGIHDYDKIKFPL 160 Query: 263 PSHVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPD----------NVVIASDGRIQ 311 +I+ + L + +G ++ ++ +L P +++ S+ +I Sbjct: 161 KYKFEKKEKINFIPLNEKTNLNGMNLIDFYSKNLNLKPYLKIIKDFDKYPIIVDSNEQIL 220 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S+ II H NT +V +E D N A+ N+ S Y + +Q + Sbjct: 221 SLPPIINCDHTKISLNTKNVFIECTAIDR-NKAQIALNILCSMLSEYCVPK-YSIQSFVV 278 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKI---VFMNSE-------VKRLSGI-DVP 420 + ++ D +N+ K + +F N V++LSGI + Sbjct: 279 IYEN-------------QDFSDDQNLKKKETQFLYPIFENKSLTCNIDYVRKLSGISHIT 325 Query: 421 IEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + + +L+R+ S I + + F+V++P +R D+ D++E+I YG IK EP Sbjct: 326 VHEVNNLLKRMMLSCDIMDNNTFKVTIPFYRSDIMHCCDIIEDIAIAYGYGNIKYEP--- 382 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--------LFGGGQREL 531 Q+ K +L+ + + + VL EV+ + +S++++ + L Sbjct: 383 PQICKKHSLN---NCSELFRNVLVECGYTEVMTNALLSRDENYNCMLRTHKSYDDPNINL 439 Query: 532 EILNPISA----------DMSNMRTSLLPGLLKATGRNVDRAIA--DFAIFEVSHVYEND 579 + NP++A + +RTSL+ LLK N R + F I +VS+ N Sbjct: 440 DEYNPLAAPIQIKNSKTSEYEIIRTSLIVNLLKFVSANKHRELPLRFFEIGDVSYATYNQ 499 Query: 580 TPE---GQKYMA--------AGIRKGSSGIEG---SGRLWSD-KSEERCRFVDLFDAKAD 624 T +KY++ AG+ + +E +L+SD K EE+ + + ++D Sbjct: 500 TDTNAVNKKYLSIIFSDKFTAGLEELHGVLEAILKEYQLFSDYKIEEKKK--ENISIRSD 557 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 + P PS+ + I+ + G G HP +L+ F L P+ Sbjct: 558 MYYKLIP----------KEDPSFLNERIVDIVLFPHNLKFGVLGIIHPKVLENFSLDIPV 607 Query: 685 CGFEVYLDSI 694 E+ ++++ Sbjct: 608 SAIEINVETL 617 >gi|322693780|gb|EFY85629.1| phenylalanyl-tRNA synthetase, beta subunit [Metarhizium acridum CQMa 102] Length = 610 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 102/419 (24%), Positives = 172/419 (41%), Gaps = 46/419 (10%) Query: 298 SPDNVVIASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 +P VI RI S+ II G+H+ NTT+V +E+ A L I+ D Sbjct: 211 APVYPVIYDANRIVCSLPPIINGEHSKITLNTTNVFIEIT-------ATDMTKLQIVLDM 263 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 G + P V +I G T + +T+ ++ ++NS +G Sbjct: 264 LVTMFSGYVQE---PFTVEPVKIISEHNGLTRVTPSLKPRVTHA--EVDYLNS----CTG 314 Query: 417 IDVPIEDSLRILERLGF-SVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + E ++L ++ + S + D +VS+P R DV + D++E++ YG ++ Sbjct: 315 LSETPEGLCKLLTKMAYDSKPSDKDPNLLQVSIPPTRADVLHQCDIMEDLAVCYGFNK-- 372 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM---EVVNWSFISKEQSVLF----GG 526 LP T + + V AM EV+ S +++ + Sbjct: 373 ---LPRTAPTRSATIGAPLMINKLADIVRFEAAMAGWSEVLPLILCSHDENFAWLNRKDD 429 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YENDTPE--- 582 G+ + + NP + + +RTSLLPGLLK N ++ F IFEVS V +++++ E Sbjct: 430 GKTAVRLANPKTLEYQIVRTSLLPGLLKTIRENKGHSVP-FKIFEVSDVAFKDESAERKA 488 Query: 583 -GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVD----LFDAKADALSVIEPFVSLD 636 +++ AA SSG E G L S R F+ L ++ V + D Sbjct: 489 RNERHFAAAWCGKSSGFEVVHGLLDRILSMLRTAFLTHDEGLTAKESVDYQVKQNPCKAD 548 Query: 637 SLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + PG + + +G FG HP +L+ F L P+ E+ L+ Sbjct: 549 GYWIEELKEDTFFPGHAAAVHLRLGGKNRRIGEFGIIHPTVLEKFDLRYPVSTLEINLE 607 >gi|289192701|ref|YP_003458642.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus sp. FS406-22] gi|288939151|gb|ADC69906.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus sp. FS406-22] Length = 550 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 42/264 (15%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYV 498 +K +V +P++R DV + D+ EE+ YG ++ E P+ T E L+ + + ++ Sbjct: 316 NKIKVYIPAYRVDVFGEIDIAEEVAIAYGYNKFSGEYPIIGTIGE----LNQLEKKCDFI 371 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLK 554 + ++ EV+N + E VLF + E +E+L P S + +R S+LP L++ Sbjct: 372 REIMVGFGFYEVINLMLSNDE--VLFKKMRIEDNNYIEVLKPASIEHRIVRKSILPLLME 429 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N + + IFE+ D E + A I+K + I + +++ Sbjct: 430 TLRINKHKELPQ-KIFEIGDCVVID--ENSETRAKTIKKIAGVIVDNETNFNE------- 479 Query: 615 FVDLFDAKADALSVIEPFVS--LDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFG 668 I+ +V L L+ E ++ HP GR I +I+ GYFG Sbjct: 480 --------------IKSYVEGLLRELKIEYELDNFEHPSFIKGRCAKIIKDGKII-GYFG 524 Query: 669 EFHPNILDFFGLSNPICGFEVYLD 692 E HP ++ F L P+ GFE+ +D Sbjct: 525 EIHPEVITNFELEFPVVGFELEID 548 >gi|297842003|ref|XP_002888883.1| hypothetical protein ARALYDRAFT_476389 [Arabidopsis lyrata subsp. lyrata] gi|297334724|gb|EFH65142.1| hypothetical protein ARALYDRAFT_476389 [Arabidopsis lyrata subsp. lyrata] Length = 591 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 110/264 (41%), Gaps = 52/264 (19%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKS------EPLPLTQVEDKRNLSLQQSRTR 496 +V VP R DV D++E++ YG + I + +PLPL ++ D + + Sbjct: 352 KVHVPPSRSDVLHPCDVMEDVAIAYGFNNIPTRKPASIKPLPLNELTDLLRIEI------ 405 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPG 551 A EVV W S +++ F R + I NP SAD MR +L+PG Sbjct: 406 ------AMNVYTEVVTWLLCSHKEN--FAMLNRVDDNSAVIIGNPRSADFEAMRRTLMPG 457 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLWS 606 +LK G N D I+E+S V D + ++++AA +SG E Sbjct: 458 ILKTVGSNKDHP-KPIKIYEISDVAMLDESKDVGASNRRHLAALHCGATSGFE------- 509 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSL---DSLRFESGAPSWYHPGRSGIIKTSAEIV 663 L D + +++ PFV + + + + PGR I + + Sbjct: 510 -------LIHGLVDRIMEVMAI--PFVKINDNNGYYIKLSQEPEFLPGRQASIVVRGKQI 560 Query: 664 LGYFGEFHPNILDFFGLSNPICGF 687 G FG HP +L+ F + +P C F Sbjct: 561 -GNFGIVHPQVLNNFDIPDP-CSF 582 >gi|298674471|ref|YP_003726221.1| phenylalanyl-tRNA synthetase subunit beta [Methanohalobium evestigatum Z-7303] gi|298287459|gb|ADI73425.1| phenylalanyl-tRNA synthetase, beta subunit [Methanohalobium evestigatum Z-7303] Length = 540 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 128/570 (22%), Positives = 228/570 (40%), Gaps = 92/570 (16%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSS---ESIPLE 203 +D + D ID+ P+R D V G+A L +NI L +S +E Sbjct: 31 ADIERIEDEYIDIEFFPDRPDLYSVEGVARALRGF-------LNIETGLQDYRLDSSNIE 83 Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVAP-----------NWM--RQRLK-AVGLRSISAL 249 I+ D D + A ++ V N +W R R K ++G+ +S + Sbjct: 84 IEKDEDIEHIRPYLACAVIRNVNFNANSIKSLMDLQEDLHWGVGRDRKKVSIGVHDLSNI 143 Query: 250 VDITNYVSLD---RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIAS 306 Y++ D + P + ++ +L + G K A + ++ P +++ + Sbjct: 144 TPPFRYMAADPDTKFIPLDFTEPMSMNQIL--EKHPKGMK-FAYILEGFNEYP--IILDA 198 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVA-LWDPINIARSGKNLGIITDSRYRFERGVD 365 D + S II +NTTD+ ++V L + + +A L ++ + ERG Sbjct: 199 DDNVLSFPPIINSTRTQITENTTDLFIDVTGLSESVYVA-----LNVLVTALA--ERG-- 249 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 G + +K I S T D+ +P SE+ L G ++ ++ L Sbjct: 250 --GSVESVKIIDS---DGNEKTLPDL--------EPLSCELEVSEINSLIGTELSQDEIL 296 Query: 426 RILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVED 484 + L+R+ + I EV VP +R D+ D+VE+I YG D I+ E Sbjct: 297 KQLQRMRYGADIKNNKSIEVKVPPYRADILHNYDIVEDIAIGYGYDNIQPEFPESATFGS 356 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISA 539 +S+ + ++ EV+ SF + V F R +++PIS Sbjct: 357 AHEVSVTSDN---ICEIMTGLGYSEVM--SFTLSNERVHFDNMCRNRTDDVTYVMHPISE 411 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 D + +RT++LP L++ N R + +IFE V N+ I + + + Sbjct: 412 DQTMVRTTILPNLMEILSMNQHRELPQ-SIFEFGDVVINNK----------IHRNLAAV- 459 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 F D+ + DA+ + E V + ES P++ R+ I+ Sbjct: 460 --------SIHPEVNFTDIREI-VDAV-MRERMVEYEVE--ESDDPAFIGGRRADILVNG 507 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 ++ G GE +P ++ FGL P+ GFE+ Sbjct: 508 KKV--GVMGEIYPQVITNFGLGEPVIGFEM 535 >gi|327267051|ref|XP_003218316.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain-like [Anolis carolinensis] Length = 600 Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 157/415 (37%), Gaps = 75/415 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT +VL+E Sbjct: 234 VIYDSNGVVLSMPPIINGDHSKISLNTKNVLIECT------------------------- 268 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDIC-------IARNITYKPRKIV--FMN 408 DL VL +V++ C T A+++ I + Y+ KI MN Sbjct: 269 -ATDLTKAKIVLDILVAMFSEYCQKTFTAEAAEVLYPNGKSHIFPELPYRREKIKPEIMN 327 Query: 409 SEVKRLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 ++ GI + ++L R+ VIG + EV +P R D+ D++E+ Sbjct: 328 KKI----GICETPSNLAKLLTRMCLKSHVIGNGNNIEVEIPPTRPDIIHACDIIEDAAIA 383 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 YG + I+ + + + N T +++ LA+ E + ++ S+E G Sbjct: 384 YGYNNIQ---MTIPKTYTIANQLPLNKLTELLRQDLAAAGFTEALTFALCSQEDIANKLG 440 Query: 527 ----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 + + I NP +A+ RT+LLPG+LK N + +FE+S + D+ + Sbjct: 441 IDISATKAVHIANPKTAEFQVARTTLLPGILKTVAANRKMPLP-LKLFEISDIVVKDSTK 499 Query: 583 -----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 +++ A + G E L R + L D + S D Sbjct: 500 DVGARNHRHLCAIYYNKNPGFEIIHGLLD-------RIMQLLDVSPSKENGYYIKASEDP 552 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 F + GRS +G G HP+++ F L+ P E+ ++ Sbjct: 553 AFFPGRCAEIFAKGRS----------IGNLGVLHPDVITKFELTMPCSVLEITIE 597 >gi|193599054|ref|XP_001944944.1| PREDICTED: probable phenylalanyl-tRNA synthetase beta chain-like [Acyrthosiphon pisum] Length = 589 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 115/280 (41%), Gaps = 46/280 (16%) Query: 431 LGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEP--------LPLTQ 481 L +V+ E D V VP R D+ DL E++ YG + I K+ P LP+ Sbjct: 335 LKSAVLKESDMVVVEVPPTRHDIIHACDLYEDVAIAYGYNNIPKTLPKTTTIGSQLPINS 394 Query: 482 VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPI 537 + DK ++ +A EV+ +S SK+ QR + I NP Sbjct: 395 LSDK------------IRNEIAYCGFNEVLTFSLCSKDDVSTKIRKPFDTQRTVCISNPK 442 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE----GQKYMAAGIR 592 + + RT++L GLLK T N + +FEV+ V ++DT E ++++ A Sbjct: 443 TLEFQVARTNILSGLLKTTSANKKMPLP-MKLFEVTDVVLKDDTSEVGARNERHVCAIYY 501 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 + G E L R + + D K + S + + ++ Y PGR Sbjct: 502 GKTPGFEIVHGLMD-------RIMQMLDVKFSSESG-------STYQIKAANDETYFPGR 547 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 I V+G G HP ++ + L+ P FE+ L+ Sbjct: 548 CAQIIYQGN-VIGLMGVLHPEVITAYELTMPCSAFEINLE 586 >gi|307710834|ref|ZP_07647262.1| putative tRNA binding domain protein [Streptococcus mitis SK321] gi|307617440|gb|EFN96612.1| putative tRNA binding domain protein [Streptococcus mitis SK321] Length = 208 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|187918379|ref|YP_001883942.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia hermsii DAH] gi|238689293|sp|B2S0L6|SYFB_BORHD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|119861227|gb|AAX17022.1| phenylalanyl-tRNA synthetase beta chain [Borrelia hermsii DAH] Length = 564 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 43/296 (14%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V R+ G + + D L++LG S E DKF + P +R D + D++EEI+ G+ Sbjct: 298 VNRMFGSNFTVNDMCLDLKKLGISAYFKELDKFYIIPPVYRNDFLHEVDVIEEIMIGRGL 357 Query: 470 DQIKSEPLP-------LTQVEDK----RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 D K E LP L+Q+E+ +NL + + L SR FI K Sbjct: 358 DSFKPE-LPKDFTLGKLSQIEEFSRKIKNLMIGMGFQEMIYNYLGSRT-------DFIEK 409 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 L + NP++ +R S++P LLK+ + + IFE+ V Sbjct: 410 MNI----KSDEFLSVANPMTEGYEYVRGSIVPDLLKSESISSNFPYPH-KIFEIGKVALK 464 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 D G+ + L +DK F+ +S + +++++ Sbjct: 465 DLSS---------VDGTMTYDNLAFLMADKEFS-------FNEINSLVSSLFYYLNIE-F 507 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + + Y GR I + +I+LG FGE P IL FG+ P C E+ L+ I Sbjct: 508 KLRESSQTLYINGRGADILIN-DIILGSFGEVSPYILSNFGIMVPCCVLEINLNKI 562 >gi|83286660|ref|XP_730258.1| Phe-RNA synthetase [Plasmodium yoelii yoelii str. 17XNL] gi|23489931|gb|EAA21823.1| Phe-RNA synthetase-related [Plasmodium yoelii yoelii] Length = 388 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 23/204 (11%) Query: 398 TYKPRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVE 454 +K +K+ V++LSGI D+ I+D ++L+++ SV D FEV+VP +R D+ Sbjct: 117 NFKNKKLTCDIEYVRKLSGIKDITIDDVKKLLKKMMISVTDVLDNTTFEVNVPFYRSDIM 176 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQ------VEDK-RNLSLQQSRTRYVKRVLASRAM 507 D+VE+I YG D IK EP+ +++ V D RN + S T + L S + Sbjct: 177 HACDIVEDIAIAYGYDNIKYEPIEISKKHLLNTVSDMFRNSMTECSYTEVITNALLS--L 234 Query: 508 MEVVNW---SFISKEQSV------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 E +W I+ + S + ++I+N +++ +RTSL+ LLK Sbjct: 235 KENYDWMLRKHINYDTSFDDKLVNNYNPLYPPVQIMNSKTSEYEIVRTSLIVNLLKFVAA 294 Query: 559 NVDRAIA--DFAIFEVSHVYENDT 580 N R + F I ++S+ N T Sbjct: 295 NKHRELPLRFFEIGDISYTMNNKT 318 >gi|170579164|ref|XP_001894706.1| phenylalanyl-tRNA synthetase beta chain [Brugia malayi] gi|158598574|gb|EDP36441.1| phenylalanyl-tRNA synthetase beta chain, putative [Brugia malayi] Length = 602 Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 97/425 (22%), Positives = 168/425 (39%), Gaps = 84/425 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ +G + S+ II G+H +T ++L+EV D + A+ N + S+Y Sbjct: 225 VIRDKNGIVLSMPPIINGEHTKIQLSTRNILIEVTATD-LEKAKIVLNTIVSMFSQYTSN 283 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG---ID 418 D + ++S+ GT + Y M VK ++G ++ Sbjct: 284 GTEDNASFLVEPVEVISV-----DGTKHE--------YPDLSDRLMVVNVKSINGRIGLN 330 Query: 419 VPIEDSLRILERLGFSVI-----GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 + E+ +L ++ D EV VP R D+ + D+ E++ YG ++I+ Sbjct: 331 LKAEEMCSLLNKMSLKTQLHLKEKSQDLLEVRVPITRADILHECDVAEDVAIAYGFNRIE 390 Query: 474 S---------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVL 523 EP PL ++ D ++ +A+ E +N++ S++ SV Sbjct: 391 QQFPKSYTTGEPFPLNKLTD------------LLRYDIAAAGWTETLNFALCSRDDISVK 438 Query: 524 F---GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 ++ ++I NP +++ RTSLLPGLLKA N D + +FE+ V D Sbjct: 439 LRKPDNLKQAVKISNPKTSEFQVARTSLLPGLLKALASNKDMPLP-LRLFEIQDVVLKDL 497 Query: 581 PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV----SLD 636 G R ER RF L+ K+ +I + L Sbjct: 498 -----IADVGARN-----------------ER-RFCALYCGKSSGFEIIHGLLDRVMQLL 534 Query: 637 SLRFESGAPSWYHP---------GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 +++ +Y GR I A I LG G HPN++ FGL+ PI Sbjct: 535 GIKWTKDGTGYYIAACDDPTYLDGRCAEIIGPAGISLGRVGVLHPNVITAFGLALPISVI 594 Query: 688 EVYLD 692 ++ ++ Sbjct: 595 DITIE 599 >gi|84489335|ref|YP_447567.1| phenylalanyl-tRNA synthetase subunit beta [Methanosphaera stadtmanae DSM 3091] gi|121731866|sp|Q2NGX9|SYFB_METST RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|84372654|gb|ABC56924.1| PheT [Methanosphaera stadtmanae DSM 3091] Length = 559 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 127/589 (21%), Positives = 228/589 (38%), Gaps = 104/589 (17%) Query: 147 SDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKF 206 SD D + PNR D V GI L G +L++ + + + Sbjct: 33 SDVESYDDVEVKAEFFPNRPDYYSVEGIVRSL--KGYLELEKGIPEYDVKKTDTTITVDS 90 Query: 207 DLDDSSLCKGFAMCC-VKGVR--NNVAPNWM-----------RQRLK-AVGLRSISALVD 251 +L++ + + CC +K V+ +N N M R R K A+G+ + + Sbjct: 91 ELEN---IRPYVACCMIKNVKIDDNQLRNIMEFQEHLHWVIGRDRKKVAIGIHDLDKVEG 147 Query: 252 ITNYVSLDRGYPSHVFDASRISDVLT--VRRACSGEKILALDNQEYDLSPDNVVIASDGR 309 Y + + S + SR + L + GEK L +E+D P +++ +G Sbjct: 148 PFYYKAGNPNETSFIPLESRENLTLNEILENHEKGEKYAKL-LKEFDKYP--LIVDGNGN 204 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGM 369 I S+ II + TT++ ++V G D+ + Sbjct: 205 IMSMPPIINSELTKLTTKTTNLFIDVT--------------------------GTDINAV 238 Query: 370 IPVLKHIVSLILSLCGGTASDICIAR----NITY---KPRKIVFMNSEVKRLSGIDVPIE 422 L +I++ LS G T I + N TY +P+ I + GID+ + Sbjct: 239 TNAL-NIIAANLSENGATIETIEVNYPYHDNKTYPDFEPKIIDVHTKTAQEYIGIDLTAD 297 Query: 423 DSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 + LE+ F+ I E + V+VP +R D+ + D++E I YG +++ P L Sbjct: 298 KIVETLEKTRFNATKINE-ETVRVTVPRYRIDILHEVDIIENIALGYGFNEL---PAQLP 353 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE-----ILN 535 N ++ + +++V+ + E+ + S+ Q + ++E+E + Sbjct: 354 DFATVANPDSKRQFDQILEQVMIGLSFTEIKSLMLTSETQH--YTKLRKEVEEDRVTVAQ 411 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIAD--FAIFEVSHVYENDTPEGQKYMAAGIRK 593 PI+ D + +R SL+ LL+ N + F I +V+++ EN + M + Sbjct: 412 PITQDRTMIRKSLINSLLEFLEDNKHEELPQKIFEIGDVAYINEN----AETKMVTVKKL 467 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL--DSLRFESGAPSWYHPG 651 ++ I + K S++E FV+ + E S + G Sbjct: 468 AAAQISSVANFTTIK------------------SIVESFVANMGFEMELEDHDDSAFIKG 509 Query: 652 RSG------IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 R + K + GYFGE HP +L F L P+ FEV + Sbjct: 510 RCAKFTTKPLNKNTPFTFKGYFGEIHPEVLTNFELEYPVIAFEVEFSEV 558 >gi|15791264|ref|NP_281088.1| phenylalanyl-tRNA synthetase subunit beta [Halobacterium sp. NRC-1] gi|169237022|ref|YP_001690222.1| phenylalanyl-tRNA synthetase subunit beta [Halobacterium salinarum R1] gi|24418719|sp|Q9HMK3|SYFB_HALSA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|229470687|sp|B0R807|SYFB_HALS3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|10581897|gb|AAG20568.1| phenylalanyl-tRNA synthetase subunit beta [Halobacterium sp. NRC-1] gi|167728088|emb|CAP14876.1| phenylalanine--tRNA ligase beta subunit [Halobacterium salinarum R1] Length = 567 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 87/378 (23%), Positives = 152/378 (40%), Gaps = 64/378 (16%) Query: 346 SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTASDICIA---RNITYK 400 +G+ + TDSR F G D Q I + I+ L G T D+ + R + ++ Sbjct: 224 NGRRTEVTTDSRELFVELTGTD-QWTIDRMCAIICYALDARGATIEDVTVDYPDREL-HR 281 Query: 401 P----RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 P R + ++ L G++ E + + ER G D ++V +P +R DV Sbjct: 282 PDFAVRTKHVSHDRIETLLGVEFTTEAVVDLAERAGLDATPTDDGYDVEIPPYRVDVRHP 341 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D+V+++ R Y + + P R S + R+ V++ L +++N++ Sbjct: 342 VDVVDDLGRAYDFNDLTPR-YPDVNTIGGRTESSRLERS--VRQALVGLGFEDLLNFNMT 398 Query: 517 SKEQSVLFG-----------GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA 565 S+ ++ F G + I P S D + +RT LP L N A Sbjct: 399 SEAEN--FDRMRLTPDHDAVGAAQPATIAEPYSQDFTILRTWALPSLAMVLETNTHHAYP 456 Query: 566 -DFAIFEVSHVYENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 D A + + DT G ++ +AA + + + E DA Sbjct: 457 QDLAEVGFAAHADGDTQTGVAERRTVAAVLARNDASYE--------------------DA 496 Query: 622 KADALSVIEPF-VSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNILD 676 KA ++ + F V+L++ P HP GR+ I+ + G GE HP ++ Sbjct: 497 KARLQALCDEFAVALET-------PPTTHPSFIDGRAATIEIDGQPA-GVIGELHPGVIV 548 Query: 677 FFGLSNPICGFEVYLDSI 694 + P+ GFE LD++ Sbjct: 549 EHDVEVPVAGFEFELDAL 566 >gi|319940255|ref|ZP_08014607.1| tRNA-binding domain-containing protein [Streptococcus anginosus 1_2_62CV] gi|319810557|gb|EFW06893.1| tRNA-binding domain-containing protein [Streptococcus anginosus 1_2_62CV] Length = 208 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 TD + + L+ G E E V++ LSP F + +++ + +PD D I ++ + Sbjct: 68 TDEEISILNQELSQAGFEPELVND---LSPKFVVGEIVEMVAHPDSDHLNICQVKVAADK 124 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 125 VVQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPNAPQ 183 Query: 130 SASIMELPIDAPVG 143 I+EL VG Sbjct: 184 KRGIIELASSEVVG 197 >gi|332158913|ref|YP_004424192.1| phenylalanyl-tRNA synthetase subunit beta [Pyrococcus sp. NA2] gi|331034376|gb|AEC52188.1| phenylalanyl-tRNA synthetase subunit beta [Pyrococcus sp. NA2] Length = 556 Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 108/472 (22%), Positives = 192/472 (40%), Gaps = 64/472 (13%) Query: 245 SISALVDITNYVSLDRGYPSH-----VFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 S+S ++ + V+L G +FD ++ + R A EK L +E Sbjct: 118 SLSQIIQLQEKVALTFGRRRREVAIGIFDFDKVKPPIYYRAAEKTEKFAPLGYKEEMTLE 177 Query: 300 DNVVIASDGRIQSIAGIIGGK--HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + + GR II K + D+ +VL ++ IN +G+ + TD+R Sbjct: 178 EILEKHEKGR--EYGHIIKDKPYYPLLVDSEGNVL---SMPPIINSEFTGR---VTTDTR 229 Query: 358 YRF--ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-----PRKIVFMNSE 410 F G L ++ L +V+ + G S + R+ K PR+ Sbjct: 230 NVFIDVTGWRLDKVMLALNVMVTALAERGGRIKSVKVVYRDFEIKTPDLTPREFEVDLDY 289 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 ++RLSG+ + E+ +LER+ + V + +K +V P++R D+ D++E++L YG + Sbjct: 290 IRRLSGLKLSNEEIKELLERMMYEVEIKENKAKVKYPAFRDDIMHARDILEDVLIAYGYN 349 Query: 471 QIKSEPL---------PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 I+ E P ED ++ ++ + E++ ++ +K+ Sbjct: 350 NIEPEEPKLAVQGRGDPFKDFEDA------------IRELMVGFGLQEIMTFNLTNKDAQ 397 Query: 522 VLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + E +EI NP+S S +R LLP L++ N IFEV V D Sbjct: 398 FNKMNIEEEDIVEIANPVSMKWSVLRKWLLPSLMEFLSNNTHEEYPQ-RIFEVGLVTLID 456 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 K + K + + GSG +++ E + D L + Sbjct: 457 ERLETKTRSEP--KLAVALAGSGYTFTNAKE-------ILDGLMRHLDI--------EYE 499 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 E + PGR G I + E + GE HP +L+ +G+ P+ FE++L Sbjct: 500 LEETEHGSFIPGRVGKIIVNGEEIGII-GEIHPQVLENWGIEVPVVAFELFL 550 >gi|254820442|ref|ZP_05225443.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium intracellulare ATCC 13950] Length = 170 Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 7/136 (5%) Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKV 707 +HPGR + + +GY G+ HP + + GL C E+ LD++P+ Sbjct: 19 WHPGRCAEVLV-GDTTVGYAGQLHPAVTERSGLPKGTCALELDLDAVPL-----VAALPA 72 Query: 708 VHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKKSVA 766 +S V +D++ +V +PA + + ++ L++D+ +FDVF G +GE +KS+ Sbjct: 73 PRVSPFPAVFQDVSLVVPADVPAQAVADAVREGAGELLEDLQLFDVFTGPQIGEDRKSLT 132 Query: 767 IQVLIQPLKDTFRDDD 782 + + T +DD Sbjct: 133 FALRFRAPDRTLTEDD 148 >gi|304314925|ref|YP_003850072.1| phenylalanyl-tRNA synthetase, beta chain [Methanothermobacter marburgensis str. Marburg] gi|302588384|gb|ADL58759.1| phenylalanyl-tRNA synthetase, beta chain [Methanothermobacter marburgensis str. Marburg] Length = 551 Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 139/623 (22%), Positives = 242/623 (38%), Gaps = 135/623 (21%) Query: 122 KELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAA 181 KEL + D ++E+ P+ G SD + D I V PNR D + V G+A L Sbjct: 12 KELGIDIDRERLIEV---LPMMG--SDIEDFDDEGIKVEFFPNRPDLLSVEGVARSLRGF 66 Query: 182 GLGKLKEINISCPLSSESIP-LEIKFDLDDSSLC--KGFAMCCVKGVRNNVAPNWMRQRL 238 + I + S +P +I+ +D+S L M ++ VR ++Q + Sbjct: 67 -------LGIETGMPSYDVPESDIEVTVDESVLNVRPHLGMAVIENVR--FTDKKLKQVM 117 Query: 239 K-------AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDV----------LTVRRA 281 + +G + I + LDR P V+ V +T R Sbjct: 118 EFQEDLHWVIGRDRKKVAIGIHD---LDRVEPPFVYSGVEPEGVTFTPLESVCEMTPREI 174 Query: 282 CS------GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEV 335 L D++ Y L D +G + S+ II G+ T +LV+V Sbjct: 175 LEEHPKGVAYAHLLRDHERYPLITDK-----NGDVLSLPPIINGELTKLTTETERILVDV 229 Query: 336 ALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 D ER V+ Q + +I+ + GG + + R Sbjct: 230 TGTD---------------------ERAVN-QAL-----NIICTSFAESGGVIRSVTVRR 262 Query: 396 NIT------YKPRKIVFMNSEVKRLSGIDVPIEDSLRIL--ERLGFSVIGEYDKFEVSVP 447 + P+++ S ++GI++ + +L R+ S++ D+ +P Sbjct: 263 PESELRLPDLTPKEMSVSVSTASHITGIELDAAEIKELLMKARMDASIVSP-DEVLAVIP 321 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVKRVLASR 505 ++R D+ + DLVE I Y + +I EPL + + ++ N + ++++ V+ Sbjct: 322 AYRVDILHEVDLVENIATQYCIGRI--EPLIPEVATIAEEDNWNRAD---KFIRDVMVGL 376 Query: 506 AMMEVVNWSFISKE---QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 EV++ S+E Q + +R +++ PIS D + +R SLL GLL+ N Sbjct: 377 GFQEVMSLMLTSEESHYQKMRLEEDER-VQVAQPISQDRTMIRKSLLNGLLEFLEDNRHE 435 Query: 563 AIADFAIFEVSHVYENDTPEGQ------KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 + IFEV V D P+ + K +A I S+G Sbjct: 436 DLPQ-RIFEVGDVVYID-PKAETRTRTVKKLACAITHSSAG------------------- 474 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEI--VLGYFGEF 670 + K+ A +V+E +L +E HP GR I++ E + G+FGE Sbjct: 475 -FTEIKSIAAAVVE------NLGYEFRVEPLDHPSFIRGRCASIESEGESSRIRGFFGEV 527 Query: 671 HPNILDFFGLSNPICGFEVYLDS 693 HP ++ F L P+ E+ + Sbjct: 528 HPEVVTNFNLEYPVIALEIEFEE 550 >gi|71902765|ref|YP_279568.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS6180] gi|71801860|gb|AAX71213.1| tRNA binding domain protein [Streptococcus pyogenes MGAS6180] Length = 208 Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL+L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELVLPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|311273126|ref|XP_003133727.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain-like [Sus scrofa] Length = 409 Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 77/338 (22%), Positives = 125/338 (36%), Gaps = 70/338 (20%) Query: 281 ACSGEKILALDNQ--EYDLSPDN-----VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 AC I DNQ Y +N V+ S+G + S+ II G H+ NT +V + Sbjct: 66 ACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGNHSKITVNTRNVFI 125 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 E G D VL IV++ C Sbjct: 126 ECT--------------------------GTDFTKAKIVLDTIVTMFSEYCDN------- 152 Query: 394 ARNITYKPRKIVFMNSEVKRLS------------------GIDVPIEDSLRILERLGFS- 434 T + ++VF N ++ GI E+ ++L R+ Sbjct: 153 --QFTVEAAEVVFPNGKLHTFPELAYRKEIVRADLINKKIGIRETPENLAKLLTRMCLKS 210 Query: 435 -VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 VIG+ + E+ VP R D+ D++E+ YG + I+ + L + N Sbjct: 211 EVIGDGHQIEIEVPPTRADIIHACDIIEDAAIAYGYNNIQ---MTLPKTYTIANQFPLNK 267 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQRELEILNPISADMSNMRTSLL 549 T ++ +A+ E + ++ S+E L + + I NP +A+ RT+LL Sbjct: 268 FTELLRHDMAAAGFTEALTFALCSQEDIADKLGLDISATKAVHISNPKTAEFQVARTTLL 327 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 PGLLK N + +FE+S V D+ G + Sbjct: 328 PGLLKTIAANRKMPLP-LKLFEISDVVIKDSSRGPAFF 364 >gi|224122624|ref|XP_002330528.1| predicted protein [Populus trichocarpa] gi|222872462|gb|EEF09593.1| predicted protein [Populus trichocarpa] Length = 595 Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/264 (26%), Positives = 107/264 (40%), Gaps = 53/264 (20%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKS------EPLPLTQVEDKRNLSLQQSRTRY 497 V +P R DV D++E++ YG + I +PLPL Q+ED Sbjct: 356 VLIPPTRSDVLHPCDVMEDVAIAYGYNDIPKRRLPSMKPLPLNQLED------------L 403 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE------LEILNPISADMSNMRTSLLPG 551 ++ +A EV+ W S ++ F RE + I NP S+D +RTSL+PG Sbjct: 404 IRAEIAMNGFTEVLTWILCSYREN--FASLNREDDQSSAVIIGNPRSSDFEVVRTSLMPG 461 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLWS 606 LK G N D IFEV + D + ++++AA +SG E L Sbjct: 462 ALKIIGHNKDHP-KPIKIFEVGDIALLDESKDVGATNRRHLAALYCGTNSGFELIHSLVD 520 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSL---DSLRFESGAPSWYHPGRSGIIKTSAEIV 663 R +++ PFV + E + PGR I + Sbjct: 521 -------RIMEVMGT---------PFVPIGDNTGYYIERSNEPEFLPGRQASIIYKGK-H 563 Query: 664 LGYFGEFHPNILDFFGLSNPICGF 687 G FG HP +L+ F +++P C F Sbjct: 564 FGNFGIVHPQVLNNFVITDP-CSF 586 >gi|157279951|ref|NP_001098491.1| phenylalanyl-tRNA synthetase, beta subunit [Bos taurus] gi|154425714|gb|AAI51419.1| FARSB protein [Bos taurus] gi|296490213|gb|DAA32326.1| phenylalanyl-tRNA synthetase, beta subunit [Bos taurus] Length = 589 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 93/439 (21%), Positives = 163/439 (37%), Gaps = 73/439 (16%) Query: 281 ACSGEKILALDNQ--EYDLSPDN-----VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 AC I DNQ Y +N V+ S G + S+ II G H+ NT +V + Sbjct: 194 ACELMNIYKTDNQLKHYLHIIENKPLYPVIYDSKGVVLSMPPIINGNHSKITVNTKNVFI 253 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGT----AS 389 E G D VL IV+ C A+ Sbjct: 254 ECT--------------------------GTDFTKAKIVLDVIVTTFSEYCENQFTVEAA 287 Query: 390 DICIARNITYKPRKIVFMNSEVK-----RLSGIDVPIEDSLRILERLGFS--VIGEYDKF 442 ++ + ++ + V+ + GI E+ ++L R+ VIG+ ++ Sbjct: 288 EVVFPNGKLHTFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMCLKSEVIGDGNQI 347 Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 EV +P R D+ D++E+ YG + I+ + L + N T +++ + Sbjct: 348 EVEIPPTRADIIHACDIIEDAAIAYGYNNIQ---MTLPKTYTIANQFPLNKLTELLRQDM 404 Query: 503 ASRAMMEVVNWSFISKEQSVLFGG----GQRELEILNPISADMSNMRTSLLPGLLKATGR 558 A+ E + ++ S+E G + + I NP +A+ RT+LLPGLLK Sbjct: 405 AAAGFTEALTFALCSQEDIADKLGMDISATKAVHISNPKTAEFQVARTTLLPGLLKTLAA 464 Query: 559 NVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 N + +FE+S + D+ +++ A + G E L Sbjct: 465 NRKMPLP-LKLFEISDIVIKDSSRDVGARNYRHLCAVYYNKNPGFEIIHGLLD------- 516 Query: 614 RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 R + L D + P ++ + PGR I + + G G HP+ Sbjct: 517 RIMQLLD--------VPPGEKKGGYAIKASEGPVFFPGRCAEIFARGQSI-GKLGVLHPD 567 Query: 674 ILDFFGLSNPICGFEVYLD 692 ++ F L+ P E+ ++ Sbjct: 568 VITKFELTMPCSCVEINIE 586 >gi|75054856|sp|Q5R7F7|SYFB_PONAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|55731178|emb|CAH92303.1| hypothetical protein [Pongo abelii] Length = 589 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 85/408 (20%), Positives = 159/408 (38%), Gaps = 66/408 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSRITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYS 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----P 581 + + I +P +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISSPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGA 491 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFE 641 + +++ A + G E L + + +D+ + VI+ Sbjct: 492 KNYRHLCAVYYNKNPGFEIIHGLL----DRIMQLLDVLPGEDKGGYVIK----------A 537 Query: 642 SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 S P+++ PGR I + V G G HP+++ F L+ P E+ Sbjct: 538 SEGPAFF-PGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 583 >gi|288932479|ref|YP_003436539.1| phenylalanyl-tRNA synthetase subunit beta [Ferroglobus placidus DSM 10642] gi|288894727|gb|ADC66264.1| phenylalanyl-tRNA synthetase, beta subunit [Ferroglobus placidus DSM 10642] Length = 547 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 118/566 (20%), Positives = 220/566 (38%), Gaps = 94/566 (16%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCK- 215 +DV PNR D V G+A L G ++ I +S + + + D S+ K Sbjct: 41 VDVEFFPNRPDLYSVEGVARAL--KGFMDIEFGYIDYKVSKGNWKIYV-----DESVLKV 93 Query: 216 --GFAMCCVKGVR-------------NNVAPNWMRQRLK-AVGLRSISALVDITNYVSLD 259 C V+ +R ++ R R K A+G+ + + Y ++ Sbjct: 94 RPRIVGCVVRNIRIDDRVLRSMIEVQEDLHWTIGRNRRKMAIGIHDLDKISFPLKYTAVS 153 Query: 260 RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 + D V + + ++ + P ++I S G S II Sbjct: 154 EDFSFVPLDFEEEMSVREILEKHPKGREYGFILEKAEAYP--MIIDSKGNAISFPPIINA 211 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 + + TT++ ++V +D N+ ++ + L + +RG L+ V + Sbjct: 212 EMTRVTEKTTNLFIDVTGFDE-NVDKALRILAAMFA-----DRGGKLES--------VEI 257 Query: 380 ILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL--GFSVIG 437 I D+ P + SE+ L G + E+ L R+ GF + G Sbjct: 258 IYPNKREETPDMS--------PMVLEVKKSEIYSLLGFKLSDEEIKLALGRMRYGFEIGG 309 Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV-EDKRNLSLQQSRTR 496 E K V VP +R D+ + D++E+I YG D+I+ P + + L+ Sbjct: 310 EVIK--VFVPPYRADIMHEWDIIEDIAIGYGYDRIQPTYPPTPGIGREHEWFKLKD---- 363 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPG 551 V+ ++ EV+ ++ ++ F + E + +++P++ + + +RT +LP Sbjct: 364 LVREIMIGLGFTEVITFTLTNERAQYEFMRRKAEPWKDFVPVMHPLTEEHTIIRTDILPK 423 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 LL+ N A+ +FEV V N ++ RL + + Sbjct: 424 LLEVLANNKHHAMPQ-KVFEVGDVVVN-------------------LKNRLRLAACVTHA 463 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRF---ESGAPSWYHPGRSGIIKTSAEIVLGYFG 668 + F ++ S ++ + L + ES ++ R+ II +I G FG Sbjct: 464 KANF-------SEIRSYVQALMRELDLEWDVKESDDEAFIKGRRADIIVRGKKI--GVFG 514 Query: 669 EFHPNILDFFGLSNPICGFEVYLDSI 694 E HP +L+ F L+NP+ FE+ L I Sbjct: 515 EIHPEVLEKFDLTNPVAAFEIDLSEI 540 >gi|305662966|ref|YP_003859254.1| phenylalanyl-tRNA synthetase, beta subunit [Ignisphaera aggregans DSM 17230] gi|304377535|gb|ADM27374.1| phenylalanyl-tRNA synthetase, beta subunit [Ignisphaera aggregans DSM 17230] Length = 553 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 38/276 (13%) Query: 428 LERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK 485 L R+G+ ++ + D+ +V VP +R D+ + D+VE+I G D + E +P + Sbjct: 300 LTRMGY-IVEKIDETSIDVLVPPYRADILHQVDIVEDIAIGIGYDALGIEAIPPVY---R 355 Query: 486 RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMR 545 + + + V+ VL E+ + + + L G+ L I+NPIS+++ +R Sbjct: 356 YGVDRYRVVSNIVRDVLIGLGYTEINTLTILPSKILDLIQQGEY-LRIVNPISSEIDAIR 414 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLW 605 S++ +L R IFEV V + +E R W Sbjct: 415 NSMVASILLVL-RESQHTPLPIKIFEVGEVV------------------TKCLECYNR-W 454 Query: 606 SDKSEERCRFVDLFDAK-------ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 ++E RC F L D++ AD +V+ ++ S + Y GR G I+ Sbjct: 455 --RNEFRCVFA-LMDSEIRFEEIHADLFAVLRELGIERNISIHSCSNPIYISGRCGCIEM 511 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + V+G FGE +P IL+ G+ PI E+YL+ I Sbjct: 512 NNR-VIGVFGEVNPEILEKLGIEYPIAIVELYLEPI 546 >gi|319937381|ref|ZP_08011788.1| tRNA-binding protein [Coprobacillus sp. 29_1] gi|319807747|gb|EFW04340.1| tRNA-binding protein [Coprobacillus sp. 29_1] Length = 200 Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 3/86 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +V+ +E +PD D I ++DTG + +Q+VCGAPNV + L V A + +P + + Sbjct: 94 FRVGRVIQIEEHPDSDHMHICQVDTGD-ETLQIVCGAPNVALNQLVVVAKNDAVMP-SGL 151 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I+ +RG+ES GM+CS KEL L + Sbjct: 152 IIKPSSLRGVESHGMLCSAKELALPN 177 >gi|289167278|ref|YP_003445545.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis B6] gi|288906843|emb|CBJ21677.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus mitis B6] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 75/133 (56%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L + G + V+++E F + +++ + +PD D I ++ ++ Sbjct: 68 TDEQVARLNQELQAEGFTEKIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASNKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN R+GL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARLGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|149003569|ref|ZP_01828434.1| hypothetical protein CGSSp14BS69_13063 [Streptococcus pneumoniae SP14-BS69] gi|147758301|gb|EDK65301.1| hypothetical protein CGSSp14BS69_13063 [Streptococcus pneumoniae SP14-BS69] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|149012503|ref|ZP_01833534.1| hypothetical protein CGSSp19BS75_01041 [Streptococcus pneumoniae SP19-BS75] gi|147763559|gb|EDK70495.1| hypothetical protein CGSSp19BS75_01041 [Streptococcus pneumoniae SP19-BS75] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|50913496|ref|YP_059468.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS10394] gi|94989612|ref|YP_597712.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS10270] gi|139472979|ref|YP_001127694.1| tRNA-binding protein [Streptococcus pyogenes str. Manfredo] gi|306828204|ref|ZP_07461465.1| tRNA binding domain protein [Streptococcus pyogenes ATCC 10782] gi|50902570|gb|AAT86285.1| tRNA binding domain protein [Streptococcus pyogenes MGAS10394] gi|94543120|gb|ABF33168.1| tRNA binding domain protein [Streptococcus pyogenes MGAS10270] gi|134271225|emb|CAM29441.1| putative tRNA-binding protein [Streptococcus pyogenes str. Manfredo] gi|304429582|gb|EFM32630.1| tRNA binding domain protein [Streptococcus pyogenes ATCC 10782] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|209558680|ref|YP_002285152.1| tRNA binding domain protein [Streptococcus pyogenes NZ131] gi|209539881|gb|ACI60457.1| tRNA binding domain protein [Streptococcus pyogenes NZ131] Length = 214 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMLAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|194397919|ref|YP_002038504.1| hypothetical protein SPG_1822 [Streptococcus pneumoniae G54] gi|194357586|gb|ACF56034.1| conserved hypothetical protein [Streptococcus pneumoniae G54] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|56807744|ref|ZP_00365607.1| COG0073: EMAP domain [Streptococcus pyogenes M49 591] Length = 214 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMLAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|168494754|ref|ZP_02718897.1| emap domain protein [Streptococcus pneumoniae CDC3059-06] gi|169833001|ref|YP_001695272.1| hypothetical protein SPH_2054 [Streptococcus pneumoniae Hungary19A-6] gi|168995503|gb|ACA36115.1| conserved hypothetical protein [Streptococcus pneumoniae Hungary19A-6] gi|183575367|gb|EDT95895.1| emap domain protein [Streptococcus pneumoniae CDC3059-06] Length = 209 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 69 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 126 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 127 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 185 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 186 RGVLELSEDQVVG 198 >gi|322410948|gb|EFY01856.1| putative tRNA-binding protein [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 9/121 (7%) Query: 31 EVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRV 84 E+ K E L P F + +++ + +PD D I ++ G++Q +Q+V GAPN + Sbjct: 78 ELAKEGFSERLEPTAGPVFVVGQIVEMMAHPDSDHLNICQVAIGENQTVQIVAGAPNAAL 137 Query: 85 GLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPV 142 GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+EL A V Sbjct: 138 GLKTIVALPGAMMPSGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGIIELDESAVV 196 Query: 143 G 143 G Sbjct: 197 G 197 >gi|149007391|ref|ZP_01831034.1| hypothetical protein CGSSp18BS74_06247 [Streptococcus pneumoniae SP18-BS74] gi|147760963|gb|EDK67932.1| hypothetical protein CGSSp18BS74_06247 [Streptococcus pneumoniae SP18-BS74] gi|332071898|gb|EGI82386.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA17545] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|19745295|ref|NP_606431.1| hypothetical protein spyM18_0119 [Streptococcus pyogenes MGAS8232] gi|21909628|ref|NP_663896.1| hypothetical protein SpyM3_0092 [Streptococcus pyogenes MGAS315] gi|28895006|ref|NP_801356.1| hypothetical protein SPs0094 [Streptococcus pyogenes SSI-1] gi|19747393|gb|AAL96930.1| hypothetical protein spyM18_0119 [Streptococcus pyogenes MGAS8232] gi|21903810|gb|AAM78699.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315] gi|28810251|dbj|BAC63189.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPIVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|68073619|ref|XP_678724.1| phenylalanine--tRNA ligase [Plasmodium berghei strain ANKA] gi|56499283|emb|CAH96976.1| phenylalanine--tRNA ligase, putative [Plasmodium berghei] Length = 610 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 77/320 (24%), Positives = 143/320 (44%), Gaps = 46/320 (14%) Query: 398 TYKPRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVE 454 +K +K+ V++LSGI D+ I++ ++L+++ SV + FEV+VP +R D+ Sbjct: 301 NFKNKKLTCDIEYVRKLSGIKDITIDNVKKLLKKMMISVTNVINNTIFEVNVPFYRSDIM 360 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLS--LQQSRTRYVKRVLASRAMMEVV- 511 D+VE+I YG D IK EP+ +++ +S + S T + + A++ + Sbjct: 361 HACDIVEDIAIAYGYDNIKYEPIEISKKHLLNTISDMFRNSMTECSYTEVITNALLSLKE 420 Query: 512 NWSFISKEQSVL-----------FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNV 560 N+ ++ ++ + ++I+N +++ +RTSL+ LLK N Sbjct: 421 NYDYMLRKHISYDTPFDNKFVDSYNPLYPPVQIMNSKTSEYEIVRTSLIVNLLKFVAANK 480 Query: 561 DRAIA--DFAIFEVSHVYEN--DTPEGQK-----YMAAGIRKGSSGIEG-------SGRL 604 R + F I ++S+ N DT K A + G I G +L Sbjct: 481 HRELPLRFFEIGDISYTIYNKTDTNAFNKRNLSIIFADKVTAGLEEIHGVLESILKDFQL 540 Query: 605 WSD-KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV 663 +S K EE+ + + + ++D V VS++ PS+ I+ + Sbjct: 541 FSHYKIEEKRK--EKIEIRSD---VYYELVSIND-------PSFLDERVVNIVLQPQNLT 588 Query: 664 LGYFGEFHPNILDFFGLSNP 683 G G HPN+L+ F ++ P Sbjct: 589 FGIMGVIHPNVLENFSINIP 608 >gi|225857498|ref|YP_002739009.1| putative tRNA binding domain protein [Streptococcus pneumoniae P1031] gi|225724421|gb|ACO20273.1| putative tRNA binding domain protein [Streptococcus pneumoniae P1031] gi|301794869|emb|CBW37328.1| putative tRNA-binding protein [Streptococcus pneumoniae INV104] gi|332199935|gb|EGJ14009.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA47901] Length = 208 Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|15903768|ref|NP_359318.1| hypothetical protein spr1726 [Streptococcus pneumoniae R6] gi|116515611|ref|YP_817139.1| hypothetical protein SPD_1713 [Streptococcus pneumoniae D39] gi|149023440|ref|ZP_01836029.1| hypothetical protein CGSSp23BS72_10103 [Streptococcus pneumoniae SP23-BS72] gi|168484919|ref|ZP_02709864.1| emap domain protein [Streptococcus pneumoniae CDC1873-00] gi|182684855|ref|YP_001836602.1| hypothetical protein SPCG_1885 [Streptococcus pneumoniae CGSP14] gi|225859676|ref|YP_002741186.1| Putative tRNA binding domain protein [Streptococcus pneumoniae 70585] gi|225861703|ref|YP_002743212.1| putative tRNA binding domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298229954|ref|ZP_06963635.1| putative tRNA binding domain protein [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255177|ref|ZP_06978763.1| putative tRNA binding domain protein [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503647|ref|YP_003725587.1| phenylalanine--tRNA ligase subunit beta [Streptococcus pneumoniae TCH8431/19A] gi|303253873|ref|ZP_07339996.1| hypothetical protein CGSSpBS455_00250 [Streptococcus pneumoniae BS455] gi|303260702|ref|ZP_07346663.1| hypothetical protein CGSSp9vBS293_00025 [Streptococcus pneumoniae SP-BS293] gi|303262436|ref|ZP_07348378.1| hypothetical protein CGSSp14BS292_11477 [Streptococcus pneumoniae SP14-BS292] gi|303265369|ref|ZP_07351277.1| hypothetical protein CGSSpBS397_06974 [Streptococcus pneumoniae BS397] gi|303267425|ref|ZP_07353280.1| hypothetical protein CGSSpBS457_08994 [Streptococcus pneumoniae BS457] gi|303269671|ref|ZP_07355428.1| hypothetical protein CGSSpBS458_09011 [Streptococcus pneumoniae BS458] gi|307128111|ref|YP_003880142.1| tRNA binding domain-containing protein [Streptococcus pneumoniae 670-6B] gi|15459405|gb|AAL00529.1| Conserved hypothetical protein [Streptococcus pneumoniae R6] gi|116076187|gb|ABJ53907.1| conserved hypothetical protein [Streptococcus pneumoniae D39] gi|147929763|gb|EDK80753.1| hypothetical protein CGSSp23BS72_10103 [Streptococcus pneumoniae SP23-BS72] gi|172041929|gb|EDT49975.1| emap domain protein [Streptococcus pneumoniae CDC1873-00] gi|182630189|gb|ACB91137.1| hypothetical protein SPCG_1885 [Streptococcus pneumoniae CGSP14] gi|225721358|gb|ACO17212.1| Putative tRNA binding domain protein [Streptococcus pneumoniae 70585] gi|225726947|gb|ACO22798.1| putative tRNA binding domain protein [Streptococcus pneumoniae Taiwan19F-14] gi|298239242|gb|ADI70373.1| phenylalanine--tRNA ligase beta subunit [Streptococcus pneumoniae TCH8431/19A] gi|301802603|emb|CBW35365.1| putative tRNA-binding protein [Streptococcus pneumoniae INV200] gi|302599152|gb|EFL66175.1| hypothetical protein CGSSpBS455_00250 [Streptococcus pneumoniae BS455] gi|302636336|gb|EFL66829.1| hypothetical protein CGSSp14BS292_11477 [Streptococcus pneumoniae SP14-BS292] gi|302638146|gb|EFL68620.1| hypothetical protein CGSSpBS293_00025 [Streptococcus pneumoniae SP-BS293] gi|302640811|gb|EFL71201.1| hypothetical protein CGSSpBS458_09011 [Streptococcus pneumoniae BS458] gi|302643054|gb|EFL73346.1| hypothetical protein CGSSpBS457_08994 [Streptococcus pneumoniae BS457] gi|302645086|gb|EFL75325.1| hypothetical protein CGSSpBS397_06974 [Streptococcus pneumoniae BS397] gi|306485173|gb|ADM92042.1| tRNA binding domain protein [Streptococcus pneumoniae 670-6B] gi|327389074|gb|EGE87420.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA04375] gi|332072098|gb|EGI82584.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA41301] gi|332199334|gb|EGJ13411.1| putative tRNA binding domain protein [Streptococcus pneumoniae GA47368] Length = 208 Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|300214311|gb|ADJ78727.1| tRNA binding domain protein [Lactobacillus salivarius CECT 5713] Length = 216 Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 46/128 (35%), Positives = 71/128 (55%), Gaps = 7/128 (5%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR---EALSPFTIVKVLSVERNPDLD-C 60 L+ L+ H + ++ E++ D L + LE D +A S F + V S++ +PD D Sbjct: 57 LADLQGHGEEQLNQEQV-DKLNKL-LEENDFDPELILDANSKFVVGYVESMKEHPDSDHL 114 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 I ++ QE+Q+VCGAPN+ G V A G+ +P MI K+RG+ES GM+CS Sbjct: 115 HITKVKVDNDQELQIVCGAPNIDEGQKVVVAKVGAMMPNGAMIF-PGKLRGVESMGMICS 173 Query: 121 EKELMLSD 128 +EL L + Sbjct: 174 ARELELPN 181 >gi|222831885|gb|EEE70362.1| predicted protein [Populus trichocarpa] Length = 141 Score = 64.7 bits (156), Expect = 6e-08, Method: Composition-based stats. Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 14/121 (11%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV---KVLSVERNPD 57 M+F SWL++ + ++ +++ DTLT GLEVE+++ PFT + ++ + E++P+ Sbjct: 1 MQFPESWLREFCNPPLTTQELADTLTMAGLEVEELE--PVAPPFTKIVVGEIKAAEQHPN 58 Query: 58 LD-CAILRIDTGKHQEIQVVCGAPNVRVGL------LGVWAPPGSCIPENNMIVNVRKIR 110 D + ++D G + + +VCGAPN RVG+ +G PPG ++ + K+R Sbjct: 59 ADRLRVCQVDVGGPELLTIVCGAPNARVGIRVPCATVGAELPPGE--DGKPFLIKIGKLR 116 Query: 111 G 111 G Sbjct: 117 G 117 >gi|224123942|ref|XP_002319202.1| predicted protein [Populus trichocarpa] gi|222857578|gb|EEE95125.1| predicted protein [Populus trichocarpa] Length = 598 Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 76/269 (28%), Positives = 113/269 (42%), Gaps = 56/269 (20%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKS------EPLPLTQVEDKRNLSLQQSRTRY 497 VSVP R D+ D++E++ YG + I +PLPL Q+ED Sbjct: 357 VSVPPTRSDILHPCDVMEDVAIAYGYNDIPKRRLPSMKPLPLNQLED------------L 404 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE------LEILNPISADMS--NMRTSLL 549 ++ +A EV+ W S ++ F RE + I NP S+D +RTSL+ Sbjct: 405 IRAEIAMNGFTEVLTWILCSNREN--FALLNREDDQSSAVIIGNPRSSDFEVCAVRTSLM 462 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRL 604 PG LK G N D IFEV V D + ++++AA +SG E Sbjct: 463 PGALKIIGHNKDHP-KPIKIFEVGDVAFLDESKDVGATNRRHLAALYCGTNSGFE----- 516 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSL-DSLRF---ESGAPSWYHPGRSGIIKTSA 660 L D + L PFV + D+ + S AP + PGR I Sbjct: 517 ---------LIHSLLDRIMEVLGT--PFVPIGDNTGYYIQRSDAPEFL-PGRQASIIYKG 564 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + G FG HP +L+ F +++P E+ Sbjct: 565 KHI-GDFGIVHPQVLNNFIITDPCSLLEI 592 >gi|317496142|ref|ZP_07954502.1| pheT protein [Gemella moribillum M424] gi|316913717|gb|EFV35203.1| pheT protein [Gemella moribillum M424] Length = 200 Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 77/137 (56%), Gaps = 6/137 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D E + L G++++ N + F + +VL+ E++PD D + ++ G+ + Sbjct: 64 SDEQKEILSKRLEKNGIKIDLEGNNDDY--FVVGEVLTCEKHPDADKLKVTTVNVGE-ET 120 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA- 131 +Q+VCGAPNV G V A G+ +P + +++ K+RG++S GM+CS++EL L + Sbjct: 121 LQIVCGAPNVEAGQKVVVALSGAMMP-SGLLIKPSKLRGVDSNGMLCSKRELGLPQEEVR 179 Query: 132 SIMELPIDAPVGGRLSD 148 I+ L D G +L + Sbjct: 180 GILVLDEDTKAGTKLKE 196 >gi|309799829|ref|ZP_07694036.1| tRNA binding domain protein [Streptococcus infantis SK1302] gi|308116545|gb|EFO54014.1| tRNA binding domain protein [Streptococcus infantis SK1302] Length = 208 Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L S E ++++E F + +++ + +PD D I ++ + Sbjct: 68 TDDQVARLNQELQSQDFTEEIINDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSEDQVVG 197 >gi|326508576|dbj|BAJ95810.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 594 Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 37/264 (14%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 VSVP R DV DL E++ YG + + KS+P +T + +Q R+ ++ Sbjct: 354 VSVPPTRSDVLHARDLAEDVAIAYGYNNVPKSKPKSMT-------IGGRQPLNRFSDKIR 406 Query: 503 ASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKA 555 A A MEV+ + S E++ G + + I NP +++ +R+SL+ LLK Sbjct: 407 AEVARAGYMEVLTFVLTSHEENFDMLNRTDDGNKAVIIANPRTSEFEVLRSSLMSCLLKT 466 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 N+D IFEV V DT + +AA +SG E L Sbjct: 467 LKHNIDHP-RPIKIFEVGDVVSLDTSRDVGATNNRRLAALYCNNNSGFEEIMGLVD---- 521 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 R V + AK + S P ++ + I+ TSA +GY G Sbjct: 522 ---RIVTIVSAKHIKFG--------KTYYVPSSEPEFFTKRQCKIV-TSAGKQVGYLGIV 569 Query: 671 HPNILDFFGLSNPICGFEVYLDSI 694 H +L FG+ +P E+ L+++ Sbjct: 570 HAEVLRKFGIPDPCTFVEIDLEAL 593 >gi|322377734|ref|ZP_08052224.1| tRNA binding domain protein [Streptococcus sp. M334] gi|321281499|gb|EFX58509.1| tRNA binding domain protein [Streptococcus sp. M334] Length = 208 Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQVEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN R+GL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARLGLKTIVALPGAMMPKGNLIFP-GQLRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|150402427|ref|YP_001329721.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus maripaludis C7] gi|166227808|sp|A6VGJ4|SYFB_METM7 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|150033457|gb|ABR65570.1| phenylalanyl-tRNA synthetase, beta subunit [Methanococcus maripaludis C7] Length = 554 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 74/322 (22%), Positives = 140/322 (43%), Gaps = 67/322 (20%) Query: 396 NITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEE 455 ++T K R I+ + S K+L G+++ + ++ +++ G + E V +P++R D+ Sbjct: 275 DLTLKSR-IISIESINKKL-GLELNPGEIIQAVKKSGMDALYEDGNLIVKIPAYRNDILH 332 Query: 456 KADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSF 515 DL EEI YG ++ + + L V + + + + ++ EV+N + Sbjct: 333 NVDLKEEIAINYGYEKFEGK---LPSVATTGSKDPVEKKCNAMSDLMIGLGFYEVMNLTL 389 Query: 516 ISKEQSVLFGGGQRE------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 Q LF + +E+L P S + +RTS+LP LL+ N ++ I Sbjct: 390 --SNQDTLFEKMNLKVEEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQ-KI 446 Query: 570 FEVSH---VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL 626 FE+ + ENDT +++ +C+ + K A Sbjct: 447 FEIGDCVIIDENDT---------------------------ETDTKCK-----NIKKIAG 474 Query: 627 SVIEPFVSLDSLRFESGA-----------PSWYHP----GR-SGIIKTSAEIVLGYFGEF 670 ++ P + + ++ + A ++ HP GR + IIK E+ G+FGE Sbjct: 475 AITHPLTNFNEIKSSTEALLREFFEDFEFENYEHPAFIPGRCAKIIKDGKEV--GFFGEI 532 Query: 671 HPNILDFFGLSNPICGFEVYLD 692 HP ++ F L +PI GFE+ ++ Sbjct: 533 HPEVILNFELEHPIVGFEITIE 554 >gi|71909915|ref|YP_281465.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS5005] gi|71852697|gb|AAZ50720.1| tRNA binding domain protein [Streptococcus pyogenes MGAS5005] Length = 208 Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 7/112 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 ENLARLNAELAKEGFSERLEPIVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPN 180 >gi|172058260|ref|YP_001814720.1| tRNA-binding domain-containing protein [Exiguobacterium sibiricum 255-15] gi|171990781|gb|ACB61703.1| t-RNA-binding domain protein [Exiguobacterium sibiricum 255-15] Length = 202 Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 34/86 (39%), Positives = 54/86 (62%), Gaps = 3/86 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V S E++PD D ++ +++ Q +Q+VCGAPNV G V A PG+ +P + + Sbjct: 95 FVVGFVSSAEKHPDADKLSVCQVEV-DDQTLQIVCGAPNVAAGQKVVVAKPGAVMP-SGL 152 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I+ +RG+ S+GM+CS +EL L D Sbjct: 153 IIRPSALRGVASSGMLCSARELALPD 178 >gi|297619177|ref|YP_003707282.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus voltae A3] gi|297378154|gb|ADI36309.1| phenylalanyl-tRNA synthetase, beta subunit [Methanococcus voltae A3] Length = 573 Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 120/589 (20%), Positives = 231/589 (39%), Gaps = 88/589 (14%) Query: 142 VGGRLSDYLELSD-PIIDVSLTPNRSDCIGVRGIALDL-----VAAGLGK--LKEINISC 193 +G + + E +D ++ S+ PNR D + V G+A + GL +K+ +I Sbjct: 31 MGVEVEELFEENDREMVQFSINPNRPDYLSVEGLARGFRGFMGIQTGLANYDIKDSDIEV 90 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK-AVGLRSISALVDI 252 + I F L + + + + ++ + R R K A+G+ + Sbjct: 91 IVKCSKERPYIAFALVKNVIVDDLILESIINLQEKLHWAIGRDRKKLAIGVHDYDKIEAP 150 Query: 253 TNYVSLD----RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 Y ++ + P + +A ++ + + G+K L ++ L D +G Sbjct: 151 FIYDEVEGDAVKFVPLAMAEAGEMTPKEIIEKHEKGQKYAHLIKDKFPLITD-----KNG 205 Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQG 368 + S+ II G+ NT ++L+++ +G G + ++ L Sbjct: 206 NVLSMPPIINGELTKVSTNTKNLLIDI----------TGTEKGAVENT---------LNI 246 Query: 369 MIPVLKHIVSLILSLCGGTASDICIARNITY---KPRKIVFMNSEVKRLSGIDVPIEDSL 425 + L I S+ D + TY P +I + + G+++ + Sbjct: 247 VATALAERRGTIFSVKVIYEEDGKVINEETYPKLTPEQIEIDLEFINKKLGLELNFGQVI 306 Query: 426 RILERLGFSV-----IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 L + G GE + V +P++R D+ K D+VEEI YG ++ K + + Sbjct: 307 SALRKAGLDAELINKNGE-NLLNVYIPAYRNDMLGKVDIVEEIAINYGYEKFKGAKINVH 365 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF-----------GGGQR 529 + K ++ S +K + EV+N + +K ++LF G + Sbjct: 366 TIGQKNESEVKSSE---IKNTMIGLGFQEVMNLTLTNK--TILFENMNMEVGSVEDGCKD 420 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYM 587 +E+L P S + + +RT+++P LL+ N + IFE+ + + + E KY Sbjct: 421 YIEVLKPASIEHNVIRTTIIPQLLETLKINKHNELPQ-KIFEIGDCVIIDENAKETDKYF 479 Query: 588 ---AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV--SLDSLRFES 642 +RK S I + + + R SVI+ + D+ E+ Sbjct: 480 DTKCKDVRKVSGAI-----IQPNGNFNEIR------------SVIDALLREQYDNYVIEN 522 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 A + GR I + E G FGE +P ++ F L +PI FE+ + Sbjct: 523 YAHPSFIKGRCAKILVNEE-YKGLFGEINPQVIVNFELEHPITAFEIQI 570 >gi|15218527|ref|NP_177399.1| tRNA synthetase beta subunit family protein [Arabidopsis thaliana] gi|12644590|sp|Q9SGE9|SYFB_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|12323785|gb|AAG51865.1|AC010926_28 putative phenylalanyl-tRNA synthetase beta-subunit; PheHB; 86609-90570 [Arabidopsis thaliana] gi|17065262|gb|AAL32785.1| putative phenylalanyl-tRNA synthetase beta-subunit; PheHB [Arabidopsis thaliana] gi|22136234|gb|AAM91195.1| putative phenylalanyl-tRNA synthetase beta-subunit; PheHB [Arabidopsis thaliana] gi|332197217|gb|AEE35338.1| phenylalanyl-tRNA synthetase beta chain [Arabidopsis thaliana] Length = 598 Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 113/263 (42%), Gaps = 28/263 (10%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 +V VP R DV D++E++ YG + I P + + L+L + T ++ + Sbjct: 352 KVHVPPSRSDVLHPCDVMEDVAIAYGFNNI-----PTRKPASIKPLTLNE-LTDLLRIEI 405 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATG 557 A EVV W S +++ F RE + + NP SAD MR +L+PGLLK G Sbjct: 406 AMCVYTEVVTWLLCSHKEN--FAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVG 463 Query: 558 RNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 N ++ IFE+S V D + ++++AA +SG E L E Sbjct: 464 HN-NKYPKPIKIFEISDVVMLDESKDVGASNRRHLAALYCGATSGFELIHGLVDRIMEVM 522 Query: 613 C-RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 F+ + + P D + + PGR I + + G FG H Sbjct: 523 AIPFLTIHENNV-------PINEKDGYYVKLSQEPEFLPGRQASIIVRGKHI-GNFGIVH 574 Query: 672 PNILDFFGLSNPICGFEVYLDSI 694 P +L+ F + +P E+ +++I Sbjct: 575 PEVLNNFDIPDPCSYLELDIEAI 597 >gi|315230170|ref|YP_004070606.1| phenylalanyl-tRNA synthetase subunit beta [Thermococcus barophilus MP] gi|315183198|gb|ADT83383.1| phenylalanyl-tRNA synthetase beta chain [Thermococcus barophilus MP] Length = 559 Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 88/393 (22%), Positives = 170/393 (43%), Gaps = 46/393 (11%) Query: 302 VVIASDGRIQSIAGIIGGK-HAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 ++I S+G + S+ +I + H + T ++ +++ W N+ + L ++ + Sbjct: 202 LLIDSEGNVLSMPPVINSETHGKVTEKTRNIFIDITGW---NLNKIMLALNVLVTALA-- 256 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERG ++ + V K L P++ S +K+L+GI++ Sbjct: 257 ERGGKIKSVKVVYKDFEIETPDLT----------------PKEFEVELSYIKKLAGIELS 300 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 E +LER+ + V + K ++ P++R D+ D++E++L YG + I+ E P Sbjct: 301 DEQIKELLERMFYEVDLKDGKAKLKYPAFRDDIMHARDVLEDVLIAYGYNNIEPEE-PKL 359 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGGQRELEILNPIS 538 V+ K N ++ ++ ++ + EV+ ++ +KE + + +EI NP+S Sbjct: 360 AVQGKGNDFIEFENA--IRELMIGFGLQEVMTFNLTNKEAQFTKMNIPEEEIVEIENPVS 417 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 S +R LLP L++ N IFEV G+ + R+ + Sbjct: 418 LRWSALRKWLLPSLMEFLSLNTHEEYPQ-KIFEV----------GKATLIDETRETKTVS 466 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 E +L + R F ++ + L I + + E + PGR G I Sbjct: 467 E--SKLAVVIAHPRVTFTEV----KEILDSIMHHLGFE-YELEETEHGSFIPGRVGKIVV 519 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + V G GE HP +L+ +G+ P+ FE++L Sbjct: 520 EGKEV-GIIGEIHPQVLENWGIEMPVAAFEIFL 551 >gi|145487173|ref|XP_001429592.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124396685|emb|CAK62194.1| unnamed protein product [Paramecium tetraurelia] Length = 576 Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 85/404 (21%), Positives = 168/404 (41%), Gaps = 43/404 (10%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ + R+ S+ II G+H+ T ++L+EV D R+ L + + Sbjct: 201 VIYDNKKRVCSLPPIINGEHSKMSAETKNILIEVTAIDE---QRALHTLNCLISGFAIYN 257 Query: 362 RGVDLQGMIPVL----KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 + ++++ + V K +V+ ++ + + NI Y + ++ GI Sbjct: 258 QKLNIEKVNIVYELSKKQVVTPVVD-------ERILTTNIQY-----------INKVLGI 299 Query: 418 DVPIEDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE- 475 + + + L +G + + + + VP +R D+ ++ D+ EEI Y ++I+ Sbjct: 300 HITTQQACERLSIMGIKAVAKDESVLDCLVPFYRSDILQQCDIAEEIGIAYDYNKIEFRV 359 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFG--GGQRELE 532 P T + R L + V+ +A +E +N+ +S EQ+ + Q + Sbjct: 360 PETATTGSEYRLNKL----SDMVREEVALCGFVECLNFVLMSIDEQTKMLNRPNLQNYVS 415 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 + N + ++R++L+PG+L N D + +FEVS V +GQK G + Sbjct: 416 LNNSKTPQFQSVRSTLIPGILHTLQANSDSKLP-IKLFEVSDV----CVKGQKSEKDGFQ 470 Query: 593 KGSS--GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 KG G L + S + +++ D L + D +S P ++H Sbjct: 471 KGEGQVGAHNQRNLVAIHSSSKKTELEILHGLLDQLMIKLRVKKTDYHLKQSNDPLFFHQ 530 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ I+ I G G HP +L+ F P+ E+ + I Sbjct: 531 LQAQIVYKDQTI--GGLGVVHPEVLERFDWKYPVTLLEMNIQVI 572 >gi|168492114|ref|ZP_02716257.1| emap domain protein [Streptococcus pneumoniae CDC0288-04] gi|183573664|gb|EDT94192.1| emap domain protein [Streptococcus pneumoniae CDC0288-04] Length = 208 Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPNVRVGL + A PG+ +P+ N I ++RG +S GMMCS EL L + Sbjct: 126 VQIVAGAPNVRVGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPCELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVLELSEDQVVG 197 >gi|168006676|ref|XP_001756035.1| predicted protein [Physcomitrella patens subsp. patens] gi|162692965|gb|EDQ79320.1| predicted protein [Physcomitrella patens subsp. patens] Length = 590 Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 83/314 (26%), Positives = 130/314 (41%), Gaps = 43/314 (13%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY--- 358 V+ S R+ S+ II G H+ T +V +E D + A+ N + S+Y Sbjct: 223 VIYDSKRRVLSLPPIINGAHSAISLKTKNVFIECTATD-LTKAKIVLNTMVTMFSQYSSP 281 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 +FE + PV +VS +D R R + V R G Sbjct: 282 QFE-------VEPV--EVVS----------ADGKSTRYPDLSLRTFEVDMAYVNRTIGTS 322 Query: 419 VPIEDSLRILERLG-FSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + ++ ++L ++ ++ + K VS P R DV D+ E++ YG + I + Sbjct: 323 LEAKEVSKLLNKMQLYTEVQPDSKLRVSAPPTRSDVLHACDIAEDVAIAYGYNNI-IRTV 381 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAM---MEVVNWSFISKEQSVLF----GGGQRE 530 P + + K QQ + + A AM EVV W S E++ G Sbjct: 382 PKSHTQGK-----QQPLNHFTDLIRAEVAMAGFTEVVTWILCSLEENFKMVNREDDGNTA 436 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQK 585 + I NP SAD +R+SLLPG+LK G N D A +FEVS V ++ E + Sbjct: 437 VIIGNPRSADFEAVRSSLLPGILKTMGSNKD-APRPLKLFEVSDVVRLNSKEDVGAKNSR 495 Query: 586 YMAAGIRKGSSGIE 599 ++ A +SG E Sbjct: 496 HLVAVYSNLNSGFE 509 >gi|302696391|ref|XP_003037874.1| hypothetical protein SCHCODRAFT_80236 [Schizophyllum commune H4-8] gi|300111571|gb|EFJ02972.1| hypothetical protein SCHCODRAFT_80236 [Schizophyllum commune H4-8] Length = 628 Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 130/622 (20%), Positives = 237/622 (38%), Gaps = 131/622 (21%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + + G+A L V G + + P +S + + D + + + Sbjct: 56 PQLKIEVPANRYDLLCIEGLARALRVFLGKEEPPRYKLVHPAGGDSALVTVNVDKETAKI 115 Query: 214 CKGFAMCCVKGVR-------------NNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 FA ++ V+ + + N R+R L A+G + L Y Sbjct: 116 RPYFASAILRNVKFTERSYQSFIELQDKLHQNICRRRQLVAIGTHDLDTLKGPFRY---- 171 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIA- 305 +A D+ L + + E+++ + +E L SP +I Sbjct: 172 --------EARPPKDIKFVPLNKDKEYTAEELMTVYEKEKHLAKYLPIIRDSPVYPIIYD 223 Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD--PINIARSGKNLGIITDSRYRFERG 363 ++ R+ S+ II +H+ NT +V ++V D +NI N+ S Y E Sbjct: 224 AEDRVASMPPIINSEHSKITLNTRNVFIDVTATDQTKLNIV---VNIVATMFSEYCAE-- 278 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIED 423 P V +++ G A I N+T +P S V +G+D+ Sbjct: 279 -------PYTIEPVKVVMP--DGKAH---IFPNLTERPTSA--HASYVNSCTGLDLNAPQ 324 Query: 424 SLRILERLG-FSVIGEYDKFEV--SVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 +L+++ + + E + EV ++P R D+ + D++E+ YG + + Sbjct: 325 VAYLLKKMSLYPTLSENNPDEVLLNIPVTRPDILHECDVMEDAAIAYGFNNLPHKFPRTS 384 Query: 474 --SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGG 527 ++PL + ++ D ++R A +E + S E++ + G Sbjct: 385 TVAQPLAIGKLSD------------VIRREWALAGWVEALPLILCSHEENFEWLNREDDG 432 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + ++I NP S + +RT+LLPGLLK N A+ IFE S V DT ++ Sbjct: 433 KTAVKIANPKSIEFQVVRTTLLPGLLKTIRENRSHALP-IHIFEASDVVFKDT--SRERQ 489 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG---- 643 A R ++ +W +K+ L D L V P +S + E+G Sbjct: 490 ARNERHAAA-------VWCNKTAGFEMVHGLLDRAMRMLEV--PRISSTDFKAETGYYIK 540 Query: 644 --APSWYHPGRSGII-----------------------KTSAEIVLGYFGEFHPNILDFF 678 + Y PGR I T ++++G G HP++L+ F Sbjct: 541 ESSDPAYFPGRCATIHYRPAPVKHTKLSELKEDIKATLHTKKDLIIGELGVLHPSVLEKF 600 Query: 679 GLSNPICGFEVYLDSIPISQKK 700 + P E L+ +K Sbjct: 601 EIGFPCSAVEFSLEPFKKQMQK 622 >gi|167044025|gb|ABZ08710.1| putative tRNA synthetase B5 domain protein [uncultured marine crenarchaeote HF4000_APKG4H17] Length = 547 Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 74/342 (21%), Positives = 147/342 (42%), Gaps = 39/342 (11%) Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIA--RNIT--YKPRKIVFMNSEVKRLSGID 418 G+D Q +L +V +IL G S + ++ +N T + R I F V ++ G++ Sbjct: 232 GIDKQSAEDMLS-VVVVILQGAGFQFSQLKVSGSKNSTPNFASRSITFDTEPVNKILGLN 290 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + L L++ + + K + ++P +R D+ D+VEE+ YG+D +K Sbjct: 291 ISGSMLLSCLKKCRLDAVMKGKKIQCTIPRYRFDIFGGMDIVEEVALGYGIDNLKPAWPA 350 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEIL 534 + +K ++ + + R++ ME +N + S++ +L+ R+ + + Sbjct: 351 SVHIGEK---NMTSEKLDSISRLMTGFGFMETLNSTLTSEQ--ILYEMANRDSSQIISVT 405 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI--R 592 + S + + +R S+LPGLL+ +N+ QK+ +GI Sbjct: 406 SSKSQEHTILRDSILPGLLENLSKNIHETYP------------------QKFFESGIVFS 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGR 652 KG+ I+ + L + E F ++ KA S++ ++ + GR Sbjct: 448 KGAP-IKETSSLACVTASEETHFSEM---KAVLQSLLRIGFNIKCETKTLPNHVLFSQGR 503 Query: 653 SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 I + + V GY GE +L+ F + + GFE+ L + Sbjct: 504 VAEIVVNKKTV-GYIGELDSKVLENFRIRTKVVGFEIKLSGL 544 >gi|167756921|ref|ZP_02429048.1| hypothetical protein CLORAM_02470 [Clostridium ramosum DSM 1402] gi|237734625|ref|ZP_04565106.1| tRNA-binding protein [Mollicutes bacterium D7] gi|167703096|gb|EDS17675.1| hypothetical protein CLORAM_02470 [Clostridium ramosum DSM 1402] gi|229382445|gb|EEO32536.1| tRNA-binding protein [Coprobacillus sp. D7] Length = 199 Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 6/116 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D +EK + LT+ GL+ +D F + +V ++E +PD D I ++D K+ Sbjct: 67 SDNQIEKFNELLTTHGLDPVVLDKEPR---FIVGEVTAMEEHPDSDHLHICQVDL-KNTT 122 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 Q+VCGAPNV VG V A G+ +P + +++ K+R I+S GM+CS +EL L + Sbjct: 123 TQIVCGAPNVEVGQRVVVATIGAVMP-SGLVIKPSKLRKIDSNGMICSARELGLPN 177 >gi|154301904|ref|XP_001551363.1| hypothetical protein BC1G_10189 [Botryotinia fuckeliana B05.10] gi|150855581|gb|EDN30773.1| hypothetical protein BC1G_10189 [Botryotinia fuckeliana B05.10] Length = 609 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 94/417 (22%), Positives = 168/417 (40%), Gaps = 52/417 (12%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+ + S+ II G H+ NT +V +E+ D + N+ + S+Y E Sbjct: 216 VIYDSNRTVMSMPPIINGDHSKITLNTKNVFIEMTGTDRTKLEIVN-NIIVSMFSQYCAE 274 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P V +I T + ++ PR+ + G+ Sbjct: 275 ---------PFTIEPVEIISEHNQETRTTPNLS------PRETEAEVDYINNCCGLSESP 319 Query: 422 EDSLRILERLGFSV-IGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 E +L+++ S DK +VS+P R DV + D++E++ YG + + Sbjct: 320 EKICELLKKMCLSAKPSSKDKNLLDVSIPPTRADVLHQCDIMEDVAIAYGFNNLPRTSPN 379 Query: 474 -----SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + + + +L S N+++++++ G Sbjct: 380 KASTIAQPLPINKLGDIVRTETAMAGWSEVMPLILCSHDE----NFAWLNRKDD-----G 430 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 + + NP +A+ +RTSLLPGLLK N ++ +FEVS V D Sbjct: 431 TTAVRLANPKTAEYQVVRTSLLPGLLKTIRENKKHSLP-LKVFEVSDVAFKDLSLERKSR 489 Query: 583 GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSL 638 +++ AA +SG E G L + F+ + + K ++ E D Sbjct: 490 NERHFAAAWYGKTSGFEVVHGLLDRILLMLQTAFITHEEGLEGKKQDFAIKENPTKPDGY 549 Query: 639 RFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E + G + I E+ +G FG HP +LD F L P+ E+ L+ Sbjct: 550 WIEEIDEPTFFAGHAAAIYLRLGGKEMRVGEFGILHPTVLDKFELRYPVSTLEINLE 606 >gi|307710380|ref|ZP_07646820.1| putative tRNA binding domain protein [Streptococcus mitis SK564] gi|307618857|gb|EFN97993.1| putative tRNA binding domain protein [Streptococcus mitis SK564] Length = 208 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + E V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEDFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|315222096|ref|ZP_07864006.1| tRNA binding domain protein [Streptococcus anginosus F0211] gi|315188846|gb|EFU22551.1| tRNA binding domain protein [Streptococcus anginosus F0211] Length = 208 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 67/117 (57%), Gaps = 6/117 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 TD + + L+ G E E V++ L P F + +++ + +PD D I ++ + Sbjct: 68 TDEEISILNQELSQAGFEPELVND---LDPKFVVGEIMEMVAHPDSDHLNICQVKVAADK 124 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 125 VVQIVAGAPNAKVGLKTIVALPGAMMPKGNVIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|312078603|ref|XP_003141810.1| hypothetical protein LOAG_06226 [Loa loa] gi|307763024|gb|EFO22258.1| hypothetical protein LOAG_06226 [Loa loa] Length = 602 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 97/414 (23%), Positives = 167/414 (40%), Gaps = 62/414 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ +G + S+ II G+H+ +T ++LVEV D + A+ N + S+Y + Sbjct: 225 VIRDKNGIVLSMPPIINGEHSKIQLSTRNILVEVTATD-LEKAKIVLNTIVSMFSQYTSD 283 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 D + ++S+ GT + + R +V + R G+++ Sbjct: 284 GTEDDTSSLVEPVEVISV-----DGTKHEYPDLSD-----RSMVVSVKSINRRIGLNLEA 333 Query: 422 EDSLRILERLGF-----SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS-- 474 + +L ++ S D EV VP R DV + D+ E++ YG ++I+ Sbjct: 334 AEMCSLLNKMSLRTQLHSEEESQDLLEVRVPVTRTDVLHECDVAEDVAIAYGFNRIEQKF 393 Query: 475 -------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVLF-- 524 E PL ++ D ++ +A+ E +N++ S++ SV Sbjct: 394 PEAYTTGEAFPLNKLTD------------LLRYDIAAAGWTETLNFALCSRDDISVKLRK 441 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT--- 580 + ++I NP +++ RTSLLPGLLK N D A+ +FE+ V D Sbjct: 442 PDNLKHAVKISNPKTSEFQVARTSLLPGLLKTLASNKDVALP-LRLFEIQDVVLKDLTAD 500 Query: 581 --PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 ++ + A SSG E L R + L K + D Sbjct: 501 VGARNERRLCALYCSKSSGFEIIHGLLD-------RVMQLLGVKWTRDGTGYYIAAFDD- 552 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 P+ Y GR I A I LG G HPN++ FGL+ P+ ++ ++ Sbjct: 553 ------PT-YLDGRCAEIIGPAGISLGRVGVLHPNVITAFGLTLPVSVIDISIE 599 >gi|284166879|ref|YP_003405158.1| phenylalanyl-tRNA synthetase subunit beta [Haloterrigena turkmenica DSM 5511] gi|284016534|gb|ADB62485.1| phenylalanyl-tRNA synthetase, beta subunit [Haloterrigena turkmenica DSM 5511] Length = 570 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 87/380 (22%), Positives = 156/380 (41%), Gaps = 64/380 (16%) Query: 346 SGKNLGIITDSRYRFER--GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 +G+ + TDSR F G D Q I + +IV L+ G T D+ + Y R+ Sbjct: 223 NGRRTEVSTDSRDLFVEMTGTD-QWTIDKMLNIVCYALAARGATLEDV----EVEYPDRE 277 Query: 404 IV----------FMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSW 449 IV + ++ + GI + E+ + + ER G E D ++V++P + Sbjct: 278 IVRPDLSTKTKTVAHDRIETILGIGLDPEEVIDLAERSGLEAEREEDDGNLVYDVTIPPY 337 Query: 450 RQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 R DV D+++++ R YG + ++ + V + S + R + L + Sbjct: 338 RVDVLHPLDVIDDLGRAYGFNDLEPTYPDVGTVGGRHERSRLE---RAARTQLVGLGFED 394 Query: 510 VVNWSFISKEQSV----------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 ++N+ I++E++ ++G G+ I S D + +RT +P LL RN Sbjct: 395 LLNFHMINEEENYERMDVEPDADVYGAGE-PATIKEAYSEDYTMLRTWTMPSLLMVLERN 453 Query: 560 VDRAIADFAIFEVSHVYENDTPEG-----QKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 R+ + E+ D E +++ A + +G E Sbjct: 454 THRSYPQH-LSEIGFTARVDERENTGVGENRHVGAVLASHEAGYE--------------- 497 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 DAKA ++ E F +D + P++ PGR+ + E V G GE HP + Sbjct: 498 -----DAKARLQALAENF-DVDLETPPTDHPTFI-PGRTAAVVIDGEEV-GVIGEVHPKV 549 Query: 675 LDFFGLSNPICGFEVYLDSI 694 L L P+ FE L+++ Sbjct: 550 LVEHDLEVPVAAFEFDLEAL 569 >gi|227828282|ref|YP_002830062.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus M.14.25] gi|238620474|ref|YP_002915300.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus M.16.4] gi|259511897|sp|C4KJ68|SYFB_SULIK RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|259511899|sp|C3MYY0|SYFB_SULIM RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|227460078|gb|ACP38764.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus M.14.25] gi|238381544|gb|ACR42632.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus M.16.4] gi|323478077|gb|ADX83315.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus HVE10/4] Length = 545 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 92/407 (22%), Positives = 162/407 (39%), Gaps = 75/407 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D+NT D ++V Sbjct: 191 IVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + + ++ + KI + E VK++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVLKSANFSQLSSPLFLHKIQNVREEYVKKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T ++L + R ++ + +E+ N+ I E+ LF + ++IL Sbjct: 344 SKYISTNYGSYDYMTLLE---RKIRELGIGAGYVEISNFVLIKDEK--LFSN--KYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYMAAGIR 592 NP++ + + +R SL+PGLL +N A +FE VY++ T G Sbjct: 397 NPVTDEYNAVRNSLIPGLLDFLSKN-QHAKFPIRVFETGDVVVYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAP----SW 647 ++++R + + D K + P L SL E + Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + GRS I E +G GE +P++L FG+ P E+Y+ I Sbjct: 492 FIEGRSASIFYENE-KMGVIGEVNPDVLIRFGIEYPAVIAELYISEI 537 >gi|323475352|gb|ADX85958.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus REY15A] Length = 545 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 163/407 (40%), Gaps = 75/407 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D+NT D ++V Sbjct: 191 IVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + + ++ + KI + E VK++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVLKSANFSQLSSPLFLHKIQNVREEYVKKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T ++L + R ++ + +E+ N+ I E+ LF + ++IL Sbjct: 344 SKYISTNYGSYDYMTLLE---RKIRELGIGAGYVEISNFVLIKDEK--LFSN--KYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYMAAGIR 592 NP++ + + +R SL+PGLL +N A +FE VY++ T G Sbjct: 397 NPVTDEYNAVRNSLIPGLLDFLSKN-QHAKFPIRVFETGDVVVYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL----RFESGAPSW 647 ++++R + + D K + P L SL ++ + Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + GRS I E +G GE +P++L FG+ P E+Y+ I Sbjct: 492 FIEGRSASIFYENE-KMGVIGEVNPDVLIRFGIEYPAVIAELYISEI 537 >gi|297526570|ref|YP_003668594.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylothermus hellenicus DSM 12710] gi|297255486|gb|ADI31695.1| phenylalanyl-tRNA synthetase, beta subunit [Staphylothermus hellenicus DSM 12710] Length = 558 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 170/411 (41%), Gaps = 50/411 (12%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +++D P V+ +SDG+I S+A II + T +VL++ DP + + + Sbjct: 187 RDWDKYP--VIRSSDGKILSLAPIINSEDTRVTTYTKNVLIDSTGLDPRTVVDAVTIMAT 244 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 R ++ + + ++P D I + K I + + Sbjct: 245 SIAERSTSKKIIFVDTIMP------------------DNTILQAPRDKGPTIELHLDDAE 286 Query: 413 RLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 ++ GI + ++ + LE++G + + ++ P +R D++ D+VE+I G D Sbjct: 287 KVLGIKIDTKNIVEYLEKMGHETVEISNNNIKIVAPPYRIDIKSWIDIVEDIAMAIGYDT 346 Query: 472 I--KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-QSVLFGGGQ 528 I K++ LP R SL+ +R ++++L E+ ++ + + Q +FG Sbjct: 347 IGVKADKLP-PATHPGRMHSLEYI-SRLIRKILVGYGFTEITSYMMSNPQTQLEMFGLKD 404 Query: 529 RE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 ++ + +LNP + +R L PGLL+ N ++ + IFE+ V D P + Sbjct: 405 KKIITVLNPKMDKYTGLRRWLTPGLLEVIIENKEKQ-SSMKIFEIGDVAIPD-PNTETGA 462 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FESGAP 645 R G + G L D L+++ ++ L FE Sbjct: 463 RIERRIGIAITHGKATL------------------TDGLAIVSTLLNRLKLNPTFEKTHI 504 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 P R+ IK + E + G+ E HP+IL P+ E+ L+ + I Sbjct: 505 KGMLPERTASIKINGEEI-GFVAEIHPDILYRLDYQFPVVVSEIVLNKLLI 554 >gi|251781582|ref|YP_002995883.1| tRNA binding domain protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390210|dbj|BAH80669.1| tRNA binding domain protein [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126375|gb|ADX23672.1| putative tRNA-binding protein [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 208 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/121 (36%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 31 EVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRV 84 E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V GAPN + Sbjct: 78 ELAKEGFSERLEPTAGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIVAGAPNAAL 137 Query: 85 GLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPV 142 GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+EL A V Sbjct: 138 GLKTIVALPGAMMPSGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGIIELDESAVV 196 Query: 143 G 143 G Sbjct: 197 G 197 >gi|228993433|ref|ZP_04153343.1| hypothetical protein bpmyx0001_41600 [Bacillus pseudomycoides DSM 12442] gi|228999472|ref|ZP_04159050.1| hypothetical protein bmyco0003_40270 [Bacillus mycoides Rock3-17] gi|229007028|ref|ZP_04164655.1| hypothetical protein bmyco0002_39280 [Bacillus mycoides Rock1-4] gi|228754177|gb|EEM03595.1| hypothetical protein bmyco0002_39280 [Bacillus mycoides Rock1-4] gi|228760183|gb|EEM09151.1| hypothetical protein bmyco0003_40270 [Bacillus mycoides Rock3-17] gi|228766255|gb|EEM14899.1| hypothetical protein bpmyx0001_41600 [Bacillus pseudomycoides DSM 12442] Length = 201 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI D L G E EKV+ L+P F + V E++P+ D I +++ G +Q+ Sbjct: 72 VEKINDILAKNGFE-EKVEAD--LTPKFVVGYVAEKEKHPNADKLNICKVEIGTDT-LQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|134045381|ref|YP_001096867.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus maripaludis C5] gi|166227807|sp|A4FWS3|SYFB_METM5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|132663006|gb|ABO34652.1| phenylalanyl-tRNA synthetase beta subunit [Methanococcus maripaludis C5] Length = 554 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 67/302 (22%), Positives = 128/302 (42%), Gaps = 65/302 (21%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++ + ++ +++ G + E V +P++R D+ DL EEI YG ++ + + Sbjct: 293 GLELNPGEMIQAVKKSGMDALYEDGNLIVKIPAYRNDILHNVDLKEEIAINYGYEKFEGK 352 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----- 530 L V + + + + ++ EV+N + Q LF + Sbjct: 353 ---LPSVATTGSKDPVEKKCNAMSDLMIGLGFYEVMNLTL--SNQDTLFEKMNLKVEEKD 407 Query: 531 -LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH---VYENDTPEGQKY 586 +E+L P S + +RTS+LP LL+ N ++ IFE+ + ENDT Sbjct: 408 YIEVLKPASIEHRVLRTSILPLLLETLYINKHHSLPQ-KIFEIGDCVVIDENDT------ 460 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA-- 644 +++ +C+ + K A ++ P + + ++ + A Sbjct: 461 ---------------------ETDTKCK-----NIKKIAGAITHPLTNFNEIKSSTEALL 494 Query: 645 ---------PSWYHP----GR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 ++ HP GR + IIK E+ G+FGE HP ++ F L +PI GFE+ Sbjct: 495 REFFEDFEFENYEHPAFIPGRCAKIIKDGKEV--GFFGEIHPEVILNFELEHPIVGFEIT 552 Query: 691 LD 692 ++ Sbjct: 553 IE 554 >gi|257076637|ref|ZP_05570998.1| phenylalanyl-tRNA synthetase subunit beta [Ferroplasma acidarmanus fer1] Length = 533 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 51/308 (16%) Query: 397 ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEK 456 I Y RKI + EV +L G++ E+++ +L ++G+ + V+VP R DV Sbjct: 261 INYDWRKIEITHKEVTKLMGLEP--ENTVILLRKMGYRCEVTSGGYRVNVPGNRIDVMGP 318 Query: 457 ADLVEEILRIYGVDQIKSEPL-------PLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 D++E+I + YG +I ++PL P T ED+ +K +L S E Sbjct: 319 VDIIEDIAKAYGYWRIPAKPLKTSGTGVPYTPNEDE----------NIIKGILTSINYQE 368 Query: 510 VVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 V ++ ++ E G ++ I NP S + S +R L PG++ N R + I Sbjct: 369 VRSF-ILNSEDFYRKTGYSGDVIITNPKSLEYSVIRDKLYPGIISLLAINKRRKLP-LKI 426 Query: 570 FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVI 629 FE+ V + E + K A +D +V+ Sbjct: 427 FEIGQVVVSGNQESHLCVLYNNSKA--------------------------AYSDIYAVL 460 Query: 630 EPFVSLD---SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICG 686 E ++ + G + GR G I LG GE P+IL FG+ NP+ Sbjct: 461 EYLLARTINAGAKVLQGNYNEIISGRGGDI-VYENTTLGIIGEMDPSILVDFGIQNPVAF 519 Query: 687 FEVYLDSI 694 E+ LD + Sbjct: 520 MEINLDKL 527 >gi|156051426|ref|XP_001591674.1| hypothetical protein SS1G_07120 [Sclerotinia sclerotiorum 1980] gi|154704898|gb|EDO04637.1| hypothetical protein SS1G_07120 [Sclerotinia sclerotiorum 1980 UF-70] Length = 609 Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 93/427 (21%), Positives = 162/427 (37%), Gaps = 72/427 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+ + S+ II G H+ NT +V +E+ Sbjct: 216 VIYDSNRTVMSMPPIINGDHSKITLNTKNVFIEMT------------------------- 250 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYK------PRKIVFMNSEV 411 G D + V IVS+ C + +I N + PR+ + Sbjct: 251 -GTDRTKLEIVNNIIVSMFSQYCAEPFTIEPVEIISEHNQETRQTPNLSPRETEAEVDYI 309 Query: 412 KRLSGIDVPIEDSLRILERLGFSV-IGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYG 468 G+ E +L+++ S DK +VS+P R DV + D++E++ YG Sbjct: 310 NNCCGLSETPEKICELLKKMCLSAKPSSKDKNLLDVSIPPTRADVLHQCDIMEDVAIAYG 369 Query: 469 VDQIK----------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 + + ++PLP+ ++ D R + + + +L S N+++++ Sbjct: 370 FNNLPRTSPNKASTIAQPLPINKLGDIVRTETAMAGWSEVMPLILCSHDE----NFAWLN 425 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 ++ G + + NP +A+ +RTSLLPGLLK N ++ +FEVS V Sbjct: 426 RKDD-----GTTAVRLANPKTAEYQVVRTSLLPGLLKTIRENKKHSLP-LKVFEVSDVAF 479 Query: 578 ND-----TPEGQKYMAAGIRKGSSGIEGSG----RLWSDKSEERCRFVDLFDAKADALSV 628 D +++ AA +SG E R+ + + K S+ Sbjct: 480 KDLSLERKSRNERHFAAAWYGKTSGFEVVHGLLDRILLMLQTAFLTHEEGLEGKKMDFSI 539 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPIC 685 E D E + G + I E+ +G FG HP +LD F L P+ Sbjct: 540 KENPTKPDGYWIEEIDEPTFFAGHAAAIYLRLGGKEVRVGEFGILHPTVLDKFELRYPVS 599 Query: 686 GFEVYLD 692 E+ L+ Sbjct: 600 TLEINLE 606 >gi|203287957|ref|YP_002222972.1| phenylalanyl-tRNA synthetase beta chain [Borrelia recurrentis A1] gi|238690574|sp|B5RPL7|SYFB_BORRA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|201085177|gb|ACH94751.1| phenylalanyl-tRNA synthetase beta chain [Borrelia recurrentis A1] Length = 564 Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 25/287 (8%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G + D L++LG S E D F + P +R D + D++EE++ G+ Sbjct: 298 VNKLLGSNFTANDMCLDLKKLGISAYFEESDTFYIMPPVYRNDFLHEVDVIEEVMIGKGL 357 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGG 527 D KSE LP K LS + +R V+ ++ E++ SK + + G Sbjct: 358 DNFKSE-LPKDFTIGK--LSPIEEFSRSVRNLMIGMGFQEMIYNYLGSKVDFIEKMNIKG 414 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NP++ +R S++P LLK+ + + IFE+ V D + Sbjct: 415 SELLSVSNPMTESYEYIRGSIIPDLLKSESISSNFPYPH-KIFEIGKVALKDLVSDE--- 470 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G+ + L +DK F+ +S + ++++ + + + + Sbjct: 471 ------GTVTYDNLAFLMADKEFS-------FNEINSLVSSLFYYLNI-GFKVKESSKNL 516 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y GR I + +IVLG FGE P IL+ FG+ P C E+ ++ + Sbjct: 517 YIDGRGADILVN-DIVLGCFGEVSPYILNNFGIMVPCCVLEININGL 562 >gi|308813562|ref|XP_003084087.1| Phenylalanyl-tRNA synthetase beta subunit (ISS) [Ostreococcus tauri] gi|116055970|emb|CAL58503.1| Phenylalanyl-tRNA synthetase beta subunit (ISS) [Ostreococcus tauri] Length = 520 Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 99/417 (23%), Positives = 158/417 (37%), Gaps = 61/417 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV S+G + S+ II G + +TTDV +E D +N A+ N + S Y E Sbjct: 146 VVRDSEGTVLSLPPIINGAKSAITLDTTDVFIECTATD-LNKAKIVLNTMVTMFSEYCAE 204 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV----KRL-SG 416 P V ++ C + TY F++++V KR+ + Sbjct: 205 ---------PFCVEPVEVV----------DCTGKETTYPDFMTRFVDADVDYINKRIGTS 245 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ID +L +L + + V VP R D+ D+ E++ +G + I Sbjct: 246 IDRKTMAALLCKMQLQTKLGADEKTLRVEVPPTRSDILHPCDIAEDVAIAHGYNNIAR-- 303 Query: 477 LPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE- 532 V ++ Q ++ V+ +A E++ W S + + F RE Sbjct: 304 ----TVPKAYTIASAQPINKFSDAVRDEVARSGFSELLTWILCSHDDN--FANVLREDNG 357 Query: 533 -----ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 + NP S D+ R+SLLPG LKA G N D + +FEV V D Sbjct: 358 NSAAIVANPSSLDVQVARSSLLPGALKALGANKDAPLPA-KLFEVGDVVVLDP------- 409 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF----ESG 643 G S RL S F ++ D + + D F E+ Sbjct: 410 -----TADVGARNSRRLLVLYSNVHSGF-EVVQGVLDRVMQVVGIAKFDGSDFGYQLEAS 463 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKK 700 + Y PGR I + + G FG HP++ F + +P E+ L+ + + KK Sbjct: 464 SEPTYFPGRQAYIMREGKRI-GVFGIVHPDVCAKFDIVSPTSILELDLEPLMPTLKK 519 >gi|255564405|ref|XP_002523199.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] gi|223537606|gb|EEF39230.1| phenylalanyl-tRNA synthetase beta chain, putative [Ricinus communis] Length = 593 Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/264 (26%), Positives = 107/264 (40%), Gaps = 53/264 (20%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKS------EPLPLTQVEDKRNLSLQQSRTRY 497 VS+P R DV D++E++ YG + I +PL L Q+ED Sbjct: 354 VSIPPTRSDVLHPCDVMEDVAIAYGYNNIPKRKLPSLKPLALNQLED------------L 401 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFG------GGQRELEILNPISADMSNMRTSLLPG 551 ++ +A EV+ W S ++ FG G + + NP S+D +RTSL+PG Sbjct: 402 IRVEVAMNGFTEVLTWILCSYREN--FGMLNRKDDGSTAVIVGNPRSSDFEVVRTSLMPG 459 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIEGSGRLWS 606 LK G N D IFEV + + D + ++ +AA +SG E Sbjct: 460 ALKIVGHNKDHP-KPIKIFEVGDIAKLDDSKDVGAANRRLLAALYCGTNSGFE------- 511 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDS---LRFESGAPSWYHPGRSGIIKTSAEIV 663 L D + + PFV + + + + PGR I + + Sbjct: 512 -------LIHSLVDRVMEVMGT--PFVPIGNNTGYYIQCCDAPEFLPGRQASIIYKGKHI 562 Query: 664 LGYFGEFHPNILDFFGLSNPICGF 687 G FG HP +L+ F + +P C F Sbjct: 563 -GIFGIVHPEVLNNFDIPDP-CSF 584 >gi|15615813|ref|NP_244117.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus halodurans C-125] gi|10175874|dbj|BAB06970.1| phenylalanyl-tRNA synthetase (beta subunit) [Bacillus halodurans C-125] Length = 200 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S +++P+ D +I ++D G +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGFVQSKDKHPNADKLSICKVDVGS-DTLQIVCGAPNVEAGQKVVVALEGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ +RG+ STGM+CS KEL L D Sbjct: 151 -SGLVIKPTSLRGVSSTGMICSAKELALPD 179 >gi|161528996|ref|YP_001582822.1| phenylalanyl-tRNA synthetase subunit beta [Nitrosopumilus maritimus SCM1] gi|160340297|gb|ABX13384.1| phenylalanyl-tRNA synthetase, beta subunit [Nitrosopumilus maritimus SCM1] Length = 547 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/328 (21%), Positives = 134/328 (40%), Gaps = 43/328 (13%) Query: 376 IVSLILSLCGGTASDICI--ARNITYK--PRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 +V+ IL G + + I A+N T K RK+ S + + G+D+ + L++ Sbjct: 243 VVATILQSAGFSLETVTISGAKNTTPKLAERKMTVSPSLINQTLGLDLKTPKIISSLKKS 302 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 + + ++P++R D+ DLVEE+ YG+ ++ P + +SL+ Sbjct: 303 RLDAVSKGKNIVCTIPAYRFDIFGPMDLVEEVALGYGIQNLEPTLSPSQTLGQTNPVSLE 362 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTS 547 + + + + +E +N S SK VL+ RE + +L+ S + + +R S Sbjct: 363 ---LKSLNQTMIGLGYLEALNSSLTSKR--VLYEMANREPKTIISVLDSKSQEHTILRDS 417 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSD 607 +LPGLL+ +N+ + +FE V+ P + +GI Sbjct: 418 ILPGLLENLSKNIHESYPQ-KLFETGTVFSAGNPISETINLSGIS--------------- 461 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIV 663 + + F ++ AL E + HP G + + + V Sbjct: 462 -AHQDANFTEIKSVLQSALKT--------GFDLEIQTKTTQHPTFEKGHCADVIINGKPV 512 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYL 691 G GE + I++ + + P+ GFE+ L Sbjct: 513 -GVIGEINSKIIENYKIRVPVVGFEISL 539 >gi|304571947|ref|NP_001182135.1| phenylalanyl-tRNA synthetase beta subunit [Bombyx mori] gi|303304921|dbj|BAJ14787.1| phenylalanyl-tRNA synthetase beta subunit [Bombyx mori] Length = 583 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 72/275 (26%), Positives = 112/275 (40%), Gaps = 38/275 (13%) Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQV--ED 484 +L R+ E V VP R DV DL E+I YG ++I P +D Sbjct: 329 LLSRMCLQTAHEGSVLRVRVPPTRHDVIHACDLYEDIAIAYGYNRIARRPARAVTSGGQD 388 Query: 485 KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISAD 540 N +Q R A E + ++ S+E G + E I NP + + Sbjct: 389 PANKLTEQLRNE-----CARAGYTEALTFTLCSREDVSTKLGVKIEDVPAAHISNPKTLE 443 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV--YENDTPEGQKYM--AAGIRKG-S 595 +RT LLPGLLK N + +FE+S V + + G + + A G+ G + Sbjct: 444 FQVVRTLLLPGLLKTIAANKKMPLP-LKLFEISDVVLLDENAESGARNVRRACGVHCGRA 502 Query: 596 SGIEG-SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG 654 +G + G L ++ R R D + +LR + P+++ PGR Sbjct: 503 AGFQHVHGLLDRLMAQLRVRHRDQY-----------------ALR-PAQDPAYF-PGRCA 543 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + V+G G HPN+L F L+NP E+ Sbjct: 544 EVVLQGK-VIGKIGVIHPNVLTAFELTNPCSAVEI 577 >gi|164654929|ref|XP_001728600.1| hypothetical protein MGL_4265 [Malassezia globosa CBS 7966] gi|159102472|gb|EDP41386.1| hypothetical protein MGL_4265 [Malassezia globosa CBS 7966] Length = 345 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/337 (23%), Positives = 134/337 (39%), Gaps = 67/337 (19%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKA 457 PRK S V R +G+ E+ +L+R+G + D +V +P R D+ + Sbjct: 32 PRKTTLHVSYVNRCTGLKQTGEEIAGLLKRMGHGACPSASDPDIVDVLIPVTRPDILHEC 91 Query: 458 DLVEEILRIYGVDQIKSE---------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM 508 DL+E+ +G D + PLP+ ++ D ++ A + Sbjct: 92 DLMEDAAVAHGFDNLPKTFPQTNTVGGPLPINKLGD------------VIRHQCAQSGWL 139 Query: 509 EVVNWSFISKEQSVLFG------GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 EV+ S +++ FG G+ + + NP +++ +RTSLLPG+LK N + Sbjct: 140 EVLPLILCSHDEN--FGWMNRSDDGKTAIVLENPKTSEYQIVRTSLLPGILKTIRENKNH 197 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 A+ +FEVS V D E Q+ MA R ++ ++ +K+ L D Sbjct: 198 ALP-VQVFEVSDVAFKDASEKQR-MARNERHVAA-------IYCNKAAGFEIVHGLLDKL 248 Query: 623 ADALSVIEPFVSLDSLR-----FESGAPSWYHPGRSGII--------------------K 657 L V F + + E+ PS++ PGR+ I Sbjct: 249 MMMLDVPRIFNGDEKAQRGYYLREAEDPSFF-PGRAAHIVLRQPVPSSRGLESTHDLMQA 307 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + +G G HP +L F L+ P FE L+ Sbjct: 308 LGGDQCVGTIGVLHPEVLHRFDLAFPCSAFEFNLEPF 344 >gi|150401799|ref|YP_001325565.