RPSBLAST alignment of GI: 254780316 and protein with PDBid: 1rqg

>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722

 Score = 39.1 bits (90), Expect = 0.004
 Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 34/121 (28%)

Query: 34  KVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCG-----APNVRVGLL 87
           K+D R       + K++ V+ +P+ D   ++++D G      +V G      P   +   
Sbjct: 625 KLDLR-------VGKIIEVKDHPNADKLYVVKVDLGDEVR-TLVAGLKKYYKPEELLNRY 676

Query: 88  GVWAPPGSCIPENNMIVNV--RKIRGIESTGM-MCSEKELMLSDDSASIMELPIDAPVGG 144
            V            ++ N+  +K+RGI S GM + ++       +  +++    +  +G 
Sbjct: 677 VV------------VVANLEPKKLRGIGSQGMLLAADD-----GERVALLMPDKEVKLGA 719

Query: 145 R 145
           +
Sbjct: 720 K 720