RPSBLAST alignment for GI: 254780316 and conserved domain: TIGR00472

>gnl|CDD|161895 TIGR00472, pheT_bact, phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial. Every known example of the phenylalanyl-tRNA synthetase, except the monomeric form of mitochondrial, is an alpha 2 beta 2 heterotetramer. The beta subunits break into two subfamilies that are considerably different in sequence, length, and pattern of gaps. This model represents the subfamily that includes the beta subunit from Bacteria other than spirochetes, as well as a chloroplast-encoded form from Porphyra purpurea. The chloroplast-derived sequence is considerably shorter at the amino end, however. Length = 798
 Score =  648 bits (1674), Expect = 0.0
 Identities = 297/814 (36%), Positives = 470/814 (57%), Gaps = 27/814 (3%)

Query: 1   MKFTLSWLKDHLD-TDVSLEKICDTLTSIGLEVEKVDN-REALSPFTIVKVLSVERNPDL 58
           MK +L WL++++  +++  E+I + LTSIGLEVE V    + L    + KVL VE +P+ 
Sbjct: 1   MKISLKWLREYVPLSEIDNEEIAEALTSIGLEVEAVIPFSKPLKGVVVGKVLEVEPHPNA 60

Query: 59  D-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGM 117
           D   + ++D G+ + +Q+VCGAPNV  G     A PG+ +P N + +   K+RG+ES GM
Sbjct: 61  DKLKVCKVDIGEKEMLQIVCGAPNVEAGKKVAVALPGAKLP-NGLKIKKSKLRGVESEGM 119

Query: 118 MCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALD 177
           +CSE EL L + S  I+ L  DAP+G  +++YL L D II+VS+TPNR DC+ + GIA +
Sbjct: 120 LCSEDELGLDEKSDGIIVLDEDAPLGTDIAEYLGLDDDIIEVSITPNRGDCLSILGIARE 179

Query: 178 LVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQR 237
           L A     L+      P ++E+I    K +++D  +C  +    +KGV+   +P W+++R
Sbjct: 180 LAALFDLPLETPVPFEPETTETIDEGFKIEIEDPEVCPFYLGRVIKGVKVKPSPLWLKER 239

Query: 238 LKAVGLRSISALVDITNYVSLDRGYPSHVFDASRIS-DVLTVRRACSGEKILALDNQEYD 296
           L+  G+R I+ +VDITNYV L+ G P H FDA +I    + VR A  GE    LD +E +
Sbjct: 240 LRRSGIRPINNIVDITNYVMLELGQPLHAFDADKIEGSNIEVRSAKEGESFTTLDGKERE 299

Query: 297 LSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDS 356
           L   ++VIA D +  +IAG++GGK +G  D TT++ +E A ++P  I ++ + LGI TDS
Sbjct: 300 LKKGDLVIADDKKPLAIAGVMGGKESGVTDTTTNIFLESAYFNPERIRKTARRLGISTDS 359

Query: 357 RYRFERGVDLQGMIPVLKHIVSLILSLCGG-TASDICIARNITYKPRKIVFMNSEVKRLS 415
            YRFERGVD +     L   ++LIL + GG   S +        K +KI     ++ ++ 
Sbjct: 360 SYRFERGVDPELTELALDRALNLILEIFGGEVISVVSDVYKEKAKEKKISLRIKKLNKIL 419

Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475
           GI +  E+   IL+RLGF V  + D +EV+VPS+R D+  + DL+EEI RIYG D I +E
Sbjct: 420 GISLSDEEVRDILKRLGFKVEKQKDGWEVTVPSYRHDITIEEDLIEEIARIYGYDNIPAE 479

Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEI 533
           PL ++   +K N        R ++ +L    + EV+ +S +S E++  F   + E  +EI
Sbjct: 480 PLSVSSKLNKNN--ENYLLLRKLRTLLVGLGLNEVITYSLVSSEKAEKFNFPKLENLVEI 537

Query: 534 LNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND--TPEGQKYMAAGI 591
            NP+S + S +RTSLLP LL+    N +R   D  IFE+  V+  D    + Q  +A  I
Sbjct: 538 KNPLSNERSVLRTSLLPSLLEVLAYNQNRKNKDVKIFEIGKVFAKDGLGVKEQLRLAILI 597

Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHP 650
               SG E +   W+ K E+    VD +D K D  S++E   +S D     +      HP
Sbjct: 598 ----SG-EKNPSSWNHKEEK----VDFYDLKGDVESLLELLGLSDDVYFKNTAENEELHP 648

Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710
           G+S  I    + + G+ GE HP I   + L  P    E+ LD +  S KK  K +    +
Sbjct: 649 GQSATIYLKGKKI-GFIGELHPEIAKKYDLKEPTFVAELDLDRLLESLKKVPKYRP---I 704

Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVD-RLIDDVTVFDVFQGKSLGEGKKSVAIQV 769
           S    V RD++F+V + +PA  ++ +IK     L+++V +FDV++GK++GEGKKS+A+++
Sbjct: 705 SKFPAVTRDISFLVPKDVPANEIIKLIKKSGLELLEEVELFDVYEGKNIGEGKKSLALRL 764

Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803
           +++  + T  D++I  ++++++  + +K  A LR
Sbjct: 765 VLRDKERTLTDEEINKIVEKVLNLLKEKLGAELR 798