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus aeolicus Nankai-3] gi|166227804|sp|A6UWT1|SYFB_META3 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|150014502|gb|ABR56953.1| phenylalanyl-tRNA synthetase, beta subunit [Methanococcus aeolicus Nankai-3] Length = 554 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 58/263 (22%), Positives = 110/263 (41%), Gaps = 37/263 (14%) Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 E + ++++P++R D+ D+++++ YG + + + +K ++ + + + Sbjct: 315 EDENIKITIPAYRTDILNNMDIIKDVAINYGYENFNGNLPVVATIGEKHDI---EKKFEF 371 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL------EILNPISADMSNMRTSLLPG 551 ++ + + EV+N + Q VLF + E+L P S + +R ++LP Sbjct: 372 IRNTMIGYGLFEVMNLTL--SNQDVLFNKMNENIEDNEYVEVLKPASIEHRVVRPTILPL 429 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM-AAGIRKGSSGIEGSGRLWSDKSE 610 LL+ N + IFEV D + Y + K S+ I + Sbjct: 430 LLETLANNKHNELPQ-KIFEVGDCVVIDEKDETLYTHCKNVPKVSAVI----------TH 478 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGY 666 F ++ ++E + + E ++ HP GR I EIV GY Sbjct: 479 HNANFNEI-------KGLVEGLIR--EMNIEYSIDNYKHPSFIEGRCAKIIVDDEIV-GY 528 Query: 667 FGEFHPNILDFFGLSNPICGFEV 689 FGE HP ++ F L P+ GFE+ Sbjct: 529 FGELHPEVILNFELGYPVVGFEM 551 >gi|307704018|ref|ZP_07640950.1| putative tRNA binding domain protein [Streptococcus mitis SK597] gi|307622409|gb|EFO01414.1| putative tRNA binding domain protein [Streptococcus mitis SK597] Length = 208 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G V+++E F + +++ + +PD D I ++ + Sbjct: 68 SDEQVARLNQELQAEGFTEAIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN R+GL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNARLGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL D VG Sbjct: 185 RGIIELSEDQVVG 197 >gi|45358818|ref|NP_988375.1| phenylalanyl-tRNA synthetase subunit beta [Methanococcus maripaludis S2] gi|74554014|sp|Q6LXU2|SYFB_METMP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|45047684|emb|CAF30811.1| Phenylalanyl-tRNA synthetase beta subunit [Methanococcus maripaludis S2] Length = 554 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 62/313 (19%) Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEE 462 +I+ + S K+L G+++ + ++ L++ G + E V +P++R D+ + DL EE Sbjct: 281 RIISVESINKKL-GLNLNPGEIIQALKKSGMDALYEDGNLIVKIPAYRNDILQNVDLKEE 339 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK---- 518 I YG ++ + L V + + + + ++ EV+N + ++ Sbjct: 340 IAINYGYEKFDGK---LPSVATTGSKDPVEKKCSAMSDLMIGLGFYEVMNLTLSNQDTLF 396 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH---V 575 E+ L + +E+L P S + +RTS+LP LL+ N A+ IFEV + Sbjct: 397 EKMNLKVDEKDYIEVLKPASIEHRVLRTSILPLLLETLYINKHNALPQ-KIFEVGDCVVI 455 Query: 576 YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSL 635 E DT +++ +C+ + K A ++ P + Sbjct: 456 DEEDT---------------------------ETDTKCK-----NIKKIAGAITHPLTNF 483 Query: 636 DSLRFESGA-----------PSWYHP----GR-SGIIKTSAEIVLGYFGEFHPNILDFFG 679 + ++ + A ++ HP GR + I+K+ E+ G+FGE HP ++ F Sbjct: 484 NEIKSSTEALLREFFEGFEFENYEHPAFIPGRCAKILKSGKEV--GFFGEIHPEVILNFE 541 Query: 680 LSNPICGFEVYLD 692 L +P+ GFE+ ++ Sbjct: 542 LEHPVVGFEITIE 554 >gi|15669296|ref|NP_248101.1| phenylalanyl-tRNA synthetase subunit beta [Methanocaldococcus jannaschii DSM 2661] gi|12644575|sp|Q58508|SYFB_METJA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1591750|gb|AAB99110.1| phenylalanyl-tRNA synthetase, subunit beta (pheT) [Methanocaldococcus jannaschii DSM 2661] Length = 548 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 52/269 (19%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYV 498 +K +V +P++R D+ + D+ EE+ YG ++ E P+ T E L+ + + ++ Sbjct: 316 NKIKVFIPAYRVDIFGEIDIAEEVAIAYGYNKFSGEYPIIGTIGE----LNQLEKKCDFI 371 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLK 554 + ++ EV+N + E VLF + E +E+L P S + +R S+LP L++ Sbjct: 372 REIMVGFGFYEVINLMLSNDE--VLFKKMRIEDNNYIEVLKPASIEHRIVRKSILPLLME 429 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N + + IFE+ G + + +E + R Sbjct: 430 TLRINKHKELPQ-KIFEI---------------------------GDCVVIDENAETKSR 461 Query: 615 FVD-----LFDAKADALSVIEPFVS--LDSLRFESGAPSWYHP----GRSGIIKTSAEIV 663 V + D + + + I+ +V L L+ E ++ HP GR I +I+ Sbjct: 462 VVKKIAGVIVDNETN-FNEIKSYVEGLLRELKIEYELDNFEHPSFIKGRCAKILKDGKII 520 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GYFGE HP ++ F L P+ GFE+ ++ Sbjct: 521 -GYFGEIHPEVITNFELEFPVVGFELEIE 548 >gi|296877161|ref|ZP_06901201.1| tRNA binding domain protein [Streptococcus parasanguinis ATCC 15912] gi|296431681|gb|EFH17488.1| tRNA binding domain protein [Streptococcus parasanguinis ATCC 15912] Length = 208 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 7/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + ++ L G V++RE F + ++ + +PD D I ++ G + Sbjct: 68 TDEQVVRLNQELEREGFAERLVNDRE--PKFVVGEIREMVAHPDSDHLNICQVAVGPDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN RVGL + A PG+ +P+ ++I +RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNTRVGLKTIVALPGAMMPDGSLIFP-GALRGEKSYGMMCSPRELHLPNAPQK 184 Query: 131 ASIMELPIDAPVGG 144 I+EL DA V G Sbjct: 185 RGIIELD-DAEVAG 197 >gi|222152329|ref|YP_002561504.1| tRNA-binding protein [Streptococcus uberis 0140J] gi|222113140|emb|CAR40554.1| putative tRNA-binding protein [Streptococcus uberis 0140J] Length = 208 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 4/103 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I ++ Q++Q+V GAPN +VGL + A PG+ +P ++ Sbjct: 96 FVVGQIMEMVAHPDSDHLNICQVQVAADQKVQIVAGAPNAKVGLKTIVALPGAMMPNGSL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 I K+RG +S GMMCS +EL L + I+EL A VG Sbjct: 156 IFP-GKLRGEDSFGMMCSPRELALPNAPQKRGIIELDESAIVG 197 >gi|310793024|gb|EFQ28485.1| phenylalanyl-tRNA synthetase [Glomerella graminicola M1.001] Length = 610 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 130/602 (21%), Positives = 234/602 (38%), Gaps = 112/602 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL--------------------------VAAGLGKLKE 188 P + + + NR D + GIAL L VA GK++ Sbjct: 54 PQLKIEIPANRYDMLCFEGIALMLNIFRGTVAAPNYKVVEPKNPETQVITVAQDTGKIR- 112 Query: 189 INISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRS 245 PL + +I IKF+ + DS + G+++ + N RQR L A+G Sbjct: 113 -----PLVAGAILRNIKFNQESYDSFI----------GLQDKLHMNLARQRTLVAIGTHD 157 Query: 246 ISALVDITNYVSLD-RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVI 304 + + Y +L R + ++ + + + G+K L SP VI Sbjct: 158 LDTIQGPFTYEALPPRDIKFKPLNQTKEMNGEELMQFYEGDKHLGKYLHIIKDSPVYPVI 217 Query: 305 ASDGRIQ-SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD------SR 357 R+ S+ II G H+ +T +V +E+ A L I+ D S+ Sbjct: 218 YDKNRVVCSLPPIINGDHSKITVDTKNVFIEMT-------ATDATKLDIVCDMMVTMFSQ 270 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 Y E P V ++ G + + +A PR I + +G+ Sbjct: 271 YCSE---------PFTVEPVKIVSEHNGASRTTPTLA------PRNIDVEIDYLNACTGL 315 Query: 418 DVPIEDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK- 473 + E ++L ++ + + + VS+P R DV + D++E++ YG + + Sbjct: 316 NESPETLCKLLTKMAYIAKPSTKDSNLLNVSIPVTRADVLHQCDVMEDLAICYGYNNLPR 375 Query: 474 ---------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL 523 PL + ++ D R + + + +L S N+ +++++ Sbjct: 376 SSPNKSATIGAPLMINKLADIVRTEAAMSGWSEVMPLILCSHDE----NFGWLNRKDD-- 429 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE 582 G+ +++ NP +A+ +RTSL+PGLLK N ++ IFE + V+++++ E Sbjct: 430 ---GKTAVKLANPKTAEYQVVRTSLVPGLLKTIRENKKHSVP-IKIFESADVVFKDESLE 485 Query: 583 ----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVD----LFDAKADALSVIEPFV 633 +++ A +SG E G L R F+ L K+ V+E Sbjct: 486 RKARNERHFGAAWYGKTSGFEVVHGLLDRILLMLRTAFLTHDEGLTAGKSVDFKVVENPS 545 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 D E + + PG + I E +G FG HP +L+ F L P+ E+ Sbjct: 546 KPDGYWIEEIDEATFFPGHAAAIYLRLGGKEARIGEFGILHPTVLEKFDLRYPVSTLEIN 605 Query: 691 LD 692 L+ Sbjct: 606 LE 607 >gi|229087244|ref|ZP_04219388.1| hypothetical protein bcere0022_38150 [Bacillus cereus Rock3-44] gi|228696034|gb|EEL48875.1| hypothetical protein bcere0022_38150 [Bacillus cereus Rock3-44] Length = 201 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E EKV+ L+P F + V E++P+ D +I +++ G + +Q+ Sbjct: 72 VEKINEILAENGFE-EKVEAD--LTPKFVVGYVAEKEKHPNADKLSICKVEIGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG S+GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGTPSSGMLCSARELELPD 179 >gi|19074167|ref|NP_584773.1| PHENYLALANYL tRNA SYNTHETASE ALPHA CHAIN [Encephalitozoon cuniculi GB-M1] gi|74630159|sp|Q8SS40|SYFB_ENCCU RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|19068809|emb|CAD25277.1| PHENYLALANYL tRNA SYNTHETASE ALPHA CHAIN [Encephalitozoon cuniculi GB-M1] Length = 557 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 27/185 (14%) Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPSWRQDVEEKADL 459 R V E+ R G+D+ + + +ER+ SV I E V V R DV K DL Sbjct: 279 RSYVMGLGEINRSLGLDLSLSAAKSYMERMMHSVDTIDE-STLRVRVHDIRSDVLHKCDL 337 Query: 460 VEEILRIYGVDQIKSE---------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 +E+I +G + + E +PL + DK ++ L+ E Sbjct: 338 IEDIAIAHGFNNFRRELPSFFTAGSEIPLNKFSDK------------LRTELSIMGFDEA 385 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 + + +S+E++V+ G + + ++NP SA RTSL+PGL+K N+ I F +F Sbjct: 386 LTLTLLSREENVI--DGDQAVVLMNPKSASYEVCRTSLIPGLMKTVASNLHMKIP-FRLF 442 Query: 571 EVSHV 575 EVS V Sbjct: 443 EVSDV 447 >gi|161484930|ref|NP_275912.2| phenylalanyl-tRNA synthetase subunit beta [Methanothermobacter thermautotrophicus str. Delta H] gi|12229962|sp|O26864|SYFB_METTH RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS Length = 549 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 40/301 (13%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV-PSWRQDVEEKADL 459 PR++ SE R++G+++ ++ + +L + D V+V P++R D+ + DL Sbjct: 274 PREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDL 333 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VE I + + +I+ E + + ++ S + R V L + +M ++ S S Sbjct: 334 VENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHY 393 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEN 578 + + +R +E+ PIS D + +R SLL GLL+ N + IFEV V Y N Sbjct: 394 RRMRLEEDER-VEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQ-KIFEVGDVVYIN 451 Query: 579 DTPEGQKY----MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 E + +A + S+G + K+ A +V+E Sbjct: 452 PESETRSRVVTKLACAVTHSSAG--------------------FTEIKSLAAAVVE---- 487 Query: 635 LDSLRFESGAPSWYHP----GRSGIIKTSAE--IVLGYFGEFHPNILDFFGLSNPICGFE 688 +L +E HP GR I++ + + G+FGE HP ++ F L P+ E Sbjct: 488 --NLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALE 545 Query: 689 V 689 + Sbjct: 546 I 546 >gi|320170564|gb|EFW47463.1| phenylalanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864] Length = 582 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 70/297 (23%), Positives = 119/297 (40%), Gaps = 48/297 (16%) Query: 416 GIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 GI E ++L R+ +V + V +P R DV D++E++ YG + ++ Sbjct: 311 GIKQTPEQVAKLLSRMCLPATVSADGKSVVVDIPPTRSDVIHACDIMEDVAVGYGFNNLE 370 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 + LP+ ++ D L + A EV+ +S S ++ F Sbjct: 371 WTVPATSTVAHQLPVNKLTDLLRLEM------------AMAGFTEVLTFSLCSHAEN--F 416 Query: 525 GGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + + + + NP S + RTSL+PGLLK N++ + +FE+S V D Sbjct: 417 SNMRHQDDNSAVVLANPQSVEFQVCRTSLMPGLLKTLHSNLNVPLP-MRVFEISDVVLKD 475 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSL--- 635 T +G RL S +F + ++V+E PF Sbjct: 476 T------------ASDTGARNERRLAVLYSNIASQFEIVHGVLDRVMTVLEVPFNVAGGD 523 Query: 636 DSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 +S A S Y PG++ I + + G G HP +L F L NP+ E+ ++ Sbjct: 524 KGYSLQSSADSMYFPGQAADIFANGRKI-GSIGVLHPEVLSAFALPNPVSCLEITIE 579 >gi|57529634|ref|NP_001006543.1| phenylalanyl-tRNA synthetase beta chain [Gallus gallus] gi|53133806|emb|CAG32232.1| hypothetical protein RCJMB04_20i16 [Gallus gallus] Length = 589 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 91/415 (21%), Positives = 152/415 (36%), Gaps = 75/415 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ T +V +E Sbjct: 223 VIFDSNGVVLSMPPIINGDHSKISLKTRNVFIECT------------------------- 257 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D+ VL IV++ C A ++ T+ ++ + +VK Sbjct: 258 -GTDMTKAKIVLDIIVTMFSEYCEKQFTVEAVEVTYPNGKTHICPELAYRKEKVKPELIN 316 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI ++L R+ S V G + EV +P R DV D+VE+ YG + Sbjct: 317 KKLGISETPSSLAKLLTRMCLSSHVTGNGNNIEVEIPPTRADVIHACDIVEDAAIAYGYN 376 Query: 471 QIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 I+ + LPL ++ T ++ LA+ E + ++ S E Sbjct: 377 NIQMVIPKTYTIANQLPLNKL------------TELLRLDLAAAGFTEALTFALCSTEDI 424 Query: 522 VLFGG----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 G + I NP +A+ RT+LLPGLLK N + +FE+S + Sbjct: 425 ADKLGMDISATNAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVV 483 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 D + G+ ++ +KS L D L V P + Sbjct: 484 KDPTKDV---------GARNYRHLCAIYYNKSPGFEIIHGLLDRVMQLLEV--PPNEENG 532 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ S + PGR I + V G G HP+++ F L+ P E+ ++ Sbjct: 533 YTIKATEGSAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSALEINIE 586 >gi|302406174|ref|XP_003000923.1| phenylalanyl-tRNA synthetase beta chain [Verticillium albo-atrum VaMs.102] gi|261360181|gb|EEY22609.1| phenylalanyl-tRNA synthetase beta chain [Verticillium albo-atrum VaMs.102] Length = 604 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 174/418 (41%), Gaps = 59/418 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ + + S+ II G H+ NT +V +E+ A L ++ D Sbjct: 216 VIFDKNRTVCSLPPIINGDHSKITVNTKNVFIEIT-------ATDATKLQVVCDMMVTMF 268 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL---SGID 418 G P V ++ T + +A + M+ E+ L +G++ Sbjct: 269 SG---NCAEPFTVEPVKIVSDHNQQTRTTPSLA---------LRTMDVEIDYLNACTGLN 316 Query: 419 VPIEDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 E ++L ++ + + + EVS+P R DV + D++E++ +G + + Sbjct: 317 EAPEKLCQLLSKMAYIAKPSSKDSNILEVSIPVTRADVLHQCDVMEDLAICHGYNNLPRS 376 Query: 474 --------SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 PLP+ ++ D R + + + +L + N+++++++ Sbjct: 377 TPNKSATIGAPLPINKLSDIIRTEAAMSGWSEVMPLILCAHDE----NFAWLNRKDD--- 429 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE- 582 G + + NP +A+ +RT+LLPGLLK N ++ IFEV+ V++++T E Sbjct: 430 --GTTAVRLANPKTAEYQVVRTTLLPGLLKTIRENKGHSVP-LKIFEVADVVFKDETQER 486 Query: 583 ---GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLD 636 +++ AA +SG E L D+ R F A+ + L+ ++P Sbjct: 487 RARNERHFAAAWYGKTSGFEVVHGLL-DRVLLMLRTA--FVAREEGLAAKKGVDPTPQDG 543 Query: 637 SLRFESGAPSWYHPGRSGIIKT--SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 E P+++ +G+ E +G FG HP +LD F L P+ E+ L+ Sbjct: 544 YWIEEVDEPTFFAGHAAGVYLRVGGKEHRIGEFGILHPTVLDKFDLKYPVSTLEINLE 601 >gi|14590543|ref|NP_142611.1| phenylalanyl-tRNA synthetase subunit beta [Pyrococcus horikoshii OT3] gi|12644562|sp|O73984|SYFB_PYRHO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3257065|dbj|BAA29748.1| 556aa long hypothetical phenylalanyl-tRNA synthetase subunit beta chain [Pyrococcus horikoshii OT3] Length = 556 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/412 (21%), Positives = 173/412 (41%), Gaps = 61/412 (14%) Query: 288 LALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLVEVALWDPINIARS 346 L D Q Y L +I S+G + S+ II + G +T +V ++V W Sbjct: 192 LIKDKQFYPL-----LIDSEGNVLSMPPIINSEFTGRVTTDTKNVFIDVTGWK------- 239 Query: 347 GKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYK-----P 401 L+ ++ L +V+ + G S + ++ + P Sbjct: 240 -------------------LEKVMLALNVMVTALAERGGKIRSVRVVYKDFEIETPDLTP 280 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 ++ +++LSG+++ + +LE++ + V + ++ P++R D+ D++E Sbjct: 281 KEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEISRGRAKLKYPAFRDDIMHARDILE 340 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-Q 520 ++L YG + I+ E P V+ + + + ++ ++ + EV+ ++ +KE Q Sbjct: 341 DVLIAYGYNNIEPEE-PKLAVQGRGDPF--KDFEDAIRDLMVGFGLQEVMTFNLTNKEVQ 397 Query: 521 SVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + E+ EI NPIS S +R +LP L++ N IFEV D Sbjct: 398 FKKMNIPEEEIVEIANPISQRWSALRKWILPSLMEFLSNNTHEEYPQ-RIFEVGLATLID 456 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 E ++ K + + G+G +++ E + DA L + Sbjct: 457 --ESRETKTVSEPKLAVALAGTGYTFTNAKE-------ILDALMRHLG-----FEYEIEE 502 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 E G+ + PGR+G I + + G GE HP +L+ + + P+ FE++L Sbjct: 503 VEHGS---FIPGRAGKIIVNGRDI-GIIGEVHPQVLENWNIEVPVVAFEIFL 550 >gi|94993504|ref|YP_601602.1| tRNA binding domain protein [Streptococcus pyogenes MGAS10750] gi|94547012|gb|ABF37058.1| tRNA binding domain protein [Streptococcus pyogenes MGAS10750] Length = 208 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + +PD D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPIVGPVFVVGQIVEMVAHPDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ I +N ++ K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGA-IMQNGSLIFPGKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|313891193|ref|ZP_07824812.1| tRNA binding domain protein [Streptococcus pseudoporcinus SPIN 20026] gi|313120556|gb|EFR43676.1| tRNA binding domain protein [Streptococcus pseudoporcinus SPIN 20026] Length = 208 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 ++ ++K+ L G E ++E + F + ++ + +PD D I ++ G + Sbjct: 68 SESDIKKLNAELAKEGFAEELEASQEPV--FVVGQIQEMVAHPDSDHLNICQVAIGSDKR 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN VGL + A PG+ +P ++I K+RG++S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAAVGLKTIVALPGAMMPSGSLIFP-GKLRGVDSYGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL A VG Sbjct: 185 RGIIELDQSALVG 197 >gi|301299773|ref|ZP_07206016.1| tRNA binding domain protein [Lactobacillus salivarius ACS-116-V-Col5a] gi|300852628|gb|EFK80269.1| tRNA binding domain protein [Lactobacillus salivarius ACS-116-V-Col5a] Length = 216 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 7/128 (5%) Query: 5 LSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR---EALSPFTIVKVLSVERNPDLD-C 60 L+ L+ H + ++ E++ D L + LE D +A F + V S++ +PD D Sbjct: 57 LADLQGHGEEQLNQEQV-DKLNKL-LEENDFDPELILDANPKFVVGYVESMKEHPDSDHL 114 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 I ++ QE+Q+VCGAPN+ G V A G+ +P MI K+RG+ES GM+CS Sbjct: 115 HITKVKVDNDQELQIVCGAPNIDEGQKVVVAKVGAMMPNGAMIF-PGKLRGVESMGMICS 173 Query: 121 EKELMLSD 128 +EL L + Sbjct: 174 ARELELPN 181 >gi|126178594|ref|YP_001046559.1| phenylalanyl-tRNA synthetase subunit beta [Methanoculleus marisnigri JR1] gi|166227809|sp|A3CT77|SYFB_METMJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|125861388|gb|ABN56577.1| phenylalanyl-tRNA synthetase beta subunit [Methanoculleus marisnigri JR1] Length = 546 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 37/304 (12%) Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEK 456 T P + V +E RL G+ + ++ +L R+ F + D + + VP +R D+ Sbjct: 265 TLAPAERVVSVAECSRLLGLSLTPQEMAGLLRRMRFDAEPDGDSRVRILVPCYRSDILHD 324 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D+ E++ YG++ + LP T + + + V+ V+ +E + ++ Sbjct: 325 WDIFEDVAIAYGIENFDAA-LPATSTVAQEHPIPAVAGA--VRSVMTGLGYLEAIPFTLT 381 Query: 517 SKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + VL+ QRE L +L+PIS + + +RT LLP L++ N R + +F Sbjct: 382 N--ERVLYANMQREPAPGTLRLLHPISEEQTVVRTDLLPLLMEMLLANKHRELPQ-RLFA 438 Query: 572 VSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP 631 V V E D K A I + D SE A AD L Sbjct: 439 VGDVVE-DCVTYLKVAAVSIHPAA-----------DFSEAY--------AAADVLCR--- 475 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +SL ES P++ GR G I +IV G FGE HP +L F L +P+ + L Sbjct: 476 ELSLSYTVVESADPAFLD-GRRGDIVVDGKIV-GVFGEIHPAVLGAFDLEHPVAALALDL 533 Query: 692 DSIP 695 ++P Sbjct: 534 TAVP 537 >gi|261334150|emb|CBH17144.1| phenylalanyl-tRNA synthetase (beta subunit),putative [Trypanosoma brucei gambiense DAL972] Length = 624 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 78/309 (25%), Positives = 125/309 (40%), Gaps = 27/309 (8%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSL-RILERLGFSVIG-EYDKFEVSVPSWRQDVEEKAD 458 PR + S+V+RL GI + + + +LER+ V E V VP R DV D Sbjct: 317 PRLVSVEQSKVERLIGIKLNSANHMGELLERMLHHVAKVEDSTVTVEVPPTRPDVLGPTD 376 Query: 459 LVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFI 516 L+E++ YG D I E L V + S+ ++ R+ +A+ ME++ +S Sbjct: 377 LMEDVAVAYGYDNITHKECLTFGDVAQQ-----PLSKLSHLIRIEMANAGYMELLTFSLC 431 Query: 517 SKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI------- 564 S+E+ F R + I NP + + R SL+PG+LK N + Sbjct: 432 SREEG--FARLNRVDDDVAVHIANPKTMEFQICRPSLMPGILKTLNANKSHPLPLRFFEC 489 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 AD + + + +Y G R S E+ V+ AK Sbjct: 490 ADIVLLDNEKNFPPVITPKLEYPNCGARNQRHLAALHCCSESSSFEDIHGLVEFVMAKLG 549 Query: 625 AL-SVIEPFVSLDSLRFESGAPSWYHPGRS---GIIKTSAEIVLGYFGEFHPNILDFFGL 680 + V E V DS E + + PGR + ++ ++ +G FG HPN L + + Sbjct: 550 VVRKVGEEVVDGDSYTLERSSDGAFFPGRCMDVFLHRSGQKVCIGGFGVVHPNTLKAYDI 609 Query: 681 SNPICGFEV 689 P E+ Sbjct: 610 PFPCSYMEL 618 >gi|242002964|ref|XP_002436113.1| phenylalanyl-tRNA synthetase beta subunit, putative [Ixodes scapularis] gi|215499449|gb|EEC08943.1| phenylalanyl-tRNA synthetase beta subunit, putative [Ixodes scapularis] Length = 587 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 88/401 (21%), Positives = 158/401 (39%), Gaps = 47/401 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ + + S+ II G H+ +T +V +EV D ++ ++ + + S+Y Sbjct: 221 VILDKNDTVLSLPPIINGNHSKITLDTKNVFIEVTSTD-LHKSKVALDTLVTMFSQY--- 276 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P + V +++ GT S + + Y ++ S+ + GI+ Sbjct: 277 ------CATPFVAEKVQVVMP--DGTTS---VHPELKY--WEMDLKASQANKFLGIEKSE 323 Query: 422 EDSLRILERLGFSVIGEYD-KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 + R+L R+G V +P R DV ADL+E++ G DQI P Sbjct: 324 SELARLLTRMGLGAKEGGGGTLRVEIPPTRHDVLHVADLLEDVAVSVGYDQIPRHLPPTA 383 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK----EQSVLFGGGQRELEILNP 536 V R L + T ++ LA E + ++ SK ++ + G + + I NP Sbjct: 384 TV--ARQFPLNK-LTEQLRSELAQAGFTEALTFALCSKLDISDRILKPEGDKIAVHISNP 440 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGI 591 + + RT+LLPGLLK N + + +FEV V DT ++++ A Sbjct: 441 KTLEFQVARTTLLPGLLKTVHANKNMPLP-LKLFEVQDVVLRDTDSEVGAINRRHVCAIH 499 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 + G E L + + +++ D D + PG Sbjct: 500 YGKTPGFEAVHGLL----DRVMQLLEVSFGHGD-----------DQYHIRQAKDESFFPG 544 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 R + +V G G HP+++ F L+ P E+ L+ Sbjct: 545 RCAEVVARGSVV-GRLGVLHPDVITGFDLALPCAALEINLE 584 >gi|118586733|ref|ZP_01544170.1| hypothetical tRNA binding protein [Oenococcus oeni ATCC BAA-1163] gi|118432821|gb|EAV39550.1| hypothetical tRNA binding protein [Oenococcus oeni ATCC BAA-1163] Length = 203 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 6/141 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 T +E++ + L G + E V + EA F I V S ++PD D + ++ + Sbjct: 58 TAKKIEELNELLIQAGFKPELVYDPEA--KFVIAYVDSFVKHPDSDHLHVAQVKISSDKS 115 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V G+PN+R G+ V PG+ +P I+ K+RG++S GMM + KEL L + D Sbjct: 116 VQIVSGSPNLRQGIKTVACLPGAIMPSGK-IIWPEKLRGVDSYGMMAAPKELGLKNAPDH 174 Query: 131 ASIMELPIDAPVGGRLSDYLE 151 ++ LP D G D+++ Sbjct: 175 PGMIVLPDDFGKVGETFDFIK 195 >gi|296109787|ref|YP_003616736.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus infernus ME] gi|295434601|gb|ADG13772.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus infernus ME] Length = 543 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 64/262 (24%), Positives = 110/262 (41%), Gaps = 43/262 (16%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 +KF+V VP +R D+ + D+ EE+ YG D+ K ++ +L + R +++ Sbjct: 314 NKFKVFVPPYRVDIFGEIDIAEEVAICYGYDKFKG---LYPEIATIGSLHPLEKRCDFIR 370 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKA 555 ++ EV+N ++E VLF + + +E+L P S + +R LLP +++ Sbjct: 371 DIMIGLGFYEVINLMLSNEE--VLFKNMRLDIKDYIEVLKPASIEHKIVRPFLLPIIMET 428 Query: 556 TGRNVDR--AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 N + I F I E ++ +N E + A + ++ E Sbjct: 429 VRINQHKELPIKIFEIGECINIKDNKIVETKNIAGAIVSNETNFNE-------------- 474 Query: 614 RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGE 669 + +AL L L+ + HP GR I E +GYFGE Sbjct: 475 -----IKSYVEAL--------LRELKLTYKIEEYEHPSFIKGRCAKILVDNE-EIGYFGE 520 Query: 670 FHPNILDFFGLSNPICGFEVYL 691 HP +L+ F + P+ FEV L Sbjct: 521 IHPEVLENFEIEFPVTAFEVIL 542 >gi|297264998|ref|XP_002808073.1| PREDICTED: LOW QUALITY PROTEIN: phenylalanyl-tRNA synthetase beta chain-like [Macaca mulatta] Length = 532 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 31/285 (10%) Query: 416 GIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + I+ Sbjct: 262 GIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQ 321 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGGGQR 529 + L + N T ++ +A+ EV+ ++ S+E L + Sbjct: 322 ---MTLPKTYTIANQFPLNKLTELLRYDMAAAGFTEVLTFALCSQEDIADKLGLDISATK 378 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQ 584 + I NP +A+ RT+LLPGLLK N + +FE+S + D+ + Sbjct: 379 AVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGAKNY 437 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 +++ A + G E L R + L D + P ++ Sbjct: 438 RHLCAVYYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIKASE 482 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + PGR I + V G G HP+++ F L+ P E+ Sbjct: 483 GPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 526 >gi|152977046|ref|YP_001376563.1| tRNA-binding domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025798|gb|ABS23568.1| t-RNA-binding domain protein [Bacillus cytotoxicus NVH 391-98] Length = 201 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/113 (37%), Positives = 67/113 (59%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 ++KI + L G E E+V+ SP F + V E++P+ D +I +++ G + +Q+ Sbjct: 72 VKKINEILAKNGFE-ERVEAD--FSPKFVVGYVAEKEKHPNADKLSICKVEVGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RGI S GM+CS +EL L D Sbjct: 128 VCGAPNVEAGQKVVVAKIGAVMP-SGMLIKPAELRGIPSAGMLCSARELELPD 179 >gi|302508555|ref|XP_003016238.1| hypothetical protein ARB_05636 [Arthroderma benhamiae CBS 112371] gi|291179807|gb|EFE35593.1| hypothetical protein ARB_05636 [Arthroderma benhamiae CBS 112371] Length = 493 Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 71/317 (22%), Positives = 140/317 (44%), Gaps = 45/317 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S + S+ II G H+ NT +V +E+ D + + + F Sbjct: 141 VIYDSKRTVCSLPPIINGDHSKITLNTRNVFMEITATDKTKLEVVNNIMVTM------FS 194 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + D I +K I+S G + + T +PR + + + +G+ + Sbjct: 195 QCTDEPFTIEPIK-----IVSEHNGESRQVP-----TLEPRTTQASIAYINQCTGLSLSG 244 Query: 422 EDSLRILERLGFSV-IGEY--DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 ++ ++L+++ S + E D +V++P R D+ +AD++E++ +G +++ Sbjct: 245 PETCKLLKKMALSAKVSETSDDTLDVTIPVTRADILHQADIMEDVAIAHGFNELPRSFPS 304 Query: 474 -----SEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 ++PLP+ ++ D R + T + L S N+S+++++ G Sbjct: 305 KSGTIAQPLPINKLGDIIRGEAAMAGWTEVLTFALCSHDE----NFSWVNRKDD-----G 355 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPE 582 +++ NP + + +RTSLLPGLLK N + ++ IFEVS V D Sbjct: 356 TTAVKLANPKTVEFQVVRTSLLPGLLKTIRENKNHSLP-IKIFEVSDVGLKDLSLERKSR 414 Query: 583 GQKYMAAGIRKGSSGIE 599 +++ AA +SG E Sbjct: 415 NERHFAAAWYGKTSGFE 431 >gi|2621860|gb|AAB85273.1| phenylalanyl-tRNA synthetase [Methanothermobacter thermautotrophicus str. Delta H] Length = 613 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 40/301 (13%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSV-PSWRQDVEEKADL 459 PR++ SE R++G+++ ++ + +L + D V+V P++R D+ + DL Sbjct: 338 PREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDL 397 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 VE I + + +I+ E + + ++ S + R V L + +M ++ S S Sbjct: 398 VENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHY 457 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV-YEN 578 + + +R +E+ PIS D + +R SLL GLL+ N + IFEV V Y N Sbjct: 458 RRMRLEEDER-VEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQ-KIFEVGDVVYIN 515 Query: 579 DTPEGQKY----MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 E + +A + S+G + K+ A +V+E Sbjct: 516 PESETRSRVVTKLACAVTHSSAG--------------------FTEIKSLAAAVVE---- 551 Query: 635 LDSLRFESGAPSWYHP----GRSGIIKTSAE--IVLGYFGEFHPNILDFFGLSNPICGFE 688 +L +E HP GR I++ + + G+FGE HP ++ F L P+ E Sbjct: 552 --NLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALE 609 Query: 689 V 689 + Sbjct: 610 I 610 >gi|332364526|gb|EGJ42297.1| tRNA binding domain protein [Streptococcus sanguinis SK355] Length = 208 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKAGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVAVASDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 ++EL D VG Sbjct: 185 RGVIELSDDQVVG 197 >gi|332523936|ref|ZP_08400188.1| tRNA binding domain protein [Streptococcus porcinus str. Jelinkova 176] gi|332315200|gb|EGJ28185.1| tRNA binding domain protein [Streptococcus porcinus str. Jelinkova 176] Length = 208 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 4/103 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + ++ + +PD D I ++ G + +Q+V GAPN VGL + A PG+ +P ++ Sbjct: 96 FVVGQIKEMVAHPDSDHLNICQVAIGSDKSVQIVAGAPNAAVGLKTIVALPGAMMPSGSL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 I K+RG++S GMMCS +EL L + I+EL A VG Sbjct: 156 IFP-GKLRGVDSYGMMCSPRELALPNAPQKRGIIELDQSALVG 197 >gi|76800473|ref|ZP_00782041.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] gi|76584327|gb|EAO61364.1| Phenylalanyl-tRNA synthetase beta chain(Phenylalanine--tRNA ligase beta chain) (PheRS) [Streptococcus agalactiae 18RS21] Length = 142 Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 62/102 (60%), Gaps = 1/102 (0%) Query: 265 HVFDASRISDVLTV-RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG 323 H FD + V R A +GEK++ LD +E DL D++VIA + + ++AG++GG+ Sbjct: 2 HAFDFDKFDGTTIVARNAENGEKLITLDGEERDLIADDLVIAVNDQPVALAGVMGGQSTE 61 Query: 324 CDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 ++ V++E A+++ +I ++ L + ++S RFE+G++ Sbjct: 62 IGSSSKTVVLEAAVFNGTSIRKTSGRLNLRSESSSRFEKGIN 103 >gi|325970493|ref|YP_004246684.1| phenylalanyl-tRNA synthetase subunit beta [Spirochaeta sp. Buddy] gi|324025731|gb|ADY12490.1| phenylalanyl-tRNA synthetase, beta subunit [Spirochaeta sp. Buddy] Length = 565 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/288 (24%), Positives = 125/288 (43%), Gaps = 27/288 (9%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +++ + G + ED + L R+G I + D +VP +R D ADL+E+++ YG Sbjct: 296 AQIHKTLGTKLSSEDVVLALHRMGIHSICDNDVIYATVPEYRNDFLHPADLIEDVMIGYG 355 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGG 526 ++ + E + Q LS + R VK ++ E++ SK + V + Sbjct: 356 LNNFEPE---MPQDFTLGRLSPAEEMGRKVKDLMVGLGFQEMMYNYLGSKREYVDNMAFP 412 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 ++ + I NP+S + +R S++P LL++ + A IFEV V D + Sbjct: 413 QEKCIFISNPMSENYEVVRPSIIPSLLESESVSA-HAPFPHKIFEVGKVAFRDEHDN--- 468 Query: 587 MAAGIRKGSSGIEGSGRL--WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + + + G S + ++D S + F K L+ +E LRF G Sbjct: 469 -SGTTTRNTLGFLASDSVMGYNDVSSLVNTLL-YFLGKEFTLAAME-----GDLRFIEGR 521 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + G++ + G FGE HP +L+ +G + P E+ LD Sbjct: 522 SARVMIGQTEV---------GVFGEIHPQVLENWGSTMPTIACEIDLD 560 >gi|256811292|ref|YP_003128661.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus fervens AG86] gi|256794492|gb|ACV25161.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus fervens AG86] Length = 548 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 52/269 (19%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYV 498 +K +V +P++R DV + D+ EE+ YG ++ E P+ T E L+ + + ++ Sbjct: 316 NKIKVYIPAYRVDVFGEIDIAEEVAIAYGYNKFTGEYPIIGTIGE----LNKLEKKCDFI 371 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLK 554 + ++ EV+N + VLF + E +E+L P S + +R S+LP L++ Sbjct: 372 REIMVGFGFYEVIN--LMLSNDDVLFKKMRIEDSNYIEVLKPASIEHRIVRKSILPLLME 429 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N + + IFE+ G + + +E R R Sbjct: 430 TLRINKHKELPQ-KIFEI---------------------------GDCVIIDENTETRSR 461 Query: 615 FVD-----LFDAKADALSVIEPFVS--LDSLRFESGAPSWYHP----GRSGIIKTSAEIV 663 V + D + + + I+ +V L L+ + ++ HP GR I +I+ Sbjct: 462 VVKKIAGVIVDNETN-FNEIKSYVEGLLRELKIKYEIDNFEHPSFIKGRCAKIIKDGKII 520 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GYFGE HP ++ F L P+ GFE+ ++ Sbjct: 521 -GYFGEIHPEVITNFELEFPVVGFELEIE 548 >gi|300122110|emb|CBK22684.2| unnamed protein product [Blastocystis hominis] Length = 567 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 97/417 (23%), Positives = 162/417 (38%), Gaps = 39/417 (9%) Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 YD V++ S+G + S+ +I G H+ D T ++ ++ D + A N I Sbjct: 172 YDSPVIPVLVDSEGTVLSLPPLINGNHSRMDYETENIFIDCTAKD-VTKASIVLNTLIAM 230 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 S Y +R + I+ + S R++TY ++ V Sbjct: 231 FSEYCDDR-------------FSAEIVDVVYEEGSVFPEGRSLTYPDFSEKHLDCSVAEC 277 Query: 415 S---GIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 G +P++ L L ++ + + + D V++P R DV D+ E++ YG + Sbjct: 278 CSTIGAAIPVDAMLADLHKMQLDATVLDADTIRVNIPITRSDVIHPCDVFEDVAIAYGYN 337 Query: 471 QI--KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 I K P T E N + ++ +A EV+ S S+ ++ + Sbjct: 338 NIQRKQPPTLTTGAEQPIN-----QLSDMIRAQIAMAGYTEVLTLSLCSRAENYAMLRLE 392 Query: 529 RE---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD-FAIFEVSHVYENDTPEGQ 584 + + + NP + + RTSLLPG+LK N A +FEVS V D Sbjct: 393 EDGLAVRLANPKTVEFEVCRTSLLPGILKTFRENKHVPYAKGVKLFEVSDVVLKDP---A 449 Query: 585 KYMAA-GIRKGSSGIEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRF-- 640 Y+ A R+ + G R + L D A A S + V+ ++ Sbjct: 450 NYVGARNERRVCAVYMGQAAQLEIIHGLMDRLMRLLDVAPAPRYSGVAEEVAEGRKQYYI 509 Query: 641 ESGAPSWYHPGRSG---IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G + PGR II E V+G+FG HP ++ F L P E+ L+ Sbjct: 510 REGEYGAFFPGRCCDIVIIDGEKEEVVGHFGVLHPQVIKNFELRYPGSALELNLEKF 566 >gi|302904077|ref|XP_003048998.1| predicted protein [Nectria haematococca mpVI 77-13-4] gi|256729932|gb|EEU43285.1| predicted protein [Nectria haematococca mpVI 77-13-4] Length = 609 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 138/598 (23%), Positives = 230/598 (38%), Gaps = 97/598 (16%) Query: 151 ELSDPIIDVSLTPNRSDCIGVRGIALDL--------------VAAGLGKLKEINISC--- 193 E P + + + NR D + GIAL+L V GKL+ I + Sbjct: 50 EQEPPQLKIEIPANRYDMLCFEGIALNLNIFRGRIEAPNYRLVEPPSGKLESITVLPEVE 109 Query: 194 ---PLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR-LKAVGLRSISAL 249 P S +I +KFD D +++ + N R R L ++G L Sbjct: 110 QVRPYVSGAILRNVKFDKDRYE--------SFIALQDKLHQNLARNRTLVSIGTHDYDTL 161 Query: 250 VDITNYVSLDRGYPSHV----FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIA 305 Y +L P + + ++ D + +K L SP VI Sbjct: 162 QGPFTYEALP---PKDIKFIPLNQTKEMDSAELMTFYENDKHLGRFLHIIRDSPVYPVIY 218 Query: 306 SDGRI-QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGV 364 RI S+ II G H+ +TT+V +E+ A L I+TD Sbjct: 219 DSNRIVGSLPPIINGDHSKITLDTTNVFMEIT-------ATDLTKLEIVTDIMVTMFSTY 271 Query: 365 DLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR----KIVFMNSEVKRLSGIDVP 420 + I+S L T T KPR +I ++NS +G+ Sbjct: 272 CAEPFTIEPVQIISEHNKLTRVTP---------TLKPRVAEVEIDYLNS----CTGLSES 318 Query: 421 IEDSLRILERLGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEP 476 E ++L ++ + + + EVS+P R DV + D++E++ YG + + ++ P Sbjct: 319 PESLCKLLSKMAYISTPSTKDSNILEVSIPPTRADVLHQCDVMEDLAVCYGYNNLPRTAP 378 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----GGGQREL 531 V L ++ + R A+ A EV+ S +++ + G + Sbjct: 379 TRSATV----GAPLMVNKLSDIIRTEAAMAGWSEVMPLILCSHDENFAWLNRKDDGNTVV 434 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE----GQKY 586 + NP +A+ +R++LLPGLLK N ++ IFEVS V+++++ E +++ Sbjct: 435 RLANPKTAEYQVVRSTLLPGLLKTIRENKGHSVP-MKIFEVSDVVFKDESQERKARNERH 493 Query: 587 MAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDL----------FDAKADALSVIEPFV-S 634 AA +SG E G L R F+ FD K + E ++ Sbjct: 494 FAAAWYGRTSGFEVVHGLLDRVLLMLRTAFITHEEGLAGKSVDFDVKENPTKPDEYWIEE 553 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 LD F +G H + E +G FG HP +L+ F L P+ E+ L+ Sbjct: 554 LDDATFFAG-----HAASVYLRLGGKERRIGEFGILHPTVLEKFDLRYPVSTLEINLE 606 >gi|119591209|gb|EAW70803.1| phenylalanine-tRNA synthetase-like, beta subunit, isoform CRA_b [Homo sapiens] Length = 276 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 63/279 (22%), Positives = 113/279 (40%), Gaps = 31/279 (11%) Query: 422 EDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + I+ + L Sbjct: 12 ENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYNNIQ---MTL 68 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG----GQRELEILN 535 + N T ++ +A+ E + ++ S+E G + + I N Sbjct: 69 PKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISN 128 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P +A+ RT+LLPGLLK N + +FE+S + D+ + +++ A Sbjct: 129 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDSNTDVGAKNYRHLCAV 187 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + G E L R + L D + P ++ + P Sbjct: 188 YYNKNPGFEIIHGLLD-------RIMQLLD--------VPPGEDKGGYVIKASEGPAFFP 232 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 GR I + V G G HP+++ F L+ P E+ Sbjct: 233 GRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSSLEI 270 >gi|224476832|ref|YP_002634438.1| hypothetical protein Sca_1349 [Staphylococcus carnosus subsp. carnosus TM300] gi|222421439|emb|CAL28253.1| conserved hypothetical protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 199 Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats. Identities = 49/130 (37%), Positives = 81/130 (62%), Gaps = 9/130 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 ++++ TL G+E +K+D+ LSP F + V + E++P+ D +IL+++ G ++E+Q+ Sbjct: 69 VDQLQQTLKDAGIE-DKLDSD--LSPKFVVGYVETKEKHPNADKLSILKVNVG-NEELQI 124 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASI 133 VCGAPNV G V A G+ +P + M++ ++RGI S+GM+CS KEL L + I Sbjct: 125 VCGAPNVEAGQKVVVAKVGAVMP-SGMVIKDAELRGIASSGMVCSMKELDLPNAPKEKGI 183 Query: 134 MELPIDAPVG 143 M L + VG Sbjct: 184 MVLSDEYQVG 193 >gi|76800999|ref|YP_326007.1| phenylalanyl-tRNA synthetase subunit beta [Natronomonas pharaonis DSM 2160] gi|121696865|sp|Q3ITU5|SYFB_NATPD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|76556864|emb|CAI48438.1| phenylalanine--tRNA ligase beta subunit [Natronomonas pharaonis DSM 2160] Length = 572 Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/298 (26%), Positives = 126/298 (42%), Gaps = 48/298 (16%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYD---KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G+D+ D + +LER G + + +EV +P++R DV AD+V+++ R +G +++ Sbjct: 302 GVDLAGTDVVDLLERSGLDAEADTEGELTYEVEIPAYRVDVLHPADIVDDVGRAFGFNEL 361 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRY---VKRVLASRAMMEVVNWSFISKEQSVLFG---- 525 EP Q D + + R+R V+ L +++N+ S+ + LF Sbjct: 362 --EP----QYPDVSTVGGRHDRSRLEDAVRNTLVGLGFEDLLNFYMTSETE--LFDRMSL 413 Query: 526 -------GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA-DFA-IFEVSHVY 576 G + I P S D + +RT LP LL N RA D A I V+ V Sbjct: 414 SPDDNAVGAREPPTITEPYSEDYTVVRTWALPSLLMVLENNTHRAYPQDLAEIGLVAGVD 473 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 E+ K + +G+ +D S E DAKA L I +D Sbjct: 474 ES------KPTNVAEHRSVAGVVAR----TDASYE--------DAKA-RLQAIGSAFGVD 514 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + PS+ GR+ + E G GE HP +L L P+ GFE LD++ Sbjct: 515 IKTPPTDHPSFID-GRTAAVVIDGEPA-GVIGELHPRVLVEHDLEVPVAGFEFRLDAL 570 >gi|25010251|ref|NP_734646.1| tRNA binding domain protein [Streptococcus agalactiae NEM316] gi|77413375|ref|ZP_00789568.1| tRNA binding domain protein [Streptococcus agalactiae 515] gi|23094603|emb|CAD45821.1| Unknown [Streptococcus agalactiae NEM316] gi|77160545|gb|EAO71663.1| tRNA binding domain protein [Streptococcus agalactiae 515] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I +++ + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIE--PTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|227831040|ref|YP_002832820.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus L.S.2.15] gi|284998535|ref|YP_003420303.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus L.D.8.5] gi|259511898|sp|C3MJ88|SYFB_SULIL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|227457488|gb|ACP36175.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus L.S.2.15] gi|284446431|gb|ADB87933.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus L.D.8.5] Length = 545 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 75/407 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D+NT D ++V Sbjct: 191 IVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + + ++ KI + E VK++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVLKSANSSQLSSPLFLHKIQNVREEYVKKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T ++L + R ++ + +E+ N+ I E+ LF + ++IL Sbjct: 344 SKYISTNYGSYDYMTLLE---RKIRELGIGAGYVEISNFVLIKDEK--LF--SNKYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYMAAGIR 592 NP++ + + +R SL+PGLL +N A +FE VY++ T G Sbjct: 397 NPVTEEYNAVRNSLIPGLLDFLSKN-QHAKFPIRVFETGDVVVYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAP----SW 647 ++++R + + D K + P L SL E + Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + GRS I E +G GE +P++L FG+ P E+Y+ I Sbjct: 492 FIEGRSASIFYENE-KMGVIGEVNPDVLIRFGIEYPAVIAELYISEI 537 >gi|319744161|gb|EFV96534.1| tRNA binding domain protein [Streptococcus agalactiae ATCC 13813] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I +++ + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIEP--TFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|77410005|ref|ZP_00786577.1| tRNA binding domain protein [Streptococcus agalactiae COH1] gi|77171387|gb|EAO74684.1| tRNA binding domain protein [Streptococcus agalactiae COH1] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I +++ + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIE--PTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|58337843|ref|YP_194428.1| phenylalanyl-tRNA synthetase (beta subunit) [Lactobacillus acidophilus NCFM] gi|227904492|ref|ZP_04022297.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus acidophilus ATCC 4796] gi|58255160|gb|AAV43397.1| phenylalanyl-tRNA synthetase (beta subunit) [Lactobacillus acidophilus NCFM] gi|227867747|gb|EEJ75168.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus acidophilus ATCC 4796] Length = 215 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 9/137 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 +D LE + L +G + D E P + V + E++PD D + I+ G + Sbjct: 68 SDDELEALNKKLAEVGFD----DKLEYGKPTLVYGYVKTCEKHPDSDHLHVTTIEVGDGE 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDD 129 E Q+VCGAPN+ G V A PG+ +P N + K+RG++S GM+CS +EL L + Sbjct: 124 EHQIVCGAPNIAQGQKVVVALPGTLMP-NGAQIWPGKLRGVDSYGMICSARELGLPHAPQ 182 Query: 130 SASIMELPIDAPVGGRL 146 IM +P VG Sbjct: 183 KRGIMVVPDSFEVGAEF 199 >gi|324992283|gb|EGC24205.1| tRNA binding domain protein [Streptococcus sanguinis SK405] gi|327459209|gb|EGF05557.1| tRNA binding domain protein [Streptococcus sanguinis SK1057] gi|327459591|gb|EGF05937.1| tRNA binding domain protein [Streptococcus sanguinis SK1] gi|328945379|gb|EGG39532.1| tRNA binding domain protein [Streptococcus sanguinis SK1087] gi|332358534|gb|EGJ36358.1| tRNA binding domain protein [Streptococcus sanguinis SK1056] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKAGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|77407914|ref|ZP_00784665.1| tRNA binding domain protein [Streptococcus agalactiae COH1] gi|77173461|gb|EAO76579.1| tRNA binding domain protein [Streptococcus agalactiae COH1] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I +++ + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIE--PTFVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|195144864|ref|XP_002013416.1| GL24130 [Drosophila persimilis] gi|194102359|gb|EDW24402.1| GL24130 [Drosophila persimilis] Length = 589 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 29/278 (10%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P +L R+ + + V +P R DV D+ E+I +G + IK Sbjct: 319 GIDEPASKLADMLTRMYLEARVDGESLVVKIPPTRHDVIHACDVYEDIAIAFGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL- 534 Q+ + L+ T ++ +A E + ++ S++ + + +E L Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDD--IGRKLNKSIEALP 433 Query: 535 -----NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 NP + + +RT+LLPGLLK N + +FE+S D Sbjct: 434 AVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDAVVAD---------- 482 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDS-LRFESGAP 645 K G RL + + F L D LSV S+D ES Sbjct: 483 --EKTEVGARNERRLCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKTASVDKGYYLESTED 540 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + Y PGR + ++V+G G HP +L F L+ P Sbjct: 541 ASYFPGRCANVMYD-KVVIGKIGVLHPTVLHAFDLTTP 577 >gi|329116747|ref|ZP_08245464.1| tRNA binding domain protein [Streptococcus parauberis NCFD 2020] gi|326907152|gb|EGE54066.1| tRNA binding domain protein [Streptococcus parauberis NCFD 2020] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 5/109 (4%) Query: 39 EALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSC 96 E +SP F I ++ + +PD D I ++ G+ + +Q+V GAPN +GL + A PG+ Sbjct: 90 ETVSPVFVIGQITEMVAHPDSDHLNICQVAIGEDKTVQIVAGAPNAALGLKTIVALPGAM 149 Query: 97 IPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 +P ++I K+RG +S GMMCS +EL L + I+EL A VG Sbjct: 150 MPSGSLIFP-GKLRGQDSYGMMCSPRELALPNAPQKRGIIELDDSAVVG 197 >gi|327467001|gb|EGF12515.1| tRNA binding domain protein [Streptococcus sanguinis SK330] Length = 208 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVTILNQELSKAGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|125775159|ref|XP_001358831.1| GA19072 [Drosophila pseudoobscura pseudoobscura] gi|54638572|gb|EAL27974.1| GA19072 [Drosophila pseudoobscura pseudoobscura] Length = 589 Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 68/278 (24%), Positives = 108/278 (38%), Gaps = 29/278 (10%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P +L R+ + + V +P R DV D+ E+I +G + IK Sbjct: 319 GIDEPASKLADMLTRMYLEARVDGESLVVKIPPTRHDVIHACDVYEDIAIAFGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL- 534 Q+ + L+ T ++ +A E + ++ S++ + + +E L Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDD--IGRKLNKSIEALP 433 Query: 535 -----NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 NP + + +RT+LLPGLLK N + +FE+S D Sbjct: 434 AVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDAVVAD---------- 482 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDS-LRFESGAP 645 K G RL + + F L D LSV S+D ES Sbjct: 483 --EKTEVGARNERRLCAVNCNKTAGFEVVHGLLDRVMQLLSVPWKTASVDKGYYLESTED 540 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + Y PGR + ++V+G G HP +L F L+ P Sbjct: 541 ASYFPGRCANVMYD-KVVIGKIGVLHPTVLHAFDLTTP 577 >gi|313227160|emb|CBY22307.1| unnamed protein product [Oikopleura dioica] Length = 576 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 49/304 (16%) Query: 411 VKRLSGI--DVPIEDSLRILERLGFSVIGEYDKFE-----VSVPSWRQDVEEKADLVEEI 463 ++R G+ DV E ++L R+G ++ Y ++E +P R D+ D++E++ Sbjct: 297 IRRQIGLPQDVTAETMAKLLSRMG--LVSSYIRYENEKIISRIPPTRHDILHPCDIMEDV 354 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFISKE--- 519 Y +++ P V + L ++ + RV +A+ E + ++ +S+ Sbjct: 355 AVAYDFNKLVMTMPPTNTVAKQ----LPINKLCDLLRVDVAAAGFCEALTFALVSRADIG 410 Query: 520 QSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + F E + + NP +A+ RT LLPGLLK T N + +FEVS V Sbjct: 411 EKMGFDKLPAEAVTVSNPKTAEFQVCRTGLLPGLLKTTQANRKLPLP-LKLFEVSDVVLK 469 Query: 577 ENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 +N T G +++M+A +SG E L R ++L + Sbjct: 470 DNSTHTGCRNERHMSALCYSNTSGFEVIHGLLD-------RVMELLEVPPCEAG------ 516 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFE 688 S D + G+ Y + A+I L G G HPN L F L NP+ FE Sbjct: 517 SADGYYIKKGSSPTY-------FQVCADIYLWNEKVGQMGVIHPNTLKAFDLPNPVSAFE 569 Query: 689 VYLD 692 + L+ Sbjct: 570 INLE 573 >gi|218899849|ref|YP_002448260.1| putative tRNA binding domain protein [Bacillus cereus G9842] gi|218544896|gb|ACK97290.1| putative tRNA binding domain protein [Bacillus cereus G9842] Length = 204 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 75 VEKINEVLAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 129 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 130 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 182 >gi|30022764|ref|NP_834395.1| tRNA-binding domain-containing protein [Bacillus cereus ATCC 14579] gi|228960966|ref|ZP_04122596.1| hypothetical protein bthur0005_44190 [Bacillus thuringiensis serovar pakistani str. T13001] gi|229048401|ref|ZP_04193968.1| hypothetical protein bcere0027_43680 [Bacillus cereus AH676] gi|229112156|ref|ZP_04241698.1| hypothetical protein bcere0018_43990 [Bacillus cereus Rock1-15] gi|229129973|ref|ZP_04258937.1| hypothetical protein bcere0015_44130 [Bacillus cereus BDRD-Cer4] gi|229147262|ref|ZP_04275614.1| hypothetical protein bcere0012_43940 [Bacillus cereus BDRD-ST24] gi|29898323|gb|AAP11596.1| tRNA binding domain protein [Bacillus cereus ATCC 14579] gi|228636199|gb|EEK92677.1| hypothetical protein bcere0012_43940 [Bacillus cereus BDRD-ST24] gi|228653417|gb|EEL09291.1| hypothetical protein bcere0015_44130 [Bacillus cereus BDRD-Cer4] gi|228671272|gb|EEL26574.1| hypothetical protein bcere0018_43990 [Bacillus cereus Rock1-15] gi|228722916|gb|EEL74294.1| hypothetical protein bcere0027_43680 [Bacillus cereus AH676] gi|228798683|gb|EEM45666.1| hypothetical protein bthur0005_44190 [Bacillus thuringiensis serovar pakistani str. T13001] Length = 201 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|198426230|ref|XP_002122110.1| PREDICTED: similar to phenylalanine-tRNA synthetase-like [Ciona intestinalis] Length = 600 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 95/406 (23%), Positives = 163/406 (40%), Gaps = 52/406 (12%) Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 S G + S+ II G H+ T +VL+E+ D +T ++ + V Sbjct: 227 SKGVVLSMPPIINGDHSKIKLTTKNVLIEITATD-------------LTKAKVALDTIVT 273 Query: 366 LQGMIPVLKHIVSLILSLCG-GTASDICIARNITYKPRKIVF--MNSEVKRLSGIDVPIE 422 + K V + C GT + +++Y+ + +NS++ G+D+ E Sbjct: 274 MFSCHCEDKFTVEPVDINCHDGTVME---TPSLSYRQETVTAGNLNSKI----GVDLKAE 326 Query: 423 DSLRILERLGF-SVIGEYDKFE--VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + +L ++ S + +K E V++P R DV D+VE+ G D I + P Sbjct: 327 EIADLLTKMCLRSEVTNVEKGEILVTIPPTRSDVIHACDIVEDCAIALGFDNI-VQTFPR 385 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQRE---LEI 533 + + LS++ S ++ LA EV+ +S S + + + G + E ++I Sbjct: 386 SVTVGGQQLSMKMSER--LRPELAGAGFTEVLTFSLCSSDDVGKKMRQVGKEMENLAVQI 443 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQKYMA 588 NP + + +RTSLLPGLLK N + IFE+ V D ++ + Sbjct: 444 SNPATLEFQVVRTSLLPGLLKTVASNRKMPLP-IKIFEIQEVVLKDGSRETGARNERRIG 502 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 A G E L R + + + K ++ +P +S Y Sbjct: 503 AVCYNKLPGFEVIHGLLD-------RIMQILEVKWES---NDPKYKDKGYCIKSAEDPSY 552 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 PGR I + V G G HP ++ F L P E+ L+S Sbjct: 553 FPGRCAEIYVRGKAV-GKLGVLHPEVISNFDLVCPASALEINLESF 597 >gi|228923449|ref|ZP_04086734.1| hypothetical protein bthur0011_44260 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228954971|ref|ZP_04116988.1| hypothetical protein bthur0006_43360 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072196|ref|ZP_04205404.1| hypothetical protein bcere0025_43610 [Bacillus cereus F65185] gi|229081950|ref|ZP_04214441.1| hypothetical protein bcere0023_45770 [Bacillus cereus Rock4-2] gi|229192979|ref|ZP_04319935.1| hypothetical protein bcere0002_46300 [Bacillus cereus ATCC 10876] gi|228590426|gb|EEK48289.1| hypothetical protein bcere0002_46300 [Bacillus cereus ATCC 10876] gi|228701327|gb|EEL53822.1| hypothetical protein bcere0023_45770 [Bacillus cereus Rock4-2] gi|228710934|gb|EEL62901.1| hypothetical protein bcere0025_43610 [Bacillus cereus F65185] gi|228804698|gb|EEM51300.1| hypothetical protein bthur0006_43360 [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228836175|gb|EEM81531.1| hypothetical protein bthur0011_44260 [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 201 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|228903213|ref|ZP_04067346.1| hypothetical protein bthur0014_43780 [Bacillus thuringiensis IBL 4222] gi|228941876|ref|ZP_04104421.1| hypothetical protein bthur0008_45120 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228967795|ref|ZP_04128810.1| hypothetical protein bthur0004_45840 [Bacillus thuringiensis serovar sotto str. T04001] gi|228974803|ref|ZP_04135367.1| hypothetical protein bthur0003_45550 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981395|ref|ZP_04141695.1| hypothetical protein bthur0002_45560 [Bacillus thuringiensis Bt407] gi|228778595|gb|EEM26862.1| hypothetical protein bthur0002_45560 [Bacillus thuringiensis Bt407] gi|228784901|gb|EEM32916.1| hypothetical protein bthur0003_45550 [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228791889|gb|EEM39476.1| hypothetical protein bthur0004_45840 [Bacillus thuringiensis serovar sotto str. T04001] gi|228817781|gb|EEM63861.1| hypothetical protein bthur0008_45120 [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228856387|gb|EEN00914.1| hypothetical protein bthur0014_43780 [Bacillus thuringiensis IBL 4222] Length = 201 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|313125095|ref|YP_004035359.1| phenylalanyl-tRNA synthetase subunit beta [Halogeometricum borinquense DSM 11551] gi|312291460|gb|ADQ65920.1| phenylalanyl-tRNA synthetase beta subunit [Halogeometricum borinquense DSM 11551] Length = 592 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 112/273 (41%), Gaps = 53/273 (19%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 +EVS+P +R DV DLV+++ R YG ++++ + V + S + R Sbjct: 352 YEVSIPPYRVDVLHPLDLVDDVGRAYGFNELQPRYPNVGTVGGRHERSRLEDAAR---NS 408 Query: 502 LASRAMMEVVNWSFISKEQ----------SVLFGGGQRELEILNPISADMSNMRTSLLPG 551 L +++N+ S+E+ S + GGG EI P S D + +RT LP Sbjct: 409 LVGLGFEDMLNFHMTSEEEVYDRMGIEAGSEVLGGGDT-AEITGPYSEDYTILRTWALPS 467 Query: 552 LLKATGRNVDRAI-ADFAIFEVSHVYENDTP-----EGQKYMAAGIRKGSSGIEGSGRLW 605 L+ N RA D A E+ V E D + ++++A + + + E Sbjct: 468 LMMVLENNTHRAYPQDLA--EIGLVAERDDSVNTRVDERRHVAGVLARHDATFE------ 519 Query: 606 SDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAE 661 DAKA S+ F + E P+ HP GR+ + E Sbjct: 520 --------------DAKARLQSLCRDFGA------ELKTPATDHPSFIDGRAASVVVDGE 559 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 V G GE HP +L L P+ FE LD++ Sbjct: 560 NV-GVVGEIHPRVLVEHDLELPVAAFEFDLDAL 591 >gi|313241258|emb|CBY33538.1| unnamed protein product [Oikopleura dioica] Length = 576 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 49/304 (16%) Query: 411 VKRLSGI--DVPIEDSLRILERLGFSVIGEYDKFE-----VSVPSWRQDVEEKADLVEEI 463 ++R G+ DV E ++L R+G ++ Y ++E +P R D+ D++E++ Sbjct: 297 IRRQIGLPQDVTAETMAKLLSRMG--LVSSYIRYENEKIISRIPPTRHDILHPCDIMEDV 354 Query: 464 LRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFISKE--- 519 Y +++ P V + L ++ + RV +A+ E + ++ +S+ Sbjct: 355 AVAYDFNKLVMTMPPTNTVAKQ----LPINKLCDLLRVDVAAAGFCEALTFALVSRADIG 410 Query: 520 QSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-- 576 + + F E + + NP +A+ RT LLPGLLK T N + +FEVS V Sbjct: 411 EKMGFDKLPAEAVTVSNPKTAEFQVCRTGLLPGLLKTTQANRKLPLP-LKLFEVSDVVLK 469 Query: 577 ENDTPEG---QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 +N T G +++M+A +SG E L R ++L + Sbjct: 470 DNSTHTGCRNERHMSALCYSNTSGFEVIHGLLD-------RVMELLEVPPCEAG------ 516 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVL-----GYFGEFHPNILDFFGLSNPICGFE 688 S D + G+ Y + A+I L G G HPN L F L NP+ FE Sbjct: 517 SADGYYIKKGSSPTY-------FQVCADIYLWNEKVGQMGVIHPNTLKAFDLPNPVSAFE 569 Query: 689 VYLD 692 + L+ Sbjct: 570 INLE 573 >gi|315427612|dbj|BAJ49210.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Caldiarchaeum subterraneum] Length = 557 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 72/305 (23%), Positives = 125/305 (40%), Gaps = 40/305 (13%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADL 459 +P +++ VKRL+G+ + + ++ R+L R+G + + V P R D+ DL Sbjct: 273 RPLEMMLDMELVKRLTGLQLSLREATRLLRRMGMEPRVKGKRLRVLYPRHRADILHPVDL 332 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNL--SLQQSRTRY--VKRVLASRAMMEVVNWSF 515 VE+I YG + +T V + N SL+ T Y V + EV N Sbjct: 333 VEDIAIAYGYNN-------MTPVAPQSNTYGSLRPQTTFYEKVAETMLGLGFTEVHNL-M 384 Query: 516 ISKEQSVLFGGGQRELE---ILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD--FAIF 570 ++ EQ+ G E+E + NP + + + +RTSL+P LL N D F + Sbjct: 385 LTNEQTHYQMSGLDEIEHVTLANPATREYTMVRTSLIPSLLATLANNTDNLYPQRIFELG 444 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADAL-SVI 629 ++ H+ E PE M + G +S+ + L K + + + + Sbjct: 445 DIIHI-EPAAPEKTVRMKKLAAAIAYAEAG----YSEAKSVLDELLKLLQLKPEYIPATM 499 Query: 630 EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 F+ GR + V G GE P +L+ FG+ P+ FE+ Sbjct: 500 GTFIE----------------GRCAALTIDGSKV-GVVGEVSPTVLENFGIEMPVTLFEI 542 Query: 690 YLDSI 694 ++ + Sbjct: 543 EIEKL 547 >gi|229163687|ref|ZP_04291634.1| hypothetical protein bcere0009_44530 [Bacillus cereus R309803] gi|228619749|gb|EEK76628.1| hypothetical protein bcere0009_44530 [Bacillus cereus R309803] Length = 201 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|210619514|ref|ZP_03292043.1| hypothetical protein CLONEX_04277 [Clostridium nexile DSM 1787] gi|210148845|gb|EEA79854.1| hypothetical protein CLONEX_04277 [Clostridium nexile DSM 1787] Length = 175 Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats. Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 9/150 (6%) Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT- 704 ++ HPGR I ++V GY GE HP + D +G+ G Y+ I + + T Sbjct: 21 TFLHPGRQANIIYGGKVV-GYLGEVHPEVADIYGI-----GTRAYVAVIDMPEVVELATF 74 Query: 705 -KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNII-KNVDRLIDDVTVFDVFQGKSLGEGK 762 +K ++ V RD++ +V + I G + +I K ++ +FD+++G + G Sbjct: 75 DRKYEGIAKYPAVTRDISMVVPKEILVGQIEEVIAKKGGAYLESYKLFDLYEGAQIKAGF 134 Query: 763 KSVAIQVLIQPLKDTFRDDDIRILMDRIVE 792 KSVA ++ + T + D+ M +I++ Sbjct: 135 KSVAYSIVFRAKDKTLEEADVTSAMTKILK 164 >gi|206969895|ref|ZP_03230849.1| putative tRNA binding domain protein [Bacillus cereus AH1134] gi|218234547|ref|YP_002369490.1| putative tRNA binding domain protein [Bacillus cereus B4264] gi|206735583|gb|EDZ52751.1| putative tRNA binding domain protein [Bacillus cereus AH1134] gi|218162504|gb|ACK62496.1| putative tRNA binding domain protein [Bacillus cereus B4264] Length = 204 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 75 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 129 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 130 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 182 >gi|312136599|ref|YP_004003936.1| phenylalanyl-tRNA synthetase beta subunit [Methanothermus fervidus DSM 2088] gi|311224318|gb|ADP77174.1| phenylalanyl-tRNA synthetase beta subunit [Methanothermus fervidus DSM 2088] Length = 554 Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 122/582 (20%), Positives = 230/582 (39%), Gaps = 98/582 (16%) Query: 142 VGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIP 201 +G + DY D ++ V PNR D V GI+ L LG E+ I +S Sbjct: 30 LGCDIEDY---DDNVLKVEFFPNRPDNFSVEGISRSL-KGFLGM--ELGIPKYTIKDS-G 82 Query: 202 LEIKFDLDDSSLCKGFAMCCVKGVRNNVAP-----------NWM--RQRLK-AVGLRSIS 247 ++ D S + A+C VK + N +W+ R R K A+GL + Sbjct: 83 FKVFVDEKISKIRPFIAVCIVKNLEFNEDKVKQIMEFQEDLHWVMGRDRKKVAIGLHNYD 142 Query: 248 ALVDITNYVSLDRGYPSHV-FDASRISDVLTVR----RACSGEKILALDNQEYDLSPDNV 302 + Y + D P +V F + +T+R + +G K L Q Y P + Sbjct: 143 VVTPPFYYKAAD---PDNVAFVPLNSQEKMTLREILNKHETGRKYAHLLKQ-YKKYP--L 196 Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ D + S+ II + D+NT +VL++V Sbjct: 197 ILDDDDNVLSMPPIINAELTKIDENTKNVLIDVT-------------------------- 230 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICI------ARNITYKPRKIVFMNSEVKRLSG 416 G D + ++ + +I+S + GG + I + P+ + VK++ G Sbjct: 231 GTDFKAVMQTV-NILSTSFAESGGKIETVEIIYPDKKVKTPDLTPKTKLLNVENVKKIIG 289 Query: 417 IDVPIEDSLRIL--ERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 D+ +++ L R+ I + DK +V +P++R D+ + D++E + Y + IK Sbjct: 290 HDISLDEIKHSLLKARMDVEEISD-DKLKVYIPAYRVDILHEVDIIENVAIQYRFNNIKP 348 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 + V ++ + + R + L + +M ++ + + + + R +++ Sbjct: 349 RLPKVATVGEEDPWYISDNVLRKIMVGLGFQEIMSLMLTNEDTHYKKMRLKEDDR-VQVS 407 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKG 594 PIS D + +R SLL L++ N + IFEV D +K Sbjct: 408 QPISEDRTMIRKSLLGNLMEFLRDNRHAELPQ-KIFEVGEAVYID------------KKS 454 Query: 595 SSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG--R 652 + ++ +L F ++ K+ ++I+ +L ++ HP + Sbjct: 455 ETKVKSVKKLAGAVMHSNTNFTEI---KSIVATIIK------NLGYKMELEKTNHPSFIK 505 Query: 653 SGIIKTSAEI-----VLGYFGEFHPNILDFFGLSNPICGFEV 689 + K A++ + G FGE HP ++ F L P+ FE+ Sbjct: 506 GRVAKVRAKMKDKASIEGVFGEIHPEVIINFDLEYPVTAFEL 547 >gi|227890549|ref|ZP_04008354.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus salivarius ATCC 11741] gi|227867487|gb|EEJ74908.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus salivarius ATCC 11741] Length = 216 Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 39 EALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI 97 +A F + V S++ +PD D I ++ QE+Q+VCGAPN+ G V A G+ + Sbjct: 92 DANPKFVVGYVESMKEHPDSDHLHITKVKVDNDQELQIVCGAPNIDEGQKVVVAKVGAMM 151 Query: 98 PENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELP 137 P MI K+RG+ES GM+CS +EL L + I+ LP Sbjct: 152 PNGAMIFP-GKLRGVESMGMICSARELELPNAPQKRGILVLP 192 >gi|218197256|gb|EEC79683.1| hypothetical protein OsI_20948 [Oryza sativa Indica Group] Length = 596 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 30/256 (11%) Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + VSVP R D+ DLVE++ YG + + KS+P +T + +Q R+ Sbjct: 353 RISVSVPPTRSDILHARDLVEDVAIAYGYNNVPKSKPKCMT-------IGGRQPLNRFSD 405 Query: 500 RVLASRA---MMEVVNWSFISKEQSV-LFGGGQ---RELEILNPISADMSNMRTSLLPGL 552 ++ A A MEV+ ++ S+E++ + Q + + I NP +++ +RTSL+ L Sbjct: 406 KLRAEVARAGYMEVLTFTLCSREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCL 465 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK-GSSGIEGSGRLWSDKSEE 611 LK N+D IFEV V D G R G+S L+ +K Sbjct: 466 LKTLKHNIDHP-RPIKIFEVGDVVTLD----------GSRDVGASNNRQLAALYCNKQSG 514 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 + L D + + P + + + P R I S +GY G H Sbjct: 515 FEEIMGLVDRIVNVVRA--PHIKFGQNYYVPTNEPEFFPKRQCKIVMSDGKQIGYLGIVH 572 Query: 672 PNILDFFGLSNPICGF 687 +L FG+ +P C F Sbjct: 573 AEVLRKFGIPDP-CTF 587 >gi|195978939|ref|YP_002124183.1| tRNA binding domain protein [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195975644|gb|ACG63170.1| tRNA binding domain protein [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 208 Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats. Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 8/125 (6%) Query: 30 LEVEKVDNREALSP---FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVG 85 L EK R SP F + +++ + +PD D I ++ + +Q+V GAPN VG Sbjct: 79 LAQEKFTERLEASPDPVFVVGQIIEMIPHPDSDHLNICQVQIAPDRAVQIVAGAPNAAVG 138 Query: 86 LLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 L + A PG+ +P ++I K+RG +S GMMCS +EL L + I+EL DA V Sbjct: 139 LKTIVALPGAMMPSGSLIFP-GKLRGKDSFGMMCSPRELALPNAPQKRGIIEL-CDAAVV 196 Query: 144 GRLSD 148 G D Sbjct: 197 GEAFD 201 >gi|194909828|ref|XP_001982018.1| GG12360 [Drosophila erecta] gi|190656656|gb|EDV53888.1| GG12360 [Drosophila erecta] Length = 589 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 112/289 (38%), Gaps = 33/289 (11%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P E +L R+ + + D V +P R DV D+ E++ YG + IK Sbjct: 319 GIDEPAEKLADMLTRMYLAAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL- 534 Q+ + L+ T ++ +A E + ++ S++ + + +E L Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDD--IGRKLNKNIEALP 433 Query: 535 -----NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 NP + + +RT+LLPGLLK N + +FE+S V D Sbjct: 434 AVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVVADD--------- 483 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLR---FESG 643 G RL + + F L D LSV P+ + + ++ Sbjct: 484 ---STEVGARNERRLCAVNCNKTAGFEVVHGLLDRVMQLLSV--PWKTASGTKGYYLQAT 538 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y PGR + +V+G G HP +L F L+ P E ++ Sbjct: 539 EDPSYFPGRCANVMYDG-VVIGKIGVLHPTVLQAFELTTPCSAVEFTIE 586 >gi|77410064|ref|ZP_00786608.1| tRNA binding domain protein [Streptococcus agalactiae COH1] gi|77171328|gb|EAO74653.1| tRNA binding domain protein [Streptococcus agalactiae COH1] Length = 164 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I +++ + +Q+VCGAPN VGL Sbjct: 39 GFEDSLVNNIEPT--FVVAQIKEMIDHPDSDHLHICQVEINDGKTVQIVCGAPNASVGLK 96 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 97 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 141 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 142 GIIELSDQVI 151 >gi|326942478|gb|AEA18374.1| tRNA-binding domain-containing protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 204 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 75 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 129 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 130 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 182 >gi|308510658|ref|XP_003117512.1| CRE-FARS-3 protein [Caenorhabditis remanei] gi|308242426|gb|EFO86378.1| CRE-FARS-3 protein [Caenorhabditis remanei] Length = 606 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 85/422 (20%), Positives = 160/422 (37%), Gaps = 84/422 (19%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q + + P V+ +G + S+ II G+H+ T +V +E Sbjct: 231 QNHPVYP--VIYDKNGVVCSMPPIINGEHSKITLKTKNVFIEAT---------------- 272 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN------------ITYK 400 D Q VL IV+L C + + ++Y Sbjct: 273 ----------ATDKQKAFVVLDTIVTLFSQYCSKPFTVEQVEVVYEETGVKELYPLLSY- 321 Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADL 459 R++ E+ GI++ E+ +L ++ + + +V VP R D+ D+ Sbjct: 322 -REMTVTTPEINTKIGINLKDEEMATLLNKMSLKAEVVAKETLKVVVPPTRHDILHACDV 380 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV---LASRAMMEVVNWSFI 516 E++ YG + + +T++ + +++ + + +A+ E +N++ Sbjct: 381 AEDVGVAYGYNNL------ITRLPESNTVAVAFPINKLCDNLRIEIAAAGWTEALNFALC 434 Query: 517 SKEQSVLFGGGQRE-------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAI 569 S++ R+ + I NP + + RTSLLPGLLK N D + + Sbjct: 435 SRDD---ISAKLRQPDALAQAVHIGNPKTLEFQVARTSLLPGLLKTLASNRDMPLP-LKL 490 Query: 570 FEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 FE+ + D+ ++ +AA ++G E + + R +++ AK Sbjct: 491 FELQDIIVKDSSTDVGARNERRLAAVYYNKAAGFE----IIQGFLDRMMRMLNVNPAKDG 546 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 IE + Y PGR I ++LG+ G HP ++ FGL+ P Sbjct: 547 TGYYIE-----------ADENPTYFPGRCAKIIGPKGVLLGHIGALHPEVITSFGLTLP- 594 Query: 685 CG 686 CG Sbjct: 595 CG 596 >gi|229093793|ref|ZP_04224892.1| hypothetical protein bcere0021_45170 [Bacillus cereus Rock3-42] gi|228689678|gb|EEL43486.1| hypothetical protein bcere0021_45170 [Bacillus cereus Rock3-42] Length = 201 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|326524952|dbj|BAK04412.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 369 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 39/265 (14%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V VP R DV DL E++ YG + + KS+P +T + +Q R+ ++ Sbjct: 129 VYVPPTRSDVLHARDLAEDVAIAYGYNNVPKSKPKSMT-------IGGRQPLNRFSDKIR 181 Query: 503 ASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKA 555 A A MEV+ + S E++ G + + I NP +++ +R+SL+ LLK Sbjct: 182 AEVARAGYMEVLTFVLTSHEENFDMLNRTDDGNKAVIIANPRTSEFEVVRSSLMSCLLKT 241 Query: 556 TGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 N+D IFEV V DT + +AA +SG E L Sbjct: 242 LKHNIDHP-RPIKIFEVGDVVSLDTSRDVGASNNRRLAALYCNSNSGFEEIMGLVD---- 296 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGE 669 R V + A P ++ + S P ++ + I+ + + V GYFG Sbjct: 297 ---RIVKIVSA---------PHINFGQTYYVPSSEPEFFTKRQCKIVMSDGKQV-GYFGI 343 Query: 670 FHPNILDFFGLSNPICGFEVYLDSI 694 H +L FG+ +P E+ ++++ Sbjct: 344 VHAEVLRKFGIPDPCTFVEIDIEAL 368 >gi|50553754|ref|XP_504288.1| YALI0E22979p [Yarrowia lipolytica] gi|49650157|emb|CAG79887.1| YALI0E22979p [Yarrowia lipolytica] Length = 593 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 130/576 (22%), Positives = 228/576 (39%), Gaps = 100/576 (17%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + + GIA L V G ++ EI ++ P S LE+ + + + Sbjct: 49 PQLKIEIPANRYDMLCIEGIAQALNVFLGRAEVPEIKLTKP----SKMLELTIHPETAEV 104 Query: 214 CKGFAMCCVKGV-------------RNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 A ++ V + + N R R L A+G +V Y Sbjct: 105 RPYAAAAILRNVTLDQRKYESFISLQEKLHSNICRGRQLVAIGTHDFDKMVQDGPY---- 160 Query: 260 RGYPSHVFDASRISDV-LTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIG 318 Y + + ++S V L + +GE ++ ++ +L + I D + I+ Sbjct: 161 -AYKAFKPNDPKMSFVPLNQTKELTGEGVMEFYEKDKNLG-KFLYIIKDAPVYPY--IVM 216 Query: 319 GKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVS 378 G DDNT L + D ++ KN+ I G D + VL IV+ Sbjct: 217 G-----DDNTVCSLPPIINSDKTKVSPDTKNIFIEV-------TGTDKTRLEIVLSQIVA 264 Query: 379 LILSLCGGTASDICIARNITYKPRKIV----------------FMNSEV---KRLSGIDV 419 C A T +P K+V M +E+ K G+D+ Sbjct: 265 AFSEYC---------AEPFTVEPLKVVSEHNGETRITPEMTPRVMQAEIPYIKSCLGLDL 315 Query: 420 PIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEP 476 +D +++L ++ S D +V++P R D+ + D++E+ YG + + K+ P Sbjct: 316 SADDIIKLLAKMSLQASKTSNPDVLDVAIPPTRSDILHQCDIMEDAAIGYGFNSLPKTLP 375 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE---LEI 533 + V + L + V+R +A EV+ + S +++ F + E + + Sbjct: 376 MKSATVGKPQ---LINKVSDIVRREVAMSGWAEVMPLTLCSHDENFAFLNRKDEGQAVHL 432 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPEGQKY----MA 588 NP + + +RTSLLPG+LK N ++ +FE V+++++ E + Y Sbjct: 433 ANPKTQEYQVIRTSLLPGILKTIRENKKHSLP-IKVFETGDVVFKDESLERKSYNQRNFG 491 Query: 589 AGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A +SG E G L R +++ IE ES + ++ Sbjct: 492 AVYSGKTSGFETVHGLLGRLMQMLRVSWIENPKESTSRGYWIE----------ESHSETF 541 Query: 648 YHPGRSGII----KTSAEI-VLGYFGEFHPNILDFF 678 + PGR I K AE V+G G HPN+L F Sbjct: 542 F-PGRGATIHLRTKDGAEAKVIGEMGILHPNVLAKF 576 >gi|229579921|ref|YP_002838320.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus Y.G.57.14] gi|229581418|ref|YP_002839817.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus Y.N.15.51] gi|259511900|sp|C3NMS5|SYFB_SULIN RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|259511901|sp|C3N8B1|SYFB_SULIY RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|228010636|gb|ACP46398.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus Y.G.57.14] gi|228012134|gb|ACP47895.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus Y.N.15.51] Length = 545 Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 92/407 (22%), Positives = 161/407 (39%), Gaps = 75/407 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D+NT D ++V Sbjct: 191 IVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + + ++ KI + E VK++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVLKSANSSQLSSPLFLHKIQNVREEYVKKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T ++L + R ++ + +E+ N+ I E+ LF + ++IL Sbjct: 344 SKYISTNYGSYDYMTLLE---RKIRELGIGAGYVEISNFVLIKDEK--LF--SNKYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYMAAGIR 592 NP++ + + +R SL+PGLL +N A +FE VY++ T G Sbjct: 397 NPVTEEYNAVRDSLIPGLLDFLSKN-QHAKFPIRVFETGDVVVYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAP----SW 647 ++++R + + D K + P L SL E + Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + GRS I E +G GE +P++L FG+ P E+Y+ I Sbjct: 492 FIEGRSASIFYENE-KMGVIGEVNPDVLIRFGIEYPAVIAELYISEI 537 >gi|90961460|ref|YP_535376.1| tRNA-binding domain-containing protein [Lactobacillus salivarius UCC118] gi|90820654|gb|ABD99293.1| tRNA binding domain protein [Lactobacillus salivarius UCC118] Length = 216 Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 4/102 (3%) Query: 39 EALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCI 97 +A F + V S++ +PD D I ++ QE+Q+VCGAPN+ G V A G+ + Sbjct: 92 DANPKFVVGYVESMKEHPDSDHLHITKVKVDNDQELQIVCGAPNIDEGQKVVVAKVGAMM 151 Query: 98 PENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELP 137 P MI K+RG+ES GM+CS +EL L + I+ LP Sbjct: 152 PNGAMIFP-GKLRGVESMGMICSARELELPNAPQKRGILVLP 192 >gi|326925809|ref|XP_003209101.1| PREDICTED: phenylalanyl-tRNA synthetase beta chain-like, partial [Meleagris gallopavo] Length = 557 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 90/415 (21%), Positives = 151/415 (36%), Gaps = 75/415 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S G + S+ II G H+ T +V +E Sbjct: 191 VIFDSSGVVLSMPPIINGDHSKISLKTRNVFIECT------------------------- 225 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D+ VL IV++ C A ++ T+ ++ + +VK Sbjct: 226 -GTDMTKAKIVLDIIVAMFSEYCEKQFTVEAVEVIYPNGKTHIYPELAYRKEKVKPELIN 284 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI ++L R+ S + G + E+ +P R DV D+VE+ YG + Sbjct: 285 KKLGISETPSSLAKLLTRMCLSSHITGNGNNIEIEIPPTRADVIHACDIVEDAAIAYGYN 344 Query: 471 QIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 I+ + LPL ++ T ++ LA+ E + ++ S E Sbjct: 345 NIQMVIPKTYTIANQLPLNKL------------TELLRLDLAAAGFTEALTFALCSTEDI 392 Query: 522 VLFGG----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 G + I NP +A+ RT+LLPGLLK N + +FE+S V Sbjct: 393 ADKLGMDISATNAVHIANPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVV 451 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 D + G+ ++ +KS L D L V P + Sbjct: 452 KDLTKDV---------GARNYRHLCAIYYNKSPGFEIIHGLLDRVMQLLEV--PPNEENG 500 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ S + PGR I + V G G HP+++ F L+ P E+ ++ Sbjct: 501 YTIKATEGSAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMPCSALEINIE 554 >gi|324990448|gb|EGC22386.1| tRNA binding domain protein [Streptococcus sanguinis SK353] Length = 208 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKEGFPADLVNDSQ--PKFVVGQIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|157693384|ref|YP_001487846.1| PheRS aminoacylate phenylalanine transfer RNA [Bacillus pumilus SAFR-032] gi|157682142|gb|ABV63286.1| possible PheRS aminoacylate phenylalanine transfer RNA [Bacillus pumilus SAFR-032] Length = 201 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V E++P+ D I ++D G + +Q+VCGAPNV G V A G+ IP Sbjct: 92 LSPKFVVGYVKEKEKHPNADKLNICQVDVGD-ETLQIVCGAPNVDQGQYVVVAKVGAVIP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +I+ ++RG+ S+GM+CS KEL L D A Sbjct: 151 -SGLIIKDAELRGVPSSGMICSAKELDLPDAPA 182 >gi|229186948|ref|ZP_04314102.1| hypothetical protein bcere0004_44890 [Bacillus cereus BGSC 6E1] gi|228596502|gb|EEK54168.1| hypothetical protein bcere0004_44890 [Bacillus cereus BGSC 6E1] Length = 201 Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 72 VEKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|315425004|dbj|BAJ46679.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Caldiarchaeum subterraneum] gi|315425700|dbj|BAJ47356.1| phenylalanyl-tRNA synthetase beta chain [Candidatus Caldiarchaeum subterraneum] Length = 557 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 132/573 (23%), Positives = 225/573 (39%), Gaps = 100/573 (17%) Query: 156 IIDVSLTPNRSDCIGVRGIALDL-----VAAGLGK----LKEINISCPLSSESIPLEI-- 204 I+ V PNR D V G+A L + GL K L I++ S E+I I Sbjct: 41 ILRVEYNPNRPDFSSVYGVAAALRSYLGIETGLRKRSYPLSGISVYVDKSVENIRPHIVC 100 Query: 205 ----KFDLDDSSLCKGFAMCCVKGVRNNVAPNWM--RQRLK-AVGLRSISALVDITNY-- 255 +L ++ L + AM + ++ +W+ R R K A+GL +SA+ Y Sbjct: 101 AVVRNVELSEAELIEFIAM------QEDL--HWIIGRNRRKTAIGLHDLSAISPPFTYKA 152 Query: 256 VSLD--RGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSI 313 V +D R P + A +VL+ ++ G K L D S V++ S G++ S+ Sbjct: 153 VGMDEVRFVPLKDYRAMTPREVLS--KSEIGRKHAWLLK---DASKAPVIVDSRGQVFSM 207 Query: 314 AGIIGGKHAGCDDNTTDVLVEVAL--WDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 I+ D+ ++V W+ +N A L I+ ++ V ++ Sbjct: 208 PPIVNASITELTPGRRDIFIDVTGTDWEKVNQA-----LNILAEAFADAGGVVQRVRVVY 262 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 K G D +P +++ VKRL+G+ + + ++ R+L R+ Sbjct: 263 GRK----------GFYTPDT--------RPLEMMLDMELVKRLTGLQLSLREATRLLRRM 304 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNL--S 489 G + + V P R D+ DLVE+I YG + +T V + N S Sbjct: 305 GMEPRVKGKRLRVLYPRHRADILHPVDLVEDIAIAYGYNN-------MTPVAPQSNTYGS 357 Query: 490 LQQSRTRY--VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE---ILNPISADMSNM 544 L+ T Y V + EV N ++ EQ+ G E+E + NP + + + + Sbjct: 358 LRPQTTFYEKVAETMLGLGFTEVHNL-MLTNEQTHYQMSGLDEIEHVTLANPATREYTMV 416 Query: 545 RTSLLPGLLKATGRNVDRAIAD--FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 RTSL+P LL N D F + ++ H+ E PE M + G Sbjct: 417 RTSLIPSLLATLANNTDNLYPQRIFELGDIIHI-EPAAPEKTVRMKKLAAAIAYAEAG-- 473 Query: 603 RLWSDKSEERCRFVDLFDAKADAL-SVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 +S+ + L K + + + + F+ GR + Sbjct: 474 --YSEAKSVLDELLKLLQLKPEYIPATMGTFIE----------------GRCAALTIDGS 515 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G GE P +L+ FG+ P+ FE+ ++ + Sbjct: 516 KA-GIVGEVSPTVLENFGIEMPVTLFEIEIEKL 547 >gi|165869589|ref|ZP_02214247.1| putative tRNA binding domain protein [Bacillus anthracis str. A0488] gi|217962178|ref|YP_002340748.1| putative tRNA binding domain protein [Bacillus cereus AH187] gi|228917344|ref|ZP_04080897.1| hypothetical protein bthur0012_45550 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228929745|ref|ZP_04092762.1| hypothetical protein bthur0010_44290 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228936002|ref|ZP_04098812.1| hypothetical protein bthur0009_44470 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229124260|ref|ZP_04253451.1| hypothetical protein bcere0016_45450 [Bacillus cereus 95/8201] gi|229141427|ref|ZP_04269964.1| hypothetical protein bcere0013_45200 [Bacillus cereus BDRD-ST26] gi|229181010|ref|ZP_04308345.1| hypothetical protein bcere0005_43540 [Bacillus cereus 172560W] gi|229198856|ref|ZP_04325548.1| hypothetical protein bcere0001_43760 [Bacillus cereus m1293] gi|301056200|ref|YP_003794411.1| tRNA binding-domain-containing protein [Bacillus anthracis CI] gi|164714418|gb|EDR19937.1| putative tRNA binding domain protein [Bacillus anthracis str. A0488] gi|217063892|gb|ACJ78142.1| putative tRNA binding domain protein [Bacillus cereus AH187] gi|228584630|gb|EEK42756.1| hypothetical protein bcere0001_43760 [Bacillus cereus m1293] gi|228602567|gb|EEK60053.1| hypothetical protein bcere0005_43540 [Bacillus cereus 172560W] gi|228641990|gb|EEK98284.1| hypothetical protein bcere0013_45200 [Bacillus cereus BDRD-ST26] gi|228659161|gb|EEL14810.1| hypothetical protein bcere0016_45450 [Bacillus cereus 95/8201] gi|228823770|gb|EEM69592.1| hypothetical protein bthur0009_44470 [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228829924|gb|EEM75544.1| hypothetical protein bthur0010_44290 [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228842271|gb|EEM87366.1| hypothetical protein bthur0012_45550 [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300378369|gb|ADK07273.1| tRNA binding-domain protein [Bacillus cereus biovar anthracis str. CI] Length = 201 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|22536362|ref|NP_687213.1| tRNA-binding domain-containing protein [Streptococcus agalactiae 2603V/R] gi|22533188|gb|AAM99085.1|AE014200_4 tRNA binding domain protein [Streptococcus agalactiae 2603V/R] Length = 208 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I + + + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIE--PTFVVAQIKEIIDHPDSDHLHICQAEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|42783880|ref|NP_981127.1| tRNA-binding domain-containing protein [Bacillus cereus ATCC 10987] gi|196040924|ref|ZP_03108222.1| putative tRNA binding domain protein [Bacillus cereus NVH0597-99] gi|42739810|gb|AAS43735.1| tRNA binding domain protein, putative [Bacillus cereus ATCC 10987] gi|196028378|gb|EDX66987.1| putative tRNA binding domain protein [Bacillus cereus NVH0597-99] Length = 204 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 75 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 129 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 130 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 182 >gi|115465395|ref|NP_001056297.1| Os05g0558900 [Oryza sativa Japonica Group] gi|50878320|gb|AAT85095.1| putative phenylalanyl-tRNA synthetase beta chain (PheRS) [Oryza sativa Japonica Group] gi|113579848|dbj|BAF18211.1| Os05g0558900 [Oryza sativa Japonica Group] gi|215678744|dbj|BAG95181.1| unnamed protein product [Oryza sativa Japonica Group] Length = 596 Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 30/256 (11%) Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + VSVP R D+ DLVE++ YG + + KS+P +T + +Q R+ Sbjct: 353 RISVSVPPTRSDILHARDLVEDVAIAYGYNNVPKSKPKCMT-------IGGRQPLNRFSD 405 Query: 500 RVLASRA---MMEVVNWSFISKEQSV-LFGGGQ---RELEILNPISADMSNMRTSLLPGL 552 ++ A A MEV+ ++ S+E++ + Q + + I NP +++ +RTSL+ L Sbjct: 406 KLRAEVARAGYMEVLTFTLCSREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCL 465 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK-GSSGIEGSGRLWSDKSEE 611 LK N+D IFEV V D G R G+S L+ +K Sbjct: 466 LKTLKHNIDHP-RPIKIFEVGDVVTLD----------GSRDVGASNNRRLAALYCNKQSG 514 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 + L D + + P + + + P R I S +GY G H Sbjct: 515 FEEIMGLVDRIVNVVRA--PHIKFGQNYYVPTNEPEFFPKRQCKIVMSDGKQIGYLGIVH 572 Query: 672 PNILDFFGLSNPICGF 687 +L FG+ +P C F Sbjct: 573 AEVLRKFGIPDP-CTF 587 >gi|118479829|ref|YP_896980.1| tRNA-binding-domain-containing protein [Bacillus thuringiensis str. Al Hakam] gi|196043899|ref|ZP_03111136.1| putative tRNA binding domain protein [Bacillus cereus 03BB108] gi|225866680|ref|YP_002752058.1| putative tRNA binding domain protein [Bacillus cereus 03BB102] gi|118419054|gb|ABK87473.1| tRNA binding-domain protein [Bacillus thuringiensis str. Al Hakam] gi|196025235|gb|EDX63905.1| putative tRNA binding domain protein [Bacillus cereus 03BB108] gi|225787843|gb|ACO28060.1| putative tRNA binding domain protein [Bacillus cereus 03BB102] Length = 204 Score = 61.2 bits (147), Expect = 6e-07, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 75 VEKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 130 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 131 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 182 >gi|195573421|ref|XP_002104692.1| GD18307 [Drosophila simulans] gi|194200619|gb|EDX14195.1| GD18307 [Drosophila simulans] Length = 576 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 68/289 (23%), Positives = 110/289 (38%), Gaps = 46/289 (15%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P E +L R+ + D V +P R DV D+ E++ YG + IK Sbjct: 319 GIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR------ 529 Q+ + L+ T ++ +A E + ++ S++ G++ Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDDI-----GRKLNKNID 430 Query: 530 ---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + I NP + + +RT+LLPGLLK N + +FE+S V D + Sbjct: 431 ALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVVAD-----ES 484 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR---FESG 643 G R + G L D LSV P+ S + ++ Sbjct: 485 TEVGARNERRVVHG-----------------LLDRVMQLLSV--PWKSASGTKGYYLQAT 525 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y PGR + +V+G G HP +L F L+ P E ++ Sbjct: 526 EDPSYFPGRCANVMYDG-VVIGKIGVLHPTVLQAFELTTPCSAVEFTIE 573 >gi|268319923|ref|YP_003293579.1| Phenylalanyl-tRNA synthetase beta subunit [Lactobacillus johnsonii FI9785] gi|262398298|emb|CAX67312.1| Phenylalanyl-tRNA synthetase beta subunit [Lactobacillus johnsonii FI9785] Length = 215 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G + V A PG+ +P N + Sbjct: 100 VKTCEAHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQMVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 +RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ALRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFKAG 196 >gi|225871391|ref|YP_002747338.1| tRNA-binding protein [Streptococcus equi subsp. equi 4047] gi|225700795|emb|CAW95481.1| putative tRNA-binding protein [Streptococcus equi subsp. equi 4047] Length = 208 Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 7/120 (5%) Query: 30 LEVEKVDNREALSP---FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVG 85 L E R SP F + +++ + +PD D I ++ + +Q+V GAPN VG Sbjct: 79 LAQEGFTERLEASPAPVFVVGQIIEMIPHPDSDHLNICQVQIAPDKAVQIVAGAPNAAVG 138 Query: 86 LLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 L + A PG+ +P ++I K+RG ES GMMCS +EL L + I+EL A VG Sbjct: 139 LKTIVALPGAMMPSGSLIFP-GKLRGKESFGMMCSPRELALPNAPQKRGIIELGDAAAVG 197 >gi|225869392|ref|YP_002745340.1| tRNA-binding protein [Streptococcus equi subsp. zooepidemicus] gi|225702668|emb|CAX00760.1| putative tRNA-binding protein [Streptococcus equi subsp. zooepidemicus] Length = 208 Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats. Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 7/120 (5%) Query: 30 LEVEKVDNREALSP---FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVG 85 L E R SP F + +++ + +PD D I ++ + +Q+V GAPN VG Sbjct: 79 LAQEGFTERLEASPAPVFVVGQIIEMIPHPDSDHLNICQVQIAPDKAVQIVAGAPNAAVG 138 Query: 86 LLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 L + A PG+ +P ++I K+RG ES GMMCS +EL L + I+EL A VG Sbjct: 139 LKTIVALPGAMMPSGSLIFP-GKLRGKESFGMMCSPRELALPNAPQKRGIIELGDAAAVG 197 >gi|42519541|ref|NP_965471.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|41583830|gb|AAS09437.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii NCC 533] gi|329667780|gb|AEB93728.1| phenylalanyl-tRNA synthetase beta chain [Lactobacillus johnsonii DPC 6026] Length = 215 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G + V A PG+ +P N + Sbjct: 100 VKTCEAHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQMVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 +RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ALRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFKAG 196 >gi|66552117|ref|XP_623501.1| PREDICTED: probable phenylalanyl-tRNA synthetase beta chain-like [Apis mellifera] Length = 590 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 96/418 (22%), Positives = 159/418 (38%), Gaps = 85/418 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV S+G I S II G H+ NT ++L+E I++ ++ L I + ++ Sbjct: 222 VVEDSNGIILSFPPIINGDHSKITLNTKNILIECT---AIDLTKAKIVLNTIVCAFSQYC 278 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + M+ VL + + K R I + + GI Sbjct: 279 KTKYTIEMVEVL--------------YPNGQVFHYPDLKYRTIEIDCEKAMKYIGIKQTT 324 Query: 422 EDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 E+ + +L R+ I +K + VP R DV D+ E+I YG ++I+ Sbjct: 325 EELVSLLSRMSLKTSIKNDNKLIIEVPPTRHDVLHACDIYEDIAIAYGYNKIQKTIPYLF 384 Query: 474 --SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVLFGGGQ-- 528 +E PL ++ D Q RT LA E + +S S+E S G Sbjct: 385 TIAEECPLNKLSD-------QLRTE-----LAYAGFTEALTFSLCSREDISNKLGHNLIN 432 Query: 529 -RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEG-- 583 + ILNP + + RT+L+PGLLK N + +FEVS + +N+T G Sbjct: 433 VPAVHILNPKTLEFQVARTTLIPGLLKTLAANKKMPLPH-KLFEVSDIILKDNNTEVGAR 491 Query: 584 -QKYMAAGIRKGSSGIEGSGRL-----------WSDKSEERCRFVDLFDAKADALSVIEP 631 +++ A S G E L W++ + ++ D Sbjct: 492 NNRHLCAIYCNKSDGFELIHGLLDRILQILEVPWNNNETKNGYYLRAVD----------- 540 Query: 632 FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P+++ P R I + V+G G HP+++ F L+ P E+ Sbjct: 541 ------------DPTFF-PHRCAEILCYNK-VIGKMGVLHPDVISKFELNTPCSILEI 584 >gi|116491264|ref|YP_810808.1| EMAP domain-containing protein [Oenococcus oeni PSU-1] gi|290890811|ref|ZP_06553878.1| hypothetical protein AWRIB429_1268 [Oenococcus oeni AWRIB429] gi|116091989|gb|ABJ57143.1| EMAP domain [Oenococcus oeni PSU-1] gi|290479583|gb|EFD88240.1| hypothetical protein AWRIB429_1268 [Oenococcus oeni AWRIB429] Length = 203 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 6/137 (4%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 +E++ + L G + E V + EA F I V S ++PD D + ++ + +Q+V Sbjct: 62 IEELNELLIQAGFKPELVYDPEA--KFVIAYVDSFVKHPDSDHLHVAQVKISSDKSVQIV 119 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 G+PN+R G+ V PG+ +P I+ K+RG++S GMM + KEL L + D ++ Sbjct: 120 SGSPNLRRGIKTVACLPGAIMPSGK-IIWPGKLRGVDSYGMMAAPKELGLKNAPDRPGMI 178 Query: 135 ELPIDAPVGGRLSDYLE 151 LP D G D+++ Sbjct: 179 VLPDDFGKVGETFDFIK 195 >gi|327490837|gb|EGF22618.1| tRNA binding domain protein [Streptococcus sanguinis SK1058] Length = 208 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKEGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|315038913|ref|YP_004032481.1| phenylalanyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325957334|ref|YP_004292746.1| phenylalanyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|312277046|gb|ADQ59686.1| phenylalanyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112] gi|325333899|gb|ADZ07807.1| phenylalanyl-tRNA synthetase [Lactobacillus acidophilus 30SC] gi|327184057|gb|AEA32504.1| phenylalanyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118] Length = 215 Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 11/138 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKH 70 +D LE + L G D++ A T+V V + E++PD D + ++ G Sbjct: 68 SDDELEALNKKLAEAGF-----DDKLAYGKPTLVYGYVKTCEKHPDSDHLHVTTVEVGNG 122 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SD 128 +E Q+VCGAPN+ G V A PG+ +P N + ++RG++S GM+CS +EL L + Sbjct: 123 EEHQIVCGAPNIAQGQKVVVALPGTLMP-NGQQIWPGELRGVDSYGMICSARELGLPHAP 181 Query: 129 DSASIMELPIDAPVGGRL 146 IM +P + VG Sbjct: 182 QKRGIMVVPDNFEVGAEF 199 >gi|228987947|ref|ZP_04148053.1| hypothetical protein bthur0001_46130 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771751|gb|EEM20211.1| hypothetical protein bthur0001_46130 [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 201 Score = 61.2 bits (147), Expect = 7e-07, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 72 VEKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|58384361|ref|XP_313256.2| AGAP003517-PA [Anopheles gambiae str. PEST] gi|55240977|gb|EAA08937.2| AGAP003517-PA [Anopheles gambiae str. PEST] Length = 590 Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 98/455 (21%), Positives = 173/455 (38%), Gaps = 73/455 (16%) Query: 258 LDRGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVI 304 LD+ FDA D+ L +A +GE+++ + L SP VI Sbjct: 168 LDKLQGPFTFDAKPPKDIRFVPLNQEKAMTGEELMEFYSTHAQLKTYLPIIRDSPVYPVI 227 Query: 305 A-SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERG 363 ++G + S+ II G H+ T +V +E D +T +R Sbjct: 228 YDANGVVLSLPPIINGDHSKITLQTKNVFIECTATD-------------LTKARI----- 269 Query: 364 VDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMN-----SEVKRL 414 VL +V + + C + ++ A T + + F +E Sbjct: 270 --------VLDTLVCMFSTHCAKQFTVEYCEVVSASGETKQYPDLAFRKETISVAETNAY 321 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 G++ E +L RL + D EV VP R D+ D+ E++ YG ++I Sbjct: 322 IGLNESAEKMAYLLNRLLPTKQTAPDTLEVEVPPTRHDILHACDIYEDVAIGYGYNRI-P 380 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE---- 530 + LP ++ + L + T ++ +A E + ++ S++ Q + Sbjct: 381 KTLP-AKMHIAKQYPLNK-LTEQLREQIAQAGFTEGLTFTLCSRDDIATKMNAQIDQIPA 438 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + I NP + + +RT+L+PGLLK N + +FEVS V D+ Sbjct: 439 VHIANPKTLEFQVVRTTLIPGLLKTLAANRKMPLP-LKLFEVSDVVLADS---------- 487 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLRFESGAPSWYH 649 K G + R+ + + F + + ++E P+ ++ Y Sbjct: 488 --KSEVGAKNERRVCAINCNKTAGFEVVHGLLDRVMQLLEVPWDRQTGYYLQACDDPAYF 545 Query: 650 PGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 PGR + ++ A I G G HP +L F L+ P Sbjct: 546 PGRCASVLYKGAAI--GRIGVLHPTVLQAFELTTP 578 >gi|157151519|ref|YP_001451167.1| tRNA-binding domain-containing protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076313|gb|ABV10996.1| tRNA binding domain [Streptococcus gordonii str. Challis substr. CH1] Length = 208 Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 3/90 (3%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L P F + +++ + +PD D I ++ + +Q+V GAPN R+GL + A PG+ +P Sbjct: 92 LQPKFVVGEIVEMTAHPDSDHLNICQVQVAADETLQIVAGAPNARLGLKTIVALPGAMMP 151 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + N+I ++RG +S GMMCS +EL L + Sbjct: 152 KGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|332358399|gb|EGJ36224.1| tRNA binding domain protein [Streptococcus sanguinis SK49] Length = 208 Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKEGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|222632530|gb|EEE64662.1| hypothetical protein OsJ_19516 [Oryza sativa Japonica Group] Length = 506 Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 67/256 (26%), Positives = 108/256 (42%), Gaps = 30/256 (11%) Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + VSVP R D+ DLVE++ YG + + KS+P +T + +Q R+ Sbjct: 263 RISVSVPPTRSDILHARDLVEDVAIAYGYNNVPKSKPKCMT-------IGGRQPLNRFSD 315 Query: 500 RVLASRA---MMEVVNWSFISKEQSV-LFGGGQ---RELEILNPISADMSNMRTSLLPGL 552 ++ A A MEV+ ++ S+E++ + Q + + I NP +++ +RTSL+ L Sbjct: 316 KLRAEVARAGYMEVLTFTLCSREENFDMLNRTQDVNKAVIIANPRTSEFEVVRTSLMSCL 375 Query: 553 LKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK-GSSGIEGSGRLWSDKSEE 611 LK N+D IFEV V D G R G+S L+ +K Sbjct: 376 LKTLKHNIDHP-RPIKIFEVGDVVTLD----------GSRDVGASNNRRLAALYCNKQSG 424 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFH 671 + L D + + P + + + P R I S +GY G H Sbjct: 425 FEEIMGLVDRIVNVVRA--PHIKFGQNYYVPTNEPEFFPKRQCKIVMSDGKQIGYLGIVH 482 Query: 672 PNILDFFGLSNPICGF 687 +L FG+ +P C F Sbjct: 483 AEVLRKFGIPDP-CTF 497 >gi|30264763|ref|NP_847140.1| tRNA-binding domain-containing protein [Bacillus anthracis str. Ames] gi|47530239|ref|YP_021588.1| tRNA-binding domain-containing protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49187580|ref|YP_030833.1| tRNA-binding domain-containing protein [Bacillus anthracis str. Sterne] gi|49481450|ref|YP_038738.1| tRNA-binding-domain-containing protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52140811|ref|YP_086019.1| tRNA-binding-domain-containing protein [Bacillus cereus E33L] gi|65322060|ref|ZP_00395019.1| COG0073: EMAP domain [Bacillus anthracis str. A2012] gi|167633975|ref|ZP_02392298.1| putative tRNA binding domain protein [Bacillus anthracis str. A0442] gi|167638103|ref|ZP_02396381.1| putative tRNA binding domain protein [Bacillus anthracis str. A0193] gi|170685951|ref|ZP_02877174.1| putative tRNA binding domain protein [Bacillus anthracis str. A0465] gi|170705448|ref|ZP_02895912.1| putative tRNA binding domain protein [Bacillus anthracis str. A0389] gi|177651304|ref|ZP_02934135.1| putative tRNA binding domain protein [Bacillus anthracis str. A0174] gi|190568291|ref|ZP_03021199.1| putative tRNA binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|206978137|ref|ZP_03239020.1| putative tRNA binding domain protein [Bacillus cereus H3081.97] gi|222098163|ref|YP_002532220.1| tRNA binding-domain protein [Bacillus cereus Q1] gi|227817481|ref|YP_002817490.1| putative tRNA binding domain protein [Bacillus anthracis str. CDC 684] gi|229600480|ref|YP_002868970.1| putative tRNA binding domain protein [Bacillus anthracis str. A0248] gi|254687501|ref|ZP_05151357.1| putative tRNA binding domain protein [Bacillus anthracis str. CNEVA-9066] gi|254725065|ref|ZP_05186848.1| putative tRNA binding domain protein [Bacillus anthracis str. A1055] gi|254736802|ref|ZP_05194508.1| putative tRNA binding domain protein [Bacillus anthracis str. Western North America USA6153] gi|254741839|ref|ZP_05199526.1| putative tRNA binding domain protein [Bacillus anthracis str. Kruger B] gi|254754563|ref|ZP_05206598.1| putative tRNA binding domain protein [Bacillus anthracis str. Vollum] gi|254757395|ref|ZP_05209422.1| putative tRNA binding domain protein [Bacillus anthracis str. Australia 94] gi|30259438|gb|AAP28626.1| putative tRNA binding domain protein [Bacillus anthracis str. Ames] gi|47505387|gb|AAT34063.1| putative tRNA binding domain protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49181507|gb|AAT56883.1| tRNA binding domain protein, putative [Bacillus anthracis str. Sterne] gi|49333006|gb|AAT63652.1| tRNA binding-domain protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51974280|gb|AAU15830.1| tRNA binding-domain protein [Bacillus cereus E33L] gi|167513920|gb|EDR89288.1| putative tRNA binding domain protein [Bacillus anthracis str. A0193] gi|167530776|gb|EDR93478.1| putative tRNA binding domain protein [Bacillus anthracis str. A0442] gi|170129573|gb|EDS98436.1| putative tRNA binding domain protein [Bacillus anthracis str. A0389] gi|170670415|gb|EDT21155.1| putative tRNA binding domain protein [Bacillus anthracis str. A0465] gi|172083130|gb|EDT68192.1| putative tRNA binding domain protein [Bacillus anthracis str. A0174] gi|190560547|gb|EDV14524.1| putative tRNA binding domain protein [Bacillus anthracis Tsiankovskii-I] gi|206743673|gb|EDZ55097.1| putative tRNA binding domain protein [Bacillus cereus H3081.97] gi|221242221|gb|ACM14931.1| tRNA binding-domain protein [Bacillus cereus Q1] gi|227005850|gb|ACP15593.1| putative tRNA binding domain protein [Bacillus anthracis str. CDC 684] gi|229264888|gb|ACQ46525.1| putative tRNA binding domain protein [Bacillus anthracis str. A0248] gi|324328586|gb|ADY23846.1| putative tRNA binding domain protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 204 Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 75 VEKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 130 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 131 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 182 >gi|325067186|ref|ZP_08125859.1| phenylalanyl-tRNA synthetase subunit beta [Actinomyces oris K20] Length = 133 Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 4/135 (2%) Query: 672 PNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK-KVVHLSSLHPVKRDLAFIVDQHIPA 730 P ++ GL C E+ LD P+ + R+ +V +S+ K D+A +VD+ A Sbjct: 1 PRVVRALGLPERACAVEIDLD--PLLEAARSAGALQVKAVSTFPAAKEDIALVVDETTTA 58 Query: 731 GTLVNIIKNV-DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 + +++ L ++V +FDVF+G LGEGKKS+A ++++ T ++ + R Sbjct: 59 AEVEALVRQAAGDLAEEVRLFDVFRGPQLGEGKKSLAFSLVLRAPDRTLTAEETAGVRKR 118 Query: 790 IVENVVKKTNAVLRS 804 +V+ K A LRS Sbjct: 119 VVKRAAKLLGAELRS 133 >gi|47565117|ref|ZP_00236160.1| tRNA binding domain protein [Bacillus cereus G9241] gi|47557903|gb|EAL16228.1| tRNA binding domain protein [Bacillus cereus G9241] Length = 204 Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 75 VEKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 130 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 131 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 182 >gi|169829640|ref|YP_001699798.1| phenylalanyl-tRNA synthetase subunit beta [Lysinibacillus sphaericus C3-41] gi|168994128|gb|ACA41668.1| Phenylalanyl-tRNA synthetase beta chain [Lysinibacillus sphaericus C3-41] Length = 204 Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F I V + E++P+ D +I ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 FSPKFVIGFVETKEKHPNADKLSICSVNVG-DETLQIVCGAPNVEAGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ +RG++S GM+CS +EL + + I+ LP DA VG Sbjct: 151 -SGMLIKEGNLRGVDSFGMLCSARELAIPNAPSEKGILVLPEDAIVG 196 >gi|146419612|ref|XP_001485767.1| hypothetical protein PGUG_01438 [Meyerozyma guilliermondii ATCC 6260] gi|146389182|gb|EDK37340.1| hypothetical protein PGUG_01438 [Meyerozyma guilliermondii ATCC 6260] Length = 588 Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 119/517 (23%), Positives = 212/517 (41%), Gaps = 105/517 (20%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLS--SESIPLEIKFDLDDSS 212 P + + + NR D + + GIA L LG N P S + P + F ++ S+ Sbjct: 49 PQLKIEVPANRYDMLCIEGIAQAL-NEFLG-----NCEAPQYKLSPAKP-QTTFTIEKST 101 Query: 213 L-CKGFAMCCV-KGVR-------------NNVAPNWMRQR-LKAVGLRSISALVDITNYV 256 + +A C + +GV+ + + N R R L A+G + L Y Sbjct: 102 TQIRPYAACAILRGVKFDKRRYDSFIALQDKLHTNLCRNRTLVAMGTHDLDTLTPPFVYK 161 Query: 257 SLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL---------SPDNVVIA-S 306 +L PS + A L + +GE+++A ++ +L SP +I S Sbjct: 162 ALP---PSEIKFAP-----LNQTKEMTGEEMMAFYEKDKNLGKYLHIIKDSPVYPIIYDS 213 Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 G++ S+ II H+ T +V+++V D L + SRY E Sbjct: 214 KGQVCSMPPIINSNHSKISLETKNVMLDVTGTDKTKTEIVINQL-VAMFSRYCTE----- 267 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLR 426 P V +I S +C +I ++NS + G+D E+ + Sbjct: 268 ----PFTVEPVEIISE--HNNESRVCPNIEPKTAEAEIDYINSCL----GLDYNGEEIAK 317 Query: 427 ILERLGFSVIGEYDKF-EVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SE 475 +L+++ S + DK EV +P R D+ + D++E+ YG + +K + Sbjct: 318 LLKKMSLSARPKSDKLLEVEIPITRPDILHQCDIMEDAAIGYGFNNLKKTKPKSDSVVAS 377 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----GGGQRE 530 PLP+ ++ D + R+ +S+A +EV+ + S +++ F G Sbjct: 378 PLPVNKIAD-------------ILRIASSQAGYLEVMPLTLCSHDENFRFLRTKDDGTTA 424 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPEGQKY--- 586 + + NP + + +RT+LLPG+LK N A+ +FE + V++N E Y Sbjct: 425 VVLENPKTIEYQVVRTTLLPGILKTIKENRKHALP-LKVFEAADVVFKNPMLERGAYNQR 483 Query: 587 ----MAAGIRKGSSGIEG-SGRL-------WSDKSEE 611 + AG G ++G G++ W +K EE Sbjct: 484 NWCAIYAGKTSGFEYVQGLLGKIMQTMRTPWLEKPEE 520 >gi|327311883|ref|YP_004338780.1| phenylalanyl-tRNA synthetase subunit beta [Thermoproteus uzoniensis 768-20] gi|326948362|gb|AEA13468.1| phenylalanyl-tRNA synthetase subunit beta [Thermoproteus uzoniensis 768-20] Length = 520 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 94/398 (23%), Positives = 160/398 (40%), Gaps = 80/398 (20%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ S+G+I + ++G + +T DVL++V Sbjct: 193 LVDSEGKIMVVVPVLGSECCKVTPSTRDVLIDVT-------------------------- 226 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDIC--IARNITY----KPRKIVFMNSEVKRLSG 416 G L+ P+LK + L+ SL + S + N Y + R+I +V + G Sbjct: 227 GPQLE---PLLKILSILVYSLLERSKSRRVELVKINGVYPTRLESREIYVDRKQVGEMLG 283 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 ID+ E+ +L R + G+ V V +R ++ D+ E+I + G I P Sbjct: 284 IDLSDEEYRSLLRRARHDLRGD----SVLVAPYRINLISWVDIAEDIAIMKGYGNISRVP 339 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 P+ + + R R L S EV+N + ++L G + ++NP Sbjct: 340 PPIITAGRRHRSEISSEDAR---RALLSLGFQEVMNG--VLTHSALLDAFGLKYARVVNP 394 Query: 537 ISADMSNMRTSLLPGLLK-ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGI--RK 593 +S + +R+SLLPGLL +G R +FE+ V +A G+ R Sbjct: 395 VSERLDAVRSSLLPGLLSVVSGLKRPRV----KLFEIGDV-----------VAEGLTRRA 439 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 ++ I G G +D + +F + AL V + R E+G W GR Sbjct: 440 VAAAIGGDGVTITDG-------IAVFRSLCIALGV--------NCRVENGHMYWCAEGRC 484 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 +K + GY GE P+IL G+ P+ E++L Sbjct: 485 AELKGEVD---GYVGEVRPDILTKLGVFVPVVLGEIFL 519 >gi|293572299|ref|ZP_06683296.1| emap domain protein [Enterococcus faecium E980] gi|291607640|gb|EFF36965.1| emap domain protein [Enterococcus faecium E980] Length = 201 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + +RE P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADRE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + + Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPE 182 Query: 130 SASIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|228910549|ref|ZP_04074363.1| hypothetical protein bthur0013_46950 [Bacillus thuringiensis IBL 200] gi|228849113|gb|EEM93953.1| hypothetical protein bthur0013_46950 [Bacillus thuringiensis IBL 200] Length = 201 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP F + V E++P+ D I +++ G +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGTGT-LQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|94987733|ref|YP_595834.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS9429] gi|94991601|ref|YP_599700.1| tRNA-binding domain-containing protein [Streptococcus pyogenes MGAS2096] gi|94541241|gb|ABF31290.1| tRNA binding domain protein [Streptococcus pyogenes MGAS9429] gi|94545109|gb|ABF35156.1| tRNA binding domain protein [Streptococcus pyogenes MGAS2096] Length = 208 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 9/129 (6%) Query: 23 DTLTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 + L + E+ K E L P F + +++ + + D D I ++ G+ Q +Q+V Sbjct: 70 EDLARLNAELAKEGFSERLEPTVGPVFVVGQIVEMVAHLDSDHLNICQVAIGEDQTVQIV 129 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIM 134 GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + I+ Sbjct: 130 AGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAPQKRGII 188 Query: 135 ELPIDAPVG 143 EL A VG Sbjct: 189 ELDESAVVG 197 >gi|114583587|ref|XP_001165844.1| PREDICTED: phenylalanine-tRNA synthetase-like, beta subunit isoform 4 [Pan troglodytes] Length = 615 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 64/294 (21%), Positives = 118/294 (40%), Gaps = 45/294 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT ++ +E Sbjct: 222 VIYDSNGVVLSMPPIINGDHSKITVNTRNIFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D VL IV++ C A+++ ++ ++ + V+ Sbjct: 257 -GTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSHTFPELAYRKEMVRADLIN 315 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI E+ ++L R+ VIG+ ++ E+ +P R D+ D+VE+ YG + Sbjct: 316 KKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADIIHACDIVEDAAIAYGYN 375 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG---- 526 I+ + L + N T ++ +A+ E + ++ S+E G Sbjct: 376 NIQ---MTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDIS 432 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT 580 + + I NP +A+ RT+LLPGLLK N + +FE+S + D+ Sbjct: 433 ATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDIVIKDS 485 >gi|262283722|ref|ZP_06061486.1| tRNA-binding domain-containing protein [Streptococcus sp. 2_1_36FAA] gi|262260568|gb|EEY79270.1| tRNA-binding domain-containing protein [Streptococcus sp. 2_1_36FAA] Length = 208 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 3/90 (3%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L P F + +++ + +PD D I ++ + +Q+V GAPN RVGL + A PG+ +P Sbjct: 92 LQPKFVVGEIVEMIAHPDSDHLNICQVQVAADKTLQIVAGAPNARVGLKTIVALPGAMMP 151 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + N+I ++RG +S GMMCS +EL L + Sbjct: 152 KGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|148990119|ref|ZP_01821359.1| hypothetical protein CGSSp6BS73_01843 [Streptococcus pneumoniae SP6-BS73] gi|147924513|gb|EDK75601.1| hypothetical protein CGSSp6BS73_01843 [Streptococcus pneumoniae SP6-BS73] Length = 208 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 25 LTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVR 83 L + G E V+++E F + +++ + +PD D I ++ + +Q+V G PN R Sbjct: 79 LQAEGFTEEIVNDKE--PKFVVGEIVEMVAHPDSDHLNICQVAVASDKIVQIVAGTPNAR 136 Query: 84 VGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAP 141 VGL + A PG+ +P+ N I ++RG +S GMMCS +EL L + ++EL D Sbjct: 137 VGLKTIVALPGAMMPKGNFIFP-GELRGEKSFGMMCSPRELHLPNAPQKRGVLELSEDQV 195 Query: 142 VG 143 VG Sbjct: 196 VG 197 >gi|326533570|dbj|BAK05316.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 594 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 67/265 (25%), Positives = 112/265 (42%), Gaps = 39/265 (14%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 V VP R DV DL E++ YG + + KS+P +T + +Q R+ ++ Sbjct: 354 VYVPPTRSDVLHARDLAEDVAIAYGYNNVPKSKPKSMT-------IGGRQPLNRFSDKIR 406 Query: 503 ASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKA 555 A A MEV+ + S E++ G + + I NP +++ +R+SL+ LLK Sbjct: 407 AEVARAGYMEVLTFVLTSHEENFDMLNRTDDGNKAVIIANPRTSEFEVVRSSLMSCLLKT 466 Query: 556 TGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSE 610 N+D IFEV V DT + +AA +SG E L Sbjct: 467 LKHNIDHP-RPIKIFEVGDVVSLDTSRDVGASNNRRLAALYCNSNSGFEEIMGLVD---- 521 Query: 611 ERCRFVDLFDAKADALSVIEPFVSLDSLRF-ESGAPSWYHPGRSGIIKTSAEIVLGYFGE 669 R V + A P ++ + S P ++ + I+ + + V GYFG Sbjct: 522 ---RIVKIVSA---------PHINFGQTYYVPSSEPEFFTKRQCKIVMSDGKQV-GYFGI 568 Query: 670 FHPNILDFFGLSNPICGFEVYLDSI 694 H +L FG+ +P E+ ++++ Sbjct: 569 VHAEVLRKFGIPDPCTFVEIDIEAL 593 >gi|332796271|ref|YP_004457771.1| phenylalanyl-tRNA synthetase subunit beta [Acidianus hospitalis W1] gi|332694006|gb|AEE93473.1| phenylalanyl-tRNA synthetase, beta subunit [Acidianus hospitalis W1] Length = 539 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 89/422 (21%), Positives = 157/422 (37%), Gaps = 108/422 (25%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA--LWDPI---------NIARSGKNLG 351 ++ DG++ SI II D +T ++ ++V +D + N A G +G Sbjct: 194 ILQEDGQVLSIPPIINSNKTKIDSSTKNLFIDVTGTNFDAVAQTLDLLVSNFAEGGSKIG 253 Query: 352 IITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV 411 + SRY P+L H K+V S++ Sbjct: 254 TVKVSRY--------TSSSPLLIH--------------------------NKLVVKTSDI 279 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G+ + E+ + + + D+ EV VP +R D+ D+ E++ YG Sbjct: 280 NKRLGLSLSTEEIAKYVRMMRMDANINSDEIEVIVPQYRIDIMTYVDIAEDVAMAYGYKS 339 Query: 472 IK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 E LP+T++E R + + E+ ++F+ + S Sbjct: 340 FSLPQYTSKGMGELLPITKLE------------RAFRGLAIGGGFQEI--FTFVLNKSSY 385 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV------- 575 L ++I NPI+ + +R SL+ +LK +N A +FEV V Sbjct: 386 LLYNDF--VKIQNPITVEYDAVRNSLIWNMLKFLAKN-QHARFPIKVFEVGDVVVKSEES 442 Query: 576 ---YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF 632 Y+NDT M + R+ ++ + + L++ K EP Sbjct: 443 DTGYKNDTRACLAIM-------------NSRVSYEELQSVVHQI-LYNLKGK-----EP- 482 Query: 633 VSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 R+ ++ GRS I +V G GE P IL+ F + NP+ E+YL+ Sbjct: 483 ------RYVRQEKDYFIKGRSAKILFDNNVV-GEIGEISPEILEKFNIENPVVIAEIYLE 535 Query: 693 SI 694 + Sbjct: 536 KL 537 >gi|71754811|ref|XP_828320.1| phenylalanyl-tRNA synthetase [Trypanosoma brucei TREU927] gi|70833706|gb|EAN79208.1| phenylalanyl-tRNA synthetase, putative [Trypanosoma brucei] Length = 624 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 77/309 (24%), Positives = 125/309 (40%), Gaps = 27/309 (8%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSL-RILERLGFSVIG-EYDKFEVSVPSWRQDVEEKAD 458 PR + S+V++L GI + + + +LER+ V E V VP R DV D Sbjct: 317 PRLVSVEQSKVEKLIGIKLNSANHMGELLERMLHHVAKVEDSTVTVEVPPTRPDVLGPTD 376 Query: 459 LVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFI 516 L+E++ YG D I E L V + S+ ++ R+ +A+ ME++ +S Sbjct: 377 LMEDVAVAYGYDNITHKECLTFGDVAQQ-----PLSKLSHLIRIEMANAGYMELLTFSLC 431 Query: 517 SKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI------- 564 S+E+ F R + I NP + + R SL+PG+LK N + Sbjct: 432 SREEG--FTRLNRVDDDVAVHIANPKTMEFQICRPSLMPGILKTLNANKSHPLPLRFFEC 489 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 AD + + + +Y G R S E+ V+ AK Sbjct: 490 ADIVLLDNEKNFPPVITPKLEYPNCGARNQRHLAALHCCSESSSFEDIHGLVEFVMAKLG 549 Query: 625 AL-SVIEPFVSLDSLRFESGAPSWYHPGRS---GIIKTSAEIVLGYFGEFHPNILDFFGL 680 + V E V DS E + + PGR + ++ ++ +G FG HPN L + + Sbjct: 550 VVRKVGEEVVDGDSYTLERSSDGAFFPGRCMDVFLHRSGQKVCIGGFGVVHPNTLKAYDI 609 Query: 681 SNPICGFEV 689 P E+ Sbjct: 610 PFPCSYMEL 618 >gi|76787347|ref|YP_328912.1| tRNA-binding domain-containing protein [Streptococcus agalactiae A909] gi|76798819|ref|ZP_00781031.1| tRNA binding domain protein [Streptococcus agalactiae 18RS21] gi|76799271|ref|ZP_00781441.1| tRNA binding domain protein [Streptococcus agalactiae 18RS21] gi|77406770|ref|ZP_00783805.1| tRNA binding domain protein [Streptococcus agalactiae H36B] gi|77410954|ref|ZP_00787310.1| tRNA binding domain protein [Streptococcus agalactiae CJB111] gi|76562404|gb|ABA44988.1| tRNA binding domain protein [Streptococcus agalactiae A909] gi|76585383|gb|EAO61971.1| tRNA binding domain protein [Streptococcus agalactiae 18RS21] gi|76585826|gb|EAO62372.1| tRNA binding domain protein [Streptococcus agalactiae 18RS21] gi|77163009|gb|EAO73964.1| tRNA binding domain protein [Streptococcus agalactiae CJB111] gi|77174613|gb|EAO77447.1| tRNA binding domain protein [Streptococcus agalactiae H36B] Length = 208 Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 18/130 (13%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLL 87 G E V+N E F + ++ + +PD D I + + + +Q+VCGAPN VGL Sbjct: 83 GFEDSLVNNIE--PTFVVAQIKEMIDHPDSDHLHICQAEINDGKTVQIVCGAPNASVGLK 140 Query: 88 GVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 V A PG+ +P ++I K+RG +S GM+CS +EL L P ++ Sbjct: 141 TVAALPGAMMPNGSLIFP-GKLRGEDSFGMLCSARELAL--------------PNAPQVR 185 Query: 148 DYLELSDPII 157 +ELSD +I Sbjct: 186 GIIELSDQVI 195 >gi|227889506|ref|ZP_04007311.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus johnsonii ATCC 33200] gi|227849984|gb|EEJ60070.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus johnsonii ATCC 33200] Length = 215 Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G + V A PG+ +P N + Sbjct: 100 VKTCEAHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQMVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 +RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ALRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFNAG 196 >gi|229175409|ref|ZP_04302923.1| hypothetical protein bcere0006_44890 [Bacillus cereus MM3] gi|228608055|gb|EEK65363.1| hypothetical protein bcere0006_44890 [Bacillus cereus MM3] Length = 201 Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEKINGILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|21355211|ref|NP_651237.1| CG5706 [Drosophila melanogaster] gi|12230002|sp|Q9VCA5|SYFB_DROME RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|7301135|gb|AAF56268.1| CG5706 [Drosophila melanogaster] gi|15292483|gb|AAK93510.1| SD03863p [Drosophila melanogaster] Length = 589 Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 111/292 (38%), Gaps = 39/292 (13%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P E +L R+ + D V +P R DV D+ E++ YG + IK Sbjct: 319 GIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR------ 529 Q+ + L+ T ++ +A E + ++ S++ G++ Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDDI-----GRKLNKNID 430 Query: 530 ---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + I NP + + +RT+LLPGLLK N + +FE+S V D Sbjct: 431 ALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVVAD------- 482 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLR---F 640 G R+ + + F L D LSV P+ S + Sbjct: 483 -----ESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSV--PWKSASGTKGYYL 535 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ Y PGR + +V+G G HP +L F L+ P E ++ Sbjct: 536 QATEDPSYFPGRCANVMYDG-VVIGKIGVLHPTVLQAFELTTPCSAVEFTIE 586 >gi|195331574|ref|XP_002032476.1| GM23499 [Drosophila sechellia] gi|194121419|gb|EDW43462.1| GM23499 [Drosophila sechellia] Length = 589 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 111/292 (38%), Gaps = 39/292 (13%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P E +L R+ + D V +P R DV D+ E++ YG + IK Sbjct: 319 GIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR------ 529 Q+ + L+ T ++ +A E + ++ S++ G++ Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDDI-----GRKLNKNID 430 Query: 530 ---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + I NP + + +RT+LLPGLLK N + +FE+S V D Sbjct: 431 ALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVVAD------- 482 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLR---F 640 G R+ + + F L D LSV P+ S + Sbjct: 483 -----ESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSV--PWKSASGTKGYYL 535 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ Y PGR + +V+G G HP +L F L+ P E ++ Sbjct: 536 QATEDPSYFPGRCANVMYDG-VVIGKIGVLHPTVLQAFELTTPCSAVEFTIE 586 >gi|325693882|gb|EGD35801.1| tRNA binding domain protein [Streptococcus sanguinis SK150] Length = 208 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAVLNQELSKEGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQIAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|296411182|ref|XP_002835313.1| hypothetical protein [Tuber melanosporum Mel28] gi|295629090|emb|CAZ79470.1| unnamed protein product [Tuber melanosporum] Length = 592 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 66/315 (20%), Positives = 130/315 (41%), Gaps = 44/315 (13%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKA 457 PR S + G+ + + +L+++ ++ + + ++ VP R DV + Sbjct: 296 PRSTTAEVSYINSCCGLQLSPSEICTMLDKMAYTAKPSSSDPNLLDIDVPVTRADVLHQC 355 Query: 458 DLVEEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQ-SRTRYVKRVLASRA 506 D++E++ YG + + + PLP+ ++ D L + + +L S Sbjct: 356 DIMEDVAIGYGFNNLPKTFPGKSGTIAAPLPINKLSDIVRLEAAMCGWSEVLPLILCSHD 415 Query: 507 MMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 N+++++++ G + + NP +A+ +RTSLLPG+LK N ++ Sbjct: 416 E----NFAWLNRKDD-----GHTAVRLANPKTAEYQIVRTSLLPGVLKTIRENRKHSLP- 465 Query: 567 FAIFEVSHVYEND-----TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 +FEVS V D +++ A + +SG E L R + + Sbjct: 466 IKVFEVSDVAFKDEKLERKSRNERHFCAAVCGKTSGFEAVHGLLD-------RVMAMLGT 518 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII----KTSAEIVLGYFGEFHPNILDF 677 K +E + E+ + PGR+ I K +G FG HP++L+ Sbjct: 519 KVLDTGEME----QEGYWIEAADEPTHFPGRAASILVRHKNGKRQSIGTFGILHPSVLEK 574 Query: 678 FGLSNPICGFEVYLD 692 F + P+ E+ L+ Sbjct: 575 FEIPYPVSTLELNLE 589 >gi|94268980|ref|ZP_01291343.1| Ferredoxin-fold anticodon-binding [delta proteobacterium MLMS-1] gi|93451394|gb|EAT02250.1| Ferredoxin-fold anticodon-binding [delta proteobacterium MLMS-1] Length = 136 Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 78/143 (54%), Gaps = 12/143 (8%) Query: 668 GEFHPNILDFFGLSNPICGFEVYLDSI---PISQKKRTKTKKVVHLSSLHP-VKRDLAFI 723 G+F P +L FG+ + ++ ++S+ P++++ H +P VK DLA + Sbjct: 1 GKFQPAVLKAFGIKQQVFYLDLDMESLMALPVAER-------AFHSLPRYPAVKWDLAML 53 Query: 724 VDQHIPAG-TLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDD 782 V + PAG L +I+ +L++ +FDV++G+++ GKKSVA + + + T ++ Sbjct: 54 VAEETPAGEMLAAVIEAGGKLLERAEIFDVYRGRNIEPGKKSVAFAIHYRDAERTLNEEK 113 Query: 783 IRILMDRIVENVVKKTNAVLRSS 805 + ++ +I++ + + + LR + Sbjct: 114 VAVVHQKIIDLLESRFHGQLREA 136 >gi|296505160|ref|YP_003666860.1| tRNA-binding domain-containing protein [Bacillus thuringiensis BMB171] gi|296326212|gb|ADH09140.1| tRNA-binding domain-containing protein [Bacillus thuringiensis BMB171] Length = 204 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 75 VEKINGILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 129 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 130 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 182 >gi|327473057|gb|EGF18484.1| tRNA binding domain protein [Streptococcus sanguinis SK408] Length = 208 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + +++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKEGFPADLINDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|303272127|ref|XP_003055425.1| translation initiation factor [Micromonas pusilla CCMP1545] gi|226463399|gb|EEH60677.1| translation initiation factor [Micromonas pusilla CCMP1545] Length = 1626 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%) Query: 46 IVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIV 104 I +V +P D I ++D G + ++VVCGAPNVR GL ++A G +P + Sbjct: 327 IAEVTECAPHPMADKLTICQVDVGDGEPLRVVCGAPNVRAGLKVIFARVGVVVPSTGAKL 386 Query: 105 NVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVG 143 +RG+ S GM+ S E+ + I+E P APVG Sbjct: 387 AKTPLRGVMSEGMILSAAEMGWMPKAVGIIECPKKAPVG 425 >gi|148226986|ref|NP_001080579.1| phenylalanyl-tRNA synthetase, beta subunit [Xenopus laevis] gi|33416729|gb|AAH56121.1| Frsb protein [Xenopus laevis] Length = 588 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 89/403 (22%), Positives = 158/403 (39%), Gaps = 62/403 (15%) Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 +G + S+ II G H+ NT +V +E D + A+ ++ + S Y E Sbjct: 228 NGVLLSMPPIINGDHSRITLNTRNVFIECTATD-LTKAKIVLDMMVTMFSEYCAE----- 281 Query: 367 QGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVF--MNSEVKRLSGIDVPIEDS 424 P +I G++ CI + Y+ + MNS++ GI + Sbjct: 282 ----PFTVEAAEVIRP--DGSS---CIYPELAYRKETVPAEKMNSKI----GISETPANL 328 Query: 425 LRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--------- 473 ++L R+ V+ + ++ E+ VP R D+ D+VE+ YG + IK Sbjct: 329 AKLLTRMCLKSHVLEDGEQIEIEVPPTRADIIHACDIVEDAAVAYGFNNIKMVIPKTYTI 388 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVLFG---GGQR 529 + LPL ++ T +++ LA+ E + ++ S + S G + Sbjct: 389 ANQLPLNKL------------TELLRQDLAAAGFTEALTFALCSVDDISDKLGIPVSATK 436 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 I NP + + RT+LLPGLLK N + +FE+S V D + Sbjct: 437 AAHISNPKTTEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDPSKDV----- 490 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYH 649 G+ ++ +K+ L D L+V + ++ + Sbjct: 491 ----GARNFRHLCAVYYNKNPGFEVIHGLLDRTMQLLAVCP---GENGYTIKAAQDPAFF 543 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 PGR I + + + G G HP+I+ F L+ P E+ L+ Sbjct: 544 PGRCAEILVNGQSI-GKLGVLHPDIITKFDLNLPCSALEINLE 585 >gi|229076202|ref|ZP_04209169.1| hypothetical protein bcere0024_44000 [Bacillus cereus Rock4-18] gi|229099172|ref|ZP_04230105.1| hypothetical protein bcere0020_43940 [Bacillus cereus Rock3-29] gi|229105322|ref|ZP_04235970.1| hypothetical protein bcere0019_44560 [Bacillus cereus Rock3-28] gi|229118184|ref|ZP_04247542.1| hypothetical protein bcere0017_44530 [Bacillus cereus Rock1-3] gi|228665231|gb|EEL20715.1| hypothetical protein bcere0017_44530 [Bacillus cereus Rock1-3] gi|228678079|gb|EEL32308.1| hypothetical protein bcere0019_44560 [Bacillus cereus Rock3-28] gi|228684225|gb|EEL38170.1| hypothetical protein bcere0020_43940 [Bacillus cereus Rock3-29] gi|228706851|gb|EEL59057.1| hypothetical protein bcere0024_44000 [Bacillus cereus Rock4-18] Length = 201 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +E I + L G E EKV+ LSP F + V E++P+ D I ++ G + +Q+ Sbjct: 72 VETINEILAKNGFE-EKVEAD--LSPKFVVGYVAEKEKHPNADKLNICTVEIGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|325193130|emb|CCA27490.1| unnamed protein product [Albugo laibachii Nc14] Length = 616 Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 97/450 (21%), Positives = 176/450 (39%), Gaps = 105/450 (23%) Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 YD VV+ S+ + S+ II G+H+ T ++L+E Sbjct: 221 YDKEVYPVVMDSNDVVLSLPPIINGEHSKISVKTRNILIECT------------------ 262 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSE---- 410 DL+ VL +V++ C S CI +P +IV+ S Sbjct: 263 --------ATDLRKAKIVLNTMVTMFSQCC---ESPYCI------EPIQIVYEESSSCDE 305 Query: 411 -VKRLSG--IDVPIEDSLRIL--------------------ERLGFSVIGEYDKFEVSVP 447 V L ++V I+D +L +L V + + V +P Sbjct: 306 IVPNLESRQVNVAIQDVYSMLFGQQEPLELDVAHMCKLCDKMQLCARVADDGKELVVQIP 365 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSE---------PLPLTQVEDKRNLSLQQSRTRYV 498 R D+ D++E+I YG + I P PL ++ D+ + Sbjct: 366 PTRSDILHPIDVIEDIGIAYGFNNIPHTIPKTMTYGAPQPLNKLTDQ------------L 413 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLK 554 + ++ ME++ S +++ + + + + + NP + + +RTSL+PG+LK Sbjct: 414 REEISRGGFMELLTHGLCSHDENFKYLNREDDDTSAVVLRNPATIEFEVVRTSLIPGVLK 473 Query: 555 ATGRNVDRAIAD-FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWS------D 607 N + D +FE+S V D A+ +R+ + G + D Sbjct: 474 TIQNNKSLSFKDGLKLFEISDVVLLDP--NSDVGASNVRRICAAYTGLTDGFEIIHGLVD 531 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG--IIKTSAEI-VL 664 + F ++ +A D +S ++ + S+D S P+++ PGR I+ + + L Sbjct: 532 RIMLLVGFRNVVEA-PDIVSKLDIYYSIDP----SSHPTYF-PGRCADVILHSFGKTQCL 585 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G FG HP +L F L++P E+ LD + Sbjct: 586 GSFGVLHPRVLGSFELTHPTSTLEINLDPL 615 >gi|229019924|ref|ZP_04176719.1| hypothetical protein bcere0030_44230 [Bacillus cereus AH1273] gi|229026156|ref|ZP_04182525.1| hypothetical protein bcere0029_44340 [Bacillus cereus AH1272] gi|228735143|gb|EEL85769.1| hypothetical protein bcere0029_44340 [Bacillus cereus AH1272] gi|228741366|gb|EEL91571.1| hypothetical protein bcere0030_44230 [Bacillus cereus AH1273] Length = 201 Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 +EKI + L G E EKV+ + F + V E++P+ D I ++ G + +Q+V Sbjct: 72 VEKINEILAKNGFE-EKVE-ADFTPKFVVGYVAEKEKHPNADKLNICTVEIGT-ETLQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 CGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 129 CGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|323353596|ref|ZP_08088129.1| tRNA binding domain protein [Streptococcus sanguinis VMC66] gi|322121542|gb|EFX93305.1| tRNA binding domain protein [Streptococcus sanguinis VMC66] Length = 208 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I ++ + +Q+V GAPN +VGL + A PG+ +P+ N+ Sbjct: 96 FVVGEIVDMVAHPDSDHLNICQVQVAADKTVQIVAGAPNAKVGLKTIVALPGAMMPKGNL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I ++RG +S GMMCS +EL L + Sbjct: 156 IFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|194017865|ref|ZP_03056474.1| YtpR [Bacillus pumilus ATCC 7061] gi|194010517|gb|EDW20090.1| YtpR [Bacillus pumilus ATCC 7061] Length = 201 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V E++P+ D I ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKEKHPNADKLNICQVDVGD-ETLQIVCGAPNVDQGQYVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +I+ ++RG+ S+GM+CS KEL L D A Sbjct: 151 -SGLIIKDAELRGVPSSGMICSAKELDLPDAPA 182 >gi|71655160|ref|XP_816187.1| phenylalanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70881297|gb|EAN94336.1| phenylalanyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 625 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 68/321 (21%) Query: 410 EVKRLSGI--DVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V+RL GI D P + ++LER+ V E D V VP+ R DV DL+E++ Sbjct: 326 KVERLIGIKLDSP-QHCGQLLERMLHRVAKMEGDNIFVEVPATRPDVLGPTDLMEDVAIA 384 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQ-SRTRYVKRV-LASRAMMEVVNWSFISKEQSVLF 524 YG D IK + + ++ Q S+ ++ R+ +A+ E++ +S S++++ F Sbjct: 385 YGYDNIK-----YVECTTRGKVTQQPLSKLSHLLRIEMANAGYTELLTFSLCSRDEA--F 437 Query: 525 GGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV---- 575 RE + I NP + + R SL+PG+LK N + FE S V Sbjct: 438 AHLNREDDDVAVHIANPRTMEFQICRPSLMPGILKTLNANKSHPLP-LRFFECSDVVLID 496 Query: 576 --------------YENDTPEGQKYMAA-GIRKGSSGIEGSGRL---------WSDKSEE 611 Y N Q+++AA +SG E L S K E+ Sbjct: 497 NEKNFPPLIRPHSEYPNCGACNQRHVAALHCCSENSGFEDIHGLVEFIMKKLSISRKGEQ 556 Query: 612 RCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFG 668 +A+A+ D+ E G + PGR I + ++ LG FG Sbjct: 557 --------NAEAEE----------DTYTLERGTDGAFFPGRCMDIFLHRKDQKVCLGGFG 598 Query: 669 EFHPNILDFFGLSNPICGFEV 689 HPN L + + P E+ Sbjct: 599 VVHPNTLRAYDIPFPCSYMEI 619 >gi|125717090|ref|YP_001034223.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus sanguinis SK36] gi|125497007|gb|ABN43673.1| Phenylalanyl-tRNA synthetase, beta subunit, putative [Streptococcus sanguinis SK36] gi|324994366|gb|EGC26280.1| tRNA binding domain protein [Streptococcus sanguinis SK678] gi|325697775|gb|EGD39659.1| tRNA binding domain protein [Streptococcus sanguinis SK160] Length = 208 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I ++ + +Q+V GAPN +VGL + A PG+ +P+ N+ Sbjct: 96 FVVGEIVDMVAHPDSDHLNICQVQVAADKTVQIVAGAPNAKVGLKTIVALPGAMMPKGNL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I ++RG +S GMMCS +EL L + Sbjct: 156 IFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|325688527|gb|EGD30544.1| tRNA binding domain protein [Streptococcus sanguinis SK72] gi|332364234|gb|EGJ42009.1| tRNA binding domain protein [Streptococcus sanguinis SK1059] Length = 208 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 2/86 (2%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I ++ + +Q+V GAPN +VGL + A PG+ +P+ N+ Sbjct: 96 FVVGEIVDMVAHPDSDHLNICQVQVAADKTVQIVAGAPNAKVGLKTIVALPGAMMPKGNL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I ++RG +S GMMCS +EL L + Sbjct: 156 IFP-GELRGEKSFGMMCSPRELQLPN 180 >gi|312953137|ref|ZP_07771984.1| tRNA binding domain protein [Enterococcus faecalis TX0102] gi|310628880|gb|EFQ12163.1| tRNA binding domain protein [Enterococcus faecalis TX0102] Length = 209 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 8/121 (6%) Query: 14 TDVSLEKICDTLTSIGLE--VEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKH 70 TD +EK+ + G +EK D + + F V S +++PD D +I + + Sbjct: 90 TDEQIEKVNTAIKDAGFSEILEKDDTPKIVVGF----VKSCKKHPDSDHLSITQTEVDNG 145 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPN++ G V A PG+ +P+ MI +RG ES GM+CS KEL L + Sbjct: 146 EILQIVCGAPNIKAGQKVVVAKPGAMMPDGLMIWP-GVLRGEESFGMICSAKELRLPNAP 204 Query: 131 A 131 A Sbjct: 205 A 205 >gi|126651318|ref|ZP_01723525.1| tRNA-binding domain protein [Bacillus sp. B14905] gi|126591847|gb|EAZ85930.1| tRNA-binding domain protein [Bacillus sp. B14905] Length = 204 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F + V + E++P+ D +I ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 FSPKFVVGFVATKEKHPNADKLSICSVNVGD-ETLQIVCGAPNVEAGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ +RG++S GM+CS +EL + + I+ LP DA VG Sbjct: 151 -SGMLIKEGNLRGVDSFGMLCSARELAVPNAPSEKGILVLPEDAIVG 196 >gi|145636220|ref|ZP_01791890.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittHH] gi|145270742|gb|EDK10675.1| phenylalanyl-tRNA synthetase subunit beta [Haemophilus influenzae PittHH] Length = 102 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 3/89 (3%) Query: 717 KRDLAFIVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 +RDLA +V +PAG L+ K ++L+ V +FDV+QG + EG KS+AI +++Q Sbjct: 14 RRDLALVVADSVPAGELIAACKQAGGEKLVQ-VNLFDVYQGVGVAEGYKSLAISLIVQDN 72 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + T D++I ++ ++ V ++ NA LR Sbjct: 73 EKTLEDEEINAVISAVLAEVKQRFNAELR 101 >gi|229152893|ref|ZP_04281075.1| hypothetical protein bcere0011_44250 [Bacillus cereus m1550] gi|228630506|gb|EEK87153.1| hypothetical protein bcere0011_44250 [Bacillus cereus m1550] Length = 201 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI + L G E + EA LSP +V V E++P+ D I +++ G + +Q Sbjct: 72 VEKINEILAKNGFE----ETVEADLSPKIVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|325689561|gb|EGD31566.1| tRNA binding domain protein [Streptococcus sanguinis SK115] Length = 208 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 64/116 (55%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + + L+ G + V++ + F + +++ + +PD D I ++ + Sbjct: 68 TDEQVAILNQELSKEGFPADLVNDSQ--PKFVVGEIVDMVAHPDSDHLNICQVQVAADKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN +VGL + A PG+ +P+ N+I ++RG S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAKVGLKTIVALPGAMMPKGNLIFP-GELRGERSFGMMCSPRELQLPN 180 >gi|229158303|ref|ZP_04286370.1| hypothetical protein bcere0010_44810 [Bacillus cereus ATCC 4342] gi|228625261|gb|EEK82021.1| hypothetical protein bcere0010_44810 [Bacillus cereus ATCC 4342] Length = 201 Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats. Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +EKI L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 72 VEKINGILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 127 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 128 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|255070477|ref|XP_002507320.1| translation initiation factor [Micromonas sp. RCC299] gi|226522595|gb|ACO68578.1| translation initiation factor [Micromonas sp. RCC299] Length = 1525 Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 SP I +++ ++P+ D + +D G ++ +VVCGAPNV+ L ++A G IP Sbjct: 266 SPLLIAEIIDCNQHPNADKLMVCTLDWGGNEPARVVCGAPNVKSKLKVIFARVGVKIPST 325 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVG 143 ++ R ++G+ S GM+ S E+ ++++ ++E P + VG Sbjct: 326 GEVITRRPLKGVMSEGMILSAAEMGWTENAIGVVECPRKSVVG 368 >gi|171185169|ref|YP_001794088.1| phenylalanyl-tRNA synthetase subunit beta [Thermoproteus neutrophilus V24Sta] gi|170934381|gb|ACB39642.1| phenylalanyl-tRNA synthetase, beta subunit [Thermoproteus neutrophilus V24Sta] Length = 516 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 123/557 (22%), Positives = 215/557 (38%), Gaps = 105/557 (18%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 I + +T +R D G+A L G+ ++ E+ + P+ + +E+K D + Sbjct: 41 IKLEVTHDRPDHFSAEGLARTL--KGVAEV-EVGLP-PIEITTSSVELKADHIEER--PY 94 Query: 217 FAMCCVKGVR-------------NNVAPNWMRQRLK-AVGLRSISALVDITNY--VSLDR 260 +M V+GVR + + R R + A+G +S + Y VS D Sbjct: 95 ISMAVVRGVRLDEDAIKQIIQLQEKLHETYGRGRRRFAIGFYDVSRIRPPIYYRRVSQDD 154 Query: 261 GYPSHVFDAS-RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGG 319 Y FD +I+D+ V G+K +L ++E + ++ S G+I + ++G Sbjct: 155 EYTPLGFDRPVKIADMYKVTE--QGQKYSSLIDRERPPA----LVDSSGQIMVVIPVLGS 208 Query: 320 KHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSL 379 + T D+L++V G DL+ + V+ ++ Sbjct: 209 ECCKITTKTRDILIDVT--------------------------GTDLRSVNNVMSILIYA 242 Query: 380 ILSLCGGTASDICIARN-ITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILE--RLGFSVI 436 +L G ++ N + ++ + V L G+D+ ++ R+ E RLG Sbjct: 243 LLERSGEKKVEVVKGGNPYVHSYTRVGVDPARVGELLGVDLDLQRLKRLAEKARLG---- 298 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 Y+ EV VP +R +V D+ E+I + G + + E + + + + T+ Sbjct: 299 --YENGEVVVPPYRINVLSWVDVAEDIALMIGYNALPRETAKVLTGGRRHAVEVA---TQ 353 Query: 497 YVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKAT 556 ++ L S EV N+ L + NPIS +R S++P L+ AT Sbjct: 354 QIRIALLSMGFAEVNNYVLTDSTAYDLCTPAA----VANPISELYEVVRCSIVPQLI-AT 408 Query: 557 GRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV 616 + R + IFEV V +R +S I G + Sbjct: 409 AATLKR--REIKIFEVGEVVRG---------GKTLRSVASVISRDGATLT---------- 447 Query: 617 DLFDAKADALSVIEPFVSLDSLRFESGAPS--WYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 D LSV++ LR + S W P R+ ++ V GY E HP+I Sbjct: 448 -------DGLSVVKALCKRLGLRCQMTHTSLNWALPNRAAAVEGD---VSGYIAEVHPDI 497 Query: 675 LDFFGLSNPICGFEVYL 691 L L P FE++L Sbjct: 498 LAKHNLLVPTVAFELFL 514 >gi|227892847|ref|ZP_04010652.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus ultunensis DSM 16047] gi|227865349|gb|EEJ72770.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus ultunensis DSM 16047] Length = 215 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 6/116 (5%) Query: 36 DNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP 92 D++ A T+V V + E++PD D + + G +E Q+VCGAPN+ G V A Sbjct: 85 DDKLAYGKPTLVYGYVKTCEKHPDSDHLHVTTVQVGDDEEHQIVCGAPNIAQGQKVVVAL 144 Query: 93 PGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVGGRL 146 PG+ +P I K+RG++S GM+CS +EL L + IM +P + VG Sbjct: 145 PGTLMPNGEQIW-PGKLRGVDSYGMICSARELGLPHAPQKRGIMVVPDNFKVGAEF 199 >gi|213511304|ref|NP_001133289.1| Phenylalanyl-tRNA synthetase beta chain [Salmo salar] gi|209149545|gb|ACI32979.1| Phenylalanyl-tRNA synthetase beta chain [Salmo salar] Length = 589 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 88/411 (21%), Positives = 152/411 (36%), Gaps = 73/411 (17%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ NT +V +E Sbjct: 223 VIYDSNGIVLSLPPIINGDHSKISLNTKNVFIECT------------------------- 257 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS-----------DICIARNITYKPRKIVFMNSE 410 DL VL +V++ C + C + Y RK Sbjct: 258 -ATDLTKAKIVLDMMVTMFCEYCEEPFTVEEAEVVYPDGRTCQYPELAY--RKETLSADF 314 Query: 411 VKRLSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + R GI E ++L ++ V+ + ++ EV +P R DV D++E+ YG Sbjct: 315 INRKVGISESTEQIAQLLTKMCLRSEVMSDGEQIEVEIPPTRSDVIHACDIMEDAAMAYG 374 Query: 469 VDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLF 524 + I ++ P T L L + + +++ LA+ E + ++ S+E +L Sbjct: 375 FNNIPRTTPRTYTVAS---QLPLNK-LSELLRQDLAAAGFTEALTFALCSQEDIADKLLK 430 Query: 525 GGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 + R I NP +A+ RT+LL GLLK N + +FE+S V D + Sbjct: 431 NISETRACHISNPKTAEFQVARTTLLSGLLKTVAANRKMPLP-LRLFEISDVVLKDETKD 489 Query: 583 ----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 + + A S G E L R + L + K + Sbjct: 490 VGARNNRRLCAVYYNKSPGFEVIHGLMD-------RVMQLLEVKPG---------QGNGY 533 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 ++ S + PGR I + + G G HP++++ F L+ P ++ Sbjct: 534 HIQAADDSTFFPGRCAEIFAHGKSI-GRLGVLHPDVINRFELTMPCSALDI 583 >gi|48477854|ref|YP_023560.1| phenylalanyl-tRNA synthetase subunit beta [Picrophilus torridus DSM 9790] gi|48430502|gb|AAT43367.1| phenylalanyl-tRNA synthetase beta chain [Picrophilus torridus DSM 9790] Length = 520 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 92/409 (22%), Positives = 162/409 (39%), Gaps = 87/409 (21%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+I + + S+ +I GK + ++T ++ ++ D N RS L + ++ Sbjct: 182 VIIDDENDVLSMPPVINGKKSIVTEDTKNLFFDITGSD-FNAVRSALMLFMYEMHYLNYK 240 Query: 362 RG-VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 D G+ VLK+ ++P K+ ++ +KR GI + Sbjct: 241 VSYADFPGLKGVLKY----------------------DFRPLKL--NDNIIKRYLGISIG 276 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 E+++ L R+G+ + V VP R DV D++E+I + YG + I E +P T Sbjct: 277 RENTIESLRRMGYRAEVSSYGYNVLVPGNRIDVMGDVDIIEDIAKAYGYNNI-DENVPET 335 Query: 481 -------QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK-EQSVLFGGGQRELE 532 ++ D +N+ ++ ++ S E++ + S ++ + GG + Sbjct: 336 SGIARHYKINDFKNI---------IRDIMISSGFQEIMTFVLSSNYYNNIKYDGG---FK 383 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 I NP S D S +R L L N + IFE+ +V Sbjct: 384 IENPKSIDFSVIRDRLYLNFLNFLNINKRNPLPQ-KIFEIGNVIS--------------- 427 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLF-DAKADALSVIEPFVSLDSLRF------ESGAP 645 K+EE+ + D++ D S+ + L SLR E Sbjct: 428 ---------------KTEEKTHLCAMICDSETDYTSIYKILRYL-SLRLSIDFHVEPMDI 471 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 PGRSG+IK + + G GE P I F + NPI E+ ++S+ Sbjct: 472 ETLIPGRSGVIKING-VDAGIIGEMDPEIYTKFDIYNPIAFLEIDVESL 519 >gi|332022375|gb|EGI62687.1| Putative phenylalanyl-tRNA synthetase beta chain [Acromyrmex echinatior] Length = 591 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 101/424 (23%), Positives = 158/424 (37%), Gaps = 91/424 (21%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VV ++G + S+ II G H+ NT ++ +E D +T +R Sbjct: 223 VVYDNNGIVLSLPPIINGDHSKITLNTKNIFIECTATD-------------VTKARI--- 266 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNITYKPRKIVFMNSEV---KRL 414 VL IV C + ++ N T+ ++ + E+ K + Sbjct: 267 ----------VLDTIVCAFSQYCNMKYTAEIVEVVYPDNQTFYYPELKYRTEEINYNKAI 316 Query: 415 S--GIDVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 S GI ++L ++ S + + D V +P R DV D+ E+I YG ++ Sbjct: 317 SYIGIKQTPNQVAKLLSKMSLKSEMKDKDTLMVEIPPTRHDVIHPCDIYEDIAIAYGYNE 376 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE- 530 I+ ++ V + L+ T ++ LA E + +S S+E G + E Sbjct: 377 IEKTIPNISTVAAEFPLN---KLTDQIRMELAQAGFTEALTFSLCSREDIADKLGYKIED 433 Query: 531 ---LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE---- 582 + I NP + + RTSLLPGLLK N R +FEVS V +DT E Sbjct: 434 VPAVHISNPKTLEFQVARTSLLPGLLKTISAN-KRMPLPHKLFEVSDVVLRDDTAEVGAR 492 Query: 583 GQKYMAAGIRKGSSGIEGSGRL-----------WS---DKSEERCRFVDLFDAKADALSV 628 + + A S+G E L WS DKS R D Sbjct: 493 NNRRLCAVYANKSAGFEIIHGLVDRVLLLLEIPWSANKDKSGYYLRAAD----------- 541 Query: 629 IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 D + F P R I E +G G HP++L F L+ P E Sbjct: 542 -------DPMFF---------PQRCAEIVCYGE-AIGKLGVLHPDVLSKFELNIPCSAME 584 Query: 689 VYLD 692 + ++ Sbjct: 585 INIE 588 >gi|314966006|gb|EFT10105.1| tRNA binding domain protein [Propionibacterium acnes HL082PA2] Length = 246 Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats. Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 22/158 (13%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELP 137 ++ RK G S GM+C+ EL + D A I+ LP Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLP 157 >gi|329766512|ref|ZP_08258055.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Nitrosoarchaeum limnia SFB1] gi|329136767|gb|EGG41060.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Nitrosoarchaeum limnia SFB1] Length = 545 Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 71/331 (21%), Positives = 138/331 (41%), Gaps = 43/331 (12%) Query: 376 IVSLILSLCGGT--ASDICIARNITYK--PRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 IV+ IL G + ++ I A+N + K PRKI + + ++ G ++ + L++ Sbjct: 243 IVATILQTAGFSLISTKISGAKNTSPKLEPRKISVNSILINQMLGTNLTNSQIIASLKKS 302 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 I + ++P +R D+ DLVEE+ YG+ ++ P + ++S+ Sbjct: 303 RLDAILKGKNIICTIPPYRFDIFGPMDLVEEVALGYGIQNLEPILSPSQTLGQTNSISV- 361 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTS 547 + + + ++ EV+N S SK+ VL+ RE + +L+ S + + +R S Sbjct: 362 --KLKSLSLIMIGLGYTEVLNSSLTSKK--VLYEMTNREPVNMISVLDSKSQEHTILRDS 417 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSD 607 ++P LL+ RN+ + IFE V+ P + A I Sbjct: 418 IIPELLENLSRNIHASYPQ-KIFETGSVFSRGNPINEATSFAVI---------------- 460 Query: 608 KSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIV 663 + + F ++ AL E ++ HP GR+ I + + + Sbjct: 461 SAHQDASFTEIKSILQSALKT--------GFNLEIETITFTHPTFEEGRTASISVNGKTI 512 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G GE + ++ + + P+ GFE+ L + Sbjct: 513 -GVIGEINSKTIENYKIRVPVVGFEISLSGL 542 >gi|299535409|ref|ZP_07048731.1| phenylalanyl-tRNA synthetase beta chain [Lysinibacillus fusiformis ZC1] gi|298729170|gb|EFI69723.1| phenylalanyl-tRNA synthetase beta chain [Lysinibacillus fusiformis ZC1] Length = 204 Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 63/107 (58%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F + V + +++P+ D +I ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 FSPKFVVGYVETKDKHPNADKLSICSVNVGD-EILQIVCGAPNVEAGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ +RG+ES GM+CS +EL + + I+ LP DA VG Sbjct: 151 -SGMLIKEGNLRGVESYGMLCSARELAIPNAPSEKGILVLPEDAIVG 196 >gi|83319951|ref|YP_424609.1| methionyl/phenylalanyl tRNA synthetase domain-containing protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] gi|83283837|gb|ABC01769.1| methionyl/phenylalanyl tRNA synthetase domain protein [Mycoplasma capricolum subsp. capricolum ATCC 27343] Length = 210 Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K++ +Q++CGA NVR ++ V A S +P I Sbjct: 97 FLIGRIIDCEPIEGTHLNICQVDI-KNEILQIICGASNVRKKMISVVATLNSWLPNGTQI 155 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 V KIRG++S GM+CS KEL + +D I++L Sbjct: 156 VQ-SKIRGVDSFGMLCSYKELNIENDQQGIIDL 187 >gi|294619834|ref|ZP_06699223.1| emap domain protein [Enterococcus faecium E1679] gi|291593931|gb|EFF25416.1| emap domain protein [Enterococcus faecium E1679] Length = 201 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + A Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPA 182 Query: 132 --SIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|257885816|ref|ZP_05665469.1| hypothetical protein EFRG_02120 [Enterococcus faecium 1,231,501] gi|257821672|gb|EEV48802.1| hypothetical protein EFRG_02120 [Enterococcus faecium 1,231,501] Length = 201 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + A Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPA 182 Query: 132 --SIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|257878907|ref|ZP_05658560.1| hypothetical protein EFPG_00993 [Enterococcus faecium 1,230,933] gi|257881542|ref|ZP_05661195.1| hypothetical protein EFQG_00676 [Enterococcus faecium 1,231,502] gi|257890763|ref|ZP_05670416.1| hypothetical protein EFTG_01532 [Enterococcus faecium 1,231,410] gi|257899541|ref|ZP_05679194.1| hypothetical protein EFWG_01889 [Enterococcus faecium Com15] gi|258615023|ref|ZP_05712793.1| tRNA-binding domain-containing protein [Enterococcus faecium DO] gi|261207188|ref|ZP_05921877.1| t-RNA-binding domain-containing protein [Enterococcus faecium TC 6] gi|289565309|ref|ZP_06445760.1| tRNA binding domain-containing protein [Enterococcus faecium D344SRF] gi|293556948|ref|ZP_06675509.1| emap domain protein [Enterococcus faecium E1039] gi|293560328|ref|ZP_06676825.1| emap domain protein [Enterococcus faecium E1162] gi|293567739|ref|ZP_06679080.1| emap domain protein [Enterococcus faecium E1071] gi|294616127|ref|ZP_06695932.1| emap domain protein [Enterococcus faecium E1636] gi|294620851|ref|ZP_06700053.1| emap domain protein [Enterococcus faecium U0317] gi|314939000|ref|ZP_07846265.1| tRNA binding domain protein [Enterococcus faecium TX0133a04] gi|314943448|ref|ZP_07850215.1| tRNA binding domain protein [Enterococcus faecium TX0133C] gi|314949288|ref|ZP_07852632.1| tRNA binding domain protein [Enterococcus faecium TX0082] gi|314952716|ref|ZP_07855694.1| tRNA binding domain protein [Enterococcus faecium TX0133A] gi|314991347|ref|ZP_07856825.1| tRNA binding domain protein [Enterococcus faecium TX0133B] gi|314994852|ref|ZP_07859979.1| tRNA binding domain protein [Enterococcus faecium TX0133a01] gi|257813135|gb|EEV41893.1| hypothetical protein EFPG_00993 [Enterococcus faecium 1,230,933] gi|257817200|gb|EEV44528.1| hypothetical protein EFQG_00676 [Enterococcus faecium 1,231,502] gi|257827123|gb|EEV53749.1| hypothetical protein EFTG_01532 [Enterococcus faecium 1,231,410] gi|257837453|gb|EEV62527.1| hypothetical protein EFWG_01889 [Enterococcus faecium Com15] gi|260078816|gb|EEW66518.1| t-RNA-binding domain-containing protein [Enterococcus faecium TC 6] gi|289162965|gb|EFD10814.1| tRNA binding domain-containing protein [Enterococcus faecium D344SRF] gi|291589324|gb|EFF21131.1| emap domain protein [Enterococcus faecium E1071] gi|291591004|gb|EFF22708.1| emap domain protein [Enterococcus faecium E1636] gi|291599553|gb|EFF30568.1| emap domain protein [Enterococcus faecium U0317] gi|291601032|gb|EFF31323.1| emap domain protein [Enterococcus faecium E1039] gi|291605778|gb|EFF35215.1| emap domain protein [Enterococcus faecium E1162] gi|313590834|gb|EFR69679.1| tRNA binding domain protein [Enterococcus faecium TX0133a01] gi|313594021|gb|EFR72866.1| tRNA binding domain protein [Enterococcus faecium TX0133B] gi|313595187|gb|EFR74032.1| tRNA binding domain protein [Enterococcus faecium TX0133A] gi|313597820|gb|EFR76665.1| tRNA binding domain protein [Enterococcus faecium TX0133C] gi|313641709|gb|EFS06289.1| tRNA binding domain protein [Enterococcus faecium TX0133a04] gi|313644331|gb|EFS08911.1| tRNA binding domain protein [Enterococcus faecium TX0082] Length = 201 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + A Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPA 182 Query: 132 --SIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|228948441|ref|ZP_04110723.1| hypothetical protein bthur0007_45670 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811200|gb|EEM57539.1| hypothetical protein bthur0007_45670 [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 201 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 ++KI + L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VKKINEILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 179 >gi|314919431|gb|EFS83262.1| tRNA binding domain protein [Propionibacterium acnes HL050PA1] gi|314923953|gb|EFS87784.1| tRNA binding domain protein [Propionibacterium acnes HL001PA1] gi|328757795|gb|EGF71411.1| tRNA binding domain protein [Propionibacterium acnes HL025PA2] Length = 191 Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 27/190 (14%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + +K+ LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQAMVNLPDGTTTDKVAKALTNHTATVEKVEVVGGELTGPIVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + ++ R+D G + ++CGAPN G V + PG+ +P Sbjct: 61 QKNGKVINWCRVDVGPRYNAEGHPKNIEEGVEGRGIICGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D A I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDDAGIITLPPSVEGHQLVPGEDALPILGVPE 179 Query: 155 PIIDVSLTPN 164 ++DV +TP+ Sbjct: 180 EVLDVDVTPD 189 >gi|260583457|ref|ZP_05851205.1| tRNA-binding domain protein [Granulicatella elegans ATCC 700633] gi|260158083|gb|EEW93151.1| tRNA-binding domain protein [Granulicatella elegans ATCC 700633] Length = 204 Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 3/73 (4%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA- 131 +Q+VCGAPNV+ G V A PG+ +P N I+ ++RG+ES GM+CS +EL L + A Sbjct: 128 LQIVCGAPNVKAGQKVVVATPGTVMP-NGSIIWSGELRGVESHGMLCSARELGLENAPAK 186 Query: 132 -SIMELPIDAPVG 143 I+ L DA +G Sbjct: 187 KGILVLNDDAVIG 199 >gi|28950394|emb|CAD71236.1| probable phenylalanine--tRNA ligase (EC 6.1.1.20) alpha chain [Neurospora crassa] Length = 685 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 49/321 (15%) Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLV 460 M+ EV L+ G+ E ++L ++ ++ + + + +VSVP R DV D++ Sbjct: 376 MDVEVDYLNQCCGLQESPESLCKLLGKMAYTAVPDKEDAKLIKVSVPPTRADVLHACDVM 435 Query: 461 EEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 E++ YG + + +PL + +V D V+ A +EV Sbjct: 436 EDVAIAYGYNNLPRTSPNQASTIGKPLMINKVSD------------IVRNECAMAGWIEV 483 Query: 511 VNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + S E++ + GQ +++ NP S + +RTSLLPGLLK N + Sbjct: 484 MPLILCSHEENFEWLNRVDDGQTAVKLANPKSVEYQVVRTSLLPGLLKTLRENKSVRLP- 542 Query: 567 FAIFEVSHV-YENDTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---- 616 I EV+ + +++T E +++ AA +SG E G L S R FV Sbjct: 543 LKITEVADIALKDETKERKARNERHFAAAFYGKTSGFEVVHGLLDRILSMLRVSFVTHEE 602 Query: 617 DLFDAKADALSVIEPFVSLDSLRF--ESGAPSWYHPGRSGII--KTSAEI-VLGYFGEFH 671 DL D P + F E P+++ GR+ I + E +G FG H Sbjct: 603 DLHGKSIDYKVAENPSEEKGNGYFIKEIDEPTFFQ-GRAAAIYLRLGGETRRIGEFGVLH 661 Query: 672 PNILDFFGLSNPICGFEVYLD 692 P +L+ F L P+ EV L+ Sbjct: 662 PTVLEKFDLRYPVSVLEVNLE 682 >gi|228475930|ref|ZP_04060639.1| phenylalanine--tRNA ligase [Staphylococcus hominis SK119] gi|314936162|ref|ZP_07843509.1| tRNA-binding domain protein [Staphylococcus hominis subsp. hominis C80] gi|228270001|gb|EEK11475.1| phenylalanine--tRNA ligase [Staphylococcus hominis SK119] gi|313654781|gb|EFS18526.1| tRNA-binding domain protein [Staphylococcus hominis subsp. hominis C80] Length = 198 Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 76/135 (56%), Gaps = 9/135 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 +E I ++T+ G + + LSP F + V + E++P+ D +IL++D +++Q+ Sbjct: 69 VEAIQQSITNAGFDYQL---EADLSPKFVVGYVETKEKHPNADKLSILKVDVSS-EKLQI 124 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASI 133 VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L + I Sbjct: 125 VCGAPNVEAGQKVVVAKVGAVMP-SGMVIKDAELRGVASSGMICSMRELNLPNAPQEKGI 183 Query: 134 MELPIDAPVGGRLSD 148 M L D VG D Sbjct: 184 MVLSDDYKVGNAFFD 198 >gi|300361169|ref|ZP_07057346.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] gi|300353788|gb|EFJ69659.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus gasseri JV-V03] Length = 215 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 ++RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ELRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFNAG 196 >gi|196033264|ref|ZP_03100677.1| putative tRNA binding domain protein [Bacillus cereus W] gi|218905921|ref|YP_002453755.1| putative tRNA binding domain protein [Bacillus cereus AH820] gi|195994693|gb|EDX58648.1| putative tRNA binding domain protein [Bacillus cereus W] gi|218537508|gb|ACK89906.1| putative tRNA binding domain protein [Bacillus cereus AH820] Length = 204 Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 7/113 (6%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQV 75 ++KI + L G E E V+ LSP F + V E++P+ D I +++ G + +Q+ Sbjct: 75 VKKINEILAKNGFE-ETVE--ADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQI 130 Query: 76 VCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 VCGAPNV G V A G+ +P + M++ ++RG+ S GM+CS +EL L D Sbjct: 131 VCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSAGMICSARELELPD 182 >gi|229032348|ref|ZP_04188320.1| hypothetical protein bcere0028_43900 [Bacillus cereus AH1271] gi|228728956|gb|EEL79960.1| hypothetical protein bcere0028_43900 [Bacillus cereus AH1271] Length = 201 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 9/114 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +E+I L G E + EA LSP F + V E++P+ D I +++ G + +Q Sbjct: 72 VEQINGILAKNGFE----ETVEADLSPKFVVGYVAEKEKHPNADKLNICKVEIGT-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 127 IVCGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|116630063|ref|YP_815235.1| EMAP domain-containing protein [Lactobacillus gasseri ATCC 33323] gi|116095645|gb|ABJ60797.1| EMAP domain [Lactobacillus gasseri ATCC 33323] Length = 215 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 ++RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ELRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFNAG 196 >gi|203284423|ref|YP_002222163.1| phenylalanyl-tRNA synthetase beta chain [Borrelia duttonii Ly] gi|238690567|sp|B5RM71|SYFB_BORDL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|201083866|gb|ACH93457.1| phenylalanyl-tRNA synthetase beta chain [Borrelia duttonii Ly] Length = 564 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 71/287 (24%), Positives = 120/287 (41%), Gaps = 25/287 (8%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V +L G + D L++LG S E D F + P +R D + D++EE++ G+ Sbjct: 298 VNKLLGSNFTANDMCLDLKKLGISAYFEESDTFYIMPPVYRNDFLHEVDVIEEVMIGKGL 357 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGG 527 D KSE LP K LS + +R V+ ++ E++ SK + + G Sbjct: 358 DNFKSE-LPKDFTIGK--LSPIEEFSRSVRNLMIGMGFQEMIYNYLGSKVDFIEKMNIKG 414 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 L + NP++ +R S++ LLK+ + + IFE+ V D + Sbjct: 415 SELLSVSNPMTESYEYIRGSIISDLLKSESISSNFPYPH-KIFEIGKVALKDLVSDE--- 470 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G+ + L +DK L + L++ + + + + Sbjct: 471 ------GTVTYDNLAFLMADKEFSFNEINSLVSSLFYYLNI--------GFKVKESSKNL 516 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 Y GR I + +IVLG FGE P IL FG+ P C E+ ++ + Sbjct: 517 YIDGRGADILVN-DIVLGSFGEVSPYILSNFGIMVPCCVLEININGL 562 >gi|238853750|ref|ZP_04644116.1| putative tRNA-binding protein [Lactobacillus gasseri 202-4] gi|238833559|gb|EEQ25830.1| putative tRNA-binding protein [Lactobacillus gasseri 202-4] Length = 215 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 4/98 (4%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVDVGNGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGQQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 ++RG++S GM+CS +EL L+ IM +P D G Sbjct: 159 ELRGVDSYGMICSARELGLAHAPQKRGIMVVPDDFNAG 196 >gi|229585511|ref|YP_002844013.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus islandicus M.16.27] gi|259511896|sp|C3N028|SYFB_SULIA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|228020561|gb|ACP55968.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus islandicus M.16.27] Length = 545 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 90/407 (22%), Positives = 161/407 (39%), Gaps = 75/407 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D+ T D ++V Sbjct: 191 IVQDDGEVLSIPPIINSNKTRLDETTKDFFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + + ++ KI + E VK++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVLKSANSSQLSSPLFLHKIQNVREEYVKKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T ++L + R ++ + +E+ N+ I E+ LF + ++IL Sbjct: 344 SKYISTNYGSYDYMTLLE---RKIRELGIGAGYVEISNFVLIKDEK--LFSN--KYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDTPEGQKYMAAGIR 592 NP++ + + +R SL+PGLL +N A +FE VY++ T G Sbjct: 397 NPVTDEYNAVRNSLIPGLLDFLSKN-QHAKFPIRVFETGDVVVYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL----RFESGAPSW 647 ++++R + + D K + P L SL ++ + Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + GRS I E +G GE +P++L FG+ P E+Y+ I Sbjct: 492 FIEGRSASIFYENE-KMGVIGEVNPDVLIRFGIEYPAVIAELYISEI 537 >gi|311031279|ref|ZP_07709369.1| PheRS aminoacylate phenylalanine transfer RNA [Bacillus sp. m3-13] Length = 205 Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats. Identities = 35/93 (37%), Positives = 58/93 (62%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V E++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 95 LSPKFVVGHVTEKEKHPNADKLSVCKVDVGT-EVLQIVCGAPNVDSGQYVVVAKVGAVMP 153 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +++ ++RG+ S+GM+CS KEL L + A Sbjct: 154 -SGLVIRDAELRGVASSGMICSAKELDLPNAPA 185 >gi|163942423|ref|YP_001647307.1| tRNA-binding domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229062378|ref|ZP_04199694.1| hypothetical protein bcere0026_44470 [Bacillus cereus AH603] gi|229169425|ref|ZP_04297133.1| hypothetical protein bcere0007_43750 [Bacillus cereus AH621] gi|163864620|gb|ABY45679.1| t-RNA-binding domain protein [Bacillus weihenstephanensis KBAB4] gi|228614030|gb|EEK71147.1| hypothetical protein bcere0007_43750 [Bacillus cereus AH621] gi|228716849|gb|EEL68536.1| hypothetical protein bcere0026_44470 [Bacillus cereus AH603] Length = 201 Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 5/112 (4%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 +EKI L G E EKV+ + F + V E++P+ D I ++ G + +Q+V Sbjct: 72 VEKINGILAKNGFE-EKVE-ADFTPKFVVGYVAEKEKHPNADKLNICTVEIGT-ETLQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 CGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 129 CGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|289673308|ref|ZP_06494198.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 112 Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats. Identities = 29/74 (39%), Positives = 43/74 (58%) Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 ++R+L +R E + +SFI + LF G + L + NPIS DM+ MR SL PGL+K Sbjct: 19 LRRLLVARGYQEAITYSFIDPKWFELFSPGAKPLLLANPISNDMAAMRASLWPGLVKVLQ 78 Query: 558 RNVDRAIADFAIFE 571 N++R +FE Sbjct: 79 HNLNRQQDRVRMFE 92 >gi|257456884|ref|ZP_05622065.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema vincentii ATCC 35580] gi|257445593|gb|EEV20655.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema vincentii ATCC 35580] Length = 580 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 26/287 (9%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V +L G ++ +D + LER+ +V E D ++ P++R D + D++E+++ V+ Sbjct: 309 VNKLLGTELSAQDIVEALERMDNTVTVEGDCLTLTPPAYRNDFLHEVDIIEDVMMGKTVE 368 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGG 527 + E P T LS +R +K ++ E++ SK+ + + G Sbjct: 369 FFEPETPREFT----IGRLSPVTVLSRKIKSLMVGFGYQEMIFNYLGSKKDYIDRMNIDG 424 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 +EI NP+S + +R S++P LL A + A+ IFE + Y+ Sbjct: 425 AAVIEIANPMSENYQFVRPSIIPSLLSAETVS-GNAVYPHRIFETGKI---------AYL 474 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 A G+ + G L ++ F+ A ++ + ++ +D E+ + Sbjct: 475 APEENTGTRTRQSLGFLTVNQDAN-------FNEAASLVAGLLYYLQMDYAVCETHDSRF 527 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++G++ +I G FGE HP +L+ + ++ P E+ ++SI Sbjct: 528 IEGRQAGVLYEGKQI--GIFGELHPQVLENWSVTVPAFAGELDIESI 572 >gi|229135533|ref|ZP_04264317.1| hypothetical protein bcere0014_44260 [Bacillus cereus BDRD-ST196] gi|228647913|gb|EEL03964.1| hypothetical protein bcere0014_44260 [Bacillus cereus BDRD-ST196] Length = 201 Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 5/112 (4%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 +EKI L G E EKV+ + F + V E++P+ D I ++ G + +Q+V Sbjct: 72 VEKINGILAKNGFE-EKVE-ADFTPKFVVGYVAEKEKHPNADKLNICTVEIGT-ETLQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 CGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 129 CGAPNVDAGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|221055804|ref|XP_002259040.1| phenylalanine--trna ligase [Plasmodium knowlesi strain H] gi|193809111|emb|CAQ39813.1| phenylalanine--trna ligase, putative [Plasmodium knowlesi strain H] Length = 617 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 98/455 (21%), Positives = 186/455 (40%), Gaps = 100/455 (21%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWD------PINIARS 346 +++D P V++ +D +I S+ II H +T ++ +E D +NI S Sbjct: 204 KDFDKFP--VIVDADNQILSLPPIINCDHTKITYDTKNLFIECTAIDKNKAEIAVNIICS 261 Query: 347 G-----------KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR 395 + + D +++ E+G + PV K+ S C Sbjct: 262 MLSEYCTPKYAIHSFFVQYDRKHKAEKGNGY--LYPVFKN------------KSLTC--- 304 Query: 396 NITYKPRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDV 453 +I Y V++LSGI D+ ++D +L+++ S + + F V VP +R D+ Sbjct: 305 HIDY-----------VRKLSGILDLSVKDVEPLLKKMMISSKVIDSSTFTVDVPFYRSDI 353 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNW 513 D+VE+I YG I SE + ++ K +LS + T + VL+ EV+ Sbjct: 354 MHCCDIVEDIAIAYGYGNIVSEKI---EIAKKNSLS---AYTELFRNVLSECTYTEVMTN 407 Query: 514 SFISKEQSV------------------LFGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 + +SK ++ + ++I+N +++ +RTSL+ +LK Sbjct: 408 ALLSKRENYDCMLRKPRDYNDDRINLDEYNPLAPPVQIMNSKTSEYEIVRTSLIVNMLKF 467 Query: 556 TGRNVDRAIA--DFAIFEVSHVYENDTPE---GQKYMA--------AGIRKGSSGIE--- 599 N R + F I +VS+ N T ++Y++ AG+ + +E Sbjct: 468 VSANKHRELPLRFFEIGDVSYTTYNKTDTNAVNKRYLSVIFADKFTAGLEEAHGMLETVL 527 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 +L+SD E R ++ ++D + P PS+ + I+ Sbjct: 528 KEFQLFSDYKIEEKRKENV-AIRSDVFYKLVP----------KEDPSFLNERVVDIVLCP 576 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + G G HP +L+ F + P+ E+ +++I Sbjct: 577 HNLKFGIMGIIHPKVLENFSIDIPVSVIEINIETI 611 >gi|46122107|ref|XP_385607.1| hypothetical protein FG05431.1 [Gibberella zeae PH-1] Length = 609 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 95/411 (23%), Positives = 174/411 (42%), Gaps = 60/411 (14%) Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S+ II G H+ +TT+V +E+ A L I+TD V + M Sbjct: 226 SLPPIINGDHSKITLDTTNVFIEIT-------ATDLTKLDIVTDIM------VTMFSMYC 272 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPR----KIVFMNSEVKRLSGIDVPIEDSLRI 427 V + + + I N+ KPR +I ++NS +G++ E ++ Sbjct: 273 SEPFTVEPV-QINSDHNNQTRITPNL--KPRVAEVEIDYLNS----CTGLNESPESLCKL 325 Query: 428 LERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------S 474 L ++ ++ + + EV++P R DV + D++E++ YG + + Sbjct: 326 LSKMSYTSTPSSKDANILEVAIPPTRADVLHQCDVMEDLAVCYGYNNLPRTAPSRSATVG 385 Query: 475 EPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEI 533 PLP+ ++ D R + + + +L S N+++++++ G + + Sbjct: 386 APLPVNKLSDIIRIETAVAGWSEVMPLILCSHDE----NFAWLNRKDD-----GNTVVRL 436 Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE----GQKYMA 588 NP +A+ +R+SLLPGLLK N ++ IFEVS V++++T E +++ A Sbjct: 437 ANPKTAEYQVVRSSLLPGLLKTIRENKGHSVP-MKIFEVSDVVFKDETQERKARNERHFA 495 Query: 589 AGIRKGSSGIE-GSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLRFESGA 644 A +SG E G L R F+ + K+ V E D E Sbjct: 496 AAWYGRTSGFEVVHGLLDRILLMLRTSFLTHEEGLSGKSIDFEVKENPSKPDGYWIEELD 555 Query: 645 PSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + + G + + E +G FG HP++L+ F L P+ E+ L+ Sbjct: 556 DATFFAGHAASVYLRLGGKERRVGEFGILHPSVLEKFDLKYPVSTLEINLE 606 >gi|328862130|gb|EGG11232.1| hypothetical protein MELLADRAFT_115324 [Melampsora larici-populina 98AG31] Length = 623 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 77/329 (23%), Positives = 132/329 (40%), Gaps = 45/329 (13%) Query: 401 PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFE----------------- 443 P+ S + ++G+ + EDS ++L ++G + K + Sbjct: 298 PQTFAIRQSYINSVTGLKLSPEDSCKLLAKMGHNASSCVSKTDLTKAINTSTSEQISNAP 357 Query: 444 ------VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY 497 V VP R D+ + DLVE++ YG + ++ + P T K + S Sbjct: 358 LSDLIIVQVPPTRPDILHECDLVEDVAISYGFNNLQ-QTFPSTNTVGKPYEINKLSD--L 414 Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLL 553 V++ A +EV+ + S +++ F + + + NP + + +RTSLLPGLL Sbjct: 415 VRKECAFAGWLEVLPLTLCSHDENFAFLRRPDDKTKAVVLSNPATIEFQVVRTSLLPGLL 474 Query: 554 KATGRNVDRAIADFAIFEVSH-VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 K N A+ IFEVS V ++DT E + A +R+ + G + Sbjct: 475 KTIKENRKEALP-IRIFEVSDIVLKDDTLERK---AKNVRRLGAAFVGKKAGFEVIHGLL 530 Query: 613 CRFVDLFDAK--ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-------KTSAEIV 663 R + + + D S + E + PGRS I ++ EI+ Sbjct: 531 DRIMAMLEVNWSGDDGSGKKKTGKKGEYYIEQSEDPTFFPGRSAKIMFKPISSSSNHEII 590 Query: 664 -LGYFGEFHPNILDFFGLSNPICGFEVYL 691 +G G HP++L F L P E+ L Sbjct: 591 EIGQLGILHPDVLKNFELDYPCSTLEIDL 619 >gi|195504872|ref|XP_002099265.1| GE10814 [Drosophila yakuba] gi|194185366|gb|EDW98977.1| GE10814 [Drosophila yakuba] Length = 589 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 67/292 (22%), Positives = 111/292 (38%), Gaps = 39/292 (13%) Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 GID P E +L R+ + D V +P R DV D+ E++ YG + IK Sbjct: 319 GIDEPAEKLADMLTRMYLEAKVDGDSLVVKIPPTRHDVIHACDIYEDVAIAYGYNNIKKS 378 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR------ 529 Q+ + L+ T ++ +A E + ++ S++ G++ Sbjct: 379 LPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDDI-----GRKLNKNID 430 Query: 530 ---ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + I NP + + +RT+LLPGLLK N + +FE+S V D Sbjct: 431 ALPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVVAD------- 482 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLR---F 640 G R+ + + F L D LSV P+ + + Sbjct: 483 -----ESTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQLLSV--PWKTASGSKGYYL 535 Query: 641 ESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 ++ Y PGR + +V+G G HP +L F L+ P E ++ Sbjct: 536 QATEDPSYFPGRCANVMYDG-VVIGKIGVLHPTVLQAFELTTPCSAVEFTIE 586 >gi|164423194|ref|XP_958826.2| phenylalanyl-tRNA synthetase beta chain [Neurospora crassa OR74A] gi|157069986|gb|EAA29590.2| phenylalanyl-tRNA synthetase beta chain [Neurospora crassa OR74A] Length = 643 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 49/321 (15%) Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLV 460 M+ EV L+ G+ E ++L ++ ++ + + + +VSVP R DV D++ Sbjct: 334 MDVEVDYLNQCCGLQESPESLCKLLGKMAYTAVPDKEDAKLIKVSVPPTRADVLHACDVM 393 Query: 461 EEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 E++ YG + + +PL + +V D V+ A +EV Sbjct: 394 EDVAIAYGYNNLPRTSPNQASTIGKPLMINKVSD------------IVRNECAMAGWIEV 441 Query: 511 VNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 + S E++ + GQ +++ NP S + +RTSLLPGLLK N + Sbjct: 442 MPLILCSHEENFEWLNRVDDGQTAVKLANPKSVEYQVVRTSLLPGLLKTLRENKSVRLP- 500 Query: 567 FAIFEVSHV-YENDTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---- 616 I EV+ + +++T E +++ AA +SG E G L S R FV Sbjct: 501 LKITEVADIALKDETKERKARNERHFAAAFYGKTSGFEVVHGLLDRILSMLRVSFVTHEE 560 Query: 617 DLFDAKADALSVIEPFVSLDSLRF--ESGAPSWYHPGRSGII--KTSAEI-VLGYFGEFH 671 DL D P + F E P+++ GR+ I + E +G FG H Sbjct: 561 DLHGKSIDYKVAENPSEEKGNGYFIKEIDEPTFFQ-GRAAAIYLRLGGETRRIGEFGVLH 619 Query: 672 PNILDFFGLSNPICGFEVYLD 692 P +L+ F L P+ EV L+ Sbjct: 620 PTVLEKFDLRYPVSVLEVNLE 640 >gi|194746428|ref|XP_001955682.1| GF18885 [Drosophila ananassae] gi|190628719|gb|EDV44243.1| GF18885 [Drosophila ananassae] Length = 590 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 100/431 (23%), Positives = 154/431 (35%), Gaps = 96/431 (22%) Query: 298 SPDNVVIASDGRI-QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 SP VI R+ S+ II G H+ NT +V +E Sbjct: 217 SPVYPVIYDAKRVVLSLPPIINGDHSKISLNTKNVFIECT-------------------- 256 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEV----- 411 DL VL IV L C A+ T +P +V + V Sbjct: 257 ------ATDLTKAKVVLDTIVCLFSEHC---------AQKFTVEPCDVVQTDGSVISYPE 301 Query: 412 -----KRLS--------GIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEK 456 +R+S GID P E +L R+ V GE D V +P R DV Sbjct: 302 LQVREERISAKKANAYIGIDEPAEKLADMLTRMYLEAKVDGE-DSLAVKIPPTRHDVIHP 360 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 D+ E+I +G + IK Q+ + L+ T ++ +A E + ++ Sbjct: 361 CDIYEDIAIAFGYNNIKKSLPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLC 417 Query: 517 SKEQSVLFGGGQR---------ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 S++ G++ + I NP + + +RT+LLPGLLK N + Sbjct: 418 SRDDI-----GRKLNKTIEAIPAVHIGNPKTLEFQVVRTTLLPGLLKTLVANRKMPLP-L 471 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKAD 624 +FE+S V D G R+ + + F L D Sbjct: 472 KLFEISDVVVAD------------ENTEVGARNERRVCAVNCNKTAGFEVVHGLLDRVMQ 519 Query: 625 ALSVIEPFVSLDSLR---FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 LSV P+ S + + ++ Y PGR + +V+G G HP +L F L+ Sbjct: 520 LLSV--PWKSGNVTKGYYLQAAEDPSYFPGRCANVMYD-NVVIGKIGVLHPTVLQAFELT 576 Query: 682 NPICGFEVYLD 692 P E ++ Sbjct: 577 TPCSAVEFTIE 587 >gi|303389004|ref|XP_003072735.1| phenylalanyl-tRNA synthetase subunit beta [Encephalitozoon intestinalis ATCC 50506] gi|303301877|gb|ADM11375.1| phenylalanyl-tRNA synthetase subunit beta [Encephalitozoon intestinalis ATCC 50506] Length = 557 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 13/170 (7%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 E+ R G+D+ +E + +ER+ I + +V V R DV K DL+E++ +G Sbjct: 287 EINRRLGLDLSLEVAKTYMERMMHKASIVDGKTLQVKVHDIRSDVIHKCDLIEDVAIAHG 346 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM---EVVNWSFISKEQSVLFG 525 + K E LPL + + R+ ++ ++M E + + +S++++++ Sbjct: 347 FNNFKRE-LPLIS-----TIGSEDPLNRFSDKLRMELSIMGFDEALTLTLLSRQENII-- 398 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + ++NP S RTSL+PGL+K N+ I F +FEVS V Sbjct: 399 DGDLAVVLMNPKSIGYEVCRTSLIPGLMKTVASNLHVKIP-FKLFEVSDV 447 >gi|257887828|ref|ZP_05667481.1| hypothetical protein EFSG_01380 [Enterococcus faecium 1,141,733] gi|257893377|ref|ZP_05673030.1| hypothetical protein EFUG_01214 [Enterococcus faecium 1,231,408] gi|257823882|gb|EEV50814.1| hypothetical protein EFSG_01380 [Enterococcus faecium 1,141,733] gi|257829756|gb|EEV56363.1| hypothetical protein EFUG_01214 [Enterococcus faecium 1,231,408] Length = 201 Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + + Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPE 182 Query: 130 SASIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|332685654|ref|YP_004455428.1| tRNA binding domain-containing protein [Melissococcus plutonius ATCC 35311] gi|332369663|dbj|BAK20619.1| tRNA binding domain protein [Melissococcus plutonius ATCC 35311] Length = 208 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D ++K+ L + G + ++++E F + V + E+ P+ D +I + + + Sbjct: 70 SDTQIDKLNQVLQTSGFTDKLINDQEP--KFVVGYVKTCEKLPNSDHLSITQTEVDHGEV 127 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q++CGAPN++ G + A G+ +P+ I+ +RG+ES GM+CS EL L + Sbjct: 128 LQIICGAPNIQAGQKVIVAKSGAMMPD-GQIIWPGALRGVESFGMICSANELGLKNAPSK 186 Query: 131 ASIMELPIDAPVG 143 IM L DA +G Sbjct: 187 KGIMVLSDDAKIG 199 >gi|229013899|ref|ZP_04171026.1| hypothetical protein bmyco0001_43080 [Bacillus mycoides DSM 2048] gi|228747369|gb|EEL97245.1| hypothetical protein bmyco0001_43080 [Bacillus mycoides DSM 2048] Length = 201 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 5/112 (4%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 +EKI L G E EKV+ + F + V E++P+ D I ++ G + +Q+V Sbjct: 72 VEKINGILAKNGFE-EKVE-ADFTPKFVVGYVAEKEKHPNADKLNICTVEIGT-ETLQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 CGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS +EL L D Sbjct: 129 CGAPNVDSGQKVVVAKIGAVMP-SGMLIKPAELRGVPSSGMICSARELELPD 179 >gi|295425333|ref|ZP_06818036.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] gi|295065109|gb|EFG56014.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus amylolyticus DSM 11664] Length = 214 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 38/98 (38%), Positives = 57/98 (58%), Gaps = 5/98 (5%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E++PD D + +D G +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEKHPDSDHLHVTTVDVGG-EEYQIVCGAPNIAQGQKVVVALPGTLMP-NGAQIWPG 157 Query: 108 KIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVG 143 ++RG++S GM+CS +EL L + IM +P D VG Sbjct: 158 ELRGVDSYGMICSARELGLPHAPQKRGIMVVPDDFQVG 195 >gi|328464660|gb|EGF36006.1| phenylalanyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463] Length = 215 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKH 70 +D L + L +G D++ A T+V V + E++PD D + ++ G Sbjct: 68 SDDELAALNKKLAEVGF-----DDKLAYGKPTLVYGYVKTCEKHPDSDHLHVTTVEVGDG 122 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SD 128 +E Q+VCGAPN+ G V A PG+ +P I +RG++S GM+CS +EL L + Sbjct: 123 EEHQIVCGAPNIAQGQKVVVALPGTLMPNGEQIWP-GALRGVDSYGMICSARELGLPHAP 181 Query: 129 DSASIMELPIDAPVGGRL 146 IM +P + VG Sbjct: 182 QKRGIMVVPDNFEVGAEF 199 >gi|167044078|gb|ABZ08762.1| putative tRNA synthetase B5 domain protein [uncultured marine crenarchaeote HF4000_APKG5B22] Length = 512 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 15/227 (6%) Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICIA--RNIT--YKPRKIVFMNSEVKRLSGID 418 G+D Q +L +V +IL G S + ++ +N T + PR I V ++ G++ Sbjct: 232 GIDKQSAEDMLS-VVVIILQGAGFQFSQLKVSGSKNSTPNFAPRSIALDADPVNKILGLN 290 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + + L++ + K + ++P +R D+ D+VEE+ YG+D++K Sbjct: 291 ISGSMLVSCLKKCRLDASMKGKKIQCTIPRYRFDIFGGMDIVEEVALGYGIDKLKPAWPA 350 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEIL 534 + +K ++ + + R++ ME +N + S++ +L+ R+ + + Sbjct: 351 SVHIGEK---NMTSEKLDSISRLMTGFGFMETLNSTLTSEQ--ILYDMSNRDSSQMISVT 405 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + S + + +R S+LPGLL+ +N+ FE V+ D+P Sbjct: 406 SSKSQEHAILRDSILPGLLENLSKNIHETYPQ-KFFESGIVFSKDSP 451 >gi|319945747|ref|ZP_08019998.1| tRNA binding domain protein [Streptococcus australis ATCC 700641] gi|319748107|gb|EFW00350.1| tRNA binding domain protein [Streptococcus australis ATCC 700641] Length = 208 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + ++ L + G V+++E F + +++ + +PD D I ++ G + Sbjct: 68 SDEQVARLNQELQAEGFAEVLVNDKE--PKFVVGQIVEMVAHPDSDHLNICQVAVGLDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V GAPN R GL + A PG+ +P+ ++I +RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAREGLKTIVALPGAMMPDGSLIFP-GALRGEKSFGMMCSPRELHLPN 180 >gi|260103193|ref|ZP_05753430.1| tRNA binding domain protein [Lactobacillus helveticus DSM 20075] gi|260082984|gb|EEW67104.1| tRNA binding domain protein [Lactobacillus helveticus DSM 20075] gi|323466062|gb|ADX69749.1| Phenylalanine--tRNA ligase beta subunit [Lactobacillus helveticus H10] Length = 224 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKH 70 +D L + L +G D++ A T+V V + E++PD D + ++ G Sbjct: 77 SDDELAALNKKLAEVGF-----DDKLAYGKPTLVYGYVKTCEKHPDSDHLHVTTVEVGDG 131 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SD 128 +E Q+VCGAPN+ G V A PG+ +P I +RG++S GM+CS +EL L + Sbjct: 132 EEHQIVCGAPNIAQGQKVVVALPGTLMPNGEQIW-PGALRGVDSYGMICSARELGLPHAP 190 Query: 129 DSASIMELPIDAPVGGRL 146 IM +P + VG Sbjct: 191 QKRGIMVVPDNFEVGAEF 208 >gi|326517154|dbj|BAJ99943.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 649 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 28/167 (16%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE---------PLPLTQVEDKRNLSL 490 DK VSVP+ R D+ + D++EE+ YG +++K PLP+ ++ D Sbjct: 344 DKITVSVPASRPDILHECDIMEEVAIAYGFNKLKKTFPATNTVAVPLPVNKLSD------ 397 Query: 491 QQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRT 546 V+R + +EV+ S +++ + G+ + + NP +A+ +RT Sbjct: 398 ------IVRRECSLAGFIEVLPLILCSHDENFAWLNRKDDGKTAVVLENPKTAEYQIVRT 451 Query: 547 SLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRK 593 SLLPGLLK+ N + IFEVS V D +K A IRK Sbjct: 452 SLLPGLLKSIRENRKHTLP-MKIFEVSDVVVKDDKAERK--ARNIRK 495 >gi|62751403|ref|NP_001015711.1| phenylalanyl-tRNA synthetase, beta subunit [Xenopus (Silurana) tropicalis] gi|59808104|gb|AAH89642.1| phenylalanine tRNA synthetase like beta subunit [Xenopus (Silurana) tropicalis] gi|89269019|emb|CAJ83855.1| phenylalanine tRNA synthetase like beta subunit [Xenopus (Silurana) tropicalis] Length = 588 Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 87/394 (22%), Positives = 155/394 (39%), Gaps = 40/394 (10%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ +G + S+ II G H+ NT +V +E D + A+ ++ + S Y E Sbjct: 223 VIYDRNGVLLSMPPIINGDHSRITLNTRNVFIECTATD-LTKAKIVLDIMVTMFSEYCAE 281 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 P +I G+ S I + Y RK V ++ GI Sbjct: 282 ---------PFTVEAAEVIQP--DGSTS---IYPELAY--RKEVVPAEKMNSKIGISETP 325 Query: 422 EDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + ++L R+ V+ + ++ E+ VP R D+ + D+VE+ YG + IK + + Sbjct: 326 SNLAKLLTRMCLKSHVLEDGEQIEIEVPPTRADIIQACDIVEDAAVAYGFNNIK---MVI 382 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVLFG---GGQRELEILN 535 + N T +++ LA+ E + ++ S + S G + I N Sbjct: 383 PKTYTIANQFPLNKLTELLRQDLAAAGFTEALTFALCSVDDISDKLGIPVSATKAAHISN 442 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 P +A+ RT+LLPGLLK N + +FE+S V D + G+ Sbjct: 443 PKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKDPTKDV---------GA 492 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 ++ +K L D L++ + ++ + PGR Sbjct: 493 RNYRHLCAVYYNKYPGFEVIHGLLDRTMQLLALCP---GETGYQIKAAQDPAFFPGRCAE 549 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 I + +I+ G G HP+++ F L+ P E+ Sbjct: 550 ILVNEQII-GKLGVLHPDVVTKFDLTLPCSALEI 582 >gi|70953848|ref|XP_746000.1| phenylalanine--tRNA ligase [Plasmodium chabaudi chabaudi] gi|56526491|emb|CAH76598.1| phenylalanine--tRNA ligase, putative [Plasmodium chabaudi chabaudi] Length = 447 Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 46/207 (22%) Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 +++D P +++ S+ I S+ II G H NT ++ VE Sbjct: 209 KDFDKYP--LIVDSENNILSLPPIINGDHTKITINTKNLFVECT---------------- 250 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLC--GGTASDICIARN-------------I 397 G+DL + L I S++ C T + ++ N Sbjct: 251 ----------GIDLNKLEICLNIISSMLSEYCQPKYTIHSVLVSYNENHELEKGNKHLYP 300 Query: 398 TYKPRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVE 454 +K +K+ V++LSGI D+ IED ++L+++ V + FEV VP +R D+ Sbjct: 301 NFKNKKLTCDIEYVRKLSGITDITIEDIKKLLKKMMIPVTNVINNTTFEVDVPFYRSDIM 360 Query: 455 EKADLVEEILRIYGVDQIKSEPLPLTQ 481 D+VE+I YG IK EP+ +++ Sbjct: 361 HACDIVEDIAIAYGYGNIKHEPIEISK 387 >gi|161507891|ref|YP_001577855.1| phenylalanyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] gi|160348880|gb|ABX27554.1| Phenylalanyl-tRNA synthetase [Lactobacillus helveticus DPC 4571] Length = 215 Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 11/138 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKH 70 +D L + L +G D++ A T+V V + E++PD D + ++ G Sbjct: 68 SDDELAALNKKLAEVGF-----DDKLAYGKPTLVYGYVKTCEKHPDSDHLHVTTVEVGDG 122 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SD 128 +E Q+VCGAPN+ G V A PG+ +P I +RG++S GM+CS +EL L + Sbjct: 123 EEHQIVCGAPNIAQGQKVVVALPGTLMPNGEQIWP-GALRGVDSYGMICSARELGLPHAP 181 Query: 129 DSASIMELPIDAPVGGRL 146 IM +P + VG Sbjct: 182 QKRGIMVVPDNFEVGAEF 199 >gi|312865538|ref|ZP_07725765.1| tRNA binding domain protein [Streptococcus downei F0415] gi|311099056|gb|EFQ57273.1| tRNA binding domain protein [Streptococcus downei F0415] Length = 208 Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%) Query: 25 LTSIGLEVEKVDNREALSP-----FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCG 78 L + E+ K D E L F + ++ ++ +PD D I ++ + +Q+V G Sbjct: 72 LEVLNQELAKEDFEEKLEATPTPVFLVGQIKEMKAHPDSDHLNICQVAINPDKTVQIVAG 131 Query: 79 APNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMEL 136 APN VGL + A PG+ +P ++I K+RG+ S GMMC+ +EL L + I+EL Sbjct: 132 APNAAVGLKTIVALPGAMMPNGSLIFP-GKLRGVNSYGMMCAPRELALPNAPQKRGIIEL 190 Query: 137 PIDAPVG 143 A VG Sbjct: 191 DDTAVVG 197 >gi|123419297|ref|XP_001305523.1| phenylalanyl-tRNA synthetase, beta subunit family protein [Trichomonas vaginalis G3] gi|121887047|gb|EAX92593.1| phenylalanyl-tRNA synthetase, beta subunit family protein [Trichomonas vaginalis G3] Length = 581 Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 36/263 (13%) Query: 441 KFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKR 500 K V+VP R DV D+ E++ YG + I P + R LS+ + R K Sbjct: 326 KLRVTVPPTRSDVLHPCDIAEDVAIAYGYNAINDLPENRKAISSGRPLSMNEYVDRLSKE 385 Query: 501 VLASRAMMEVVNWSFISKEQ--SVLFGGGQRELEIL-NPISADMSNMRTSLLPGLLKATG 557 A+ +++ +S S+++ S+L + +L N + D +RTSLL GLLK Sbjct: 386 -FAAALWDQILTFSLCSRKECYSMLNLEDDGKAAVLKNAKTIDFEIVRTSLLGGLLKVNK 444 Query: 558 RNVD----RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 + + + I +FE S V D+ K + RL + + + Sbjct: 445 KILSQPNLKNILPLRLFECSDVVLCDS------------KDENNARNEKRLAATICDVKS 492 Query: 614 RFVDLFDAKADALSVIEPFVSL-------DSLRFESGAPSWYHPGRSGIIKTSAEIVLGY 666 RF DL ++E F+ L ++ P+ R+ I+ E+ G+ Sbjct: 493 RFQDLH-------GLLERFLILNGQDAIENTKLVRQDCPTCIPGQRAAIMYHGQEV--GW 543 Query: 667 FGEFHPNILDFFGLSNPICGFEV 689 G HP++L F ++ P+ FE+ Sbjct: 544 IGVIHPSVLINFDMTKPVVAFEL 566 >gi|322815476|gb|EFZ24125.1| phenylalanyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 625 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 126/315 (40%), Gaps = 56/315 (17%) Query: 410 EVKRLSGI--DVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V+RL GI D P + ++LER+ V E D V VP+ R DV DL+E++ Sbjct: 326 KVERLIGIKLDSP-QHCGQLLERMLHRVAKMEGDNIFVEVPATRPDVLGPTDLMEDVAIA 384 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQ-SRTRYVKRV-LASRAMMEVVNWSFISKEQSVLF 524 YG D IK + + ++ Q S+ ++ R+ +A+ E++ +S S++++ F Sbjct: 385 YGYDNIK-----YVECTTRGKVTQQPLSKLSHLLRIEMANAGYTELLTFSLCSRDEA--F 437 Query: 525 GGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV---- 575 RE + I NP + + R SL+PG+LK N + FE + V Sbjct: 438 AHLNREDDDVAVHIANPRTMEFQICRPSLMPGILKTLNANKSHPLP-LRFFECADVVLID 496 Query: 576 --------------YENDTPEGQKYMAA----GIRKGSSGIEGSGRLWSDKSEERCRFVD 617 Y N Q+++AA G I G K Sbjct: 497 NEKNFPPLIRPHSEYPNCGACNQRHVAALHCCSENSGFEDIHGLVEFIMKKLG------- 549 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNI 674 K D + E D+ E G + PGR I + ++ LG FG HPN Sbjct: 550 -ISRKGDQNAEAEE----DTYTLERGTDGAFFPGRCMDIFLHRKDQKVCLGGFGVVHPNT 604 Query: 675 LDFFGLSNPICGFEV 689 L + + P E+ Sbjct: 605 LRAYDIPFPCSYMEI 619 >gi|69246051|ref|ZP_00603778.1| t-RNA-binding region [Enterococcus faecium DO] gi|68195423|gb|EAN09869.1| t-RNA-binding region [Enterococcus faecium DO] Length = 201 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 +Q+VCGAPN+ G V A PG+ +P + M++ +RG++S GM+CS +EL L + A Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVDSYGMICSARELHLPNAPA 182 Query: 132 --SIMELPIDAPVG 143 I+ LP DA +G Sbjct: 183 KKGILVLPEDAVLG 196 >gi|295397240|ref|ZP_06807338.1| tRNA binding domain protein [Aerococcus viridans ATCC 11563] gi|294974521|gb|EFG50250.1| tRNA binding domain protein [Aerococcus viridans ATCC 11563] Length = 218 Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 6/135 (4%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKH 70 HL + L+ I +L G + D+ L +++V +E + L +I Sbjct: 74 HL-SQTQLDLINQSLYEQGFDTIPFDDNPRLVVAEVLEVKDLEGSDHLHITQTKIS--PD 130 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + +Q+VCGAPNVR G+ V A PG+ +P N ++ ++RG+ S GM+ S EL + + Sbjct: 131 EVVQIVCGAPNVREGMFVVAALPGAVMP-NGQVIWEGELRGVSSYGMLTSAFELGVDPEH 189 Query: 131 A--SIMELPIDAPVG 143 I+E+ D PVG Sbjct: 190 VRKGILEIKNDVPVG 204 >gi|121591561|ref|ZP_01678820.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae 2740-80] gi|121546588|gb|EAX56784.1| phenylalanyl-tRNA synthetase beta chain [Vibrio cholerae 2740-80] Length = 115 Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD+A +VD +I +G +V + L+ D +FDV+ GK + EGKKS+AI + +Q ++ Sbjct: 27 RRDIALVVDGNIASGDIVEACRVAGGELLKDAKLFDVYVGKGVEEGKKSLAIALTLQSVE 86 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLR 803 T + DI ++ IV+ V + A LR Sbjct: 87 RTLEEADIAAAVEAIVQAVSAQFGAALR 114 >gi|227550924|ref|ZP_03980973.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecium TX1330] gi|257896555|ref|ZP_05676208.1| hypothetical protein EFVG_01509 [Enterococcus faecium Com12] gi|293379334|ref|ZP_06625480.1| tRNA binding domain protein [Enterococcus faecium PC4.1] gi|227180022|gb|EEI60994.1| phenylalanine--tRNA ligase beta subunit [Enterococcus faecium TX1330] gi|257833120|gb|EEV59541.1| hypothetical protein EFVG_01509 [Enterococcus faecium Com12] gi|292642130|gb|EFF60294.1| tRNA binding domain protein [Enterococcus faecium PC4.1] Length = 201 Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK-VLSVERNPDLD-CAILRIDTGKHQ 71 TD L K+ + G E + + E P +V V + +PD D +I + Sbjct: 67 TDEELAKLNRLIKEAGFEEQLEADHE---PKIVVGYVKTCVPHPDSDHLSITETEVDNGT 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A PG+ +P + M++ +RG+ S GM+CS +EL L + + Sbjct: 124 VLQIVCGAPNIEAGQKVVVAKPGAMMP-DGMMIWPGTLRGVASYGMICSARELHLPNAPE 182 Query: 130 SASIMELPIDAPVG 143 I+ LP DA VG Sbjct: 183 KKGILVLPEDAVVG 196 >gi|256384344|gb|ACU78914.1| phenylalanine-tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|256385176|gb|ACU79745.1| phenylalanine-tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12] gi|296455717|gb|ADH21952.1| phenylalanine-tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0] Length = 202 Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats. Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K + +Q++CGA N R ++ V A S +P I Sbjct: 89 FVIGRIIECEPIEGTHLNICQVDI-KSEILQIICGASNARKKVVCVVATLNSWLPNGQQI 147 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 V KIRG++S GM+CS KEL + +D I+EL Sbjct: 148 VQ-SKIRGVDSFGMLCSYKELNIENDQQGIIEL 179 >gi|224059978|ref|XP_002194127.1| PREDICTED: phenylalanyl-tRNA synthetase, beta subunit [Taeniopygia guttata] Length = 591 Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 83/406 (20%), Positives = 150/406 (36%), Gaps = 57/406 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G+H+ NT + +E Sbjct: 225 VIYDSNGVVLSMPPIINGEHSKIRLNTRNAFIECT------------------------- 259 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGT----ASDICIARNITYKPRKIVFMNSEVK----- 412 G D+ VL IV++ C A ++ T+ ++ + +VK Sbjct: 260 -GTDITKAKIVLDTIVTMFSEYCEKPFTVEAVEVVCPNGKTHIYPELAYRTEKVKPEYIN 318 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 + GI ++L R+ V G + E+ +P R D+ D+VE+ YG + Sbjct: 319 KKVGISESPSSLAKLLTRMCLKSHVTGNGNHIEIEIPPTRADIIHACDIVEDAAIAYGYN 378 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV----LFGG 526 I+ + + + N T ++ LA+ E + ++ S+E Sbjct: 379 NIQ---MVIPKTYTIANQLPLNKFTELLRVDLAAAGFTEALTFALCSQEDIADKLRTDIS 435 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + + I NP +A+ RT+LLPGLLK N + +FE+S V D Sbjct: 436 TTKAVRIANPKTAEFQVARTTLLPGLLKTIAANRKMPLP-LKLFEISDVVVKD------- 487 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 G+ ++ +KS L D L V P + ++ + Sbjct: 488 --PNTDVGARNYRHLCAIYYNKSPGFEIIHGLLDRVMQVLEV--PPNEENGYTIKAAEGT 543 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + PGR + + + G G HP+++ F L+ P E+ ++ Sbjct: 544 AFFPGRCAEVFAKGQSI-GKLGVVHPDVITKFELTMPCSVLEINIE 588 >gi|282164081|ref|YP_003356466.1| phenylalanyl-tRNA synthetase beta chain [Methanocella paludicola SANAE] gi|282156395|dbj|BAI61483.1| phenylalanyl-tRNA synthetase beta chain [Methanocella paludicola SANAE] Length = 553 Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 34/295 (11%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIY 467 SE+ + G+D+ + +L R+G + D V +P +R D+ + D+V+++ R+Y Sbjct: 283 SEINTVLGLDLTAMQAKDLLLRMGNGIAETGSDYLVVEIPPYRTDIIQLRDIVDDVGRVY 342 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS---VLF 524 G + + P L+ + V+ V+ + +N+ I KE++ + Sbjct: 343 GFNNM---PPVYPNTPSVGQLAEKNKLNDAVREVMIGLGCQDTLNFILIGKEETYTKMCQ 399 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 R +E+ NP + + MRT + P L+ N+ R I EV D E Sbjct: 400 PEDGRAVELSNPYTDQYNIMRTWIAPSLMIVLSNNLHREYPQ-NILEVGTTAHLDNFE-- 456 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 S+G++ + + F ++ K S+ F D LR Sbjct: 457 ----------STGVKEEEHVACALCYSKAGFNEI---KTKLQSLCYNFGLADKLR----T 499 Query: 645 PSWYHPGRSGIIKTSAEIVLG-----YFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + HP S I AEI +G GE HP +L +G+ PI FE+ + S+ Sbjct: 500 AAVEHP--SFITGRCAEIFIGDKKAGIIGEIHPQVLKNWGIEMPIALFEMDVSSL 552 >gi|71408829|ref|XP_806793.1| phenylalanyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener] gi|70870643|gb|EAN84942.1| phenylalanyl-tRNA synthetase, putative [Trypanosoma cruzi] Length = 625 Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 80/315 (25%), Positives = 126/315 (40%), Gaps = 56/315 (17%) Query: 410 EVKRLSGI--DVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRI 466 +V+RL GI D P + ++LER+ V E D V VP+ R DV DL+E++ Sbjct: 326 KVERLIGIKLDSP-QHCGQLLERMLHRVAKMEGDNIFVEVPATRPDVLGPTDLMEDVAIA 384 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQ-SRTRYVKRV-LASRAMMEVVNWSFISKEQSVLF 524 YG D IK + + ++ Q S+ ++ R+ +A+ E++ +S S++++ F Sbjct: 385 YGYDNIK-----YVECTTRGKVTQQPLSKLSHLLRIEMANAGYTELLTFSLCSRDEA--F 437 Query: 525 GGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV---- 575 RE + I NP + + R SL+PG+LK N + FE + V Sbjct: 438 AHLNREDDDVAVHIANPRTMEFQICRPSLMPGILKTLHANKSHPLP-LRFFECADVVLID 496 Query: 576 --------------YENDTPEGQKYMAA----GIRKGSSGIEGSGRLWSDKSEERCRFVD 617 Y N Q+++AA G I G K Sbjct: 497 NEKNFPPLIRPHSEYPNCGACNQRHVAALHCCSENSGFEDIHGLVEFIMKKLG------- 549 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFHPNI 674 K D + E D+ E G + PGR I + ++ LG FG HPN Sbjct: 550 -ISRKGDQNAEAEE----DTYTLERGTDGAFFPGRCMDIFLHRKDQKVCLGGFGVVHPNT 604 Query: 675 LDFFGLSNPICGFEV 689 L + + P E+ Sbjct: 605 LRAYDIPFPCSYMEI 619 >gi|330837237|ref|YP_004411878.1| phenylalanyl-tRNA synthetase beta subunit [Spirochaeta coccoides DSM 17374] gi|329749140|gb|AEC02496.1| phenylalanyl-tRNA synthetase beta subunit [Spirochaeta coccoides DSM 17374] Length = 566 Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 76/324 (23%), Positives = 130/324 (40%), Gaps = 34/324 (10%) Query: 380 ILSLCGGTASDICIARNIT---YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI 436 IL + D R IT Y + V + G + E S++ L+ +G + Sbjct: 267 ILPVTAVYPYDTPFGREITVPYYFQEPVACPLETVHAILGQKLTGEQSVQALKNMGVFSV 326 Query: 437 GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRT 495 E D V+VP +R D D+ E+++ G++ E P T +S + Sbjct: 327 FEKDCLYVTVPEYRNDFLHPVDVAEDVMIGRGLENFAPEMPDDFTV----GRISPAEVLG 382 Query: 496 RYVKRVLASRAMMEVVNWSFISKEQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLL 553 R V+ ++ E++ S+ + + + G+ + I NP+S + +R S+LP LL Sbjct: 383 RKVQELMVGMGFQEMIYNYLGSRREYIDNMHVCGKDAIFIANPMSENYEVVRPSILPSLL 442 Query: 554 KATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERC 613 ++ + A+ IFEV V + E +SG+ L ++ Sbjct: 443 ESESVS-GHAVYPHRIFEVGKVAYKEPSE------------NSGVVTRNHLGFLSADNDA 489 Query: 614 RFVDLFDAKADALSVIEP---FVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEF 670 F DAL+ ++ F+ D E S + GR + V G FGE Sbjct: 490 GF-------NDALAYVKTLMYFLGKDYALAELAEDSRFLAGRCARVMVEGREV-GVFGEI 541 Query: 671 HPNILDFFGLSNPICGFEVYLDSI 694 HP +L+ +G + P G E LD + Sbjct: 542 HPAVLESWGTTMPTIGAEFDLDRL 565 >gi|116495194|ref|YP_806928.1| EMAP domain-containing protein [Lactobacillus casei ATCC 334] gi|227534788|ref|ZP_03964837.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239632076|ref|ZP_04675107.1| EMAP domain containing protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|301066758|ref|YP_003788781.1| EMAP domain [Lactobacillus casei str. Zhang] gi|116105344|gb|ABJ70486.1| EMAP domain [Lactobacillus casei ATCC 334] gi|227187544|gb|EEI67611.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|239526541|gb|EEQ65542.1| EMAP domain containing protein [Lactobacillus paracasei subsp. paracasei 8700:2] gi|300439165|gb|ADK18931.1| EMAP domain [Lactobacillus casei str. Zhang] Length = 213 Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 5/103 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V A PG+ +P+ Sbjct: 96 FVIGKIVDFKDHPDADHLHVTQVDIGNEQ-VQIVCGAPNAALGQTVVVALPGAMMPDGK- 153 Query: 103 IVNVRKIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVG 143 I+ +RG++S GM+ S +EL + + I+ +P P G Sbjct: 154 IIWPGSLRGVDSYGMISSARELGIPGAPQRRGILVMPDSLPAG 196 >gi|119953302|ref|YP_945511.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia turicatae 91E135] gi|254781808|sp|A1QZU9|SYFB_BORT9 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|119862073|gb|AAX17841.1| phenylalanyl-tRNA synthetase beta chain [Borrelia turicatae 91E135] Length = 564 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 75/296 (25%), Positives = 122/296 (41%), Gaps = 43/296 (14%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 V ++ G + + L++LG S E DKF V P +R D + D++EEI+ G+ Sbjct: 298 VNKMLGSNFTANNMCLDLKKLGISAYFKELDKFYVIPPVYRNDFLHEVDVIEEIMIGMGL 357 Query: 470 DQIKSEPLP-------LTQVEDK----RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 D K E LP L+Q+E+ +NL + + L SR FI K Sbjct: 358 DSFKPE-LPKDFTLGRLSQIEEFSRKIKNLMIGMGFQEMIYNYLGSRT-------DFIEK 409 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 G L + NP++ +R S++ LLK+ + + IFE+ V Sbjct: 410 MNI----EGDDFLSVANPMTEGYEYIRGSIVSDLLKSESISSNFPYPH-KIFEIGKVALK 464 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 D G+ + L +DK F+ +S + +++++ Sbjct: 465 DLNS---------VDGTITYDNLAFLMADKEFS-------FNEINSLVSSLFYYLNIE-F 507 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + S Y GR G+ + VLG FGE P IL FG+ P C E+ L+ + Sbjct: 508 KLRESSKSLYIDGR-GVDILINDTVLGGFGEVSPYILRNFGIMVPCCVLEINLNKL 562 >gi|56964534|ref|YP_176265.1| phenylalanyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] gi|56910777|dbj|BAD65304.1| phenylalanyl-tRNA synthetase beta chain [Bacillus clausii KSM-K16] Length = 201 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 10/129 (7%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVV 76 L++ CD + LE+E E F + V E++P+ D ++ R++ G + +Q+V Sbjct: 75 LKEACDK-NGVALEME----WEQRPSFVVGYVEEKEKHPNADKLSVCRVNIGT-ETLQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA--SIM 134 CGAPNV G V A G+ +P + +++ +RG+ S+GM+CS KEL L + A I+ Sbjct: 129 CGAPNVAEGQKVVVALVGAVMP-SGLVIKEATLRGVASSGMICSAKELGLENAPAEKGIL 187 Query: 135 ELPIDAPVG 143 L D VG Sbjct: 188 VLSDDEVVG 196 >gi|320584082|gb|EFW98294.1| Phenylalanyl-tRNA synthetase beta chain [Pichia angusta DL-1] Length = 589 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 93/408 (22%), Positives = 163/408 (39%), Gaps = 70/408 (17%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S+ + S+ II H+ NT +V +E+ D A N + SRY E Sbjct: 208 VILDSNRTVCSLPPIINSDHSKVSLNTKNVFIEITATDRTK-AEIVVNQLVAMFSRY-CE 265 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDV 419 + ++ + + H S IC N T + K + ++NS + G+ + Sbjct: 266 QPFSVEPVEIISAH----------NHESRIC--PNFTQRTLKCEVPYINSCL----GLQL 309 Query: 420 PIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--- 473 + ++L ++ + D +V +P R D+ + D++E+ YG + +K Sbjct: 310 SPAEVCKLLSKMSVQAAPSQSDKDIIDVKIPITRPDILHQCDVMEDCAIAYGYNNLKKTT 369 Query: 474 -------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 ++PLP+ +V D ++ QS +EV+ + S +++ F Sbjct: 370 PKTAATVAQPLPINKVADILRVASAQS------------GWLEVMPLTLCSHDENFKFLN 417 Query: 527 G---QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE- 582 R +++ NP + + +RTSL+PG+LK N D ++ +FE + D E Sbjct: 418 NLDDSRAVKLANPKTVEYQVVRTSLVPGILKTIKENKDHSLP-IRVFECGDIVLKDDSER 476 Query: 583 ---GQKYMAAGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDS 637 Q+ A +SG E G L R ++ DAK IE DS Sbjct: 477 GASNQRNWCAAYAGKASGFELIQGLLGKIMQTFRTPWLSAADAKTGKKGYWIE---QDDS 533 Query: 638 LRFESGAPSWYHPGRSGIIKTSAEIV-----LGYFGEFHPNILDFFGL 680 ++ Y GR I A+ +G G HP +L F L Sbjct: 534 VKM-------YFAGRGARIMYRAKAEAPAHNIGTIGVLHPEVLTRFEL 574 >gi|15897062|ref|NP_341667.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus solfataricus P2] gi|284173407|ref|ZP_06387376.1| phenylalanyl-tRNA synthetase subunit beta [Sulfolobus solfataricus 98/2] gi|12644570|sp|P95960|SYFB_SULSO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1707793|emb|CAA69550.1| phenylalanyl-tRNA synthetase alpha chain [Sulfolobus solfataricus P2] gi|13813231|gb|AAK40457.1| Phenylalanyl-tRNA synthetase beta subunit (pheT) [Sulfolobus solfataricus P2] gi|261601717|gb|ACX91320.1| phenylalanyl-tRNA synthetase, beta subunit [Sulfolobus solfataricus 98/2] Length = 544 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 93/414 (22%), Positives = 162/414 (39%), Gaps = 75/414 (18%) Query: 303 VIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFER 362 ++ DG + SI II D++T D+ ++V Sbjct: 191 IVQEDGEVLSIPPIINSDKTKLDESTKDLFIDVT-------------------------- 224 Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDI-CIARNITYKP------RKIVFMNSE-VKRL 414 G + + L IVS L+ GGT + I + +++ KI + E ++ Sbjct: 225 GTSFEAVAQTLDIIVSN-LAEAGGTIGRVKVIKTDNSFQQSSPLLIHKIQNVREEYANKI 283 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 GI + E+ + + R+ + E V+VP +R D+ + D+VE+I G + ++ Sbjct: 284 LGIKISEEEICKHITRMRMNCNVENGIIRVTVPQYRVDIINEIDIVEDIAMSIGYNNLEP 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEIL 534 T L+L + + R + +EV N+ I E+ + + ++IL Sbjct: 344 SKYISTNYGSYDYLTLLERKMR---ELSIGAGFVEVFNFVLIKNEKIL----DSKYVKIL 396 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV--YENDTPEGQKYMAAGIR 592 NPIS + + +R SL+P LL +N A IFE V Y++ T G Sbjct: 397 NPISEEYNAVRNSLIPILLDFLSKN-QHAKFPIRIFETGDVVIYDSSTDTGF-------- 447 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSL----RFESGAPSW 647 ++++R + + D K V P L +L ++ Sbjct: 448 ---------------RNDKRAAYA-IMDNKVSYEDVQAPIHYILKTLGIEVNYKEENNDI 491 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKR 701 + GRS I E + G GE +P++L FG+ P E+Y+ I KR Sbjct: 492 FIEGRSASIVYENEKI-GVIGEINPDVLIRFGIEYPTVIAELYITEIAKKLNKR 544 >gi|13541436|ref|NP_111124.1| phenylalanyl-tRNA synthetase subunit beta [Thermoplasma volcanium GSS1] gi|24418718|sp|Q97B53|SYFB_THEVO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|14324820|dbj|BAB59747.1| tRNA synthetase Pheb [Thermoplasma volcanium GSS1] Length = 537 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 31/279 (11%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V R G V E+ + L ++G+ Y + V VP +R DV D++E+ ++ YG++ Sbjct: 280 VSRYLGDKVSEENVILNLRKMGYVAEPGYPEVMVYVPGFRVDVMGLVDIIEDFIKSYGIE 339 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 ++ + + + + + + R V+ EV+ + K F G E Sbjct: 340 NVREQYVSPGTIGSPNIFNEIKEKIR---DVVVGLGFQEVMTFVLTGKYYQEDFQG---E 393 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 + I NP S D S +R L LL RN + IFE+ V + E ++ Sbjct: 394 VRIENPKSEDYSVIRDRLYLNLLDLLARNKKHPLPQ-RIFEIGDVIVHGKQE--THLCVM 450 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + SG+ S + + F+ F +S + + ++ Sbjct: 451 VEDNRSGVSTSKSILTS-------FLKRFSDHESKISGKKIYGCIE-------------- 489 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 GRSG I S + +G GE HP+ L+ FGL NPI FE+ Sbjct: 490 GRSGEIFLSGK-SIGVIGEVHPSTLENFGLVNPISFFEI 527 >gi|331703665|ref|YP_004400352.1| Phenylalanine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] gi|328802220|emb|CBW54374.1| Phenylalanine tRNA ligase [Mycoplasma mycoides subsp. capri LC str. 95010] Length = 210 Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K + +Q++CGA N R ++ V A S +P I Sbjct: 97 FVIGRIIECEPIEGTHLNICQVDI-KSEVLQIICGASNARKKVVCVVATLNSWLPNGQQI 155 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 + KIRG++S GM+CS KEL + +D I+EL Sbjct: 156 IQ-SKIRGVDSFGMLCSYKELNIENDQQGIIEL 187 >gi|154335980|ref|XP_001564226.1| phenylalanyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] gi|134061260|emb|CAM38284.1| putative phenylalanyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904] Length = 633 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 80/320 (25%), Positives = 126/320 (39%), Gaps = 57/320 (17%) Query: 407 MNSEVKRLSGIDVPIE-----DSLRILERLGFSVIGEYDKFEVSV--PSWRQDVEEKADL 459 M V RL+ I + IE + +L ++ ++ I E + EV+V P R DV AD+ Sbjct: 325 MTMNVARLNSI-IGIEMKNGAECAELLRKMMYT-IKEATEHEVTVTVPPMRTDVIGVADV 382 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL----ASRAMMEVVNWSF 515 +E++ YG D I + VE K + Q+ V ++L A E++ S Sbjct: 383 MEDVAIAYGYDNI-------SYVECKTRGLVTQTPVSKVAQLLRTEMACAGYTELLTLSL 435 Query: 516 ISKEQSVLFGGGQR-----ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI------ 564 S + F R I NP + + R SLLPG+LK N +A+ Sbjct: 436 CSHADA--FENLNRVDNDVAAHIANPQTTEFQVCRPSLLPGILKTLATNKSKALPQRFFE 493 Query: 565 -ADFA----------IFEVSHVYENDTPEGQKYMAA-GIRKGSSGIEGSGRLWSDKSEER 612 AD + EV YE+ Q ++AA SSG E L Sbjct: 494 CADVVLLENERNFPPVLEVETDYESCGARNQSHLAAVHCNSSSSGFESIHGLAE------ 547 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGE 669 + L + + + + D E G + PGR+ I + + + +G+ G Sbjct: 548 ---LALLKLGVPSKAEVAEDYNGDYYTLEKGEDGAFFPGRAMDIILHRANQTVRIGHLGV 604 Query: 670 FHPNILDFFGLSNPICGFEV 689 HPN L + + NP E+ Sbjct: 605 IHPNTLKAYDIPNPCSYMEI 624 >gi|242374032|ref|ZP_04819606.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis M23864:W1] gi|242348283|gb|EES39885.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis M23864:W1] Length = 198 Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats. Identities = 42/112 (37%), Positives = 65/112 (58%), Gaps = 6/112 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKEKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSD 148 + M++ ++RG+ S+GM+CS KEL L + IM L D +G D Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPNAPQEKGIMVLSDDYEIGQAFFD 198 >gi|195108493|ref|XP_001998827.1| GI23417 [Drosophila mojavensis] gi|193915421|gb|EDW14288.1| GI23417 [Drosophila mojavensis] Length = 593 Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 102/262 (38%), Gaps = 27/262 (10%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D V +P R DV D+ E+I +G + IK Q+ + L+ T ++ Sbjct: 347 DSLNVKIPPTRHDVIHACDVYEDIAIAFGYNNIKKSLPAFMQIAKQFPLN---KLTEQLR 403 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKA 555 +A E + ++ S++ L + E + I NP + + +RT+LLPGLLK Sbjct: 404 EQVAQAGFTEALTFTLCSRDDIALKLNKKIEALPAVHIGNPKTLEFQVVRTTLLPGLLKT 463 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 N + +FE+S V D G RL + + F Sbjct: 464 LVANRKMPLP-MKLFEISDVVLAD------------EAAEVGARNERRLCAVNCNKSAGF 510 Query: 616 V---DLFDAKADALSVIEPFVSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVLGYFGEF 670 L D LSV D + PS++ PGR + + + V+G G Sbjct: 511 EVVHGLLDRVMQVLSVPWKTGGADKGYYLQATEDPSYF-PGRCANVMYN-DAVIGRIGVL 568 Query: 671 HPNILDFFGLSNPICGFEVYLD 692 HP++L F L+ P E ++ Sbjct: 569 HPSVLQAFDLTTPCSAVEFTIE 590 >gi|185178739|ref|ZP_02964552.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188024312|ref|ZP_02996997.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188518524|ref|ZP_03003994.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|188524073|ref|ZP_03004163.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195867753|ref|ZP_03079754.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198273556|ref|ZP_03206092.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209554324|ref|YP_002284587.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225550419|ref|ZP_03771368.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] gi|225551056|ref|ZP_03772002.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|184209346|gb|EDU06389.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 5 str. ATCC 27817] gi|188018986|gb|EDU57026.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 7 str. ATCC 27819] gi|188997884|gb|EDU66981.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 11 str. ATCC 33695] gi|195660026|gb|EDX53406.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 12 str. ATCC 33696] gi|195660608|gb|EDX53864.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] gi|198250076|gb|EDY74856.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 4 str. ATCC 27816] gi|209541825|gb|ACI60054.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 10 str. ATCC 33699] gi|225378871|gb|EEH01236.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 8 str. ATCC 27618] gi|225379573|gb|EEH01935.1| putative tRNA binding domain protein [Ureaplasma urealyticum serovar 2 str. ATCC 27814] Length = 198 Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F + +L P+ + +D G +Q++Q+VCGA N RVGL V A P +P N I Sbjct: 89 FIVGVILEANLIPNTHLHVCLVDIG-NQQVQIVCGAQNARVGLKTVVATPNLLMPNGNEI 147 Query: 104 VNVRKIRGIESTGMMCSEKELMLSD-DSASIMELPIDAPVG 143 K+ +S GM+CS+KEL + +S I+EL VG Sbjct: 148 -KKSKLMNYDSFGMLCSQKELNIEGFNSQGIVELNEQYQVG 187 >gi|256088450|ref|XP_002580348.1| phenylalanyl-tRNA synthetase subunit beta [Schistosoma mansoni] gi|238665909|emb|CAZ36587.1| phenylalanyl-tRNA synthetase beta chain, putative [Schistosoma mansoni] Length = 620 Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 95/435 (21%), Positives = 160/435 (36%), Gaps = 82/435 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 ++ S + S+ II G+H+ T +V +E Sbjct: 221 IIFDSSNTVLSMPPIINGEHSRISTKTRNVFIEAT------------------------- 255 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG--TASDI---------CIARNITYKPRKIVFMNSE 410 G DL I VL ++++ CG TA + C+ ++ Y R V Sbjct: 256 -GTDLHKAIVVLDTLITMFSEYCGEPFTAESVEVIQHDGSRCLYPSLDY--RDEVVSIDY 312 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDK-------------------FEVSVPSWRQ 451 + R G + + +L R+GF+ VS+P R Sbjct: 313 INRQLGTSFSETEVINLLNRMGFTCTSVSSNQCKDSTSDILTGGQNATGLISVSIPPTRH 372 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQ-VEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ D+ E++ +G D I E LP T V + +S T V+ +A E Sbjct: 373 DILHACDIAEDVGIAFGYDNIP-ESLPQTYCVAGNQPIS---RLTDLVRAEIAQMGFTEA 428 Query: 511 VNWSFISKEQSVLFGGGQRE-------LEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 +++S S+E R+ + I NP + D +RTSLLPGLL N Sbjct: 429 LSFSLCSRED---ISTKLRQKLDDIPAVHISNPKTLDFQVVRTSLLPGLLNTLASNRSLP 485 Query: 564 IADFAIFEVSH-VYENDTPE----GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 + +FEV V +N + + + + A +SG E L D+ + + + Sbjct: 486 LP-LKLFEVQDIVLKNPSKDVGASNHRRICAVYYNKNSGFEIIHGLL-DRLMQLLQVESI 543 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHPNILDF 677 + E +L S R + + Y GR II ++G G HP+++ Sbjct: 544 LSKTTKKSNDHERNSNL-SYRLNATSDPTYFDGRCADIILEPGSKIIGRLGILHPDVIRN 602 Query: 678 FGLSNPICGFEVYLD 692 F L+ P ++ L+ Sbjct: 603 FELTMPCSALDLDLE 617 >gi|227510541|ref|ZP_03940590.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190193|gb|EEI70260.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 213 Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 65/114 (57%), Gaps = 4/114 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE-RNPDLDCAILRIDTGKHQE 72 T+ ++++ LT+ G + + EA VK ++ R+ L +D G QE Sbjct: 70 TEGQVQRLNQFLTAHGFPGDLKADEEARFVVGYVKTMTDHPRSDHLKITTTEVDNG--QE 127 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +Q+V G+PN++VG+ V A G+ +P N +I+ ++RG+ES GM+CS +EL + Sbjct: 128 VQIVSGSPNMQVGIKVVVAKIGAMMP-NGLIIWPGELRGVESDGMICSGRELHI 180 >gi|238855139|ref|ZP_04645461.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260665516|ref|ZP_05866362.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus jensenii SJ-7A-US] gi|282932552|ref|ZP_06337974.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 208-1] gi|238832220|gb|EEQ24535.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 269-3] gi|260560637|gb|EEX26615.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus jensenii SJ-7A-US] gi|281303300|gb|EFA95480.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 208-1] Length = 215 Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G ++++VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEAHPDSDHLHVTTVDVGSESDVKIVCGAPNIEAGQKVVVALPGTLMP-NGAQIWPG 158 Query: 108 KIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVGGRL 146 ++RG+ S GM+CS +EL L + IM +P VG + Sbjct: 159 ELRGVPSYGMICSARELGLPHAPQKRGIMVVPDSFEVGQKF 199 >gi|138896359|ref|YP_001126812.1| tRNA-binding domain-containing protein [Geobacillus thermodenitrificans NG80-2] gi|196249985|ref|ZP_03148680.1| t-RNA-binding domain protein [Geobacillus sp. G11MC16] gi|134267872|gb|ABO68067.1| tRNA binding domain protein, putative [Geobacillus thermodenitrificans NG80-2] gi|196210499|gb|EDY05263.1| t-RNA-binding domain protein [Geobacillus sp. G11MC16] Length = 201 Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V E++P+ D +I ++D G ++ +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKEKHPNADKLSICQVDVG-NEVLQIVCGAPNVAAGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ ++RG+ S GM+CS +EL L + Sbjct: 151 -SGLVIQESELRGVTSRGMICSARELGLPN 179 >gi|154150201|ref|YP_001403819.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Methanoregula boonei 6A8] gi|166227805|sp|A7I615|SYFB_METB6 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|153998753|gb|ABS55176.1| phenylalanyl-tRNA synthetase, beta subunit [Methanoregula boonei 6A8] Length = 542 Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 55/301 (18%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 E L G+D+ +LE++ F D+ V VP +R D+ DL E++ YG Sbjct: 277 ECSALIGVDLTAPQMAELLEKMRFGAEPAGPDQVRVQVPCYRADIMHDWDLFEDVAIAYG 336 Query: 469 VDQIKSEPLPLTQV--EDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG 526 + E P + E N Q+R +LA +E++ ++ + + VL Sbjct: 337 YENFAVEVPPTFSIGKEHPANRIAGQARA-----ILAGLGYLEMMPFTLTN--ERVLCDR 389 Query: 527 GQR-----ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 QR L +++PIS + + +RT ++P LL+ N R + Sbjct: 390 MQRPGEPATLRLMHPISEEYTVVRTDIVPLLLEMLQVNRHRELP---------------- 433 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSD-KSEERCRFV------DLFDAKADALSVIEPFVS 634 Q+ A +G + +D + +R FV D +A A A +V+ Sbjct: 434 --QRLFA------------TGDVIADLLTTQRLAFVSTHAGADFSEAYAHADAVLRELGV 479 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 S A ++ R+ II + G FGE HP +L F L P+ FE+ L ++ Sbjct: 480 AYSAEVSDDA-AFIEGRRADIIVGGKKA--GVFGEIHPAVLTAFELEQPVAAFELDLRAV 536 Query: 695 P 695 P Sbjct: 537 P 537 >gi|313836590|gb|EFS74304.1| tRNA binding domain protein [Propionibacterium acnes HL037PA2] Length = 191 Score = 57.8 bits (138), Expect = 8e-06, Method: Composition-based stats. Identities = 52/190 (27%), Positives = 81/190 (42%), Gaps = 27/190 (14%) Query: 1 MKFTLSWLKD--HLDTDVSLEKICDTLTSIGLEVEKVD--NREALSPFTIVKVLSVERNP 56 MK +SWL+ +L + + + LT+ VEKV+ E P I +LS P Sbjct: 1 MKVPMSWLQALVNLPDGTTTDDVVQALTNHTATVEKVEVVGGELTGPLVIGHILSSVPEP 60 Query: 57 DLDCAIL---RIDTGKHQEIQ--------------VVCGAPNVRVGLLGVWAPPGSCIPE 99 + I+ R+D G + +VCGAPN G V + PG+ +P Sbjct: 61 QKNGKIINWCRVDVGPRYNAEGHPNNVEEGIEGRGIVCGAPNAVEGAWVVVSLPGAVLP- 119 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAP-----VGGRLSDYLELSD 154 ++ RK G S GM+C+ EL + D I+ LP G L + + Sbjct: 120 GGFAISARKTYGHMSDGMLCASDELGIGVDHTGIITLPSSVEGHQLVPGENALPILGVPE 179 Query: 155 PIIDVSLTPN 164 ++DV +TP+ Sbjct: 180 EVLDVDVTPD 189 >gi|149183939|ref|ZP_01862323.1| YtpR [Bacillus sp. SG-1] gi|148848351|gb|EDL62617.1| YtpR [Bacillus sp. SG-1] Length = 201 Score = 57.4 bits (137), Expect = 9e-06, Method: Composition-based stats. Identities = 52/150 (34%), Positives = 79/150 (52%), Gaps = 12/150 (8%) Query: 6 SWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREAL----SP-FTIVKVLSVERNPDLD- 59 S++K +D LE D L I ++K E L SP F + V E++P+ D Sbjct: 55 SYMK--IDAQGQLEMNQDKLKEINEAIQKNGFDEELQADFSPKFVVGYVQEKEKHPNADK 112 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 + ++D G + +Q+VCGAPN+ G V A G+ +P + M++ ++RG+ S+GM+C Sbjct: 113 LTVCKVDVGS-ETLQIVCGAPNIDSGQKVVVAKVGAVMP-SGMLIKDAELRGVASSGMIC 170 Query: 120 SEKELMLSD--DSASIMELPIDAPVGGRLS 147 S KEL L D I+ L DA VG S Sbjct: 171 SAKELDLPDAPKEKGILILGEDAKVGEAFS 200 >gi|299747827|ref|XP_001837276.2| phenylalanyl-tRNA synthetase subunit beta [Coprinopsis cinerea okayama7#130] gi|298407696|gb|EAU84893.2| phenylalanyl-tRNA synthetase subunit beta [Coprinopsis cinerea okayama7#130] Length = 629 Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 130/613 (21%), Positives = 234/613 (38%), Gaps = 112/613 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + + GI+ L V G + + + P ES L D + + Sbjct: 56 PQLKIEIPANRYDLLCIEGISRALNVFLGRAEAPKYRLVYPKGGESELLTTTIDPATAQI 115 Query: 214 CKGFAMCCVKGVR-------------NNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 FA ++ V+ + + N R+R A+G + L Sbjct: 116 RPLFACAVLRNVKFTPRSYASFMDLQDKLHQNICRRRQFVAIGTHDLDTLT--------- 166 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIA- 305 P ++A D+ L + + E+++ L E L SP +I Sbjct: 167 ---PPFRYEARPPKDIKFAPLGKTQEYTAEELMTLYESEKHLARYLHIIRDSPVYPIIYD 223 Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 S + S+ II +H+ NT +V ++V D + N+ S Y E Sbjct: 224 SKDTVLSMPPIINSEHSKITLNTRNVFIDVTATDQTKL-DIVVNMVATMFSEY-CEEPFT 281 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL 425 ++ + VL + + I G R +V S V +G+++ ++ Sbjct: 282 IEPVKVVLPNGQTKITPDLSG---------------RDMVAHASYVNSCTGLNLSTKEVA 326 Query: 426 RILERLGF--SVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK--------- 473 ++L ++ S+ E D V +P+ R D+ + D++E+ YG + + Sbjct: 327 KLLTQMSLETSLSSENADVINVHIPATRPDILHECDIMEDAAIAYGFNNLPDKFPATSTV 386 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQR 529 ++PL ++++ D ++ A +EV+ S E++ + G Sbjct: 387 AQPLAISKLSD------------VIRLEWALAGWIEVLPLILCSHEENFEWLNHKDDGNT 434 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQ 584 ++I NP + + +RT+L+PGLLK N A+ +FE S V DT + Sbjct: 435 AVKIANPKTLEFQVVRTTLIPGLLKTIRENKTHALP-IKVFETSDVVFKDTTRERQARNE 493 Query: 585 KYMAAGIRKGSSGIE-GSGRL-WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ AA ++G E G L + K E R D K + E + D + F Sbjct: 494 RHAAAVWCNKTAGFEIVHGMLDRAMKMLEIPRIGSQEDDKPTGYYIKE---TSDEMYFPG 550 Query: 643 GAPSWY------HPGR-SGIIKTSAE--------IVLGYFGEFHPNILDFFGLSNPICGF 687 A + Y HP R + IK E I +G G HP++L+ F ++ P Sbjct: 551 RAATIYYRPPPNHPQRLASQIKDKVESALGAKHDIAIGSLGILHPSVLEKFEINFPCSAL 610 Query: 688 EVYLDSIPISQKK 700 E L+ +K Sbjct: 611 EFSLEPFKKQMQK 623 >gi|320547837|ref|ZP_08042121.1| tRNA binding domain protein [Streptococcus equinus ATCC 9812] gi|320447597|gb|EFW88356.1| tRNA binding domain protein [Streptococcus equinus ATCC 9812] Length = 208 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/133 (33%), Positives = 70/133 (52%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + K+ LT G E+++N + F + ++ + +PD D I ++ + Sbjct: 68 TDEDVAKLNAELTKEGFS-EQLENDPS-PKFVVGQIKEMVAHPDSDHLNICQVQISDDKT 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN VGL + A PG+ +P ++I +RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAAVGLKTIVALPGAMMPNGSLIFP-GALRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL A VG Sbjct: 185 RGIIELDDTAVVG 197 >gi|159041186|ref|YP_001540438.1| phenylalanyl-tRNA synthetase subunit beta [Caldivirga maquilingensis IC-167] gi|157920021|gb|ABW01448.1| phenylalanyl-tRNA synthetase, beta subunit [Caldivirga maquilingensis IC-167] Length = 547 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 84/347 (24%), Positives = 151/347 (43%), Gaps = 39/347 (11%) Query: 236 QRLKAVGLRSISALVDITNYVSLDRGY--PSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +RL ++GL + + +YV++ P ++ ++DVL + L + Sbjct: 130 RRLVSIGLYDLDTVKPPFSYVAVKEATYRPLGYSESMTLTDVLKLTEKGRAYSSL-VKPG 188 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGII 353 EY L +I S+GR+ S I+ G+ ++T +VL++V +P L I+ Sbjct: 189 EYPL-----LIDSEGRVLSFPPILNGEETKITESTRNVLIDVTGIEP---GLMKHVLNIM 240 Query: 354 TDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKR 413 S R P+++ I G +S+I + K K+ +V+ Sbjct: 241 VTSVAERSRN-------PIIESIE------VTGNSSEITPS----LKWIKVNVKLRDVED 283 Query: 414 LSGIDVPIEDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 L GI + + +L R+G S++G D +V P +R DV D++E++ G + Sbjct: 284 LLGIRLEANTVINVLTRMGLKASIMG--DSIDVLAPPYRIDVHSYVDVIEDVAIGLGYNN 341 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE- 530 ++ P T K + + + ++ +L + EVVN++ S E V+ G Sbjct: 342 LEPNLPPSTHFGIKHPV---EYLSGVIRDLLLGMGLQEVVNFNLTSDE--VMRNIGLVNF 396 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 +++ NP D S +R+SL+P LL N R + FEV V E Sbjct: 397 IKLSNPKIRDYSALRSSLIPSLLLTVKIN-QRLVGKLEAFEVGDVIE 442 >gi|325126160|gb|ADY85490.1| Phenylalanyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 215 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GSLRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|314933894|ref|ZP_07841259.1| tRNA-binding domain protein [Staphylococcus caprae C87] gi|313654044|gb|EFS17801.1| tRNA-binding domain protein [Staphylococcus caprae C87] Length = 198 Score = 57.4 bits (137), Expect = 1e-05, Method: Composition-based stats. Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L+++ G ++ +Q+VCGAPNV V A G+ +P Sbjct: 89 LSPKFVVGYVETKEKHPDADKLSVLKVNVG-NETLQIVCGAPNVAAEQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + MI+ K+RG++S+GM+CS KEL L + IM L D +G Sbjct: 148 -SGMIIKDAKLRGVDSSGMICSMKELDLPNAPQEKGIMVLNDDYEIG 193 >gi|313124203|ref|YP_004034462.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312280766|gb|ADQ61485.1| Phenylalanine--tRNA ligase beta subunit [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 215 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GALRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|104774361|ref|YP_619341.1| hypothetical protein Ldb1523 [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|103423442|emb|CAI98323.1| Conserved hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] Length = 215 Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GALRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|315282548|ref|ZP_07870934.1| tRNA-binding domain-containing protein [Listeria marthii FSL S4-120] gi|313613796|gb|EFR87554.1| tRNA-binding domain-containing protein [Listeria marthii FSL S4-120] Length = 205 Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats. Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 7/105 (6%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V S E++P+ D + +I+ G+ + +Q+VCGAPN+ VG Sbjct: 85 GFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCQINVGE-EVLQIVCGAPNIEVGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 V A G+ +P + +I+ +RG +S GM+C+ +EL + D A Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPA 184 >gi|325685762|gb|EGD27836.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 215 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GTLRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|256852150|ref|ZP_05557536.1| phenylalanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260661817|ref|ZP_05862728.1| phenylalanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|282933678|ref|ZP_06339037.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297205685|ref|ZP_06923081.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] gi|256615196|gb|EEU20387.1| phenylalanyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN] gi|260547564|gb|EEX23543.1| phenylalanyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN] gi|281302211|gb|EFA94454.1| phenylalanine--tRNA ligase [Lactobacillus jensenii 208-1] gi|297150263|gb|EFH30560.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus jensenii JV-V16] Length = 215 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 4/101 (3%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + +D G ++++VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEAHPDSDHLHVTTVDVGLDDDVKIVCGAPNIEAGQKVVVALPGTLMP-NGAQIWPG 158 Query: 108 KIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRL 146 ++RG+ S GM+CS +EL L+ IM +P + VG + Sbjct: 159 ELRGVPSYGMICSARELGLAHAPQKRGIMVVPDNFEVGQKF 199 >gi|70726181|ref|YP_253095.1| hypothetical protein SH1180 [Staphylococcus haemolyticus JCSC1435] gi|68446905|dbj|BAE04489.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 198 Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 6/112 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L+++ G ++ +Q+VC APNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKEKHPDADKLSVLKVNVG-NEHLQIVCDAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSD 148 + M++ ++RG+ S+GM+CS KEL L + IM L D +G D Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPNAPQEKGIMVLSNDYEIGQAFFD 198 >gi|300811430|ref|ZP_07091925.1| tRNA binding domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497588|gb|EFK32615.1| tRNA binding domain protein [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 215 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GALRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|326498731|dbj|BAK02351.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 577 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 72/297 (24%), Positives = 124/297 (41%), Gaps = 47/297 (15%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V + GI V +L ++G + + V++P R DV D+VE++ YG Sbjct: 305 DVNKKIGIRVDDATMADLLSKMGLQARVVAAKRISVTIPPTRSDVLHACDIVEDVAIAYG 364 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFISKEQSVLFGGG 527 + IK + +P T + ++ + R+ LA E + ++ S+E G Sbjct: 365 FNNIK-KTIPKTNCFSS---EFELNKLSDLLRLELAQIGYTEALTFTLCSREDVAEKLGK 420 Query: 528 QRE----LEILNPISADMSNMRTSLLPGLLK--ATGRNVDRAIADFAIFEVSHVYENDTP 581 + E + I NP + D +RT+LLPGLLK A+ RN+ + IFEVS V D Sbjct: 421 KIENLPVVHISNPKTLDFQVVRTTLLPGLLKTIASSRNMPLPL---KIFEVSDVVLKD-- 475 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD---ALSVIEPFVSLDSL 638 + E R ER V ++ +A V++ + L + Sbjct: 476 --------------ADAEVGAR------NERHLTVVFYNKQAGFEIVHGVLDRLMQLVEV 515 Query: 639 RFESGAP------SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 ++SG + PGR + + + G G HP+++ + L+ P C E+ Sbjct: 516 PWKSGYELKHIDDPTFMPGRCAAVNVHGKRI-GTVGVLHPDVIKAYELNYPCCALEI 571 >gi|170291216|ref|YP_001738032.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Korarchaeum cryptofilum OPF8] gi|229470688|sp|B1L7C0|SYFB_KORCO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|170175296|gb|ACB08349.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Korarchaeum cryptofilum OPF8] Length = 556 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 87/345 (25%), Positives = 146/345 (42%), Gaps = 45/345 (13%) Query: 363 GVDLQGMIPVLKHIVSLILSLCGGTASDICI----ARNIT---YKPRKIVFMNSEVKRLS 415 G DL+ + L+ I+S L+ GG S + I RNI ++P ++ ++ + Sbjct: 232 GTDLKAIWYALE-IISSALAERGGEISTLDILYPDGRNIETPRHEPEEMEVDLDFIRSIL 290 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G+++ +D + L R K V +P +R D D+ EE+ G+++I E Sbjct: 291 GLNLSEDDVVMQLLRARLDAECSDGKVRVLIPGYRSDFLHPIDVAEEVSITLGLNKIGYE 350 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE---LE 532 LP + R +++ +R V+ V+ EV+N+ S+ S+ G+ E +E Sbjct: 351 -LPKNVMTVGRPHPVEKV-SRKVRTVMIGLGYQEVLNYIMTSR-ASLFHAVGREEREVVE 407 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV------YENDTPEGQKY 586 I NP+S S +R +L PGLL N +FE+ V EN T + ++ Sbjct: 408 ISNPVSESYSVLRDALFPGLLAFLANNTHVRYPQ-KVFEIGDVVLIDERLENKTRDERRV 466 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPS 646 AA ++D S F D++ L V+ +S + E Sbjct: 467 AAA---------------YADDS---VGFEDIY----SHLKVLFENLSY-RIELEPRKER 503 Query: 647 WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + GR + E V G GE P +L G++ P+ FEV L Sbjct: 504 PFIEGRCASVLREGEEV-GVIGEIDPEVLLNLGITVPVAIFEVAL 547 >gi|331213943|ref|XP_003319653.1| phenylalanyl-tRNA synthetase subunit beta [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309298643|gb|EFP75234.1| phenylalanyl-tRNA synthetase subunit beta [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 635 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 109/518 (21%), Positives = 194/518 (37%), Gaps = 120/518 (23%) Query: 157 IDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKG 216 + + + NR D + +G+ L L +G N S + + + S + Sbjct: 52 LKIEVPANRYDLLCHQGLILAL-RTYIGTQPAPNYSLIIPPPEQQWKAYVRKETSQIRPF 110 Query: 217 FAMCCVKGVR-------------NNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGY 262 FA ++GV+ + + N R+R L A+G +S + +S + Sbjct: 111 FASAILRGVQFDEQRYKDFIELQDKLHGNLCRKRTLVAIGTHDLSTIDHTNKVISYEARP 170 Query: 263 PSHV----------FDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 P + +DA+++ + + S + D+ Y + DN + S Sbjct: 171 PKEIKFAPLNKETEYDATQLMTLYESDKHLSKYLHIIRDSPLYPIIYDN-----SRTVLS 225 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 + II +T DV ++V A LGI V Sbjct: 226 MPPIINSNKTKITLDTRDVFIDVT-------ATDQTKLGI-------------------V 259 Query: 373 LKHIVSLILSLCGGTAS----DICIARNI--TYKPRKI---VFM--NSEVKRLSGIDVPI 421 + I+++ C + DI ++ +Y+ KI VF S + ++G+++ Sbjct: 260 INMIITMFSQYCSKPFTVEPVDIIYEHDLAESYRSPKIEPLVFATRQSYINSVTGLNLTR 319 Query: 422 EDSLRILERLGF-SVIGE--------------------YDKFEVSVPSWRQDVEEKADLV 460 E + +LE++G + IG D VSVP R D+ + DLV Sbjct: 320 EAMIELLEKMGHRASIGRPADGLAINSSTSLALQQAPPEDLLSVSVPPTRPDILHECDLV 379 Query: 461 EEILRIYGVDQIK---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVV 511 EE+ YG + + ++P P+ ++ D V++ A +EV+ Sbjct: 380 EEVAIAYGFNHLAKTFPSTNTVAKPYPINKLSD------------LVRKECAFAGWLEVL 427 Query: 512 NWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 + S +++ F G + + NP + + +RTSLLPGLLK N ++ Sbjct: 428 PLTLCSHDENFKFLRKEDDGSEAVVLSNPATIEFQVVRTSLLPGLLKTIRENRKHSLP-M 486 Query: 568 AIFEVSHVYENDTPEGQKYM------AAGIRKGSSGIE 599 IFEVS V D +K A + K S+G E Sbjct: 487 KIFEVSDVVIKDASLERKAKNLRRLGAVYVGKKSAGFE 524 >gi|2460277|gb|AAB80744.1| PheT [Salmonella enterica subsp. enterica serovar Typhimurium] Length = 150 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 13/152 (8%) Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG--- 583 G L + NPIS +MS MR SL GLL N +R IFE + DT Sbjct: 3 GAEALLLPNPISVEMSAMRLSLWSGLLATVVYNQNRQQNRVRIFETGLRFVPDTQANLGI 62 Query: 584 -QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 Q M AG+ G+ E W+ E VD +D K D +V++ L ++F++ Sbjct: 63 RQDLMLAGVICGNRYDEH----WNLPKET----VDFYDMKGDLEAVLDLTAKLGDIQFKA 114 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNI 674 HPG+S I E + G+ G HP + Sbjct: 115 EMNPALHPGQSAAIYLKDERI-GFNGVVHPEL 145 >gi|116514456|ref|YP_813362.1| EMAP domain-containing protein [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|116093771|gb|ABJ58924.1| EMAP domain [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] Length = 215 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + +ID G Q+ Q+VCGAPN+ G V A PG+ +P I +RG+E Sbjct: 106 HPDSDHLHVTQIDVGDGQDHQIVCGAPNIAQGQKVVVALPGTLMPTGAQIWP-GALRGVE 164 Query: 114 STGMMCSEKELMLS 127 S GM+CS +EL L+ Sbjct: 165 SDGMICSARELGLA 178 >gi|229577206|ref|NP_001153325.1| phenylalanyl-tRNA synthetase, beta subunit [Nasonia vitripennis] Length = 589 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 88/415 (21%), Positives = 159/415 (38%), Gaps = 73/415 (17%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY--- 358 ++ +G + S+ II G H+ NT ++ +E D + A+ + + S Y Sbjct: 221 IIYDKNGVVLSLPPIINGDHSKITLNTKNIFIECTATD-LTKAKIAVDTIVCAFSEYCSS 279 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 ++E + ++ + P K S ++ Y+ KI + GI+ Sbjct: 280 KYEVEI-VEVIYPDNKKFDS----------------PDLKYRVEKI--SSKRATNYVGIN 320 Query: 419 VPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS--- 474 E ++L ++ + + D+ V V R D+ D+ E++ YG + IK Sbjct: 321 QSPEQVAKLLTKMSLKTEVKDGDELHVQVSPTRHDIIHACDIYEDVAIGYGYNNIKKTIP 380 Query: 475 ------EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + PL ++ D+ ++ +A+ E + +S S+E G Sbjct: 381 KTPSIGKEFPLNKLTDQ------------LRETMANAGFTEALTFSLCSREDIADKLGHD 428 Query: 529 RE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ 584 + + I NP + + RT+LLPGLLK N + +FE+S V D Sbjct: 429 IKNVPAVHISNPKTLEFQVGRTTLLPGLLKTIVANRKMPLP-MKLFEISDVILRDP---- 483 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 K G RL + RF + + ++E V S + G Sbjct: 484 --------KAEVGARNERRLCVVYYNKMARFEFVHGVLDRIMHILE--VPWHSNKDNKGY 533 Query: 645 -------PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 P+++ P R G I V+G G HP++L FGL+ P E+ ++ Sbjct: 534 HLRPLEDPTFF-PHRCGEIVAYGN-VIGKIGTLHPDVLTKFGLTIPCTSLEINIE 586 >gi|253745933|gb|EET01526.1| Phenylalanyl-tRNA synthetase beta chain [Giardia intestinalis ATCC 50581] Length = 594 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 44/261 (16%) Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQIKSE----PLPLTQVEDKRNLSLQQSRTRYVKRV 501 VP +RQD+ +AD++E YG + I E P +TQ R L ++ V+ Sbjct: 363 VPFFRQDIIAEADIIENFCISYGYNAIAEEYAKLPDTMTQGCTLREFRLGET----VRAE 418 Query: 502 LASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVD 561 + +E+V +S + S+ G +E+ N +A S+ R+SL PGLL+A + Sbjct: 419 AVACGYIELVLFSLCPGDDSIF---GDLPVELSNTKTAMFSHARSSLAPGLLRAASAH-Q 474 Query: 562 RAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDA 621 A +FEVS V +AG+ K GI +F L+ Sbjct: 475 HASLPLRLFEVSEVLAP---------SAGV-KDDVGIHAVK-----------KFACLYGG 513 Query: 622 KADALSVIEPFVSLDSL--------RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 D ++ LD L + PGR I I LG+ G HPN Sbjct: 514 TTDGFELVHGL--LDHLMRKLAKHFKLVGEDHQTCLPGRRASIIVDDHI-LGWIGVLHPN 570 Query: 674 ILDFFGLSNPICGFEVYLDSI 694 +L + + P E +LD + Sbjct: 571 VLLNYKVPIPCTVLEFFLDRL 591 >gi|294501563|ref|YP_003565263.1| tRNA binding domain-containing protein [Bacillus megaterium QM B1551] gi|294351500|gb|ADE71829.1| tRNA binding domain protein [Bacillus megaterium QM B1551] Length = 201 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 9/118 (7%) Query: 14 TDVSLEKICDTLTSIGLEVE-KVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKH 70 T+ +E++ L+ G E + +VD LSP F + V E++P+ D I ++D G Sbjct: 68 TEEMVEEVNHVLSESGFEGKLEVD----LSPKFVVGYVQEKEKHPNADKLNICKVDVGT- 122 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +Q+VCGAPNV G V A G+ +P + MI+ ++RG+ S+GM+CS KEL L + Sbjct: 123 ETLQIVCGAPNVDAGQKVVVAKVGAVMP-SGMIIKDAELRGVPSSGMICSAKELALPN 179 >gi|312862489|ref|ZP_07722732.1| tRNA binding domain protein [Streptococcus vestibularis F0396] gi|322515937|ref|ZP_08068878.1| tRNA binding domain protein [Streptococcus vestibularis ATCC 49124] gi|311102132|gb|EFQ60332.1| tRNA binding domain protein [Streptococcus vestibularis F0396] gi|322125611|gb|EFX96941.1| tRNA binding domain protein [Streptococcus vestibularis ATCC 49124] Length = 207 Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 D DV++ + + L G E E+++N + F + ++ + +PD D I +++ G + Sbjct: 69 DQDVAV--LNEELAKEGFE-ERLENTQG-PVFVVGQIEEMVPHPDSDHLNICQVNIG-DK 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 ++Q+V GAPN +GL + A PG+ +P +I K+RG +S GMMCS +EL L + Sbjct: 124 KVQIVAGAPNAALGLKTIVALPGAMMPSGALIFP-GKLRGEDSYGMMCSPRELALPNAPQ 182 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 183 KRGIIELDDSAVVG 196 >gi|33337377|gb|AAQ13359.1|U66100_1 unknown [Streptococcus pyogenes] Length = 92 Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD-- 128 Q +Q+V GAPN +GL + A PG+ +P ++I K+RG ES GMMCS +EL L + Sbjct: 2 QTVQIVAGAPNAALGLKTIVALPGAIMPNGSLIFP-GKLRGEESYGMMCSPRELALPNAP 60 Query: 129 DSASIMELPIDAPVG 143 I+EL A VG Sbjct: 61 QKRGIIELDESAVVG 75 >gi|52081482|ref|YP_080273.1| putative tRNA binding protein YtpR [Bacillus licheniformis ATCC 14580] gi|52786858|ref|YP_092687.1| YtpR [Bacillus licheniformis ATCC 14580] gi|319647389|ref|ZP_08001610.1| YtpR protein [Bacillus sp. BT1B_CT2] gi|52004693|gb|AAU24635.1| putative tRNA binding protein YtpR [Bacillus licheniformis ATCC 14580] gi|52349360|gb|AAU41994.1| YtpR [Bacillus licheniformis ATCC 14580] gi|317390435|gb|EFV71241.1| YtpR protein [Bacillus sp. BT1B_CT2] Length = 201 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V E++P+ D ++ +++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVEEKEKHPNADKLSVCKVNVGS-ETLQIVCGAPNVEAGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + MI+ ++RG+ S+GM+CS KEL L D Sbjct: 151 -SGMIIKDAELRGVASSGMICSAKELNLPD 179 >gi|30698883|ref|NP_849879.1| tRNA synthetase beta subunit family protein [Arabidopsis thaliana] gi|332197218|gb|AEE35339.1| phenylalanyl-tRNA synthetase beta chain [Arabidopsis thaliana] Length = 584 Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 79/167 (47%), Gaps = 19/167 (11%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 +V VP R DV D++E++ YG + I P + + L+L + T ++ + Sbjct: 352 KVHVPPSRSDVLHPCDVMEDVAIAYGFNNI-----PTRKPASIKPLTLNE-LTDLLRIEI 405 Query: 503 ASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATG 557 A EVV W S +++ F RE + + NP SAD MR +L+PGLLK G Sbjct: 406 AMCVYTEVVTWLLCSHKEN--FAMLNREDVNSAVIVGNPRSADFEAMRRALMPGLLKTVG 463 Query: 558 RNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIE 599 N ++ IFE+S V D + ++++AA +SG E Sbjct: 464 HN-NKYPKPIKIFEISDVVMLDESKDVGASNRRHLAALYCGATSGFE 509 >gi|323703423|ref|ZP_08115071.1| t-RNA-binding domain protein [Desulfotomaculum nigrificans DSM 574] gi|323531604|gb|EGB21495.1| t-RNA-binding domain protein [Desulfotomaculum nigrificans DSM 574] Length = 126 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 3/107 (2%) Query: 48 KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNV 106 +++S E++PD + + ++ G+ + +Q+VCGA NV GL A G+ +P I Sbjct: 16 EIISTEKHPDAEKLTVCLVNVGQEEPLQIVCGAKNVAPGLKVPVALHGAKLPGGRKIKK- 74 Query: 107 RKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELS 153 K+RG+ S GM+C++ EL D I LP D +G L Y E++ Sbjct: 75 GKLRGVLSNGMICAQDELGFDRDIDGIWVLPEDTKIGS-LVPYKEVT 120 >gi|223043601|ref|ZP_03613646.1| phenylalanyl-tRNA synthetase [Staphylococcus capitis SK14] gi|222443089|gb|EEE49189.1| phenylalanyl-tRNA synthetase [Staphylococcus capitis SK14] Length = 198 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L+++ G ++ +Q+VCGAPNV V A G+ +P Sbjct: 89 LSPKFVVGYVETKEKHPDADKLSVLKVNVG-NETLQIVCGAPNVAAEQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ K+RG++S+GM+CS KEL L + IM L D +G Sbjct: 148 -SGMVIKDAKLRGVDSSGMICSMKELDLPNAPQEKGIMVLNDDYEIG 193 >gi|308163372|gb|EFO65714.1| Phenylalanyl-tRNA synthetase beta chain [Giardia lamblia P15] Length = 589 Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 28/255 (10%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQI--KSEPLPLTQVEDKRNLSLQQSRTRYVK 499 + VP +RQD+ +ADLVE YG + I K LP T + +LQ+ R + Sbjct: 359 LKCHVPFFRQDIIAEADLVENFCISYGYNAIAEKYAKLPSTMTQGS---TLQEFRLGEIV 415 Query: 500 RVLA-SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 R A + E+V +S E + G +E+ N +A S+ R+ L PGLL+A Sbjct: 416 RSEAVACGYTELVLFSLCPAEDFIF---GDLPVELSNTKTAMFSHTRSCLAPGLLRAASA 472 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD- 617 + A +FEVS V T G ++K S G+ +D E F+D Sbjct: 473 H-QHASLPLKLFEVSDVLIPSTDTGDDVGIHAVKKFSCIYGGT----TDGFELVHGFLDH 527 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDF 677 L A +I P+ PGR I +LG+ G HP++L Sbjct: 528 LLRRLAKNFKLI-----------GEDHPTCL-PGRRASIVVDG-CILGWIGVIHPDVLLT 574 Query: 678 FGLSNPICGFEVYLD 692 + + P E +L+ Sbjct: 575 YKVPIPCTLMEFFLN 589 >gi|313665524|ref|YP_004047395.1| tRNA binding domain protein [Mycoplasma leachii PG50] gi|312949208|gb|ADR23804.1| tRNA binding domain protein [Mycoplasma leachii PG50] Length = 161 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K + +Q++CGA NVR ++ V A S +P I Sbjct: 52 FLIGRIIDCEPIEGTHLNICKVDI-KDEILQIICGASNVRKKMISVVATLNSWLPNGTQI 110 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 + KIRG++S GM+CS KEL + ++ I++L Sbjct: 111 IQ-SKIRGVDSFGMLCSYKELNIENEQQGIIDL 142 >gi|196007726|ref|XP_002113729.1| hypothetical protein TRIADDRAFT_50402 [Trichoplax adhaerens] gi|190584133|gb|EDV24203.1| hypothetical protein TRIADDRAFT_50402 [Trichoplax adhaerens] Length = 532 Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 91/407 (22%), Positives = 152/407 (37%), Gaps = 83/407 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 ++ S+G + S+ II G+H NT ++ ++ + Sbjct: 182 IIYDSNGVVLSMPPIINGEHTKLSTNTRNIFIDAKI------------------------ 217 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICI------ARNITY---KPRKIVFMNSEVK 412 VL +V++I CG S + + +TY R + +V Sbjct: 218 ----------VLDTLVTMISEHCGQKYSAEVVDVIQPDGKVVTYPELTTRHEIISLKDVY 267 Query: 413 RLSGIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L+GI + E ++L R+ S VI E + +V VP R D+ I YG + Sbjct: 268 SLAGISLDTEKIAKLLTRMSLSTTVINE-KEVKVEVPPTRHDIH--------IAIAYGYN 318 Query: 471 QI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK----EQSVLFG 525 I +S P T ++ L + +++ +A E + ++ S+ E+ Sbjct: 319 NIPRSMPKSSTIAQEFPINKL----SNLLRQEIAQAGFTEALTFTLCSRDDVSEKLNKNL 374 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 + I NP + + +RT+LLPGLLK N ++ +FE++ V D Sbjct: 375 ASSKATHISNPKTQEFQVVRTTLLPGLLKTVASNRSMSLP-LRLFEIADVVIKDD----- 428 Query: 586 YMAAGIRKGSSGIEGSGR---LWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 K +G R L+ +KS L D L + PF D + Sbjct: 429 -------KTDTGARNERRLCALYYNKSPGFEIIHGLADRSMQLLGI--PFGKSDKGYYIK 479 Query: 643 GAPS-WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFE 688 GA Y PGR I + G G HP+++ F L+ P E Sbjct: 480 GADDPLYFPGRGADIIVHGNRI-GSLGVLHPDVISKFDLNMPCSALE 525 >gi|55823736|ref|YP_142177.1| phenylalanyl-tRNA synthetase-like protein [Streptococcus thermophilus CNRZ1066] gi|55739721|gb|AAV63362.1| phenylalanyl-tRNA synthetase homolog [Streptococcus thermophilus CNRZ1066] Length = 207 Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 9/134 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 D DV++ + + L G E E+++N + F + ++ + +PD D I +++ G + Sbjct: 69 DQDVAI--LNEELAKEGFE-ERLENTQG-PVFVVGQIDEMVPHPDSDHLNICQVNIG-DK 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 ++Q+V GAPN GL + A PG+ +P +I K+RG +S GMMCS +EL L + Sbjct: 124 KVQIVAGAPNASTGLKTIVALPGAMMPSGALIFP-GKLRGEDSYGMMCSPRELALPNAPQ 182 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 183 KRGIIELDDSAVVG 196 >gi|239828073|ref|YP_002950697.1| t-RNA-binding domain protein [Geobacillus sp. WCH70] gi|239808366|gb|ACS25431.1| t-RNA-binding domain protein [Geobacillus sp. WCH70] Length = 201 Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/124 (33%), Positives = 70/124 (56%), Gaps = 8/124 (6%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREA----LSP-FTIVKVLSVERNPDLD-CAILR 64 H D + LE + +++I +EK E LSP F + V +++P+ D ++ + Sbjct: 58 HFDGNGLLELNEELVSAINNILEKNGWNETIEADLSPKFVVGYVKEKKKHPNADKLSVCQ 117 Query: 65 IDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL 124 +D G + +Q+VCGAPNV G V A G+ +P + +I+ ++RG+ S GM+CS +EL Sbjct: 118 VDVGT-EVLQIVCGAPNVEAGQKVVVAKIGAVMP-SGLIIQEAELRGVPSYGMICSAREL 175 Query: 125 MLSD 128 L + Sbjct: 176 ELPN 179 >gi|312868734|ref|ZP_07728926.1| tRNA binding domain protein [Lactobacillus oris PB013-T2-3] gi|311095720|gb|EFQ53972.1| tRNA binding domain protein [Lactobacillus oris PB013-T2-3] Length = 215 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 6/139 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 TD + K+ LT G + + + F + V +E +P D + + G Q Sbjct: 70 TDDQVAKLNQKLTQAGFDQQLTADHTP--KFVVGYVEKMEDHPKSDHLKVTQTRIGADQT 127 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCG+PNV G+ V A PG+ +P+ +I + G+ES GM+C +EL + + D Sbjct: 128 VQIVCGSPNVATGIKVVVARPGAMMPDGKLIWP-GALMGVESDGMLCGFRELRMKNAPDK 186 Query: 131 ASIMELPIDAPVGGRLSDY 149 + +P D G D+ Sbjct: 187 KGLWIIPDDWQEVGEAVDF 205 >gi|73662330|ref|YP_301111.1| tRNA-binding protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494845|dbj|BAE18166.1| putative tRNA-binding protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 199 Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 5/103 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V + +++PD D ++L +D +++Q+VCGAPNV G V A G+ +P + M Sbjct: 93 FVVGYVETKDKHPDADKLSVLSVDVAT-EKLQIVCGAPNVEAGQKVVVAKVGAVMP-SGM 150 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 ++ ++RG+ S+GM+CS KEL L + IM L D VG Sbjct: 151 VIKDAELRGVASSGMICSMKELGLPNAPQEKGIMVLSDDYTVG 193 >gi|223998586|ref|XP_002288966.1| phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335] gi|220976074|gb|EED94402.1| phenylalanyl-trna synthetase [Thalassiosira pseudonana CCMP1335] Length = 620 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 103/466 (22%), Positives = 180/466 (38%), Gaps = 59/466 (12%) Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSI 313 N++ L FD + + + +C K ++ L P VV+ S + S+ Sbjct: 188 NFIPLTHTDEGRAFDGASLMEHYETEASCKHLKPYVPIIKDSPLYP--VVLDSQETVLSL 245 Query: 314 AGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVL 373 II G + NT +V +E D + N+ + T E + PV Sbjct: 246 PPIINGSKSRITLNTKNVFIECTATD-----LTKANIVLDTVVAMFSEYAAIPFSVEPVT 300 Query: 374 KHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGF 433 + V+ ++ + R T + F+NS L GI+V E ++ ++ Sbjct: 301 VNYVNDDNTVVNSYVTPQMYTRKET---TSVKFVNS----LIGINVDPESMAQLCNKIQL 353 Query: 434 ------SVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPL------- 477 S E + EV+VP R D+ D+ E+I YG + I K+ P Sbjct: 354 GPARLLSATSEEEGPILEVTVPPTRSDILHAVDIAEDIGIAYGYNNIVKTIPQTCTVGGE 413 Query: 478 -PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFGGG-QRELEIL 534 PL ++ D ++ + +EV+ S K+ G + + Sbjct: 414 QPLNKLGD------------LLREEIGRAGYIEVLTHGLCSIKDNFTALGRPVTAAVSLS 461 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIA-DFAIFEVSHVYENDTPEGQKYMAAGIRK 593 NP + + +RT+LLPGLLK N + F +FE+S V D + M I Sbjct: 462 NPANVEYQVVRTTLLPGLLKTLQHNKSMSFTGGFKLFEISDVVLAD---DKHVMTETI-- 516 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRS 653 G + + R+ + + F ++ D + + + ES Y PGR+ Sbjct: 517 --VGAKNARRVCATYAGPTSGF-EVIHGLVDRIMTLCEIAPEEEYAGESDVSGTYFPGRA 573 Query: 654 G-IIKTSAE----IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 I+ TS + +G FG HP +L+ F ++ P E+ L+++ Sbjct: 574 AEILLTSPNGGNRVAVGTFGILHPTVLESFDINYPTSAVELDLEAL 619 >gi|47097067|ref|ZP_00234638.1| tRNA-binding domain protein [Listeria monocytogenes str. 1/2a F6854] gi|254832009|ref|ZP_05236664.1| hypothetical protein Lmon1_11670 [Listeria monocytogenes 10403S] gi|254898225|ref|ZP_05258149.1| hypothetical protein LmonJ_00380 [Listeria monocytogenes J0161] gi|254912282|ref|ZP_05262294.1| tRNA-binding domain-containing protein [Listeria monocytogenes J2818] gi|254936609|ref|ZP_05268306.1| tRNA-binding domain-containing protein [Listeria monocytogenes F6900] gi|47014554|gb|EAL05516.1| tRNA-binding domain protein [Listeria monocytogenes str. 1/2a F6854] gi|258609206|gb|EEW21814.1| tRNA-binding domain-containing protein [Listeria monocytogenes F6900] gi|293590263|gb|EFF98597.1| tRNA-binding domain-containing protein [Listeria monocytogenes J2818] Length = 205 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V S E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCKINVGD-KVLQIVCGAPNIDAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSAS--IMELPIDAPVG 143 V A G+ +P + +I+ +RG +S GM+C+ +EL + D A IM L A VG Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPAEKGIMVLEESAVVG 198 >gi|191638703|ref|YP_001987869.1| Phenylalanyl-tRNA synthetase (Beta subunit) [Lactobacillus casei BL23] gi|190713005|emb|CAQ67011.1| Phenylalanyl-tRNA synthetase (Beta subunit) [Lactobacillus casei BL23] gi|327382744|gb|AEA54220.1| tRNA binding domain protein [Lactobacillus casei LC2W] gi|327385931|gb|AEA57405.1| tRNA binding domain protein [Lactobacillus casei BD-II] Length = 213 Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats. Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V PG+ +P+ Sbjct: 96 FVIGKIVDFKDHPDADHLHVTQVDIGNEQ-VQIVCGAPNAALGQTVVVTLPGAMMPDGK- 153 Query: 103 IVNVRKIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVG 143 I+ +RG++S GM+ S +EL + + I+ +P P G Sbjct: 154 IIWPGSLRGVDSYGMISSARELGIPGAPQRRGILVMPDSLPAG 196 >gi|258539943|ref|YP_003174442.1| tRNA binding domain-containing protein [Lactobacillus rhamnosus Lc 705] gi|257151619|emb|CAR90591.1| tRNA binding domain protein [Lactobacillus rhamnosus Lc 705] Length = 323 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V A PG+ +P+ + Sbjct: 207 FVIGKIVDFKDHPDSDHLHVTQVDIGDEQ-VQIVCGAPNAALGQTVVVALPGAMMPDGKI 265 Query: 103 IVNVRKIRGIESTGMMCSEKELML 126 I +RG+ S GM+ S +EL + Sbjct: 266 IWQ-GSLRGVASYGMISSARELAI 288 >gi|56421352|ref|YP_148670.1| hypothetical protein GK2817 [Geobacillus kaustophilus HTA426] gi|56381194|dbj|BAD77102.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 201 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V ++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKTKHPNADKLSVCQVDVGS-EVLQIVCGAPNVAEGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 N +++ ++RG+ S+GM+CS +EL L + Sbjct: 151 -NGLVIQESELRGVRSSGMICSARELGLPN 179 >gi|311069480|ref|YP_003974403.1| putative protein with RNA binding domain [Bacillus atrophaeus 1942] gi|310869997|gb|ADP33472.1| putative protein with RNA binding domain [Bacillus atrophaeus 1942] Length = 201 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + + S E++P+ D +I +++TG + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYIESKEKHPNADKLSICQVNTG-DETVQIVCGAPNVDQGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ ++RG+ S+GM+CS KEL L D Sbjct: 151 -SGLVIKDAELRGVASSGMICSAKELDLPD 179 >gi|295706911|ref|YP_003599986.1| tRNA binding domain-containing protein [Bacillus megaterium DSM 319] gi|294804570|gb|ADF41636.1| tRNA binding domain protein [Bacillus megaterium DSM 319] Length = 201 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 9/118 (7%) Query: 14 TDVSLEKICDTLTSIGLEVE-KVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKH 70 T+ +E++ L+ G E + +VD LSP F + V E++P+ D I ++D G Sbjct: 68 TEEMVEEVNRVLSESGFEGKLEVD----LSPKFVVGYVQEKEKHPNADKLNICKVDVGT- 122 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +Q+VCGAPNV G V A G+ +P + MI+ ++RG+ S+GM+CS KEL L + Sbjct: 123 ETLQIVCGAPNVDAGQKVVVAKVGAVMP-SGMIIKDAELRGVPSSGMICSAKELALPN 179 >gi|242086919|ref|XP_002439292.1| hypothetical protein SORBIDRAFT_09g003950 [Sorghum bicolor] gi|241944577|gb|EES17722.1| hypothetical protein SORBIDRAFT_09g003950 [Sorghum bicolor] Length = 594 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 68/275 (24%), Positives = 114/275 (41%), Gaps = 28/275 (10%) Query: 428 LERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKR 486 L+ S+ GE + VSVP R D+ DL E++ YG + + KS+P +T Sbjct: 339 LQAESHSLKGE-PRISVSVPPTRSDILHARDLSEDVAIAYGFNNVPKSKPKCMT------ 391 Query: 487 NLSLQQSRTRYVKRVLASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISA 539 + +Q R+ ++ A A MEV+ + S E++ + + I NP ++ Sbjct: 392 -IGGRQPLNRFSDKIRAEVARAGYMEVLTFILSSHEENFDMLNRADDKSKAVIIANPRTS 450 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 + +RTSL+ LLK N+D IFEV V D+ G+S Sbjct: 451 EFEVVRTSLMSCLLKTLKHNIDHP-RPIKIFEVGDVVMLDSSRDV---------GASNNR 500 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 L+ ++ + L D+ + P V+ + + P R I TS Sbjct: 501 RLAALYCNRVSGFEEIMGLVDSIVKVVRA--PHVNFGENYYVPTDEPEFFPKRQCKIVTS 558 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +GY G H +L FG+ +P E+ L+++ Sbjct: 559 DGKQVGYLGIVHAEVLRKFGIPDPCTFVEMDLEAL 593 >gi|301122387|ref|XP_002908920.1| phenylalanyl-tRNA synthetase beta chain [Phytophthora infestans T30-4] gi|262099682|gb|EEY57734.1| phenylalanyl-tRNA synthetase beta chain [Phytophthora infestans T30-4] Length = 614 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 25/262 (9%) Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQI-----KSEPLPLTQVEDK--RNLSLQQSRTRYV 498 VP R D+ D++E++ YG + I +++ + + Q +K +L + SR Y+ Sbjct: 364 VPITRSDILHPVDVIEDVGIAYGFNNIPLTIPQTQTIGMAQPLNKLGDHLRDEISRAGYI 423 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 + +L N+ ++++E G + + NP + + +RTS+LPG+LK Sbjct: 424 E-LLTHGLCSHKENFEYLNREDD-----GHSAVVLSNPATVEFEVVRTSMLPGVLKTIQN 477 Query: 559 NVDRAIAD-FAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 N +I + +FE+S V D + A +R+ + G +D E VD Sbjct: 478 NKAMSIKEGLKLFEISDVVVID--DNTDVGAKNVRRICAAYTGP----TDGFEVIHGLVD 531 Query: 618 LFDAKADALSVIE-PFVSLDSLRFESGAPSWYHPGRSGIIKTSAE----IVLGYFGEFHP 672 S +E P + + Y P R + E + LG FG HP Sbjct: 532 RIMQLMGIPSALEMPAGTKEYYTITPAEERTYFPNRCAYVTLQKEDAKPLRLGTFGVLHP 591 Query: 673 NILDFFGLSNPICGFEVYLDSI 694 +L F L NP E+ L+ + Sbjct: 592 QVLKNFDLLNPTSVLEMDLEPL 613 >gi|229916437|ref|YP_002885083.1| t-RNA-binding domain protein [Exiguobacterium sp. AT1b] gi|229467866|gb|ACQ69638.1| t-RNA-binding domain protein [Exiguobacterium sp. AT1b] Length = 204 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 9/89 (10%) Query: 44 FTIVKVLSVERNPDLD----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE 99 F + V S ++PD D C + +ID G +Q+VCGAPNV G V A PG+ +P Sbjct: 97 FVVGYVESAVKHPDADKLSICQV-QIDQGT---VQIVCGAPNVATGQKVVVAKPGAVMP- 151 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +I+ +RG S GM+CS +EL L + Sbjct: 152 TGLIIRPSALRGESSHGMICSARELNLPN 180 >gi|320096270|ref|ZP_08027849.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] gi|319976791|gb|EFW08555.1| phenylalanyl-tRNA synthetase beta subunit [Actinomyces sp. oral taxon 178 str. F0338] Length = 169 Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 6/129 (4%) Query: 648 YHPGRSG--IIKTSAEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 +HPGR+ ++ ++V + GE P+ FGL C FE LD++ I Q T Sbjct: 12 FHPGRAARVFVRAGRDLVEVALAGELSPSTCRAFGLPPRSCAFEADLDAL-IGQMGATAV 70 Query: 705 KKVVHLSSLHPVKRDLAFIVDQHIPAGTLVNIIKN-VDRLIDDVTVFDVFQGKSLGEGKK 763 + V +S+ K D+A +V IP + +++ L + VT+FDV++G + +G + Sbjct: 71 Q-VKGVSTFPLAKEDIALVVPSDIPVARVEQVVRQGAGALAESVTLFDVYEGGQVEKGHR 129 Query: 764 SVAIQVLIQ 772 S+A + ++ Sbjct: 130 SLAFALRLR 138 >gi|171778917|ref|ZP_02919979.1| hypothetical protein STRINF_00840 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282563|gb|EDT47987.1| hypothetical protein STRINF_00840 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 208 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 +D + K+ LT G E+++N SP F + ++ + +PD D I ++ + Sbjct: 68 SDEDVAKLNAELTKEGFS-EQLENDP--SPKFVVGQIKEMVAHPDSDHLNICQVQISDDK 124 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+V GAPN VGL + A PG+ +P ++I +RG +S GMMCS +EL L + Sbjct: 125 TVQIVAGAPNAAVGLKTIVALPGAMMPNGSLIFP-GALRGEKSFGMMCSPRELALPNAPQ 183 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 184 KRGIIELDDTAVVG 197 >gi|319892798|ref|YP_004149673.1| tRNA binding domain protein [Staphylococcus pseudintermedius HKU10-03] gi|317162494|gb|ADV06037.1| tRNA binding domain protein [Staphylococcus pseudintermedius HKU10-03] gi|323464171|gb|ADX76324.1| phenylalanyl-tRNA synthetase, probable [Staphylococcus pseudintermedius ED99] Length = 199 Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats. Identities = 37/90 (41%), Positives = 59/90 (65%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D +I+++D G + +Q+VCGAPN+ G V A G+ +P Sbjct: 89 LSPKFVVGYVQSKEKHPNADKLSIVQVDVGT-ETLQIVCGAPNIDQGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + MI+ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMIIKDAELRGVPSSGMVCSMKELNLPN 176 >gi|302340603|ref|YP_003805809.1| phenylalanyl-tRNA synthetase subunit beta [Spirochaeta smaragdinae DSM 11293] gi|301637788|gb|ADK83215.1| phenylalanyl-tRNA synthetase, beta subunit [Spirochaeta smaragdinae DSM 11293] Length = 573 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 41/296 (13%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLVEEILR 465 S +++L G D+ ++ + L R+G + + + V VP +R D AD+ E+++ Sbjct: 298 SYIQKLLGEDLSAQECIEALSRMGVAASSDSSEDPVLTVRVPEYRNDFLHPADVAEDVMI 357 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--L 523 GV P+ + R LS ++ R +K ++ E++ S++ + + Sbjct: 358 GRGVATFP--PVFPSDYTIGR-LSAEEHFARRIKDIMVGLGYQEMMYNYLGSRKDYIEKM 414 Query: 524 FGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEG 583 G+ + I NP++ + +R S+LP +L++ + + A+ IFE + D + Sbjct: 415 HVEGKEYIRIANPMTENYEYVRASILPNMLESESVSGN-AVYPHKIFETGKIARLDETDN 473 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-------LD 636 G+ G L SD+ F+ +S I +++ LD Sbjct: 474 S---------GTVTKNCLGFLISDREAG-------FNDALSHISAIFYYIAKEYDLRELD 517 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 RF SG R I + + LG FGE HP +L+ +G+ P G E+ LD Sbjct: 518 DPRFISG--------RCARIFSDGK-ELGLFGEIHPVVLESWGIQMPCAGGEIDLD 564 >gi|259047063|ref|ZP_05737464.1| tRNA-binding domain protein [Granulicatella adiacens ATCC 49175] gi|259036113|gb|EEW37368.1| tRNA-binding domain protein [Granulicatella adiacens ATCC 49175] Length = 208 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA- 131 +Q+VCGAPNV+ G V A PG+ +P + I+ ++RG+ S GM+CS +EL L + A Sbjct: 128 LQIVCGAPNVKAGQKVVVAKPGTVMP-SGAIIWAGELRGVASHGMLCSARELGLENAPAK 186 Query: 132 -SIMELPIDAPVG 143 I+ L PVG Sbjct: 187 KGILVLDDATPVG 199 >gi|330507932|ref|YP_004384360.1| phenylalanyl-tRNA synthetase subunit beta [Methanosaeta concilii GP-6] gi|328928740|gb|AEB68542.1| phenylalanyl-tRNA synthetase, beta subunit [Methanosaeta concilii GP-6] Length = 548 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 97/401 (24%), Positives = 166/401 (41%), Gaps = 67/401 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 +++ +D R+ S II G+ + T D+ ++V DP+ K L I+ S E Sbjct: 195 LIVDADDRVLSFPPIINGELTSVTEETEDLFIDVTGTDPV----VHKALNIVVTSLA--E 248 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 RG ++ ++ +K LS D+ A ++K R E RL G D+ Sbjct: 249 RGGKIESVL--VKRSEGDFLS------PDLSPA---SWKVR-----TEEANRLIGFDLTG 292 Query: 422 EDSLRILERLGFSVIGEYDKFE----VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + L+R+ F + ++ + V VP++R D+ D+ E+ + YG D +++ L Sbjct: 293 AELAECLKRMRFGAVTAGEEMDDIVVVQVPAYRADIMHSWDIFEDAAKAYGYDNLEAR-L 351 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMM---------EVVNWSFISKEQSVLFGGGQ 528 P T + + S + R ++ ++A + E+V++ ++ + + G Sbjct: 352 PQTVTVGRAHSS--EVRKGEIREIMAGLGYLETMPFTLTNELVHFQWMRRSAAPEAAGAV 409 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 R +L+PIS + +RTSLL LL+ N + IF V + D A Sbjct: 410 R---VLHPISELHTILRTSLLSSLLEIFALNQHHPLPQ-RIFAAGDVVK-DKKTRMNLAA 464 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 A I G ++ SE R VD + D + I P + Sbjct: 465 ASIHSG-----------ANYSEIRS-VVDAVLREMDLEADIVP-----------TKDRAF 501 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 PGR + + + G FGE HP +L FGL P G E+ Sbjct: 502 MPGRGADLFAEGKRI-GCFGELHPLLLRSFGLEQPAVGLEI 541 >gi|195394483|ref|XP_002055872.1| GJ10622 [Drosophila virilis] gi|194142581|gb|EDW58984.1| GJ10622 [Drosophila virilis] Length = 592 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/263 (23%), Positives = 105/263 (39%), Gaps = 29/263 (11%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D +V +P R DV D+ E+I +G + IK Q+ + L+ T ++ Sbjct: 346 DTLKVKIPPTRHDVIHACDIYEDIAIAFGYNNIKKSLPAFMQIAKQFPLN---KLTEQLR 402 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKA 555 +A E + ++ S++ L E + I NP + + +RT+LLPGLLK Sbjct: 403 EQVAQAGFTEALTFTLCSRDDIGLKLNKDIEAMPAVHIGNPKTLEFQVVRTTLLPGLLKT 462 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 N + +FE+S V +AA G RL + + F Sbjct: 463 LVANRKMPLP-LKLFEISDV----------VLAAA--NSEVGARNERRLCAVNCNKSAGF 509 Query: 616 V---DLFDAKADALSVIEPFVSLDS---LRFESGAPSWYHPGRSGIIKTSAEIVLGYFGE 669 L D LSV P+ + ++ ++ Y PGR + + V+G G Sbjct: 510 EVVHGLLDRVMQLLSV--PWKTGNANQGYYLQAAEDPTYFPGRCAHVMFN-NAVIGKIGV 566 Query: 670 FHPNILDFFGLSNPICGFEVYLD 692 HP++L F L+ P E ++ Sbjct: 567 LHPSVLQAFELTTPCSAVEFTIE 589 >gi|261418167|ref|YP_003251849.1| t-RNA-binding domain protein [Geobacillus sp. Y412MC61] gi|319767873|ref|YP_004133374.1| t-RNA-binding domain-containing protein [Geobacillus sp. Y412MC52] gi|261374624|gb|ACX77367.1| t-RNA-binding domain protein [Geobacillus sp. Y412MC61] gi|317112739|gb|ADU95231.1| t-RNA-binding domain-containing protein [Geobacillus sp. Y412MC52] Length = 201 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V ++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKTKHPNADKLSVCQVDVG-DEVLQIVCGAPNVAEGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 N +++ ++RG+ S+GM+CS +EL L + Sbjct: 151 -NGLVIQESELRGVRSSGMICSARELGLPN 179 >gi|297529024|ref|YP_003670299.1| t-RNA-binding domain protein [Geobacillus sp. C56-T3] gi|297252276|gb|ADI25722.1| t-RNA-binding domain protein [Geobacillus sp. C56-T3] Length = 201 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V ++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKTKHPNADKLSVCQVDVG-GEVLQIVCGAPNVAEGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 N +++ ++RG+ S+GM+CS +EL L + Sbjct: 151 -NGLVIQESELRGVRSSGMICSARELGLPN 179 >gi|282851260|ref|ZP_06260625.1| tRNA binding domain protein [Lactobacillus gasseri 224-1] gi|282557228|gb|EFB62825.1| tRNA binding domain protein [Lactobacillus gasseri 224-1] Length = 104 Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats. Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 3/84 (3%) Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 + +D G +E Q+VCGAPN+ G V A PG+ +P N + ++RG++S GM+CS Sbjct: 3 VTTVDVGNGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGQQIWPGELRGVDSYGMICSA 61 Query: 122 KELMLSD--DSASIMELPIDAPVG 143 +EL L+ IM +P D G Sbjct: 62 RELGLAHAPQKRGIMVVPDDFNAG 85 >gi|254166542|ref|ZP_04873396.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] gi|289596470|ref|YP_003483166.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] gi|197624152|gb|EDY36713.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] gi|289534257|gb|ADD08604.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] Length = 535 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 102/480 (21%), Positives = 188/480 (39%), Gaps = 92/480 (19%) Query: 235 RQRLK-AVGLRSISALVDITNYVSLDRGY---PSHVFDASRISDVLTVRRACSGEKILAL 290 R+R K A+GL + + YV D + P + + ++L + E L Sbjct: 127 RKRKKLAIGLHDFNKVTPPFYYVPKDENFKFIPLGFKNEMSLKEILK-KHPKGVEYAHIL 185 Query: 291 DNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNL 350 +N L +++ S G + S II G T ++ +++ Sbjct: 186 EN----LKAYPIILDSQGNVLSFPPIINGTLTQITHETRNIFIDIT-------------- 227 Query: 351 GIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDI-CIARNITYKPRKIVFMNS 409 G DL + VL +I++ + G + + I + + K K+ + Sbjct: 228 ------------GTDLNTLNSVL-NILACSFADRGASIERVEVIYPDKSIKTPKLEYTKI 274 Query: 410 EVKR-----LSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEEI 463 EV++ + G + E+ L L+R+ F V IG+ +V+VP +R D+ D++E+I Sbjct: 275 EVEKEYIAKILGKKLSDEEILNSLQRMRFDVEIGD-RSIKVTVPPYRMDILHPVDIIEDI 333 Query: 464 LRIYGVDQIKSEPLPLTQ-----VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 + ++ LP + ++D N+ V++++ EV + S Sbjct: 334 AKGLTFQYFRAS-LPRKEKIGSTIKDFENV---------VRKIMLGLGFSEVTTLTITSP 383 Query: 519 --EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + +EI NPI+ D + +R+ L+P L++ +N R + IFE+ +V Sbjct: 384 QIQYDAMRLPRKNFVEIENPITEDGTTLRSWLIPSLMEILRKNKHRELPQ-KIFEIGYVI 442 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV--S 634 + E + I+ S KS DL IE +V Sbjct: 443 KEKKEEHLALLY---------IDSSANFTLSKSYAEAILRDL---------GIEEYVIRE 484 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ F SG + + G +G+FGE HP +L+ F L P E+ L I Sbjct: 485 IEHNSFISGRAAGIYKGDE----------IGFFGEIHPEVLENFELGYPTIAMELNLSKI 534 >gi|124516419|gb|EAY57927.1| Phenylalanyl-tRNA synthetase beta chain [Leptospirillum rubarum] Length = 569 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 109/449 (24%), Positives = 173/449 (38%), Gaps = 83/449 (18%) Query: 267 FDAS-RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAG-C 324 FDAS + D+L K L + Y L + DG + S II +H G Sbjct: 174 FDASLSLRDILEHHPKGKTYKSLLSSREAYPL-----LRNEDGTVLSFPPIINARHTGEV 228 Query: 325 DDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLC 384 +++ VE +D QG + ++ +I++ L Sbjct: 229 TAPDSELFVEATGFD---------------------------QGRVTLVLNILAANLFDR 261 Query: 385 GGTASDICIARN---ITYK----PRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG 437 G T + + + N I Y P +V + V R++G D+ E + L G+ + Sbjct: 262 GFTLTPVTVRENGKSIRYPQLRGPDILVPADLPV-RVTGEDIDPEIFRQKLLDYGYDAVE 320 Query: 438 -EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTR 496 + D + V P +R D+ D VE+ L G D LP + K + + T Sbjct: 321 VQPDGYLVRAPFYRDDILHPVDCVEDFLISRGYDSFAPT-LPSSFTVGKEDPARAPEET- 378 Query: 497 YVKRVLASRAMMEVVN--WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLK 554 V+R++ E+++ + I K + L +EI NP+S +R++LLP LL Sbjct: 379 -VRRLMTGLGFQEILSNILTSIEKNTTDLGRPSDTTVEIDNPVSRQYGVVRSTLLPFLLS 437 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 + ++ R +FEV V E T GSS + E+ Sbjct: 438 SETQS-SRFPYPHRLFEVGEVLEKTT------------GGSSVV-----------REKML 473 Query: 615 FVDLFDAKADALSVIEP--FVSLDSLRFESG------APSWYHPGRSGIIKTSAEI-VLG 665 F L +LS + F L + FE AP Y GRSG ++ S +G Sbjct: 474 FSGLLSHPQASLSELAGMVFEVLRHMGFEPALSALETAP--YISGRSGALQLSGHSQPVG 531 Query: 666 YFGEFHPNILDFFGLSNPICGFEVYLDSI 694 GE HP L+ +G+ P FE+ L I Sbjct: 532 EIGEVHPEWLERWGIRMPTVLFEIELSKI 560 >gi|296332041|ref|ZP_06874505.1| putative protein with RNA binding domain [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675564|ref|YP_003867236.1| putative protein with RNA binding domain [Bacillus subtilis subsp. spizizenii str. W23] gi|296150812|gb|EFG91697.1| putative protein with RNA binding domain [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413808|gb|ADM38927.1| putative protein with RNA binding domain [Bacillus subtilis subsp. spizizenii str. W23] Length = 201 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D ++ +++ G+ + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVESKEKHPNADKLSVCKVNVGE-ETLQIVCGAPNVDQGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +++ ++RG+ S+GM+CS KEL L D A Sbjct: 151 -SGLVIKDAELRGVPSSGMICSAKELALPDAPA 182 >gi|228478052|ref|ZP_04062663.1| emap domain protein [Streptococcus salivarius SK126] gi|228250232|gb|EEK09485.1| emap domain protein [Streptococcus salivarius SK126] Length = 207 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 D DV++ + + L G E E+++N + F + ++ + +PD D I +++ G + Sbjct: 69 DQDVAV--LNEELAKEGFE-ERLENTQG-PVFVVGQIDEMVAHPDSDHLNICQVNIG-DK 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 ++Q+V GAPN +GL + A PG+ +P +I K+RG +S GMMC+ +EL L + Sbjct: 124 KVQIVAGAPNAALGLKTIVALPGAMMPSGALIFP-GKLRGEDSYGMMCAPRELALPNAPQ 182 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 183 KRGIIELDDSAVVG 196 >gi|322374117|ref|ZP_08048651.1| tRNA binding domain protein [Streptococcus sp. C150] gi|321277083|gb|EFX54154.1| tRNA binding domain protein [Streptococcus sp. C150] Length = 207 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 9/134 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 D DV++ + + L G E E+++N + F + ++ + +PD D I +++ G + Sbjct: 69 DQDVAV--LNEELAKEGFE-ERLENTQG-PVFVVGQIDEMVAHPDSDHLNICQVNIG-DK 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 ++Q+V GAPN +GL + A PG+ +P +I K+RG +S GMMC+ +EL L + Sbjct: 124 KVQIVAGAPNAALGLKTIVALPGAMMPSGALIFP-GKLRGEDSYGMMCAPRELALPNAPQ 182 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 183 KRGIIELDDSAVVG 196 >gi|126465162|ref|YP_001040271.1| phenylalanyl-tRNA synthetase subunit beta [Staphylothermus marinus F1] gi|126013985|gb|ABN69363.1| phenylalanyl-tRNA synthetase beta subunit [Staphylothermus marinus F1] Length = 558 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 62/292 (21%), Positives = 123/292 (42%), Gaps = 26/292 (8%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 +V+++ GI + ++ L+ L ++G + + ++ P +R D++ D+VE+I G Sbjct: 284 DVEKILGIKIDTKNILKYLNKMGHETVEVRNNTIKIVTPPYRIDIKSWIDIVEDIAMAIG 343 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQSVLFG-G 526 D I + L + + +R ++++L E+ ++ + + Q +FG Sbjct: 344 YDIIGIKANKLPPATHPGRIHPLEYISRLIRKILVGYGYTEITSYMMSNPRAQLEMFGLT 403 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 ++ + +LNP + +R L PGLL+ N ++ + IFE+ V D P + Sbjct: 404 DEKIITVLNPKMDKYTGLRRWLTPGLLEVIVENKEKQ-SSMKIFEIGDVAILD-PNTETG 461 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--FESGA 644 R G + G L D L+++ ++ L FE Sbjct: 462 ARIERRVGIAITHGKATL------------------TDGLAIVSTILNRLKLNPTFEKTY 503 Query: 645 PSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 P R+ IK E +G+ E P++L G+ P+ E+ L+ + I Sbjct: 504 IQGMLPERTASIKIGGE-EIGFVAEIRPDLLYSLGVPFPVVVSEIVLNKLLI 554 >gi|145610829|ref|XP_368368.2| hypothetical protein MGG_00876 [Magnaporthe oryzae 70-15] gi|145018179|gb|EDK02458.1| hypothetical protein MGG_00876 [Magnaporthe oryzae 70-15] Length = 571 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 118/298 (39%), Gaps = 16/298 (5%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFEVSVPSWRQDVEEKAD 458 +PR++ + + G+ E ++L ++ F EV +P R D+ D Sbjct: 282 EPRRMEVEVDYINQCCGLSESAEGICKLLAKMAFVAKPLSASMIEVFIPPTRSDILHACD 341 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E++ YG + + LP + L + + + V+ A EV+ S Sbjct: 342 VMEDVAVAYGFNNLPRS-LPTKSATVGKGLPINK-LSDIVRAECAMAGWKEVMPLVLCSH 399 Query: 519 EQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH 574 +++ + G+ + I NP SA+ +RTSLLPGLLK N + I E S Sbjct: 400 DENFAWLNRVDDGKTAVRIANPKSAEYQVVRTSLLPGLLKTVRENKSVKLP-LMIMETSD 458 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 V D E + A +R ++ G+ + R + + + E Sbjct: 459 VVVKD--EALERKARNVRHWAAAYCGTTSGFEVVHGLLDRIMSMLRVPVGTYYIAE---- 512 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 +D F G + + G + + +G G HP +LD F L P+ E+ L+ Sbjct: 513 IDEPTFFGGRAAAVFLRQGG--EKGEAVRIGELGVLHPTVLDKFDLRYPVSTLEINLE 568 >gi|312873667|ref|ZP_07733714.1| tRNA binding domain protein [Lactobacillus iners LEAF 2052A-d] gi|312875035|ref|ZP_07735053.1| tRNA binding domain protein [Lactobacillus iners LEAF 2053A-b] gi|311089430|gb|EFQ47856.1| tRNA binding domain protein [Lactobacillus iners LEAF 2053A-b] gi|311090920|gb|EFQ49317.1| tRNA binding domain protein [Lactobacillus iners LEAF 2052A-d] Length = 214 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 72 LDILNDQLTKAGF-----DDKLELGKPTLVYGFVKTCESHPDSDHLHVTTINVGD-AEYQ 125 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 126 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 176 >gi|295399558|ref|ZP_06809540.1| t-RNA-binding domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312109887|ref|YP_003988203.1| t-RNA-binding domain-containing protein [Geobacillus sp. Y4.1MC1] gi|294979024|gb|EFG54620.1| t-RNA-binding domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311214988|gb|ADP73592.1| t-RNA-binding domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 201 Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V +++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVKEKKKHPNADKLSVCQVDVGT-ETLQIVCGAPNVEAGQKVVVAKIGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ ++RG+ S GM+CS +EL L + Sbjct: 151 -SGLVIQEAELRGVPSYGMICSARELELPN 179 >gi|146317800|ref|YP_001197512.1| EMAP domain-containing protein [Streptococcus suis 05ZYH33] gi|146319993|ref|YP_001199704.1| EMAP domain-containing protein [Streptococcus suis 98HAH33] gi|253751054|ref|YP_003024195.1| tRNA-binding protein [Streptococcus suis SC84] gi|253752955|ref|YP_003026095.1| tRNA-binding protein [Streptococcus suis P1/7] gi|253754778|ref|YP_003027918.1| tRNA-binding protein [Streptococcus suis BM407] gi|145688606|gb|ABP89112.1| EMAP domain protein [Streptococcus suis 05ZYH33] gi|145690799|gb|ABP91304.1| EMAP domain protein [Streptococcus suis 98HAH33] gi|251815343|emb|CAZ50914.1| putative tRNA-binding protein [Streptococcus suis SC84] gi|251817242|emb|CAZ54970.1| putative tRNA-binding protein [Streptococcus suis BM407] gi|251819200|emb|CAR44385.1| putative tRNA-binding protein [Streptococcus suis P1/7] gi|292557599|gb|ADE30600.1| phenylalanyl-tRNA synthetase-like protein [Streptococcus suis GZ1] gi|319757309|gb|ADV69251.1| EMAP domain-containing protein [Streptococcus suis JS14] Length = 207 Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats. Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 5/103 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I +++ G + +Q+V GAPN GL + A PG+ +P ++ Sbjct: 96 FVVGQIVELVPHPDSDHLNICQVNVGD-KTVQIVAGAPNAAQGLKTIVALPGAMMPSGSL 154 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSA--SIMELPIDAPVG 143 I K+RG +S GMMCS +EL L + I+EL A VG Sbjct: 155 IFP-GKLRGEDSFGMMCSPRELALPNAPQVRGIIELDDSAVVG 196 >gi|46907838|ref|YP_014227.1| tRNA-binding domain-containing protein [Listeria monocytogenes serotype 4b str. F2365] gi|46881107|gb|AAT04404.1| tRNA-binding domain protein [Listeria monocytogenes serotype 4b str. F2365] Length = 205 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 9/134 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + ++ + G E E V + LSP F + V S E++P+ D + RI+ G + Sbjct: 70 TEELVAQMNQVIEKAGFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCRINVG-DE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S GM+C+ +EL + D Sbjct: 126 VLQIVCGAPNIDAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPT 184 Query: 130 SASIMELPIDAPVG 143 IM L A VG Sbjct: 185 EKGIMVLEESAVVG 198 >gi|156098274|ref|XP_001615169.1| phenylalanyl-tRNA synthetase beta chain [Plasmodium vivax SaI-1] gi|148804043|gb|EDL45442.1| phenylalanyl-tRNA synthetase beta chain, putative [Plasmodium vivax] Length = 617 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 55/321 (17%) Query: 411 VKRLSGI-DVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 V++LSGI ++ ++D +L+++ S + + F V VP +R D+ D+VE+I YG Sbjct: 309 VRKLSGILNLSVKDVEPLLKKMMITSKVIDSSTFTVDVPFYRSDIMHFCDIVEDIAIAYG 368 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV------ 522 I SE + ++ K +LS + T + VLA EV+ + +SK ++ Sbjct: 369 YGNIVSEKI---EIAKKNSLS---ACTELFRNVLAECTYTEVMTNALLSKRENYDCMLRK 422 Query: 523 ------------LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA--DFA 568 + ++I+N +++ +RTSL+ +LK N R + F Sbjct: 423 HRSYDDRKINLDEYNPLAPPVQIMNSKTSEYEIVRTSLIVNMLKFVSANKHRELPLRFFE 482 Query: 569 IFEVSHVYENDTPE---GQKYMA--------AGIRKGSSGIEG---SGRLWSD-KSEERC 613 I +VS+ + T ++Y++ AG+ + +E +L+SD K EE+ Sbjct: 483 IGDVSYTTYDRTDTNAVNKRYLSVIFADKFTAGLEEAHGMLETVLKEFQLFSDYKIEEKS 542 Query: 614 RFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPN 673 + + ++D + P PS+ + I+ + G G HP Sbjct: 543 K--ENVAIRSDVFYKLVP----------KEDPSFLNERVVDIVLCPHNLKFGIMGIIHPK 590 Query: 674 ILDFFGLSNPICGFEVYLDSI 694 +L+ F + P+ E+ +++I Sbjct: 591 VLENFSIDIPVSVIEINIETI 611 >gi|16803647|ref|NP_465132.1| hypothetical protein lmo1607 [Listeria monocytogenes EGD-e] gi|224499186|ref|ZP_03667535.1| hypothetical protein LmonF1_05627 [Listeria monocytogenes Finland 1988] gi|224501451|ref|ZP_03669758.1| hypothetical protein LmonFR_02872 [Listeria monocytogenes FSL R2-561] gi|16411043|emb|CAC99685.1| pheT [Listeria monocytogenes EGD-e] Length = 205 Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D + +I+ G + +Q+VCGAPN+ VG V A G+ +P Sbjct: 94 LSPKFVVGYVESKEKHPNADKLNVCKINVG-DKVLQIVCGAPNIDVGQKVVVAKIGAVMP 152 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + +I+ +RG +S GM+C+ +EL + D IM L A +G Sbjct: 153 -SGLIIKPSNLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIG 198 >gi|55821820|ref|YP_140262.1| phenylalanyl-tRNA synthetase-like protein [Streptococcus thermophilus LMG 18311] gi|116628528|ref|YP_821147.1| EMAP domain-containing protein [Streptococcus thermophilus LMD-9] gi|55737805|gb|AAV61447.1| phenylalanyl-tRNA synthetase homolog [Streptococcus thermophilus LMG 18311] gi|116101805|gb|ABJ66951.1| EMAP domain [Streptococcus thermophilus LMD-9] gi|312279161|gb|ADQ63818.1| Phenylalanyl-tRNA synthetase-like protein [Streptococcus thermophilus ND03] Length = 207 Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 9/134 (6%) Query: 13 DTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 D DV++ + + L G E E+++N + F + ++ + +PD D I +++ G + Sbjct: 69 DQDVAI--LNEELAKEGFE-ERLENTQG-PVFVVGQIDEMVPHPDSDHLNICQVNIG-DK 123 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 ++Q+V GAPN GL + A PG+ +P +I K+RG +S GMMCS +EL L + Sbjct: 124 KVQIVAGAPNASPGLKTIVALPGAMMPSGALIFP-GKLRGEDSYGMMCSPRELALPNAPQ 182 Query: 130 SASIMELPIDAPVG 143 I+EL A VG Sbjct: 183 KRGIIELDDSAVVG 196 >gi|289550502|ref|YP_003471406.1| tRNA binding domain protein [Staphylococcus lugdunensis HKU09-01] gi|315657992|ref|ZP_07910866.1| tRNA-binding domain protein [Staphylococcus lugdunensis M23590] gi|289180034|gb|ADC87279.1| tRNA binding domain protein [Staphylococcus lugdunensis HKU09-01] gi|315497028|gb|EFU85349.1| tRNA-binding domain protein [Staphylococcus lugdunensis M23590] Length = 199 Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++P+ D +IL +D + +Q+VCGAPNV G V A G+ +P Sbjct: 90 LSPKFVVGYVKTKEKHPNADKLSILSVDVAT-EVLQIVCGAPNVEAGQKVVVAKVGAVMP 148 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG++S+GM+CS KEL L + Sbjct: 149 -SGMVIKDAQLRGVDSSGMVCSMKELNLPN 177 >gi|309803480|ref|ZP_07697574.1| tRNA binding domain protein [Lactobacillus iners LactinV 11V1-d] gi|309806667|ref|ZP_07700663.1| tRNA binding domain protein [Lactobacillus iners LactinV 03V1-b] gi|308164489|gb|EFO66742.1| tRNA binding domain protein [Lactobacillus iners LactinV 11V1-d] gi|308166972|gb|EFO69155.1| tRNA binding domain protein [Lactobacillus iners LactinV 03V1-b] Length = 199 Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 57 LDILNDQLTKAGF-----DHKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-AEYQ 110 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 111 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 161 >gi|223937570|ref|ZP_03629473.1| ferredoxin-fold anticodon-binding [bacterium Ellin514] gi|223893733|gb|EEF60191.1| ferredoxin-fold anticodon-binding [bacterium Ellin514] Length = 193 Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 94/196 (47%), Gaps = 16/196 (8%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI-----VLGYFGEF 670 VD++D K ++E F+ +R G P +G+ SA I LG G+ Sbjct: 8 VDVYDLKG----ILEEFLEHFGVR---GVNHARRPDSTGLFLESATISLGKNALGEMGQL 60 Query: 671 HPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDLAFIVDQHIPA 730 P + + L + + + ++ + +R ++K L + ++RD+A +V + Sbjct: 61 LPALAKHYDLRDAV---LLAELNLDLLLARRNQSKTFKALPAYPAIRRDVAMLVPEATTH 117 Query: 731 GTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDR 789 ++N ++ + ++ + +FDVF+GK++ +G+KS+A + + T D ++ ++ Sbjct: 118 EAVLNTVRQTKPQNLEAIELFDVFRGKNVPDGQKSMAYAFTYRNPERTLTDAEVNAAQEK 177 Query: 790 IVENVVKKTNAVLRSS 805 +VE + + A +R S Sbjct: 178 LVEQLKRTIQATVRES 193 >gi|169350452|ref|ZP_02867390.1| hypothetical protein CLOSPI_01220 [Clostridium spiroforme DSM 1552] gi|169292772|gb|EDS74905.1| hypothetical protein CLOSPI_01220 [Clostridium spiroforme DSM 1552] Length = 199 Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 3/86 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +V+S+ +PD D I +++ G ++E Q+VCGAPNV G V A G+ +P + + Sbjct: 94 FIVGEVVSMCDHPDSDHLHICQVNLG-NEETQIVCGAPNVEQGQRVVVATIGAIMP-SGL 151 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 ++ K+R ++S GM+CS +EL L + Sbjct: 152 VIKPSKLRKVDSNGMICSARELGLPN 177 >gi|302307098|ref|NP_983621.2| ACR219Wp [Ashbya gossypii ATCC 10895] gi|299788836|gb|AAS51445.2| ACR219Wp [Ashbya gossypii ATCC 10895] Length = 595 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 57/327 (17%) Query: 398 TYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL---GFSVIGEYDKFEVSVPSWRQDVE 454 + RKI + G+ + +E+ L+++ G + D EVS+P R D+ Sbjct: 291 NFTERKINVSAEYINSCLGLQLSLEEICACLKKMSLHGKPAGNDKDTIEVSIPITRPDIL 350 Query: 455 EKADLVEEILRIYGVDQIK-----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 D++E+ YG + + + PLP+ +V D + R+ + Sbjct: 351 HPCDVLEDAAVGYGYNNLPKHNKLSNANFVAAPLPINKVSD-------------IFRIAS 397 Query: 504 SRA-MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGR 558 S+A +EV+ + S +++ F G +++ NP +A+ +RTSLL G+LK Sbjct: 398 SQASWLEVLPLTLCSHDENFKFLRLEDDGTTAVKLANPKTAEYQVVRTSLLSGILKTVRE 457 Query: 559 NVDRAIADFAIFEVSH-VYENDTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEER 612 N +A+ +FE V++N E +++ AA +SG E G L R Sbjct: 458 NRKQALP-IKVFESGDVVFKNPALERKAYNERHWAAVYVGKNSGFEIIQGLLGKIMQTFR 516 Query: 613 CRFVDLFDAKADALSV-IEPFVSLDSLRFESGAPSWYHPGRSGII----KTSAEI-VLGY 666 ++ + +D IE S+ + Y PGR + + AE+ +G+ Sbjct: 517 TSWLPDYGKDSDGRGYWIEEDTSIPT----------YFPGRGAKVMFRSRQGAEVKQIGH 566 Query: 667 FGEFHPNILDFFGLSNPICGFEVYLDS 693 G HP +++ F + P G V L+S Sbjct: 567 LGVLHPEVMNNFEI--PYAGSYVELNS 591 >gi|157868268|ref|XP_001682687.1| phenylalanyl-tRNA synthetase [Leishmania major strain Friedlin] gi|68126142|emb|CAJ07195.1| putative phenylalanyl-tRNA synthetase [Leishmania major strain Friedlin] Length = 633 Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 67/274 (24%), Positives = 105/274 (38%), Gaps = 44/274 (16%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL- 502 V+VP R DV AD++E++ YG D I T VE K + + Q+ V ++L Sbjct: 367 VTVPPMRTDVIGVADVMEDVAIAYGYDNI-------TYVECKTHGPVTQTPLSKVAQLLR 419 Query: 503 ---ASRAMMEVVNWSFISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKAT 556 A E++ S S+ + G I NP + + R SLLPG+LK Sbjct: 420 TEMACAGYTELLTLSLCSRADAFESLGRVDNDVAAHIANPQTMEFQVCRPSLLPGILKTL 479 Query: 557 GRNVDRAI-------ADFA----------IFEVSHVYENDTPEGQKYMAAGIRKG-SSGI 598 N + + AD + E+ Y + Q+++AA G SSG Sbjct: 480 ATNKSKPLPQRFFECADVVLLDNERNFPPVLELKTDYASCGARNQRHLAAAHCNGSSSGF 539 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-- 656 E L + L + + I D E G + PGR+ I Sbjct: 540 ESIHGLTE---------LALLKLGVPSKAAIADDYEGDYYTLEKGEDGAFFPGRAMDIIL 590 Query: 657 -KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + +G+ G HPN L + + +P E+ Sbjct: 591 HRAGQAVRIGHLGVIHPNTLKAYDIPSPCSYMEL 624 >gi|331701580|ref|YP_004398539.1| t-RNA-binding domain-containing protein [Lactobacillus buchneri NRRL B-30929] gi|329128923|gb|AEB73476.1| t-RNA-binding domain-containing protein [Lactobacillus buchneri NRRL B-30929] Length = 212 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V SVE +P + I + D G +++Q+V G+PN+R + V A G+ +P+ Sbjct: 98 FVVGYVKSVEDHPKANHLQITKTDIGTGKDVQIVSGSPNMREDIRVVVALSGAMMPDGQ- 156 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 I+ K+RG+ES GM+CS +EL L + + LP D VG Sbjct: 157 IIWPGKLRGVESDGMICSGRELGLPNAPQVPGALILPDDYQVG 199 >gi|309805384|ref|ZP_07699433.1| tRNA binding domain protein [Lactobacillus iners LactinV 09V1-c] gi|308165311|gb|EFO67545.1| tRNA binding domain protein [Lactobacillus iners LactinV 09V1-c] Length = 217 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 75 LDILNDQLTKAGF-----DDKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-AEYQ 128 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 129 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 179 >gi|119873166|ref|YP_931173.1| phenylalanyl-tRNA synthetase subunit beta [Pyrobaculum islandicum DSM 4184] gi|119674574|gb|ABL88830.1| phenylalanyl-tRNA synthetase beta subunit [Pyrobaculum islandicum DSM 4184] Length = 518 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 127/548 (23%), Positives = 213/548 (38%), Gaps = 119/548 (21%) Query: 157 IDVSLTPNRSDCIGVRGIALDL-----VAAGLGKLKEINISCPLSSESIPLEIKFDLDDS 211 + + ++ +R D V G+A L V GL ++ + S L +E I E + Sbjct: 41 VRLEVSHDRPDHFSVEGLARTLKGIAEVEVGLPRITLLQSSIELKAEYIE-ERPY----- 94 Query: 212 SLCKGFAMCCVKGVR-NNVAPNWMRQ-------------RLKAVGLRSISALVDITNY-- 255 +M V+GV+ +N A + Q R A+G IS + Y Sbjct: 95 -----ISMAVVRGVKLDNEAIRQLIQLQEKLHDTYGRGRRRFAIGFYDISKIKPPIYYKR 149 Query: 256 VSLDRGYPSHVFDAS-RISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIA 314 VS + Y FD +IS++ + G K L N+E P +V S G+I I Sbjct: 150 VSQEDEYVPLGFDKPVKISEMYKLTE--QGIKYSTLINKE---RPPALV-DSAGQIMVII 203 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 ++G + ++T DVL++V G DL+ + V+ Sbjct: 204 PVLGSECCKITEDTHDVLIDVT--------------------------GTDLRAINNVMS 237 Query: 375 HIVSLILSLCGGTASDICI---ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERL 431 ++ +L +I A TY +IV + L GI + I+D ++++E+ Sbjct: 238 ILIYALLERSSTKTVEIITGGHAYRHTY--HRIVVDLENINDLLGIRLSIQDFVKLVEKA 295 Query: 432 GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQ 491 S Y + V P +R ++ D+ EE+ + G + E P KR+++ Sbjct: 296 RLS----YQEGGVLAPPYRINMLSWVDVAEEVAIMLGYNNFPREA-PKISTSGKRHIT-- 348 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 + T V+R+L S +EV N+ + + + I+NPIS +R S++ Sbjct: 349 EVLTEEVRRILLSMGFVEVNNYVLTDSSIANIC----KPAHIINPISELYGYVRCSMITQ 404 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 L+ T + R + +FEV V EN GR W D + Sbjct: 405 LI-VTASTMRR--KEIKLFEVGDVVEN-----------------------GRTWRDAT-- 436 Query: 612 RCRFVDLFDAK--ADALSVIEPFVSLDSLRFESGAPS--WYHPGRSGIIKTSAEIVLGYF 667 F+ D D LSVI+ + + S W P R+ I+ V+GY Sbjct: 437 ---FLLSRDGVTLTDGLSVIKTLCNRLGFTCQISETSLEWGIPNRAASIRGD---VVGYI 490 Query: 668 GEFHPNIL 675 E +P +L Sbjct: 491 AEVNPGLL 498 >gi|157106871|ref|XP_001649522.1| phenylalanyl-tRNA synthetase beta chain [Aedes aegypti] gi|108879755|gb|EAT43980.1| phenylalanyl-tRNA synthetase beta chain [Aedes aegypti] Length = 590 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 86/399 (21%), Positives = 151/399 (37%), Gaps = 61/399 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G H+ T ++ +E Sbjct: 224 VIYDSNGVVLSLPPIINGDHSKIKLETKNIFIECT------------------------- 258 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARN-----ITYKP---RKIVFMNSEVK 412 DL VL +V + + C + + C N + Y RK + +V Sbjct: 259 -ATDLTKAKIVLDTLVCMFSAHCAKPFTVEACDVVNPSGETVQYPELAFRKEIVSAEKVN 317 Query: 413 RLSGIDVPIEDSLRILERL--GFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 L GI E ++L RL D+ EV +P R D+ D+ E++ YG + Sbjct: 318 ALIGIKESPESMAKMLNRLLPTSQSAANKDQLEVLIPPTRHDMLHACDIYEDVAIAYGYN 377 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 +I + LP T + R L + T ++ +A E + ++ S++ + E Sbjct: 378 RI-PKTLPGT-MHIARQYPLNK-LTEQLREQIAQAGFTEGLTFTLCSRDDIASKLNQKIE 434 Query: 531 ----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKY 586 + I NP + + +RT+L+PGLLK N + +FEVS V Sbjct: 435 DIPAVHIANPKTLEFQVVRTTLIPGLLKTLAANRKMPLP-LKLFEVSDV----------- 482 Query: 587 MAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLRFESGAP 645 + G R+ + + F + + ++E P+ + ++ Sbjct: 483 -VLAVPGTEVGARNQRRVCAVNCNKTAGFEVVHGLLDRVMQLLEVPWDKENGYYLKAVDD 541 Query: 646 SWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + Y PGR + I+ A+I G G HP +L F ++ P Sbjct: 542 AAYFPGRCASIVYKGADI--GRIGVLHPTVLHAFEITTP 578 >gi|255074885|ref|XP_002501117.1| predicted protein [Micromonas sp. RCC299] gi|226516380|gb|ACO62375.1| predicted protein [Micromonas sp. RCC299] Length = 665 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 67/262 (25%), Positives = 104/262 (39%), Gaps = 26/262 (9%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL--PLTQVEDKRNLSLQQSRTRYVK 499 V VP R D+ D+ E++ YG + I E + +T V ++ L+ + + V+ Sbjct: 416 LRVEVPPTRSDILHPCDVAEDVAIAYGYNNINKEKVGPNVTTVGAQQPLN---NFSDLVR 472 Query: 500 RVLASRAMMEVVNWSFISKEQSVL----FGGGQRELEILNPISADMSNMRTSLLPGLLKA 555 + +A++ EV+ W S + + G+ + NP S D+ R+SLL G+LKA Sbjct: 473 QEMAAQGFAEVLTWILCSHDDNFANVSRADDGKLAAIVANPSSQDVQVARSSLLQGVLKA 532 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRF 615 G N D + +FEV V D G S RL S F Sbjct: 533 MGTNKDAPVP-AKLFEVGDVVLLDESR------------DVGARNSRRLLVLYSNTTSGF 579 Query: 616 VDLFDAKADALSVI---EPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHP 672 + A + V +P V S + Y PGR I + G G HP Sbjct: 580 EVVHGALDRVMLVTGAAKPGVDAGYTLDTSMDEATYFPGRQAAIVRDGRRI-GVMGVVHP 638 Query: 673 NILDFFGLSNPICGFEVYLDSI 694 +L F + NP E+ L+ + Sbjct: 639 TVLGKFDIVNPCSVLELDLEPL 660 >gi|282917002|ref|ZP_06324760.1| hypothetical protein SATG_00495 [Staphylococcus aureus subsp. aureus D139] gi|282319489|gb|EFB49841.1| hypothetical protein SATG_00495 [Staphylococcus aureus subsp. aureus D139] Length = 198 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 4/92 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDS 130 + M++ ++RG+ S+GM+CS KEL L + S Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPNAS 178 >gi|312872165|ref|ZP_07732238.1| tRNA binding domain protein [Lactobacillus iners LEAF 2062A-h1] gi|311092249|gb|EFQ50620.1| tRNA binding domain protein [Lactobacillus iners LEAF 2062A-h1] Length = 217 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 75 LDILNDQLTKAGF-----DDKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQ 128 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 129 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 179 >gi|302190867|ref|ZP_07267121.1| EMAP domain-containing protein [Lactobacillus iners AB-1] Length = 214 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 72 LDILNDQLTKAGF-----DDKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQ 125 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 126 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 176 >gi|229552570|ref|ZP_04441295.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus rhamnosus LMS2-1] gi|229314122|gb|EEN80095.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus rhamnosus LMS2-1] Length = 212 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V A PG+ +P+ + Sbjct: 96 FVIGKIVDFKDHPDSDHLHVTQVDIGDEQ-VQIVCGAPNAALGQTVVVALPGAMMPDGKI 154 Query: 103 IVNVRKIRGIESTGMMCSEKELML 126 I +RG+ S GM+ S +EL + Sbjct: 155 IWQ-GSLRGVASYGMISSARELAI 177 >gi|217964240|ref|YP_002349918.1| tRNA-binding domain protein [Listeria monocytogenes HCC23] gi|217333510|gb|ACK39304.1| tRNA-binding domain protein [Listeria monocytogenes HCC23] gi|307571192|emb|CAR84371.1| tRNA-binding domain protein [Listeria monocytogenes L99] Length = 205 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F I V + E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVIGYVETKEKHPNADKLNVCKINVGD-EVLQIVCGAPNIDAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 V A G+ +P + +I+ +RG +S GM+C+ +EL + D IM L A +G Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIG 198 >gi|154687121|ref|YP_001422282.1| YtpR [Bacillus amyloliquefaciens FZB42] gi|154352972|gb|ABS75051.1| YtpR [Bacillus amyloliquefaciens FZB42] Length = 201 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 37/93 (39%), Positives = 59/93 (63%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D I +++ G+ + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGHVESKEKHPNADKLNICQVNVGE-ETLQIVCGAPNVDKGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +++ ++RG+ S+GM+CS KEL L D A Sbjct: 151 -SGLVIKDAELRGVPSSGMICSAKELALPDAPA 182 >gi|309810079|ref|ZP_07703925.1| tRNA binding domain protein [Lactobacillus iners SPIN 2503V10-D] gi|325911592|ref|ZP_08174000.1| tRNA binding domain protein [Lactobacillus iners UPII 143-D] gi|308169578|gb|EFO71625.1| tRNA binding domain protein [Lactobacillus iners SPIN 2503V10-D] gi|325476578|gb|EGC79736.1| tRNA binding domain protein [Lactobacillus iners UPII 143-D] Length = 214 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 72 LDILNDQLTKAGF-----DHKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQ 125 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 126 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 176 >gi|309808305|ref|ZP_07702211.1| tRNA binding domain protein [Lactobacillus iners LactinV 01V1-a] gi|308168452|gb|EFO70564.1| tRNA binding domain protein [Lactobacillus iners LactinV 01V1-a] Length = 214 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 72 LDILNDQLTKAGF-----DHKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-AEYQ 125 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 126 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 176 >gi|315653164|ref|ZP_07906089.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] gi|315489529|gb|EFU79166.1| phenylalanyl-tRNA synthetase beta subunit [Lactobacillus iners ATCC 55195] Length = 217 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 75 LDILNDQLTKAGF-----DHKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQ 128 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 129 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 179 >gi|27468333|ref|NP_764970.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus epidermidis ATCC 12228] gi|57867176|ref|YP_188874.1| hypothetical protein SERP1302 [Staphylococcus epidermidis RP62A] gi|251811125|ref|ZP_04825598.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis BCM-HMP0060] gi|282875839|ref|ZP_06284706.1| tRNA binding domain protein [Staphylococcus epidermidis SK135] gi|293366316|ref|ZP_06612996.1| tRNA-binding domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|27315879|gb|AAO05014.1|AE016748_248 phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus epidermidis ATCC 12228] gi|57637834|gb|AAW54622.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|251805345|gb|EES58002.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis BCM-HMP0060] gi|281294864|gb|EFA87391.1| tRNA binding domain protein [Staphylococcus epidermidis SK135] gi|291319554|gb|EFE59920.1| tRNA-binding domain protein [Staphylococcus epidermidis M23864:W2(grey)] gi|329725496|gb|EGG61976.1| tRNA binding domain protein [Staphylococcus epidermidis VCU144] gi|329737101|gb|EGG73355.1| tRNA binding domain protein [Staphylococcus epidermidis VCU028] gi|329737479|gb|EGG73732.1| tRNA binding domain protein [Staphylococcus epidermidis VCU045] Length = 198 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 +SP F + V + E++P+ D ++L ++ G +++Q+VCGAPNV G V A G+ +P Sbjct: 89 VSPKFVVGYVETKEKHPNADKLSVLNVNVGT-EKLQIVCGAPNVESGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ ++RG++S+GM+CS KEL L + IM L D +G Sbjct: 148 -SGMVIKDAQLRGVDSSGMICSMKELNLPNAPKEKGIMVLNDDYDIG 193 >gi|259501412|ref|ZP_05744314.1| tRNA binding domain protein [Lactobacillus iners DSM 13335] gi|259167161|gb|EEW51656.1| tRNA binding domain protein [Lactobacillus iners DSM 13335] Length = 217 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 75 LDILNDQLTKAGF-----DDKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQ 128 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 129 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 179 >gi|261402515|ref|YP_003246739.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus vulcanius M7] gi|261369508|gb|ACX72257.1| phenylalanyl-tRNA synthetase, beta subunit [Methanocaldococcus vulcanius M7] Length = 549 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 62/269 (23%), Positives = 115/269 (42%), Gaps = 52/269 (19%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYV 498 +K +V VP++R D+ + D+ EE+ YG ++ + P+ T E L+ + + ++ Sbjct: 317 NKIKVYVPAYRVDMFGEVDIAEEVAIAYGYNKFSGDYPIIGTIGE----LNKLEKKCDFI 372 Query: 499 KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLK 554 + ++ EV+N VLF + E +E+L P S + +R S+LP L++ Sbjct: 373 REIMIGFGFYEVINLML--SNDDVLFKKMRLEDNNYIEVLKPASIEHRIVRKSILPLLME 430 Query: 555 ATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCR 614 N + + IFE+ G + +E R R Sbjct: 431 TLRLNKHKELPQ-KIFEI---------------------------GDCVIIDKNAETRSR 462 Query: 615 FVD-----LFDAKADALSVIEPFVS--LDSLRFESGAPSWYHP----GRSGIIKTSAEIV 663 V + D + + + I+ +V L ++ + ++ H GR I +I+ Sbjct: 463 VVKKIAGVIIDNETN-FNEIKSYVEGLLREIKIDYELDNFEHHSFINGRCAKIIKDGKII 521 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GYFGE HP ++ F L P+ GFE+ ++ Sbjct: 522 -GYFGEIHPEVIINFELEFPVVGFELEIE 549 >gi|242243002|ref|ZP_04797447.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis W23144] gi|242233603|gb|EES35915.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus epidermidis W23144] Length = 198 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 +SP F + V + E++P+ D ++L ++ G +++Q+VCGAPNV G V A G+ +P Sbjct: 89 VSPKFVVGYVETKEKHPNADKLSVLNVNVGT-EKLQIVCGAPNVESGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ ++RG++S+GM+CS KEL L + IM L D +G Sbjct: 148 -SGMVIKDAQLRGVDSSGMICSMKELNLPNAPKEKGIMVLNDDYDIG 193 >gi|254167297|ref|ZP_04874149.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] gi|197623560|gb|EDY36123.1| phenylalanyl-tRNA synthetase, beta subunit [Aciduliprofundum boonei T469] Length = 535 Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 87/407 (21%), Positives = 158/407 (38%), Gaps = 79/407 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 +++ S G + S II G T ++ +++ Sbjct: 193 IILDSQGNVLSFPPIINGTLTQITHETRNIFIDIT------------------------- 227 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDI-CIARNITYKPRKIVFMNSEVKR-----LS 415 G DL + VL +I++ S G + + I + + K K+ + EV++ + Sbjct: 228 -GTDLNTLNSVL-NILACSFSDRGASIEKVEVIYPDKSIKTPKLEYTKIEVEKEYIAKIL 285 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G + E+ L L+R+ F V E +V+VP +R D+ D++E+I + ++ Sbjct: 286 GKKLGDEEILNSLQRMRFDVEIEDRSIKVTVPPYRMDILHPVDIIEDIAKGLTFQYFRAS 345 Query: 476 PLPLTQ-----VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS--VLFGGGQ 528 LP + ++D N+ V+ ++ + EV + S + + + Sbjct: 346 -LPTKEKIGSTIKDFENV---------VREIMLGLSFSEVTTLTITSPQIQCDAMRLPRK 395 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 +EI NPI+ D + +R+ L+P L++ +N R + IFE+ +V + E + Sbjct: 396 NFVEIENPITEDGTTLRSWLIPSLMEILRKNKHRELPQ-KIFEIGYVIKEKKEEHLALLY 454 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE-PFVSLDSLRFESGAPSW 647 I+ S KS DL + + + F+S Sbjct: 455 ---------IDSSASFTLSKSYAEAILRDLGIEEYEIREIEHNSFIS------------- 492 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 GR I EI G+FGE HP +L+ F L P E+ L I Sbjct: 493 ---GRVAGIYKDDEI--GFFGEIHPEVLENFELGYPTIAMELNLSKI 534 >gi|319401050|gb|EFV89269.1| phenylalanyl-tRNA synthetase beta chain domain protein [Staphylococcus epidermidis FRI909] Length = 198 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 39/107 (36%), Positives = 66/107 (61%), Gaps = 6/107 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 +SP F + V + E++P+ D ++L ++ G +++Q+VCGAPNV G V A G+ +P Sbjct: 89 VSPKFVVGYVETKEKHPNADKLSVLNVNVGT-EKLQIVCGAPNVESGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ ++RG++S+GM+CS KEL L + IM L D +G Sbjct: 148 -SGMVIKDAQLRGVDSSGMICSMKELNLPNAPKEKGIMVLNDDYDIG 193 >gi|239637936|ref|ZP_04678897.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus warneri L37603] gi|239596499|gb|EEQ79035.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus warneri L37603] Length = 200 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 91 LSPKFVVGYVETKEKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEQGQKVVVAKVGAVMP 149 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 150 -SGMVIKDAELRGVASSGMICSMKELNLPN 178 >gi|326692719|ref|ZP_08229724.1| TRNA-binding domain-containing protein [Leuconostoc argentinum KCTC 3773] Length = 218 Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats. Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 12/143 (8%) Query: 12 LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIV--KVLSVERNPDLD-CAILRIDTG 68 LD D ++++ L G E +R A+SP +V +V + +PD D + G Sbjct: 67 LDAD-QVDQVNGLLAEAGFE-----DRLAVSPSKLVIGRVEKMTAHPDSDHLHVTTTAVG 120 Query: 69 KHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML-- 126 + +Q+V G+PN+R G+ V A PG+ +P +I + +RG++S+GM+ S +EL L Sbjct: 121 DGKTLQIVSGSPNMREGIKVVVAQPGTMMPSGALIWD-GALRGVQSSGMIVSGRELKLPA 179 Query: 127 SDDSASIMELPIDAPVGGRLSDY 149 + D + LP D G + D+ Sbjct: 180 APDKPGALVLPEDFGEVGTVFDF 202 >gi|269986468|gb|EEZ92753.1| tRNA synthetase B5 [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 547 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 90/420 (21%), Positives = 170/420 (40%), Gaps = 69/420 (16%) Query: 292 NQEYDLSPDNVVIASDGRIQSIA--GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKN 349 N+ +L P ++ D + IA II ++NTT++ V++ D + K Sbjct: 178 NEYKNLIPKKPIVWLDNKNNIIAMPPIINADKYSINENTTELFVDITGTDKETVNAVTKI 237 Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 L Y F+ G + V+K + I+ N + K Sbjct: 238 L------IYNFQ----FLGKVSVIKL-----------KYKNKSISTNFSMSSHKFYLNED 276 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 +K L GI + + + +IL +L + V + P +RQD+ + D++++I+R +G+ Sbjct: 277 SIKSLLGIKISKDLAEKILSKLDYRVKSVGKDLLIEPPFYRQDIMHQVDIIDDIMRSFGI 336 Query: 470 DQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV-VNWSFISKEQ-SVLFGG 526 + I ++ P T+ + +N + ++ ++ L E+ +N K Q + F Sbjct: 337 NNIPETAPNLYTEGDFLQNHYVLEN----LRETLVGFGYQEIDINTLTNEKYQFTNTFIK 392 Query: 527 GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD--FAIFEVSHVYENDTPEGQ 584 G+ + +L S D++ L P LL+ N+ + F++ EV + E+D Sbjct: 393 GEDYVSLLQLKSGDVTMASKYLFPELLRLISNNLHKKFPQKVFSLSEVPELGESDVK--- 449 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA 644 + S +L E+ D+ LS+I+ +S DS ++ + Sbjct: 450 -------------FKNSLKLSVVSCEKDSNITDI-------LSIIKKLLS-DSFMIKNIS 488 Query: 645 PSWY----------HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + H G + +I EI G GE HP +L+ F + PI E+ +DS Sbjct: 489 TRYVSDKYSKTFISHRGYT-VIADGKEI--GIAGEVHPRVLNLFSIELPISVAEISIDSF 545 >gi|312870940|ref|ZP_07731045.1| tRNA binding domain protein [Lactobacillus iners LEAF 3008A-a] gi|329919663|ref|ZP_08276641.1| tRNA binding domain protein [Lactobacillus iners SPIN 1401G] gi|311093630|gb|EFQ51969.1| tRNA binding domain protein [Lactobacillus iners LEAF 3008A-a] gi|328937315|gb|EGG33739.1| tRNA binding domain protein [Lactobacillus iners SPIN 1401G] Length = 217 Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 63/112 (56%), Gaps = 10/112 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQ 74 L+ + D LT G D++ L T+V V + E +PD D + I+ G E Q Sbjct: 75 LDILNDQLTKAGF-----DHKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-AEYQ 128 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +VCGAPN++ G V A PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 129 IVCGAPNIQQGQKVVVALPGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 179 >gi|308174672|ref|YP_003921377.1| hypothetical protein BAMF_2781 [Bacillus amyloliquefaciens DSM 7] gi|307607536|emb|CBI43907.1| putative protein with RNA binding domain [Bacillus amyloliquefaciens DSM 7] gi|328554602|gb|AEB25094.1| protein with RNA binding domain [Bacillus amyloliquefaciens TA208] gi|328913008|gb|AEB64604.1| putative protein with RNA binding domain [Bacillus amyloliquefaciens LL3] Length = 201 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D I +++ G+ + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGHVESKEKHPNADKLNICQVNVGE-ETLQIVCGAPNVDKGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ ++RG+ S+GM+CS KEL L D Sbjct: 151 -SGLVIKDAELRGVPSSGMICSAKELALPD 179 >gi|296242038|ref|YP_003649525.1| phenylalanyl-tRNA synthetase subunit beta [Thermosphaera aggregans DSM 11486] gi|296094622|gb|ADG90573.1| phenylalanyl-tRNA synthetase beta subunit [Thermosphaera aggregans DSM 11486] Length = 556 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 90/398 (22%), Positives = 161/398 (40%), Gaps = 46/398 (11%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S G+I S+A I+ G+ + D T ++L+ D +I++ + + E Sbjct: 193 VLVDSTGQILSLAPIVNGETSKVDVRTRNILI-----DSTSISKETAISLVTIMALNIAE 247 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 R G++ V++ + + + I N+ E+ L G + Sbjct: 248 RSS--SGIVEVVEVVAPNGEKIISPSIEAQVIELNV-----------EEINELLGTQLKA 294 Query: 422 EDSLRILERLGFSVIGEYDK-FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 ++ +L+ + +I K +V +P +R DV+ D+ E++ G + +E L Sbjct: 295 DEIAELLKYHYYEIIENSGKSLKVRIPLFRLDVKSWVDVAEDVSISLGYHVLGTEADSLP 354 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVL--FGGGQRELEILNPIS 538 + ++ +R ++ VL EV N+ +S E + L FG + NP S Sbjct: 355 PSTHPGRVHPIEAFSRKMRDVLIGMGYTEVSNY-IMSNELAQLERFGLKSHMYLVSNPKS 413 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 + +R L PGLL A N + A IFE+ V + G +G + Sbjct: 414 ERFTGLRVWLTPGLLDAVAENSSKQ-AVIKIFEIGDV-----------ILPGRTEGEPVV 461 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW--YHPGRSGII 656 E RL + S ++ D LS+I ++++E + + R I Sbjct: 462 ER--RLGAAISHDKATL-------TDGLSLIASIFDFLNIKYEFVKDRYEGFLEERFSSI 512 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E V G+ GE HP IL G+ NP+ EV L + Sbjct: 513 YVDEEKV-GFVGEIHPKILYELGIGNPVIIAEVSLSKL 549 >gi|255030669|ref|ZP_05302620.1| hypothetical protein LmonL_19028 [Listeria monocytogenes LO28] Length = 193 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D + +I+ G + +Q+VCGAPN+ VG V A G+ +P Sbjct: 94 LSPKFVVGYVESKEKHPNADKLNVCKINVG-DKVLQIVCGAPNIDVGQKVVVAKIGAVMP 152 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +I+ +RG +S GM+C+ +EL + D Sbjct: 153 -SGLIIKPSNLRGEDSFGMVCAARELAIPD 181 >gi|16080034|ref|NP_390860.1| hypothetical protein BSU29820 [Bacillus subtilis subsp. subtilis str. 168] gi|221310924|ref|ZP_03592771.1| hypothetical protein Bsubs1_16266 [Bacillus subtilis subsp. subtilis str. 168] gi|221315251|ref|ZP_03597056.1| hypothetical protein BsubsN3_16172 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320168|ref|ZP_03601462.1| hypothetical protein BsubsJ_16083 [Bacillus subtilis subsp. subtilis str. JH642] gi|221324450|ref|ZP_03605744.1| hypothetical protein BsubsS_16232 [Bacillus subtilis subsp. subtilis str. SMY] gi|321312520|ref|YP_004204807.1| putative protein with RNA binding domain [Bacillus subtilis BSn5] gi|81637622|sp|O34943|YTPR_BACSU RecName: Full=Putative tRNA-binding protein ytpR; AltName: Full=Partial phenylalanyl-tRNA synthetase; Short=Partial PheRS; Short=pFRS gi|2293213|gb|AAC00291.1| YtpR [Bacillus subtilis] gi|2635466|emb|CAB14960.1| putative protein with RNA binding domain [Bacillus subtilis subsp. subtilis str. 168] gi|291485414|dbj|BAI86489.1| hypothetical protein BSNT_04344 [Bacillus subtilis subsp. natto BEST195] gi|320018794|gb|ADV93780.1| putative protein with RNA binding domain [Bacillus subtilis BSn5] Length = 201 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/93 (38%), Positives = 60/93 (64%), Gaps = 4/93 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V S E++P+ D ++ +++ G+ + +Q+VCGAPNV G V A G+ +P Sbjct: 92 LSPKFVVGYVESKEKHPNADKLSVCKVNVGE-ETLQIVCGAPNVDQGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA 131 + +++ ++RG+ S+GM+CS KEL L D A Sbjct: 151 -SGLVIKDAELRGVPSSGMICSAKELDLPDAPA 182 >gi|323339599|ref|ZP_08079873.1| tRNA-binding domain protein [Lactobacillus ruminis ATCC 25644] gi|323092994|gb|EFZ35592.1| tRNA-binding domain protein [Lactobacillus ruminis ATCC 25644] Length = 215 Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 7/88 (7%) Query: 44 FTIVKVLSVERNPD---LDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 F + V E +PD L +++D + +Q+VCGAPN+ G V A G+ +P+ Sbjct: 98 FVVGYVEKSEEHPDSDHLHVTSIKVDD---EHLQIVCGAPNIEQGQNVVIAKVGAMMPDG 154 Query: 101 NMIVNVRKIRGIESTGMMCSEKELMLSD 128 +I K+RGI+S GM+CS +EL L + Sbjct: 155 TLIFP-GKLRGIDSFGMVCSARELQLPN 181 >gi|301320986|gb|ADK69629.1| tRNA binding domain protein [Mycoplasma mycoides subsp. mycoides SC str. Gladysdale] Length = 202 Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K + +Q++CGA N R ++ V A S +P I Sbjct: 89 FVIGRIIECEAIEGTHLNICQVDI-KSEVLQIICGASNARKKVVCVVATLNSWLPNGQQI 147 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 V KIR + S GM+CS KEL + +D I+EL Sbjct: 148 VQ-SKIRDVGSFGMLCSYKELNIENDQQGIIEL 179 >gi|289616390|emb|CBI56917.1| unnamed protein product [Sordaria macrospora] Length = 609 Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 88/316 (27%), Positives = 133/316 (42%), Gaps = 34/316 (10%) Query: 407 MNSEVKRLS---GIDVPIEDSLRILERLGFSVI--GEYDKF-EVSVPSWRQDVEEKADLV 460 M+ EV L+ G+ E ++L ++ ++ + E DK +VSVP R DV D+V Sbjct: 299 MDVEVDYLNQCCGLQESPEALCKLLGKMAYTAVPDKENDKLIKVSVPPTRADVLHACDVV 358 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 R Q LP Q L + V+ A +EV+ S E+ Sbjct: 359 YGRCRHRLRLQQPPAHLP-NQASTIGKPLLINKVSDIVRNECAMAGWIEVMPLILCSHEE 417 Query: 521 SVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + GQ +++ NP S + +RTSLLPGLLK N + I EV+ + Sbjct: 418 NFEWLNRVDDGQTAIKLANPKSVEYQVVRTSLLPGLLKTLRENKSVRLP-LKITEVADIA 476 Query: 576 YENDTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV----DLFDAKADAL 626 +++T E +++ AA +SG E G L S R FV DL D Sbjct: 477 LKDETKERKARNERHFAAAFYGKTSGFEVVHGLLDRILSMLRVSFVTHEEDLHGKSVDFK 536 Query: 627 SVIEPFVSLDSLRF--ESGAPSWYHPGRSGII------KTSAEIVLGYFGEFHPNILDFF 678 V P + F E P+++ GR+ I KT +G FG HP++L+ F Sbjct: 537 VVENPSEEKGNGYFIKEIDEPTFFQ-GRAAAIYLRLGGKTKR---VGEFGVLHPSVLEKF 592 Query: 679 GLSNPICGFEVYLDSI 694 L P+ EV L+ Sbjct: 593 DLRYPVSVLEVNLEEF 608 >gi|259503624|ref|ZP_05746526.1| tRNA binding domain protein [Lactobacillus antri DSM 16041] gi|259168398|gb|EEW52893.1| tRNA binding domain protein [Lactobacillus antri DSM 16041] Length = 215 Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats. Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V +E +P D + + G Q +Q+VCG+PNV G+ V A PG+ +P+ + Sbjct: 98 FVVGYVEKMEDHPKSDHLKVTQTRIGADQTVQIVCGSPNVATGIKVVVARPGAMMPDGKL 157 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDY 149 I + G+ES GM+C +EL + + D + +P D G D+ Sbjct: 158 IWP-GALMGVESDGMLCGFRELRMKNAPDKKGLWIIPDDWQEVGEAVDF 205 >gi|199599427|ref|ZP_03212821.1| EMAP domain [Lactobacillus rhamnosus HN001] gi|199589680|gb|EDY97792.1| EMAP domain [Lactobacillus rhamnosus HN001] Length = 212 Score = 54.7 bits (130), Expect = 7e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V A PG+ +P+ Sbjct: 96 FVIGKIVDFKDHPDSDHLHVTQVDIGDEQ-VQIVCGAPNAALGQTVVVALPGAMMPDGK- 153 Query: 103 IVNVRKIRGIESTGMMCSEKELML 126 I+ +RG+ S GM+ S +EL + Sbjct: 154 IIWPGSLRGVASYGMISSARELAI 177 >gi|19115354|ref|NP_594442.1| phenylalanine-tRNA ligase beta subunit Frs1 (predicted) [Schizosaccharomyces pombe 972h-] gi|12229964|sp|O42849|SYFB_SCHPO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|2879800|emb|CAA16986.1| phenylalanine-tRNA ligase beta subunit Frs1 (predicted) [Schizosaccharomyces pombe] Length = 589 Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 66/292 (22%), Positives = 127/292 (43%), Gaps = 33/292 (11%) Query: 416 GIDVPIEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G+ +P ++ +L R+ + + V VP R D+ + D++E++ YG D + Sbjct: 307 GLSLPEDEICHLLTRMMLTAKPNPNDSKTLLVYVPPLRADILHQCDIMEDLGIAYGYDNL 366 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF---GGGQR 529 K P V + + + ++ +A EV+ + S +++ + + Sbjct: 367 KHT-YPAHSVTFGKPFEVNR-LADIIRNEVAYAGWSEVMPFILCSHDENYAWLRKTDDSK 424 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND-----TPEGQ 584 +++ NP + + +R+SLLPG+LK N + A+ IFEVS V D + Sbjct: 425 AVQLANPKTLEFQVVRSSLLPGILKTVRENKNHALP-IKIFEVSDVAFCDYSRERMTRNE 483 Query: 585 KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRF--ES 642 +++ A +SG E L R + + + K ++ P S D++ + E+ Sbjct: 484 RHLCAIFAGLNSGFEQIHGLLD-------RVMLMLNTK----RIMNPKDS-DAVGYWIEA 531 Query: 643 GAPSWYHPGRSGIIKT-----SAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 S + PGR + +A I +G FG HP +L+ F L++ E+ Sbjct: 532 EDDSTFFPGRCAAVYYRKDFGTAGIRVGVFGVLHPLVLEKFELTSAASAVEI 583 >gi|288904328|ref|YP_003429549.1| tRNA binding domain protein [Streptococcus gallolyticus UCN34] gi|306830358|ref|ZP_07463528.1| tRNA binding domain protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977322|ref|YP_004287038.1| Phenylalanyl-tRNA synthetase subunit beta [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731053|emb|CBI12597.1| putative tRNA binding domain protein [Streptococcus gallolyticus UCN34] gi|304427383|gb|EFM30485.1| tRNA binding domain protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177250|emb|CBZ47294.1| Phenylalanyl-tRNA synthetase beta chain [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 208 Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + ++ + +PD D I ++ + +Q+V GAPN VGL + A PG+ +P ++ Sbjct: 96 FVVGQIKEMVAHPDSDHLNICQVQISDDKTVQIVAGAPNAAVGLKTIVALPGAMMPNGSL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 I +RG +S GMMCS +EL L + I+EL A VG Sbjct: 156 IFP-GALRGEKSFGMMCSPRELALPNAPQKRGIIELDDTAVVG 197 >gi|258508766|ref|YP_003171517.1| tRNA binding domain-containing protein [Lactobacillus rhamnosus GG] gi|257148693|emb|CAR87666.1| tRNA binding domain protein [Lactobacillus rhamnosus GG] gi|259650072|dbj|BAI42234.1| conserved hypothetical protein [Lactobacillus rhamnosus GG] Length = 212 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I K++ + +PD D + ++D G Q +Q+VCGAPN +G V A PG+ +P+ Sbjct: 96 FVIGKIVDFKDHPDSDHLHVTQVDIGDEQ-VQIVCGAPNAALGQTVVVALPGAMMPDGK- 153 Query: 103 IVNVRKIRGIESTGMMCSEKELML 126 I+ +RG+ S GM+ S +EL + Sbjct: 154 IIWPGSLRGVASYGMISSARELAI 177 >gi|227513550|ref|ZP_03943599.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus buchneri ATCC 11577] gi|227524693|ref|ZP_03954742.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus hilgardii ATCC 8290] gi|227083423|gb|EEI18735.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus buchneri ATCC 11577] gi|227088177|gb|EEI23489.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus hilgardii ATCC 8290] Length = 213 Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 63/114 (55%), Gaps = 4/114 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVE-RNPDLDCAILRIDTGKHQE 72 T+ ++K+ LT+ G + + EA VK ++ R+ L +D G QE Sbjct: 70 TEGQVQKLNQFLTAHGFPGDLKADEEARFVVGYVKTMTDHPRSDHLKITTTEVDNG--QE 127 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +Q+V G+PN++ + V A G+ +P N +I+ ++RG+ES GM+CS +EL + Sbjct: 128 LQIVSGSPNMQASIKVVVAKIGAMMP-NGLIIWPGELRGVESDGMICSGRELQI 180 >gi|42561214|ref|NP_975665.1| phenylalanine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] gi|42492712|emb|CAE77307.1| phenylalanine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str. PG1] Length = 210 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F I +++ E I ++D K + +Q++CGA N R ++ V A S +P I Sbjct: 97 FVIGRIIECEAIEGTHLNICQVDI-KSEVLQIICGASNARKKVVCVVATLNSWLPNGQQI 155 Query: 104 VNVRKIRGIESTGMMCSEKELMLSDDSASIMEL 136 V KIR + S GM+CS KEL + +D I+EL Sbjct: 156 VQ-SKIRDVGSFGMLCSYKELNIENDQQGIIEL 187 >gi|284801999|ref|YP_003413864.1| hypothetical protein LM5578_1754 [Listeria monocytogenes 08-5578] gi|284995141|ref|YP_003416909.1| hypothetical protein LM5923_1706 [Listeria monocytogenes 08-5923] gi|284057561|gb|ADB68502.1| hypothetical protein LM5578_1754 [Listeria monocytogenes 08-5578] gi|284060608|gb|ADB71547.1| hypothetical protein LM5923_1706 [Listeria monocytogenes 08-5923] Length = 205 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V + E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVVGYVEAKEKHPNADKLNVCKINVGD-EVLQIVCGAPNIDAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 V A G+ +P + +I+ +RG +S GM+C+ +EL + D IM L A +G Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIG 198 >gi|254828159|ref|ZP_05232846.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL N3-165] gi|258600545|gb|EEW13870.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL N3-165] Length = 205 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V + E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVVGYVEAKEKHPNADKLNVCKINVGD-EVLQIVCGAPNIDAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 V A G+ +P + +I+ +RG +S GM+C+ +EL + D IM L A +G Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIG 198 >gi|320586693|gb|EFW99363.1| phenylalanyl-tRNA beta subunit [Grosmannia clavigera kw1407] Length = 1182 Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 43/296 (14%) Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIY 467 + + G++ E R+L+++ FS + D VSVP R D+ D+VE++ Y Sbjct: 664 HINEVCGLNESPEALGRLLKKVTFSSVPSADGTVLHVSVPPTRADILHPCDIVEDVAVAY 723 Query: 468 GVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 G + + PLP+ ++ D V+ A +EV+ S Sbjct: 724 GFNNLPRSSPNKAATIGRPLPINKLAD------------IVRLEAAMAGWIEVMPLILCS 771 Query: 518 KEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 +++ + GQ + + NP +A+ +RTSLLPGLLK N + I EVS Sbjct: 772 HDENFAWLNRRDDGQTAVRLANPKTAEYQVVRTSLLPGLLKTIRENKSVPL-PIMINEVS 830 Query: 574 HVYEND-----TPEGQKYMAAGIRKGSSGIEG-SGRLWSDKSEERCRFVDLFDAKADALS 627 V D +++ AA S+G E G L RC F+ + Sbjct: 831 DVTIKDESVERKARNERHWAAAYSSRSAGFEQVHGLLDRVMLMLRCAFLTREEGLTSGSG 890 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKT---SAEIVLGYFGEFHPNILDFFGL 680 LD + PGR+ I +G G HP +L+ + L Sbjct: 891 -----AGLDGYFIREIDDPTFFPGRAAAIYVRIGGESKRIGELGVLHPTVLEAYDL 941 >gi|289434887|ref|YP_003464759.1| tRNA binding domain protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171131|emb|CBH27673.1| tRNA binding domain protein, putative [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 205 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 67/117 (57%), Gaps = 7/117 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + K+ + G E E V + LSP F + V S E++P+ D + +I+ G+ + Sbjct: 70 TEELVAKMNQVIEKAGFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCQINVGE-E 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S GM+C+ +EL + + Sbjct: 126 VLQIVCGAPNIEAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPN 181 >gi|283770820|ref|ZP_06343712.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus H19] gi|283460967|gb|EFC08057.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus H19] Length = 198 Score = 54.3 bits (129), Expect = 8e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|284024789|ref|ZP_06379187.1| hypothetical protein Saura13_09360 [Staphylococcus aureus subsp. aureus 132] Length = 198 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|257425855|ref|ZP_05602279.1| phenylalanine-tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257428522|ref|ZP_05604920.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431155|ref|ZP_05607532.1| phenylalanine-tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257433837|ref|ZP_05610195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257436754|ref|ZP_05612798.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus M876] gi|282909053|ref|ZP_06316871.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282914536|ref|ZP_06322322.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus M899] gi|282924882|ref|ZP_06332548.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus C101] gi|283958490|ref|ZP_06375941.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293503614|ref|ZP_06667461.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|293510630|ref|ZP_06669335.1| tRNA-binding protein ytpR [Staphylococcus aureus subsp. aureus M809] gi|293537171|ref|ZP_06671851.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus M1015] gi|257271549|gb|EEV03695.1| phenylalanine-tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus 55/2053] gi|257275363|gb|EEV06850.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278103|gb|EEV08751.1| phenylalanine-tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus 68-397] gi|257281930|gb|EEV12067.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257284105|gb|EEV14228.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus M876] gi|282313248|gb|EFB43644.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus C101] gi|282321717|gb|EFB52042.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus M899] gi|282327317|gb|EFB57612.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|283471008|emb|CAQ50219.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ST398] gi|283790639|gb|EFC29456.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290920016|gb|EFD97084.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus M1015] gi|291095280|gb|EFE25545.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus 58-424] gi|291466521|gb|EFF09042.1| tRNA-binding protein ytpR [Staphylococcus aureus subsp. aureus M809] gi|298695010|gb|ADI98232.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus ED133] gi|302333406|gb|ADL23599.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus JKD6159] gi|315195648|gb|EFU26035.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus subsp. aureus CGS00] gi|323439604|gb|EGA97324.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus O11] gi|323441518|gb|EGA99170.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus O46] Length = 198 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|49483982|ref|YP_041206.1| hypothetical protein SAR1820 [Staphylococcus aureus subsp. aureus MRSA252] gi|282904311|ref|ZP_06312199.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus C160] gi|282906136|ref|ZP_06313991.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282911367|ref|ZP_06319169.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282919504|ref|ZP_06327239.1| hypothetical protein SASG_00810 [Staphylococcus aureus subsp. aureus C427] gi|295428312|ref|ZP_06820941.1| hypothetical protein SIAG_01636 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590725|ref|ZP_06949363.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus MN8] gi|49242111|emb|CAG40811.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|282317314|gb|EFB47688.1| hypothetical protein SASG_00810 [Staphylococcus aureus subsp. aureus C427] gi|282325062|gb|EFB55372.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282331428|gb|EFB60942.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282595929|gb|EFC00893.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus C160] gi|295127712|gb|EFG57349.1| hypothetical protein SIAG_01636 [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575611|gb|EFH94327.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus MN8] gi|312437802|gb|ADQ76873.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 212 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 103 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 161 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 162 -SGMVIKDAELRGVASSGMICSMKELNLPN 190 >gi|330684051|gb|EGG95807.1| tRNA binding domain protein [Staphylococcus epidermidis VCU121] Length = 200 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 91 LSPKFVVGYVETKEKHPDADKLSVLNVNVG-NDTLQIVCGAPNVDQGQKVVVAKVGAVMP 149 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 150 -SGMVIKDAELRGVASSGMICSMKELNLPN 178 >gi|47094077|ref|ZP_00231804.1| tRNA-binding domain protein [Listeria monocytogenes str. 4b H7858] gi|226224208|ref|YP_002758315.1| phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes Clip81459] gi|254852229|ref|ZP_05241577.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL R2-503] gi|254931546|ref|ZP_05264905.1| tRNA-binding domain-containing protein [Listeria monocytogenes HPB2262] gi|254994007|ref|ZP_05276197.1| phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes FSL J2-064] gi|300766116|ref|ZP_07076083.1| tRNA-binding domain protein [Listeria monocytogenes FSL N1-017] gi|47017553|gb|EAL08359.1| tRNA-binding domain protein [Listeria monocytogenes str. 4b H7858] gi|225876670|emb|CAS05379.1| Putative phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258605537|gb|EEW18145.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL R2-503] gi|293583101|gb|EFF95133.1| tRNA-binding domain-containing protein [Listeria monocytogenes HPB2262] gi|300513197|gb|EFK40277.1| tRNA-binding domain protein [Listeria monocytogenes FSL N1-017] gi|328464972|gb|EGF36251.1| phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes 1816] gi|328474837|gb|EGF45641.1| phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes 220] gi|332312048|gb|EGJ25143.1| tRNA binding domain protein [Listeria monocytogenes str. Scott A] Length = 205 Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + ++ + G E E V + LSP F + V S E++P+ D + +I+ G + Sbjct: 70 TEELVAQMNQVIEKAGFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCKINVG-DE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S GM+C+ +EL + D Sbjct: 126 VLQIVCGAPNIDAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPT 184 Query: 130 SASIMELPIDAPVG 143 IM L A VG Sbjct: 185 EKGIMVLEESAVVG 198 >gi|254824333|ref|ZP_05229334.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL J1-194] gi|255521125|ref|ZP_05388362.1| phenylalanyl-tRNA synthetase (beta subunit) [Listeria monocytogenes FSL J1-175] gi|293593567|gb|EFG01328.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL J1-194] Length = 205 Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + ++ + G E E V + LSP F + V S E++P+ D + +I+ G + Sbjct: 70 TEELVAQMNQVIEKAGFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCKINVG-DE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S GM+C+ +EL + D Sbjct: 126 VLQIVCGAPNIDAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPT 184 Query: 130 SASIMELPIDAPVG 143 IM L A VG Sbjct: 185 EKGIMVLEESAVVG 198 >gi|221141547|ref|ZP_03566040.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751568|gb|ADL65745.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 198 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|15924732|ref|NP_372266.1| phenylalanyl-tRNA synthetase-like protein [Staphylococcus aureus subsp. aureus Mu50] gi|15927319|ref|NP_374852.1| hypothetical protein SA1563 [Staphylococcus aureus subsp. aureus N315] gi|21283414|ref|NP_646502.1| hypothetical protein MW1685 [Staphylococcus aureus subsp. aureus MW2] gi|49486567|ref|YP_043788.1| hypothetical protein SAS1668 [Staphylococcus aureus subsp. aureus MSSA476] gi|57652040|ref|YP_186625.1| hypothetical protein SACOL1792 [Staphylococcus aureus subsp. aureus COL] gi|87161400|ref|YP_494382.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195556|ref|YP_500362.1| hypothetical protein SAOUHSC_01858 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268220|ref|YP_001247163.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150394288|ref|YP_001316963.1| tRNA-binding domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|151221847|ref|YP_001332669.1| hypothetical protein NWMN_1635 [Staphylococcus aureus subsp. aureus str. Newman] gi|156980059|ref|YP_001442318.1| phenylalanyl-tRNA synthetase-like protein [Staphylococcus aureus subsp. aureus Mu3] gi|161509959|ref|YP_001575618.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253315884|ref|ZP_04839097.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732392|ref|ZP_04866557.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253734474|ref|ZP_04868639.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus TCH130] gi|255006528|ref|ZP_05145129.2| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus Mu50-omega] gi|257794125|ref|ZP_05643104.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9781] gi|258415829|ref|ZP_05682100.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9763] gi|258420658|ref|ZP_05683597.1| tRNA-binding domain-containing protein [Staphylococcus aureus A9719] gi|258438308|ref|ZP_05689592.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9299] gi|258443766|ref|ZP_05692105.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258445977|ref|ZP_05694153.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A6300] gi|258448296|ref|ZP_05696423.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A6224] gi|258452293|ref|ZP_05700306.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|258454177|ref|ZP_05702148.1| tRNA-binding domain-containing protein [Staphylococcus aureus A5937] gi|262049051|ref|ZP_06021929.1| hypothetical protein SAD30_2256 [Staphylococcus aureus D30] gi|262051817|ref|ZP_06024034.1| hypothetical protein SA930_0479 [Staphylococcus aureus 930918-3] gi|269203380|ref|YP_003282649.1| hypothetical protein SAAV_1752 [Staphylococcus aureus subsp. aureus ED98] gi|282893236|ref|ZP_06301470.1| hypothetical protein SGAG_00590 [Staphylococcus aureus A8117] gi|282925629|ref|ZP_06333278.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282927871|ref|ZP_06335482.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|294849903|ref|ZP_06790642.1| hypothetical protein SKAG_01991 [Staphylococcus aureus A9754] gi|295406053|ref|ZP_06815861.1| hypothetical protein SMAG_01210 [Staphylococcus aureus A8819] gi|296276766|ref|ZP_06859273.1| hypothetical protein SauraMR_10464 [Staphylococcus aureus subsp. aureus MR1] gi|297207544|ref|ZP_06923980.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245022|ref|ZP_06928899.1| hypothetical protein SLAG_01116 [Staphylococcus aureus A8796] gi|300911627|ref|ZP_07129071.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|304380663|ref|ZP_07363334.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|13701537|dbj|BAB42831.1| SA1563 [Staphylococcus aureus subsp. aureus N315] gi|14247514|dbj|BAB57904.1| phenylalanyl-tRNA synthetase homolog [Staphylococcus aureus subsp. aureus Mu50] gi|21204855|dbj|BAB95550.1| MW1685 [Staphylococcus aureus subsp. aureus MW2] gi|49245010|emb|CAG43471.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286226|gb|AAW38320.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|87127374|gb|ABD21888.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203114|gb|ABD30924.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741289|gb|ABQ49587.1| t-RNA-binding domain protein [Staphylococcus aureus subsp. aureus JH9] gi|149946740|gb|ABR52676.1| t-RNA-binding domain protein [Staphylococcus aureus subsp. aureus JH1] gi|150374647|dbj|BAF67907.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|156722194|dbj|BAF78611.1| phenylalanyl-tRNA synthetase homolog [Staphylococcus aureus subsp. aureus Mu3] gi|160368768|gb|ABX29739.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253723914|gb|EES92643.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253727528|gb|EES96257.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus TCH130] gi|257788097|gb|EEV26437.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9781] gi|257839422|gb|EEV63895.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9763] gi|257843262|gb|EEV67672.1| tRNA-binding domain-containing protein [Staphylococcus aureus A9719] gi|257848352|gb|EEV72343.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9299] gi|257851172|gb|EEV75115.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257855219|gb|EEV78158.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A6300] gi|257858535|gb|EEV81411.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A6224] gi|257860018|gb|EEV82853.1| conserved hypothetical protein [Staphylococcus aureus A5948] gi|257863629|gb|EEV86386.1| tRNA-binding domain-containing protein [Staphylococcus aureus A5937] gi|259160311|gb|EEW45338.1| hypothetical protein SA930_0479 [Staphylococcus aureus 930918-3] gi|259162868|gb|EEW47432.1| hypothetical protein SAD30_2256 [Staphylococcus aureus D30] gi|262075670|gb|ACY11643.1| hypothetical protein SAAV_1752 [Staphylococcus aureus subsp. aureus ED98] gi|269941220|emb|CBI49608.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TW20] gi|282590381|gb|EFB95460.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282592409|gb|EFB97423.1| conserved hypothetical protein [Staphylococcus aureus A9765] gi|282764554|gb|EFC04680.1| hypothetical protein SGAG_00590 [Staphylococcus aureus A8117] gi|285817424|gb|ADC37911.1| phenylalanyl-tRNA synthetase (beta subunit) [Staphylococcus aureus 04-02981] gi|294823242|gb|EFG39672.1| hypothetical protein SKAG_01991 [Staphylococcus aureus A9754] gi|294969050|gb|EFG45071.1| hypothetical protein SMAG_01210 [Staphylococcus aureus A8819] gi|296887880|gb|EFH26777.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297178102|gb|EFH37350.1| hypothetical protein SLAG_01116 [Staphylococcus aureus A8796] gi|300887048|gb|EFK82249.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|304340770|gb|EFM06699.1| tRNA-binding domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830120|emb|CBX34962.1| putative tRNA binding domain protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315130619|gb|EFT86605.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus CGS03] gi|315197211|gb|EFU27550.1| phenylalanine--tRNA ligase beta subunit [Staphylococcus aureus subsp. aureus CGS01] gi|320141685|gb|EFW33520.1| tRNA binding domain protein [Staphylococcus aureus subsp. aureus MRSA131] gi|320143770|gb|EFW35544.1| tRNA binding domain protein [Staphylococcus aureus subsp. aureus MRSA177] gi|329726969|gb|EGG63426.1| tRNA binding domain protein [Staphylococcus aureus subsp. aureus 21189] gi|329727614|gb|EGG64070.1| tRNA binding domain protein [Staphylococcus aureus subsp. aureus 21172] gi|329733085|gb|EGG69422.1| tRNA binding domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 198 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|295693403|ref|YP_003602013.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus ST1] gi|295031509|emb|CBL50988.1| Phenylalanyl-tRNA synthetase [Lactobacillus crispatus ST1] Length = 215 Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + ++ +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVEVADGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGAQIWPG 158 Query: 108 KIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVGGRL 146 ++RG++S GM+CS +EL L + IM +P VG Sbjct: 159 ELRGVDSYGMICSARELGLPHAPQKRGIMVVPDSFEVGAEF 199 >gi|329314416|gb|AEB88829.1| T-RNA-binding domain protein [Staphylococcus aureus subsp. aureus T0131] Length = 198 Score = 54.3 bits (129), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|256843671|ref|ZP_05549159.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|293380422|ref|ZP_06626491.1| tRNA binding domain protein [Lactobacillus crispatus 214-1] gi|312984122|ref|ZP_07791469.1| tRNA binding domain protein [Lactobacillus crispatus CTV-05] gi|256615091|gb|EEU20292.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN] gi|290923001|gb|EFD99934.1| tRNA binding domain protein [Lactobacillus crispatus 214-1] gi|310894476|gb|EFQ43551.1| tRNA binding domain protein [Lactobacillus crispatus CTV-05] Length = 215 Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + ++ +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVEVADGEEHQIVCGAPNIAQGQKVVVALPGTLMP-NGAQIWPG 158 Query: 108 KIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVGGRL 146 ++RG++S GM+CS +EL L + IM +P VG Sbjct: 159 ELRGVDSYGMICSARELGLPHAPQKRGIMVVPDSFEVGAEF 199 >gi|82751331|ref|YP_417072.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus RF122] gi|82656862|emb|CAI81291.1| phenylalanyl-tRNA synthetase beta subunit [Staphylococcus aureus RF122] Length = 198 Score = 53.9 bits (128), Expect = 9e-05, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|258424156|ref|ZP_05687038.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9635] gi|257845777|gb|EEV69809.1| phenylalanyl-tRNA synthetase [Staphylococcus aureus A9635] Length = 198 Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + +++PD D ++L ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 89 LSPKFVVGYVETKDKHPDADKLSVLNVNVG-NDTLQIVCGAPNVEAGQKVVVAKVGAVMP 147 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 148 -SGMVIKDAELRGVASSGMICSMKELNLPN 176 >gi|306832604|ref|ZP_07465743.1| tRNA binding domain protein [Streptococcus bovis ATCC 700338] gi|304425212|gb|EFM28339.1| tRNA binding domain protein [Streptococcus bovis ATCC 700338] Length = 208 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 6/133 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 +D + + LT G E+++N E F + ++ + +PD D I ++ + Sbjct: 68 SDQDVATLNAELTKEGFS-EQLEN-EPSPKFVVGQIKEMVAHPDSDHLNICQVQISDDKI 125 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+V GAPN VGL + A PG+ +P ++I +RG +S GMMCS +EL L + Sbjct: 126 VQIVAGAPNAAVGLKTIVALPGAMMPNGSLIFP-GALRGEKSFGMMCSPRELALPNAPQK 184 Query: 131 ASIMELPIDAPVG 143 I+EL A VG Sbjct: 185 RGIIELDDTALVG 197 >gi|290893200|ref|ZP_06556187.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL J2-071] gi|290557182|gb|EFD90709.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL J2-071] Length = 205 Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats. Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%) Query: 29 GLEVEKVDNREALSPFTIVKVLSV-ERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP +V + V E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVVGYVEVKEKHPNADKLNVCKINVGD-EVLQIVCGAPNIDAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 V A G+ +P + +I+ +RG +S GM+C+ +EL + D IM L A +G Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESATIG 198 >gi|227878132|ref|ZP_03996111.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus crispatus JV-V01] gi|256850139|ref|ZP_05555569.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|262047702|ref|ZP_06020655.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] gi|227862259|gb|EEJ69799.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus crispatus JV-V01] gi|256713111|gb|EEU28102.1| phenylalanyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US] gi|260571987|gb|EEX28554.1| phenylalanyl-tRNA synthetase, beta subunit [Lactobacillus crispatus MV-3A-US] Length = 215 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%) Query: 49 VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVR 107 V + E +PD D + ++ +E Q+VCGAPN+ G V A PG+ +P N + Sbjct: 100 VKTCEPHPDSDHLHVTTVEVADGEEPQIVCGAPNIAQGQKVVVALPGTLMP-NGAQIWPG 158 Query: 108 KIRGIESTGMMCSEKELML--SDDSASIMELPIDAPVGGRL 146 ++RG++S GM+CS +EL L + IM +P VG Sbjct: 159 ELRGVDSYGMICSARELGLPHAPQKRGIMVVPDSFEVGAEF 199 >gi|195444260|ref|XP_002069786.1| GK11710 [Drosophila willistoni] gi|194165871|gb|EDW80772.1| GK11710 [Drosophila willistoni] Length = 589 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 63/270 (23%), Positives = 104/270 (38%), Gaps = 35/270 (12%) Query: 427 ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKR 486 +L R+ + D V +P R DV D+ E+I YG + IK Q+ + Sbjct: 330 MLTRMYLEAKVQGDFLTVKIPPTRHDVIHACDIYEDIAIAYGYNNIKKSLPAFMQIAKQF 389 Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE-------QSVLFGGGQRELEILNPISA 539 L+ T ++ +A E + ++ S++ +S+ + I NP + Sbjct: 390 PLN---KLTEQLREQVAQAGFTEALTFTLCSRDDIARKLNKSI---DSMSVVHIGNPKTL 443 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 + +RT+LLPGLLK N + +FE+S V D K G Sbjct: 444 EFQVVRTTLLPGLLKTLVANRKMPLP-LKLFEISDVVLAD------------EKTEVGAR 490 Query: 600 GSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLR---FESGAPSWYHPGRS 653 RL + + F L D LSV P+ + + + ++ Y PGR Sbjct: 491 NERRLCAVNCNKTAGFEVVHGLLDRVMQLLSV--PWKTGNVTKGYSLQAADDPSYFPGRC 548 Query: 654 GIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + + +G G HP +L F L+ P Sbjct: 549 ANVMYD-NVAIGKIGVLHPTVLQAFELTTP 577 >gi|14601981|ref|NP_148526.1| phenylalanyl-tRNA synthetase subunit beta [Aeropyrum pernix K1] gi|12644593|sp|Q9Y9I3|SYFB_AERPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|5106006|dbj|BAA81317.1| phenylalanyl-tRNA synthetase beta chain [Aeropyrum pernix K1] Length = 548 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 29/284 (10%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V + G+D+ E++ L R+ + V VP +R D+ + DLVE+I G + Sbjct: 283 VSKALGVDLTPEEAALHLRRMRHNASPAGGLVNVRVPPFRVDILGEVDLVEDIAISIGYE 342 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE 530 + +L + R VK +L EV+ S G Sbjct: 343 ALGPR---WPGKFHGGSLRWETHVYRAVKDLLVGLGFTEVLQLVLTSPRLVEAAGFSSMA 399 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VY-ENDTPEGQKYMA 588 +E+LNP+ + S +R +LL LL+ N R +FE + VY E+ P ++ +A Sbjct: 400 VEVLNPVQQEYSVLRPTLLITLLQTLRENQHRR-KPVKVFEAGNAVYLEDGEPRDEEKLA 458 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 G+ +G E D +A +V+ + +D E + + Sbjct: 459 LGVLDEEAGFE--------------------DVQAPLYAVLR-IMGVD-FEVEEASHPMF 496 Query: 649 HPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 GR+ +K E LGY GE P +L+ FGL P+ E+ L+ Sbjct: 497 MEGRTAAVKVGGE-RLGYIGEVKPEVLEAFGLEYPVAAAEISLE 539 >gi|328947181|ref|YP_004364518.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema succinifaciens DSM 2489] gi|328447505|gb|AEB13221.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema succinifaciens DSM 2489] Length = 765 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 76/317 (23%), Positives = 130/317 (41%), Gaps = 52/317 (16%) Query: 406 FMNSEVKRLSGIDVPIEDSLR------ILERLG--FSVIGEYDK--FEVSVPSWRQDVEE 455 F + RLS I+ + SL L R+G V+ E + F V +R D Sbjct: 295 FQQTTKARLSAINKKLGSSLSEDEVKDALVRMGSKVDVLNENGETVFVVHPAPYRNDFLH 354 Query: 456 KADLVEEILRIYGVDQIKSEP---------LPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 + D++E+++ G+D K E LP+T +R VK ++A Sbjct: 355 EVDVIEDVMIGKGLDFFKPEKPNDFTIGRLLPIT------------VYSRKVKNIMAGIG 402 Query: 507 MMEVVNWSFISKEQSVLFGG--GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E++ SK+ + G G+ +EI NP+S + +R S++ L +A ++ A+ Sbjct: 403 YQEMIFNYLGSKKTYIDNMGIDGKNVIEIANPMSENYQFIRPSIIASLFEAEAQS-GNAV 461 Query: 565 ADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKAD 624 IFEV + D E G+ I+ G L + + F+ A Sbjct: 462 YPHKIFEVGKIAFIDETE---------NTGTKTIQSLGFLTASNNAN-------FNEAAS 505 Query: 625 ALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 +S I ++ E+ P + PGR I + + G FGE HP IL+ + + P Sbjct: 506 EVSTILYYLDHKYEVHETNDPRFI-PGRQAGIMVNGKQA-GIFGEIHPQILENWQVGVPC 563 Query: 685 CGFEVYLDSIPISQKKR 701 E+ L+ + ++ K Sbjct: 564 VAGEIDLEYLMATEPKE 580 >gi|219851232|ref|YP_002465664.1| phenylalanyl-tRNA synthetase subunit beta [Methanosphaerula palustris E1-9c] gi|254781810|sp|B8GEX4|SYFB_METPE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|219545491|gb|ACL15941.1| phenylalanyl-tRNA synthetase, beta subunit [Methanosphaerula palustris E1-9c] Length = 546 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 82/346 (23%), Positives = 142/346 (41%), Gaps = 39/346 (11%) Query: 367 QGMIPVLKHIVSLILSLCGGTASDICI--ARNITYKPRKIVFMNSEVKRLSGIDVPIEDS 424 Q + V IV L GGT + I + P E +L G+ + + Sbjct: 232 QRAVEVTVKIVCAALVEAGGTVESVTIDGVESPDLSPSVRTVSVDEGNKLLGLSLTAPEM 291 Query: 425 LRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 +LE++ F + D+ V VP +R D+ D+ E++ YG + + + + Sbjct: 292 ATLLEKMRFKATPDGTDRIRVEVPCYRADIMHDWDIFEDVAVAYGYENFDATLPETSTIG 351 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPIS 538 ++ +S+ V+ +L EV+ ++ S ++V + QRE L +L+PI+ Sbjct: 352 EQSQVSVIGGA---VREILTGLGYHEVMPFTLTS--ETVTYDLMQRERSPTALHLLHPIT 406 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 D + +RT LLP LL+ N R + IF V E + QK A + Sbjct: 407 EDQTIVRTDLLPLLLELLQMNRYRELPQ-RIFCTGDVVEGISTH-QKAAAVSCHGAADFS 464 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 E ++ CR ++L P+ + ES P++ GR G I Sbjct: 465 EAYA-----AADALCRDLNL------------PYTTA-----ESTDPAFID-GRRGDIIV 501 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKT 704 V G FGE P ++ F L +PI E+ L ++ + +R ++ Sbjct: 502 DGTTV-GVFGEISPRVILGFELDHPIAAVELDLRAVRAHRDQRDRS 546 >gi|290974401|ref|XP_002669934.1| predicted protein [Naegleria gruberi] gi|284083487|gb|EFC37190.1| predicted protein [Naegleria gruberi] Length = 593 Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 90/408 (22%), Positives = 161/408 (39%), Gaps = 52/408 (12%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ + R+ S+ II G H+ +T +V +E D + A+ N + S + Sbjct: 218 VILDAKRRVLSLPPIINGDHSKIKMSTKNVFIECTATD-LTKAKVVLNTVVTMFSEH--- 273 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASD-ICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 +P V ++ + + I N+ + ++NS + G+++ Sbjct: 274 ------CSVPFTVEQVEIVYEDKTQSKDEPTPILDNVEFTTNS-DYINSRI----GLNLS 322 Query: 421 IEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 + IL ++ + + + ++ V P R DV D++E++ +G + I P Sbjct: 323 AQQIAEILTKMQLNATVTQNNELRVLAPPTRSDVLHACDIMEDVAIAHGYNNIPIT-FPK 381 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILN 535 + K N Q S V+ LA EV++ + E++ + G+ + + Sbjct: 382 SSTVGKENELNQLSEM--VRLELAMSGYTEVLSLILCNDEENFKYMNRVNDGKTAIAVAE 439 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAG 590 P + R SL+PGLLK N + +FE V D + + +AA Sbjct: 440 PCPFEFKTARISLIPGLLKTLQSNKSLPLP-IKLFECGDVILVDDSKDVGAKNNRRLAAL 498 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV---IEPFVSLDSLRFESGAPS- 646 +SG+E L D + L+V +E S+D F S PS Sbjct: 499 FSSATSGLE--------------LIHGLVDRVMEVLAVPFEVEHSQSVDKHCF-SIFPSN 543 Query: 647 --WYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 + PGR I + + G FG HP + FGL P+ FE+ L+ Sbjct: 544 DISFLPGRQADIFYKGKKI-GIFGIIHPEVASNFGLKTPVSVFEIELE 590 >gi|300706630|ref|XP_002995564.1| hypothetical protein NCER_101490 [Nosema ceranae BRL01] gi|263511572|sp|C4VA52|SYFB_NOSCE RecName: Full=Probable phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|239604723|gb|EEQ81893.1| hypothetical protein NCER_101490 [Nosema ceranae BRL01] Length = 504 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/293 (24%), Positives = 120/293 (40%), Gaps = 38/293 (12%) Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 G+ + +DN Y V + + G I S+ +I NTT++LVEV N Sbjct: 185 GKYLQYVDNDNYI-----VFMDAKGHILSVPPVINSNRTKISVNTTNILVEVT---GTNT 236 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK 403 + L +I S +R + + +I + I+ + K + Sbjct: 237 YKVNTCLKMIL-SAFRTDNMCQV-NIISDKQEILEI--------------------KDKS 274 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSV-IGEYDKFEVSVPSWRQDVEEKADLVEE 462 + EV + I++ + D +L ++ + I + V+VPS RQDV KADL+E+ Sbjct: 275 YLLSIDEVYKELNINISVIDLSDLLIKMMYKTNIIDDKHLNVTVPSVRQDVLHKADLIED 334 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 I YG + I + + + L+ + R +L EV +SK ++ Sbjct: 335 IAICYGFNNINMVMPDINTIGSENRLNKFSDKLRLEMCML---GFTEVYTMVLVSKSDNI 391 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + N S + +R+SL PGL+KA N+ I IFEV V Sbjct: 392 F---GDNSAVVSNYKSLECEAVRSSLYPGLMKAVSSNLHCKIP-IKIFEVGDV 440 >gi|325913362|ref|ZP_08175729.1| tRNA binding domain protein [Lactobacillus iners UPII 60-B] gi|325477288|gb|EGC80433.1| tRNA binding domain protein [Lactobacillus iners UPII 60-B] Length = 214 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%) Query: 36 DNREALSPFTIVK--VLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAP 92 D++ L T+V V + E +PD D + I+ G E Q+VCGAPN++ G V A Sbjct: 85 DDKLELGKPTLVYGFVKTCEPHPDSDHLHVTTINVGD-DEYQIVCGAPNIQQGQKVVVAL 143 Query: 93 PGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 PG+ +P N + ++RG++S+GM+CS +EL L Sbjct: 144 PGTLMP-NGQQIWPGELRGVKSSGMICSARELGL 176 >gi|116873039|ref|YP_849820.1| tRNA-binding domain-containing protein [Listeria welshimeri serovar 6b str. SLCC5334] gi|116741917|emb|CAK21041.1| tRNA-binding domain protein [Listeria welshimeri serovar 6b str. SLCC5334] Length = 205 Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats. Identities = 36/102 (35%), Positives = 61/102 (59%), Gaps = 7/102 (6%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V S E++P+ D + +I+ G+ + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LSPKFVVGYVESKEKHPNADKLNVCQINVGE-EVLQIVCGAPNIEAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 V A G+ +P + +I+ +RG +S GM+C+ +EL + + Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPN 181 >gi|159107586|ref|XP_001704071.1| Phenylalanyl-tRNA synthetase beta chain [Giardia lamblia ATCC 50803] gi|157432121|gb|EDO76397.1| Phenylalanyl-tRNA synthetase beta chain [Giardia lamblia ATCC 50803] Length = 589 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 28/251 (11%) Query: 446 VPSWRQDVEEKADLVEEILRIYGVDQI--KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 VP +RQD+ +ADLVE YG + I K LP T + LQ+ R + R A Sbjct: 363 VPFFRQDIIAEADLVENFCISYGYNAIAEKYAKLPNTMTQGS---ILQEFRLGEIVRSEA 419 Query: 504 -SRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 + +E+V +S E S+ G +E+ N +A S+ R+ L PGLL+A Sbjct: 420 VACGYIELVLFSLCPAEDSIF---GDLPVELSNTKTAMFSHTRSCLAPGLLRAVSAQQHI 476 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD-LFDA 621 ++ +FEVS V + ++K S G+ +D E F+D L Sbjct: 477 SLP-LRLFEVSEVLVPNADARDDVGVHAVKKFSCIYGGT----TDGFEFVHGFLDHLMRK 531 Query: 622 KADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 A + +I P+ PGR I LG+ G HPN L + + Sbjct: 532 LAKSFKLI-----------GEDHPTCL-PGRRASIVVDGH-TLGWIGVIHPNTLLTYKVP 578 Query: 682 NPICGFEVYLD 692 P E +L+ Sbjct: 579 IPCTIMEFFLN 589 >gi|326422527|gb|EGD71923.1| tRNA synthetase B5 [Candidatus Parvarchaeum acidophilus ARMAN-5_'5-way FS'] Length = 549 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 32/301 (10%) Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 K V VK + G V RIL+ + +SV V P +RQD+ + D+++ Sbjct: 269 HKFVLSEDSVKSVLGCHVSANQIARILKCMDYSVKVSGKDIAVEPPFYRQDIMHQVDIID 328 Query: 462 EILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 +++R GV+ I S P T+ NL S +K V+ +E ++ + ++ E+ Sbjct: 329 DVMRSIGVENIPSITPHSYTE---GGNLQDHYSINN-IKEVMLGFGYLE-IDINTLTNER 383 Query: 521 SVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 FG G+ +++ S +++ ++ P LL+ N+ + IF +S V Sbjct: 384 -YQFGDTYIKGENYASLMHLKSGEVTMASKNIFPELLRLISNNLHKKFPQ-NIFSLSDV- 440 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 I G S RL + ++ LS + F SLD Sbjct: 441 ------------VVIGGSEVGFNNSKRLSIVSCSKDVNVTEILSIVKKVLS--DSF-SLD 485 Query: 637 SLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +L+ + + PGR G + +G+ GE HP +L+ FG+ PI E+Y+ Sbjct: 486 NLKTKYNGEELSKTFIPGR-GYDLFIGKNKIGFAGEVHPRVLNSFGIELPIAIAEIYIGD 544 Query: 694 I 694 I Sbjct: 545 I 545 >gi|126459188|ref|YP_001055466.1| phenylalanyl-tRNA synthetase subunit beta [Pyrobaculum calidifontis JCM 11548] gi|126248909|gb|ABO08000.1| phenylalanyl-tRNA synthetase beta subunit [Pyrobaculum calidifontis JCM 11548] Length = 515 Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 94/421 (22%), Positives = 160/421 (38%), Gaps = 92/421 (21%) Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G K L N+E +P +V A+ G+I + ++G + + T VL++V Sbjct: 176 QGRKYSQLINRE---NPPALVDAA-GQIMVVVPVLGSECCKITEKTRAVLIDVT------ 225 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPR 402 G DLQ + + ++ ++ +I N TY R Sbjct: 226 --------------------GTDLQAVSNAMSVLIYALIERGRSKEVEIVEGGN-TYVHR 264 Query: 403 --KIVFMNSEVKRLSGIDVPIEDSLRIL--ERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 +I +V+ L G+ + E+ R L RLG Y+ E P +R ++ D Sbjct: 265 YTRIKVSKEDVENLLGMRMRQEEFERYLGKARLG------YEAGEAVAPPYRINMLSWVD 318 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 + EE+ + G + + E P+ + + T +++ L + EV N+ S Sbjct: 319 VAEEVAIVLGYNNLPLETPPIFTAGRRHKTEIF---TEELRKTLLAMGFAEVNNYVLTSG 375 Query: 519 EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + + +LNPIS +R S++P L+ AT R + +FEV V Sbjct: 376 VVTTFC----KPATVLNPISELYDTVRCSIIPQLI-ATAALTRR--KEVKLFEVGDV--- 425 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK-----ADALSVIEPFV 633 +R+G + R + L ++ D LSV++ Sbjct: 426 ------------VREGRTR----------------RTLTLLISREGATLTDGLSVVKTLC 457 Query: 634 SLDSLRFESG--APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 L L E G A W P RS ++ E GY E +P IL G + P E+++ Sbjct: 458 RLHGLTCEIGPTAAEWALPNRSAAVRGDVE---GYVAEVNPQILISLGYTVPTVVAELFV 514 Query: 692 D 692 D Sbjct: 515 D 515 >gi|313608531|gb|EFR84424.1| tRNA-binding domain-containing protein [Listeria monocytogenes FSL F2-208] Length = 205 Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 72/134 (53%), Gaps = 9/134 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + ++ + G E E V + LSP F + V + E++P+ D + +I+ G + Sbjct: 70 TEELVSQMNQVIEKAGFEPEIVAD---LSPKFVVGYVEAKEKHPNADKLNVCKINVG-DE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--D 129 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S GM+C+ +EL + D Sbjct: 126 VLQIVCGAPNIDAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPDAPT 184 Query: 130 SASIMELPIDAPVG 143 IM L A +G Sbjct: 185 EKGIMVLEESATIG 198 >gi|299822721|ref|ZP_07054607.1| tRNA-binding domain protein [Listeria grayi DSM 20601] gi|299816250|gb|EFI83488.1| tRNA-binding domain protein [Listeria grayi DSM 20601] Length = 205 Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 71/127 (55%), Gaps = 6/127 (4%) Query: 6 SWLKDHLDTDVSL-EKICDTLTSIGLEVEKVDNREA-LSP-FTIVKVLSVERNPDLD-CA 61 S+ K D V L EK+ L + + D E LSP F + V E++P+ D + Sbjct: 57 SFFKAEKDGPVELTEKLVAELNEVIRKAGFEDELEVDLSPKFVVGYVAEKEKHPNADKLS 116 Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 I ++ G+ +E+Q+VCGAPNV G V A G+ +P + +++ +RG++S GM+C+ Sbjct: 117 ICKVAVGE-EELQIVCGAPNVEAGQKVVVAKVGAVMP-SGLVIKPSNLRGVDSFGMLCAA 174 Query: 122 KELMLSD 128 +EL + + Sbjct: 175 RELAIPN 181 >gi|238879655|gb|EEQ43293.1| phenylalanyl-tRNA synthetase beta chain [Candida albicans WO-1] Length = 592 Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 99/470 (21%), Positives = 189/470 (40%), Gaps = 97/470 (20%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 P + + + NR D + + GIA L LG N S I L IK + + Sbjct: 50 PQLKIEVPANRYDMLCIEGIAQAL-NEFLGNTSAPNYKLSPSKPEISLTIK---ESTYPI 105 Query: 215 KGFAMCCVK--------------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 + +A + +++ + N R R L A+G + L Sbjct: 106 RQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLT--------- 156 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 P ++A D+ L + +GE+++ ++ ++ SP V+ Sbjct: 157 ---PPFTYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLD 213 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II H+ NT +V ++V D L + SRY E + Sbjct: 214 ANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRTKTEIVINQL-VAMFSRYCKE-PFE 271 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIED 423 ++ + + +H + +C NIT + K I ++NS V G+D E+ Sbjct: 272 IEPVQIISEH----------NNETRVC--PNITPRTAKAEISYINSCV----GLDYSGEE 315 Query: 424 SLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L+++ E D +V +P R D+ + D++E++ YG D +K Sbjct: 316 ISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPKAE 375 Query: 474 ---SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----G 525 + PLP+ +V D + R+ +S+A +EV+ + S +++ + Sbjct: 376 SLVAAPLPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDENFAWLKQKD 422 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + +++ NP + + +RT+LLPG+LK N ++ +FE + Sbjct: 423 DGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLP-IKVFECGDI 471 >gi|2792023|emb|CAA73166.1| phenylalanyl-tRNA synthetase [Candida albicans] Length = 593 Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 99/471 (21%), Positives = 190/471 (40%), Gaps = 98/471 (20%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 P + + + NR D + + GIA L LG N S I L IK + + Sbjct: 50 PQLKIEVPANRYDMLCIEGIAQAL-NEFLGNTSAPNYKLSPSKPEISLTIK---ESTYPI 105 Query: 215 KGFAMCCVK--------------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 + +A + +++ + N R R L A+G + +L Sbjct: 106 RQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDSLT--------- 156 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 P ++A D+ L + +GE+++ ++ ++ SP V+ Sbjct: 157 ---PPFTYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLD 213 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II H+ NT +V ++V D L + SRY E + Sbjct: 214 ANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRTKTEIVINQL-VAMFSRYCKE-PFE 271 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIED 423 ++ + + +H + +C NIT + K I ++NS V G+D E+ Sbjct: 272 IEPVQIISEH----------NNETRVC--PNITPRTAKAEISYINSCV----GLDYSGEE 315 Query: 424 SLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE----- 475 ++L+++ E D +V +P R D+ + D++E++ YG D +K + Sbjct: 316 ISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKDQTLRS 375 Query: 476 ------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF---- 524 PLP+ +V D + R+ +S+A +EV+ + S +++ + Sbjct: 376 KVFSCCPLPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDENFAWLKQK 422 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + +++ NP + + +RT+LLPG+LK N ++ +FE + Sbjct: 423 DDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLP-IKVFECGDI 472 >gi|290558982|gb|EFD92364.1| tRNA synthetase B5 [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 547 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 32/301 (10%) Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 K V VK + G V RIL+ + +SV V P +RQD+ + D+++ Sbjct: 267 HKFVLSEDSVKSVLGCHVSANQIARILKCMDYSVKVSGKDIAVEPPFYRQDIMHQVDIID 326 Query: 462 EILRIYGVDQIKS-EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 +++R GV+ I S P T+ NL S +K V+ +E ++ + ++ E+ Sbjct: 327 DVMRSIGVENIPSITPHSYTE---GGNLQDHYSINN-IKEVMLGFGYLE-IDINTLTNER 381 Query: 521 SVLFG----GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 FG G+ +++ S +++ ++ P LL+ N+ + IF +S V Sbjct: 382 -YQFGDTYIKGENYASLMHLKSGEVTMASKNIFPELLRLISNNLHKKFPQ-NIFSLSDV- 438 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 I G S RL + ++ LS + F SLD Sbjct: 439 ------------VVIGGSEVGFNNSKRLSIVSCSKDVNVTEILSIVKKVLS--DSF-SLD 483 Query: 637 SLRFESGAPSW---YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +L+ + + PGR G + +G+ GE HP +L+ FG+ PI E+Y+ Sbjct: 484 NLKTKYNGEELSKTFIPGR-GYDLFIGKNKIGFAGEVHPRVLNSFGIELPIAIAEIYIGD 542 Query: 694 I 694 I Sbjct: 543 I 543 >gi|223933045|ref|ZP_03625038.1| t-RNA-binding domain protein [Streptococcus suis 89/1591] gi|330831991|ref|YP_004400816.1| t-RNA-binding domain-containing protein [Streptococcus suis ST3] gi|223898232|gb|EEF64600.1| t-RNA-binding domain protein [Streptococcus suis 89/1591] gi|329306214|gb|AEB80630.1| t-RNA-binding domain protein [Streptococcus suis ST3] Length = 207 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 10/132 (7%) Query: 23 DTLTSIGLEVEKVDNREAL----SP-FTIVKVLSVERNPD-LDCAILRIDTGKHQEIQVV 76 + + ++ E+ K E+L SP F + +++ + +PD I +++ G + +Q+V Sbjct: 70 EQVATLNAELAKEGFTESLVNDNSPKFVVGQIVELVPHPDSYHLNICQVNVGD-KTVQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA--SIM 134 GAPN GL + A PG+ +P ++I K+RG +S GMMCS +EL L + I+ Sbjct: 129 AGAPNAAQGLKTIVALPGAMMPSGSLIFP-GKLRGEDSFGMMCSPRELALPNAPQVRGII 187 Query: 135 ELPIDAPVGGRL 146 EL A VG L Sbjct: 188 ELDDSAVVGEAL 199 >gi|189234855|ref|XP_001813322.1| PREDICTED: similar to phenylalanyl-tRNA synthetase beta chain [Tribolium castaneum] Length = 320 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 28/260 (10%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 +V++P R D+ D+ E++ +G ++I LP T +N + S ++ + Sbjct: 76 KVTIPPTRHDIIHPCDIYEDVAIAFGYNKI-VRTLPKTNTIGSQNPINKLSD--LLRAPI 132 Query: 503 ASRAMMEVVNWSFISKEQ-SVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATG 557 A E + +S S++ S G + + I NP + + RT+L+PG+LK Sbjct: 133 AQAGFTEALTFSLCSRDDISTKLGLKSVDEVPAVHISNPKTLEFQVCRTTLIPGILKTIA 192 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 N + IFEVS V D G R+ + + F Sbjct: 193 ANKKMPLP-LKIFEVSDVVIKDP------------STEVGARNERRICAVNCNKNAGFEV 239 Query: 618 LFDAKADALSVIE----PFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFHP 672 + + ++E P + ++ S + PGR +I +EI G G HP Sbjct: 240 VHGLLDKIMMLLEVPWNPNKTPKGYYLQACEDSAFFPGRCAKVICDGSEI--GKIGVLHP 297 Query: 673 NILDFFGLSNPICGFEVYLD 692 N+L F L+NP E+ ++ Sbjct: 298 NVLHKFELTNPCSCVEINIE 317 >gi|302023227|ref|ZP_07248438.1| tRNA-binding protein [Streptococcus suis 05HAS68] Length = 207 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 10/132 (7%) Query: 23 DTLTSIGLEVEKVDNREAL----SP-FTIVKVLSVERNPD-LDCAILRIDTGKHQEIQVV 76 + + ++ E+ K E+L SP F + +++ + +PD I +++ G + +Q+V Sbjct: 70 EQVATLNAELAKEGFTESLVNDNSPKFVVGQIVELVPHPDSYHLNICQVNVGD-KTVQIV 128 Query: 77 CGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSA--SIM 134 GAPN GL + A PG+ +P ++I K+RG +S GMMCS +EL L + I+ Sbjct: 129 AGAPNAAQGLKTIVALPGAMMPSGSLIFP-GKLRGEDSFGMMCSPRELALPNAPQVRGII 187 Query: 135 ELPIDAPVGGRL 146 EL A VG L Sbjct: 188 ELDDSAVVGEAL 199 >gi|68475234|ref|XP_718335.1| hypothetical protein CaO19.10105 [Candida albicans SC5314] gi|68475433|ref|XP_718239.1| hypothetical protein CaO19.2573 [Candida albicans SC5314] gi|46439998|gb|EAK99309.1| hypothetical protein CaO19.2573 [Candida albicans SC5314] gi|46440098|gb|EAK99408.1| hypothetical protein CaO19.10105 [Candida albicans SC5314] Length = 592 Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 99/466 (21%), Positives = 188/466 (40%), Gaps = 97/466 (20%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 P + + + NR D + + GIA L LG N S I L IK + + Sbjct: 50 PQLKIEVPANRYDMLCIEGIAQAL-NEFLGNTSAPNYKLSPSKPEISLTIK---ESTYPI 105 Query: 215 KGFAMCCVK--------------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 + +A + +++ + N R R L A+G + L Sbjct: 106 RQYAASAILRNVKLDERAYDSFISLQDKLHANLCRNRTLVAIGTHDLDTLT--------- 156 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 P ++A D+ L + +GE+++ ++ ++ SP V+ Sbjct: 157 ---PPFTYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLD 213 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II H+ NT +V ++V D L + SRY E + Sbjct: 214 ANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRTKTEIVINQL-VAMFSRYCKE-PFE 271 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIED 423 ++ + + +H + +C NIT + K I ++NS V G+D E+ Sbjct: 272 IEPIQIISEH----------NNETRVC--PNITPRTAKAEISYINSCV----GLDYSGEE 315 Query: 424 SLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L+++ E D +V +P R D+ + D++E++ YG D +K Sbjct: 316 ISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPKAE 375 Query: 474 ---SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----G 525 + PLP+ +V D + R+ +S+A +EV+ + S +++ + Sbjct: 376 SLVAAPLPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDENFAWLKQKD 422 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 G + +++ NP + + +RT+LLPG+LK N ++ +FE Sbjct: 423 DGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLP-IKVFE 467 >gi|322778776|gb|EFZ09192.1| hypothetical protein SINV_04832 [Solenopsis invicta] Length = 592 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/269 (23%), Positives = 108/269 (40%), Gaps = 27/269 (10%) Query: 434 SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQS 493 S + + D + +P R DV D+ E+I YG ++I+ ++ + + L+ Sbjct: 338 SKVKDKDTLVIEIPPTRHDVIHACDIYEDIAIAYGYNEIEKTIPQISTIGAEFPLN---K 394 Query: 494 RTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLL 549 T ++ +A E + +S S+E G + E + I NP + + RTSLL Sbjct: 395 LTDLIRIEMAQAGFTEALTFSLCSREDVADKLGYKIEDVPAVHISNPKTLEFQVARTSLL 454 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKS 609 PGLLK N + +FEVS V D G + RL + + Sbjct: 455 PGLLKTIVANKKMPLPH-KLFEVSDVVLRDD------------MTEVGARNNRRLCAIYA 501 Query: 610 EERCRFVDLFDAKADALSVIE----PFVSLDSLRF--ESGAPSWYHPGRSGIIKTSAEIV 663 + F + L ++E P + +R+ + Y P R I + V Sbjct: 502 NKSAGFEIIHGLVDRVLLLLEVPWNPTEAEGCMRYYLRAADDPMYFPQRCAEI-VCYDKV 560 Query: 664 LGYFGEFHPNILDFFGLSNPICGFEVYLD 692 +G G HP++L F L+ P E+ ++ Sbjct: 561 IGKMGVLHPDVLSKFDLNIPCSAMEINIE 589 >gi|323488416|ref|ZP_08093663.1| phenylalanyl-tRNA synthetase beta chain [Planococcus donghaensis MPA1U2] gi|323397923|gb|EGA90722.1| phenylalanyl-tRNA synthetase beta chain [Planococcus donghaensis MPA1U2] Length = 203 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 5/107 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F + V + E++P+ D + ++ +++Q+VCGAPNV G V A G+ +P Sbjct: 91 FSPKFVVGFVEAKEKHPNADKLNVCQVVVSDEEKLQIVCGAPNVEQGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 + M++ ++RG+ S+GM+CS KEL L + + I+ L DA G Sbjct: 151 -SGMVIRDAELRGVASSGMICSAKELALPNAPEEKGILVLSEDAETG 196 >gi|255514061|gb|EET90324.1| phenylalanyl-tRNA synthetase, beta subunit [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 558 Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 70/294 (23%), Positives = 123/294 (41%), Gaps = 51/294 (17%) Query: 427 ILERLGFSVIG-EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK 485 +LE +G+SV E + V +R D D++E+I YG D I + VE+ Sbjct: 298 LLESMGYSVAKLEKESLMAEVQPYRLDCFSSQDVIEDIAIAYGYDSIGTH-----SVENA 352 Query: 486 RNLS--LQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ-----RELEILNPIS 538 + S L + + +L+ +E N+ +++ E++ G+ R +++ N + Sbjct: 353 GHGSPDLLEEFKNALGTLLSGFGFLEAYNY-YLTNEKTCFEMMGKDFDSRRVVKLKNSKT 411 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 S +R SLLPGLL + +FE+ HV+ Sbjct: 412 EAFSILRDSLLPGLLHDISTTGHERMPQ-RLFEIGHVFS--------------------- 449 Query: 599 EGSGRLWSDKSEERCRFVDLFD-AKADA---LSVIEPFVSLDSLRFESGA---PSWYHPG 651 L K E R + + +KA+A +S+ + + + + PS+ PG Sbjct: 450 -----LEQGKPLEATRLGLIIEHSKANASECISIAKSVLGYLGIGYSLAGKDMPSFI-PG 503 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTK 705 R + E + G GE HP++L+ F + P+ E+ LD I + + TKTK Sbjct: 504 RCASVVCGGEEI-GVLGEIHPSVLNNFRIEEPVVALEMDLDYI-MRSIRNTKTK 555 >gi|70727700|gb|AAZ07898.1| putative secreted protein [Streptococcus suis] Length = 176 Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 3/82 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + +++ + +PD D I +++ G + +Q+V GAPN GL + A PG+ +P ++ Sbjct: 96 FVVGQIVELVPHPDSDHLNICQVNVGD-KTVQIVAGAPNAAQGLKTIVALPGAMMPSGSL 154 Query: 103 IVNVRKIRGIESTGMMCSEKEL 124 I K+RG +S GMMCS +EL Sbjct: 155 IFP-GKLRGEDSFGMMCSPREL 175 >gi|226507078|ref|NP_001146904.1| LOC100280512 [Zea mays] gi|195604968|gb|ACG24314.1| phenylalanyl-tRNA synthetase beta chain [Zea mays] Length = 594 Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 113/275 (41%), Gaps = 28/275 (10%) Query: 428 LERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKR 486 L+ S+ GE + VSVP D+ DL E++ YG + + KS+P +T Sbjct: 339 LQAESHSLKGE-ARISVSVPPTGSDILHARDLSEDVAIAYGFNNVPKSKPKCMT------ 391 Query: 487 NLSLQQSRTRYVKRVLASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISA 539 + +Q R+ ++ A A MEV+ + S E++ + + I NP ++ Sbjct: 392 -IGGRQPLNRFSDKIRAEVARAGYMEVLTFILSSHEENFDMLNRTDDKSKAVIIANPRTS 450 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 + +RTSL+ LLK N+D IFEV V D+ G+S Sbjct: 451 EFEVVRTSLMSCLLKTLKHNIDHP-RPIKIFEVGDVVMLDSSRDV---------GASNNR 500 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 L+ ++ + L D+ + P V+ + + P R I TS Sbjct: 501 RLAALYCNRVSGFEEIMGLVDSIVKVVRA--PHVNFGENYYVPTDEPEFFPKRQCKIVTS 558 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 +GY G H +L FG+ +P E+ L+++ Sbjct: 559 DGKQVGYLGIVHAEVLRKFGIPDPCTFVEMDLEAL 593 >gi|146084635|ref|XP_001465062.1| phenylalanyl-tRNA synthetase [Leishmania infantum JPCM5] gi|134069158|emb|CAM67305.1| putative phenylalanyl-tRNA synthetase [Leishmania infantum JPCM5] Length = 633 Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 76/318 (23%), Positives = 127/318 (39%), Gaps = 53/318 (16%) Query: 407 MNSEVKRLSGIDVPIE-----DSLRILERLGFSVIGEYDKFEVSV--PSWRQDVEEKADL 459 M ++RL+ I + IE + ++L+++ ++ I E + EV+V P R DV AD+ Sbjct: 325 MTMSIERLNSI-IGIEMKSGAECAQLLKKMMYT-IKETTESEVTVTVPPMRTDVIGVADV 382 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL----ASRAMMEVVNWSF 515 +E++ YG D I VE K + + Q+ V ++L A E++ S Sbjct: 383 MEDVAIAYGYDNI-------AYVECKTHGPVTQTPLSKVAQLLRTEMACAGYTELLTLSL 435 Query: 516 ISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAI-------A 565 S+ + G I NP + + R SLLPG+LK N + + A Sbjct: 436 CSRADAFESLGRVDNDVAAHIANPQTMEFQVCRPSLLPGILKTLATNKSKPLPQRFFECA 495 Query: 566 DFA----------IFEVSHVYENDTPEGQKYMAAGIRKG-SSGIEGSGRLWSDKSEERCR 614 D + E+ Y + Q+++AA G SSG E L Sbjct: 496 DVVLLDNERNFPPVLELKADYASCGARNQRHLAAAHCNGSSSGFESIHGLTE-------- 547 Query: 615 FVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KTSAEIVLGYFGEFH 671 + L + + I D E G + PGR+ I + + +G+ G H Sbjct: 548 -LALLKLGVPSKAEIAEDYEGDYYTLEKGEDGAFFPGRAMDIILHRAGQAVRIGHLGVIH 606 Query: 672 PNILDFFGLSNPICGFEV 689 PN L + + +P E+ Sbjct: 607 PNTLKAYDIPSPCSYMEL 624 >gi|222151666|ref|YP_002560822.1| phenylalanyl-tRNA synthetase beta subunit homolog [Macrococcus caseolyticus JCSC5402] gi|222120791|dbj|BAH18126.1| phenylalanyl-tRNA synthetase beta subunit homolog [Macrococcus caseolyticus JCSC5402] Length = 198 Score = 52.8 bits (125), Expect = 3e-04, Method: Composition-based stats. Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V + E++PD D + +D G +++Q+VCGA N+ G V A G+ +P Sbjct: 87 LSPKFVVGYVETCEKHPDADKLNVTTVDVGT-EKLQIVCGAKNIAQGQKVVVAKVGAVMP 145 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 MI + ++RG+ S GM+CSE+EL L+D Sbjct: 146 SGMMIKDA-ELRGVPSKGMICSERELGLTD 174 >gi|110004034|emb|CAK98374.1| putative trna binding domain protein [Spiroplasma citri] Length = 209 Score = 52.4 bits (124), Expect = 3e-04, Method: Composition-based stats. Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%) Query: 23 DTLTSIGLEVEKVD----NREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVC 77 D L +G +++ D N F + K+L +++P+ D I ++D G E Q++C Sbjct: 71 DLLAELGTILKQEDYSFNNINQQPQFIVGKILERKKHPNSDKLNICQVDIGLSTE-QIIC 129 Query: 78 GAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 GA N + L V A G+ +P IV ++RG+ S GM+CSE+EL L Sbjct: 130 GADNCDIDQLVVVARVGAIMPSGLKIVP-SELRGVISNGMLCSERELGL 177 >gi|324507730|gb|ADY43272.1| Phenylalanyl-tRNA synthetase beta chain [Ascaris suum] Length = 589 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 83/410 (20%), Positives = 146/410 (35%), Gaps = 73/410 (17%) Query: 307 DGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDL 366 +G + S+ II G+H+ T ++ +E DL Sbjct: 226 NGIVLSLPPIINGEHSKIHLGTRNIFIEAT--------------------------ATDL 259 Query: 367 QGMIPVLKHIVSLILSLC-----------GGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + VL +V+L C + + Y+ K+ N + R Sbjct: 260 EKARIVLDTVVTLFSQYCEKPFTVEPVDVQNADGTVVQYPELKYRHEKVSVDN--INRNI 317 Query: 416 GIDVPIEDSLRILERLGFSVIGEYD--KFEVSVPSWRQDVEEKADLVEEILRIYGVDQI- 472 G+++ + +L R+ S D EV +P R D+ + D+ E++ +G ++I Sbjct: 318 GLNLMATEMAALLSRMSLSSFACSDGKTLEVVIPPTRHDILHECDIAEDVAIAFGFNRIV 377 Query: 473 KSEPLPLTQVEDKRNLSLQQSRTRYVKRV-LASRAMMEVVNWSFIS----KEQSVLFGGG 527 + P T E Q ++ + R +A+ E +N++ S + Sbjct: 378 RQFPREHTVAE-----PFQLNKLSELLRFDIAAAGWTEALNFALCSCDDISTKMRKANAL 432 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PE 582 ++I NP + + RTSLLPGL K N D + +FE+ V D Sbjct: 433 DSAVKIANPKTIEFQVARTSLLPGLFKTLASNRDMPLP-LKLFELQDVVLKDPSSEVGAR 491 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 ++ ++A + G E L R + L K E Sbjct: 492 NERRLSAVYYSKTPGFEIIHGLLD-------RVMQLLGVKWTK--------DGSGYYLEG 536 Query: 643 GAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y GR + +I LG G HP ++ FGL+ P+ FE+ ++ Sbjct: 537 KDDCSYLDGRCARVVGPGDIHLGTMGVVHPEVITAFGLTLPLSAFEITIE 586 >gi|322498497|emb|CBZ33570.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 633 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 44/274 (16%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL- 502 V+VP R DV AD++E++ YG D I VE K + + Q+ V ++L Sbjct: 367 VTVPPMRTDVIGVADVMEDVAIAYGYDNI-------AYVECKTHGPVTQTPLSKVAQLLR 419 Query: 503 ---ASRAMMEVVNWSFISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKAT 556 A E++ S S+ + G I NP + + R SLLPG+LK Sbjct: 420 TEMACAGYTELLTLSLCSRADAFESLGRVDNDVAAHIANPQTMEFQVCRPSLLPGILKTL 479 Query: 557 GRNVDRAI-------ADFA----------IFEVSHVYENDTPEGQKYMAAGIRKG-SSGI 598 N + + AD + E+ Y + Q+++AA G SSG Sbjct: 480 ATNKSKPLPQRFFECADVVLLDNERNFPPVLELKADYASCGARNQRHLAAAHCNGSSSGF 539 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII-- 656 E L + L + + I D E G + PGR+ I Sbjct: 540 ESIHGLTE---------LALLKLGVPSKAEIAEDYEGDYYTLEKGEDGAFFPGRAMDIIL 590 Query: 657 -KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 + + +G+ G HPN L + + +P E+ Sbjct: 591 HRAGQAVRIGHLGVIHPNTLKAYDIPSPCSYMEL 624 >gi|326514628|dbj|BAJ96301.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 614 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 21/169 (12%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 VSVP R DV DL E++ YG + + KS+P +T + +Q R+ ++ Sbjct: 354 VSVPPTRSDVLHARDLAEDVAIAYGYNNVPKSKPKSMT-------IGGRQPLNRFSDKIR 406 Query: 503 ASRA---MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKA 555 A A MEV+ + S E++ G + + I NP +++ +R+SL+ LLK Sbjct: 407 AEVARAGYMEVLTFVLTSHEENFDMLNRTDDGNKAVIIANPRTSEFEVLRSSLMSCLLKT 466 Query: 556 TGRNVDRAIADFAIFEVSHVYENDTPE-----GQKYMAAGIRKGSSGIE 599 N+D IFEV V DT + +AA +SG E Sbjct: 467 LKHNIDHP-RPIKIFEVGDVVSLDTSRDVGATNNRRLAALYCNNNSGFE 514 >gi|259148049|emb|CAY81298.1| Frs1p [Saccharomyces cerevisiae EC1118] gi|323347542|gb|EGA81810.1| Frs1p [Saccharomyces cerevisiae Lalvin QA23] Length = 595 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 171/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|323308093|gb|EGA61346.1| Frs1p [Saccharomyces cerevisiae FostersO] Length = 595 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 171/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|6323089|ref|NP_013161.1| Frs1p [Saccharomyces cerevisiae S288c] gi|1711628|sp|P15624|SYFB_YEAST RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1181281|emb|CAA64307.1| phenylalanyl-tRNA synthetase alpha subunit [Saccharomyces cerevisiae] gi|1360406|emb|CAA97591.1| FRS1 [Saccharomyces cerevisiae] gi|285813482|tpg|DAA09378.1| TPA: Frs1p [Saccharomyces cerevisiae S288c] Length = 595 Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 171/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|116198911|ref|XP_001225267.1| hypothetical protein CHGG_07611 [Chaetomium globosum CBS 148.51] gi|88178890|gb|EAQ86358.1| hypothetical protein CHGG_07611 [Chaetomium globosum CBS 148.51] Length = 566 Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 37/308 (12%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYG 468 + ++ G+ E ++L ++ S D +V+VP R DV D++E++ YG Sbjct: 267 LNQVCGLKESPESIAKLLSKMALSAEPLEDPKLLKVTVPPTRADVLHSCDVMEDVAIAYG 326 Query: 469 VDQIK----------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS 517 + + +PL + ++ D R+ S + +L S N+ +++ Sbjct: 327 FNDLPRSTPNRSVTIGKPLMINKLSDIVRHESAMAGWAEVMPLILCSHEE----NFEWLN 382 Query: 518 KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 ++ G +++ NP + + RTSLLPGLLK N + IFE S V Sbjct: 383 RKDD-----GTTAVKLANPKTVEYQIARTSLLPGLLKTLSENKAMRLP-LEIFEASDVVL 436 Query: 578 NDT-----PEGQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFV---DLFDAKADALSV 628 D +++ AA +SG E G L + R F+ + + K+ V Sbjct: 437 KDESLERRARNERHWAAAYYGKTSGFEIVHGLLDRVMTMLRVAFITHEEGLEGKSIDFEV 496 Query: 629 IEPFVSLDSLRF-ESGAPSWYHPGRSGII--KTSAEIV-LGYFGEFHPNILDFFGLSNPI 684 E D E P++++ GR+ I + ++ +G FG HP +L+ F L P+ Sbjct: 497 KENPSQQDGYFIKEIDEPTFFN-GRAAAIYVRLGGKLQRIGEFGVLHPTVLEKFDLRYPV 555 Query: 685 CGFEVYLD 692 E+ L+ Sbjct: 556 STLEINLE 563 >gi|170091048|ref|XP_001876746.1| predicted protein [Laccaria bicolor S238N-H82] gi|164648239|gb|EDR12482.1| predicted protein [Laccaria bicolor S238N-H82] Length = 623 Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 128/601 (21%), Positives = 228/601 (37%), Gaps = 111/601 (18%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDL-VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL 213 P + + + NR D + + GIA L V G + + P ES L + S + Sbjct: 56 PQLKIEVPANRYDLLCIEGIARALRVFLGKSEAPLYRLVYPPGGESALLTASISPETSKI 115 Query: 214 CKGFAMCCVKGVR-------------NNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 FA ++ V+ + + N R+R L A+G + L Y Sbjct: 116 RPLFACAILRNVKFTPRSYASFMDLQDKLHQNICRRRQLVAIGTHDLDTLTAPFRY---- 171 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIA- 305 +A D+ L R+ + E+++ + E L SP +I Sbjct: 172 --------EARAPKDIQFIPLGKDRSYTAEELMTVYESEKHLAKYLPIIRDSPVYPIIYD 223 Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD-SRYRFERGV 364 + R+ S+ II +H+ +T +V ++V A L I+ + F Sbjct: 224 AQDRVLSMPPIINSEHSKITLDTRNVFIDVT-------ATDQTKLDIVVNIVSTMFSEYC 276 Query: 365 DLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDS 424 + I +K ++S G + I+ NI+ + R S V +G+ + + Sbjct: 277 QVPYTIEPVK-----VVSANGQSH----ISPNISNQKRTA--HASYVNSCTGLSLTSSEV 325 Query: 425 LRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-------- 473 +L+R+ D+ V+VP+ R D+ + D++E+ YG + + Sbjct: 326 SALLQRMSLHASVSPTNLDEILVNVPAIRPDILHECDIMEDAAIAYGFNNLPDTFPSTNT 385 Query: 474 -SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQ 528 ++PL ++++ D V+ A +EV+ S E++ + G+ Sbjct: 386 VAQPLAISKLSD------------VVRVEWALAGWIEVLPLILCSHEENFEWLNHQDDGR 433 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDT-----PEG 583 ++I NP + + +RTSL+PGLLK N A+ IFE S V D Sbjct: 434 TAVKIANPKTLEFQVVRTSLIPGLLKTIRENRSHALP-IKIFETSDVVFKDVSRERQARN 492 Query: 584 QKYMAAGIRKGSSGIE----GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 +++ AA S+G E R+ R R D D + E + D + Sbjct: 493 ERHAAAVWCNKSAGFEIVHGMLDRVMKMLDIPRIRSED--DKSGTGYYIRE---ASDGMF 547 Query: 640 FESGAPS-WYHPGRSGIIKTSA-------EIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 F A + +Y P S S+ ++ +G G HP +L+ F + P E L Sbjct: 548 FPGRAATIYYRPNPSNCTGLSSVDEAVKGDVQIGRLGILHPLVLEKFEIGFPCSALEFTL 607 Query: 692 D 692 + Sbjct: 608 E 608 >gi|28378179|ref|NP_785071.1| hypothetical protein lp_1460 [Lactobacillus plantarum WCFS1] gi|28271014|emb|CAD63919.1| unknown [Lactobacillus plantarum WCFS1] Length = 213 Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V S E +P D I + + G Q +Q+V G+PN++ +L V A G+ +P + + Sbjct: 97 FVVGYVESAEAHPKSDHLQITKTNVGLEQPLQIVSGSPNMQANILVVVAKVGAMMP-SGL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPID-APVGG 144 I+ ++RG+ES GM+ S +EL L + + LP D PVG Sbjct: 156 IIWPGELRGVESDGMIVSGRELRLPNAPQRPGALILPADYQPVGA 200 >gi|260790865|ref|XP_002590461.1| hypothetical protein BRAFLDRAFT_124565 [Branchiostoma floridae] gi|229275655|gb|EEN46472.1| hypothetical protein BRAFLDRAFT_124565 [Branchiostoma floridae] Length = 521 Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 34/210 (16%) Query: 498 VKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELE------ILNPISADMSNMRTSLLPG 551 +++ +A+ EV+++S S++ G ++++ I NP + + RT+LLPG Sbjct: 332 LRQDIAAAGFTEVLSFSLCSRDDVA--GKLNKDIDSSGAVHIANPKTLEFQIARTTLLPG 389 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWS 606 +LK N + +FE+S + D +++ A + G E L Sbjct: 390 ILKTVASNKKMPLP-MKLFEISDIMLQDKDKDVGARNERHFCAVYYNKNPGFEIIHGLLD 448 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGA--PSWYHPGRSGIIKTSAEIVL 664 RF+ L + P+ S F A P+++ PGR + A++V Sbjct: 449 -------RFMQLLEV---------PYSKEGSGYFIRAADDPTFF-PGRCAEVVVKAQVV- 490 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G G HP+++ F L+NP E+ L+++ Sbjct: 491 GKLGVLHPDVITKFELNNPCAALEINLEAL 520 >gi|323303995|gb|EGA57775.1| Frs1p [Saccharomyces cerevisiae FostersB] Length = 595 Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 171/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|257386729|ref|YP_003176502.1| phenylalanyl-tRNA synthetase subunit beta [Halomicrobium mukohataei DSM 12286] gi|257169036|gb|ACV46795.1| phenylalanyl-tRNA synthetase, beta subunit [Halomicrobium mukohataei DSM 12286] Length = 603 Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 96/433 (22%), Positives = 168/433 (38%), Gaps = 83/433 (19%) Query: 309 RIQSIAGIIGGKHAGCDDNTTDVLVEV----ALWDPINIAR-----SGKNLGIITDSRYR 359 R + A + H G + D++ E+ A++D I + +GK + T SR Sbjct: 206 RAMTPAEVTETHHIGVE--YADLVAEMDRVPAIYDSIGLFSFPPVINGKRTEVDTGSRDL 263 Query: 360 F--ERGVDLQGMIPVLKHIVSLILSLCGGTASDICI----------ARNITYKP----RK 403 F G D Q I + IV L GGT ++ + A +P + Sbjct: 264 FIEMTGTD-QWTIDHMLSIVCYALDARGGTVEEVAVEYTDGAPGEYAGQSFLRPDLGTKT 322 Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK---FEVSVPSWRQDVEEKADLV 460 + ++ + G+D+ + + +R G E D +E +P +R DV D++ Sbjct: 323 KTVAHDRIETILGVDLDKREIGDLADRAGLDA-SETDTDGVYEFEIPPYRVDVLHPIDVI 381 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ 520 +++ R YG + ++ ++ V + + S + TR VL +++N+ IS+E Sbjct: 382 DDLGRAYGFNTLEPRYPDVSTVGGRHDRSKLERATR---DVLVGLGFEDLLNFYMISEEA 438 Query: 521 ----------SVLFGGGQRELEILNPISADMSNMRTSLLPGLL----KATGRNVDRAIAD 566 S + GGG + I P S D + +R+ LP ++ T R+ + +A+ Sbjct: 439 NYERLQVTPGSDVVGGGD-PVTIQEPYSEDYTMLRSWALPSIMLVLENNTHRSYPQDLAE 497 Query: 567 FAI-FEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 + EV + E + AA R +S + RL + + FD Sbjct: 498 IGLAVEVDESTNTNVAEHRTVAAAVARHDASYEDAKTRLQAIAAN--------FDT---- 545 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNILDFFGLS 681 E P HP GR+ ++ E V G GE P +L L Sbjct: 546 ---------------ELATPPIDHPTFIDGRTAAVELDGEAV-GVVGEVDPAVLVEHDLE 589 Query: 682 NPICGFEVYLDSI 694 P+ FE LD++ Sbjct: 590 VPVAAFEFRLDAL 602 >gi|159041766|ref|YP_001541018.1| B3/4 domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920601|gb|ABW02028.1| B3/4 domain protein [Caldivirga maquilingensis IC-167] Length = 236 Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 3/106 (2%) Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS--DVLTVRRACSGEKILALD 291 +R+ LK GL I+ LVDI N S+ P ++D +I D + +RRA GE L Sbjct: 84 IRRILKGDGLPRINPLVDIGNVASVKYKVPVGLYDLRKIGQVDYIVLRRAADGELFTPLG 143 Query: 292 NQEYDLSPDNVVIAS-DGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 + + +L+ + +V+A+ DGRI + + D+ T+DVL+ VA Sbjct: 144 SPKMELTRNQIVLATNDGRILHVYPYRDSELTKVDEFTSDVLIIVA 189 >gi|296111921|ref|YP_003622303.1| hypothetical protein LKI_08975 [Leuconostoc kimchii IMSNU 11154] gi|295833453|gb|ADG41334.1| hypothetical protein LKI_08975 [Leuconostoc kimchii IMSNU 11154] Length = 218 Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 5/114 (4%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRI-DTGKHQE 72 +D + I D + G + E + S + +V + +PD D + I + GK + Sbjct: 68 SDEQINIINDEIEKAGFKAELTTSE---SKLVVGRVQRMTPHPDSDHLHVTITEVGKGKT 124 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML 126 +Q+V G+PN++VG+ A PG+ +P +I + ++RG+ S+GM+ S +EL L Sbjct: 125 LQIVSGSPNMQVGIKVAVAQPGTMMPSGALIWS-GELRGVASSGMIVSGRELQL 177 >gi|12644048|sp|O13432|SYFB_CANAL RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3859677|emb|CAA22014.1| phenylalanyl-tRNA synthetase [Candida albicans] Length = 592 Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 98/470 (20%), Positives = 189/470 (40%), Gaps = 97/470 (20%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 P + + + NR D + + GIA L LG N S I L IK + + Sbjct: 50 PQLKIEVPANRYDMLCIEGIAQAL-NEFLGNTSAPNYKLSPSKPEISLTIK---ESTYPI 105 Query: 215 KGFAMCCVK--------------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 + +A + +++ + N R R L A+G + L Sbjct: 106 RQYAASAILRNVNLDERAYDSFIALQDKLHANLCRNRTLVAIGTHDLDTLT--------- 156 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 P ++A D+ L + +GE+++ ++ ++ SP V+ Sbjct: 157 ---PPFTYEALAPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLD 213 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II H+ NT +V ++V D L + SRY E + Sbjct: 214 ANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRTKTEIVINQL-VAMFSRYCKE-PFE 271 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIED 423 ++ + + +H + +C NIT + K I ++NS V G++ E+ Sbjct: 272 IEPVQIISEH----------NNETRVC--PNITPRTAKAEISYINSCV----GLNYSGEE 315 Query: 424 SLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L+++ E D +V +P R D+ + D++E++ YG D +K Sbjct: 316 ISKLLKKMSLDATPSTEERDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPQAE 375 Query: 474 ---SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----G 525 + PLP+ +V D + R+ +S+A +EV+ + S +++ + Sbjct: 376 SLVAAPLPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDENFAWLKQKD 422 Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 G + +++ NP + + +RT+LLPG+LK N ++ +FE + Sbjct: 423 DGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLP-IKVFECGDI 471 >gi|195036408|ref|XP_001989662.1| GH18917 [Drosophila grimshawi] gi|193893858|gb|EDV92724.1| GH18917 [Drosophila grimshawi] Length = 588 Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 93/408 (22%), Positives = 149/408 (36%), Gaps = 70/408 (17%) Query: 298 SPDNVVIASDGRI-QSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 SP VI R+ S+ II G H+ +T +V +E Sbjct: 217 SPVYPVIYDANRVVLSLPPIINGDHSKISLSTKNVFIECT-------------------- 256 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI--ARNITYKPRKIVFMNSEVKRL 414 DL VL IV L C ++ ++Y + VKR Sbjct: 257 ------ATDLTKAKVVLDTIVCLFSEKCTVEPCNVVQPDGTTVSYPELAVREERVSVKRA 310 Query: 415 S---GIDVPIEDSLRILERLGFSV---IGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 + GI+ P +L R+ + D V +P R DV D+ E+I +G Sbjct: 311 NAYIGINEPATKLADMLTRMYLEAKVDAKDGDTLSVKIPPTRHDVIHACDIYEDIAIAFG 370 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + IK Q+ + L+ T ++ +A E + ++ S++ + Sbjct: 371 YNNIKKSLPAFMQIAKQFPLN---KLTEQLREQVAQAGFTEALTFTLCSRDD--IARKLN 425 Query: 529 RELEIL------NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 +E+E L NP + + +RT+L+PGLLK N + +FE+S D Sbjct: 426 KEIESLPAVHIGNPKTLEFQVVRTTLVPGLLKTLVANRKMPLP-LKLFEIS-----DVVV 479 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFV---DLFDAKADALSVIEPF---VSLD 636 + G R RL + + F L D LSV P+ + Sbjct: 480 VAESSEVGAR-------NERRLCAINCNKNAGFEVVHGLLDRVMQLLSV--PWKTGTAEK 530 Query: 637 SLRFESGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 ++ Y PGR + II +A V+G G HP++L F L+ P Sbjct: 531 GYHLQATEDPSYFPGRCANIILNTA--VIGRIGVLHPSVLQAFELTTP 576 >gi|254556387|ref|YP_003062804.1| hypothetical protein JDM1_1220 [Lactobacillus plantarum JDM1] gi|254045314|gb|ACT62107.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 213 Score = 51.6 bits (122), Expect = 6e-04, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V S E +P D I + + G Q +Q+V G+PN++ +L V A G+ +P + + Sbjct: 97 FVVGYVESAEAHPKSDHLQITKTNVGLDQPLQIVSGSPNMQADILVVVAKVGAMMP-SGL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPID-APVGG 144 I+ ++RG+ES GM+ S +EL L + + LP D PVG Sbjct: 156 IIWPGELRGVESDGMIVSGRELQLPNAPQRPGALILPADYQPVGA 200 >gi|308180359|ref|YP_003924487.1| tRNA-binding domain protein [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045850|gb|ADN98393.1| tRNA-binding domain protein [Lactobacillus plantarum subsp. plantarum ST-III] Length = 213 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 5/105 (4%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V S E +P D I + + G Q +Q+V G+PN++ +L V A G+ +P + + Sbjct: 97 FVVGYVESAEAHPKSDHLQITKTNVGLDQPLQIVSGSPNMQADILVVVAKVGAMMP-SGL 155 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPID-APVGG 144 I+ ++RG+ES GM+ S +EL L + + LP D PVG Sbjct: 156 IIWPGELRGVESDGMIVSGRELQLPNAPQRPGALILPADYQPVGA 200 >gi|313623559|gb|EFR93739.1| tRNA-binding domain-containing protein [Listeria innocua FSL J1-023] Length = 205 Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 7/102 (6%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + L+P F + V S E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 85 GFEPEIVAD---LTPKFVVGYVESKEKHPNADKLNVCQINVGG-EVLQIVCGAPNIEAGQ 140 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 V A G+ +P + +I+ +RG +S GM+C+ +EL + + Sbjct: 141 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPN 181 >gi|51013007|gb|AAT92797.1| YLR060W [Saccharomyces cerevisiae] Length = 595 Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 92/411 (22%), Positives = 171/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYLPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|156375077|ref|XP_001629909.1| predicted protein [Nematostella vectensis] gi|156216919|gb|EDO37846.1| predicted protein [Nematostella vectensis] Length = 587 Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 96/409 (23%), Positives = 161/409 (39%), Gaps = 53/409 (12%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+ + S+ II G+H+ NT +V +E D ++ A+ + + S Y E Sbjct: 215 VIYDSNNVVLSMPPIINGEHSKITLNTKNVFIESTATD-LHKAKIVLDTLVTMFSVYCKE 273 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 V + S+ + G+ I + + Y R V E+ + GI Sbjct: 274 PFV-----------VESVEVEQPDGS---ILVYPELKY--RHEVVSVDEINKKIGISESP 317 Query: 422 EDSLRILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E ++L ++ V+ +V +P R DV D++E++ YG + I E +P Sbjct: 318 ESIAKLLTKMCLRSEVLDGGKSVKVEIPPTRADVLHGCDIIEDVAIAYGFNNI-VETIPS 376 Query: 480 TQVEDKRNLSLQQSRTRYVKRVL----ASRAMMEVVNWSFISK----EQSVLFGGGQREL 531 T N Q + V +L A EV+ ++ S+ E+ R + Sbjct: 377 T------NTIANQFQLNKVCDLLGQEIAQAGFTEVLTFALCSRDDVSEKLKKPLSESRAV 430 Query: 532 EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND------TPEGQK 585 I NP + + RT+LLPG+LK N + +FE+S V D ++ Sbjct: 431 HIGNPKTLEFQVARTTLLPGILKTLCCNKKMPLP-IKLFEMSDVVRKDDNKDVGARNNRR 489 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 + A K + G E L R + L + K P LR A Sbjct: 490 FCAVNYNK-TPGFEVIHGLLD-------RTMQLLEIKPTEDKHTNPNQGY-HLRQHDDA- 539 Query: 646 SWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + PGR G + + V G G HP+++ F L+ P E+ L++I Sbjct: 540 -TFFPGRCGEVVVNGRPV-GIVGVLHPDVVSRFDLNLPCAALEIDLEAI 586 >gi|256271842|gb|EEU06872.1| Frs1p [Saccharomyces cerevisiae JAY291] Length = 595 Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 170/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII-----KTSAEIVLGYFGEFHPNILDFF 678 E + Y PGR + + + +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGTEPKQIGHLGVLHPEVMMNF 578 >gi|300767139|ref|ZP_07077051.1| tRNA-binding domain protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494958|gb|EFK30114.1| tRNA-binding domain protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 247 Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 8/138 (5%) Query: 11 HLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGK 69 HL T +E++ + L + E E V + + F + V S E +P D I + + G Sbjct: 101 HL-TAEQVEQLNNLLKTNDFEPELVLDTDP--KFVVGYVESAEAHPKSDHLQITKTNVGL 157 Query: 70 HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD- 128 Q +Q+V G+PN++ ++ V A G+ +P + +I+ ++RG+ES GM+ S +EL L + Sbjct: 158 DQPLQIVSGSPNMQADIVVVVAKVGAMMP-SGLIIWPGELRGVESDGMIVSGRELQLPNA 216 Query: 129 -DSASIMELPID-APVGG 144 + LP D PVG Sbjct: 217 PQRPGALILPADYQPVGA 234 >gi|115976823|ref|XP_001185913.1| PREDICTED: similar to Phenylalanine tRNA synthetase like beta subunit [Strongylocentrotus purpuratus] Length = 574 Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 23/169 (13%) Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT-PEG 583 + + I NP +A+ RT+LLPG+LK N + FE+S V E D E Sbjct: 421 KAVHISNPKTAEFQVARTALLPGVLKTISCNRKMPLP-IKAFEISDVVLQNPEKDVGAEN 479 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +++ A S G E L D L V PF D +S Sbjct: 480 RRHFCAVHYNKSPGFE--------------VIHGLLDRTMQLLQV--PFSKEDGYHLKSA 523 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y GR + + + GY G HPN++ F L NP E+ ++ Sbjct: 524 ENPTYFSGRCAEVIVRGKSI-GYLGVIHPNVVSKFELPNPCAALEISIE 571 >gi|205374468|ref|ZP_03227264.1| hypothetical protein Bcoam_15346 [Bacillus coahuilensis m4-4] Length = 200 Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats. Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F + V S E++PD D + ++ G + +Q+VCGAPNV G V A G+ +P Sbjct: 92 FSPKFVVGYVESKEKHPDADKLNVCSVNVGD-KTLQIVCGAPNVDAGQKVVVAKVGAVMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + M++ ++RG+ S+GM+CS KEL L + Sbjct: 151 -SGMVIKDAELRGVASSGMICSAKELDLPN 179 >gi|227530462|ref|ZP_03960511.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus vaginalis ATCC 49540] gi|227349567|gb|EEJ39858.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus vaginalis ATCC 49540] Length = 216 Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 10/141 (7%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNP---DLDCAILRIDTGKH 70 +D + K+ LT G E + F + V +E +P L R++ GK Sbjct: 70 SDEQVAKLNKVLTQAGFTDELTADH--TPKFVVGYVEKIEDHPKSDHLKITQTRVEDGK- 126 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD-- 128 +Q+VCG+PNV+ + V A PG+ +P + I+ ++ G++S GM+C +EL L + Sbjct: 127 -TVQIVCGSPNVKEHIKVVAARPGAMMP-SGKIIWPGELMGVKSEGMLCGFRELRLKNAP 184 Query: 129 DSASIMELPIDAPVGGRLSDY 149 D + +P D G D+ Sbjct: 185 DKKGLWIIPDDWQETGEAVDF 205 >gi|115686229|ref|XP_797353.2| PREDICTED: similar to Phenylalanine tRNA synthetase like beta subunit [Strongylocentrotus purpuratus] Length = 535 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 66/169 (39%), Gaps = 23/169 (13%) Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY----ENDT-PEG 583 + + I NP +A+ RT+LLPG+LK N + FE+S V E D E Sbjct: 382 KAVHISNPKTAEFQVARTALLPGVLKTISCNRKMPLP-IKAFEISDVVLQNPEKDVGAEN 440 Query: 584 QKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESG 643 +++ A S G E L D L V PF D +S Sbjct: 441 RRHFCAVHYNKSPGFE--------------VIHGLLDRTMQLLQV--PFSKEDGYHLKSA 484 Query: 644 APSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLD 692 Y GR + + + GY G HPN++ F L NP E+ ++ Sbjct: 485 ENPTYFSGRCAEVIVRGKSI-GYLGVIHPNVVSKFELPNPCAALEISIE 532 >gi|315303397|ref|ZP_07874002.1| phenylalanyl-tRNA synthetase beta chain [Listeria ivanovii FSL F6-596] gi|313628233|gb|EFR96761.1| phenylalanyl-tRNA synthetase beta chain [Listeria ivanovii FSL F6-596] Length = 129 Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats. Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 7/102 (6%) Query: 29 GLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGL 86 G E E V + LSP F + V + E++P+ D + +I+ G + +Q+VCGAPN+ G Sbjct: 9 GFEPEIVAD---LSPKFVVGYVEAKEKHPNADKLNVCQINIGG-EVLQIVCGAPNIEAGQ 64 Query: 87 LGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 V A G+ +P + +I+ +RG +S GM+C+ +EL + + Sbjct: 65 KVVVAKIGAVMP-SGLIIKPSNLRGEDSFGMVCAARELAIPN 105 >gi|119719859|ref|YP_920354.1| phenylalanyl-tRNA synthetase subunit beta [Thermofilum pendens Hrk 5] gi|166200183|sp|A1RYS1|SYFB_THEPD RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|119524979|gb|ABL78351.1| phenylalanyl-tRNA synthetase beta subunit [Thermofilum pendens Hrk 5] Length = 556 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 92/405 (22%), Positives = 165/405 (40%), Gaps = 65/405 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 +++ ++G++ S I + ++T DVL++V DP +G+ + Sbjct: 194 LIVDAEGKVVSFPPITNSEDFRVTESTRDVLIDVTSTDP----EAGRRI----------- 238 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNI-----TYKPRKIVFMNSEVKRLSG 416 I + H V++ GG + + + +P ++V+ S + L G Sbjct: 239 --------ISLFAHAVAV----RGGEVRPLRLKGALDEESPRMEPEEVVYDVSMNRDLLG 286 Query: 417 IDVPIEDSLRILE--RLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 +D+ +E+++R+L R+ G K V P +R D+ D+ EE+ YG ++I Sbjct: 287 LDLGVEETVRLLRAMRMDAEPAGN-GKVAVRYPYFRVDILHPVDIAEEVAMGYGYERI-- 343 Query: 475 EPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGG----GQRE 530 EP + + R ++ TR ++ + +EV N+ S S++F Q Sbjct: 344 EPAVIPPLHPGREDPIEVF-TRALREGMVGLGFVEVNNYMMTSA--SLMFDAMLLPRQPI 400 Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +E+ NP +RT ++P LL+ + A +FE V D E + Sbjct: 401 VEVENPRHEAYHALRTWIVPQLLRLMSSS-KHAGYPQRVFEAGDVAIPD--ESRDNRVRE 457 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWYH 649 R+ + + G G V L D A AL + F L S + E + Sbjct: 458 ERRLAFAVAGKG-------------VTLTDGLA-ALKGL--FRQLGVSFKLEKAEHPSFI 501 Query: 650 PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 GR + T A G GE HP +L FGL P+ E+ ++ + Sbjct: 502 AGRVARVVTEAGDA-GIVGEVHPQVLVNFGLEVPVVAGELNVEVV 545 >gi|146304870|ref|YP_001192186.1| phenylalanyl-tRNA synthetase subunit beta [Metallosphaera sedula DSM 5348] gi|172046955|sp|A4YIL0|SYFB_METS5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|145703120|gb|ABP96262.1| phenylalanyl-tRNA synthetase beta subunit [Metallosphaera sedula DSM 5348] Length = 540 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/294 (23%), Positives = 119/294 (40%), Gaps = 27/294 (9%) Query: 391 ICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 + + R+ + + F +V + GI V ++++ ++ + V D V VP +R Sbjct: 260 MSVDRSPVLRHTSVPFSLDDVNKRLGIHVSRDEAINLIRMMRMEVETNKD-LAVIVPPYR 318 Query: 451 QDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 D+ D+ E+I YG D+ E + + +LS + R ++ +L EV Sbjct: 319 VDIMNYTDVAEDIAMAYGYDRFTLES---GRTASRGSLSEKSEIYRKLRTLLVGAGFQEV 375 Query: 511 VNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 ++ + + S G + I NPIS + ++R SLL L N + IF Sbjct: 376 --YTLVLTKSSYQRGEA---VNIANPISVEYDSVRNSLLWNSLVFLSNN-QHSRFPVRIF 429 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 E+ V D + KY S RL + R + ++ A + + Sbjct: 430 EIGDVVNRDDSKDTKY------------SNSTRLSMAIMDSRVSY-EMLQAPLHEVLLNL 476 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPI 684 V+ RFES + GRS + E + G GE +P +L FGL P+ Sbjct: 477 LGVAPSYRRFES---DIFMKGRSAEVVVKGETI-GRLGEANPELLRSFGLLYPV 526 >gi|241958090|ref|XP_002421764.1| phenylalanyl-tRNA synthetase beta chain, putative [Candida dubliniensis CD36] gi|223645109|emb|CAX39705.1| phenylalanyl-tRNA synthetase beta chain, putative [Candida dubliniensis CD36] Length = 630 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 100/468 (21%), Positives = 189/468 (40%), Gaps = 101/468 (21%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLC 214 P + + + NR D + + GIA L LG N S I L IK + + Sbjct: 88 PQLKIEVPANRYDMLCIEGIAQAL-NEFLGNTPAPNYKLNPSKPEISLTIK---ESTYPI 143 Query: 215 KGFAMCCVK--------------GVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLD 259 + +A + +++ + N R R L A+G + L Sbjct: 144 RQYAASAILRNVNLDERAYDSFIALQDKLHSNLCRNRTLVAIGTHDLDTLT--------- 194 Query: 260 RGYPSHVFDASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIAS 306 P ++A D+ L + +GE+++ ++ ++ SP V+ Sbjct: 195 ---PPFTYEALPPKDIVFKPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLD 251 Query: 307 DGR-IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 R + S+ II H+ NT +V ++V D L + SRY E + Sbjct: 252 ANRTVASLPPIINSDHSKITLNTKNVWIDVTGTDRTKTEIVINQL-VAMFSRYCKE-PFE 309 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRK--IVFMNSEVKRLSGIDVPIED 423 ++ + + +H + +C NIT + K I ++NS V G+D ++ Sbjct: 310 IEPVQIISEH----------NKETRVC--PNITPRTAKAEISYINSCV----GLDYSGDE 353 Query: 424 SLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 ++L+++ E D +V +P R D+ + D++E++ YG D +K Sbjct: 354 ISKLLKKMSLDATPSTEEKDILDVKIPITRSDILHQCDIMEDVAIGYGYDNLKKTKPKAE 413 Query: 474 ---SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFG---- 525 + PLP+ +V D + R+ +S+A +EV+ + S +++ FG Sbjct: 414 SLVAAPLPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDEN--FGWLKQ 458 Query: 526 --GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 G + +++ NP + + +RT+LLPG+LK N ++ +FE Sbjct: 459 KDDGTKAVKLENPKTIEYQVVRTTLLPGILKTVKENRKHSLP-IKVFE 505 >gi|116492452|ref|YP_804187.1| EMAP domain-containing protein [Pediococcus pentosaceus ATCC 25745] gi|116102602|gb|ABJ67745.1| EMAP domain [Pediococcus pentosaceus ATCC 25745] Length = 210 Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust. Identities = 43/136 (31%), Positives = 73/136 (53%), Gaps = 12/136 (8%) Query: 14 TDVSLEKICDTLTSIGLEVEKV-DNREALSPFTIVKVLSVERNPDLDCAIL---RIDTGK 69 T ++++ TL++ G E E V D R F + V S + +PD D ++ +D G Sbjct: 68 TQEQVKQLNATLSANGFEAELVADER---PKFVVGYVKSTKPHPDSDHLLITETEVDNG- 123 Query: 70 HQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD- 128 + +Q+V G+PN+ + V A G+ +P+ MI+ ++RG+ES GM+ S +EL L++ Sbjct: 124 -ETLQIVSGSPNMTDNIKVVVAKVGAIMPDG-MIIWPGELRGVESNGMISSGRELHLNNA 181 Query: 129 -DSASIMELPIDAPVG 143 + LP D VG Sbjct: 182 PQKKGALILPDDFVVG 197 >gi|219119420|ref|XP_002180471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217407944|gb|EEC47879.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 640 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 81/340 (23%), Positives = 133/340 (39%), Gaps = 74/340 (21%) Query: 403 KIVFMNSEVKRLSGIDVPIEDSLRILER--LGFSVIGEYDK-FEVSVPSWRQDVEEKADL 459 K+ F NS L GI + ++ + + LG + + E D +V+VP R D+ D+ Sbjct: 326 KVDFCNS----LIGIQITPQEMQALCNKVQLGPAQLLENDTVLQVTVPPTRSDILHPVDI 381 Query: 460 VEEILRIYGVDQIKSE---------PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 E+I YG + I+ PL Q D L + R YV EV Sbjct: 382 AEDIGIAYGYNNIRRRVPTTNTVGGEFPLNQTGDL--LREEIGRAGYV----------EV 429 Query: 511 VNWSFISKEQSVLFGGGQR----ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIA- 565 + S + F QR +++ NP + + +RT+LLPGLLK N + Sbjct: 430 LTHGLCSVRDN--FTALQRPVTAAVKLSNPANVEYQVVRTTLLPGLLKTLQHNKSASFTG 487 Query: 566 DFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 F +FE+S V P+ + M I G + S RL + + F ++ D Sbjct: 488 GFKLFEISDVV---LPDSENVMTETI----VGAKNSRRLAAVYAGPTSGF-EIIHGLVDR 539 Query: 626 LSVI------EPFVS----LDSLRFESGAPSW----------------YHPGRSGII--- 656 + + E +++ D + W Y PGR+ I Sbjct: 540 VMTLLEIAPEEAYIANSAKSDEEEYRVAREGWTYTIASLSESDPHVNTYFPGRAAAILLT 599 Query: 657 --KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ V+G FG HP++L F + P E+ L+++ Sbjct: 600 KPNATSSCVVGTFGILHPDVLANFDILYPSSCVELDLEAL 639 >gi|190406099|gb|EDV09366.1| phenylalanine-tRNA ligase subunit [Saccharomyces cerevisiae RM11-1a] Length = 595 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 89/411 (21%), Positives = 170/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F G +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNGDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E +++ AA +SG E G L R ++ + A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGVAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|23099688|ref|NP_693154.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacillus iheyensis HTE831] gi|22777918|dbj|BAC14189.1| phenylalanyl-tRNA synthetase beta subunit [Oceanobacillus iheyensis HTE831] Length = 202 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 4/86 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L+P F + V + E + + D ++ ++D G +++Q+VCGAPNV V A G+ +P Sbjct: 92 LTPKFVVGYVTTKEPHENADKLSVCQVDVGT-EKLQIVCGAPNVDANQKVVVAKVGATMP 150 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKEL 124 + M + ++RG+ S GM+CS+KEL Sbjct: 151 -SGMKIKDSELRGVPSNGMICSQKEL 175 >gi|56753563|gb|AAW24984.1| SJCHGC06626 protein [Schistosoma japonicum] Length = 625 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 69/311 (22%), Positives = 116/311 (37%), Gaps = 72/311 (23%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S + S+ II G+H+ T ++ +E Sbjct: 221 VILDSSNVVLSMPPIINGEHSRISTKTRNIFIEAT------------------------- 255 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGG--TASDI---------CIARNITYKPRKIVFMNSE 410 G DL I VL ++++ C TA + C+ ++ Y R V Sbjct: 256 -GTDLHKAIVVLDTLITMFSEYCKEPFTAEAVEVIQHDGSCCLYPHLEY--RDEVVSVDY 312 Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIG-EYDKFE------------------VSVPSWRQ 451 + R G D + +L R+GF+ ++F+ V +P R Sbjct: 313 INRQLGTDFSEPQVINLLNRMGFTCASTSSNQFKDSTPNMLTAGQNTSGLISVKIPPTRH 372 Query: 452 DVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMM--- 508 D+ D+ E++ +G D I E LP T ++ Q +R + A A M Sbjct: 373 DILHACDIAEDVAIAFGYDNI-PESLPQTYC-----VAGNQPVSRLTDLIRAEIAQMGFT 426 Query: 509 EVVNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAI 564 E +++S S+E + + + I NP + D +RTSLLPGLL N + Sbjct: 427 EALSFSLCSREDISTRLRHKLDDIPAVHISNPKTLDFQVVRTSLLPGLLHTLSNNRSLPL 486 Query: 565 ADFAIFEVSHV 575 +FEV + Sbjct: 487 P-LKLFEVQDI 496 >gi|118575283|ref|YP_875026.1| phenylalanyl-tRNA synthetase beta subunit [Cenarchaeum symbiosum A] gi|118193804|gb|ABK76722.1| phenylalanyl-tRNA synthetase beta subunit [Cenarchaeum symbiosum A] Length = 403 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 81/366 (22%), Positives = 144/366 (39%), Gaps = 52/366 (14%) Query: 341 INIARSG---KNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI--AR 395 IN AR+ K LG+ D G D + + VL +++L L G T + + A Sbjct: 73 INAARTTVNTKTLGLFVDVT-----GTDKRVIEDVLS-VIALTLQGAGFTLYSVRVSGAG 126 Query: 396 NIT--YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 N T ++PRK+ V G+D+ + L + I + E ++P R D+ Sbjct: 127 NSTPLFRPRKMRLDAQLVNSTLGLDLKPTAIVNALRKSRLDAIAKGKIIECTIPRHRFDI 186 Query: 454 EEKADLVEEILRIYGVDQIKSEPLPLTQ---VEDKRNLSLQQSRTRYVKRVLASRAMMEV 510 + DLVE+ YG+D++ LP + + + LQ +R ++ E+ Sbjct: 187 LGEMDLVEDAALGYGMDKLGPR-LPTSSTLGMAHPIQVMLQSARG-----IMTGLGYTEI 240 Query: 511 VNWSFISKEQSVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIAD 566 +N S SK +L+ R+ + + + S + + +R SLLPG++ + N+ Sbjct: 241 LNSSLTSKR--ILYENTDRDPSKMISVSDSKSLEHTILRDSLLPGVIDSLAANIHHEYPQ 298 Query: 567 FAIFEVSHVYENDTP-EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADA 625 +FE+ V+ +P Q + A GS+G F Sbjct: 299 -RLFEIGTVFGRGSPVSEQGSLCAASSHGSAG---------------------FTEIKST 336 Query: 626 LSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPIC 685 L + + + + G S + + V+G GE + + F L P+ Sbjct: 337 LQSAARHILGGTCKTRPAPHDIFEEGHSAEVLVGGK-VIGIAGELSGTVRERFRLREPVS 395 Query: 686 GFEVYL 691 FE+ L Sbjct: 396 AFEIKL 401 >gi|212638297|ref|YP_002314817.1| EMAP domain RNA-binding protein [Anoxybacillus flavithermus WK1] gi|212559777|gb|ACJ32832.1| EMAP domain RNA-binding protein [Anoxybacillus flavithermus WK1] Length = 202 Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 SP F + V E++P+ D ++ ++D G + +Q+VCGAPNV G V A G+ +P Sbjct: 93 FSPKFVVGYVKEKEKHPNADKLSVCQVDVGT-ETLQIVCGAPNVEAGQKVVVAKVGAVMP 151 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +++ ++RG++S GM+CS +EL L + Sbjct: 152 -SGLVIQEAELRGVKSYGMICSARELDLPN 180 >gi|16800716|ref|NP_470984.1| hypothetical protein lin1648 [Listeria innocua Clip11262] gi|16414135|emb|CAC96879.1| pheT [Listeria innocua Clip11262] Length = 205 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L+P F + V S E++P+ D + +I+ G + +Q+VCGAPN+ G V A G+ +P Sbjct: 94 LTPKFVVGYVESKEKHPNADKLNVCQINVG-GEVLQIVCGAPNIDAGQKVVVAKIGAVMP 152 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +I+ +RG +S GM+C+ +EL + + Sbjct: 153 -SGLIIKPSNLRGEDSFGMVCAARELAIPN 181 >gi|67624483|ref|XP_668524.1| phenylalanyl-tRNA synthetase beta-subunit; PheHB -related [Cryptosporidium hominis TU502] gi|54659738|gb|EAL38303.1| phenylalanyl-tRNA synthetase beta-subunit; PheHB -related [Cryptosporidium hominis] Length = 647 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 113/457 (24%), Positives = 183/457 (40%), Gaps = 92/457 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY--- 358 VV S+G + S+ +I G + NT +V +EV D N A N + + S Y Sbjct: 207 VVTDSNGIVLSVPPLINGSQSKITLNTKNVFIEVTATD-YNRASIVLNQIVSSFSMYCKN 265 Query: 359 RFE-RGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 +FE V ++ P H + L G + N+ + + V SE L Sbjct: 266 KFEIEPVKVEYEHSTYPPFPHKYEV---LANGNYH--VVTPNV--ERLEFVVKASEASNL 318 Query: 415 SGIDVPIEDSL---RILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGV 469 GI+ PI D + +L ++ +I + + + VP R D+ D++E+I +G Sbjct: 319 LGIN-PILDPIVAQSLLRKMMIDSEIIKDNESLKCFVPINRSDILHPVDIIEDIGISFGF 377 Query: 470 DQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK----------- 518 + I+ + ++ DK NL +Q VKR L+ + E +NW+ Sbjct: 378 NNIELKKSRFYEL-DKSNLMAEQ-----VKRELSLLGISESLNWALCKHSDCFESLFRTE 431 Query: 519 --------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIF 570 E V + + + + +++ +RT+L+ LLK N + IF Sbjct: 432 NIKLKNLFESEVQYNLNCPPVVVKDAKTSEFEILRTTLIQSLLKTIASNKSLPLPQ-KIF 490 Query: 571 EVSHV--YENDTPEGQ---KYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK--- 622 EV V +N+TP G K +A S GSG EE F+D +K Sbjct: 491 EVGDVVILDNNTPSGSRNDKRVAIAYCNSS----GSGL------EEIHGFLDQLLSKLGL 540 Query: 623 ADALSVIEP------FVSLDSLRFESGAPSWYHPGRS-----------------GIIKT- 658 S+ EP + + SL E PS+ P RS I KT Sbjct: 541 VAEYSLNEPNSIHPNIIGMYSLS-EVNDPSFL-PTRSVKITIQKVELNSCLKSIDIEKTM 598 Query: 659 -SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + ++V+G G HP +L+ F L+ P E+ L+ I Sbjct: 599 LNKQVVIGIMGVVHPKVLNNFSLTLPTSVLELRLEPI 635 >gi|313618681|gb|EFR90616.1| tRNA-binding domain-containing protein [Listeria innocua FSL S4-378] Length = 213 Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust. Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 4/90 (4%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 L+P F + V S E++P+ D + +I+ G + +Q+VCGAPN+ G V A G+ +P Sbjct: 94 LTPKFVVGYVESKEKHPNADKLNVCQINVG-GEVLQIVCGAPNIDAGQKVVVAKIGAVMP 152 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 + +I+ +RG +S GM+C+ +EL + + Sbjct: 153 -SGLIIKPSNLRGEDSFGMVCAARELAIPN 181 >gi|261495202|ref|ZP_05991664.1| phenylalanine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309127|gb|EEY10368.1| phenylalanine--tRNA ligase [Mannheimia haemolytica serotype A2 str. OVINE] Length = 83 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 52/83 (62%), Gaps = 3/83 (3%) Query: 723 IVDQHIPAGTLVNIIKNV--DRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 +VD+ +PAG ++ + ++L+ V +FDV++G +L GKKS+AI + +Q + T + Sbjct: 1 MVDESVPAGEVLEACRKAGGNKLVA-VNLFDVYRGSNLESGKKSLAISLTVQDNEKTLEE 59 Query: 781 DDIRILMDRIVENVVKKTNAVLR 803 ++I ++ ++ + + NAVLR Sbjct: 60 NEINAVIQAVLAELATRFNAVLR 82 >gi|171186052|ref|YP_001794971.1| B3/4 domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935264|gb|ACB40525.1| B3/4 domain protein [Thermoproteus neutrophilus V24Sta] Length = 221 Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats. Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 25/162 (15%) Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRI-SDVLTVRRACSGEKILALDN 292 +R+ L+ L I+ +VD N VS+ P ++D ++I + L +RR+ GE + Sbjct: 84 LRRVLRGEPLPRINPVVDAGNAVSIKYVVPIGIYDIAKIRGETLRLRRSRRGEVFRPIGG 143 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 Q Y+L + +V+ASDG+I + D+ T DVLV +A G+ Sbjct: 144 QPYELD-NQIVLASDGQILHVYPYRDSVETKVDETTRDVLVVIA--------------GV 188 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIA 394 GV+ + ++ +H+ +L+ L G A DI +A Sbjct: 189 ---------PGVEEERLLEAARHLRALLTLLGGAAAGDIRLA 221 >gi|81428250|ref|YP_395250.1| putative aminoacyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] gi|78609892|emb|CAI54939.1| Putative aminoacyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K] Length = 209 Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats. Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 3/91 (3%) Query: 55 NPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIE 113 +PD D + + Q +Q+VCGA N+ G + A G+ +PE I+ ++RG++ Sbjct: 107 HPDSDHMHVTQTQIAPDQTVQIVCGAANIAQGQKVIVATVGAVMPEGK-IIWPSQLRGVQ 165 Query: 114 STGMMCSEKELMLSDDSAS-IMELPIDAPVG 143 S GM+C+ +E+ + A IM LP D VG Sbjct: 166 SDGMICAAREIGVEGAPAKGIMVLPDDWEVG 196 >gi|71894631|ref|YP_278739.1| hypothetical protein MS53_0621 [Mycoplasma synoviae 53] gi|71851419|gb|AAZ44028.1| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 199 Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Query: 44 FTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 FT KVL VE++P D +L++D + +E+Q+V + V+ ++ + A PGS + ++ Sbjct: 95 FTFAKVLEVEKHPKSDSLFVLKLDAKRDKEVQIVTNSTLVKKDMIILIANPGSVTAKGDV 154 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDD 129 I+ + GIES GM+ S K + D Sbjct: 155 ILK-SSVMGIESQGMIMSYKNAAVDKD 180 >gi|322490515|emb|CBZ25776.1| putative phenylalanyl-tRNA synthetase [Leishmania mexicana MHOM/GT/2001/U1103] Length = 633 Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 102/269 (37%), Gaps = 45/269 (16%) Query: 447 PSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL---- 502 P R DV AD++E++ YG D I T VE K + + Q+ V ++L Sbjct: 370 PPMRTDVIGVADVMEDVAIAYGYDNI-------TYVECKTHGPVTQTPLSKVAQLLRTEM 422 Query: 503 ASRAMMEVVNWSFISKEQSVLFGG---GQRELEILNPISADMSNMRTSLLPGLLKATGRN 559 A E++ S S+ + G + I NP + + R SLLPG+LK N Sbjct: 423 ACAGYTELLTLSLCSRADAFENLGRVDDEVAAHIANPQTMEFQVCRPSLLPGILKTLATN 482 Query: 560 VDRAI-------ADFA----------IFEVSHVYENDTPEGQKYMAAGIRKG-SSGIEGS 601 + + AD + E+ Y + Q+++AA G SSG E Sbjct: 483 KSKPLPQRFFECADVVLLDNERNFPPVLELKTDYASCGARNQRHLAAAHCNGSSSGFESI 542 Query: 602 GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII---KT 658 L + L + + I D E G + PGR+ I + Sbjct: 543 HGLTE---------LALLKLGVPSKAEIAEDYEGDFYTLEKGEDGAFFPGRAMDIILHRA 593 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGF 687 + +G+ G HPN L + + N C + Sbjct: 594 GQAVRIGHLGVIHPNTLKAYDIPN-TCSY 621 >gi|170017482|ref|YP_001728401.1| EMAP domain-containing protein [Leuconostoc citreum KM20] gi|169804339|gb|ACA82957.1| EMAP domain protein [Leuconostoc citreum KM20] Length = 218 Score = 50.1 bits (118), Expect = 0.002, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 4/101 (3%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 S I +VL++ ++PD D + + + +Q+V G+PN++ G+ V A PG+ +P Sbjct: 93 SKLVIGRVLTMAKHPDSDHLHVTTTAVAEDKTLQIVSGSPNMQEGIKVVVAQPGTMMPSG 152 Query: 101 NMIVNVRKIRGIESTGMMCSEKELML--SDDSASIMELPID 139 +I + +RG+ S+GM+ S +EL + + D + LP D Sbjct: 153 AIIWD-GALRGVPSSGMIVSGRELQIPGAPDKPGALVLPED 192 >gi|325967895|ref|YP_004244087.1| phenylalanyl-tRNA synthetase subunit beta [Vulcanisaeta moutnovskia 768-28] gi|323707098|gb|ADY00585.1| phenylalanyl-tRNA synthetase subunit beta [Vulcanisaeta moutnovskia 768-28] Length = 552 Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 119/293 (40%), Gaps = 38/293 (12%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V G+++ +D + L VI ++ V + +R +V DLVE+I YG + Sbjct: 286 VNEYLGLNLSKDDIVNYLLASRHDVIDYGEELIVKIAPYRFNVLHSVDLVEDIAVAYGYE 345 Query: 471 QIKSEPLPLTQVEDKRN-LSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR 529 I E LP + R+ LS+ T +V+ ++ EV+N+ +K+ + QR Sbjct: 346 NIPRE-LPSQPIRGARDGLSV---FTDFVRDLMIGLGFQEVLNYMMSNKDVMIRRTMNQR 401 Query: 530 EL-EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 EL E+ NP S + +R + P L++ RN IFEV Y+ Sbjct: 402 ELVEVENPKSELYTVIRDHIWPQLMEVAARNKALIEGILKIFEVG------------YVI 449 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + + G++ L S D LSV L SL G Sbjct: 450 SPSQNSEVGVKEDLVLSYLISGPEITL-------TDGLSV------LKSLMASQGINYLP 496 Query: 649 HP--GRSGIIKTSAEIV-----LGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 P SG+I+ +A I +G+ E P+++ FGL P+ E+ L I Sbjct: 497 KPCENPSGLIERTACIYVDDKNIGFIMELRPDVIVSFGLEYPVVVSEIRLSEI 549 >gi|255722275|ref|XP_002546072.1| phenylalanyl-tRNA synthetase beta chain [Candida tropicalis MYA-3404] gi|240136561|gb|EER36114.1| phenylalanyl-tRNA synthetase beta chain [Candida tropicalis MYA-3404] Length = 593 Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust. Identities = 128/601 (21%), Positives = 235/601 (39%), Gaps = 129/601 (21%) Query: 155 PIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL- 213 P + + + NR D + + GIA L + + S + + EI + +S+L Sbjct: 50 PQLKIEVPANRYDMLCIEGIA-----QALNEFLGNSESPKYTLNPVKPEISLTIKESTLP 104 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVS-----LDRGYPSHVFD 268 + +A + +RN V + A+ + S L V+ LD P ++ Sbjct: 105 IRQYAASAI--LRNVVLDERSYESFIALQDKLHSNLCRNRTLVAIGTHDLDTLTPPFTYE 162 Query: 269 ASRISDV----LTVRRACSGEKILALDNQEYDL---------SPDNVVIASDGR-IQSIA 314 A D+ L + +GE+++ ++ ++ SP V+ R + S+ Sbjct: 163 ALAPKDINFIPLNQTKEINGEELMEFYEKDKNIGKFLHIIKDSPVYPVMLDANRTVASLP 222 Query: 315 GIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLK 374 II H+ NT +V ++V D K +I F R P Sbjct: 223 PIINSDHSKISLNTRNVWIDVTGTD------KTKTEIVINQLVAMFSRYCK----TPFEI 272 Query: 375 HIVSLILSLCGGTASDICIARNITYKPR----KIVFMNSEVKRLSGIDVPIEDSLRILER 430 V +I G T + N+T PR +I ++NS V G+D E+ ++L++ Sbjct: 273 EPVQIISEHNGETR----VCPNVT--PRTAQAEIPYINSCV----GLDYSGEEISKLLKK 322 Query: 431 LGF---SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-----------SEP 476 + + + + +V +P R D+ + D++E++ YG D +K + P Sbjct: 323 MSLDASTSTSDKEIIDVKIPITRSDILHQCDIMEDVAIAYGYDNLKKTKPQQTESLVAAP 382 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLFG------GGQR 529 LP+ +V D + R+ +S+A +EV+ + S +++ FG G Sbjct: 383 LPVNKVAD-------------ILRLASSQAGYLEVMPLTLSSHDEN--FGWLKQKDDGTT 427 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE----GQ 584 +++ NP + + +RT+LLPG+LK N ++ +FE V ++D E Q Sbjct: 428 AVKLENPKTIEYQVVRTTLLPGILKTIKENRKHSLP-IKVFECGDIVLKDDKLERGAFNQ 486 Query: 585 KYMAAGIRKGSSGIEGSGRL-----------WSDKSEERCRFVDLFDAKADALSVIEPFV 633 + AA +SG E L W +K +E R + + Sbjct: 487 RNWAAVYAGKTSGFEMVQGLLGKIMQTMRTPWLEKPQEDKRRGYWIEEDKE--------- 537 Query: 634 SLDSLRFESGAPSWYHPGRSG-IIKTSAE----IVLGYFGEFHPNILDFFGLSNPICGFE 688 P+++ PGR + SAE V+G G HP +++ F + E Sbjct: 538 ----------NPTFF-PGRGAKVFFRSAENGEGKVIGKLGVLHPEVMNNFDIPYAASSVE 586 Query: 689 V 689 + Sbjct: 587 I 587 >gi|41615263|ref|NP_963761.1| phenylalanyl-tRNA synthetase subunit beta [Nanoarchaeum equitans Kin4-M] gi|40068987|gb|AAR39322.1| NEQ479 [Nanoarchaeum equitans Kin4-M] Length = 507 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 119/551 (21%), Positives = 217/551 (39%), Gaps = 114/551 (20%) Query: 165 RSDCIGVRGIALDL-----VAAGL--GKLKEINISCPLSSESIPLEIKFDLDDSSLCKGF 217 R D V GIA +L + GL K+KE N S + P + + S+ K Sbjct: 48 RIDLWSVFGIARELKGIKGIEEGLPDYKIKEGNYVLYNYSRNRPYVAAAVVRNVSMDKE- 106 Query: 218 AMCCVKGVRNNVAPNWMRQR-LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL 276 + + ++ +A N+ R R A+G+ + + Y +D P+ F + L Sbjct: 107 TLKYIIQMQETLAKNYGRDRKYVAIGIHNFKMIKFPLYYKEVD---PNTKFVPLGYNKEL 163 Query: 277 TVRRACSGEKILALDNQEYD--LSPDNVVIASDGRIQSIAGIIGGKHAG-CDDNTTDVLV 333 T++ EK ++Y + V++ S+G+I S II G ++TTD+ + Sbjct: 164 TLKEILETEK-----GKKYKHLVKYYEVLMDSEGKILSFPPIINSNTVGRIREDTTDLFI 218 Query: 334 EVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI 393 +V G+D + + L IV+ +L + A + I Sbjct: 219 DVT--------------------------GIDERRVHRTLNAIVANLLEIAE-YAETVKI 251 Query: 394 ARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL------RILERLGFSVIGEYDKFEVSVP 447 +N K KI EV IED L +L + + + G +VS Sbjct: 252 IKNNEEKVYKIEKRTMEVNWKD-----IEDWLGIKVEPELLRKARYDIDGN----KVSWL 302 Query: 448 SWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM 507 ++R D+ + D+ E+ + I G D + P + + N ++Q ++++L Sbjct: 303 TYRFDIYDFTDIAEDYMIIKGYDYL---PYQEYKSHGQFNKTIQLYND--IRKLLLGLGA 357 Query: 508 MEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 EV + K + I NP+S++ S +R SL+ LLK N +A + Sbjct: 358 TEVYTIALTDKGI----------IPIKNPVSSNYSYLRDSLIHPLLKFLANNQYKAPIE- 406 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 IFE +Y Y++ S+ S+ ++ A L+ Sbjct: 407 -IFEFGRIYREKPYWSIVYLSL----------------SEDSD--------YNKAASKLA 441 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIV----LGYFGEFHPNILDFFGLSNP 683 + + ++ + G ++ GR +AE V Y GE PN+L+ +G+ P Sbjct: 442 FLLKELGIN-YEIKEGKHKYFLEGR------TAEFVNDKFKAYAGEIDPNVLEKYGIVFP 494 Query: 684 ICGFEVYLDSI 694 + GFE+ ++++ Sbjct: 495 VSGFEIIMENL 505 >gi|251772028|gb|EES52600.1| phenylalanyl-tRNA synthetase, beta subunit [Leptospirillum ferrodiazotrophum] Length = 586 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 100/265 (37%), Gaps = 51/265 (19%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK---------SEPLPLTQVEDK-RNLSLQ 491 FEV P +R D+ D+VE+ L G P P +VE++ R L Sbjct: 335 FEVLQPFYRDDLLGAVDVVEDYLVARGFASFAPVMPRAFTAGSPAPKIKVENRIRTAFLA 394 Query: 492 QSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPG 551 T + +L + + L G + I NP S + +R +LL G Sbjct: 395 MGFTELLSNILTGEPAV-----------TTRLGRSGDFLVRIDNPASLHYAVVRPTLLSG 443 Query: 552 LLKATGRNVDRAIADFAIFEVSHVYE-NDTPEGQKYM------AAGIRKGSSGIEGSGRL 604 LL A R+ R +FEV E + P G + + AA + +GI Sbjct: 444 LLAAESRSA-RHPYPHRLFEVGEAMELSPLPSGDRGLKDLHLAAALVSHPQAGIS----- 497 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 E ++ A+ D V+EP + P Y PGR G+++ + Sbjct: 498 ------ELQGVLEALLARFDQRLVLEP----------ADLPP-YIPGRCGVLRGPRGERI 540 Query: 665 GYFGEFHPNILDFFGLSNPICGFEV 689 GE HP LD +G+ P FE+ Sbjct: 541 AAVGEIHPATLDLWGIRMPTAAFEI 565 >gi|163790760|ref|ZP_02185186.1| putative tRNA-binding domain protein [Carnobacterium sp. AT7] gi|159873940|gb|EDP68018.1| putative tRNA-binding domain protein [Carnobacterium sp. AT7] Length = 203 Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats. Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 4/103 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I +V +PD D +I + + + IQ+VCGA N+ G V A G+ +P N M Sbjct: 96 FVIGEVKECNPHPDSDHLSITQTEIDNGEIIQIVCGASNIAKGQKVVVAKVGAMMP-NGM 154 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSAS--IMELPIDAPVG 143 + ++RG S GM+CS KEL L + S I+ LP A G Sbjct: 155 SIWDGELRGEPSHGMICSAKELNLKNASEEKGILVLPDSATTG 197 >gi|207343139|gb|EDZ70695.1| YLR060Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 590 Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust. Identities = 88/408 (21%), Positives = 169/408 (41%), Gaps = 77/408 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 206 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 259 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 260 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 306 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 307 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 366 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 367 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 413 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 414 FLRQSDNDDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 472 Query: 579 DTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E +++ AA +SG E G L R ++ + A A IE Sbjct: 473 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 530 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNIL 675 E + Y PGR + K AE +G+ G HP ++ Sbjct: 531 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVM 570 >gi|229823040|ref|ZP_04449109.1| hypothetical protein GCWU000282_00335 [Catonella morbi ATCC 51271] gi|229787479|gb|EEP23593.1| hypothetical protein GCWU000282_00335 [Catonella morbi ATCC 51271] Length = 209 Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 3/76 (3%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS--DDS 130 +Q+VCGA N+ G + A PG+ +P+ +I+ ++RG++S GM+CS +EL L ++ Sbjct: 126 LQIVCGAANIEAGQKVLVAQPGAVMPD-GLIIWPGQLRGVDSNGMICSTRELGLDAIENK 184 Query: 131 ASIMELPIDAPVGGRL 146 I L D VG L Sbjct: 185 PGIWVLKDDLAVGTPL 200 >gi|51598768|ref|YP_072956.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia garinii PBi] gi|81609953|sp|Q661A7|SYFB_BORGA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|51573339|gb|AAU07364.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia garinii PBi] Length = 566 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 25/302 (8%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G S K + P +R D + D Sbjct: 287 YFQEEVEFDVKNVNRLLGNNLTLERICLNLKKMGVSSYSRDFKNYIVPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ S+ Sbjct: 347 VIEDVMIGEGLASFYPE---LPKAFTIGRLSALEEFSRNVRNLMMGMGFQEMIYNYMGSR 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKV- 461 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 K + A +G+S L S K F+ ++ + +++++ Sbjct: 462 ------ALKNLDAA--EGTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLNIE 506 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPI 696 + ES A ++Y GR I +G FGE P +L+ FG+ P FEV ++ + + Sbjct: 507 IILRESKA-TFYINGRGADILIEG-FNVGSFGEISPYVLNNFGIFIPCSVFEVNINKL-V 563 Query: 697 SQ 698 SQ Sbjct: 564 SQ 565 >gi|300173068|ref|YP_003772234.1| TRNA-binding domain-containing protein [Leuconostoc gasicomitatum LMG 18811] gi|299887447|emb|CBL91415.1| TRNA binding domain protein [Leuconostoc gasicomitatum LMG 18811] Length = 218 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 S I +V S+ +PD D ++ + +Q+V G+PN+R G+ V A PG+ +P Sbjct: 93 SKLVIGRVKSITAHPDSDHLSVTSTAVSDEKVLQIVSGSPNMREGIKVVVAQPGTMMPSG 152 Query: 101 NMIVNVRKIRGIESTGMMCSEKELML 126 +I + +RG+ S+GM+ S +EL L Sbjct: 153 ALIWD-GALRGVPSSGMIVSGRELQL 177 >gi|323336603|gb|EGA77869.1| Frs1p [Saccharomyces cerevisiae Vin13] gi|323353935|gb|EGA85788.1| Frs1p [Saccharomyces cerevisiae VL3] Length = 595 Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust. Identities = 91/411 (22%), Positives = 170/411 (41%), Gaps = 77/411 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNXDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 578 >gi|9663771|emb|CAC01235.1| putative phenylalanyl-tRNA synthetase chain B [Myxococcus xanthus] Length = 113 Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 1/90 (1%) Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 V RDLA +V +P + +I V + L++D VFDV+ G+ + +G+K++A + + Sbjct: 24 VLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYALRYRSA 83 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D ++ RIV+ V ++ A LR+ Sbjct: 84 ERTLTDVEVNEAHQRIVDEVKQRLGAALRA 113 >gi|151941229|gb|EDN59607.1| mitochondrial phenylalanyl-tRNA synthetase beta subunit [Saccharomyces cerevisiae YJM789] gi|323332513|gb|EGA73921.1| Frs1p [Saccharomyces cerevisiae AWRI796] Length = 595 Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust. Identities = 90/408 (22%), Positives = 169/408 (41%), Gaps = 77/408 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F Sbjct: 211 VIMDSKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFS 264 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GID 418 R D + ++ I+S G + +A N + M+ +K ++ G+D Sbjct: 265 RYCDEPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLD 311 Query: 419 VPIEDSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-- 473 ++ L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 312 QSADEIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKG 371 Query: 474 ---------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVL 523 ++PLP+ +V D + RV +S+A +EV+ + S +++ Sbjct: 372 EKLSNANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFK 418 Query: 524 F----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYEN 578 F +++ NP + + +RT+LLPG+LK N ++ +FE V+++ Sbjct: 419 FLRQSDNDDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKD 477 Query: 579 DTPEGQKYMA---AGIRKG-SSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPF 632 D E + Y A I G +SG E G L R ++ + A A IE Sbjct: 478 DKLERKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE-- 535 Query: 633 VSLDSLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNIL 675 E + Y PGR + K AE +G+ G HP ++ Sbjct: 536 --------EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVM 575 >gi|270001467|gb|EEZ97914.1| hypothetical protein TcasGA2_TC000300 [Tribolium castaneum] Length = 322 Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust. Identities = 61/261 (23%), Positives = 109/261 (41%), Gaps = 28/261 (10%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL 502 +V++P R D+ D+ E++ +G ++I LP T +N + S ++ + Sbjct: 76 KVTIPPTRHDIIHPCDIYEDVAIAFGYNKI-VRTLPKTNTIGSQNPINKLSD--LLRAPI 132 Query: 503 ASRAMMEVVNWSFISKEQ-SVLFGGGQRE----LEILNPISADMSNMRTSLLPGLLKATG 557 A E + +S S++ S G + + I NP + + RT+L+PG+LK Sbjct: 133 AQAGFTEALTFSLCSRDDISTKLGLKSVDEVPAVHISNPKTLEFQVCRTTLIPGILKTIA 192 Query: 558 RNVDRAIADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEER 612 N + IFEVS V D ++ + A ++G E L Sbjct: 193 ANKKMPLP-LKIFEVSDVVIKDPSTEVGARNERRICAVNCNKNAGFEVVHGLLD------ 245 Query: 613 CRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSG-IIKTSAEIVLGYFGEFH 671 + + L + + + + L+ + S + PGR +I +EI G G H Sbjct: 246 -KIMMLLEVPWNPNKTPKGYY----LQACEVSDSAFFPGRCAKVICDGSEI--GKIGVLH 298 Query: 672 PNILDFFGLSNPICGFEVYLD 692 PN+L F L+NP E+ ++ Sbjct: 299 PNVLHKFELTNPCSCVEINIE 319 >gi|166007369|pdb|3BU2|A Chain A, Crystal Structure Of A Trna-Binding Protein From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Syr77 gi|166007370|pdb|3BU2|B Chain B, Crystal Structure Of A Trna-Binding Protein From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Syr77 gi|166007371|pdb|3BU2|C Chain C, Crystal Structure Of A Trna-Binding Protein From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Syr77 gi|166007372|pdb|3BU2|D Chain D, Crystal Structure Of A Trna-Binding Protein From Staphylococcus Saprophyticus Subsp. Saprophyticus. Northeast Structural Genomics Consortium Target Syr77 Length = 199 Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats. Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 3/86 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F + V + +++PD D ++L +D +++Q+VCGAPNV G V A G+ P + Sbjct: 93 FVVGYVETKDKHPDADKLSVLSVDVAT-EKLQIVCGAPNVEAGQKVVVAKVGAVXPSGXV 151 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD 128 I + ++RG+ S+G +CS KEL L + Sbjct: 152 IKDA-ELRGVASSGXICSXKELGLPN 176 >gi|110667027|ref|YP_656838.1| phenylalanyl-tRNA synthetase subunit beta [Haloquadratum walsbyi DSM 16790] gi|109624774|emb|CAJ51180.1| phenylalanine--tRNA ligase beta chain [Haloquadratum walsbyi DSM 16790] Length = 629 Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust. Identities = 66/283 (23%), Positives = 109/283 (38%), Gaps = 63/283 (22%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRV 501 + VS+P +R DV DL++++ R YG D+++ + V + S ++ TR Sbjct: 376 YVVSIPPYRVDVLHPLDLIDDVGRAYGFDKLEPRYPDIGTVGGRHERSRLEAVTRTTLTG 435 Query: 502 LASRAMM--------EVVNWSFISKEQSVLFG--------GGQRELEILNPISADMSNMR 545 L ++ EV N S F G EI +P S D + +R Sbjct: 436 LGFEDLLNFHLTNKAEVYNRMRTSPLSPAAFNSTPDDIDLGSAPPAEITDPYSGDYTILR 495 Query: 546 TSLLPGLLKATGRNVDRAIA-DFAIFEV---------SHVYENDTPEGQKYMAAGIRKGS 595 +LP L++ N R D A V +HV E ++++A + + Sbjct: 496 PWILPSLVQVLENNTHRTYPQDLAEVGVVANRDDSVNTHVAE------RRHVAGAVARHD 549 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----G 651 + E DAKA +V F + +L+ P HP G Sbjct: 550 ATYE--------------------DAKAALQAVCREFDA--TLQ----TPPTTHPSFIDG 583 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 R+ I + + +G GE HP +L L+ P+ FE L ++ Sbjct: 584 RTAAIIIN-DTSVGVIGEIHPEVLVEHDLAVPVAAFEFELAAL 625 >gi|307596065|ref|YP_003902382.1| phenylalanyl-tRNA synthetase subunit beta [Vulcanisaeta distributa DSM 14429] gi|307551266|gb|ADN51331.1| phenylalanyl-tRNA synthetase, beta subunit [Vulcanisaeta distributa DSM 14429] Length = 551 Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust. Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 22/252 (8%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 V V +R +V DLVE++ YG + I E LP V+ RN + ++ ++ Sbjct: 319 VKVAPYRFNVLHVVDLVEDVAVAYGYENIPRE-LPPQPVKGVRNR--LGAFADLIRDLMV 375 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQREL-EILNPISADMSNMRTSLLPGLLKATGRNVDR 562 EV+N+ +K+ + +R L E+ NP S + +R + P L++ RN Sbjct: 376 GLGFQEVLNYMMSNKDVMIKRTMYERNLVEVENPKSELYTVIRDYIWPQLMEVAARNKAL 435 Query: 563 AIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK 622 IFEV Y+ + ++ G++ + L S D Sbjct: 436 IEGGLKIFEVG------------YVVSPSQESEVGVKENLVLSYLISGPEITLTDGLSVL 483 Query: 623 ADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSN 682 L+ + SL ++ SG P R+ I + G+ E P+++ FGL Sbjct: 484 KSLLTSLGINYSLKPCKYMSGLPE-----RTACIYIGDRNI-GFVMEMRPDVIVAFGLEY 537 Query: 683 PICGFEVYLDSI 694 P+ EV LD + Sbjct: 538 PVVVSEVKLDEL 549 >gi|321463870|gb|EFX74882.1| hypothetical protein DAPPUDRAFT_214647 [Daphnia pulex] Length = 589 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 88/422 (20%), Positives = 151/422 (35%), Gaps = 88/422 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ S+G + S+ II G+H+ +T +V +E Sbjct: 222 VIKDSNGVVLSMPPIINGEHSKITLDTKNVFIECT------------------------- 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS-DICIARNITYKPRKIVFMNSEVKRLS----- 415 DL VL +V + CG + +IC K + + +++S Sbjct: 257 -ATDLTKASIVLDTLVCMFSRYCGDQFTVEICEVETPEGKINNYPILKNRHEKISVDKIN 315 Query: 416 ---GIDVPIEDSLRILERLGFSVIGE-YDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 GI+ ++ +L R+ + E V +P R D+ D+ E++ +G + Sbjct: 316 TMVGINEKADEIANLLTRMCLTATVEGTGSISVEIPPTRHDIIHACDVYEDVAIAFGYNN 375 Query: 472 I-KSEP--------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV 522 I K+ P PL ++ D+ ++ LA E + +S SKE Sbjct: 376 ITKTLPKTNTIASQFPLNKLSDQ------------LRDQLAQAGFTEALTFSLCSKED-- 421 Query: 523 LFGGGQRE-------LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 R+ + + NP + + RT+LL GLLK N + +FEVS V Sbjct: 422 -ISEKLRKPLNSVPAVHVSNPKTLEFQVARTTLLSGLLKTIAANRKMPLP-MKLFEVSDV 479 Query: 576 YENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIE 630 D+ + + A S G E L R + L + D Sbjct: 480 VVKDSQRDVGARNCRNLCAVYYNKSPGFELVHGLLD-------RLMQLLEVPLDQSGSKG 532 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 F+ + + + PGR I A V+G G HP+++ F L+ P E Sbjct: 533 YFL-------KPCEDATFFPGRCAQI-IFAGTVVGIVGVLHPDVVTSFDLNLPCSALEFN 584 Query: 691 LD 692 ++ Sbjct: 585 IE 586 >gi|85680331|gb|ABC72360.1| phenylalanyl-tRNA synthetase beta chain [Haloquadratum walsbyi] Length = 629 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/283 (22%), Positives = 111/283 (39%), Gaps = 63/283 (22%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV--- 498 + VS+P +R DV DL++++ R YG D+++ + V + S ++ TR Sbjct: 376 YVVSIPPYRVDVLHPLDLIDDVGRAYGFDKLEPRYPDIGTVGGRHERSRLEAVTRTTLTG 435 Query: 499 -------------KRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMR 545 K + +R M ++ + + + G EI +P S D + +R Sbjct: 436 LGFEDLLNFHLTNKAAVYNRMRMSPLSPATFNSTTDDIDLGSAPPAEITDPYSGDYTILR 495 Query: 546 TSLLPGLLKATGRNVDRAIA-DFAIFEV---------SHVYENDTPEGQKYMAAGIRKGS 595 +LP L++ N R D A V +HV E ++++A + + Sbjct: 496 PWILPSLVQVLENNTHRTYPQDLAEVGVVANRDDSVNTHVAE------RRHVAGAVARHD 549 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP----G 651 + E DAKA +V F + +L+ P HP G Sbjct: 550 ATYE--------------------DAKAALQAVCREFDA--TLQ----TPPTTHPSFIDG 583 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 R+ I + + +G GE HP +L L+ P+ FE L ++ Sbjct: 584 RTAAIIIN-DTSVGVIGEIHPEVLVEHDLAVPVAAFEFELAAL 625 >gi|66360259|ref|XP_627227.1| phenylalanyl-tRNA synthetase beta chain [Cryptosporidium parvum Iowa II] gi|46228839|gb|EAK89709.1| phenylalanyl-tRNA synthetase beta chain [Cryptosporidium parvum Iowa II] Length = 679 Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust. Identities = 108/456 (23%), Positives = 181/456 (39%), Gaps = 90/456 (19%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS----- 356 VV S+G + S+ +I G + NT +V +EV D +R+ L I S Sbjct: 239 VVTDSNGIVLSVPPLINGSQSKITLNTKNVFIEVTATD---YSRASIVLNQIVSSFSMYC 295 Query: 357 RYRFE-RGVDLQ---GMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVK 412 + +FE V ++ P H + L G + N+ + + V SE Sbjct: 296 KNKFEIEPVKVEYEHSTYPPFPHKYEV---LANGNYH--VVTPNL--ERLEFVVKASEAS 348 Query: 413 RLSGIDVPIEDSL---RILERLGF--SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIY 467 L GI+ PI D + +L ++ +I + + + VP R D+ D++E+I + Sbjct: 349 NLLGIN-PILDPIVTQSLLRKMMIDSEIIKDSESLKCFVPINRSDILHPVDIIEDIGISF 407 Query: 468 GVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK--------- 518 G + I+ + ++ DK +L +Q VKR L+ + E +NW+ Sbjct: 408 GFNNIELKKSRFYEL-DKSSLMAEQ-----VKRELSLLGISESLNWALCKHSDCFESLFR 461 Query: 519 ----------EQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 E V + + + + +++ +RT+L+ LLK N + Sbjct: 462 TENIKLKNLFESEVQYNLNCPPVVVKDAKTSEFEILRTTLIQSLLKTIASNKSLPLPQ-K 520 Query: 569 IFEVSHV--YENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAK---A 623 IFEV V +N+TP G + + GSG EE F+D +K Sbjct: 521 IFEVGDVVILDNNTPSGSR-NDKRVSIAYCNSSGSGL------EEIHGFLDQLLSKLGLV 573 Query: 624 DALSVIEP------FVSLDSLRFESGAPSWYHPGRS-----------------GIIKT-- 658 S+ EP + + SL E PS+ P RS I KT Sbjct: 574 AEYSLNEPNSIHPNIIGMYSLS-EVNDPSFL-PTRSVKITIQKVELNSCLKSIDIEKTML 631 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + ++V+G G HP +L+ F L+ P E+ L+ I Sbjct: 632 NEQVVIGIMGVIHPKVLNNFSLTLPTSVLELRLEPI 667 >gi|27497155|gb|AAO17345.1| phenylalanyl-tRNA synthetase beta chain [Neisseria polysaccharea] Length = 57 Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNP 56 M+F+ SWLK DT++S +K+ LT GLEVE++D A S + +V SVE++P Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVNSVEKHP 57 >gi|167948157|ref|ZP_02535231.1| phenylalanyl-tRNA synthetase subunit beta [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 79 Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 317 IGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQ 367 +GG+ +G T+D+L+E A + P I + G+ TDS +RFERGVD Q Sbjct: 1 MGGEGSGVSAETSDILLESAFFSPTAIIGKARAYGLHTDSSHRFERGVDPQ 51 >gi|313885008|ref|ZP_07818760.1| tRNA binding domain protein [Eremococcus coleocola ACS-139-V-Col8] gi|312619699|gb|EFR31136.1| tRNA binding domain protein [Eremococcus coleocola ACS-139-V-Col8] Length = 209 Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 11/128 (8%) Query: 14 TDVSLEKICDTLTSIGLEVE-KVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKH 70 +D + KI D + + G + + + DN SP F + V + D D ++ + + G Sbjct: 69 SDDQVAKINDLIQAAGFDTQIESDN----SPKFVVGYVEECRPHEDSDHLSVTQTNVG-D 123 Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLS--D 128 + +Q+VCGA N+ GL + A PG+ +P + I+ ++R ++S GM+CS +EL L+ + Sbjct: 124 ESLQIVCGAANIDQGLKVIVAKPGAVMP-SGKIIWPGQLRNVDSMGMICSTRELGLTQIE 182 Query: 129 DSASIMEL 136 D I EL Sbjct: 183 DLPGIWEL 190 >gi|326803161|ref|YP_004320979.1| tRNA binding domain protein [Aerococcus urinae ACS-120-V-Col10a] gi|326651215|gb|AEA01398.1| tRNA binding domain protein [Aerococcus urinae ACS-120-V-Col10a] Length = 177 Score = 48.9 bits (115), Expect = 0.004, Method: Composition-based stats. Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%) Query: 15 DVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQ 74 D +E+I G E K+ N + +++ + E + L + + G Q Sbjct: 39 DAQIEQINQLFYEQGFETIKISNEPRIVVGKVLECVDHENSDHLH--VTQTQVGPAGVQQ 96 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDD 129 +VCGA N+ G V A G+ +P N I+ ++RG++S GM+CS EL L D Sbjct: 97 IVCGASNIDQGQTVVVALSGAVMP-NGQIIWPGELRGVKSNGMICSAYELGLDPD 150 >gi|330834030|ref|YP_004408758.1| phenylalanyl-tRNA synthetase subunit beta [Metallosphaera cuprina Ar-4] gi|329566169|gb|AEB94274.1| phenylalanyl-tRNA synthetase subunit beta [Metallosphaera cuprina Ar-4] Length = 543 Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust. Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 38/290 (13%) Query: 409 SEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 ++++ GI++ + +++L ++ D V+VP +R D+ D+ E++ YG Sbjct: 278 ADIRERLGINLSGDQVVKLLRKMRMEAEVRGDSVVVNVPPYRVDIMNYTDIAEDVGMAYG 337 Query: 469 VDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 + E ++V + +L S R ++ L +EV + + I + G+ Sbjct: 338 YENFDLEK---SRVYETGHLFSITSLYRKLRISLVGAGFVEVYSLNLIKSS----YQKGE 390 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 ++I NPIS + ++R SL L RN + IFE+ V D + Y Sbjct: 391 Y-VKISNPISIEYDSIRNSLAWNSLLFLSRN-QHSRFPVRIFEIGDVVRRDNAKDTGY-- 446 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWY 648 + E V + D++ + +++ + L PS+ Sbjct: 447 --------------------TNETMLSVAIMDSRV-SYEMLQAPIHQVLLNLTGTVPSYK 485 Query: 649 HPGRSGIIK-TSAEIVLGY-----FGEFHPNILDFFGLSNPICGFEVYLD 692 I+ SAEI LGY GE +P++L+ FGL P+ E+ L+ Sbjct: 486 AKDNDLFIRGRSAEIWLGYEKIGILGEINPSVLNEFGLVYPVLFSEISLN 535 >gi|184155797|ref|YP_001844137.1| hypothetical protein LAF_1321 [Lactobacillus fermentum IFO 3956] gi|260663486|ref|ZP_05864376.1| EMAP domain-containing protein [Lactobacillus fermentum 28-3-CHN] gi|183227141|dbj|BAG27657.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956] gi|260552027|gb|EEX25080.1| EMAP domain-containing protein [Lactobacillus fermentum 28-3-CHN] Length = 210 Score = 48.1 bits (113), Expect = 0.005, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V +E +P D I ++D G + +Q+VCG+PN+ + + A G+ +P Sbjct: 93 LSPKFVVGYVSEMEDHPKSDHLHITKVDLGD-ETVQIVCGSPNIENHVKVIVAKVGAMMP 151 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDY 149 + I+ ++ G+ES GM+C+ +EL L + D + LP D G D+ Sbjct: 152 -SGQIIWPGELVGVESDGMICAGRELNLKNAPDKPGCVILPADFGQPGDAFDF 203 >gi|20094256|ref|NP_614103.1| phenylalanyl-tRNA synthetase subunit beta [Methanopyrus kandleri AV19] gi|24418713|sp|Q8TX56|SYFB_METKA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|19887293|gb|AAM02033.1| Phenylalanyl-tRNA synthetase beta subunit [Methanopyrus kandleri AV19] Length = 590 Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust. Identities = 129/601 (21%), Positives = 217/601 (36%), Gaps = 135/601 (22%) Query: 156 IIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCP---LSSESIPLEIKFDLDDSS 212 +I+ PNR D V G VA L I P + + ++ + D+ Sbjct: 45 VIETEFFPNRPDLYSVEG-----VARALKGFLGIETGIPEYNVRRSDVEARVEESVLDAR 99 Query: 213 LCKGFAMCCVKGVRN------------NVAPNWM--RQRLKA-VGLRSISALVDITNYVS 257 C A+ V+GV +W+ R R KA +G+ A+ Y Sbjct: 100 PC--LAVAVVRGVEFEDERDLEHLMEFQEHLHWVIGRDRKKAAIGIHDFEAVEPPLRYFL 157 Query: 258 LDRGYPSHVFD-----ASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQS 312 D S F+ ++ +RR G + L +S ++A + + S Sbjct: 158 ADPNDRSWAFEPLDHPGEEMTPAEVLRRHEKGRQYAHL------VSDGAPILADEEGVIS 211 Query: 313 IAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPV 372 +I + +TTD+L++V G D + ++ Sbjct: 212 FPPVINSERTRVTQDTTDLLIDVT--------------------------GTDWRSVLDA 245 Query: 373 LKHIVSLILSLCGGT--ASDICIARNITYKPRKIVFMN---SEVKRLSGIDVPIEDSLRI 427 L H++ L+ G +I A T ++ + SE ++L GID+ E + Sbjct: 246 L-HVIVCNLAERGAEILTVEILGAYERTTPTMELDVWDVPVSEARKLLGIDLSGEQLEEL 304 Query: 428 LERLGFSVI----GEYDKFEVSVP-------SWRQ--------------------DVEEK 456 LER I GE + E +P WR+ ++ + Sbjct: 305 LERARHGAIFVPEGERELREYPLPDVYHIEADWREIPPILYEEDVVRVFVGPRRTNILHE 364 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 DL+E+ +Y D+ EP + ++ V+ LA +EV + + I Sbjct: 365 WDLIEDAGIMYNYDRF--EPT-VPDFYTPSRADREREFINVVRDTLARMKFVEVNSLTLI 421 Query: 517 SKEQS---VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVS 573 S E++ + R +++ NPI + + +RT +LP L++ N R +FE+ Sbjct: 422 SPEENYRKMRLEPDGRAVKLANPIQKEYTIVRTWILPSLMRFLADNKHRPYPQ-RVFELG 480 Query: 574 HVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 V E D E + A K + I G G +S+ SV+E + Sbjct: 481 EVIERD--EDAETGAKDRWKLALAIAGPGVGFSEIK-----------------SVVEALL 521 Query: 634 -SLDSLRFESGAPSWYHPGRSGIIKTSAEIV-----LGYFGEFHPNILDFFGLSNPICGF 687 LD +E RS I A ++ LG+FGE HP +L F L P+ G Sbjct: 522 RELDVTGWEITE----RKHRSFINGRCAAVLADGRELGFFGEIHPEVLTEFDLEVPVVGG 577 Query: 688 E 688 E Sbjct: 578 E 578 >gi|284931599|gb|ADC31537.1| tRNA-binding domain protein [Mycoplasma gallisepticum str. F] Length = 211 Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 1/87 (1%) Query: 42 SPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENN 101 SPF I +V+ V P+ +D K Q + +VCG NV G+ V I Sbjct: 92 SPFVIGQVIKVNPIPNTHLNHCLVDIAKEQPLSIVCGGSNVSEGIKVVVVKVDGFINTGK 151 Query: 102 MIVNVRKIRGIESTGMMCSEKELMLSD 128 I ++ +ES+GM+CSE EL L+D Sbjct: 152 HI-KRSELFNLESSGMICSENELGLTD 177 >gi|171693015|ref|XP_001911432.1| hypothetical protein [Podospora anserina S mat+] gi|170946456|emb|CAP73257.1| unnamed protein product [Podospora anserina S mat+] Length = 605 Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust. Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 19/284 (6%) Query: 426 RILERLGFSVIGEYD-KF-EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVE 483 ++L ++ + D KF +V+VP R DV D++E++ YG + + P V Sbjct: 321 KLLSKMAYKAEPSSDPKFVKVTVPPTRADVLHPCDVMEDVAIAYGFNSLPRSS-PNRSVT 379 Query: 484 DKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISA 539 + L + + + V+ A +EV+ S E++ + G+ +++ NP + Sbjct: 380 IGKPLMINK-LSDIVRTECAMAGWVEVMPLILCSHEENFEWLNRVDDGKTAVKLANPRTV 438 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE----GQKYMAAGIRKGS 595 + RTSLLPGLLK N + I V+++++ E ++ AA + Sbjct: 439 EYQVARTSLLPGLLKTLSENKAMKLPLQIIESADVVFKDESLERKARNERRWAAAYYGKT 498 Query: 596 SGIE-GSGRLWSDKSEERCRFV---DLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 SG E G L + + FV + + K+ +V E D + + G Sbjct: 499 SGFEIVHGLLDRVMTMLKVAFVTHEEGLEGKSIDYAVKENPSKADGYFIQEIDEPTFFKG 558 Query: 652 RSGII--KTSAEIV-LGYFGEFHPNILDFFGLSNPICGFEVYLD 692 R+ I + E+ +G G HP +L+ F L P+ E+ L+ Sbjct: 559 RAAAIYVRLGGELKRIGELGVLHPTVLEKFDLRYPVSTLEINLE 602 >gi|227515609|ref|ZP_03945658.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus fermentum ATCC 14931] gi|227086039|gb|EEI21351.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus fermentum ATCC 14931] Length = 200 Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats. Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 6/113 (5%) Query: 41 LSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 LSP F + V +E +P D I ++D G + +Q+VCG+PN+ + + A G+ +P Sbjct: 83 LSPKFVVGYVSEMEDHPKSDHLHITKVDLGD-ETVQIVCGSPNIENHVKVIVAKVGAMMP 141 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRLSDY 149 + I+ ++ G+ES GM+C+ +EL L + D + LP D G D+ Sbjct: 142 -SGQIIWPGELVGVESDGMICAGRELNLKNAPDKPGCVILPADFGQPGDAFDF 193 >gi|219684163|ref|ZP_03539107.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia garinii PBr] gi|219672152|gb|EED29205.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia garinii PBr] Length = 566 Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 24/298 (8%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G S K + P +R D + D Sbjct: 287 YFQEEVKFDVKNVNRLLGTNLTLERICLNLKKMGVSSYSRDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + L + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLASFYPE---LPKAFTIGRLGALEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV V Sbjct: 404 KDFIDKMKIDDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKVA 462 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D + G+S L S K F+ ++ + +++++ Sbjct: 463 LKDLNAAE---------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLNIE 506 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ES A ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 507 INLRESKA-TFYINGRGADILIEG-FNVGSFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|327439193|dbj|BAK15558.1| EMAP domain [Solibacillus silvestris StLB046] Length = 204 Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 73/131 (55%), Gaps = 11/131 (8%) Query: 18 LEKICDTLTSIGLEVE-KVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQ 74 +EKI L + G E+ VD SP F + V S E++P+ D ++ +++ G + +Q Sbjct: 72 VEKIEAALKANGAEISLDVD----FSPKFVVGYVESKEKHPNADKLSVCKVNVGD-ETLQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDDSAS 132 +VCGAPNV G V A G+ +P + +++ +RG +S GM+CS +EL + + + Sbjct: 127 IVCGAPNVDAGQKVVVAKVGAVMP-SGLLIKEGNLRGEDSFGMLCSARELAIPGAPEVKG 185 Query: 133 IMELPIDAPVG 143 I+ L A VG Sbjct: 186 ILVLEDSAEVG 196 >gi|224531862|ref|ZP_03672494.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia valaisiana VS116] gi|224511327|gb|EEF81733.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia valaisiana VS116] Length = 566 Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust. Identities = 72/301 (23%), Positives = 129/301 (42%), Gaps = 30/301 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G D+ +E L+++G S K V P +R D + D Sbjct: 287 YFQEEVEFNVKNVNRLLGSDLTLERICLNLKKMGVSSYSRDLKNYVIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E+V ++++ Sbjct: 347 VIEDVMIGEGLASFHPE---LPKAFTVGRLSDLEEFSRNVRNLMVGMGFQEMV-YNYMGS 402 Query: 519 EQSVLFGGGQRELEIL---NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 ++ + +L L NP++ + +R S++P LLK+ + + IFEV V Sbjct: 403 KKDFIDRMNVNDLNFLKVSNPMTENYEYIRASIIPNLLKSESISSNFPYPH-KIFEVGKV 461 Query: 576 -YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFV 633 +N DT E G+S L S K F+ ++ + ++ Sbjct: 462 ALKNLDTIE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYL 503 Query: 634 SLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 +++ ES A + Y GR I +G FGE P +L+ FG+ P FEV +D Sbjct: 504 NIEINLRESKA-TIYINGRGADILIKG-FNVGSFGEISPYVLNNFGIFIPCSVFEVNIDK 561 Query: 694 I 694 + Sbjct: 562 L 562 >gi|146179081|ref|XP_001020513.2| phenylalanyl-tRNA synthetase, beta subunit family protein [Tetrahymena thermophila] gi|146144551|gb|EAS00268.2| phenylalanyl-tRNA synthetase, beta subunit family protein [Tetrahymena thermophila SB210] Length = 610 Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust. Identities = 91/427 (21%), Positives = 176/427 (41%), Gaps = 70/427 (16%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S+ + S+ II G H+ T +V +E D A N + S Y E Sbjct: 214 VILDSNNVVCSLPPIINGDHSKIKLTTKNVFIESTATDYTR-ALIALNCLVAAFSEYCAE 272 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 + + + +DI I KI +NS + I+V Sbjct: 273 PYT-----------VEEVEIHYEEENRTDITPQFTINKFQTKISHLNS----VGTINVTA 317 Query: 422 EDSLRILERLGFSV-IGEYDKFEVSVPSWR--------------------QDVEEKADLV 460 E + ++LER+ + + D+ EV+VP R D+ ++ D++ Sbjct: 318 EQACKLLERMSLTAKVLNNDEIEVAVPITRGGNNYKKTKYEINYIFKINVTDILQECDII 377 Query: 461 EEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE- 519 E++ YG IK+ LP T K+ L + S ++ +A+ E +N+ +S++ Sbjct: 378 EDVCIAYGFKNIKA-VLPKTPTVGKQLLLNKMSDL--IREEIAAAGYKEGLNFVLVSRDD 434 Query: 520 --QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + + ++ + I NP + + S RT+LLPG LK N I ++FEV V Sbjct: 435 LTKKLKKENDEQMIIIDNPKTEEFSVGRTTLLPGCLKWLSSNKKNKIP-ISMFEVGDVIL 493 Query: 578 NDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDS 637 D E ++ R+ + ++++ + E +++ D + +++ V+LDS Sbjct: 494 KD--ETRETNTRNERRLCA-------IYTNHNSE----LEVVHGLLDYI-MLKLMVNLDS 539 Query: 638 L-------RFE---SGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 R+ S P+++ ++ + +I G G HP+++ F P+ Sbjct: 540 TGTCKAERRYRLVPSDEPTYFLDRQAHVYYNDKKI--GNLGILHPDVVKNFEWKYPVSVL 597 Query: 688 EVYLDSI 694 E+ L+ + Sbjct: 598 ELNLEPL 604 >gi|71893622|ref|YP_279068.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma hyopneumoniae J] gi|93140703|sp|Q4AA64|SYFB_MYCHJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71851749|gb|AAZ44357.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyopneumoniae J] Length = 718 Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 19/192 (9%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+L LK + + S +K+ D+L ++G EV+++ +S ++L + +NP+ D Sbjct: 1 MLFSLRRLKKLANLEAFSDQKVIDSLINLGFEVDQITKLNEISGIKFGQILEIRKNPEAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D K +EIQ A NV + PGS N +K+RG S Sbjct: 61 NLWICKVQFAD--KIREIQ--TAAKNVIENKQVLAFIPGS--KSGNTTFLAKKLRGHISE 114 Query: 116 GMMCSEKELMLSD-------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+ S EL + D ++ PI L LEL D I+D+ L NR D Sbjct: 115 GMLISAVELGFNKHLLNSELDQGVLVFDPIFDLESNPLK-VLELDDLILDIKLLWNRPDG 173 Query: 169 IGVRGIALDLVA 180 +A +L A Sbjct: 174 NSYLVLANELAA 185 Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 18/167 (10%) Query: 409 SEVKRLSGIDVPIEDSLR---ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +E+K + G+++ ED + ILE++G++ +D S P +R D+E AD + LR Sbjct: 396 NELKEILGLELSQEDISKTNLILEKIGYN----FDNTSFSPPFYRVDIEFFADYAADFLR 451 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG++++K L QV+ K + VK L + E ++ ISKE++ F Sbjct: 452 FYGLEKLKD--CKLEQVKAK----IPNPDFEPVK--LKTLGYYETNSFLLISKEEN--FN 501 Query: 526 GGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + ++L S + + +R SL L K T N R I + +++E Sbjct: 502 PLELKSQDLLTFPSQEHTKIRYSLAWQLAKITKYNQKRKITEISLYE 548 >gi|58264934|ref|XP_569623.1| phenylalanyl-tRNA synthetase beta chain [Cryptococcus neoformans var. neoformans JEC21] gi|57225855|gb|AAW42316.1| phenylalanyl-tRNA synthetase beta chain, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 632 Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 13/194 (6%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEK 456 +PR +S + +G+ + ++ +L R+ S D +V VP R D+ + Sbjct: 299 EPRATTASSSYINAATGLALSRQEICTLLTRMSLSATPSPSNEDLLDVLVPCTRPDILHE 358 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVKRVLASRAMMEVVNWSF 515 D++E+ YG +++ E +P T K + ++ +++ A +E + Sbjct: 359 CDIMEDAAIAYGFNKLPRE-MPTTNTVAK---AFPVNKLGDIIRKECAMAGWVEALPLIL 414 Query: 516 ISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S +++ + G + + NP S + +RTSLLPG+LK T R IFE Sbjct: 415 CSHDENFAWLNRPDPGHYAVHLANPKSLEYQVVRTSLLPGMLK-TARENKALPLPMKIFE 473 Query: 572 VSHVYENDTPEGQK 585 VS V D+ E ++ Sbjct: 474 VSDVAIQDSTEERQ 487 >gi|72080613|ref|YP_287671.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma hyopneumoniae 7448] gi|93140702|sp|Q4A891|SYFB_MYCH7 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|71913737|gb|AAZ53648.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyopneumoniae 7448] Length = 718 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 19/192 (9%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+L LK + + S +K+ D+L ++G EV+++ +S ++L + +NP+ D Sbjct: 1 MLFSLRRLKKLANLEAFSDQKVIDSLINLGFEVDQITKLNEISGIKFGQILEIRKNPEAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D K +EIQ A NV + PGS N +K+RG S Sbjct: 61 NLWICKVQFAD--KIREIQTT--AKNVIENKQVLAFIPGS--KSGNTTFLAKKLRGHISE 114 Query: 116 GMMCSEKELMLSD-------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+ S EL + D ++ PI L LEL D I+D+ L NR D Sbjct: 115 GMLISAAELGFNKHLLNSELDQGVLVFDPIFDLESNPLK-VLELDDLILDIKLLWNRPDG 173 Query: 169 IGVRGIALDLVA 180 +A +L A Sbjct: 174 NSYLVLANELAA 185 Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 18/167 (10%) Query: 409 SEVKRLSGIDVPIEDSLR---ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +E+K + G+++ ED + ILE++G++ +D S P +R D+E AD + LR Sbjct: 396 NELKEILGLELSQEDISKTNLILEKIGYN----FDNTSFSPPFYRVDIEFFADYAADFLR 451 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG++++K L QV+ K + VK L + E ++ ISK++ F Sbjct: 452 FYGLEKLKD--CKLEQVKAK----IPNPDFEPVK--LKTLGYYETNSFLLISKKED--FN 501 Query: 526 GGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + ++L S + + +R SL L K T N R I + ++E Sbjct: 502 PLELKSQDLLTFPSQEHTKIRYSLAWQLAKITKYNQKRKITEINLYE 548 >gi|219685132|ref|ZP_03539952.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia garinii Far04] gi|219673228|gb|EED30247.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia garinii Far04] Length = 566 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 24/298 (8%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G S K + P +R D + D Sbjct: 287 YFQEEVEFDVKNVNRLLGTNLTLERICLNLKKMGVSSYSRDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + L + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLASFYPE---LPKAFTIGRLGALEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV V Sbjct: 404 KDFIDKMKIDDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKVA 462 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 D + G+S L S K F+ ++ + +++++ Sbjct: 463 LKDLNAAE---------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLNIE 506 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ES A ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 507 INLRESKA-TFYINGRGADILIEG-FNVGSFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|134109461|ref|XP_776845.1| hypothetical protein CNBC3360 [Cryptococcus neoformans var. neoformans B-3501A] gi|50259525|gb|EAL22198.1| hypothetical protein CNBC3360 [Cryptococcus neoformans var. neoformans B-3501A] Length = 632 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 47/194 (24%), Positives = 87/194 (44%), Gaps = 13/194 (6%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEK 456 +PR +S + +G+ + ++ +L R+ S D +V VP R D+ + Sbjct: 299 EPRATTASSSYINAATGLALSRQEICTLLTRMSLSATPSPSNEDLLDVLVPCTRPDILHE 358 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVKRVLASRAMMEVVNWSF 515 D++E+ YG +++ E +P T K + ++ +++ A +E + Sbjct: 359 CDIMEDAAIAYGFNKLPRE-MPTTNTVAK---AFPVNKLGDIIRKECAMAGWVEALPLIL 414 Query: 516 ISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S +++ + G + + NP S + +RTSLLPG+LK T R IFE Sbjct: 415 CSHDENFAWLNRPDPGHYAVHLANPKSLEYQVVRTSLLPGMLK-TARENKALPLPMKIFE 473 Query: 572 VSHVYENDTPEGQK 585 VS V D+ E ++ Sbjct: 474 VSDVAIQDSTEERQ 487 >gi|312601249|gb|ADQ90504.1| Phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyopneumoniae 168] Length = 718 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 19/192 (9%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+L LK + + S +K+ D+L ++G EV+++ +S ++L + +NP+ D Sbjct: 1 MLFSLRRLKKLANLEAFSDQKVIDSLINLGFEVDQITKLNEISGIKFGQILEIRKNPEAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D K +EIQ A NV + PGS N +K+RG S Sbjct: 61 NLWICKVQFAD--KIREIQ--TAAKNVIENKQVLAFIPGS--KSGNTTFLAKKLRGHISE 114 Query: 116 GMMCSEKELMLSD-------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+ S EL + D ++ PI L LEL D I+D+ L NR D Sbjct: 115 GMLISAVELGFNKHLLNSELDQGVLVFDPIFDLESNPLK-VLELDDLILDIKLLWNRPDG 173 Query: 169 IGVRGIALDLVA 180 +A +L A Sbjct: 174 NSYLVLANELAA 185 Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 18/167 (10%) Query: 409 SEVKRLSGIDVPIEDSLR---ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +E+K + G+++ ED + ILE++G++ +D S P +R D+E AD + LR Sbjct: 396 NELKEILGLELSQEDISKTNLILEKIGYN----FDNTSFSPPFYRVDIEFFADYAADFLR 451 Query: 466 IYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFG 525 YG++++K L QV+ K + VK L + E ++ ISKE++ F Sbjct: 452 FYGLEKLKD--CKLEQVKAK----IPNPDFEPVK--LKTLGYYETNSFLLISKEEN--FN 501 Query: 526 GGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + ++L S + + +R SL L K T N R I + ++E Sbjct: 502 PLELKSQDLLTFPSQEHTKIRYSLAWQLAKITKYNQKRKITEINLYE 548 >gi|149246281|ref|XP_001527610.1| phenylalanyl-tRNA synthetase beta chain [Lodderomyces elongisporus NRRL YB-4239] gi|146447564|gb|EDK41952.1| phenylalanyl-tRNA synthetase beta chain [Lodderomyces elongisporus NRRL YB-4239] Length = 591 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 71/320 (22%), Positives = 127/320 (39%), Gaps = 51/320 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ ++ + S+ II H+ NT +V ++V D K +I F Sbjct: 209 VMLDANRTVASLPPIINSDHSKITLNTKNVWIDVTGTD------RTKTEIVINQIVAMFS 262 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPI 421 R P + +I G T IA PR+ + + G++ Sbjct: 263 R----YSQTPFEIEPIQIISEHNGQTRVTPNIA------PREFKAETAYINSCLGLNYSG 312 Query: 422 EDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK----- 473 E+ ++L+++ E V VP R DV + D++E+ YG D +K Sbjct: 313 EEIAKLLKKMALDATPSTSEDGILNVKVPITRSDVLHQCDIMEDAAIAYGYDNLKKTHPN 372 Query: 474 -----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF---- 524 + LP+ +V D L+ Q+ +EV+ + S +++ + Sbjct: 373 SESMVASALPVNKVADILRLATSQA------------GYLEVMPLTLCSHDENFAWLRAK 420 Query: 525 GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE- 582 G + +++ NP + + +RT+LLPGLLK N ++ +FE V ++D E Sbjct: 421 DDGTKAVKLENPKTIEYQVVRTTLLPGLLKTVKENRKHSLP-IKVFECGDIVLKDDKLER 479 Query: 583 ---GQKYMAAGIRKGSSGIE 599 Q+ AA +SG E Sbjct: 480 GAFNQRNWAAMYVGKASGFE 499 >gi|116333686|ref|YP_795213.1| EMAP domain-containing protein [Lactobacillus brevis ATCC 367] gi|116099033|gb|ABJ64182.1| EMAP domain [Lactobacillus brevis ATCC 367] Length = 212 Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 4/108 (3%) Query: 39 EALSPFTIVKVLSVERNPDLDCAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCI 97 E S F + V S +PD D ++ + E +Q+V G+PN++ + V A G+ + Sbjct: 92 ETASRFVVGYVKSTTPHPDSDHLLVTETVVDNDESLQIVSGSPNMQADIKVVVAKVGAMM 151 Query: 98 PENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVG 143 P N +I+ ++RG+ S GM+CS +EL L++ + LP D VG Sbjct: 152 P-NGLIIWPGELRGVSSNGMICSGRELGLANAPQKPGALILPDDYEVG 198 >gi|54020338|ref|YP_115619.1| phenylalanyl-tRNA synthetase subunit beta [Mycoplasma hyopneumoniae 232] gi|81378770|sp|Q601U6|SYFB_MYCH2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|53987511|gb|AAV27712.1| phenylalanyl-tRNA synthetase beta chain [Mycoplasma hyopneumoniae 232] Length = 718 Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust. Identities = 56/192 (29%), Positives = 86/192 (44%), Gaps = 19/192 (9%) Query: 1 MKFTLSWLKDHLDTD-VSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD 59 M F+L LK + + S +K+ D+L ++G EV+++ +S ++L + +NP+ D Sbjct: 1 MLFSLRRLKKLANLEAFSDQKVIDSLINLGFEVDQITKLNEISGIKFGQILEIRKNPEAD 60 Query: 60 ----CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIEST 115 C + D K +EIQ A NV + PGS N +K+RG S Sbjct: 61 NLWICKVQFAD--KIREIQ--TAAKNVIENKQVLAFIPGS--KSGNTTFLAKKLRGHISE 114 Query: 116 GMMCSEKELMLSD-------DSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDC 168 GM+ S EL + D ++ PI L LEL D I+D+ L NR D Sbjct: 115 GMLISAVELGFNKHLLNSELDQGVLVFDPIFDLESNPLK-VLELDDLILDIKLLWNRPDG 173 Query: 169 IGVRGIALDLVA 180 +A +L A Sbjct: 174 NSYLVLANELAA 185 Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust. Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 20/168 (11%) Query: 409 SEVKRLSGIDVPIEDSLR---ILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILR 465 +E+K + G+++ ED + ILE++G++ +D S P +R D+E AD + LR Sbjct: 396 NELKEILGLELSQEDISKTNLILEKIGYN----FDNTSFSPPFYRVDIEFFADYAADFLR 451 Query: 466 IYGVDQIKSEPLPLTQVEDK-RNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 YG++++K L QV+ K N L+ + L + E ++ ISKE+ F Sbjct: 452 FYGLEKLKD--CKLEQVKSKIPNPDLEPVK-------LKTLGYYETNSFLLISKEED--F 500 Query: 525 GGGQ-RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 + + ++L S + + +R SL L K T N R I + ++E Sbjct: 501 NPLELKSQDLLTFPSQEHTKIRYSLAWQLAKITKYNQKRKITEINLYE 548 >gi|116617819|ref|YP_818190.1| EMAP domain-containing protein [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116096666|gb|ABJ61817.1| EMAP domain [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 218 Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 S I V ++ +PD D I + + +Q+V G+PN++ G+ V A PG+ +P Sbjct: 93 SKLVIGFVENLSNHPDSDHLHITQTKVSDQKSLQIVSGSPNMKTGIKVVVAQPGTMMPSG 152 Query: 101 NMIVNVRKIRGIESTGMMCSEKELML 126 +I + +RG+ S+GM+ S +EL L Sbjct: 153 TLIWD-GALRGVPSSGMIVSGRELHL 177 >gi|216263480|ref|ZP_03435475.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia afzelii ACA-1] gi|215980324|gb|EEC21145.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia afzelii ACA-1] Length = 567 Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust. Identities = 63/298 (21%), Positives = 128/298 (42%), Gaps = 23/298 (7%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G + K V P +R D + D Sbjct: 287 YFQEEVEFNVKNVNRLLGSNLTLERICLSLKKMGVNSCSRDLKNYVIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R ++ ++ E++ SK Sbjct: 347 VIEDVMIGEGLASFHPE---LPKAFAVGRLSALEEFSRDIRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV + Sbjct: 404 KDFIDRMNISDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKI- 461 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 K + I +G+S L S K F+ ++ + +++++ Sbjct: 462 ------ALKNLNTTI-EGTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLNIE 507 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + ++Y GR I + +G FGE P +L+ FG+ P FEV ++ + Sbjct: 508 -INLKESQANFYINGRGADIFLK-DFNIGSFGEISPYVLNNFGIFIPCSVFEVNINKL 563 >gi|328957050|ref|YP_004374436.1| putative protein with RNA binding domain [Carnobacterium sp. 17-4] gi|328673374|gb|AEB29420.1| putative protein with RNA binding domain [Carnobacterium sp. 17-4] Length = 187 Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 4/106 (3%) Query: 44 FTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNM 102 F I +V +PD D +I + + + +Q+VCGA N+ G V A G+ +P N M Sbjct: 80 FVIGEVKECVAHPDSDHLSITQTEVDNGEMLQIVCGASNIAKGQKVVVAKVGAMMP-NGM 138 Query: 103 IVNVRKIRGIESTGMMCSEKELMLSD--DSASIMELPIDAPVGGRL 146 + ++RG S GM+CS +EL L+ + I+ LP A G + Sbjct: 139 AIWDGELRGEPSHGMICSARELNLTGIPEQKGILVLPDSAVTGEQF 184 >gi|294660320|ref|NP_853010.2| tRNA-binding domain-containing protein [Mycoplasma gallisepticum str. R(low)] gi|284811977|gb|AAP56578.2| tRNA-binding domain protein [Mycoplasma gallisepticum str. R(low)] gi|284930488|gb|ADC30427.1| tRNA-binding domain protein [Mycoplasma gallisepticum str. R(high)] Length = 211 Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats. Identities = 38/107 (35%), Positives = 53/107 (49%), Gaps = 8/107 (7%) Query: 42 SPFTIVKVLSVERNPDLDCAI--LRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPE 99 SPF I +V+ V NP L+ + +D K Q + +VCG NV G+ V I Sbjct: 92 SPFVIGQVIKV--NPILNTHLNHCLVDIAKEQPLSIVCGGSNVSEGIKVVVVKVDGFINT 149 Query: 100 NNMIVNVRKIRGIESTGMMCSEKELMLSD---DSASIMELPIDAPVG 143 I ++ +ES+GM+CSE EL L+D D I+ L D VG Sbjct: 150 GKHI-KCSELFNLESSGMICSENELGLTDLVNDDRKILVLDDDLVVG 195 >gi|255719111|ref|XP_002555836.1| KLTH0G18634p [Lachancea thermotolerans] gi|238937220|emb|CAR25399.1| KLTH0G18634p [Lachancea thermotolerans] Length = 593 Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust. Identities = 66/311 (21%), Positives = 121/311 (38%), Gaps = 64/311 (20%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 VVI S+ I S+ +I +H+ NT ++ +E D + Sbjct: 211 VVIDSENTICSLPPLINSEHSKISMNTKNIFIEATATDKTKVEV---------------- 254 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTAS----DICIARNIT------YKPRKIVFMNSEV 411 V+ IV++ C + +I N + P+ + + Sbjct: 255 ----------VINQIVAMFSRYCAEEFTVEPVEIVSEHNHQSRTTPDFSPKSMNVSTQYI 304 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGE---YDKFEVSVPSWRQDVEEKADLVEEILRIYG 468 G+++ L+++ S+ G+ D +V +P R D+ D++E+ YG Sbjct: 305 NSCLGLELSAGQICDYLKKM--SLYGQPEGKDVIKVDIPITRSDILHPCDIMEDAAIGYG 362 Query: 469 VDQIK-----------SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFI 516 +++ + LP+ +V D R S Q S + L S N+ F+ Sbjct: 363 YNKLPKGKKLSNANFVAAALPINKVSDIFRQASAQASWLEVLPLTLCSHDE----NYKFL 418 Query: 517 SKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-V 575 E G + +++ NP +++ +RTSLLPG+LK N ++ +FE V Sbjct: 419 RVEDD-----GTQAVKLANPKTSEYQVVRTSLLPGILKTVRENRKHSLP-IKVFEAGDVV 472 Query: 576 YENDTPEGQKY 586 Y+ND E + Y Sbjct: 473 YKNDKLERKAY 483 >gi|172945|gb|AAA35151.1| Phe-RNA synthetase [Saccharomyces cerevisiae] Length = 383 Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust. Identities = 88/407 (21%), Positives = 167/407 (41%), Gaps = 77/407 (18%) Query: 306 SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVD 365 S R+ S+ +I +H+ NT ++L+++ D ++ L I+T F R D Sbjct: 3 SKDRVCSLPPLINSEHSKISVNTRNILIDITATDK---TKAEIVLNILTT---MFSRYCD 56 Query: 366 LQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS---GIDVPIE 422 + ++ I+S G + +A N + M+ +K ++ G+D + Sbjct: 57 EPFTVEPVE-----IVSEHNGQSR---LAPNFNDR-----IMDVSIKYINSCLGLDQSAD 103 Query: 423 DSLRILERLGFSVIG---EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------ 473 + L+++ + + D V +P R D+ D++E+ YG + + Sbjct: 104 EIAHCLKKMSLHAVQSKEDKDILHVDIPVTRPDILHACDIMEDAAVGYGFNNLPKGEKLS 163 Query: 474 -----SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAM-MEVVNWSFISKEQSVLF--- 524 ++PLP+ +V D + RV +S+A +EV+ + S +++ F Sbjct: 164 NANFIAKPLPINKVSD-------------IFRVASSQATWVEVLPLTLCSHDENFKFLRQ 210 Query: 525 -GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE 582 +++ NP + + +RT+LLPG+LK N ++ +FE V+++D E Sbjct: 211 SDNDDLAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDVVFKDDKLE 269 Query: 583 ----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLD 636 +++ AA +SG E G L R ++ + A A IE Sbjct: 270 RKAYNERHWAAIYVGKNSGFEIIQGLLGKIMQTFRTEWIADYGAAASGRGYWIE------ 323 Query: 637 SLRFESGAPSWYHPGRSGII----KTSAE-IVLGYFGEFHPNILDFF 678 E + Y PGR + K AE +G+ G HP ++ F Sbjct: 324 ----EDDSVKTYFPGRGAKVMFRSKEGAEPKQIGHLGVLHPEVMMNF 366 >gi|330718756|ref|ZP_08313356.1| EMAP domain-containing protein [Leuconostoc fallax KCTC 3537] Length = 211 Score = 47.0 bits (110), Expect = 0.012, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 11/116 (9%) Query: 27 SIGLEVEKVDNREALSPFTIV--KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVR 83 S+GLE E +SP +V V S++ +PD D I + + + +Q+V G+PN+ Sbjct: 81 SVGLETELT-----VSPSKLVVGYVESMQAHPDSDHLHITQTRVTEDKTLQIVSGSPNMA 135 Query: 84 VGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELML--SDDSASIMELP 137 + V A PG+ +P +I + +RGI+S GM+ S +EL L + D + LP Sbjct: 136 ENIKVVVAQPGTMMPSGEIIWD-GALRGIDSAGMIVSGRELRLPGAPDKPGALILP 190 >gi|227432304|ref|ZP_03914297.1| phenylalanine--tRNA ligase beta subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227351910|gb|EEJ42143.1| phenylalanine--tRNA ligase beta subunit [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 218 Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 2/86 (2%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 S I V ++ +PD D I + + +Q+V G+PN++ G+ V A PG+ +P Sbjct: 93 SKLVIGFVENLSNHPDSDHLHITQTKVSDQKSLQIVSGSPNMKTGIKVVVAQPGTMMPSG 152 Query: 101 NMIVNVRKIRGIESTGMMCSEKELML 126 +I + +RG+ S+GM+ S +EL L Sbjct: 153 ALIWD-GALRGVPSSGMIVSGRELHL 177 >gi|301121442|ref|XP_002908448.1| actin-related protein 2/3 complex subunit, putative [Phytophthora infestans T30-4] gi|262103479|gb|EEY61531.1| actin-related protein 2/3 complex subunit, putative [Phytophthora infestans T30-4] Length = 537 Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 8/80 (10%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCI----PENN----MIVNVRKIRGIESTGMMCSEKEL 124 +Q++CGAPNVR G A G+ + PE + + K+RG S GM+CSE EL Sbjct: 420 LQIICGAPNVRQGARVPVAKVGTRLAIKEPETGELKKLKIKKSKLRGEVSQGMICSEAEL 479 Query: 125 MLSDDSASIMELPIDAPVGG 144 L+D+S I+ DA VGG Sbjct: 480 GLTDESDGILIFEDDAEVGG 499 >gi|225552475|ref|ZP_03773415.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia sp. SV1] gi|225371473|gb|EEH00903.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia sp. SV1] Length = 566 Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNHIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E LP K LS + +R V+ ++ E++ S+ Sbjct: 347 VIEDVMIGEGLSSFNPE-LPKAFAVGK--LSPLEEFSRNVRNLMVGMGFQEMIYNYMGSR 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADILIEG-FNIGSFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|226320995|ref|ZP_03796540.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 29805] gi|226233596|gb|EEH32332.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 29805] Length = 566 Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G S + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVSSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|328479712|gb|EGF48862.1| phenylalanyl-tRNA synthetase subunit beta [Lactobacillus rhamnosus MTCC 5462] Length = 120 Score = 47.0 bits (110), Expect = 0.015, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 +VEE+ RIYG D + S LP T + + Q R R + +L + + + + ++ Sbjct: 1 MVEEVARIYGFDNLPST-LPTTTMTIGE-YTPAQKRIRRTRHLLEGLGLNQAITYGLTTE 58 Query: 519 EQSVLFGGGQRE-LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYE 577 + + F E ++ +P++ D + +R +++ GLL N R D AI+E + Sbjct: 59 QAATRFKLQPGEPTQVDSPMTKDHAVLRMNMVTGLLDVIKYNQARKETDVAIYEQGRILP 118 Query: 578 N 578 N Sbjct: 119 N 119 >gi|254570487|ref|XP_002492353.1| Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac [Pichia pastoris GS115] gi|238032151|emb|CAY70095.1| Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac [Pichia pastoris GS115] gi|328353637|emb|CCA40035.1| phenylalanyl-tRNA synthetase beta chain [Pichia pastoris CBS 7435] Length = 589 Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust. Identities = 64/306 (20%), Positives = 123/306 (40%), Gaps = 51/306 (16%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEK 456 KPR + S + G+++ ++ +++L+++G + D +V +P R DV + Sbjct: 291 KPRLMQAEISYINSCLGLNLDVDTIIQLLKKMGLQPKQNESKNDLLDVYIPITRPDVLHQ 350 Query: 457 ADLVEEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA 506 D++E+ YG + + ++PLP+ ++ D L+ Q+ Sbjct: 351 CDIMEDASIAYGYNNLVKTQAQSQALVAQPLPINKIADIVRLATSQN------------G 398 Query: 507 MMEVVNWSFISKEQSVLF---GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRA 563 E + + S +++ F + +++ NP + + +RT+LLPGLLK N + Sbjct: 399 WSETLPLTLCSHDENFKFLRQNDDSKAVKLANPKTIEYQVVRTTLLPGLLKTVKENRKHS 458 Query: 564 IADFAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEG-SGRLWSDKSEERCRFVD 617 + +FE + D + Q+ AA ++G E G L R +++ Sbjct: 459 LP-IKVFECGDIVLKDETLERRAKNQRNWAAVFVGKTAGFEFVQGLLGKIMQTLRTDWLE 517 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII----KTSAEI-VLGYFGEFHP 672 A + + A + + PGR I AE +G G HP Sbjct: 518 KPSAGKRGYWIE-----------QDDANATFFPGRGAKIFFRAADGAEANEIGSIGVLHP 566 Query: 673 NILDFF 678 +L FF Sbjct: 567 EVLGFF 572 >gi|321253860|ref|XP_003192877.1| phenylalanyl-tRNA synthetase beta chain [Cryptococcus gattii WM276] gi|317459346|gb|ADV21090.1| phenylalanyl-tRNA synthetase beta chain, putative [Cryptococcus gattii WM276] Length = 632 Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust. Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 13/194 (6%) Query: 400 KPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEK 456 +PR +S + G+ + ++ +L R+ S D +V VP R D+ + Sbjct: 299 EPRATTASSSYINAAIGLSLSRQEICTLLTRMSLSATPSPSSEDLLDVLVPCTRPDILHE 358 Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRT-RYVKRVLASRAMMEVVNWSF 515 D++E+ YG + + E +P T K + +R ++ A +E + Sbjct: 359 CDIMEDAAIAYGFNNLPRE-MPTTNTVAK---AFPVNRLGDIIREECAMAGWVEALPLIL 414 Query: 516 ISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFE 571 S +++ + G +++ NP S + +RTSLLPG+LK T R IFE Sbjct: 415 CSHDENFAWLNRPDPGHYAVQLANPKSLEYQVIRTSLLPGMLK-TARENKALPLPMKIFE 473 Query: 572 VSHVYENDTPEGQK 585 VS V D E ++ Sbjct: 474 VSDVAVQDPTEERQ 487 >gi|26554390|ref|NP_758324.1| hypothetical protein MYPE9410 [Mycoplasma penetrans HF-2] gi|26454400|dbj|BAC44728.1| conserved hypothetical protein [Mycoplasma penetrans HF-2] Length = 196 Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 3/101 (2%) Query: 44 FTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMI 103 F + +++ +E P+ +D K + ++VVCGA N + L V A + +P+ I Sbjct: 88 FVVGEIVKLEPIPNTHLNYCDVDV-KDKVLKVVCGAANAKQNLKVVVAMINTFMPDGKPI 146 Query: 104 VNVRKIRGIESTGMMCSEKEL-MLSDDSASIMELPIDAPVG 143 + I+G ES GM+CS KEL M D+ I+EL VG Sbjct: 147 IK-NSIQGKESFGMLCSAKELNMPHDNKKGIIELNNSYQVG 186 >gi|111115342|ref|YP_709960.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia afzelii PKo] gi|122956348|sp|Q0SMZ4|SYFB_BORAP RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|110890616|gb|ABH01784.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia afzelii PKo] Length = 567 Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust. Identities = 59/298 (19%), Positives = 129/298 (43%), Gaps = 23/298 (7%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G + K V P +R D + D Sbjct: 287 YFQEEVEFNVKNVNRLLGSNLTLERICLSLKKMGVNSYSRDLKNYVIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R ++ ++ E++ SK Sbjct: 347 VIEDVMIGEGLASFHPE---LPKAFAVGRLSALEEFSRDIRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV + Sbjct: 404 KDFIDRMNISDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKI- 461 Query: 577 ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD 636 ++ ++ IEG+ + + + F+ ++ + +++++ Sbjct: 462 -------------ALKNLNTTIEGTNTFTNLAFLMSGKEIS-FNEINSIVATLFYYLNIE 507 Query: 637 SLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + ++Y GR I + +G FGE P +L+ FG+ P FEV ++ + Sbjct: 508 -INLKESQANFYINGRGADIFLK-DFNIGSFGEISPYVLNNFGIFIPCSVFEVNINKL 563 >gi|194466660|ref|ZP_03072647.1| t-RNA-binding domain protein [Lactobacillus reuteri 100-23] gi|194453696|gb|EDX42593.1| t-RNA-binding domain protein [Lactobacillus reuteri 100-23] Length = 215 Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 12/88 (13%) Query: 71 QEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD-- 128 + +Q+VCG+PNV G+ V A PG+ +P+ I+ ++ G++S GM+C +EL + + Sbjct: 126 KTVQIVCGSPNVAEGIKVVVARPGAMMPDGK-IIWPGQLMGVDSDGMLCGFRELRIKNAP 184 Query: 129 DSASIMELPIDAPVGGRLSDYLELSDPI 156 D + +P D+ E+ +P+ Sbjct: 185 DEKGLFIIP---------DDWQEVGEPV 203 >gi|184153840|ref|YP_001842181.1| hypothetical protein LAR_1185 [Lactobacillus reuteri JCM 1112] gi|183225184|dbj|BAG25701.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112] Length = 216 Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCG+PNV G+ V A PG+ +P+ I+ ++ G++S GM+C +EL + + D Sbjct: 129 VQIVCGSPNVAEGIKVVVARPGAMMPDGK-IIWPGQLMGVDSDGMLCGFRELRIKNAPDE 187 Query: 131 ASIMELPIDAPVGGRLSDYLELSDPI 156 + +P D+ E+ +P+ Sbjct: 188 KGLFIIP---------DDWQEVGEPV 204 >gi|242019744|ref|XP_002430319.1| phenylalanyl-tRNA synthetase beta chain, putative [Pediculus humanus corporis] gi|212515434|gb|EEB17581.1| phenylalanyl-tRNA synthetase beta chain, putative [Pediculus humanus corporis] Length = 569 Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust. Identities = 69/322 (21%), Positives = 127/322 (39%), Gaps = 56/322 (17%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V++ S+G + S+ II G H+ T ++ +E Sbjct: 221 VILDSNGVVLSLPPIINGDHSKITLKTKNIFIEAT------------------------- 255 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKP-RKIVFMNSEVKRL------ 414 DL+ V+ IVS+ S +A I Y +K + EVK++ Sbjct: 256 -ATDLKKAEVVIDTIVSMFSQYSSNQFSYERVA--IEYPDGKKDIQPKMEVKKMNVNLNK 312 Query: 415 ----SGIDVPIEDSLRILERLGFSVIGEYDK----FEVSVPSWRQDVEEKADLVEEILRI 466 +GI + +++L ++G + K VSVP R D+ + D++E++ Sbjct: 313 ANLITGIQESQDTLIKLLLKMGLTTATNKKKNSPKMLVSVPPTRHDILHEIDIIEDVAIA 372 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQ-SVLFG 525 +G ++IK V + +L+ T +++ ++ E + +S S + S G Sbjct: 373 FGYNKIKKTFPKTATVAQEYSLN---KLTDHLREEISRSGFTEALTFSLCSTDDISTKLG 429 Query: 526 GGQREL---EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY-----E 577 ++ + NP + + RT LLP +LK N + IFEVS V E Sbjct: 430 KKINDIPAVHVSNPKALEFQVCRTELLPCILKTIASNKQLPLP-IKIFEVSDVVMASKNE 488 Query: 578 NDTPEGQKYMAAGIRKGSSGIE 599 + ++++ A +SG E Sbjct: 489 EVGAKNERHLCAVYCNKTSGFE 510 >gi|227543922|ref|ZP_03973971.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri CF48-3A] gi|300909670|ref|ZP_07127131.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri SD2112] gi|227186099|gb|EEI66170.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri CF48-3A] gi|300893535|gb|EFK86894.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri SD2112] Length = 215 Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCG+PNV G+ V A PG+ +P+ I+ ++ G++S GM+C +EL + + D Sbjct: 128 VQIVCGSPNVAEGIKVVVARPGAMMPDGK-IIWPGQLMGVDSDGMLCGFRELRIKNAPDE 186 Query: 131 ASIMELPIDAPVGGRLSDYLELSDPI 156 + +P D+ E+ +P+ Sbjct: 187 KGLFIIP---------DDWQEVGEPV 203 >gi|216264272|ref|ZP_03436264.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 156a] gi|215980745|gb|EEC21552.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 156a] Length = 566 Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNHIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E LP + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE-LPRAFAVGR--LSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLSFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|148544475|ref|YP_001271845.1| tRNA-binding domain-containing protein [Lactobacillus reuteri DSM 20016] gi|227363097|ref|ZP_03847232.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri MM2-3] gi|325682797|ref|ZP_08162313.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri MM4-1A] gi|148531509|gb|ABQ83508.1| t-RNA-binding domain protein [Lactobacillus reuteri DSM 20016] gi|227071815|gb|EEI10103.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri MM2-3] gi|324977147|gb|EGC14098.1| phenylalanine--tRNA ligase beta subunit [Lactobacillus reuteri MM4-1A] Length = 215 Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 12/86 (13%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCG+PNV G+ V A PG+ +P+ I+ ++ G++S GM+C +EL + + D Sbjct: 128 VQIVCGSPNVAEGIKVVVARPGAMMPDGK-IIWPGQLMGVDSDGMLCGFRELRIKNAPDE 186 Query: 131 ASIMELPIDAPVGGRLSDYLELSDPI 156 + +P D+ E+ +P+ Sbjct: 187 KGLFIIP---------DDWQEVGEPV 203 >gi|332638564|ref|ZP_08417427.1| EMAP domain-containing protein [Weissella cibaria KACC 11862] Length = 212 Score = 46.2 bits (108), Expect = 0.025, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 4/116 (3%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 T + K+ L G E E V + F + V E +PD D I + Sbjct: 67 TSDDVAKLNAVLVEAGFEAELVADETP--KFVVGYVEKAEPHPDSDHLQITTTVVDNDER 124 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V G+PN+R G+ V A G+ +P + +I+ +RG+ S GM+ S +EL L + Sbjct: 125 VQIVSGSPNMRQGIKVVVAKVGAMMP-SGLIIWPGALRGVASNGMITSGRELRLPN 179 >gi|291059434|gb|ADD72169.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema pallidum subsp. pallidum str. Chicago] Length = 620 Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 29/296 (9%) Query: 394 ARNIT---YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 R++T Y K + ++ RL G+ +P+ D R+ +V + + V ++R Sbjct: 335 GRSVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYR 394 Query: 451 QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 D DL+EE++ +D+ + P T V +L+L TR +K +L E Sbjct: 395 NDFLHAVDLIEEVMLGRTLDRFSPQVPCSFT-VGRLSDLTLL---TRKIKHLLVGFGYQE 450 Query: 510 VVNWSFISKEQ--SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 ++ S + + + +EI NP++ +R S++P LL A ++ A+ Sbjct: 451 MIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLLSAELKSA-HALYPH 509 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 IFE+ V +P G+ G+ + G L + + L L Sbjct: 510 RIFEIGKV-AFCSPHGE--------HGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLK 560 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + P+ + E + GR I V G FGE HP +L + + P Sbjct: 561 L--PY------QVEEAQDPRFVLGRQASICVHGSRV-GIFGEIHPQVLSNWDIRMP 607 >gi|156844045|ref|XP_001645087.1| hypothetical protein Kpol_1035p42 [Vanderwaltozyma polyspora DSM 70294] gi|156115743|gb|EDO17229.1| hypothetical protein Kpol_1035p42 [Vanderwaltozyma polyspora DSM 70294] Length = 595 Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust. Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 22/167 (13%) Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK------- 473 I L+ + G + D V++P R DV D++E+ YG + + Sbjct: 317 IAGCLKKMSLHGVASTENKDVMHVNIPITRPDVLHPCDIMEDAAVGYGYNNLPKGEKLSN 376 Query: 474 ----SEPLPLTQVED-KRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQ 528 S PLP+ +V D R S Q S + L S N+ F+ E G+ Sbjct: 377 ANFISSPLPINKVSDIFRTASAQASWLEVLPLTLCSHDE----NFKFLRLEDD-----GK 427 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV 575 + +++ NP + + +RTSLLPG+LK N ++ +FE V Sbjct: 428 KVVKLANPKTLEYQVVRTSLLPGILKTVKENRKHSLP-IKVFETGDV 473 >gi|15639009|ref|NP_218455.1| phenylalanyl-tRNA synthetase subunit beta [Treponema pallidum subsp. pallidum str. Nichols] gi|189025249|ref|YP_001933021.1| phenylalanyl-tRNA synthetase subunit beta [Treponema pallidum subsp. pallidum SS14] gi|6094400|sp|O83059|SYFB_TREPA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|238689310|sp|B2S1W3|SYFB_TREPS RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|3322265|gb|AAC65007.1| phenylalanyl-tRNA synthetase beta subunit (pheT) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017824|gb|ACD70442.1| phenylalanyl-tRNA synthetase subunit beta [Treponema pallidum subsp. pallidum SS14] Length = 604 Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust. Identities = 66/296 (22%), Positives = 118/296 (39%), Gaps = 29/296 (9%) Query: 394 ARNIT---YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWR 450 R++T Y K + ++ RL G+ +P+ D R+ +V + + V ++R Sbjct: 319 GRSVTTPFYFQEKREVAHEQIDRLLGMPLPVADITEAFARMDCAVQVKQGTYVVEPAAYR 378 Query: 451 QDVEEKADLVEEILRIYGVDQIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 D DL+EE++ +D+ + P T V +L+L TR +K +L E Sbjct: 379 NDFLHAVDLIEEVMLGRTLDRFSPQVPCSFT-VGRLSDLTLL---TRKIKHLLVGFGYQE 434 Query: 510 VVNWSFISKEQ--SVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADF 567 ++ S + + + +EI NP++ +R S++P LL A ++ A+ Sbjct: 435 MIFHYLGSAREFCTRMRCTADDLIEIENPLTESYRFVRRSIIPCLLSAELKSA-HALYPH 493 Query: 568 AIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALS 627 IFE+ V +P G+ G+ + G L + + L L Sbjct: 494 RIFEIGKV-AFCSPHGE--------HGTCTQQSLGFLNASQEASYNEVASLVSGLLYCLK 544 Query: 628 VIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + P+ + E + GR I V G FGE HP +L + + P Sbjct: 545 L--PY------QVEEAQDPRFVLGRQASICVHGSRV-GIFGEIHPQVLSNWDIRMP 591 >gi|15594859|ref|NP_212648.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia burgdorferi B31] gi|6686020|sp|P94283|SYFB_BORBU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|1785608|gb|AAB41019.1| phenylalanyl-tRNA synthetase beta subunit [Borrelia burgdorferi] gi|2688420|gb|AAC66870.1| phenylalanyl-tRNA synthetase, beta subunit (pheT) [Borrelia burgdorferi B31] Length = 566 Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|126136475|ref|XP_001384761.1| henylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Scheffersomyces stipitis CBS 6054] gi|126091983|gb|ABN66732.1| henylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS) [Scheffersomyces stipitis CBS 6054] Length = 590 Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust. Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 27/147 (18%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIK----------SEPLPLTQVEDKRNLSLQQ 492 +V +P R DV + D++E++ YG +++ + PLP+ ++ D L+ Q Sbjct: 336 DVEIPITRPDVLHQCDIMEDVAVAYGFNKLTKTKPQSESLVASPLPVNKISDILRLASSQ 395 Query: 493 SRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSL 548 S +EV+ + S +++ F R +++ NP + + +RT+L Sbjct: 396 S------------GYLEVLPLTLCSHDENFKFLRTVDDNTRAVKLENPKTVEYQVVRTTL 443 Query: 549 LPGLLKATGRNVDRAIADFAIFEVSHV 575 LPG+LK N ++ +FE + Sbjct: 444 LPGILKTIKENRKHSLP-IRVFEAGDI 469 >gi|325119340|emb|CBZ54893.1| hypothetical protein NCLIV_053190 [Neospora caninum Liverpool] Length = 674 Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust. Identities = 136/630 (21%), Positives = 236/630 (37%), Gaps = 102/630 (16%) Query: 153 SDPIIDVSLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESI-PLEIKFDLDDS 211 ++ I + + NR D + GI+ L A N PL + + P +F + Sbjct: 47 TETIYKIEVPANRYDLLCTEGISRALYAFN-------NPDAPLPAYRLEPATPQFTMTVR 99 Query: 212 SLCKGFAMCCVKGVRNNVAPN--------WMRQRLKAVGLRSISALVDITNYVSLDRGYP 263 + K V + NV N + +L R S LV I + L + P Sbjct: 100 TAVKQVRPFVVCAILRNVTLNKESLASFIEFQDKLHHTLCRRRS-LVAIGTH-DLSKVQP 157 Query: 264 SHVFDASRISDVLTVRRAC----SGEKILALDNQEYDLSPDNVVIAS--------DG--R 309 +DA D+ V C +GE+++A + L +I + DG R Sbjct: 158 PFFYDARPPKDLEFVPLGCDSQMNGEQVMAHFSNHLQLKAYLPLIQNSHVYPLILDGKDR 217 Query: 310 IQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGM 369 I S+ II + + ++T D+ +E D I A+ N + S Y E ++ + Sbjct: 218 ILSLPPIINSEFSKVTEDTRDIFIECTAVD-ITKAQIVLNTLVAMFSEYCKE-PFTVEPI 275 Query: 370 IPVLKHIVSLILSLCGGTASDICIARN----------ITYKPRKIVFMNSEVKRLSGIDV 419 V + S + +S+ ARN + R + F V++L+GI V Sbjct: 276 QVVYEDPTSAPIDRSAKCSSEE-PARNGEASMNGWAFPRVESRSMKFSLDYVRQLTGIPV 334 Query: 420 -PIEDSLRILERLGFSVIG----EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKS 474 E +L+R+ G D E S+P R D+ + D+VE++ Y +++ Sbjct: 335 LTAETCTNLLKRMMIHASGGRETTADILEASIPITRSDILHERDIVEDVAIAYSFNKLPI 394 Query: 475 EPLPLTQ-------VEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGG 527 P + E RN T + L+S A N E S+LF Sbjct: 395 TPSYMLTGDALNCLSEKIRNFCTVCGYTEALNFSLSS-AAENAANLGRAPGEGSLLFNPL 453 Query: 528 QRE-----LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH--VYENDT 580 + + + + N + + +RT+L+ GLLK N R +FE+ V ++ T Sbjct: 454 EYQVAPHPVRLANSKTREFDQVRTTLISGLLKTVVANKGRRELPIKLFEIGDVCVLDSST 513 Query: 581 PEGQKYM----AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLF----------------- 619 G + + A + SSG+E + D + +FV + Sbjct: 514 EVGARNLRYCCVAFADEHSSGLEEVHGVL-DALLQSLQFVGEYAIAEMEAAVAAAAVAEK 572 Query: 620 ----DAKADALSVIEPFVS--LDSLRFESGAPSWYHPGRSGIIKTSAE---------IVL 664 A A A ++ +S + + + + PGR I S + ++L Sbjct: 573 AGGEQAGAHAAEQLQRVLSRIRGTFKLVASQEKTFLPGRQVHIVASRKSSDAVENVPVLL 632 Query: 665 GYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G G HP+ L FGL+ P+ E+ +++ Sbjct: 633 GVMGTLHPHTLKAFGLTIPVSILELNVEAF 662 >gi|226321823|ref|ZP_03797349.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi Bol26] gi|226233012|gb|EEH31765.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi Bol26] Length = 566 Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|326437432|gb|EGD83002.1| phenylalanyl-tRNA synthetase subunit beta [Salpingoeca sp. ATCC 50818] Length = 601 Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust. Identities = 84/408 (20%), Positives = 156/408 (38%), Gaps = 62/408 (15%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 V+ ++G + S+ II G H+ +T DV +E D + R+ L ++ Sbjct: 230 VIRDANGVVLSLPPIINGNHSRITLDTKDVFIECTATD---LTRAKIVLNMMV------- 279 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI----VFMNSEVKRLSGI 417 M+P K I + ++ G S + Y+ K+ ++ +K+ Sbjct: 280 ------TMLPA-KSIEPVHVTPPNGQESHVY--PEFKYRTEKVSAGDIYRRMGIKKEQAT 330 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-SEP 476 + L ++ G V + D EV +P R D+ D+ E+ +G D I+ ++P Sbjct: 331 PEQLAALLTKMQLRGKLV--DADAIEVEIPPTRPDILHACDIWEDAAVAFGFDNIQATQP 388 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF----GGGQRELE 532 +T + + L + +++ + A E + ++ +++ + G+ Sbjct: 389 QVVTAGKQQPINKL----SDHLRLITAQAGYAEALTFALCTRDDNFKNLRRPDDGKTACV 444 Query: 533 ILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIR 592 I NP + D RT+LL GLL+ N + +FE+S V D Sbjct: 445 IANPKTKDFQVARTNLLAGLLRTLHNNSAMPLP-IQLFEISDVVLLDP------------ 491 Query: 593 KGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW----- 647 SG RL + + RF L + ++E + D G+ ++ Sbjct: 492 SSDSGASNERRLAAVAMGKSPRFEALQGLLDYIMKMLE--IPFDPSAVNPGSKAYCLLPT 549 Query: 648 YHP------GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEV 689 P G + I+ A + G G HP +L F L P+ FE+ Sbjct: 550 QDPAFLGELGAADIVYNGARV--GVLGVVHPEVLQNFDLRYPVSAFEL 595 >gi|27497131|gb|AAO17326.1| phenylalanyl-tRNA synthetase beta chain [Neisseria elongata] Length = 57 Score = 45.8 bits (107), Expect = 0.031, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNP 56 M+F+ SWLK DT++S +K+ LT GLEVE+ + A + I +V SVE++P Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPAFTGVVIAEVKSVEKHP 57 >gi|221218074|ref|ZP_03589540.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 72a] gi|221192022|gb|EEE18243.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 72a] gi|312148066|gb|ADQ30725.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi JD1] Length = 566 Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E LP + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE-LPRAFAVGR--LSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|218249842|ref|YP_002375023.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi ZS7] gi|226737029|sp|B7J278|SYFB_BORBZ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|218165030|gb|ACK75091.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi ZS7] Length = 566 Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust. Identities = 65/300 (21%), Positives = 127/300 (42%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVY 576 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 577 --ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 DT E G+S L S K F+ ++ + +++ Sbjct: 463 LRNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|88602992|ref|YP_503170.1| phenylalanyl-tRNA synthetase subunit beta [Methanospirillum hungatei JF-1] gi|121730851|sp|Q2FLL1|SYFB_METHJ RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|88188454|gb|ABD41451.1| phenylalanyl-tRNA synthetase beta subunit [Methanospirillum hungatei JF-1] Length = 545 Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 36/262 (13%) Query: 444 VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLA 503 + +P +R D+ + D+ E++ G +++E LP T + + + ++ + + Sbjct: 312 IRIPCYRADIMHEWDVYEDVAIGAGFGNLEAE-LPATFATGCEHPIIALASA--IRDICS 368 Query: 504 SRAMMEVVNWSFISKEQSVLFGGGQRE-----LEILNPISADMSNMRTSLLPGLLKATGR 558 +EV+ ++ + V++ QRE L +L+PIS + + +RT LLP LL Sbjct: 369 GLGYLEVMPFTL--SNEDVMYTRMQREPDPKALHVLHPISEEQTLVRTDLLPLLLDLLRM 426 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDL 618 N R + IF V + Q Y + G +D SE Sbjct: 427 NKRRELPQ-RIFHTGDVVSS----MQTYQKLALASTHPG--------ADFSEAY------ 467 Query: 619 FDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFF 678 A DAL + + L ES P++ PGR+ I + +G FGE HP +L+ F Sbjct: 468 --ATTDALMR---ELGISYLPAESADPAFI-PGRAVDIMVDGK-KMGVFGEIHPGVLNKF 520 Query: 679 GLSNPICGFEVYLDSIPISQKK 700 + P+ G E+ L + QK+ Sbjct: 521 DIDQPVIGIEIDLHLLFPGQKE 542 >gi|225549606|ref|ZP_03770572.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 118a] gi|225369883|gb|EEG99330.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 118a] Length = 566 Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|289673305|ref|ZP_06494195.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 44 Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust. Identities = 22/39 (56%), Positives = 26/39 (66%) Query: 133 IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGV 171 +MEL DAPVG + YL L D I+V LTPNR DC+ V Sbjct: 5 LMELAADAPVGQDIRVYLSLDDASIEVDLTPNRGDCLSV 43 >gi|312149569|gb|ADQ29640.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi N40] Length = 566 Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|224532903|ref|ZP_03673515.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi WI91-23] gi|224512179|gb|EEF82568.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi WI91-23] Length = 566 Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|224533543|ref|ZP_03674132.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi CA-11.2a] gi|224513216|gb|EEF83578.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi CA-11.2a] Length = 566 Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E LP + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE-LPRAFAVGR--LSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|50287233|ref|XP_446046.1| hypothetical protein [Candida glabrata CBS 138] gi|49525353|emb|CAG58970.1| unnamed protein product [Candida glabrata] Length = 595 Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust. Identities = 53/226 (23%), Positives = 104/226 (46%), Gaps = 49/226 (21%) Query: 404 IVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDK-----FEVSVPSWRQDVEEKAD 458 I ++NS + G+ E+ ++ ++++ S+ GE K V++P R DV D Sbjct: 301 IPYINSAL----GLQQTPEEIIQCIKKM--SLHGEASKTDEAVLHVTIPITRPDVLHPCD 354 Query: 459 LVEEILRIYGVDQIK-----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA- 506 ++E+ YG + + + PLP+ ++ D + RV +S+A Sbjct: 355 IMEDAAIGYGYNNLPKGEKLSNANFIASPLPINKISD-------------IFRVASSQAS 401 Query: 507 MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDR 562 +EV+ + S +++ F G++ +++ NP + + +RT+LLPG+LK N Sbjct: 402 WLEVLPLTLCSHDENFKFLRLEDDGKQVVKLENPKTLEYQVVRTTLLPGILKTVKENRKH 461 Query: 563 AIADFAIFEVSH-VYENDTPEGQKY-------MAAGIRKGSSGIEG 600 ++ +FE V++N+ E + Y + AG G I+G Sbjct: 462 SLP-IKVFETGDVVFKNEALERKSYNERHWGAIYAGKNSGFEIIQG 506 >gi|270290452|ref|ZP_06196677.1| EMAP domain-containing protein [Pediococcus acidilactici 7_4] gi|304384666|ref|ZP_07367012.1| tRNA binding domain protein [Pediococcus acidilactici DSM 20284] gi|270281233|gb|EFA27066.1| EMAP domain-containing protein [Pediococcus acidilactici 7_4] gi|304328860|gb|EFL96080.1| tRNA binding domain protein [Pediococcus acidilactici DSM 20284] Length = 211 Score = 45.4 bits (106), Expect = 0.040, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 6/117 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T + K+ + L G E V + SP F + V +V+ +PD D I + + Sbjct: 69 TAAQVTKLNEQLRQAGFADELVADE---SPKFVVGYVKTVKPHPDSDHLQITETEVDNGE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD 128 +Q+V G+PN++ + V A G+ +P+ MI+ ++RG+ S GM+ S +EL L + Sbjct: 126 TLQIVSGSPNMKADIKVVVAKVGAMMPD-GMIIWPGELRGVSSDGMIASGRELHLKN 181 >gi|224534729|ref|ZP_03675301.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia spielmanii A14S] gi|224513977|gb|EEF84299.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia spielmanii A14S] Length = 566 Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust. Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F V RL G ++ +E L+++G + K + P +R D + D Sbjct: 287 YFQEEVEFNVKNVNRLLGNNLTLERICLSLKKMGINSYSRDLKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+I+ G+ E L + LS + +R ++ ++ E++ SK Sbjct: 347 VIEDIMIGEGLASFYPE---LPKAFSVGRLSAMEELSRDIRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFEV V Sbjct: 404 KDFIDRMNIDDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEVGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L + K F+ ++ + +++ Sbjct: 463 LKNLDTIE-----------GTSTFTNLAFLMAGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES A ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLRESQA-AFYINGRGADILLEG-FNIGNFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|223888986|ref|ZP_03623577.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 64b] gi|223885802|gb|EEF56901.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 64b] Length = 566 Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIVPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLSFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|225548673|ref|ZP_03769720.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 94a] gi|225370703|gb|EEH00139.1| phenylalanyl-tRNA synthetase, beta subunit [Borrelia burgdorferi 94a] Length = 566 Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust. Identities = 67/300 (22%), Positives = 130/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E LP + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE-LPRAFAVGR--LSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNINDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|299471764|emb|CBN76985.1| conserved unknown protein [Ectocarpus siliculosus] Length = 638 Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust. Identities = 65/284 (22%), Positives = 117/284 (41%), Gaps = 46/284 (16%) Query: 443 EVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRY---VK 499 +V+VP R D+ D+VE++ YG ++I + LP T + Q + ++ Sbjct: 368 KVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTT-LPATL-----TVGGHQPLNNFGDLLR 421 Query: 500 RVLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNMRTSLLPGLLKATG 557 ++ E++ S+ ++ Q E + + NP + +RTSLLPG LK Sbjct: 422 EEISRAGYTEMLTHGLCSRAENFKMLRRQEEPCVSLSNPKHVEYEVVRTSLLPGALKTAQ 481 Query: 558 RNVDRAIAD-FAIFEVSHVYENDT-----PEGQKYMAAGIRKGSSGIEGSGRLWSDKSEE 611 N + D +FE+S V D + + A ++G E L Sbjct: 482 FNRAMPVKDGVRLFEISDVVVRDDSCDTGARNCRRLVATYMGPTAGFEIIHGLVD----- 536 Query: 612 RCRFVDLFD-AKADALSVIEPFVSL-----DSLRFESGA---PSWYHPGRSG----IIKT 658 R + L A ++ S +P + +++R+ P+++ PGR ++K Sbjct: 537 --RIMSLVQVAPSEEYSGNDPRARVGGPWRENMRYRIDPVDRPTFF-PGRCADVLLMVKD 593 Query: 659 SA--------EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + EI LG FG HP +L + L +P E+ L+ + Sbjct: 594 TEEGGSAGWREIRLGSFGMLHPEVLKAYDLRDPSSAVEIDLEPL 637 >gi|159487705|ref|XP_001701863.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] gi|158281082|gb|EDP06838.1| eukaryotic initiation factor [Chlamydomonas reinhardtii] Length = 1651 Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 3/104 (2%) Query: 42 SPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN 100 S + +VLSV+ +P D ++ +D G + VV A NV G+ ++AP G+ P + Sbjct: 161 SGLVVAEVLSVKPHPKGDRLRVVDVDWGSDMSV-VVTNALNVEEGMKVIFAPVGATTPGS 219 Query: 101 NMIVNVRKIRGIESTGMMCSEKEL-MLSDDSASIMELPIDAPVG 143 + + + ++G++S GM+CS + + + ++ LP +A VG Sbjct: 220 GLKMERKSLKGVDSFGMLCSAYDCGWVGEPDGVLVVLPDEAEVG 263 >gi|147919284|ref|YP_686980.1| hypothetical protein RCIX2602 [uncultured methanogenic archaeon RC-I] gi|110622376|emb|CAJ37654.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 222 Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust. Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 1/81 (1%) Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +R+ L L +I+ VD N VS G P FDA +S LT+R A +GE+ + + Sbjct: 83 VRRILAGKPLPTINTAVDAYNLVSALHGVPIAAFDADLLSGSLTMRFATAGEQFKGIGMK 142 Query: 294 E-YDLSPDNVVIASDGRIQSI 313 E DL P+ V+I + I +I Sbjct: 143 EPVDLKPNQVIICDEAEIIAI 163 >gi|195941650|ref|ZP_03087032.1| phenylalanyl-tRNA synthetase subunit beta [Borrelia burgdorferi 80a] Length = 566 Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust. Identities = 66/300 (22%), Positives = 129/300 (43%), Gaps = 28/300 (9%) Query: 399 YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKAD 458 Y ++ F + RL G ++ +E L+++G + + K + P +R D + D Sbjct: 287 YFQEEVEFNVENINRLLGSNLTLERICLSLKKMGVNSYSKDFKNYIIPPFYRNDFLHEVD 346 Query: 459 LVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISK 518 ++E+++ G+ E L + LS + +R V+ ++ E++ SK Sbjct: 347 VIEDVMIGEGLSSFNPE---LPKAFAVGRLSPLEEFSRNVRNLMVGMGFQEMIYNYMGSK 403 Query: 519 EQSV--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHV- 575 + + + Q L++ NP++ + +R S++P LLK+ + + IFE+ V Sbjct: 404 KDFIDRMNIDDQNFLKVSNPMTENYEYIRASIIPNLLKSESVSSNFPYPH-KIFEIGKVA 462 Query: 576 YEN-DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 +N DT E G+S L S K F+ ++ + +++ Sbjct: 463 LKNLDTTE-----------GTSTFTNLAFLMSGKEIS-------FNEINSIVATLFYYLN 504 Query: 635 LDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 ++ ES ++Y GR I +G FGE P +L+ FG+ P FEV ++ + Sbjct: 505 IEINLIESKT-TFYINGRGADIVIEG-FNIGGFGEISPYVLNNFGIFIPCSVFEVNINKL 562 >gi|289804339|ref|ZP_06534968.1| phenylalanyl-tRNA synthetase subunit beta [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 107 Score = 44.7 bits (104), Expect = 0.067, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNPDLD 59 MKF+ WL++ ++ + + + + +T GLEV+ V+ + + + +V+ ++P+ D Sbjct: 1 MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFNGVVVGEVVECAQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 + +++ G + + +VCGAPN R GL A G+ +P Sbjct: 61 KLRVTKVNVGGERLLDIVCGAPNCRQGLKVAVATIGAILP 100 >gi|303244167|ref|ZP_07330505.1| phenylalanyl-tRNA synthetase subunit beta [Methanothermococcus okinawensis IH1] gi|302485552|gb|EFL48478.1| phenylalanyl-tRNA synthetase subunit beta [Methanothermococcus okinawensis IH1] Length = 156 Score = 44.3 bits (103), Expect = 0.092, Method: Composition-based stats. Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 45/178 (25%) Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 + +E+L P S + +R S+LP LL+ N + IFEV D + Y Sbjct: 9 KYVEVLKPASLEHRVVRPSILPLLLETLYTNKHNELPQ-KIFEVGDCVVIDENDKHLYT- 66 Query: 589 AGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR--------- 639 +C+ V A ++I P + + L+ Sbjct: 67 -----------------------KCKNVGKV-----AFAIIHPNANFNELKSYAEGLLRE 98 Query: 640 --FESGAPSWYHP----GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 + +++HP GR I ++ +GYFGE HP ++ F L PI GFE+ L Sbjct: 99 IDIDYTLENYHHPSFIDGRCAKIISNEGKTIGYFGELHPEVILNFDLEYPIVGFEMEL 156 >gi|241896079|ref|ZP_04783375.1| phenylalanine--tRNA ligase beta subunit [Weissella paramesenteroides ATCC 33313] gi|241870679|gb|EER74430.1| phenylalanine--tRNA ligase beta subunit [Weissella paramesenteroides ATCC 33313] Length = 212 Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 11/132 (8%) Query: 18 LEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTG---KHQEIQ 74 +EK+ + G E V + E F + V E +PD D L++ T + +Q Sbjct: 71 VEKLNTLIKKAGFTQELVIDDEP--KFVVGYVEKAEPHPDSDH--LQVTTTVVDNDERVQ 126 Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSAS 132 +V G+PN++ G+ V A G+ +P + +I+ ++RG+ S GM+ S +EL L + Sbjct: 127 IVSGSPNMQQGIKVVVAKVGAMMP-SGLIIWPGELRGVSSDGMIVSGRELRLPNAPQVPG 185 Query: 133 IMELPID-APVG 143 + LP D APVG Sbjct: 186 ALILPDDFAPVG 197 >gi|254583520|ref|XP_002497328.1| ZYRO0F02992p [Zygosaccharomyces rouxii] gi|238940221|emb|CAR28395.1| ZYRO0F02992p [Zygosaccharomyces rouxii] Length = 594 Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust. Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 54/290 (18%) Query: 416 GIDVPIEDSLRILERLGFSVI--GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 G+++ + L+++ VI G V +P R D+ +D++E+ YG D + Sbjct: 309 GLELAPNEIAACLKKMSLDVISSGNDKTLRVLIPVTRSDILHPSDIMEDAAIGYGYDNLP 368 Query: 474 -----------SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA-MMEVVNWSFISKEQS 521 + PLP+ +V D + R+ +S+A EV+ + S +++ Sbjct: 369 KGEKLSNANFIATPLPINKVSD-------------IFRIASSQASWAEVLPLTLCSHDEN 415 Query: 522 V----LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSH-VY 576 L G + +++ NP + + +RT+LLPG+LK N ++ +FE V Sbjct: 416 FKCLRLTDDGTQAVKLANPKTLEYQVVRTTLLPGILKTVKENRKHSLP-IKVFETGDIVL 474 Query: 577 ENDTPE----GQKYMAAGIRKGSSGIE-GSGRLWSDKSEERCRFVDLFDAKADALSV-IE 630 +ND E +++ A +SG E G L R ++ + A ++ IE Sbjct: 475 KNDKLERKAFNERHWGAIHVGKTSGFELTQGLLGKIMQTFRTDWLADYGASSNGRGYWIE 534 Query: 631 PFVSLDSLRFESGAPSWYHPGRSGII-----KTSAEIVLGYFGEFHPNIL 675 SL + Y PGR + + ++G+ G HP ++ Sbjct: 535 QDESLPT----------YFPGRGARVMFRSKEGETAKMIGHLGVLHPEVM 574 >gi|27497134|gb|AAO17328.1| phenylalanyl-tRNA synthetase beta chain [Neisseria cinerea] Length = 57 Score = 44.3 bits (103), Expect = 0.096, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNP 56 M+F SWL+ + D+S +K+ LT GLEVE++D A S + +V S+E++P Sbjct: 1 MQFPYSWLRTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKSIEKHP 57 >gi|27497140|gb|AAO17332.1| phenylalanyl-tRNA synthetase beta chain [Neisseria subflava] Length = 57 Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNP 56 M+F+ SWLK DT++S +K+ LT GLEVE+ + + I +V SVE++P Sbjct: 1 MQFSYSWLKTQADTELSADKLEHLLTMSGLEVEEAETAAPVFTGVVIAEVKSVEKHP 57 >gi|149002258|ref|ZP_01827200.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] gi|147759573|gb|EDK66564.1| phenylalanyl-tRNA synthetase subunit beta [Streptococcus pneumoniae SP14-BS69] Length = 98 Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 2/82 (2%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 M + WLK+ +D DV +++ + +++ G+EVE V++ A LS + +VLS E P+ Sbjct: 1 MLISYKWLKELVDIDVPSQELAEKMSTTGIEVEGVESPAAGLSKIVVGEVLSCEDVPETH 60 Query: 60 CAILRIDTGKHQEIQVVCGAPN 81 + +++ G+ +E Q+V P Sbjct: 61 LHVCQVNVGE-EERQIVLWCPK 81 >gi|319650278|ref|ZP_08004423.1| hypothetical protein HMPREF1013_01028 [Bacillus sp. 2_A_57_CT2] gi|317398029|gb|EFV78722.1| hypothetical protein HMPREF1013_01028 [Bacillus sp. 2_A_57_CT2] Length = 222 Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust. Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 12/115 (10%) Query: 204 IKFDLDDSSLCKGFAMCCVKGVRNNVA--PNWMRQRLKAVG--------LRSISALVDIT 253 I FDL+D S+ + + + + PN R +A+ L+ +++ +DI Sbjct: 46 IYFDLEDKSVTEYEGIKEWRQIFKTAGKDPNRYRHSAEALYRRIKKQNYLQPVNSSIDIN 105 Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 N+ SL+ P V+DA ++S LT+R GE+ L+ + L+ N++I+ D Sbjct: 106 NFFSLEYQIPIGVYDADKLSGNLTIRLGKEGEEYNGLNGRPNSLA--NLIISEDA 158 >gi|156089353|ref|XP_001612083.1| phenylalanyl-tRNA synthetase, beta subunit family protein [Babesia bovis] gi|154799337|gb|EDO08515.1| phenylalanyl-tRNA synthetase, beta subunit family protein [Babesia bovis] Length = 600 Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust. Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 27/275 (9%) Query: 438 EYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL------PLTQVEDKRNLSLQ 491 E D E V R D++ DL E+I YG ++I E PLT + KR + Sbjct: 331 ETDSVEAVVSINRPDIQHACDLGEDIAIAYGYNRIAKESFNCGGLRPLTYL--KRTVRDV 388 Query: 492 QSRTRYVKRVL----ASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISADMSNMRTS 547 S Y + ++ + M + + W K G +R + + N +D+ R S Sbjct: 389 LSSCGYKETLMPILDSLVNMYDRMGWIKPDKL------GSKRPVLLKNAKVSDLEACRVS 442 Query: 548 LLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWS 606 LLPG+L T N+ A +FEV V+++D + Q I G + +G Sbjct: 443 LLPGILN-TISNLRSASLPIQVFEVGDVVWQSDESDVQAVNNCNIACGYANSSTAGLEEV 501 Query: 607 DKSEERCRFVDLFDAKADALSVIEPFVSLDS-----LRFESGAPSWYHPGRSGIIKTSA- 660 + E F ++ + E + + R E + + PGR + +SA Sbjct: 502 QGASETLLNELGFYSEYQRWELGESKIPIPEKWRHMYRLEPFDDNAFMPGRCVKLVSSAV 561 Query: 661 -EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 LG G HP+++ F + P+ E+ L I Sbjct: 562 SGATLGVMGVVHPDVVHRFHIYVPVTVLELDLSLI 596 >gi|39939083|ref|NP_950849.1| hypothetical protein PAM_597 [Onion yellows phytoplasma OY-M] gi|39722192|dbj|BAD04682.1| conserved hypothetical protein [Onion yellows phytoplasma OY-M] Length = 181 Score = 43.5 bits (101), Expect = 0.16, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 10/113 (8%) Query: 62 ILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSE 121 ++ ++TG + +++VCGA N++ G + A GS + N + +KI G+ S GM+C+ Sbjct: 69 LVEVNTGT-KVVKIVCGASNLQNGKKVIVASEGSFLEGINATLKNKKIYGVFSEGMLCAL 127 Query: 122 KELMLS--------DDSASIMELPIDA-PVGGRLSDYLELSDPIIDVSLTPNR 165 +EL +S + + + P D +G L L I+++ LTPNR Sbjct: 128 EELGISTKFLTPQEQEGIYLFDDPNDQIALGSNALIPLGLDCFILELGLTPNR 180 >gi|86358546|ref|YP_470438.1| hypothetical protein RHE_CH02944 [Rhizobium etli CFN 42] gi|86282648|gb|ABC91711.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 232 Score = 43.1 bits (100), Expect = 0.20, Method: Composition-based stats. Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%) Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAV-GLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 +GF+ +K + A + +R + L + LVD+ N VSL P VFD +I+ Sbjct: 63 RGFSRMGLKPTQYRSASEALLRRFRQEHALPRLHPLVDLCNAVSLAFAIPVAVFDTEKIA 122 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASD-GRIQS 312 L VR A E L Q P V+ A D GR + Sbjct: 123 GDLQVRHATGHETYLTFSGQSEHPEPGEVIFADDEGRAHA 162 >gi|302846702|ref|XP_002954887.1| eukaryotic translation initiation factor 5B [Volvox carteri f. nagariensis] gi|300259862|gb|EFJ44086.1| eukaryotic translation initiation factor 5B [Volvox carteri f. nagariensis] Length = 1817 Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 11/80 (13%) Query: 75 VVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKEL---------- 124 VV A NV G+ V+AP GS P + + + ++++G+ES GM+CS ++ Sbjct: 4 VVTNAANVEEGMKVVFAPVGSTTPGSGLKMERKQLKGVESFGMLCSAYDIGWIPEPDNIL 63 Query: 125 -MLSDDSASIMELPIDAPVG 143 +L D++ P +AP G Sbjct: 64 VVLPDNAVVGEPCPKEAPKG 83 >gi|281491742|ref|YP_003353722.1| tRNA-binding protein with Solo B3/4 domain [Lactococcus lactis subsp. lactis KF147] gi|281375456|gb|ADA64966.1| tRNA-binding protein with Solo B3/4 domain [Lactococcus lactis subsp. lactis KF147] Length = 233 Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust. Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 11/211 (5%) Query: 169 IGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNN 228 + ++GI + +A + + +E+ S + SE E F +++ + + K + Sbjct: 23 LTIKGIDNKVQSAVIARTQELLDSSTIKSEKHLTEDTFS--SNAIIQDWRQAFTKFKKKK 80 Query: 229 VAPNWMRQRLKAVG----LRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSG 284 A + + LK V SI+ LVDI N +SL+ G P D ++ISD++ + A G Sbjct: 81 GARSSIEALLKRVSQGQKFNSINPLVDIYNSISLEYGVPCGGEDLNKISDIMHLGTANGG 140 Query: 285 EKILALDNQEYDLSPDNVVIASD--GRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 E L + + D + VI D G I + +NTTD ++ + + IN Sbjct: 141 EAFRPLGSDKDDPALPGEVIYYDNEGAICRSFNWREAQRTMLTENTTDAIMVI---EAIN 197 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVL 373 + + I + +YR + + ++G I V Sbjct: 198 EEQQIISEQAILELKYRIQNILGIEGQIEVF 228 >gi|320536767|ref|ZP_08036769.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema phagedenis F0421] gi|320146386|gb|EFW38000.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema phagedenis F0421] Length = 581 Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust. Identities = 59/287 (20%), Positives = 120/287 (41%), Gaps = 26/287 (9%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V +L G D +E+ LER+ D + P++R D + D++E+++ VD Sbjct: 317 VNKLLGSDFSVEEITAALERMDCKTKTAGDTVTLIPPAYRNDFLHEVDIIEDVMMGKTVD 376 Query: 471 QIKSE-PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSV--LFGGG 527 + E P T LS + +R +K ++ E++ SK+ + + Sbjct: 377 FFEPEVPHEFT----IGRLSPVTALSRKIKTLMIGFGYQEMIFNYLGSKKDFIDRMNIPA 432 Query: 528 QRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYM 587 R +EI NP++ + +R S++ LL A + A+ IFE+ + ++ Sbjct: 433 DRVIEIANPMTENYQFVRPSIIANLLSAEMVS-GHAVYPHRIFEIGKI---------AFL 482 Query: 588 AAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSW 647 G+ + G L + ++ ++ A ++ + ++ + E+ P + Sbjct: 483 CEEENTGTRTRQSLGFLSASQTAN-------YNEAASLVAGLLYYLDAEYQVQEATDPRF 535 Query: 648 YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 GR I E + G FGE HP +L + ++ P E+ +++ Sbjct: 536 I-VGRQASIVHKGETI-GIFGEVHPQVLSNWDITIPCFAGELDIEAF 580 >gi|83286657|ref|XP_730257.1| phenylalanyl-tRNA synthetase subunit [Plasmodium yoelii yoelii str. 17XNL] gi|23489929|gb|EAA21822.1| phenylalanyl-tRNA synthetase subunit [Plasmodium yoelii yoelii] Length = 372 Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust. Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 3/69 (4%) Query: 398 TYKPRKIVFMNSEVKRLSGI-DVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVE 454 +K +K+ V++LSGI D+ I+D ++L+++ SV D FEV+VP +R D+ Sbjct: 302 NFKNKKLTCDIEYVRKLSGIKDITIDDVKKLLKKMMISVTDVLDNTTFEVNVPFYRSDIM 361 Query: 455 EKADLVEEI 463 D+VE+I Sbjct: 362 HACDIVEDI 370 >gi|50306631|ref|XP_453289.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642423|emb|CAH00385.1| KLLA0D05137p [Kluyveromyces lactis] Length = 595 Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust. Identities = 63/280 (22%), Positives = 115/280 (41%), Gaps = 54/280 (19%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIK-----------SEPLPLTQVEDKRNLSL 490 V +P R D+ D++E+ YG + + + LP+ ++ D Sbjct: 338 LHVEIPITRSDILHPCDIMEDAAIGYGYNNLPKGNQLSNANFVASALPINKISD------ 391 Query: 491 QQSRTRYVKRVLASRA-MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMR 545 + R+ +S+A +EV+ + S +++ F + +++ NP + + +R Sbjct: 392 -------ILRIASSQASWLEVLPLTLCSHDENFKFLRMEDDNTKAVKLANPKTLEYQVVR 444 Query: 546 TSLLPGLLKATGRNVDRAIADFAIFEVSH-VYENDTPE----GQKYMAAGIRKGSSGIE- 599 TSLLPG+LK N ++ +FE V++ND E Q++ AA ++ E Sbjct: 445 TSLLPGILKTVKENRKHSLP-IKVFEAGDVVFKNDKLERRAFNQRHWAAAYVGKTASFEI 503 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSV-IEPFVSLDSLRFESGAPSWYHPGRSGII-- 656 G L R +++ + A + IE +L + Y PGR I Sbjct: 504 IQGLLGKIMQTFRTQWLPDYGAGSTGRGYWIEKDDTLTT----------YFPGRGAKIMF 553 Query: 657 --KTSAEI-VLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 K E +G+ G HP ++ F + P G V ++S Sbjct: 554 RHKEGEEARQIGHIGVLHPEVMSNFDI--PYAGSYVEINS 591 >gi|320527169|ref|ZP_08028356.1| methionyl-tRNA synthetase [Solobacterium moorei F0204] gi|320132497|gb|EFW25040.1| methionyl-tRNA synthetase [Solobacterium moorei F0204] Length = 646 Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 12/80 (15%) Query: 48 KVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPEN-NMIVN 105 KVLS ER+PD D IL++D G + Q+V G L PG I ++ MI N Sbjct: 556 KVLSCERHPDADKLFILKVDLGDGEVRQIVSG--------LAQSYTPGQVIGKSIVMIAN 607 Query: 106 VRK--IRGIESTGMMCSEKE 123 ++ IRG+ES GM+ + KE Sbjct: 608 LQPTVIRGVESQGMLLAGKE 627 >gi|77410315|ref|ZP_00786740.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] gi|77171075|gb|EAO74519.1| phenylalanyl-tRNA synthetase, beta subunit [Streptococcus agalactiae COH1] Length = 59 Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Query: 265 HVFDASRISDVLTV-RRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGK 320 H FD + V R A +GEK++ LD +E DL D++VIA + + ++AG++GG+ Sbjct: 2 HAFDFDKFDGTTIVARNAENGEKLITLDGEERDLIADDLVIAVNDQPVALAGVMGGQ 58 >gi|283769006|ref|ZP_06341912.1| ferredoxin-fold anticodon binding domain protein [Bulleidia extructa W1219] gi|283104363|gb|EFC05740.1| ferredoxin-fold anticodon binding domain protein [Bulleidia extructa W1219] Length = 79 Score = 42.4 bits (98), Expect = 0.30, Method: Composition-based stats. Identities = 18/63 (28%), Positives = 40/63 (63%) Query: 742 RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAV 801 +++ V +FD+++G+ + +G KSVA+++ Q T +D ++ + + I+ + K+ A+ Sbjct: 17 KIVRQVDIFDIYEGEHVEKGYKSVALRIRYQDADHTLQDAEVSEVHEVILHELEKQCQAI 76 Query: 802 LRS 804 LRS Sbjct: 77 LRS 79 >gi|27497137|gb|AAO17330.1| phenylalanyl-tRNA synthetase beta chain [Neisseria flavescens] Length = 57 Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNRE-ALSPFTIVKVLSVERNP 56 M+F SWL+ + D+S +K+ LT GLEVE++D A S + +V VE++P Sbjct: 1 MQFPYSWLRTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSGVVVAEVKFVEKHP 57 >gi|323455383|gb|EGB11251.1| hypothetical protein AURANDRAFT_58678 [Aureococcus anophagefferens] Length = 616 Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust. Identities = 79/424 (18%), Positives = 158/424 (37%), Gaps = 65/424 (15%) Query: 295 YDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIIT 354 YD V+ + G + S+ II G+H+ +TTDV +E D Sbjct: 223 YDAPNYPVIRDAAGVVLSLPPIINGRHSRIQAHTTDVFIECTATD--------------- 267 Query: 355 DSRYRFERGVDLQGMIPVLKHIVSL------ILSLCGGTASDICIARNITYKPRKIVFMN 408 ++ V M+ + + ++ G + ++ PR + Sbjct: 268 ----EYKANVVCNTMVAMFSEYCAFKVEPVDVVYTSNGAVTRTVATPDLA--PRSMTAKL 321 Query: 409 SEVKRLSGI---DVPIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEE 462 +++ + G+ ++ + + E++ + D+ V+VP R D+ D+ E+ Sbjct: 322 DDIRGVVGLTDAELTARGACALAEKMQLAPATYDAATDEVTVAVPCTRSDILHAVDVAED 381 Query: 463 ILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS-KEQS 521 + YG + + P L + + + + ++ ++ +E++ EQ Sbjct: 382 VGIAYGYNNV---PEKLPKTTTTGGPTRLNAFSDLLRDEVSRAGYVEILTHGLCRLDEQF 438 Query: 522 VLFGGGQRELE------ILNPISADMSNMRTSLLPGLLKATGRNVDRAI-ADFAIFEVSH 574 G G R E + NP S + +RTSLL G LK + A+ +FEVS Sbjct: 439 DKLGHGDRADEKAKAVTLSNPSSEEFEIVRTSLLVGALKTLQHSKSHAVRGGLKLFEVSD 498 Query: 575 VYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS 634 V D AA + G + +L + + F + L+ + Sbjct: 499 VVARDA-------AADV-----GATNARKLVATYTGATAGFEVIHGLADRILACARVHYA 546 Query: 635 LDSLRFESGAPSWYHPGRSG----IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVY 690 +D + P+++ PGR + A+ +G G HP +L F + P E+ Sbjct: 547 VDPV----DDPTYF-PGRCAHIVLVASDGAKTPIGTMGIVHPAVLANFDIDYPTSAIELD 601 Query: 691 LDSI 694 ++++ Sbjct: 602 VEAL 605 >gi|42527432|ref|NP_972530.1| phenylalanyl-tRNA synthetase subunit beta [Treponema denticola ATCC 35405] gi|41818017|gb|AAS12441.1| phenylalanyl-tRNA synthetase, beta subunit [Treponema denticola ATCC 35405] Length = 584 Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 21/169 (12%) Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +EI NP+S + +R S+LP LL A + + A+ IFE + D Sbjct: 435 IEISNPMSENYQFVRNSILPSLLNAEMGSAN-AVYPHKIFETGKIAFFDD---------- 483 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 S+G S L +E+ F A+ L ++ ++ E+ P + P Sbjct: 484 --SNSTGTSTSQSLGFLTAEQNANFNTAASEAANLLY----YLGIEYKVCETDDPRFI-P 536 Query: 651 GR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQ 698 GR +G++ +I G FGE HP +L+ + ++ P E+ ++ I SQ Sbjct: 537 GRQAGLLYNGEQI--GIFGEVHPQVLENWDINIPCFAGELNIEKILKSQ 583 >gi|281203049|gb|EFA77250.1| phenylalanine-tRNA ligase [Polysphondylium pallidum PN500] Length = 628 Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust. Identities = 95/437 (21%), Positives = 167/437 (38%), Gaps = 80/437 (18%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY--- 358 V+ S+ + S+ II G H+ NT +V +EV D A N+ + S Y Sbjct: 233 VIYDSNNTLLSLPPIINGDHSKITLNTKNVFIEVTATDYTK-ANIVLNIMLTMFSEYCKL 291 Query: 359 --RFERG--VDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRL 414 E+ VD+ G + I ++ I + +Y + + Sbjct: 292 PFTMEQVEVVDVDGTTKLFPQI------------DEVEIKASTSY-----------INKC 328 Query: 415 SGIDVPIEDSLRILERLGFSVIGEYDK--FEVSVPSWRQDVEEKADLVEEILRIYGVDQI 472 G+ + + + +L+R+ DK VSVPS R D+ + D++E++ YG + I Sbjct: 329 IGVQLEPTNMIEMLKRMSLDSQLSQDKQTITVSVPSTRSDIIHECDIMEDVAIGYGFNNI 388 Query: 473 ----KSEPL-----PLTQVEDKRNLSLQQS-RTRYVKRVLASRAMMEVVNWSFISKEQSV 522 + P P+ ++ + + Q+ T + VL S N+S I+++ Sbjct: 389 PRVVPNTPTTGRIQPINKLSELLAAEVAQAGFTEIMTFVLCSNKD----NYSLINRDDD- 443 Query: 523 LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE 582 ++I N + D S +RTSL LLK+ N + +FEV + + Sbjct: 444 -----NNSVKIANYLHEDFSEIRTSLTNTLLKSVVSNKALPLP-LKLFEVGDISIKGS-T 496 Query: 583 GQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES 642 G K +A S + R+ +++ D L +SL+ Sbjct: 497 GNKNLADPNNNNSDTGSYNKRMLGAIYCNHSARIEVVHGILDKL-----MLSLNIKHISD 551 Query: 643 GAPSWY------HPGRSGIIKT--SAEIV-----LGYFGEFHPNILDFFGLSNP--ICGF 687 S Y P + T A+I+ +G G HP +L +G+S P + F Sbjct: 552 KTASAYGKKYQLKPNNDKLFMTGMGADILVDDKKIGVLGVVHPTVLKNYGISYPCSLLEF 611 Query: 688 EVYLD-----SIPISQK 699 EV ++ PI +K Sbjct: 612 EVNMELASCIQYPIQKK 628 >gi|18312794|ref|NP_559461.1| phenylalanyl-tRNA synthetase subunit beta [Pyrobaculum aerophilum str. IM2] gi|24418716|sp|Q8ZWQ7|SYFB_PYRAE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|18160278|gb|AAL63643.1| phenylalanyl-tRNA synthetase beta subunit [Pyrobaculum aerophilum str. IM2] Length = 515 Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust. Identities = 80/412 (19%), Positives = 157/412 (38%), Gaps = 76/412 (18%) Query: 283 SGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPIN 342 G + L N+E +P +V AS G+I + ++G + + T DVL++V Sbjct: 176 QGRRYSGLINRE---NPPALVDAS-GQIMVVIPVLGSECCKITEATRDVLIDVT------ 225 Query: 343 IARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICI-ARNITYKP 401 G D + + L ++ +L G +I +++ Sbjct: 226 --------------------GTDHRAVANALSILIYSLLERSGSKEVEIVEGGTGYSHEY 265 Query: 402 RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVE 461 KI V G+ + ED ++ +++ F +Y + V +P +R +V D+ E Sbjct: 266 VKIYVDERAVSEFLGVKIAHEDFIKYIKKARF----DYQEGAVIIPPYRINVLSWVDVAE 321 Query: 462 EILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 ++ + G +Q+ E +P +R+ + + T V++ + S E+ N+ + + Sbjct: 322 DVAIVMGYNQMPRE-VPEIPSAGRRHRT--EVITLEVRKSMLSMGFTELNNYVLTDEAVA 378 Query: 522 VLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTP 581 + + + NPIS + +R S++ L+ A R F + EV V E T Sbjct: 379 EVCSPAR----VANPISELYTTIRCSIITQLISAASALKRRETKIFEVGEV--VREGRTV 432 Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR-- 639 ++ + R G++ D LSV++ L+ Sbjct: 433 RALAFLIS--RDGAT-------------------------LTDGLSVVKSLCKRLGLKCE 465 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYL 691 F W P R ++ + GY E +P++L + P E+Y+ Sbjct: 466 FFPAEAKWALPNRMAEVRGE---ITGYIAEVNPDVLTALKHAVPTVVAELYI 514 >gi|303244168|ref|ZP_07330506.1| phenylalanyl-tRNA synthetase, beta subunit [Methanothermococcus okinawensis IH1] gi|302485553|gb|EFL48479.1| phenylalanyl-tRNA synthetase, beta subunit [Methanothermococcus okinawensis IH1] Length = 405 Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust. Identities = 50/227 (22%), Positives = 96/227 (42%), Gaps = 32/227 (14%) Query: 302 VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFE 361 +++ DG + S+ II G NT ++L+++ D + + L I+ + + Sbjct: 202 IILDKDGNVLSMPPIINGNLTKITTNTRNLLIDITGTDKNAVENT---LNILVSAFA--D 256 Query: 362 RGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKI--VFMNSEVKRLSGIDV 419 RG I + DI I ++T K ++ F+N KRL G+D+ Sbjct: 257 RG--------------GTIYKVIVKDKKDIKIYPDLTPKTDEVDLEFIN---KRL-GLDL 298 Query: 420 PIEDSLRILERLGFSVIGEYDKFE--VSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 + + L + Y+K V +P++R D+ K D EE+ YG D+ + Sbjct: 299 NPGEVINALRKARMDAEYNYEKNNIIVKIPAYRVDILHKVDFTEEVAIHYGYDKFTGKFP 358 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLF 524 + + +K L + + +++ ++ EV+N + Q VLF Sbjct: 359 HVATIGEKHTL---EKKFDFIRNIMIGYGFFEVMNLTL--SNQEVLF 400 >gi|288918248|ref|ZP_06412603.1| t-RNA-binding domain protein [Frankia sp. EUN1f] gi|288350418|gb|EFC84640.1| t-RNA-binding domain protein [Frankia sp. EUN1f] Length = 180 Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust. Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 27/155 (17%) Query: 5 LSWLKDHLDTDVSLEK-ICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNP----DL 58 +SWL++ + + K + + L G EVE ++ + L+ + +V+S+E P D+ Sbjct: 1 MSWLREVVGAPLPPAKAVAEALIRAGFEVEGLETVGSDLAGVVVGEVVSIEVVPTKKKDV 60 Query: 59 DCAILRI--------------DTGKHQEIQ------VVCGAPNVRVGLLGVWAPPGSCIP 98 +R+ E+ V+CGA N VG A PGS +P Sbjct: 61 RWCQVRVAELGAADASGAPDASGAAGAEVSEPGVRGVICGAFNFEVGDRVPVALPGSVLP 120 Query: 99 ENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASI 133 ++ RK G S GM+CS +EL L DD + I Sbjct: 121 -GGFEISSRKTYGHVSDGMICSARELGLGDDHSGI 154 >gi|256847518|ref|ZP_05552964.1| tRNA-binding domain-containing protein [Lactobacillus coleohominis 101-4-CHN] gi|256716182|gb|EEU31157.1| tRNA-binding domain-containing protein [Lactobacillus coleohominis 101-4-CHN] Length = 212 Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust. Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 16/123 (13%) Query: 12 LDTDVSLEKICDTLTSIGLEVEKVDNREALSPFT--IVKVLSVER---NPDLD-CAILRI 65 LD D ++KI LT+ G ++ + P T +V VE+ +P D I + Sbjct: 69 LDAD-QIDKINAHLTAAGF-------KQLIEPATQPHFQVGYVEKMIDHPKSDHLHIATV 120 Query: 66 DTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELM 125 D G + Q+VCG+ N+R + V A G+ +P N ++ K+ G+ES GM+C+ +EL Sbjct: 121 DFGSEKR-QIVCGSVNLRENIKVVAATVGTMMP-NGKLIWPGKLLGVESDGMICTPRELG 178 Query: 126 LSD 128 L + Sbjct: 179 LKN 181 >gi|15674160|ref|NP_268335.1| hypothetical protein L36841 [Lactococcus lactis subsp. lactis Il1403] gi|12725240|gb|AAK06276.1|AE006446_8 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 235 Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 77 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 135 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 136 GGEHFLALGDDEAD 149 >gi|300072029|gb|ADJ61429.1| hypothetical protein LLNZ_12730 [Lactococcus lactis subsp. cremoris NZ9000] Length = 235 Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 77 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 135 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 136 GGEHFLALGDDEAD 149 >gi|221101983|ref|XP_002169607.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 238 Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 64/179 (35%), Gaps = 28/179 (15%) Query: 526 GGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQK 585 G + I NP D RT+LL G+LK N + +FE+S V D+ + Sbjct: 77 GLNEAVHIENPKGLDFEVARTTLLSGMLKTVANNKSHPLP-VQVFEISDVVLLDSTK--- 132 Query: 586 YMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAP 645 G RL + C F+ L + +++ S Sbjct: 133 ---------DVGARNERRLCAIN----CNKTPGFEVIHGLLDRLMTVLAVKPTNIASAPS 179 Query: 646 SWYH----------PGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 YH PGR I + V+G G HP +L F ++NP FE+ ++ Sbjct: 180 EGYHIRKSEDSAFFPGRCAEIVYNG-TVIGKMGVIHPEVLQNFEIANPCAAFEINMEHF 237 >gi|125625219|ref|YP_001033702.1| hypothetical protein llmg_2463 [Lactococcus lactis subsp. cremoris MG1363] gi|124494027|emb|CAL99027.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] Length = 239 Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 81 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 139 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 140 GGEHFLALGDDEAD 153 >gi|116513128|ref|YP_812035.1| Solo B3/4 domain-containing protein [Lactococcus lactis subsp. cremoris SK11] gi|116108782|gb|ABJ73922.1| Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta [Lactococcus lactis subsp. cremoris SK11] Length = 239 Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 81 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 139 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 140 GGEHFLALGDDEAD 153 >gi|302035780|ref|YP_003796102.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Nitrospira defluvii] gi|300603844|emb|CBK40176.1| Phenylalanyl-tRNA synthetase, beta subunit [Candidatus Nitrospira defluvii] Length = 572 Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust. Identities = 60/272 (22%), Positives = 113/272 (41%), Gaps = 27/272 (9%) Query: 428 LERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRN 487 L+ G++V K V +P +R D+ D+VE++ G + P+ +Q Sbjct: 319 LKSYGYTVKSAGQKVAVQLPPYRNDLLHTVDVVEDVAISQGYARFA--PVMPSQFTVGGL 376 Query: 488 LSLQQSRTRYVKRVLASRAMMEVVNWSFISKE---QSVLFGGGQ--RELEILNPISADMS 542 L+Q R V+ ++ E+++ S + + G + + +E+ N +S S Sbjct: 377 SRLEQMADR-VRHLMVGLEFQEIISNIMGSHQDFCTRMRLDGTEWAKVVEVDNVMSLSYS 435 Query: 543 NMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSG 602 +R + P LL+ N RA +FEV V PE A + GS + G Sbjct: 436 CLRQWITPSLLQVEA-NSSRAFYPHRMFEVGEV---AIPE------ASVDVGSRTVTMLG 485 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 + + F ++ L ++ +L+ + S + GR+G I ++ Sbjct: 486 AVIAHAG---AHFSEIHSCLDLLLYYLDRPFTLEPVEHPS-----FLDGRAGKIVSNGR- 536 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 V+G GE HP +L+ + + P E+ +D + Sbjct: 537 VIGLLGELHPEVLEHWQIGVPAVALELEIDRL 568 >gi|242082231|ref|XP_002445884.1| hypothetical protein SORBIDRAFT_07g027440 [Sorghum bicolor] gi|241942234|gb|EES15379.1| hypothetical protein SORBIDRAFT_07g027440 [Sorghum bicolor] Length = 470 Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 95/236 (40%), Gaps = 27/236 (11%) Query: 467 YGVDQI-KSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRA---MMEVVNWSFISKEQSV 522 YG + + KS+P +T + +Q R+ ++ A A MEV+ + S E++ Sbjct: 253 YGFNNVPKSKPKCMT-------IGGRQPLNRFSDKIRAEVARAGYMEVLTFILSSHEENF 305 Query: 523 LF----GGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEN 578 + + I NP +++ +RTSL+ LLK N+D IFEV V Sbjct: 306 DMLNRADDKSKAVIIANPRTSEFEVVRTSLMSCLLKTLKHNIDHP-RPIKIFEVGDVVML 364 Query: 579 DTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSL 638 D+ G+S L+ ++ + L D+ + P V+ Sbjct: 365 DSSRDV---------GASNNRRLAALYCNRVSGFEEIMGLVDSIVKVVRA--PHVNFGKN 413 Query: 639 RFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + + P R I TS +GY G H +L FG+ +P E+ L+++ Sbjct: 414 YYVPTDEPEFFPKRQCKIVTSDGKQVGYLGIVHAEVLRKFGIPDPCTFVEMDLEAL 469 >gi|326407754|gb|ADZ64825.1| tRNA-binding protein [Lactococcus lactis subsp. lactis CV56] Length = 235 Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 77 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 135 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 136 GGEYFLALGDDEAD 149 >gi|325473693|gb|EGC76882.1| phenylalanyl-tRNA synthetase [Treponema denticola F0402] Length = 584 Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust. Identities = 63/296 (21%), Positives = 118/296 (39%), Gaps = 44/296 (14%) Query: 411 VKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVD 470 V +L G E+ L+R+ +K + +R D + D++E+++ V+ Sbjct: 316 VNKLLGSSFKAEEIADALKRMDLETEISGNKIRLKPSPYRNDFLHEVDIIEDVMMGKTVN 375 Query: 471 QIKSEP---------LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS 521 E LP T + +R +K ++ E++ SK+ Sbjct: 376 FFTPETPNEFTIGRLLPATML------------SRKIKGLMTGMGYQEMIFNYLGSKKDY 423 Query: 522 V--LFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + + +EI NP+S + +R S+LP LL A + + A+ IFE + D Sbjct: 424 IERMCIDEASVIEISNPMSENYQFVRNSILPSLLNAEMGSAN-AVYPHKIFETGKIAFFD 482 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR 639 S+G S L +E+ F A+ L ++ ++ Sbjct: 483 D------------SNSTGTSTSQSLGFLTAEQNANFNTAASEAANLLY----YLGIEYKV 526 Query: 640 FESGAPSWYHPGR-SGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 E+ P + PGR +G++ +I G FGE HP +L+ + ++ P E+ ++ I Sbjct: 527 CETDDPRFI-PGRQAGLLYNGEQI--GIFGEVHPQVLENWDINIPCFAGELNIEKI 579 >gi|21539815|gb|AAL02356.1| YdjD [Lactococcus lactis subsp. cremoris] Length = 207 Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 81 NVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DSASIMEL 136 N +GL V A PG+ +P N ++ +RG++S GM+CS +EL L D D I+EL Sbjct: 133 NASLGLKTVAALPGAMMP-NGALIFPGALRGVQSYGMLCSARELELPDAPDVRGIIEL 189 >gi|190892692|ref|YP_001979234.1| hypothetical protein RHECIAT_CH0003108 [Rhizobium etli CIAT 652] gi|190697971|gb|ACE92056.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 230 Score = 41.2 bits (95), Expect = 0.78, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 2/101 (1%) Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAV-GLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 +GF+ +K + A + +R + L + LVD+ N VSL P VFD ++I+ Sbjct: 63 RGFSRMGLKPTQYRSASEALLRRFRQEHALPRLHPLVDLCNAVSLAFAIPIAVFDVAKIA 122 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIA 314 L VRRA E L P+ V+ A DG ++ A Sbjct: 123 GDLEVRRATGDETYLTFGGDIEHPEPNEVIFA-DGEARAHA 162 >gi|317497548|ref|ZP_07955866.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] gi|316895107|gb|EFV17271.1| phenylalanyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA] Length = 122 Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 4/90 (4%) Query: 1 MKFTLSWLKDHL-DTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDL 58 M +SW+K ++ D D + ++ D +T G +E V + L + K+ +E++PD Sbjct: 1 MDTPISWIKAYVPDLDCTPQEYADKMTLSGSNMESVTYLDKNLEKIVVGKIEKIEKHPDA 60 Query: 59 DCAIL-RIDTGKHQEIQVVCGAPNVRVGLL 87 D I+ +++ G + +Q+V GAPNV G L Sbjct: 61 DKLIICQVNVG-DETVQIVTGAPNVSEGDL 89 >gi|299783435|gb|ADJ41433.1| EMAP domain-containing protein [Lactobacillus fermentum CECT 5716] Length = 85 Score = 40.8 bits (94), Expect = 0.88, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCG+PN+ + + A G+ +P + I+ ++ G+ES GM+C+ +EL L + D Sbjct: 1 MQIVCGSPNIENHVKVIVAKVGAMMP-SGQIIWPGELVGVESDGMICAGRELNLKNAPDK 59 Query: 131 ASIMELPIDAPVGGRLSDY 149 + LP D G D+ Sbjct: 60 PGCVILPADFGQPGDAFDF 78 >gi|281492835|ref|YP_003354815.1| tRNA-binding protein [Lactococcus lactis subsp. lactis KF147] gi|281376487|gb|ADA65973.1| tRNA-binding protein [Lactococcus lactis subsp. lactis KF147] Length = 235 Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R+++ N +++ K + SI+ LVDI N +SL+ G P+ D + L + +A Sbjct: 77 KGARSSI-ENLLKRVDKGKAVGSINPLVDIYNSISLNYGLPAGGEDIDTFAGNLRLTKAV 135 Query: 283 SGEKILALDNQEYD 296 GE LAL + E D Sbjct: 136 GGEHFLALGDVEAD 149 >gi|257097716|pdb|3IG2|A Chain A, The Crystal Structure Of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis To 2.1a gi|257097717|pdb|3IG2|B Chain B, The Crystal Structure Of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis To 2.1a gi|257097718|pdb|3IG2|C Chain C, The Crystal Structure Of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis To 2.1a gi|257097719|pdb|3IG2|D Chain D, The Crystal Structure Of A Putative Phenylalanyl-Trna Synthetase (Phers) Beta Chain Domain From Bacteroides Fragilis To 2.1a Length = 213 Score = 40.8 bits (94), Expect = 1.0, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%) Query: 531 LEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + +LNP+SAD++ R +LL G L++ N +R AD FE + Y D Sbjct: 48 VXLLNPLSADLNCXRQTLLFGGLESIAHNANRKNADLKFFEFGNCYHFD 96 >gi|327189673|gb|EGE56821.1| hypothetical protein RHECNPAF_5600011 [Rhizobium etli CNPAF512] Length = 230 Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAV-GLRSISALVDITNYVSLDRGYPSHVFDASRIS 273 +GF+ +K + A + +R + L + LVD+ N VSL P VFD +I+ Sbjct: 63 RGFSRMGLKPTQYRSASEALLRRFRQEHALPRLHPLVDLCNSVSLAFAIPIAVFDVEKIA 122 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIA 314 L VRRA E L P+ V+ A DG ++ A Sbjct: 123 GDLEVRRATGDETYLTFGGDIEHPEPNEVIFA-DGEARAHA 162 >gi|84997553|ref|XP_953498.1| phenylalanyl-tRNA synthetase [Theileria annulata strain Ankara] gi|65304494|emb|CAI76873.1| phenylalanyl-tRNA synthetase, putative [Theileria annulata] Length = 629 Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust. Identities = 78/314 (24%), Positives = 121/314 (38%), Gaps = 58/314 (18%) Query: 409 SEVKRLSGI-DVPIEDSLRILERLGF-SVIGEYDKFEVSVPSWRQDVEEKADLVEEILRI 466 S + +L GI ++ E S +L R+ S+ + + E VP R D++ DL E+I Sbjct: 322 SYLSKLVGIKELTAEYSCDLLGRMMVKSLPVDSETIEAMVPITRSDIQHPCDLGEDIAIA 381 Query: 467 YGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFIS--------- 517 YG IK + + K +L + R+V + + + V SF S Sbjct: 382 YGYKNIKRNRFTMGNLLKK---TLLADKVRFVFTSCSFKETLMPVLDSFKSSYEMMCKPF 438 Query: 518 -----KEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEV 572 K V+ GQ ++ +RTSLLPGLLK + +FEV Sbjct: 439 PKDNDKRAPVVIKNGQL---------SENETVRTSLLPGLLKTVHYKKGSNLP-IRLFEV 488 Query: 573 SHVY----------ENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDK----SEERCRFVDL 618 V +N+T G Y A G ++G L + SE + + Sbjct: 489 GEVVWRSEDSDVGAKNNTNCGCVY--ANTSSGLEEVQGVSELLLNNLGFISEYQVWEYNE 546 Query: 619 FD-------AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI--VLGYFGE 669 FD + L IE + L+F+ + + PGR T++E G G Sbjct: 547 FDKPIPESWKQRYKLEEIEG----NFLKFQKLSDPSFLPGRCVSFVTTSEPRQTFGTMGI 602 Query: 670 FHPNILDFFGLSNP 683 HPN+L F + P Sbjct: 603 IHPNVLKNFHIPFP 616 >gi|302867738|ref|YP_003836375.1| B3/4 domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302570597|gb|ADL46799.1| B3/4 domain protein [Micromonospora aurantiaca ATCC 27029] Length = 235 Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAVG-LRSISALVDITNYVSLDRGYPSHVFDASRIS 273 + FA R A + +RL+ G L + LVD+ N +S+ P V D +RI Sbjct: 63 RAFARMGCPPTRYRCAAESLLRRLRRDGDLPRLHPLVDLGNALSVRYAAPVAVLDVARIG 122 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 LTVR A E L L +P V+ A G Sbjct: 123 GDLTVRPADGTESYLGLGGDSEQPAPGEVIFADQG 157 >gi|55379556|ref|YP_137406.1| phenylalanyl-tRNA synthetase subunit beta [Haloarcula marismortui ATCC 43049] gi|74552488|sp|Q5UYF3|SYFB_HALMA RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|55232281|gb|AAV47700.1| phenylalanyl-tRNA synthetase beta chain [Haloarcula marismortui ATCC 43049] Length = 584 Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust. Identities = 60/275 (21%), Positives = 102/275 (37%), Gaps = 50/275 (18%) Query: 442 FEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYV--- 498 ++V VP +R DV D++++I R G + ++ ++ V + S + R Sbjct: 337 YDVEVPPYRVDVIHPLDIIDDIGRALGFNSLEPTYPDVSTVGGRHERSRLEDAARDALVG 396 Query: 499 ---KRVLASRAMMEVVNWSFISKEQSVLFGGGQRE-------LEILNPISADMSNMRTSL 548 + +L EV N+ ++ G + + I P S D + +RT Sbjct: 397 LGFEDLLNFHMTNEVENFERMNLSTPEAEDGNDADTVGLADPVTIQEPYSEDYTILRTWA 456 Query: 549 LPGLLKATGRNVDRA----IADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRL 604 LP ++ N R+ +A+ + EN + +AA + + + E + Sbjct: 457 LPSIMMVLENNTHRSYPQDLAEIGLAAGLDDSENTGVAEHRTVAAALARTDASYEDA--- 513 Query: 605 WSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVL 664 + R L DA L P HP S I +AE+VL Sbjct: 514 -------KARLQALADAFDKDLET----------------PPTTHP--SFIGGRAAEVVL 548 Query: 665 -----GYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 G GE HP +L L P+ FE LD++ Sbjct: 549 DGESVGVIGEIHPKVLVEHDLELPVAAFEFRLDAL 583 >gi|255023964|ref|ZP_05295950.1| tRNA-binding domain protein [Listeria monocytogenes FSL J1-208] Length = 169 Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust. Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 7/105 (6%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSP-FTIVKVLSVERNPDLD-CAILRIDTGKHQ 71 T+ + ++ + G E E V + LSP F + V + E++P+ D + +I+ G + Sbjct: 70 TEELVSQMNQVIEKAGFEPEIVAD---LSPKFVVGYVEAKEKHPNADKLNVCKINVG-DE 125 Query: 72 EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTG 116 +Q+VCGAPN+ G V A G+ +P + +I+ +RG +S G Sbjct: 126 VLQIVCGAPNIDAGQKVVVAKIGAVMP-SGLIIKPSNLRGEDSFG 169 >gi|294670488|ref|ZP_06735368.1| hypothetical protein NEIELOOT_02206 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307767|gb|EFE49010.1| hypothetical protein NEIELOOT_02206 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 61 Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 34/49 (69%) Query: 743 LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIV 791 ++ ++T+FDV++G L E KS+A++V++Q +DT D+ + ++ +V Sbjct: 1 MLREITLFDVYRGAGLPENHKSMALKVILQSTEDTLTDEVVEPIVAELV 49 >gi|330827519|ref|XP_003291822.1| hypothetical protein DICPUDRAFT_50060 [Dictyostelium purpureum] gi|325077978|gb|EGC31656.1| hypothetical protein DICPUDRAFT_50060 [Dictyostelium purpureum] Length = 611 Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust. Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 30/295 (10%) Query: 416 GIDVPIEDSLRILERLGFS--VIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIK 473 GI++ + + +L+R+ + + VSVP R D+ D++E++ YG + + Sbjct: 320 GINIQPTEMVSMLKRMSLESKLSSDSKSVTVSVPVTRSDIMHACDVMEDVAIGYGYNNLV 379 Query: 474 SEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQR---- 529 E +P T + + + S + LA E++ + + + FGG + Sbjct: 380 KE-IPKTHTQGRIQPINKLSELLSAEVALA--GFTEIMTFVLCQNQDN--FGGLNKVEDG 434 Query: 530 -ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMA 588 ++I N +S + + +RT+L+ L+K+ N A +FE+S V + + Sbjct: 435 SSVKIANAVSEEFTEVRTNLINSLMKSVVSN-KAAPLPLKLFELSDVSVKGSTGNKDLTD 493 Query: 589 AGIRKGSSGIEGS---GRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLR------ 639 G G ++ S + L D +L+ I+P D+ R Sbjct: 494 PNSNNSDVGAYNKRMLGAIYCANSAKIEVIHGLLDRVMLSLN-IKP----DTTRSGKGYY 548 Query: 640 FESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP--ICGFEVYLD 692 E G + PG I + + V GY G HP +L +G P + EV +D Sbjct: 549 LEIGTDKVFLPGTCINIIVNGKKV-GYMGIIHPIVLKNYGCPFPCTVLELEVTMD 602 >gi|294658350|ref|XP_460688.2| DEHA2F07590p [Debaryomyces hansenii CBS767] gi|202953066|emb|CAG89025.2| DEHA2F07590p [Debaryomyces hansenii] Length = 590 Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust. Identities = 42/202 (20%), Positives = 93/202 (46%), Gaps = 37/202 (18%) Query: 393 IARNITYKP--RKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSV--IGEYDKFEVSVPS 448 I +I+ +P +I ++NS + G+D+ ++ +L+R+ + D ++ +P Sbjct: 286 ITPDISARPFEAEIPYINSCL----GLDLTGQEISDLLKRMSLHAKPSSKKDLIDIGIPI 341 Query: 449 WRQDVEEKADLVEEILRIYGV----------DQIKSEPLPLTQVEDKRNLSLQQSRTRYV 498 R D+ + D++E+ YG D + + PLP+ ++ D + Sbjct: 342 TRPDILHQCDIMEDAAIAYGYNNLTKTKAKGDSLVAAPLPVNKIGD-------------I 388 Query: 499 KRVLASRA-MMEVVNWSFISKEQSVLF----GGGQRELEILNPISADMSNMRTSLLPGLL 553 R+ +++A +EV+ + S +++ F +++ NP + + +RT+L+PGLL Sbjct: 389 LRIASAQAGYLEVLPLTLCSHDENFKFLRTKDDNTTAVKLENPKTIEYQVVRTTLVPGLL 448 Query: 554 KATGRNVDRAIADFAIFEVSHV 575 K N ++ +FE + Sbjct: 449 KTIKENRKHSLP-IKVFEAGDI 469 >gi|291458590|ref|ZP_06597980.1| putative B3/4 domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291419123|gb|EFE92842.1| putative B3/4 domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 253 Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 10/103 (9%) Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQ 293 +R+ + G+ ++ +VD+ N +SL G +D SRI + +RRA +GE + Sbjct: 120 LRRVKRGEGIPPVNTVVDVNNMISLQSGLSLGSYDLSRIKGAVRLRRAGAGEGYRGIGKD 179 Query: 294 EYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 D+ +N+++ SD GI G + D+T +L E A Sbjct: 180 FLDM--ENMLVLSDDE-----GIFGSSMS---DSTRAMLTEDA 212 >gi|227523647|ref|ZP_03953696.1| possible tRNA ligase [Lactobacillus hilgardii ATCC 8290] gi|227089219|gb|EEI24531.1| possible tRNA ligase [Lactobacillus hilgardii ATCC 8290] Length = 234 Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R V N +++ K +RSI LVD+ N +SL G+P D +I +++ A Sbjct: 76 KGARFAVE-NLLKRAKKGNPVRSIDPLVDLYNAISLRTGFPIGALDLDKIKGGISLEVAK 134 Query: 283 SGEKILALDNQEYDLS-PDNVVIASDGRIQS 312 GE A+ + D + P V+ D + S Sbjct: 135 GGESFTAIGEDQPDPALPGEVIYRDDEAVTS 165 >gi|227511445|ref|ZP_03941494.1| possible tRNA ligase [Lactobacillus buchneri ATCC 11577] gi|227085301|gb|EEI20613.1| possible tRNA ligase [Lactobacillus buchneri ATCC 11577] Length = 234 Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R V N +++ K +RSI LVD+ N +SL G+P D +I +++ A Sbjct: 76 KGARFAVE-NLLKRAKKGNPVRSIDPLVDLYNAISLRTGFPIGALDLDKIKGGISLEVAK 134 Query: 283 SGEKILALDNQEYDLS-PDNVVIASDGRIQS 312 GE A+ + D + P V+ D + S Sbjct: 135 GGESFTAIGEDQPDPALPGEVIYRDDEAVTS 165 >gi|227508435|ref|ZP_03938484.1| possible tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227192085|gb|EEI72152.1| possible tRNA ligase [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 234 Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Query: 223 KGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRAC 282 KG R V N +++ K +RSI LVD+ N +SL G+P D +I +++ A Sbjct: 76 KGARFAVE-NLLKRAKKGNPVRSIDPLVDLYNAISLRTGFPIGALDLDKIKGGISLEVAK 134 Query: 283 SGEKILALDNQEYDLS-PDNVVIASDGRIQS 312 GE A+ + D + P V+ D + S Sbjct: 135 GGESFTAIGEDQPDPALPGEVIYRDDEAVTS 165 >gi|289673304|ref|ZP_06494194.1| phenylalanyl-tRNA synthetase subunit beta [Pseudomonas syringae pv. syringae FF5] Length = 65 Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 42 SPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIP 98 S + +VLS E++PD D + + + QVVCGAPNVR GL +A G+ +P Sbjct: 1 SGVVVGEVLSTEQHPDADKLRMCQVSNGSETFQVVCGAPNVRPGLKIPFAMIGAELP 57 >gi|291333359|gb|ADD93065.1| hypothetical protein [uncultured archaeon MedDCM-OCT-S05-C10] Length = 281 Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust. Identities = 70/284 (24%), Positives = 116/284 (40%), Gaps = 53/284 (18%) Query: 426 RILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDK 485 R ER + IG+ + +P WR D+ DLVEE+ G + + E Sbjct: 27 RKAERWADAAIGDLIHV-IEMPRWRFDLLHPIDLVEEVATGIGYESLG---------EAT 76 Query: 486 RNLSLQQ---SRTRYVKRV---LASRAMMEVVNWSFISKEQSVLFG-----GGQRELEIL 534 L+L+ +R+ V+R+ L+S+ + +V + + + E V FG I Sbjct: 77 STLALEGKPLARSALVRRINESLSSQGIQQVQSLTLSNDE--VQFGRMRWMPDNAVTRIA 134 Query: 535 NPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQ-KYMAAGIRK 593 NPI+ D + +R S+LP LL N + + E V + + + + A I Sbjct: 135 NPITNDHTILRQSVLPSLLSLLSANQHHELPQ-RVQECGEVVRDHSNRWRVSWACAEIGT 193 Query: 594 GSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFES---GAPSWYHP 650 G +G AK A +++ + D + F + G W P Sbjct: 194 GFTG-----------------------AKGIAQALMRDLGARDEVSFHAIDDGVGPWI-P 229 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 GR +K EI +G FGE P + + FGL PI E ++++ Sbjct: 230 GRGAKVKV-GEIFVGEFGEIDPKVSEKFGLKVPIQAGEFDVEAL 272 >gi|315505860|ref|YP_004084747.1| b3/4 domain protein [Micromonospora sp. L5] gi|315412479|gb|ADU10596.1| B3/4 domain protein [Micromonospora sp. L5] Length = 235 Score = 39.3 bits (90), Expect = 3.0, Method: Composition-based stats. Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Query: 215 KGFAMCCVKGVRNNVAPNWMRQRLKAVG-LRSISALVDITNYVSLDRGYPSHVFDASRIS 273 + FA R A + +RL+ G L + LVD+ N +S+ P V D +RI Sbjct: 63 RAFARMGCPPTRYRCAAESLLRRLRRDGDLPRLHPLVDLGNALSVRCAVPVAVLDLARIG 122 Query: 274 DVLTVRRACSGEKILALDNQEYDLSPDNVVIASDG 308 LTVR A E L L +P V+ A G Sbjct: 123 GDLTVRPADGTESYLGLGGDSEQPAPGEVIFADQG 157 >gi|224170008|ref|XP_002339332.1| predicted protein [Populus trichocarpa] gi|222874887|gb|EEF12018.1| predicted protein [Populus trichocarpa] Length = 251 Score = 39.3 bits (90), Expect = 3.1, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 10/61 (16%) Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGR 603 ++T PG L++TG+N+D A+A FEVS TP G Y R+GS ++ GR Sbjct: 70 VQTDHRPGTLRSTGQNLDVALAGAGYFEVS------TPGGPAYT----RQGSFRLDAQGR 119 Query: 604 L 604 L Sbjct: 120 L 120 >gi|255592000|ref|XP_002535648.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] gi|223522414|gb|EEF26735.1| Flagellar basal-body rod protein flgG, putative [Ricinus communis] Length = 230 Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 10/61 (16%) Query: 544 MRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGR 603 ++T PG L++TG+N+D A+A FEVS TP G Y R+GS ++ GR Sbjct: 81 VQTDHRPGTLRSTGQNLDVALAGAGYFEVS------TPGGPAYT----RQGSFRLDAQGR 130 Query: 604 L 604 L Sbjct: 131 L 131 >gi|206603260|gb|EDZ39740.1| Phenylalanyl-tRNA synthetase beta chain [Leptospirillum sp. Group II '5-way CG'] Length = 569 Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust. Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 38/265 (14%) Query: 440 DKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVK 499 D + V P +R D+ D VE+ L G LP + K + + T V+ Sbjct: 324 DGYLVRAPFYRDDILHPVDCVEDFLISRGYASFAPT-LPASFTVGKEDPARTPEET--VR 380 Query: 500 RVLASRAMMEVVN--WSFISKEQSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATG 557 R++ E+++ + I K+ + L +EI NP+S +R++LL LL + Sbjct: 381 RLMTGLGFQEILSNILTSIEKDTTDLGRPSDTTVEIDNPVSRQYGVVRSTLLSFLLSSET 440 Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 ++ R +FEV E T G+S + E+ F Sbjct: 441 QS-SRFPYPHRLFEVGEALEKIT-------------GTSSV----------VREKMLFSG 476 Query: 618 LFDAKADALSVIEPFVSLDSLRFESGAPSW-------YHPGRSGIIKTSAEI-VLGYFGE 669 L +LS + V + LR+ PS Y GRSG ++ S +G GE Sbjct: 477 LLSHPQASLSELAGMV-FEVLRYMGFEPSLSALDTSPYISGRSGALQLSGHSQPVGEIGE 535 Query: 670 FHPNILDFFGLSNPICGFEVYLDSI 694 HP L+ +G+ P FE+ L I Sbjct: 536 VHPEWLERWGIRMPTVLFEIELSKI 560 >gi|153011380|ref|YP_001372594.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188] gi|151563268|gb|ABS16765.1| ABC transporter related [Ochrobactrum anthropi ATCC 49188] Length = 522 Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 17/122 (13%) Query: 325 DDNTTDVLVEVALWDPINIA---RSGKNLGIITDSRYRF---ERGVDLQGMIPVLKHIVS 378 D T + +E + D I + R LGII+D R R E DLQ + P + Sbjct: 357 DRLTEGLFLEKPIQDNITLPILDRLRNALGIISDRRARRVAEESVADLQIVAP---DVTI 413 Query: 379 LILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL-RILERL---GFS 434 +LSL GG + I R +T P+ ++ V G+DV +D++ RI++RL G Sbjct: 414 PVLSLSGGNQQRVLIGRWLTINPQLLILHGPTV----GVDVGSKDTIFRIIQRLADDGMG 469 Query: 435 VI 436 VI Sbjct: 470 VI 471 >gi|215445831|ref|ZP_03432583.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] gi|289757754|ref|ZP_06517132.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] gi|289713318|gb|EFD77330.1| phenylalanyl-tRNA synthetase subunit beta [Mycobacterium tuberculosis T85] Length = 97 Score = 37.7 bits (86), Expect = 7.3, Method: Composition-based stats. Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 14/100 (14%) Query: 1 MKFTLSWLKDHLDT-----DVSLEKICDTLTSIGLEVEKVDNREALS-PFTIVKVLSVE- 53 M+ SWL++ + DV+ ++ TL IG EVE+V + P T+ +V +E Sbjct: 1 MRLPYSWLREVVAVGASGWDVTPGELEQTLLRIGHEVEEVIPLGPVDGPVTVGRVADIEE 60 Query: 54 ----RNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGV 89 + P CA+ D G Q +++CGA N VG L V Sbjct: 61 LTGYKKPIRACAV---DIGDRQYREIICGATNFAVGDLVV 97 >gi|27497147|gb|AAO17338.1| phenylalanyl-tRNA synthetase beta chain [Neisseria lactamica] Length = 52 Score = 37.7 bits (86), Expect = 8.0, Method: Composition-based stats. Identities = 17/36 (47%), Positives = 25/36 (69%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD 36 M+F+ SWLK DT++S +K+ LT GLEVE+ + Sbjct: 1 MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAE 36 Searching..................................................done Results from round 2 >gi|254780316|ref|YP_003064729.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] gi|254039993|gb|ACT56789.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] Length = 805 Score = 1036 bits (2680), Expect = 0.0, Method: Composition-based stats. Identities = 805/805 (100%), Positives = 805/805 (100%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC Sbjct: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDC 60 Query: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS Sbjct: 61 AILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCS 120 Query: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA Sbjct: 121 EKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLVA 180 Query: 181 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA 240 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA Sbjct: 181 AGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKA 240 Query: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD Sbjct: 241 VGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSPD 300 Query: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF Sbjct: 301 NVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRF 360 Query: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP Sbjct: 361 ERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVP 420 Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT Sbjct: 421 IEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPLT 480 Query: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD Sbjct: 481 QVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISAD 540 Query: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG 600 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG Sbjct: 541 MSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEG 600 Query: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA Sbjct: 601 SGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSA 660 Query: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL Sbjct: 661 EIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRDL 720 Query: 721 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD Sbjct: 721 AFIVDQHIPAGTLVNIIKNVDRLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTFRD 780 Query: 781 DDIRILMDRIVENVVKKTNAVLRSS 805 DDIRILMDRIVENVVKKTNAVLRSS Sbjct: 781 DDIRILMDRIVENVVKKTNAVLRSS 805 >gi|15887609|ref|NP_353290.1| phenylalanyl-tRNA synthetase subunit beta [Agrobacterium tumefaciens str. C58] gi|30316251|sp|Q8UIN4|SYFB_AGRT5 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15155152|gb|AAK86075.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium tumefaciens str. C58] Length = 807 Score = 944 bits (2439), Expect = 0.0, Method: Composition-based stats. Identities = 430/807 (53%), Positives = 578/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC+ LT+IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKEHLETDATLDEICERLTAIGLEVEDVDDKAAYKPFVIAKVVSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +Q+VCGAPN R GL+G A PG +P ++ + V KIRG+ES GMMC Sbjct: 61 LKVLMVDAGDGKPVQIVCGAPNARAGLVGALARPGVYVPGIDVTLAVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNISDDHDGIIDLPEDAPVGTSFATYAGLDDPVIEINLTPNRPDCTSIYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLGKLK + P+++K +LDD++LC GF++ V+GV+N +P WM+QRL Sbjct: 181 ASGLGKLKTKAAPSFKVEGATPVDVKLELDDAALCPGFSLRIVRGVKNGPSPKWMQQRLM 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE ILALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGDLTVRRAKDGETILALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA + ++SI G++GG+H+GCD+NT DVL+E ALWDPINIA++G++LGIITD+RYR Sbjct: 301 NNVVIADEKGLESIGGVMGGEHSGCDENTIDVLIESALWDPINIAKTGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A + I ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGIAGEAKIVGYKGHQPKVVDFPLSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+SL IL+ LGF V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK EPL Sbjct: 421 SSEESLAILKGLGFGVEGTGERVSVTVPSWRPDVDGKADLVEEVMRIHGVDNIKPEPLEN 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR +R LASR M+E V WSFI + Q+ LF GG L++ NPI+A Sbjct: 481 FGAVNGRILTTLQIRTRTARRALASRGMLEAVTWSFIPEAQAKLFSGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A GIR+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADKGHGDVAIFEVSGTYEGDTPEKQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 GSGR+WS+ ++ + VD++DAKADALSV+E + + +++ E+GAP+WYHPGRSG IK Sbjct: 601 GSGRMWSNAAKGGGKPVDVYDAKADALSVLEACGLPMANVQIEAGAPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S CGFE+YLD++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLSELDVSGTYCGFEIYLDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG ++ + D +LI V VFD+F+G SLGE +KSVAI+V IQP+ T Sbjct: 721 DFAFVVDKSVEAGAIIKAATSADRKLITGVNVFDIFEGASLGENRKSVAIEVQIQPVDKT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR+ Sbjct: 781 LTDEDFEALTAKIVGNVEKSTGGVLRA 807 >gi|325291695|ref|YP_004277559.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] gi|325059548|gb|ADY63239.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium sp. H13-3] Length = 807 Score = 942 bits (2436), Expect = 0.0, Method: Composition-based stats. Identities = 426/807 (52%), Positives = 576/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC+ LT+IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKEHLETDATLDEICERLTAIGLEVEDVDDKAAYKPFVIAKVVSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +Q+VCGAPN R GL+G A PG +P ++ + V KIRG+ES GMMC Sbjct: 61 LKVLMVDAGDGKPVQIVCGAPNARAGLVGALARPGVYVPGIDVTLAVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNISDDHDGIIDLPEDAPVGTSFATYAGLDDPVIEINLTPNRPDCTSIYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLGKLK S P+++K +LDD++LC GF++ V+GV+N +P WM+QRL Sbjct: 181 ASGLGKLKTKPAPSFKVEGSTPVDVKLELDDAALCPGFSLRIVRGVKNGPSPKWMQQRLM 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE ILALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGDLTVRRAKEGETILALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA + ++SI G++GG+H+GCD+NT DVL+E ALWDPINIA++G++LGIITD+RYR Sbjct: 301 NNVVIADEKGLESIGGVMGGEHSGCDENTVDVLIESALWDPINIAKTGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A + + ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGVAGEAKVVGYKGHQPKVVDFPLSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+SL IL+ LGF + G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK EPL Sbjct: 421 SAEESLAILKGLGFGIEGTGERVSVTVPSWRPDVDGKADLVEEVMRIHGVDNIKPEPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR +R LASR M+E V WSFI + + LFGGG L++ NPI+A Sbjct: 481 FGAVNGRILTTLQVRTRTARRALASRGMLEAVTWSFIPEAHAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADKGHGDVAIFEVSGTYEGDTPDTQRRVAGGVRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 GSGR+WS+ ++ + VD++DAKADALSV+E + + +++ E+GAP WYHPGRSG IK Sbjct: 601 GSGRMWSNATKGGGKPVDVYDAKADALSVLEACGLPMANVQIEAGAPGWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S GFE+YLD++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLSELDVSGVYSGFEIYLDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG ++ + D +LI V VFDVF+G SLGE +KS+AI+V IQP+ T Sbjct: 721 DFAFVVDKSVEAGAIIKAATSADRKLITGVNVFDVFEGASLGESRKSIAIEVQIQPVDRT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR+ Sbjct: 781 LTDEDFEALTAKIVGNVEKSTGGVLRA 807 >gi|307301185|ref|ZP_07580947.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] gi|307321086|ref|ZP_07600491.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306893258|gb|EFN24039.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti AK83] gi|306903641|gb|EFN34228.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium meliloti BL225C] Length = 808 Score = 942 bits (2435), Expect = 0.0, Method: Composition-based stats. Identities = 434/808 (53%), Positives = 579/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAP+G +DY L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLPEDAPLGTSYADYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK P++++ DL +D LC GFA+ V+GV+N +P WMRQRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKVRLDLGEDRHLCPGFALRLVRGVKNGPSPAWMRQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYTLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+NTTDVL+E ALWDP+NIA++G+ LGIITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDENTTDVLIESALWDPMNIAKTGRTLGIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M P L+ L+L LCGGTA+ + + ++PR + F SEV+RL+G++ Sbjct: 361 RFERGVDPEYMAPGLERATELVLELCGGTAAKMDVVGYDGHEPRSVDFPVSEVRRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V+VPSWR D++ KADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVTVPSWRPDIDGKADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR +R LA+R M+E V WSFI + + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGKILTTLQIRTRQARRALATRGMLEAVTWSFIPEGHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGYGDVAIFEVSGTYEGDTPEAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRSG IK Sbjct: 601 NGTGRLWSNAVKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSGTIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFE+Y+D++P +KK T+TK + LS VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDALDVSGPLAGFEIYIDAMPEPKKKATRTKPALELSPFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V D +LI V VFDVF+G SLGEG+KSVAI+V IQP++ Sbjct: 721 RDFAFVVDKGVEAAAIVRAASGADRKLITAVNVFDVFEGASLGEGRKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|15964039|ref|NP_384392.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium meliloti 1021] gi|30316267|sp|Q92SS9|SYFB_RHIME RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|15073215|emb|CAC41723.1| Probable phenylalanyl-tRNA synthetase beta chain [Sinorhizobium meliloti 1021] Length = 808 Score = 941 bits (2433), Expect = 0.0, Method: Composition-based stats. Identities = 433/808 (53%), Positives = 579/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAP+G +DY L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLPEDAPLGTSYADYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK P++++ DL +D LC GFA+ V+GV+N +P WMRQRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKVRLDLGEDRHLCPGFALRLVRGVKNGPSPAWMRQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYTLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+NTTDVL+E ALWDP+NIA++G+ LGIITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDENTTDVLIESALWDPMNIAKTGRTLGIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M P L+ L+L LCGGTA+ + + ++PR + F SEV+RL+G++ Sbjct: 361 RFERGVDPEYMAPGLERATELVLELCGGTAAKMDVVGYDGHEPRSVDFPVSEVRRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V+VPSWR D++ +ADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVTVPSWRPDIDGRADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR +R LA+R M+E V WSFI + + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGKILTTLQIRTRQARRALATRGMLEAVTWSFIPEGHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTPE Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGYGDVAIFEVSGTYEGDTPEAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRSG IK Sbjct: 601 NGTGRLWSNAVKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSGTIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFE+Y+D++P +KK T+TK + LS VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDALDVSGPLAGFEIYIDAMPEPKKKATRTKPALELSPFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V D +LI V VFDVF+G SLGEG+KSVAI+V IQP++ Sbjct: 721 RDFAFVVDKGVEAAAIVRAASGADRKLITAVNVFDVFEGASLGEGRKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|222084533|ref|YP_002543062.1| phenylalanyl-tRNA synthetase [Agrobacterium radiobacter K84] gi|221721981|gb|ACM25137.1| phenylalanyl-tRNA synthetase [Agrobacterium radiobacter K84] Length = 807 Score = 938 bits (2425), Expect = 0.0, Method: Composition-based stats. Identities = 433/807 (53%), Positives = 573/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE VD++ A PF I KVLS E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICARLTMIGLEVEDVDDKAAFKPFVIAKVLSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + IQVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGAGKPIQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y + DP+I+++LTPNR DC GV GIA DL Sbjct: 121 SEKELEISDSHDGIIDLPEDAPVGTSFAAYTGIDDPMIEINLTPNRPDCTGVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK + P ++K +LDD+ LC GFA+ V+GV+N +P WM+QRL+ Sbjct: 181 ASGLGTLKPRAVPSFAIEGETPTDVKIELDDARLCPGFALRLVRGVKNGPSPKWMQQRLQ 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVDITNY++ D+G P HVFDA+++ L VRRA GE +LALD +EY L P Sbjct: 241 AIGLRPISALVDITNYMTFDQGRPMHVFDAAKVKGNLVVRRAKDGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVIA D I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG+ LGIITD+RYR Sbjct: 301 NNVVIADDNGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRGLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L+ CGGTA+ + Y + + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLACCGGTAAKAKVEGYKGYDAKIVDFPFSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+ IL +LGF V G ++ V+VP WR DV+ KADLVEEI+RI+GVD IK +PL Sbjct: 421 STEEGKSILTKLGFLVSGSGERVSVAVPPWRSDVDGKADLVEEIMRIHGVDNIKPQPLAS 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 V + + L++ Q RTR KR LASR M+E V WSFIS++Q+ LFGGG L++ NPI+A Sbjct: 481 HNVVNGKILTVLQIRTRTAKRALASRGMLEAVTWSFISEDQAKLFGGGSNALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN D+ D AIFEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 DMSDMRPSLLPGLLSAAQRNADKGYGDVAIFEVSGTYENDRPEGQRRVAGGIRRGTATLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ ++ + VD+FDAKADAL+V+E + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRMWSNAAKGGGKPVDVFDAKADALAVLEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ ++ + GFEVY+D++P +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPKTLEALDVAGALAGFEVYIDAMPEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AGT++ D +LI V VFD+F+G SLGE KKS+AI+V IQP + T Sbjct: 721 DFAFVVDKSVEAGTIIRAATGADRKLITGVNVFDIFEGASLGEDKKSIAIEVQIQPAERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T VLR Sbjct: 781 LTDEDFEALTQKIVANVTKTTGGVLRG 807 >gi|150398673|ref|YP_001329140.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium medicae WSM419] gi|150030188|gb|ABR62305.1| phenylalanyl-tRNA synthetase, beta subunit [Sinorhizobium medicae WSM419] Length = 808 Score = 935 bits (2416), Expect = 0.0, Method: Composition-based stats. Identities = 433/808 (53%), Positives = 578/808 (71%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ SLE+IC LT IGLEVE VD++ A PF I KV+S E++P+ D Sbjct: 1 MKFTLSWLKDHLETEASLEEICARLTMIGLEVEDVDDKAAFKPFVIAKVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P + ++V IRG+ES GMMC Sbjct: 61 LRVLMVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIGVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++LP DAPVG +D+ L DP+I ++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHNGIIDLPEDAPVGASYADFAGLDDPVIAINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK + P++++ DL +D LC GFA+ V+GV+N +P WMR+RL Sbjct: 181 ASGLGTLKTRPMPSFAVEGETPVKVRLDLGEDGHLCPGFALRLVRGVKNGPSPAWMRRRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GEK+LALD +EY LS Sbjct: 241 MAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVAGNLTVRRAREGEKVLALDTREYMLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI GI+GG+H+GCD+ TTDVL+E ALWDP+NIAR+G+ L IITD+RY Sbjct: 301 PANVVIADEEGVESIGGIMGGEHSGCDETTTDVLIESALWDPMNIARTGRTLSIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P L+ L+L LCGGTA+ + + + P++ F SEVKRL+G++ Sbjct: 361 RFERGVDPEYMVPGLERATELVLELCGGTAARMDVVGYDGHTPKRADFPVSEVKRLTGLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ IL +LGF V G ++ V VPSWR D++ KADLVEE++RI+GVD I + PL Sbjct: 421 VSSEESVSILRKLGFGVEGSGERLTVKVPSWRPDIDGKADLVEEVMRIHGVDNIVAAPLA 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L++ Q RTR +R LASR M+E V WSFI +E + LFGGGQ EL++ NPI+ Sbjct: 481 SHNAVNGRILTVLQIRTRQARRALASRGMLEAVTWSFIPQEHAKLFGGGQPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADKGHGDVAIFEVSGTYEGDTPGAQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ + + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRS IK Sbjct: 601 NGAGRLWSNSMKGGGKPVDVFDAKADAIAVLEACGVPMANVQFEAGGPAWYHPGRSATIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S P+ GFEVY+D++P ++K T+TK+ + LS+ VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDVLDVSGPLSGFEVYIDAMPEPKRKATRTKQALELSAFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A +V D +L+ V VFDVF+G SLGEGKKSVAI+V IQP++ Sbjct: 721 RDFAFVVDRDVEAAAIVRAATGADRKLVTSVNVFDVFEGASLGEGKKSVAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|163757706|ref|ZP_02164795.1| phenylalanyl-tRNA synthetase beta subunit [Hoeflea phototrophica DFL-43] gi|162285208|gb|EDQ35490.1| phenylalanyl-tRNA synthetase beta subunit [Hoeflea phototrophica DFL-43] Length = 803 Score = 932 bits (2408), Expect = 0.0, Method: Composition-based stats. Identities = 422/807 (52%), Positives = 569/807 (70%), Gaps = 7/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++IC+ LT+IGLEVE VD+++A PF I KVLS E++P+ D Sbjct: 1 MKFTLSWLKDHLETDATLDQICERLTAIGLEVEDVDDKKAYQPFVIAKVLSAEKHPEADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G +Q+VCGAPN R GL+G A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LKVLSVDAGDGNPVQIVCGAPNARAGLVGALARPGTYVPGIDVTLSVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SERELDMSDEHDGIIDLPDDAPVGTPFAAYAGLDDPVIEINLTPNRPDCTSIFGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK +K LDD SLC GFA V+GV+N +P WM++RL Sbjct: 181 ASGLGTLKAPKAPEFAVEGETTQNVKLILDDESLCPGFAWRLVRGVKNGPSPKWMQKRLL 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVD+TNY++ D+G P HVFDA ++ L VRRA GE+ILALD + Y L+P Sbjct: 241 AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGDLVVRRAQEGEEILALDTRTYKLNP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 NVVIA D +SI GI+GG+H+GCD+NTT+VL+E ALWDPINIA++G++ IITD+RYR Sbjct: 301 SNVVIADDNGPESIGGIMGGEHSGCDENTTNVLIESALWDPINIAKTGRSHSIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L +CGG A+ + ++ + + F SEV+RL+G+ V Sbjct: 361 FERGVDPEYMVPGLERTTELVLEMCGGKAAAARVEGYKGHQKKIVDFPFSEVRRLTGLSV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E++ IL LGF V G + +V+VPSWR DV+ KADLVEE++R++GVD IK EPLP Sbjct: 421 SNEEARAILNGLGFEVSGSGETVQVAVPSWRPDVDGKADLVEEVMRVHGVDNIKPEPLPT 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 +++ L+ Q RTR KR LASR M+E V WSFIS+EQ+ LFGGG R L++ NPI+A Sbjct: 481 MGAVNEKILTTLQIRTRLAKRALASRGMLEAVTWSFISEEQAKLFGGGDRSLKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGL+ A GRN R D A+FEVS YENDTP+GQ+ +A G+R+G++G+ Sbjct: 541 DMSDMRPSLLPGLISAAGRNGARGYGDVALFEVSGTYENDTPKGQRRVAGGVRRGTAGLN 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGIIKT 658 G GR W + V +FDAKADA++V+E + +D L FE GA WYHPGRSG+IK Sbjct: 601 GGGRHWDGA----AKPVGVFDAKADAIAVLEACGAPVDRLSFERGAADWYHPGRSGLIKL 656 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + VLG+FGEFHPN LD +S P+CGFEV++D+IP ++K T+TK V+ LS+ V+R Sbjct: 657 GPKTVLGHFGEFHPNTLDALDVSGPLCGFEVFIDAIPEPKRKVTRTKPVLELSAFQAVRR 716 Query: 719 DLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + + TLV + D+ L+ VTVFD+F+G SLGEGKKSVAI++ IQP + T Sbjct: 717 DFAFVVDADVASATLVRAAQGADKQLVTGVTVFDLFEGPSLGEGKKSVAIEITIQPRERT 776 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ + ++ NV K + VLR Sbjct: 777 LTDEDLDKIAKSVIANVEKSSGGVLRG 803 >gi|209551839|ref|YP_002283756.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537595|gb|ACI57530.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 810 Score = 931 bits (2407), Expect = 0.0, Method: Composition-based stats. Identities = 427/810 (52%), Positives = 571/810 (70%), Gaps = 6/810 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTQIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGAGAPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPEDAPVGKSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKLTLDLDDQKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA+++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVKGNLTVRRAVEGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD M+P L+ L+L LCGGTA+ + Y+P+ + F SEVKRL+G+D+ Sbjct: 361 FERGVDPDYMVPGLERTTELVLELCGGTAAKAEVVGYKGYQPKVVEFPFSEVKRLTGLDI 420 Query: 420 PIEDSLRILERLGFSVI---GEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 P+E+ +IL RLGF V G+ V+VPSWR DV+ KADLVEE++RI+GVD IK P Sbjct: 421 PVEEMKQILSRLGFVVTMGNGDVGSCSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAP 480 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 L + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NP Sbjct: 481 LESHAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANP 540 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I+A+MS+MR SLLPGLL A RN D+ D A+FEVS YEND P+GQ+ +A GIR+G++ Sbjct: 541 IAAEMSDMRPSLLPGLLTAAQRNADKGYGDVALFEVSGTYENDRPDGQRRVAGGIRRGTA 600 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGI 655 + G+GR+WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG Sbjct: 601 SLAGAGRMWSNAAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGT 660 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 IK ++VLGYFGEFHP L+ +S +CGFEVY+D++P +KK T+TK + LS Sbjct: 661 IKMGPKVVLGYFGEFHPLTLEALDVSGALCGFEVYIDAMPEPKKKATRTKPALDLSPFQA 720 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 VKRD AF+VD+ + AG ++ + D +L+ V VFD+F+G S+GEGKKSVAI+V IQP Sbjct: 721 VKRDFAFVVDKTVEAGAIIKAATSADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPA 780 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D+D L +IV +V K T VLRS Sbjct: 781 ERTLTDEDFEALTQKIVASVTKFTGGVLRS 810 >gi|222147174|ref|YP_002548131.1| phenylalanyl-tRNA synthetase subunit beta [Agrobacterium vitis S4] gi|221734164|gb|ACM35127.1| phenylalanyl-tRNA synthetase beta chain [Agrobacterium vitis S4] Length = 807 Score = 931 bits (2406), Expect = 0.0, Method: Composition-based stats. Identities = 426/807 (52%), Positives = 574/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHLDTD +L+++C+ LT+IGLEVE VD++ A PF I K+L+ E++P D Sbjct: 1 MKFTLSWLKDHLDTDATLDQVCERLTAIGLEVEDVDDKAAYKPFVIAKILAAEKHPSADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +QVVCGAPN R GL+G + PG +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLSVDAGDGKPVQVVCGAPNARAGLIGAFGRPGMYVPGLDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD+ I++LP DAPVG + Y + DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELNMSDNHDGIIDLPEDAPVGTSFAAYAGIDDPMIEINLTPNRPDCTSIFGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK+ +E+K +LDD+ LC GFA V GV+N +P WM++RL Sbjct: 181 ASGLGTLKQPKAPSFAVEGETSVEVKLELDDAKLCPGFAYRLVHGVKNGPSPVWMQKRLI 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR ISALVD+TNY++ D+G P HVFDA ++ VLTVRRA GE+ILALD + Y L+P Sbjct: 241 AIGLRPISALVDVTNYMTFDQGRPMHVFDADKVKGVLTVRRAKDGEEILALDTRTYKLTP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 + VVIA D ++SI GI+GG+H+GCD+NT++VL+E ALWDPINIA+SG++LGIITD+RYR Sbjct: 301 NTVVIADDNGLESIGGIMGGEHSGCDENTSNVLIESALWDPINIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L +CGG A+ + + + + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLEMCGGKAASAKVVGYQGHTKKVVDFPFSEVKRLTGLNV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 ++S IL LGF V GE + +V+VPSWR DV+ KADLVEE++R++GVD+I EPLP Sbjct: 421 STDESRTILTGLGFEVSGEGETVKVAVPSWRPDVDGKADLVEEVMRMHGVDKITPEPLPS 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LASR MME V WSFIS EQ+ LFGGG+ EL+++NPI+A Sbjct: 481 MGAVNTKILTTLQIRTRTAKRALASRGMMEAVTWSFISAEQAALFGGGKPELKLVNPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS+MR SLLPGLL A RN DR D AIFEVS YE DTPEGQ+ +A G+R+G++ + Sbjct: 541 DMSDMRPSLLPGLLTAAQRNADRGFGDVAIFEVSGTYEGDTPEGQRRVAGGVRRGTASLS 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ ++ + VD++DAKADAL+V+E + + +++ E G P WYHPGRSG IK Sbjct: 601 GAGRMWSNATKGGGKPVDVYDAKADALAVLEACGLPMGNVQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L +S +CGFE+YLD++ +KK T+TK + LS L VKR Sbjct: 661 GPKVVLGYFGEFHPKTLAALDVSGTLCGFEIYLDAMQEPKKKATRTKPALDLSPLQMVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+V++ + AG ++ + D +LI V VFDVF+G S+GEGKKSVAI+VLIQP T Sbjct: 721 DFAFVVERSVEAGAIIKAATSADRKLITGVNVFDVFEGASVGEGKKSVAIEVLIQPSDKT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV NV K T LR+ Sbjct: 781 LTDEDFDALTKKIVGNVEKTTGGALRA 807 >gi|190889930|ref|YP_001976472.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium etli CIAT 652] gi|190695209|gb|ACE89294.1| phenylalanyl-tRNA synthetase protein, beta subunit [Rhizobium etli CIAT 652] Length = 807 Score = 930 bits (2404), Expect = 0.0, Method: Composition-based stats. Identities = 425/807 (52%), Positives = 571/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE+VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICTRLTEIGLEVEEVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKE+ +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKEMQISDNHDGIIDLPDDAPVGQSYASYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GF++ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRAAPSFAVEGETPVKLTLDLDDPKLCPGFSLRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVTGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGGT + + Y+P+ + F SEV+RL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLDLCGGTPARAEVVGYKGYEPKVVDFPYSEVRRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 STEESNAILARLGFTVSGTGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L + NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALRLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG IK Sbjct: 601 GGGRMWSNAVKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G ++ D +L+ V VFD+F+G S+GEGKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVESGAIIKAATGADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|241207217|ref|YP_002978313.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861107|gb|ACS58774.1| phenylalanyl-tRNA synthetase, beta subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 807 Score = 928 bits (2399), Expect = 0.0, Method: Composition-based stats. Identities = 429/807 (53%), Positives = 572/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTEIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPDDAPVGQSYAAYAHLDDPLIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRPAPSFAVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I+ LTVRRA GE +LALD +EY LSP Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKINGNLTVRRAAEGETVLALDQREYKLSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDENGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD M P L+ L+L LCGG A+ I Y+P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPDYMAPGLERTTELVLELCGGKAARAEIVGYQGYEPKIVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFTVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPTLKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D A+FEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLSAAQRNADKGYGDVALFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRAWSNTAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVY+D++P +++K T+TK + LS V+R Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYVDAMPEAKRKATRTKSALELSPFQVVRR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG +V D +L+ V VFD+F+G SLG+GKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVEAGAIVKAATGADRKLVTGVNVFDIFEGASLGDGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|116250038|ref|YP_765876.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium leguminosarum bv. viciae 3841] gi|115254686|emb|CAK05760.1| putative phenylalanyl-tRNA synthetase beta chain [Rhizobium leguminosarum bv. viciae 3841] Length = 807 Score = 928 bits (2398), Expect = 0.0, Method: Composition-based stats. Identities = 427/807 (52%), Positives = 573/807 (71%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD L++IC LT IGLEVE VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDAGLDEICTRLTEIGLEVEDVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDSHDGIIDLPEDAPVGQSYAAYAHLDDPLIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKMRPAPSFAVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLI 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I+ L VRRA GE +LALD +EY LSP Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKINGNLAVRRAAEGETVLALDQREYKLSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDENGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A+ I Y+P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGKAAKAEIVGYQGYEPKIVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF+V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFTVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + + L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGKILTTLQIRTRLAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D A+FEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLSAAQRNADKGYGDVALFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR WS+ ++ + VD+FDAKADAL+VIE + + +++ E G P+WYHPGRSG IK Sbjct: 601 GAGRAWSNAAKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPAWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVY+D++P +++K T+TK + LS V+R Sbjct: 661 GPKVVLGYFGEFHPLTLESLDVSGALCGFEVYVDAMPEAKRKATRTKPALELSPFQLVRR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AG +V D +L+ V VFD+F+G S+G+GKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVEAGAIVKAATGADRKLVTAVNVFDIFEGASVGDGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|227824129|ref|YP_002828102.1| phenylalanyl-tRNA synthetase subunit beta [Sinorhizobium fredii NGR234] gi|227343131|gb|ACP27349.1| phenylalanyl-tRNA synthetase beta chain PheT [Sinorhizobium fredii NGR234] Length = 808 Score = 927 bits (2397), Expect = 0.0, Method: Composition-based stats. Identities = 437/808 (54%), Positives = 584/808 (72%), Gaps = 4/808 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHLDT+ SLE+IC LT IGLEVE VD++ A PF I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLEEICARLTMIGLEVEDVDDKAAFKPFVIARVISAEQHPNADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L++DTG + +QVVCGAPN R GL+G +A PG+ +P ++ ++V IRG+ES GMMC Sbjct: 61 LKVLKVDTGSGEPVQVVCGAPNARKGLVGAFAAPGTYVPGIDVTLSVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SDD I++L DAP+G + Y L DP+I+++LTPNR DC V GIA DL Sbjct: 121 SEKELEISDDHTGIIDLAEDAPLGASYAAYAGLDDPVIEINLTPNRPDCTSVHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG LK P++++ DL DD LC GFA+ V+GVRN +P WMRQRL Sbjct: 181 ASGLGTLKTKPAPSFSVEGETPVKVRLDLGDDRHLCPGFALRLVRGVRNGPSPAWMRQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY++ D+G P HVFDA+++S LTVRRA GEK+LALD +EY LS Sbjct: 241 TAIGLRPINALVDITNYLTFDQGRPLHVFDAAKVSGNLTVRRAKEGEKVLALDTREYTLS 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P NVVIA + ++SI G++GG+H+GCD+ TTDVL+E ALWDP+NIA++G++LGIITD+RY Sbjct: 301 PANVVIADEDGVESIGGVMGGEHSGCDEATTDVLIESALWDPMNIAKTGRSLGIITDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P L+ L+L LCGGTA+ + + + P+ + F SEVKRL+G+D Sbjct: 361 RFERGVDPEYMVPGLERATELVLQLCGGTAAKLDVVGYEGHTPKIVDFPVSEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V E+S+ ILE+LGF V G ++F V+VPSWR DV+ KADLVEE++RI+GVD I + LP Sbjct: 421 VSSEESVSILEKLGFGVAGSGERFRVTVPSWRPDVDGKADLVEEVMRIHGVDNIVAAALP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + + L+ Q RTR +R LASR M+E V WSFIS++Q+ LFGGGQ L++ NPI+ Sbjct: 481 SHKAVNGKILTTLQIRTRQARRALASRGMLEAVTWSFISEDQARLFGGGQPALKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN D+ D AIFEVS YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYEGDTPDTQRRVAGGVRRGTASL 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 G+GRLWS+ ++ + VD+FDAKADA++V+E V + +++FE+G P+WYHPGRSG IK Sbjct: 601 TGAGRLWSNAAKGGGKPVDVFDAKADAIAVLEACSVPMGNVQFEAGGPAWYHPGRSGTIK 660 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 +IVLG FGEFHP LD +S PI GFE+Y+D++P +KK T+TK + LS VK Sbjct: 661 LGPKIVLGAFGEFHPKTLDALDVSGPIAGFEIYVDAMPEPKKKTTRTKPALELSPFQAVK 720 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + A + D +L+ V VFDVF+G SLGEGKKS+AI+V IQP++ Sbjct: 721 RDFAFVVDKTVEAAAIARAASGADRKLVTGVNVFDVFEGSSLGEGKKSIAIEVTIQPVER 780 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIV NV K T VLR+ Sbjct: 781 TLTDEDFEALTARIVANVAKSTGGVLRA 808 >gi|327191956|gb|EGE58937.1| phenylalanyl-tRNA synthetase protein, beta subunit [Rhizobium etli CNPAF512] Length = 807 Score = 927 bits (2396), Expect = 0.0, Method: Composition-based stats. Identities = 426/807 (52%), Positives = 570/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE+VD++ A PF I +V+S E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICTRLTEIGLEVEEVDDKAAFKPFVIARVVSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P ++ + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKE+ +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKEMRISDNHDGIIDLPDDAPVGQSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK P+++ DLDD LC GFA+ V+GVRN +P WM+QRL Sbjct: 181 ASGLGTLKTRAAPSFSVEGETPVKLTLDLDDPKLCPGFALRLVRGVRNGPSPRWMQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVDITNY++ D+G P HVFDA++++ LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDITNYMTFDQGRPMHVFDAAKVTGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCD+NT DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEDGIESIGGIMGGEHSGCDENTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGG A+ + ++P+ + F SEVKRL+G++V Sbjct: 361 FERGVDPEYMVPGLERTTELVLDLCGGMAARAEVVGYKGHEPKVVDFPYSEVKRLTGLEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGF V G ++ V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 STEESNAILARLGFMVSGSGERVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LASR M+E V WSFI ++Q+ LFGGG L + NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALASRGMLEAVTWSFIPEDQAKLFGGGSPALRLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ D AIFEVS YEND P+GQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYGDVAIFEVSGTYENDRPDGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P WYHPGRSG IK Sbjct: 601 GGGRMWSNAVKGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWYHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKVVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALELSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G ++ D +L+ V VFD+F+G S+GEGKKSVAI+V IQP++ T Sbjct: 721 DFAFVVDKTVESGAIIKAATGADRKLVTGVNVFDIFEGASVGEGKKSVAIEVQIQPVERT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVAKFTGGVLRS 807 >gi|315122260|ref|YP_004062749.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495662|gb|ADR52261.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 807 Score = 925 bits (2392), Expect = 0.0, Method: Composition-based stats. Identities = 587/807 (72%), Positives = 693/807 (85%), Gaps = 2/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDL-D 59 MKFTLSWLKDHLDTD SL +ICD LTSIGLEVE VD R++L+PF IV++LSV+R+ + + Sbjct: 1 MKFTLSWLKDHLDTDASLGEICDNLTSIGLEVEGVDTRDSLAPFRIVEILSVQRHSNSQN 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 ++L+ID G+ + +QVVCGAPNVRVGLLG+WAPPGSCIPEN+M +NVRKIRGIES GMMC Sbjct: 61 LSVLQIDVGEQKTVQVVCGAPNVRVGLLGIWAPPGSCIPENHMTINVRKIRGIESMGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKELMLSD I+ELPIDAPVGGR SDY LSDPIID++LTPNRSDC GVRGIALDLV Sbjct: 121 SEKELMLSDSCVGIIELPIDAPVGGRFSDYFGLSDPIIDIALTPNRSDCSGVRGIALDLV 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AAGLGKLKEI+ SS SIP+EI+FDLDD+ LCKGFAMCCV+GVRN +P WMRQRL+ Sbjct: 181 AAGLGKLKEIDAPVFSSSGSIPVEIQFDLDDARLCKGFAMCCVRGVRNTSSPKWMRQRLE 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 AVGLR ISALVDITNY+++DRGYPSHVFD+S+IS +T+RRA SGEK +AL+++EY+LSP Sbjct: 241 AVGLRPISALVDITNYIAIDRGYPSHVFDSSKISGDITIRRARSGEKFIALNDKEYELSP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 DNVV+ASD I+SIAGIIGGK+A CDD+TTDVLVEVALWD +NIA SG LGI TDSRYR Sbjct: 301 DNVVVASDNCIESIAGIIGGKNACCDDDTTDVLVEVALWDSLNIAHSGHVLGISTDSRYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVDLQGM+P+LK+ VSLILSLCGG ASDI + ++ YKPR I F+NSEVKRL+GI+V Sbjct: 361 FERGVDLQGMLPILKYEVSLILSLCGGMASDIFVGKHEIYKPRTIEFINSEVKRLAGIEV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 P+++SL IL LGF VI + + VSVPSWRQDVEEKADLVEEILRIYGVD+IK EPL L Sbjct: 421 PLKESLCILRNLGFDVIEKKGVWTVSVPSWRQDVEEKADLVEEILRIYGVDKIKGEPLSL 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 T + KRNLSLQQSR RY KRVLASR+MME++ WSFI K+QSVLFGGGQ ELE+LNPIS Sbjct: 481 THLGKKRNLSLQQSRIRYSKRVLASRSMMELITWSFIPKKQSVLFGGGQPELELLNPISV 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MSNMRTSLLPGLLKA R++DRAI D AIFEVSHVYEND PEGQK MA+GIRKGSS +E Sbjct: 541 EMSNMRTSLLPGLLKAVSRSIDRAIMDLAIFEVSHVYENDRPEGQKCMASGIRKGSSCME 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTS 659 GSGR WS++S ++CRFVD+FDAKADAL+VIE FVS+DSL+ ESGAPSWYHP RSG IK + Sbjct: 601 GSGRFWSEQSVKKCRFVDVFDAKADALAVIEAFVSIDSLQIESGAPSWYHPKRSGTIKVN 660 Query: 660 AEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKRD 719 +VLGYFGEFHP ILDFFGLSNPIC FEVYLD IPI + K +KK+++L S HP++RD Sbjct: 661 NNVVLGYFGEFHPEILDFFGLSNPICCFEVYLDYIPIPKNKPIASKKIINLPSFHPIRRD 720 Query: 720 LAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDTF 778 AFI+D+ +P TL+NI++ +DR LI DV VFDVF+GKSLGE KKS+A++VLIQPLK+ F Sbjct: 721 FAFIIDKTVPTATLINIVRRIDRQLIVDVRVFDVFEGKSLGEDKKSIALEVLIQPLKEAF 780 Query: 779 RDDDIRILMDRIVENVVKKTNAVLRSS 805 D+D+R L +RI+ENV KK+NAVLRSS Sbjct: 781 CDEDVRALTERIIENVTKKSNAVLRSS 807 >gi|110633034|ref|YP_673242.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium sp. BNC1] gi|110284018|gb|ABG62077.1| phenylalanyl-tRNA synthetase beta subunit [Chelativorans sp. BNC1] Length = 801 Score = 918 bits (2373), Expect = 0.0, Method: Composition-based stats. Identities = 419/807 (51%), Positives = 567/807 (70%), Gaps = 9/807 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T+ +L++I TLT IGLEVE VD++ AL PF I KVL+ +++PD D Sbjct: 1 MKFTLSWLKDHLETEATLDEIVATLTMIGLEVESVDDKAALKPFVIAKVLTAQQHPDADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + IQVVCGAPN R GL+G +A PG+ +P ++ ++V KIRG+ES GMMC Sbjct: 61 LKVLTVDTGDGKPIQVVCGAPNARAGLVGAFAAPGTYVPGIDVTLSVGKIRGVESHGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + + L DP+I++ LTPNR DC V GIA DL Sbjct: 121 SERELKLSDEHDGIIDLPNDAPVGESFAKWARLDDPVIEIGLTPNRPDCTSVYGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 AAGLGKLK + + P+++K + LC GFA+ V+GV+N +P W++QRL Sbjct: 181 AAGLGKLKSGTVEPVAGKGACPVDVK--ILAPELCPGFALRLVRGVKNGPSPKWLQQRLI 238 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ LVDITNY++ DRG P HVFDA ++ L +RRA +GEK+LALD +EY+L+P Sbjct: 239 AIGLRPINTLVDITNYITFDRGRPLHVFDAVKVKGNLVIRRAEAGEKVLALDGREYELNP 298 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 + VIA D ++SIAG++GG+H+GCD+NTTDVL+E ALW+ +NIAR+G++LGIITD+RYR Sbjct: 299 EVCVIADDNGVESIAGVMGGEHSGCDENTTDVLIESALWNALNIARTGRDLGIITDARYR 358 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ +++ LCGG AS+ + + + + F SEVKRL+G+DV Sbjct: 359 FERGVDPEFMVPGLELATRMVIDLCGGEASEARVVGYRGHTAKIVTFPTSEVKRLTGLDV 418 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 P ++SL IL RLGF G D EVSVPSWR D++ KADLVEE++RI+GV++I+ +P+ Sbjct: 419 PADESLSILSRLGFKPEGSGDVVEVSVPSWRPDIDGKADLVEEVMRIHGVNRIEPQPMIA 478 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 R L+ Q RTR KR LA R MME V WSFI +E + LF ++ +++ NPI+A Sbjct: 479 KDAVGGRVLTAAQIRTRQAKRALAVRGMMEAVTWSFIPEEHARLFAENRKLIKLANPIAA 538 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 DMS MR SL+PGL+ A RN DR AD A+FEVS YE D PE Q+ AAG+R+G++ ++ Sbjct: 539 DMSTMRPSLMPGLIAAAQRNADRGFADVALFEVSAAYEGDQPEEQRRAAAGLRRGTARLD 598 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGIIKT 658 GR WS VD+F AKADA +V+E + +D L+ E+G P WYHPGRSG IK Sbjct: 599 AQGRHWSGN----TAPVDVFAAKADAFAVLEACGAPVDKLQVEAGGPHWYHPGRSGTIKL 654 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 + +LG FGEFHP L+ +S P+CGFEV+LD+IP + + T+TK + LS VKR Sbjct: 655 GPKNILGTFGEFHPKTLEEMDVSGPLCGFEVFLDAIPEPKARATRTKPRLDLSPFQAVKR 714 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + AGTL + D +L+ DV VFDVF+G +LG KKS+AI+V IQP++ T Sbjct: 715 DFAFVVDKTVEAGTLTRAAASADKKLVSDVNVFDVFEGAALGPDKKSIAIEVTIQPIERT 774 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +RIVENV K+T VLRS Sbjct: 775 LTDEDFEALANRIVENVRKQTGGVLRS 801 >gi|86355922|ref|YP_467814.1| phenylalanyl-tRNA synthetase subunit beta [Rhizobium etli CFN 42] gi|86280024|gb|ABC89087.1| phenylalanyl-tRNA synthetase, beta chain protein [Rhizobium etli CFN 42] Length = 807 Score = 913 bits (2359), Expect = 0.0, Method: Composition-based stats. Identities = 433/807 (53%), Positives = 570/807 (70%), Gaps = 3/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLK+HL+TD +L++IC LT IGLEVE VD++ A PF I KVLS E++P D Sbjct: 1 MKFTLSWLKEHLETDATLDEICARLTEIGLEVEDVDDKAAFKPFVIAKVLSAEKHPQADR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG +QVVCGAPN R GL+G +A PG+ +P + + V IRG+ES GMMC Sbjct: 61 LKVLMVDTGSGAPVQVVCGAPNARAGLVGAFAAPGTYVPGIEVTLAVGNIRGVESRGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SEKEL +SD+ I++LP DAPVG + Y L DP+I+++LTPNR DC + GIA DL Sbjct: 121 SEKELQISDNHDGIIDLPEDAPVGQSYAAYAHLDDPVIEINLTPNRPDCTSIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A+GLG LK + P+++ DLDD LC GFA+ V+GVRN +P W++QRL Sbjct: 181 ASGLGVLKTRSAPAFSIEGETPVKLTLDLDDPRLCPGFALRLVRGVRNGPSPRWLQQRLT 240 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A+GLR I+ALVD+TNY++ D+G P HVFDA++I LTVRRA GE +LALD +EY L P Sbjct: 241 AIGLRPINALVDVTNYMTFDQGRPIHVFDAAKIKGNLTVRRAREGETVLALDQREYKLGP 300 Query: 300 DNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYR 359 +NVVI+ + I+SI GI+GG+H+GCDD+T DVL+E ALWDP+NIA+SG++LGIITD+RYR Sbjct: 301 NNVVISDEEGIESIGGIMGGEHSGCDDDTVDVLIESALWDPMNIAKSGRSLGIITDARYR 360 Query: 360 FERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDV 419 FERGVD + M+P L+ L+L LCGGTA+ + Y P+ + F SEVKRL+G+DV Sbjct: 361 FERGVDPEYMVPGLERTTELVLELCGGTAARAEVVGYHGYDPKVVDFPYSEVKRLTGLDV 420 Query: 420 PIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLPL 479 E+S IL RLGFSV G + V+VPSWR DV+ KADLVEE++RI+GVD IK PL Sbjct: 421 SNEESNTILTRLGFSVSGSGEHVSVAVPSWRPDVDGKADLVEEVMRIHGVDNIKPAPLES 480 Query: 480 TQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPISA 539 + R L+ Q RTR KR LA+R M+E V WSFI ++Q+ LFGGG L++ NPI+A Sbjct: 481 HAAVNGRILTTLQIRTRAAKRALAARGMLEAVTWSFIPEDQAKLFGGGSPALKLANPIAA 540 Query: 540 DMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIE 599 +MS+MR SLLPGLL A RN D+ +D AIFEVS YEND PEGQ+ +A GIR+G++ + Sbjct: 541 EMSDMRPSLLPGLLTAAQRNADKGYSDVAIFEVSGTYENDRPEGQRRVAGGIRRGTASLA 600 Query: 600 GSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIKT 658 G+GR+WS+ + + VD+FDAKADAL+VIE + + +++ E G P W+HPGRSG IK Sbjct: 601 GAGRMWSNVARGGGKPVDVFDAKADALAVIEACGLPMGNIQIEQGGPEWFHPGRSGTIKM 660 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 +IVLGYFGEFHP L+ +S +CGFEVYLD++ +KK T+TK + LS VKR Sbjct: 661 GPKIVLGYFGEFHPLTLEALDVSGALCGFEVYLDAMAEPKKKATRTKPALDLSPFQAVKR 720 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD+ + +G +V D +LI + VFD+F+G S+GEGKKSVAI+V IQP+ T Sbjct: 721 DFAFVVDKTVESGAIVKAATGADRKLITGINVFDIFEGASVGEGKKSVAIEVQIQPVDRT 780 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D L +IV +V K T VLRS Sbjct: 781 LTDEDFEALTQKIVASVTKFTGGVLRS 807 >gi|170749560|ref|YP_001755820.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] gi|170656082|gb|ACB25137.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium radiotolerans JCM 2831] Length = 806 Score = 904 bits (2336), Expect = 0.0, Method: Composition-based stats. Identities = 389/810 (48%), Positives = 535/810 (66%), Gaps = 10/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTL+WLKDHLDT+ SL+ + +TLT IGLEVE +++ AL P+ I ++L+ E++P+ D Sbjct: 1 MKFTLAWLKDHLDTEASLDTVAETLTRIGLEVEGIEDKAAALKPYVIARILTAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + +DTG + +QVVCGAPN R L+ V+APPG+ +P N+ ++V IRG+ES GM+ Sbjct: 61 RLRVCTVDTGAGEPVQVVCGAPNARADLVSVFAPPGTYVPGKNITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I+ELP DAPVG + Y L DP+I+++LTPNR DC V GIA DL Sbjct: 121 CSGAELGLGDDHDGILELPTDAPVGQAYALYAGLDDPVIEINLTPNRPDCASVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 AAG+G LK + P+E+ LD D L FA+ V+GVRN +P WM+ Sbjct: 181 AAAGIGTLKRETLPGVRGEGPCPVEVALALDPADRHLAPLFALRLVRGVRNGPSPAWMQA 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I++LVDITNYV+ DRG P HVFDA++++ LTVRRA GE + ALD + + Sbjct: 241 RLRAIGLRPINSLVDITNYVTFDRGRPLHVFDAAKVAGALTVRRAREGESLRALDGRTHA 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L+ D VVIA ++SIAGI+GG+ +GCD TTDVL+E ALWDP NIA+SG+ LGIITD+ Sbjct: 301 LTDDTVVIADANGVESIAGIMGGEASGCDAGTTDVLIESALWDPTNIAQSGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGGT ++ +A I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFTLPGLDLATRLVVDLCGGTPTEARVAGAPPESEHVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 IDVP + +ILE LGF V G D+ V PSWR D+E KADLVEE++RI G+D+I++EP Sbjct: 421 IDVPRAEMQQILETLGFHVSGAGDRVTVRPPSWRPDIEGKADLVEEVVRIAGLDRIEAEP 480 Query: 477 LPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNP 536 LP + L++ Q RTR KR LASR +ME V WSF+ + +VLFGGG +L + NP Sbjct: 481 LPPLAGIGRPLLTVMQKRTRLAKRALASRGLMEAVTWSFVPHDDAVLFGGGGADLILANP 540 Query: 537 ISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSS 596 I++++S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ AA +R+G + Sbjct: 541 IASELSDMRPSLVPGLLRAAQRNADRGYPDAALFEVGQCFASDEPEGQTIRAAAVRRGGA 600 Query: 597 GIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGI 655 + G+GR W K+ VD FDAKADAL+++ V L+ +G PSW HPGRSG Sbjct: 601 TLAGAGRHWDGKAAT----VDAFDAKADALALLGSLGVPTGGLQITAGGPSWLHPGRSGT 656 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + +G+FGE HP L L + FE+ LD++P+ + K TK K + LS P Sbjct: 657 LRFGPKTEIGWFGEVHPRTLQALDLKGTLVAFEIVLDALPLPKLKPTKAKAALALSEFQP 716 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V + +PAG +V +N + +L+ V VFD+++G + +G KSVAI V +QP+ Sbjct: 717 LSRDFAFVVGRDVPAGDIVKAAQNAERKLVTGVDVFDLYEGPGVPDGAKSVAIAVRLQPV 776 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + RIV V +KT A LR+ Sbjct: 777 ERTLTDAEIEAVSARIVAEVSRKTGATLRA 806 >gi|163851057|ref|YP_001639100.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] gi|163662662|gb|ABY30029.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium extorquens PA1] Length = 807 Score = 897 bits (2317), Expect = 0.0, Method: Composition-based stats. Identities = 377/810 (46%), Positives = 521/810 (64%), Gaps = 9/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I ++LT IGLEVE +++ AL P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAESLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTPYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A GLG LK + P+ + FD D LC FA+ V+GV N +P WM++ Sbjct: 181 AATGLGTLKREPMPPVRGEGPCPVPVTLAFDEHDKGLCPLFALRLVRGVTNGPSPEWMQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 241 RLRAIGLRPINALVDITNYMTFDRGRPLHVFDAGKVAGGLTVRRAEEGESLVALDGKTYR 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD+ Sbjct: 301 LDSDAVVIADGNGVESIAGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFALPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 I++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ +P Sbjct: 421 IELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPKP 480 Query: 477 LP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 LP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + N Sbjct: 481 LPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALAN 540 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ A G+R+G+ Sbjct: 541 PIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRGT 600 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + GSGR WS +E F + V L+ +G P W HPGRSG Sbjct: 601 ARHAGSGRHWSGAAEAVDAFE---AKADALALLAALGVPTGGLQIVAGGPDWLHPGRSGT 657 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 658 LQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDLQA 717 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V + +PA ++ + + +LI + VFD+++G + +G KSVA+ V +QP Sbjct: 718 ISRDFAFVVPRDVPAADILKAAQGAERKLITGIEVFDLYEGAGIPDGSKSVAVAVRLQPS 777 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + +IV V KKT A LRS Sbjct: 778 ERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|240138191|ref|YP_002962663.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens AM1] gi|240008160|gb|ACS39386.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens AM1] Length = 807 Score = 895 bits (2314), Expect = 0.0, Method: Composition-based stats. Identities = 376/810 (46%), Positives = 520/810 (64%), Gaps = 9/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I +TLT IGLEVE +++ AL P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAETLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTPYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A GLG LK + P+ + D D LC FA+ V+GV N +P WM++ Sbjct: 181 AATGLGTLKREPMPPVRGEGPCPVPVTLQFDPHDKGLCPLFALRLVRGVTNGPSPEWMQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 241 RLRAIGLRPINALVDITNYMTFDRGRPLHVFDAKKVAGGLTVRRAEEGESLVALDGKTYR 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVIA ++SIAGIIGG+ +GCD++TTDVL+E ALWDP NIAR+G+ LGIITD+ Sbjct: 301 LDSDAVVIADGNGVESIAGIIGGEASGCDESTTDVLIESALWDPRNIARTGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFTLPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 I++ + LE LGF + G D+ +V PSWR DVE +ADLVEEI+RI G+D+I+ +P Sbjct: 421 IELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGRADLVEEIVRIAGLDRIEPKP 480 Query: 477 LP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 LP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + N Sbjct: 481 LPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALAN 540 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PEGQ A G+R+G+ Sbjct: 541 PIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRGT 600 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + GSGR WS +E F + V L+ +G P W HPGRSG Sbjct: 601 ARHAGSGRHWSGAAETVDAFE---AKADALALLAALGVPTGGLQVVAGGPDWLHPGRSGA 657 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 658 LQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDLQA 717 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V + + A ++ + + +LI + VFD+++G + +G KSVA+ V +QP Sbjct: 718 ISRDFAFVVPRDVAAADILKAAQGAERKLITGIEVFDLYEGAGIPDGSKSVAVAVRLQPS 777 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + +IV V KKT A LRS Sbjct: 778 ERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|306842765|ref|ZP_07475407.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO2] gi|306287109|gb|EFM58614.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO2] Length = 804 Score = 894 bits (2311), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 554/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK ++LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALNLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|239833164|ref|ZP_04681493.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] gi|239825431|gb|EEQ96999.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum intermedium LMG 3301] Length = 804 Score = 894 bits (2310), Expect = 0.0, Method: Composition-based stats. Identities = 416/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A F I +VL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFKAFKIARVLTAVQHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +D G + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LRVLSVDAGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + Y L D +I++ LTPNR+DC G+ GIA DL Sbjct: 121 SERELELSDEHNGIIDLPEDAPVGTSFATYAGLDDAVIEIGLTPNRADCTGIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P++I D D C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPEAVKGEGETPVKIILDQDAKHPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE IL LD +EY Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAAKDGETILGLDQREYKFK 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA + +SIAGI+GG+H+GCD+NTTDVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 PGMYVIADENGPESIAGIMGGEHSGCDENTTDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + SL+L LCGG + + + +PR + F SEVKRL+GID Sbjct: 361 RFERGVDPEMMVPGAEIATSLVLELCGGAPTVLDVVGYGKPEPRVVDFPVSEVKRLTGID 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP E SL IL+RLGF V G+ + VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VPYETSLDILKRLGFGVEGDGKVIKAIVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDTALFEVSGIYEGDTPDDQRRVAGGVRRGTARV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 +GSGR W+ + F DA A P +D ++ E+G P W+HPGRSG +K Sbjct: 601 DGSGRFWAGNAAPVGVFDAKADALAALEVAGAP---VDRIQIEAGGPEWFHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLGYFGEFHP+ L+ +S +CGFEVY+D+IP + K T+TK ++LS +KR Sbjct: 658 GPKVVLGYFGEFHPDTLEALDVSGALCGFEVYIDAIPEPKAKSTRTKPALNLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + D +LI V VFDVF G SLGEGKKS+A++VL+QP T Sbjct: 718 DFAFVVDADVEAGNVVKAVSTADKKLIVGVQVFDVFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L ++V +V K+T VLR Sbjct: 778 LTDEDLETLSKQVVASVAKQTGGVLRG 804 >gi|306843542|ref|ZP_07476143.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO1] gi|306276233|gb|EFM57933.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. BO1] Length = 804 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDTGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGG + EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGSKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNIVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|23502971|ref|NP_699098.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis 1330] gi|161620034|ref|YP_001593921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella canis ATCC 23365] gi|163844139|ref|YP_001628543.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis ATCC 23445] gi|225626496|ref|ZP_03784535.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|254700755|ref|ZP_05162583.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|254705127|ref|ZP_05166955.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|254707357|ref|ZP_05169185.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|256370521|ref|YP_003108032.1| phenylalanyl-tRNA synthetase beta subunit [Brucella microti CCM 4915] gi|260169530|ref|ZP_05756341.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|260567406|ref|ZP_05837876.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 4 str. 40] gi|261314842|ref|ZP_05954039.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261751264|ref|ZP_05994973.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261755829|ref|ZP_05999538.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] gi|261759057|ref|ZP_06002766.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|30316233|sp|Q8FXX4|SYFB_BRUSU RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|23349008|gb|AAN31013.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella suis 1330] gi|161336845|gb|ABX63150.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella canis ATCC 23365] gi|163674862|gb|ABY38973.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella suis ATCC 23445] gi|225618153|gb|EEH15196.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ceti str. Cudo] gi|256000684|gb|ACU49083.1| phenylalanyl-tRNA synthetase beta subunit [Brucella microti CCM 4915] gi|260156924|gb|EEW92004.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 4 str. 40] gi|261303868|gb|EEY07365.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M163/99/10] gi|261739041|gb|EEY27037.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. F5/99] gi|261741017|gb|EEY28943.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 5 str. 513] gi|261745582|gb|EEY33508.1| phenylalanyl-tRNA synthetase subunit beta [Brucella suis bv. 3 str. 686] Length = 804 Score = 893 bits (2308), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 553/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254718166|ref|ZP_05179977.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|265983120|ref|ZP_06095855.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306837680|ref|ZP_07470549.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] gi|264661712|gb|EEZ31973.1| phenylalanyl-tRNA synthetase subunit beta [Brucella sp. 83/13] gi|306407238|gb|EFM63448.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella sp. NF 2653] Length = 804 Score = 892 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 553/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRAARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PL Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLQ 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK ++LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALNLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNIVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254694745|ref|ZP_05156573.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 3 str. Tulya] gi|261215072|ref|ZP_05929353.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 3 str. Tulya] gi|260916679|gb|EEX83540.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 3 str. Tulya] Length = 804 Score = 892 bits (2304), Expect = 0.0, Method: Composition-based stats. Identities = 414/807 (51%), Positives = 554/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL AT RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAATQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|256158624|ref|ZP_05456511.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|256254032|ref|ZP_05459568.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|261221171|ref|ZP_05935452.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|265997131|ref|ZP_06109688.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] gi|260919755|gb|EEX86408.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti B1/94] gi|262551599|gb|EEZ07589.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M490/95/1] Length = 804 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+R GF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRFGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254709100|ref|ZP_05170911.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|256030625|ref|ZP_05444239.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|261316599|ref|ZP_05955796.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|265987671|ref|ZP_06100228.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] gi|261295822|gb|EEX99318.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis B2/94] gi|264659868|gb|EEZ30129.1| phenylalanyl-tRNA synthetase subunit beta [Brucella pinnipedialis M292/94/1] Length = 804 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 553/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLTENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ ++G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFNQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|256112449|ref|ZP_05453370.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|265993884|ref|ZP_06106441.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] gi|262764865|gb|EEZ10786.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 3 str. Ether] Length = 804 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 554/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRTLTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ +L +IV +V K+T VLR Sbjct: 778 LTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|62290963|ref|YP_222756.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 1 str. 9-941] gi|82700874|ref|YP_415448.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis biovar Abortus 2308] gi|189025177|ref|YP_001935945.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus S19] gi|237816468|ref|ZP_04595461.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|254690258|ref|ZP_05153512.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 6 str. 870] gi|254696374|ref|ZP_05158202.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 2 str. 86/8/59] gi|254731288|ref|ZP_05189866.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 4 str. 292] gi|256258511|ref|ZP_05464047.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|260546227|ref|ZP_05821967.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus NCTC 8038] gi|260755797|ref|ZP_05868145.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 6 str. 870] gi|260759020|ref|ZP_05871368.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 4 str. 292] gi|260760745|ref|ZP_05873088.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 2 str. 86/8/59] gi|260884821|ref|ZP_05896435.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297247349|ref|ZP_06931067.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 5 str. B3196] gi|75496047|sp|Q57AD9|SYFB_BRUAB RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|91208229|sp|Q2YQV4|SYFB_BRUA2 RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|62197095|gb|AAX75395.1| PheT, phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 1 str. 9-941] gi|82616975|emb|CAJ12083.1| ATP/GTP-binding site motif A (P-loop):t-RNA-binding region:Bacterial phenylalanyl-tRNA synthetase, beta subunit:Ferredoxin-fo [Brucella melitensis biovar Abortus 2308] gi|189020749|gb|ACD73471.1| phenylalanyl-tRNA synthetase beta subunit [Brucella abortus S19] gi|237788535|gb|EEP62750.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus str. 2308 A] gi|260096334|gb|EEW80210.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus NCTC 8038] gi|260669338|gb|EEX56278.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 4 str. 292] gi|260671177|gb|EEX57998.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 2 str. 86/8/59] gi|260675905|gb|EEX62726.1| phenylalanine-tRNA ligase beta [Brucella abortus bv. 6 str. 870] gi|260874349|gb|EEX81418.1| phenylalanyl-tRNA synthetase subunit beta [Brucella abortus bv. 9 str. C68] gi|297174518|gb|EFH33865.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella abortus bv. 5 str. B3196] Length = 804 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IA +G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIASTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|148559119|ref|YP_001259921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ovis ATCC 25840] gi|148370376|gb|ABQ60355.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella ovis ATCC 25840] Length = 804 Score = 891 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 553/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDLQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|254713474|ref|ZP_05175285.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|254716170|ref|ZP_05177981.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261217942|ref|ZP_05932223.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261321208|ref|ZP_05960405.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] gi|260923031|gb|EEX89599.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M13/05/1] gi|261293898|gb|EEX97394.1| phenylalanyl-tRNA synthetase subunit beta [Brucella ceti M644/93/1] Length = 804 Score = 890 bits (2301), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RT + +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTCHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|225853550|ref|YP_002733783.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis ATCC 23457] gi|256045728|ref|ZP_05448606.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|256262965|ref|ZP_05465497.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|260563027|ref|ZP_05833513.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|265992146|ref|ZP_06104703.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|225641915|gb|ACO01829.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella melitensis ATCC 23457] gi|260153043|gb|EEW88135.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|263003212|gb|EEZ15505.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. Rev.1] gi|263092839|gb|EEZ17014.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 2 str. 63/9] gi|326410122|gb|ADZ67187.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis M28] gi|326539841|gb|ADZ88056.1| phenylalanyl-tRNA synthetase, beta subunit [Brucella melitensis M5-90] Length = 804 Score = 890 bits (2300), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 554/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ +L +IV +V K+T VLR Sbjct: 778 LTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|256060087|ref|ZP_05450269.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261324062|ref|ZP_05963259.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] gi|261300042|gb|EEY03539.1| phenylalanyl-tRNA synthetase subunit beta [Brucella neotomae 5K33] Length = 804 Score = 890 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 412/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGLEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|17988287|ref|NP_540921.1| phenylalanyl-tRNA synthetase subunit beta [Brucella melitensis bv. 1 str. 16M] gi|30316258|sp|Q8YE74|SYFB_BRUME RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|17984058|gb|AAL53185.1| phenylalanyl-tRNA synthetase beta chain [Brucella melitensis bv. 1 str. 16M] Length = 804 Score = 890 bits (2299), Expect = 0.0, Method: Composition-based stats. Identities = 411/807 (50%), Positives = 553/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL SD+ I++L +APVG + Y+ +DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELDFSDEHNGIIDLAENAPVGTSFAAYMGFNDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFDDIALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ +L +IV +V K+T VLR Sbjct: 778 LTDEDLEVLSKQIVASVAKQTGGVLRG 804 >gi|188580858|ref|YP_001924303.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] gi|179344356|gb|ACB79768.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium populi BJ001] Length = 807 Score = 889 bits (2298), Expect = 0.0, Method: Composition-based stats. Identities = 382/811 (47%), Positives = 534/811 (65%), Gaps = 11/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I +TLT IGLEVE +++ AL P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAISETLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDPGDGQPLQVVCGAPNARTGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL LS+D I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLSEDHDGILDLPADAPVGTPYAVWAGLDDPVIEINLTPNRSDCASIHGIARDL 180 Query: 179 VAAGLGKLKEINISCP--LSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A G+G LK + + P+ ++FD D LC FA+ V+GV+N +P WM++ Sbjct: 181 AATGIGTLKREPMPPVRGEGACPTPVTLQFDAHDKGLCPLFALRLVRGVKNGPSPEWMQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 241 RLRAIGLRPINALVDITNYLTFDRGRPLHVFDAKKVAGGLTVRRAEDGESLVALDGKTYR 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L D VVIA D ++SI GI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD+ Sbjct: 301 LDSDTVVIADDKGVESIGGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGG+ S IA + I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFALPGLDLATRLVIDLCGGSPSQATIAGEVPELSHVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 I++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ +P Sbjct: 421 IELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPKP 480 Query: 477 LP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 LP + V + L++ Q R R KR LASR M+E V +SFI + LFGGG+ +L + N Sbjct: 481 LPRIETVAVEPMLTVLQRRGRLAKRALASRGMLEAVTYSFIPHADARLFGGGKPDLALAN 540 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+AD+S+MR SL+PGLL+A N DR D A+FEV + +D PEGQ A G+R+G+ Sbjct: 541 PIAADLSDMRPSLVPGLLRAAQANADRGFPDTALFEVGQCFASDEPEGQSLRATGLRRGT 600 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSG 654 + G+GR WS +E VD F+AKADAL+++ V L+ +G P W HPGRSG Sbjct: 601 ARHSGAGRHWSGAAE----VVDAFEAKADALALLAALGVPTGGLQIVAGGPDWLHPGRSG 656 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 ++ + V+G+FGE HP +L L + FE+ LD++P+ + + TK K + LS L Sbjct: 657 TLQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDALPLPRHRPTKAKPALALSDLQ 716 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 + RD AF+V + +PA ++ + + ++I + VFD+++G + EG KSVA+ V +QP Sbjct: 717 AISRDFAFVVPRDVPAADILKAAQGAERKMITGIEVFDLYEGTGIPEGAKSVAVAVRLQP 776 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + +IV V KKT A LRS Sbjct: 777 SERTLTDAEIEAVSAKIVAEVGKKTGATLRS 807 >gi|254560751|ref|YP_003067846.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens DM4] gi|254268029|emb|CAX23900.1| phenylalanine tRNA synthetase, beta-subunit [Methylobacterium extorquens DM4] Length = 807 Score = 889 bits (2297), Expect = 0.0, Method: Composition-based stats. Identities = 375/810 (46%), Positives = 520/810 (64%), Gaps = 9/810 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDT+ SL+ I ++LT IGLEVE +++ AL P+ I +V+S E++P+ D Sbjct: 1 MKFTLSWLKDHLDTEASLDAIAESLTRIGLEVEGIEDKAAALRPYVIARVISAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 + ++D G Q +QVVCGAPN R G+L V+APPG+ +P + ++V IRG+ES GM+ Sbjct: 61 RLRVCQVDAGDGQPLQVVCGAPNARAGMLSVFAPPGTYVPGKAITLSVGTIRGVESRGML 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CS EL L DD I++LP DAPVG + + L DP+I+++LTPNRSDC + GIA DL Sbjct: 121 CSGAELGLGDDHDGILDLPADAPVGTAYALWAGLDDPVIEINLTPNRSDCTSIHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIK--FDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A GLG LK + P+ + FD D LC FA+ V+GV N +P WM++ Sbjct: 181 AATGLGTLKREPMPPVRGEGPCPVPVTLAFDEHDKGLCPLFALRLVRGVTNGPSPEWMQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL+A+GLR I+ALVDITNY++ DRG P HVFDA +++ LTVRRA GE ++ALD + Y Sbjct: 241 RLRAIGLRPINALVDITNYMTFDRGRPLHVFDAGKVAGGLTVRRAEEGESLIALDGKTYR 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 L + VVIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWDP NIAR+G+ LGIITD+ Sbjct: 301 LDSEAVVIADANGVESIAGIMGGEASGCDETTTDVLIESALWDPRNIARTGRRLGIITDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSG 416 RYRFERGVD +P L L++ LCGG+ S+ IA I R I F +EV+RL+G Sbjct: 361 RYRFERGVDPAFALPGLDLATRLVIDLCGGSPSEARIAGEIPDLDRVIDFPWTEVRRLAG 420 Query: 417 IDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEP 476 I++ + LE LGF + G D+ +V PSWR DVE KADLVEEI+RI G+D+I+ +P Sbjct: 421 IELSRAEMKVTLESLGFHISGSGDRVKVLPPSWRPDVEGKADLVEEIVRIAGLDRIEPKP 480 Query: 477 LP-LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 LP + V + L++ Q R R KR LA R M+E V +SF++ E + LFGGG +L + N Sbjct: 481 LPRVETVAVEPMLTVLQRRGRLAKRALAGRGMLEAVTYSFVAHEDARLFGGGGADLALAN 540 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PI+AD+S+MR SL+PGLL+A RN DR D A+FEV + +D PE Q A G+R+G+ Sbjct: 541 PIAADLSDMRPSLVPGLLRAAQRNADRGFPDTALFEVGQCFASDEPECQSLRATGLRRGT 600 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGI 655 + GSGR WS +E F + V L+ +G P W HPGRSG Sbjct: 601 ARHAGSGRHWSGAAEAVDAFE---AKADALALLAALGVPTGGLQIVAGGPDWLHPGRSGT 657 Query: 656 IKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHP 715 ++ + V+G+FGE HP +L L + FE+ LDS+P+ + + TK K + L L Sbjct: 658 LQFGPKNVVGHFGELHPRLLKAMDLKGTLVAFEITLDSLPLPRHRPTKAKPALVLPDLQA 717 Query: 716 VKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPL 774 + RD AF+V + +PA ++ + + +LI + VFD+++G + +G KSVA+ V +QP Sbjct: 718 ISRDFAFVVPRDVPAADILKAAQGAERKLITGIEVFDLYEGTGIRDGSKSVAVAVRLQPS 777 Query: 775 KDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 + T D +I + +IV V KKT A LRS Sbjct: 778 ERTLTDAEIEAVSAKIVAEVSKKTGATLRS 807 >gi|153008133|ref|YP_001369348.1| phenylalanyl-tRNA synthetase subunit beta [Ochrobactrum anthropi ATCC 49188] gi|151560021|gb|ABS13519.1| phenylalanyl-tRNA synthetase, beta subunit [Ochrobactrum anthropi ATCC 49188] Length = 804 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 413/807 (51%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +LE+I + LT IGLEVE VD+R A F I KV+S ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLEQIVEKLTDIGLEVESVDDRAAFKAFKIAKVVSAVQHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L +DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LRVLSVDTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++LP DAPVG + Y L D +I++ LTPNR+DC G+ GIA DL Sbjct: 121 SERELELSDEHNGIIDLPEDAPVGTSFATYAGLDDAVIEIGLTPNRADCTGIHGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG +K P+++ D DD + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTVKNTLPEAVKGEGETPVKVILDQDDENPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE IL LD +EY Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRLAKDGETILGLDQREYKFK 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P VIA + +SIAGI+GG+H+GCD+NTTDVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 PGMYVIADENGPESIAGIMGGEHSGCDENTTDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + PR I F SEVKRL+GI+ Sbjct: 361 RFERGVDPEMMVPGAELATKLVLELCGGEPTVLDVVGYSKPTPRVIDFPVSEVKRLTGIE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V + S IL+RLGFSV G+ + +VP+WR DVE KADLVEE++RI+G++QI +PLP Sbjct: 421 VSYDASFDILKRLGFSVEGDGKVIKATVPTWRGDVEGKADLVEEVMRIHGINQIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS Q+ FGGG+ EL++ NPI+ Sbjct: 481 GLGTVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISDAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D A+FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLVAAQRNADRGFGDTALFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 +GSGR W+ + F DA A + P +D ++ E+G P W+HPGRSG +K Sbjct: 601 DGSGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWFHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVY+D+IP + K T+TK ++LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYIDAIPEPKAKSTRTKPALNLSQFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DFAFVVDADVEAGNVVKAVSSADKKLIAGVQVFDIFTGASLGEGKKSIAVEVLLQPQDRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +V +V K+T VLR Sbjct: 778 LTDEDLEALSKHVVASVAKQTGGVLRG 804 >gi|319780183|ref|YP_004139659.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166071|gb|ADV09609.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 802 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 424/808 (52%), Positives = 567/808 (70%), Gaps = 10/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LTSIGLEVE VD++ +L PF I +VL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVERLTSIGLEVEHVDDKSSLKPFVIARVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKPPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y + DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPEDAPVGTSFAAYAHIDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG+L I + + IK ++ LC GFA+ VKGV+N +P W++QRL Sbjct: 181 AASGLGRLVGGAIMPHVGNG--MCPIKVTIEAPELCPGFALNLVKGVKNGPSPKWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR ISALVDITNYV+ DRG P HVFDAS+++ L VRRA GEK+ ALD +EY L+ Sbjct: 239 IAIGLRPISALVDITNYVTFDRGRPLHVFDASKVAGNLVVRRARDGEKVQALDGREYTLT 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P+ VIA D ++SIAG++GG+H+GCD+NT+DVL+E ALWDPI AR+G+ LGIITD+RY Sbjct: 299 PEMCVIADDNGVESIAGVMGGEHSGCDENTSDVLIESALWDPITTARTGRTLGIITDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P ++ L+L CGGT +++ + + P+ + F SEVKRL+GI+ Sbjct: 359 RFERGVDPEFMVPGVELATKLVLDFCGGTPTEMEVVGYAGHTPKIVSFPLSEVKRLTGIE 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP +SL IL RLGF G D +V+VPSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 419 VPSAESLDILSRLGFKPEGSGDVVDVAVPSWRPDVDGKADLVEEVMRIHGVDNIAPQPLG 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR KR LA R MME V WSFI + + LFGGGQ L++ NPI+ Sbjct: 479 AHDAVNAKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPAKHAELFGGGQTALKLANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ + Sbjct: 539 ADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAKL 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGIIK 657 +GSGR W+ S V +FDAKADA++ +E + +D L+ E+G P+WYHPGRSG IK Sbjct: 599 DGSGRNWAGNS----GPVGVFDAKADAIAALEACGAPVDRLQIEAGGPAWYHPGRSGTIK 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + VLG FGEFHP L+ +S P+CGFEV++D++P + K TKTK + LS VK Sbjct: 655 LGPKTVLGTFGEFHPKTLEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSPFQAVK 714 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + AGTLV D +LI V+VFD+F+G SLGEGKKS+AI+V IQP++ Sbjct: 715 RDFAFVVDKSVEAGTLVRAALAADKKLITAVSVFDIFEGASLGEGKKSIAIEVSIQPVEK 774 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RI+ENV K+T VLR Sbjct: 775 TLTDEDFEALAKRIIENVGKQTGGVLRG 802 >gi|294851349|ref|ZP_06792022.1| phenylalanyl-tRNA synthetase [Brucella sp. NVSL 07-0026] gi|294819938|gb|EFG36937.1| phenylalanyl-tRNA synthetase [Brucella sp. NVSL 07-0026] Length = 804 Score = 888 bits (2295), Expect = 0.0, Method: Composition-based stats. Identities = 411/807 (50%), Positives = 552/807 (68%), Gaps = 6/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L++I + LT IGLEVE VD+R A FTI +VL+ R+PD D Sbjct: 1 MKFTLSWLKDHLETDATLDEIVEKLTDIGLEVESVDDRAAFRAFTIARVLTATRHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 +L ++TG + +QVVCGAPN R GL+GV PG +P ++ ++V KIRG+ES GMMC Sbjct: 61 LQVLSVNTGDGKPVQVVCGAPNARAGLVGVLGRPGDYVPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 SE+EL LSD+ I++L +APVG + Y+ L DPII++ LTPNR+DC G+RGIA DL Sbjct: 121 SERELELSDEHNGIIDLAENAPVGTSFAAYMGLDDPIIEIGLTPNRADCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDD-SSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAGLG LK P+++ D D + C GFA+ VKGV+N +P WM+QRL Sbjct: 181 AAGLGTLKNTLPDAVKGEGETPVKVILDQDAGNPFCTGFALRMVKGVKNGPSPKWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 KA+GLR I+ALVDITNYV+ D+G P HVFDA+++ LTVR A GE ILALD +EY L+ Sbjct: 241 KAIGLRPINALVDITNYVTFDQGRPLHVFDAAKVKGNLTVRTARDGETILALDQREYKLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 VIA + +SIAGI+GG+H+GCD+NT DVL+E ALWDP IAR+G+ LGI+TD+RY Sbjct: 301 AGMYVIADENGPESIAGIMGGEHSGCDENTVDVLIESALWDPRMIARTGRELGIVTDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P + L+L LCGG + + + + R I F +EVKRL+G+D Sbjct: 361 RFERGVDPEMMVPGAEIATKLVLELCGGQPTVLDVVGYKPHTARVIDFPVTEVKRLTGLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 V ED+ IL+RLGF V G+ +VPSWR DVE KADLVEE++RI+G+++I +PLP Sbjct: 421 VSYEDAFDILKRLGFGVEGDGKTIRATVPSWRGDVEGKADLVEEVMRIHGINRIDPQPLP 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + R L+ Q RTR+ +R+LASR MME V +SFIS+ Q+ FGGG+ EL++ NPI+ Sbjct: 481 SHGAVNGRILTTLQIRTRHARRMLASRGMMEAVTYSFISEAQAKAFGGGKPELKLANPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGLL A RN DR D +FEVS +YE DTP+ Q+ +A G+R+G++ + Sbjct: 541 ADMSDMRPSLLPGLLAAAQRNADRGFGDIVLFEVSGIYEGDTPDKQRRVAGGVRRGTAKV 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKT 658 EG+GR W+ + F DA A + P +D ++ E+G P W HPGRSG +K Sbjct: 601 EGAGRFWAGNAAPVGVFDAKADALAALEAAGAP---VDRIQIEAGGPEWLHPGRSGTLKL 657 Query: 659 SAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVKR 718 ++VLG FGEFHP+ L+ +S +CGFEVYLD+IP + K +TK + LS +KR Sbjct: 658 GPKVVLGTFGEFHPDTLEALDVSGALCGFEVYLDAIPEPKAKSARTKPALSLSLFQSLKR 717 Query: 719 DLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKDT 777 D AF+VD + AG +V + + D +LI V VFD+F G SLGEGKKS+A++VL+QP T Sbjct: 718 DYAFVVDAAVEAGNVVKAVSSADKKLIVGVQVFDIFTGASLGEGKKSIAVEVLLQPQNRT 777 Query: 778 FRDDDIRILMDRIVENVVKKTNAVLRS 804 D+D+ L +IV +V K+T VLR Sbjct: 778 LTDEDLEALSKQIVASVAKQTGGVLRG 804 >gi|260463248|ref|ZP_05811450.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] gi|259031098|gb|EEW32372.1| phenylalanyl-tRNA synthetase, beta subunit [Mesorhizobium opportunistum WSM2075] Length = 802 Score = 888 bits (2294), Expect = 0.0, Method: Composition-based stats. Identities = 427/808 (52%), Positives = 564/808 (69%), Gaps = 10/808 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD +L +I + LTSIGLEVE VD++ +L PF I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDATLAEIVERLTSIGLEVEHVDDKSSLKPFVIAKVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQE-IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKPPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y L DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPADAPVGTSFATYAHLDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+GLG+L I S +K + LC GFA+ VKGV+N +P W++QRL Sbjct: 181 AASGLGRLVGGAIMPHAGSG--MCPVKVKIVAPELCPGFALRLVKGVKNGPSPKWLQQRL 238 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR ISALVDITNYV+ DRG P HVFDA +++ L VRRA +GEK+LALD +EY L+ Sbjct: 239 IAIGLRPISALVDITNYVTFDRGRPLHVFDARKVAGNLVVRRARNGEKVLALDGREYTLT 298 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 P+ VIA D ++SIAGI+GG+H+GCD+NTTDVLVE ALWDPI AR+G+ LGIITD+RY Sbjct: 299 PEMCVIADDDGVESIAGIMGGEHSGCDENTTDVLVESALWDPITTARTGRTLGIITDARY 358 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + M+P ++ L+L CGGT ++I +A ++P+ + F S+++RL+GI+ Sbjct: 359 RFERGVDPEFMVPGVELATKLVLDFCGGTPTEIEVAGYGGHQPKMVSFPLSDIRRLTGIE 418 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 VP +SL IL RLGF+ G D V+VPSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 419 VPRAESLDILSRLGFTADGSGDVVNVTVPSWRPDVDGKADLVEEVMRIHGVDNIAPQPLG 478 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 + + L+ Q RTR KR LA R MME V WSFI + LFGGGQ L++ NPI+ Sbjct: 479 AHDAVNAKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPARHAELFGGGQTALKLANPIA 538 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ + Sbjct: 539 ADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAKL 598 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGIIK 657 +GSGR W+ S V +FDAKADA++ +E + +D L+ E G P+WYHPGRSG IK Sbjct: 599 DGSGRNWAGNSGA----VGVFDAKADAIAALEACGAPVDRLQIEPGGPAWYHPGRSGTIK 654 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 + VLG FGEFHP L+ +S P+CGFEV++D++P + K TKTK + LS+ VK Sbjct: 655 LGPKTVLGTFGEFHPKTLEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSAFQAVK 714 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + AGTLV D +LI V+VFD+F+G SLG KKS+AI+V IQP++ Sbjct: 715 RDFAFVVDRSVEAGTLVRAALAADKKLITGVSVFDIFEGASLGADKKSIAIEVSIQPVEK 774 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L RIVENV K+T VLR Sbjct: 775 TLTDEDFEALAKRIVENVGKQTGGVLRG 802 >gi|328545356|ref|YP_004305465.1| Phenylalanyl-tRNA synthetase beta subunit [polymorphum gilvum SL003B-26A1] gi|326415098|gb|ADZ72161.1| Phenylalanyl-tRNA synthetase beta subunit [Polymorphum gilvum SL003B-26A1] Length = 805 Score = 887 bits (2291), Expect = 0.0, Method: Composition-based stats. Identities = 392/809 (48%), Positives = 543/809 (67%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL++I + LT IGLEVE+V +R A L+PFTI +V+S ER+P+ D Sbjct: 1 MKFTLSWLKDHLETDASLDQIVERLTMIGLEVEQVTDRAAKLAPFTIARVISAERHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG + +Q+VCGAPN R GL+GV PG IP + ++V KIR +ES GMM Sbjct: 61 RLQVLKVDTGSGEPLQIVCGAPNARAGLVGVLGRPGDHIPGLGVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I+ELP DAPVG R + + L DP+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSDEHTGIIELPADAPVGARFAAWSGLDDPVIEIGLTPNRPDCTGVHGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLG LKE P + D D LCK F + V+GV+N AP WM++R Sbjct: 181 AAAGLGTLKERRHEQVRGGYPCPTGVTLDFGADKPLCKAFGLRLVRGVKNGPAPKWMQER 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ALVDITNY++ D+G P HVFDA+++ L VRRA +GE IL L+ + Y+L Sbjct: 241 LIAIGLRPINALVDITNYMTFDQGRPLHVFDAAKVKGDLVVRRAAAGETILGLNGKSYEL 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 + VIA ++SIAGI+GG+ +GCD+ TTDVL+E ALWD NIAR+G+ LG+ TD+R Sbjct: 301 DGETCVIADANGVESIAGILGGEPSGCDETTTDVLIESALWDEDNIARTGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L+ L+L LCGG S++ +A ++ R I F SEVKRL+G+ Sbjct: 361 YRFERGVDPDFMLPGLEMATRLVLELCGGEPSEVVVAGSVPETARIIDFPYSEVKRLTGL 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ + + L+ LGF + G D +V+ PSWR D+E KADLVEE++RI G+D++ + PL Sbjct: 421 DLSVPEINVTLKALGFWLSGAGDTVKVAAPSWRPDIEGKADLVEEVVRIVGLDRVSNTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P T R L+ Q R +R LA+R + E V WSFIS+ Q+ FGGG L + NPI Sbjct: 481 PRTGSVGARVLTTGQIRRSRARRTLAARGLDEAVTWSFISRGQAEAFGGGAGTLTLANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 SADMS+MR SLLPGL+ A RN DR AD A+FEV ++ +DTPEGQ+ +AAG+R+G++ Sbjct: 541 SADMSDMRPSLLPGLITAAQRNADRGFADTALFEVGQIFADDTPEGQRMVAAGVRRGTAR 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGII 656 G+GR WS + VD+F+A+ADA +V+ + +D L+ + AP+W+HPGRSG + Sbjct: 601 FAGAGRHWSGSAGA----VDVFEARADAEAVLSAIGAPVDKLQVHTDAPAWFHPGRSGTL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + +L FGE HP L + P+ GFE++LD++P + + T++K + ++ L PV Sbjct: 657 KLGPKNLLAVFGEIHPRTLGLLDIEGPLVGFEIHLDAVPEPKARATRSKGALDIADLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF+VDQ + A L+ + D+ LI DVT+FDV+ G + +G+KS+AI V +QP + Sbjct: 717 RRDFAFVVDQDVAADRLIKAARGADKALIADVTLFDVYVGAGIADGRKSLAIDVTLQPKE 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T +++I + +IV V K T LR Sbjct: 777 RTLTEEEIDAVGKKIVAAVEKATGGTLRG 805 >gi|163867390|ref|YP_001608584.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella tribocorum CIP 105476] gi|161017031|emb|CAK00589.1| phenylalanyl-tRNA synthetase beta chain [Bartonella tribocorum CIP 105476] Length = 804 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 404/807 (50%), Positives = 548/807 (67%), Gaps = 8/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL+ IC+ LT+IGLEV+ VD+R +L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDDICEKLTAIGLEVDHVDDRSSLKDFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL IDTG +QVVCGAPN R GL+GV A PG+ IP ++ ++V KIRG+ES GMMC Sbjct: 61 LQILSIDTGTATPVQVVCGAPNARAGLVGVLARPGTYIPGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+ELP DAP+G + Y L DPIID+ LTPNRSDC G+RGIA DL Sbjct: 121 SQAELELSNEHDGIIELPKDAPIGDSFAAYAGLDDPIIDIGLTPNRSDCTGIRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 A+G+G+LKE+++ +S PL++ D SSLC GFA+ V V+N +P WM+QRL Sbjct: 181 ASGIGQLKELSLPKFEASFDTPLDVSLDFSQTSSLCLGFALREVCNVQNGASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVD+TNY+ D G P HVFDA +I L VR A GE++ AL+ + Y L+ Sbjct: 241 SAIGLRPINALVDMTNYICFDLGRPLHVFDADKIKGSLYVRCAREGEQLQALNGKTYHLN 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + VIA + + SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 VQDCVIADEEGVVSIAGIMGGERTSCDETTRRVIIESALWDAQSIAQTGRTLGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M L+ L+L LCGG S I + ++I F SE+KRL+ +D Sbjct: 361 RFERGVDSAFMETGLEIATELVLRLCGGEVSKAKIVGYQQQETKQIAFPFSEIKRLTHLD 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + + IL +LGF V G+ + V VPSWR D+ KADLVEE++RIYG+D+I+ PL Sbjct: 421 IEPAKVISILTKLGFCVEGKGNIVTVKVPSWRPDIMGKADLVEEVMRIYGLDKIQPVPLE 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 L+ Q R+R + LA R M E V WSFIS+ Q++ FGGGQ+EL+++NPI+ Sbjct: 481 NFTKGKDHVLTCAQIRSRAARLSLAHRGMKEAVTWSFISENQALSFGGGQKELKLVNPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS MR SLLPGLL A RN DR +D A+FE+S +YE DTP+ Q+ + +GIR+G+ Sbjct: 541 ADMSVMRPSLLPGLLMAAQRNADRGFSDLALFEISSIYEGDTPDKQRRVVSGIRRGTEQF 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 EG+GR W+ + VD+FDAKADAL+V+E + + ++ E GAP WYHPGRSG+IK Sbjct: 601 EGAGRFWNGNATA----VDVFDAKADALAVLEACDIDVGKVQIEVGAPDWYHPGRSGVIK 656 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 ++I+LG+FG HP L+ +S P+CGFE++LD IP +KK TK++ + LS V+ Sbjct: 657 LGSKIILGFFGVLHPATLEKLDISGPLCGFEIFLDQIPEPKKKTTKSRPPLKLSPFQMVR 716 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AFIVD+ I + +V + D +LI V VFD+F+ KSLGE KKSVAI+++IQPL+ Sbjct: 717 RDFAFIVDKTIASSLIVRAAQGADKKLIHSVQVFDLFEEKSLGEDKKSVAIEIVIQPLER 776 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T D D+ + ++ ENV K T A LR Sbjct: 777 TLTDKDLEEIAAKVTENVTKMTGAYLR 803 >gi|13474216|ref|NP_105784.1| phenylalanyl-tRNA synthetase subunit beta [Mesorhizobium loti MAFF303099] gi|30316274|sp|Q98CQ1|SYFB_RHILO RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|14024968|dbj|BAB51570.1| phenylalanine-tRNA ligase beta chain [Mesorhizobium loti MAFF303099] Length = 802 Score = 884 bits (2284), Expect = 0.0, Method: Composition-based stats. Identities = 422/809 (52%), Positives = 566/809 (69%), Gaps = 12/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++I + LTSIGLEVE VD++ +L PF I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEIVERLTSIGLEVEHVDDKSSLKPFVIAKVLTAVQHPDADR 60 Query: 60 CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L +DTG + +QVVCGAPN R GL+G +A PG+ +P ++ + V KIRG+ES GMM Sbjct: 61 LRVLTVDTGDGKSPVQVVCGAPNARAGLIGAFAAPGTYVPGIDVTLTVGKIRGVESHGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG + Y L DP+I+++LTPNR D V GIA DL Sbjct: 121 CSERELELSDEHNGIIDLPADAPVGTSFASYAHLDDPVIEINLTPNRPDATSVYGIARDL 180 Query: 179 VAAGLGKLKEINI-SCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 A+GLG LK + P E+ +K ++ LC GFA+ V+GV+N +P W++QR Sbjct: 181 AASGLGTLKSAAVEKIPGKGET---PVKVVIEAPELCPGFALRLVRGVKNGPSPKWLQQR 237 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR ISALVDITNYV+ DRG P HVFDA +++ L VRRA GEK++ALD +EY L Sbjct: 238 LIAIGLRPISALVDITNYVTFDRGRPLHVFDARKVAGNLVVRRAHDGEKVMALDGREYTL 297 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 +PD IA D ++SIAG++GG+H+GCD+NTTDVL+E ALWDPI AR+G+ LGIITD+R Sbjct: 298 TPDMCAIADDNGVESIAGVMGGEHSGCDENTTDVLIESALWDPITTARTGRTLGIITDAR 357 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD + M+P ++ L+L LCGG ++ + +KP+ + F SEV RL+GI Sbjct: 358 YRFERGVDPEFMVPGVELATRLVLDLCGGEPAETEVVGYAGHKPKIVSFPISEVTRLTGI 417 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 +VP E+SL IL RLGF G + +V++PSWR DV+ KADLVEE++RI+GVD I +PL Sbjct: 418 EVPKEESLDILSRLGFKPQGSSEVVDVALPSWRPDVDGKADLVEEVMRIHGVDNIAPQPL 477 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 + + L+ Q RTR KR LA R MME V WSFI + + LFGGGQ L++ NPI Sbjct: 478 GAHDAVNSKILTTLQVRTRTAKRALAVRGMMEAVTWSFIPAKHAELFGGGQTALKLANPI 537 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 +ADMS+MR SLLPGL+ A RN D+ I D A+FEVS YE D + Q+ +AAG+R+G++ Sbjct: 538 AADMSDMRPSLLPGLIAAAQRNADKGIGDVALFEVSGTYEGDGADQQRRVAAGVRRGTAK 597 Query: 598 IEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSGII 656 ++GSGR W+ S V +FDAKADA++ +E + ++ L+ E+G P+WYHPGRSG I Sbjct: 598 LDGSGRSWAGNS----GPVGVFDAKADAIAALEACGAPVERLQIEAGGPAWYHPGRSGTI 653 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + VLG FGEFHP ++ +S P+CGFEV++D++P + K TKTK + LS+ V Sbjct: 654 KLGPKTVLGTFGEFHPKTMEGLDVSGPLCGFEVFVDAVPEPKAKPTKTKPKLELSAFQAV 713 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 KRD AF+VD+ + AGTLV D +LI V+VFD+F+G SLG KKS+AI+V IQP++ Sbjct: 714 KRDFAFVVDKAVEAGTLVRAALAADKKLITAVSVFDIFEGASLGADKKSIAIEVSIQPVE 773 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D+D L R+VENV K+T VLR Sbjct: 774 KTLTDEDFEALAKRVVENVGKQTGGVLRG 802 >gi|49474907|ref|YP_032948.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella henselae str. Houston-1] gi|66773908|sp|Q6G5I2|SYFB_BARHE RecName: Full=Phenylalanyl-tRNA synthetase beta chain; AltName: Full=Phenylalanine--tRNA ligase beta chain; Short=PheRS gi|49237712|emb|CAF26901.1| Phenylalanyl-tRNA synthetase beta chain [Bartonella henselae str. Houston-1] Length = 804 Score = 883 bits (2281), Expect = 0.0, Method: Composition-based stats. Identities = 407/807 (50%), Positives = 551/807 (68%), Gaps = 8/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+TD SL++ICD LT+IGLEV+ VD+R L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETDASLDEICDKLTAIGLEVDHVDDRSYLKGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG + +QV+CGAPN R GL+GV A PG+ +P ++ ++V KIRGIES GMMC Sbjct: 61 LQILSVDTGADKPVQVICGAPNARAGLVGVLALPGTYVPGLDVTLSVGKIRGIESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S EL LS++ I+ELP D P+G + Y L DP+ID+ LTPNRSDC GVRGIA DL Sbjct: 121 SWAELELSNEHDGIIELPEDVPIGASFAVYAGLDDPVIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSL-CKGFAMCCVKGVRNNVAPNWMRQRL 238 A G+G+LKE+++ ++ L++ D S+L C GFA C V+ V+NN +P WM+QRL Sbjct: 181 ATGIGRLKELSLPQLGTTFETSLDVSLDFSQSALLCLGFAWCEVRNVQNNASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVDITNY+S D G P HVFDA +I L VR GE++ AL+ + Y+L Sbjct: 241 NAIGLRPINALVDITNYISFDLGRPLHVFDADKIKGNLRVRCGREGEQLQALNGKVYNLG 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 + VIA + + SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 VKDCVIADEEGVVSIAGIMGGERTSCDETTRRVIIESALWDAQSIAQTGRALGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD M L+ L+L LCGG S + I + R+I F SE+KRL+ ++ Sbjct: 361 RFERGVDPAFMETGLEIATELVLRLCGGEGSKMKIVGYQQPEIRQITFPLSEIKRLTYLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + E ++ IL +LGF G+ + V VP+WR D+ KADLVEE++RIYG+D+IK PL Sbjct: 421 IEHEQTMTILTQLGFDSEGQGNVVVVKVPTWRPDIVGKADLVEEVMRIYGLDKIKPIPLE 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 L++ Q R+R + LA R M E V WSFIS++Q++ FGGGQ +L+++NPIS Sbjct: 481 SFMEVKDPVLTVSQLRSRITRFALAGRGMRETVTWSFISEKQALAFGGGQAQLKLVNPIS 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS MR SLLPGLL A RN DR DFA+FEVS++YE+DTP+ Q +A GIR+G+ Sbjct: 541 ADMSVMRPSLLPGLLVAAQRNADRGFPDFALFEVSNIYEDDTPDKQHRVAGGIRRGTEQF 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIK 657 G+GR W+ R VD+FDAKADAL+V+E + ++ E GAP WYHPGRSG+IK Sbjct: 601 GGAGRFWNGN----ARAVDVFDAKADALAVLEACGLESGKVQIEVGAPDWYHPGRSGVIK 656 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 ++I+LG+FG FHP L+ +S P+CGFE++LD IP +KK TK++ + LSSL V+ Sbjct: 657 LGSKIILGFFGVFHPATLEKLDISGPLCGFEIFLDRIPEPKKKATKSRSPLKLSSLQMVR 716 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AF+VD+ + + +V D +LI V VFDVF+ SLGE KKSVAI+V +QP++ Sbjct: 717 RDFAFVVDKMVDSSLIVRAASGADKKLIHSVQVFDVFEDLSLGEEKKSVAIEVALQPIER 776 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T D+DI L ++VENV + T A LR Sbjct: 777 TLTDEDIEELALKLVENVTRMTGASLR 803 >gi|118589628|ref|ZP_01547033.1| phenylalanyl-tRNA synthetase beta subunit [Stappia aggregata IAM 12614] gi|118437714|gb|EAV44350.1| phenylalanyl-tRNA synthetase beta subunit [Stappia aggregata IAM 12614] Length = 805 Score = 881 bits (2276), Expect = 0.0, Method: Composition-based stats. Identities = 371/809 (45%), Positives = 528/809 (65%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLK+HL+TD SLE+I + LT IGLEVE+V NR + L PF I KVL E++P+ D Sbjct: 1 MKFTLSWLKEHLETDASLEEIVERLTLIGLEVEEVTNRADRLKPFKIAKVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ +QVVCGAPN R GL+GV PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGEGDPVQVVCGAPNARAGLVGVLGKPGDYVPGLDVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LS++ I++LP DAPVG +++ L +P+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSNEHDGIIDLPADAPVGMAYAEWAGLDEPVIEIGLTPNRPDCTGVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLGKLKE + + P+++ D +CK F + VKGV+N +P W++ R Sbjct: 181 AAAGLGKLKERSNEQVRGTFPCPVDVTLDFGHTKPMCKAFGLRLVKGVKNGPSPKWLQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ LVD+TNY++ D+G P HVFDA ++ L VRR GE I L+ + Y++ Sbjct: 241 LTAIGLRPINTLVDMTNYITFDQGRPLHVFDADKVHGNLVVRRGKPGETIDGLNGKTYEI 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VI+ D ++S+ GI+GG+ +GC + T +VL+E ALWD +IA +G+ LG+ TD+R Sbjct: 301 DDTVCVISDDNGVESLGGILGGEPSGCTEETVNVLIESALWDEDDIAATGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L++ ++L LCGG AS+ A ++ + I F SE+KRLSG+ Sbjct: 361 YRFERGVDPDYMMPGLEYATRMVLELCGGEASETVQAGSVPETSKIIEFPYSEIKRLSGV 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 DV ++ L+ LGF V G D +V+ PSWR D+E KADLVEE++RI G+D++ PL Sbjct: 421 DVQPAEANVTLKSLGFWVSGSGDTVKVAAPSWRPDIEGKADLVEEVVRIIGLDRVPFTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P T ++ L+ Q R +R LA+R E V WSFI+K+ + LFGGG L + NPI Sbjct: 481 PRTGTVGQKVLTTGQIRRNKARRALAARGFNEAVTWSFIAKDHAELFGGGSAALALANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S +MS+MR SLLPGLL A RN DR + A+FEV V+ENDTPEGQK +A G+R+GS+ Sbjct: 541 STEMSDMRPSLLPGLLVAAQRNADRGYGNVALFEVGQVFENDTPEGQKMVATGVRRGSAK 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 ++G+GR WS S+ VD+FD ++ +D L + AP+ +HPGRSG + Sbjct: 601 LQGAGRHWSGVSQT----VDVFDAKADAEAALAAIGAPVDKLMVSADAPATFHPGRSGCL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + VL FGE HP L + P+ FE+YLD++P + K ++K +++S L PV Sbjct: 657 KLGPKNVLAVFGEIHPRTLQMLDIEGPLIAFEIYLDALPEPKGKGGRSKGALNVSGLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF++ + + A L+ + D+ LI DVT+FD+++G+ + EG+KSVAI V +QP + Sbjct: 717 QRDFAFLLGKDVSAEALLKAARGADKTLISDVTLFDIYEGQGVPEGQKSVAIDVTMQPRQ 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +I+ NV K T LR Sbjct: 777 KTLTDEEIDAVAKKIIANVEKATGGTLRG 805 >gi|254503425|ref|ZP_05115576.1| phenylalanyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] gi|222439496|gb|EEE46175.1| phenylalanyl-tRNA synthetase, beta subunit [Labrenzia alexandrii DFL-11] Length = 805 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 378/809 (46%), Positives = 525/809 (64%), Gaps = 9/809 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKD+LDTD SLE I D L IGLEVE+V NR + L PF I KVL E++P+ D Sbjct: 1 MKFTLSWLKDYLDTDASLEDILDRLNMIGLEVEEVTNRADRLKPFKIAKVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG + +QVVCGAPN R GL+GV PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGDGEPVQVVCGAPNARAGLVGVLGKPGDYVPGLDVTLSVGKIRDVESFGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 CSE+EL LSD+ I++LP DAPVG +++ L +P+I++ LTPNR DC GV GIA DL Sbjct: 121 CSERELELSDEHDGIIDLPDDAPVGVNYAEWAGLDEPVIEIGLTPNRPDCTGVYGIARDL 180 Query: 179 VAAGLGKLKEINISCPLSSESIPLEIKFDLDDSS-LCKGFAMCCVKGVRNNVAPNWMRQR 237 AAGLGKLKE + + P+++KFD D+ +CK F + VKGV+N +P W++ R Sbjct: 181 AAAGLGKLKERSHEQIRGAYPCPVDVKFDFGDTKPMCKAFGLRMVKGVKNGPSPQWLQDR 240 Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDL 297 L A+GLR I+ LVDITNY++ D+G P HVFDA ++ L VRR +GEKI L+ + YD+ Sbjct: 241 LTAIGLRPINILVDITNYITFDQGRPLHVFDADKVHGNLVVRRGQAGEKIDGLNAKSYDV 300 Query: 298 SPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSR 357 VIA D ++S+ GI+GG+ +GC ++T +VL+E ALWD IA +G+ LG+ TD+R Sbjct: 301 DGTVCVIADDNGVESLGGILGGEPSGCTEDTANVLIESALWDEDGIAATGRKLGVNTDAR 360 Query: 358 YRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGI 417 YRFERGVD M+P L++ L+L LCGG S+ +I I F SE+KRLSGI Sbjct: 361 YRFERGVDPDYMMPGLEYATRLVLDLCGGEPSETIRTGDIPDSTNIIDFPYSEIKRLSGI 420 Query: 418 DVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPL 477 D+ ++ L+ LGF + G D +V+ PSWR D+E KADLVEE+ RI G+D++ S PL Sbjct: 421 DLAPAEANVTLKALGFWISGSGDTVKVAAPSWRPDIEGKADLVEEVTRIVGLDRVPSTPL 480 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPI 537 P K L+ Q R +R LA+R E V WSFI KE +VLFGGG L + NPI Sbjct: 481 PRLGTVAKTVLTPGQIRRNKTRRALAARGFNESVTWSFIPKEHAVLFGGGNETLALANPI 540 Query: 538 SADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSG 597 S +MS+MR SLLPGL A RN DR D A+FE+ V+E+DTPEGQK +AAG+R+G++ Sbjct: 541 SPEMSDMRPSLLPGLFMAAQRNADRGYGDVALFEIGQVFESDTPEGQKIVAAGVRRGTAK 600 Query: 598 IEGSGRLWSDKSEERCRFVDLFD-AKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGII 656 + GSGR W S+ VD+FD ++ +D L+ + AP +HPGRSG + Sbjct: 601 LSGSGRHWFGTSDA----VDVFDAKADAEAALAAIGAPVDKLQVFTDAPDTFHPGRSGCL 656 Query: 657 KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 K + L FGE HP IL + P+ FE++LD++P + K ++K ++ S L PV Sbjct: 657 KLGPKNTLAVFGEVHPRILQKMDIEGPLVAFEIHLDALPQPKAKAGRSKGSLNASDLMPV 716 Query: 717 KRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLK 775 +RD AF+VD + A ++ + D+ LI+D+++FD+++G + EG+KSVAI V++QP K Sbjct: 717 RRDFAFLVDSAVTADKILKAARGADKSLIEDISLFDIYEGTGVPEGQKSVAIDVVLQPRK 776 Query: 776 DTFRDDDIRILMDRIVENVVKKTNAVLRS 804 T D++I + +++ NV K T LR Sbjct: 777 KTLTDEEIDAVSKKVIANVEKATGGTLRG 805 >gi|254474303|ref|ZP_05087693.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] gi|211956677|gb|EEA91887.1| phenylalanyl-tRNA synthetase, beta subunit [Pseudovibrio sp. JE062] Length = 807 Score = 880 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 384/811 (47%), Positives = 535/811 (65%), Gaps = 11/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD-NREALSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHL+TD SL++I + LT IGLEVE++ + L F I +VL E++P+ D Sbjct: 1 MKFTLSWLKDHLETDASLDEIVERLTLIGLEVEEITNPADRLGTFKIARVLEAEQHPNAD 60 Query: 60 -CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMM 118 +L++DTG+ +QVVCGAPN R GL+GV+A PG +P ++ ++V KIR +ES GMM Sbjct: 61 RLRVLKVDTGEGDPLQVVCGAPNARKGLVGVFAKPGDYVPGLDVTLSVGKIRDVESYGMM 120 Query: 119 CSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDL 178 SE+EL LSD+ I++LP DAPVG +Y L DP+I++ LTPNRSDC V GIA DL Sbjct: 121 ASERELELSDEHDGIIDLPEDAPVGVPYVEYAGLDDPVIEIGLTPNRSDCASVFGIARDL 180 Query: 179 VAAGLGKLKEI-NISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQ 236 A+GLG LK S + L++ DL D C F V+G++N +P WM++ Sbjct: 181 AASGLGTLKTPQKTQINAHSNANDLKVVLDLGDSPEHCPAFGYRVVRGIKNGPSPKWMQK 240 Query: 237 RLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYD 296 RL A+GLR I+ALVDITNY++ D+G P HVFDA ++S LT+R +GE+++ LD + Y Sbjct: 241 RLVAIGLRPINALVDITNYMTFDQGRPLHVFDADKVSGNLTIRHGKTGEELVGLDGKTYS 300 Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356 + VVI+ D ++S+ GI+GG+ GCD+NT +V++E ALWDP+NIARSG+ LG+ TD+ Sbjct: 301 VDESVVVISDDNGLESLGGIMGGESTGCDENTANVVIESALWDPLNIARSGRKLGVSTDA 360 Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLS 415 RYRFERGVD M+ L+ +++ LCGG ASD + + + R I F SEVKRLS Sbjct: 361 RYRFERGVDPAYMVEGLEVATKMVMDLCGGGEASDTHVVGEVPQEERIIDFPLSEVKRLS 420 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G++V + IL LGF V G D +VS PSWR DV KADLVEE++RI G+D++ + Sbjct: 421 GLEVSHGEIKAILSLLGFWVAGNGDVVKVSPPSWRPDVHGKADLVEEVMRIVGIDKVPTA 480 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 LP + ++ L++ Q R +R LA+R M E V WSFI K + FGGG L + N Sbjct: 481 TLPRMEPVSQKVLTVSQIRRSNARRALAARGMDEAVLWSFIPKAHAEHFGGGNPVLSLAN 540 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGS 595 PIS+DMS+MR SLLPGLL A RN DR AD A+FEV V+END+ +GQK + AGIR+G+ Sbjct: 541 PISSDMSDMRPSLLPGLLTAAQRNADRGYADVALFEVGQVFENDSEKGQKMVIAGIRRGT 600 Query: 596 SGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVS-LDSLRFESGAPSWYHPGRSG 654 + GSGR WS +E +D+FDAKADA +V++ + + +L + APS+YHPGRSG Sbjct: 601 AKPTGSGRHWSGNAEN----IDVFDAKADAGAVLQSIGAQVGNLMVFTDAPSYYHPGRSG 656 Query: 655 IIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLH 714 +K + L YFGE HP L+ + P+ FEV++D++P +KK TK+K ++ + L Sbjct: 657 ALKMGPKNTLAYFGEIHPKTLEALDIEGPLVAFEVFIDAVPQPKKKATKSKGALNAADLM 716 Query: 715 PVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVLIQP 773 PVKRD AF+VD P L+ K D+ LI +V +FD+++G+ + EG++S+AI V +QP Sbjct: 717 PVKRDFAFLVDSSTPVEKLLKAAKGADKALITNVNLFDIYEGQGVPEGQRSLAIDVTLQP 776 Query: 774 LKDTFRDDDIRILMDRIVENVVKKTNAVLRS 804 K T D+DI + ++IV +V K T LR Sbjct: 777 TKKTLTDEDIEAVSNKIVASVQKATGGTLRG 807 >gi|240849764|ref|YP_002971152.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] gi|240266887|gb|ACS50475.1| phenylalanyl-tRNA synthetase subunit beta [Bartonella grahamii as4aup] Length = 804 Score = 879 bits (2271), Expect = 0.0, Method: Composition-based stats. Identities = 407/807 (50%), Positives = 546/807 (67%), Gaps = 8/807 (0%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD- 59 MKFTLSWLKDHL+T SL++IC+ LT+IGLEV+ VD+R +L F I KVL+ ++PD D Sbjct: 1 MKFTLSWLKDHLETSASLDEICEKLTAIGLEVDYVDDRSSLKGFVIAKVLTAIKHPDADK 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 IL +DTG +QVVCGAPN R GL+GV A PG+ I ++ ++V KIRG+ES GMMC Sbjct: 61 LQILSVDTGTSTPVQVVCGAPNARAGLVGVLALPGTYISGLDVTLSVGKIRGVESFGMMC 120 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S+ EL LS++ I+ELP DAP+G + Y L DPIID+ LTPNRSDC GVRGIA DL Sbjct: 121 SQAELELSNEHDGIIELPEDAPIGDSFATYAGLDDPIIDIGLTPNRSDCTGVRGIARDLA 180 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDL-DDSSLCKGFAMCCVKGVRNNVAPNWMRQRL 238 AAG+GKLKE+++S S PL++ D DSSLC GFA V+ V+N +P WM+QRL Sbjct: 181 AAGMGKLKELSLSKFEPSFKTPLDVSLDFSQDSSLCLGFAWREVRNVQNGASPQWMQQRL 240 Query: 239 KAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLS 298 A+GLR I+ALVD+TNY+S D G P HVFDA +I L VR A GE++ AL+ + Y L Sbjct: 241 NAIGLRPINALVDMTNYISFDLGRPLHVFDADKIKGNLCVRCAREGEQLQALNGKIYHLG 300 Query: 299 PDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRY 358 N VIA + I SIAGI+GG+ CD+ T V++E ALWD +IA++G+ LG+I+D+RY Sbjct: 301 AKNCVIADEEGIVSIAGIMGGERTSCDETTHRVIIESALWDAQSIAQTGRALGLISDARY 360 Query: 359 RFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGID 418 RFERGVD + L+ L+L LCGG S I + ++I F SE+KRL+ ++ Sbjct: 361 RFERGVDPAFIETGLEIATELVLRLCGGEVSKKRIVGYQQQEIKQIAFPFSEIKRLTNLE 420 Query: 419 VPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSEPLP 478 + E + IL +LGF V G+ D V VPSWR D+ KADLVEE++RIYG+D+IK PL Sbjct: 421 IDPEKVISILTKLGFFVEGKGDVVTVKVPSWRPDIMGKADLVEEVMRIYGLDKIKPIPLE 480 Query: 479 LTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILNPIS 538 E + L+ Q R+R + L R M E V WSFIS+ Q++ FGGGQ EL+++NPI+ Sbjct: 481 NFAEEKDQILTCAQIRSRTTRLALVQRGMKEAVTWSFISENQALAFGGGQEELKLVNPIA 540 Query: 539 ADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGI 598 ADMS MR SLLPGL+ A RN DR +D A+FEVS++YE DTP+ Q + +GIR+G+ Sbjct: 541 ADMSMMRPSLLPGLIMAAQRNADRGFSDLALFEVSNIYEGDTPDKQHRVVSGIRRGTEQF 600 Query: 599 EGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIK 657 +G+GR W+ VD+FDAKADAL+++E + + ++ E GAP WYHPGRSG IK Sbjct: 601 KGAGRFWNGN----ATVVDVFDAKADALAILEACDMDVGKVQIEVGAPDWYHPGRSGAIK 656 Query: 658 TSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPVK 717 ++I+LG+FG FHP L+ +S P+CGFE++LD IP S+KK TK++ + LS V+ Sbjct: 657 LGSKIILGFFGVFHPATLEKLDVSGPLCGFEIFLDRIPESKKKTTKSRPPLKLSPFQMVR 716 Query: 718 RDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQVLIQPLKD 776 RD AFI D+ + + ++ D +LI V VFD+F+ S GE KKSVAI+V IQP++ Sbjct: 717 RDFAFIADKTVASSLIIRAASGADKKLIHSVQVFDIFEDLSFGEDKKSVAIEVTIQPIER 776 Query: 777 TFRDDDIRILMDRIVENVVKKTNAVLR 803 T D+D+ L +IV+NV K T A LR Sbjct: 777 TLTDEDLEKLALKIVDNVTKMTGAYLR 803 >gi|220925394|ref|YP_002500696.1| phenylalanyl-tRNA synthetase subunit beta [Methylobacterium nodulans ORS 2060] gi|219950001|gb|ACL60393.1| phenylalanyl-tRNA synthetase, beta subunit [Methylobacterium nodulans ORS 2060] Length = 808 Score = 877 bits (2266), Expect = 0.0, Method: Composition-based stats. Identities = 388/811 (47%), Positives = 534/811 (65%), Gaps = 12/811 (1%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREA-LSPFTIVKVLSVERNPDLD 59 MKFTLSWLKDHLDTD SLE I +TLT IGLEVE+V+++ A L+ + I V++ E++P+ D Sbjct: 1 MKFTLSWLKDHLDTDASLETIVETLTRIGLEVERVEDKAADLAAYRIAAVITAEQHPNAD 60 Query: 60 -CAILRIDTGKHQ-EIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117 + +D G +QVVCGAPN R G+ V+APPG+ +P N+ ++V IRG+ES GM Sbjct: 61 RLRVCTVDPGDGTAPVQVVCGAPNARAGMRSVFAPPGTYVPGKNITLSVGTIRGVESRGM 120 Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177 +CS EL LS+D I++LP DAPVG + Y L DP+I+++LTPNR DC GV GIA D Sbjct: 121 LCSGAELGLSEDHDGILDLPADAPVGQPYAAYAGLDDPVIEINLTPNRPDCTGVSGIARD 180 Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLD--DSSLCKGFAMCCVKGVRNNVAPNWMR 235