RPS-BLAST 2.2.22 [Sep-27-2009] Database: pdb70 24,244 sequences; 5,693,230 total letters Searching..................................................done Query= gi|254780316|ref|YP_003064729.1| phenylalanyl-tRNA synthetase subunit beta [Candidatus Liberibacter asiaticus str. psy62] (805 letters) >2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* Length = 795 Score = 478 bits (1231), Expect = e-135 Identities = 222/813 (27%), Positives = 398/813 (48%), Gaps = 29/813 (3%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M + WLKD++D V +E + + +T G+EV+ + + + + + + S E+ Sbjct: 1 MLISNEWLKDYVDAGVKVEDLAERITRTGIEVDNMIDYSKDIKNLVVGYIQSKEKGSG-- 58 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 I ++D G+ + +Q+VCGAPNV G + A G +P + + K+RG S GM+C Sbjct: 59 -NICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKVGGRLP-GGIKIKRAKLRGERSEGMIC 116 Query: 120 SEKELMLSDDSAS------IMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRG 173 S +E+ +S + I P + G L L+D +++ LTPNR+D + + G Sbjct: 117 SLQEIGISSNVVPKAYENGIFVFPTEVEPGTDALTALYLNDQVMEFDLTPNRADALSMVG 176 Query: 174 IALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNW 233 A ++ A ++ + +SES E+ +D+ ++ VK V +P W Sbjct: 177 TAYEVAALYQTEMTKPETQSNETSESATNELSVTIDNPEKVPYYSARVVKNVSIEPSPIW 236 Query: 234 MRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVL-TVRRACSGEKILALDN 292 ++ RL G+R I+ +VDI+NYV L+ G P H+FD I VR+A E + LDN Sbjct: 237 VQARLIKAGIRPINNVVDISNYVLLEYGQPLHMFDQDHIGSKEIVVRQAKDEETMTTLDN 296 Query: 293 QEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGI 352 E L ++VI++ ++AG++GG + + TT+V++E A++DP++I + + L + Sbjct: 297 NERKLVDTDIVISNGQEPIALAGVMGGDFSEVTEQTTNVVIEGAIFDPVSIRHTSRRLNL 356 Query: 353 ITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIAR-NITYKPRKIVFMNSEV 411 +++ RFE+G+ + + + L+ L G ++ ++ I +V Sbjct: 357 RSEASSRFEKGIATEFVDEAVDRACYLLQELASGEVLQDRVSSGDLGSFVTPIDITAEKV 416 Query: 412 KRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQ 471 + G ++ ++ I +LGF + + V+VPS R+D+ K DL+EE+ RIYG D+ Sbjct: 417 NKTIGFNLSNDEIQSIFRQLGFETTLKGETLTVNVPSRRKDITIKEDLIEEVARIYGYDE 476 Query: 472 IKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQREL 531 I S LP+ L+ +Q +TR +K L + + + +S +SK+ + F +R Sbjct: 477 IPSS-LPVFGEVTSGELTDRQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPT 535 Query: 532 -EILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAAG 590 +L P+S + +R SLLP L++AT NV R D ++E+ V+ + Sbjct: 536 ISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRLYEIGRVFFGNGEGELPDEVEY 595 Query: 591 IRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHP 650 + SGI + + ++ +D F AK V E +++G HP Sbjct: 596 L----SGILTGEYVVNAWQGKKEE-IDFFIAKGVVDRVAEKLN--LEFSYKAGKIEGLHP 648 Query: 651 GRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHL 710 GR+ I+ + + G+ GE HP + L FE+ D++ +++ Sbjct: 649 GRTAIVSLEGQDI-GFIGELHPQVAADNDL-KRTYVFELNYDAMMQVAVGYINYEQI--- 703 Query: 711 SSLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQV 769 V RD+A V+ +P+ L II N ++ VFDV++G+ L +GKKSVAI++ Sbjct: 704 PKFPGVTRDIALEVNHDVPSSELKQIIHNNGEDILQSTLVFDVYEGEHLEKGKKSVAIRL 763 Query: 770 LIQPLKDTFRDDDIRILMDRIVENVVKKTNAVL 802 +DT D+ + + D+I+E ++ A + Sbjct: 764 NYLDTEDTLTDERVSKIHDKILEA-LQAEGATI 795 >1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 2iy5_B* Length = 785 Score = 471 bits (1212), Expect = e-133 Identities = 227/813 (27%), Positives = 371/813 (45%), Gaps = 43/813 (5%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNR-EALSPFTIVKVLSVERNPDLD 59 M+ SWLK ++ S E + + L +G E ++++ +VL P Sbjct: 1 MRVPFSWLKAYVPELESPEVLEERLAGLGFETDRIERVFPIPRGVVFARVLEAHPIPGTR 60 Query: 60 CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMC 119 L +D G+ ++VV GA N R G+ A PG+ +P V R I+G+ S GM Sbjct: 61 LKRLVLDAGR--TVEVVSGAENARKGIGVALALPGTELPGLGQKVGERVIQGVRSFGMAL 118 Query: 120 SEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSDCIGVRGIALDLV 179 S +EL + + ++E P DA G + ++D+ +TPNR D +G+ G+A DL Sbjct: 119 SPRELGVGEYGGGLLEFPEDALPPGTPLSEAWPEEVVLDLEVTPNRPDALGLLGLARDLH 178 Query: 180 AAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLK 239 A G ++ E++PL ++D F + G+R +P WM++ L Sbjct: 179 ALGYALVEPEAALKA---EALPLPFALKVEDPEGAPHFTLGYAFGLRVAPSPLWMQRALF 235 Query: 240 AVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDNQEYDLSP 299 A G+R I+ +VD+TNYV L+R P H FD + + + VRRA GE++ LD E L P Sbjct: 236 AAGMRPINNVVDVTNYVMLERAQPMHAFDLRFVGEGIAVRRAREGERLKTLDGVERTLHP 295 Query: 300 DNVVIA----SDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITD 355 +++VIA + +AG++GG + ++T + +EVA +DP++I ++ + G+ T+ Sbjct: 296 EDLVIAGWRGEESFPLGLAGVMGGAESEVREDTEAIALEVACFDPVSIRKTARRHGLRTE 355 Query: 356 SRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS 415 + +RFERGVD G +P + +SL+ +L G ++ + P I F RL Sbjct: 356 ASHRFERGVDPLGQVPAQRRALSLLQALAGARVAEALLEAGSPKPPEAIPFRPEYANRLL 415 Query: 416 GIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQDVEEKADLVEEILRIYGVDQIKSE 475 G P + + IL+RLG V GE + V+ PS R D+ + DLVEE+ RI G + I Sbjct: 416 GTSYPEAEQIAILKRLGCRVEGEGPTYRVTPPSHRLDLRLEEDLVEEVARIQGYETIPLA 475 Query: 476 PLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRELEILN 535 D R + + + ++ VL+ EV +SF+ E + F L +LN Sbjct: 476 LPAFFPAPDNRGVEAPYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRLDPPRLLLLN 535 Query: 536 PISADMSNMRTSLLPGLLKATGRNVDR----AIADFAIFEVSHVYENDTPEGQKYMAAGI 591 P++ + + +RT L PGL++ N+D F + V E G + Sbjct: 536 PLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLFEVGRVFREREETHLAGLLFGE--- 592 Query: 592 RKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPG 651 + R F K ++ + R E+ A + HPG Sbjct: 593 -------------GVGLPWAKERLSGYFLLKGYLEALFARLG--LAFRVEAQAFPFLHPG 637 Query: 652 RSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLS 711 SG + E V G+ G HP I L P+ FE+ L K S Sbjct: 638 VSGRVLVEGEEV-GFLGALHPEIAQELEL-PPVHLFELRLPLP-------DKPLAFQDPS 688 Query: 712 SLHPVKRDLAFIVDQHIPAGTLVNIIKNVDR-LIDDVTVFDVFQGKSLGEGKKSVAIQVL 770 RDLA +V P G + +++ ++ + +FD++QG L EG KS+A + Sbjct: 689 RHPAAFRDLAVVVPAPTPYGEVEALVREAAGPYLESLALFDLYQGPPLPEGHKSLAFHLR 748 Query: 771 IQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 + K T RD+++ + R+ E ++ LR Sbjct: 749 FRHPKRTLRDEEVEEAVSRVAEA-LRARGFGLR 780 >3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Length = 589 Score = 319 bits (818), Expect = 1e-87 Identities = 95/611 (15%), Positives = 202/611 (33%), Gaps = 63/611 (10%) Query: 108 KIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLTPNRSD 167 + E +C E L L + E I + G + + + + NR D Sbjct: 17 RTYTDEEFDELCFEFGLELDEI---TSEKEIISKEQGNVKAAGASDVVLYKIDVPANRYD 73 Query: 168 CIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRN 227 + + G+ L ++K + + ++ + + + ++ ++ Sbjct: 74 LLCLEGLVRGL-QVFKERIKAPVYK-RVMPDGKIQKLIITEETAKIRPFAVAAVLRNIKF 131 Query: 228 NVA----PNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHVFDASRISDVLTVRRACS 283 ++++L R ALV I + P + + Sbjct: 132 TKDRYDSFIELQEKLHQNICRKR-ALVAIGTHDLDTLSGPFTYTAKR--PSDIKFKPLNK 188 Query: 284 GEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVALWDPINI 343 ++ A + + +++ + I ++ V++ + P I Sbjct: 189 TKEYTACELMNIYKTDNHL-------KHYLHIIENKPLYPVIYDSNGVVLSM----PPII 237 Query: 344 ARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTAS---------DICIA 394 + + T + + G D VL IV++ C + + Sbjct: 238 NGDHSRITVNTRNIFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNGKSH 297 Query: 395 RNITYKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLG--FSVIGEYDKFEVSVPSWRQD 452 RK + + + GI E+ ++L R+ VIG+ ++ E+ +P R D Sbjct: 298 TFPELAYRKEMVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRAD 357 Query: 453 VEEKADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVN 512 + D+VE+ YG + I+ + ++ L T ++ +A+ E + Sbjct: 358 IIHACDIVEDAAIAYGYNNIQMTLPKTYTIANQFPL---NKLTELLRHDMAAAGFTEALT 414 Query: 513 WSFISKEQSVLFGG----GQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFA 568 ++ S+E G + + I NP +A+ RT+LLPGLLK N + Sbjct: 415 FALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPL-PLK 473 Query: 569 IFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV 628 +FE+S + D+ G+ ++ +K+ + Sbjct: 474 LFEISDIVIKDSNTDV---------GAKNYRHLCAVYYNKN------PGFEIIHGLLDRI 518 Query: 629 -----IEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNP 683 + P ++ + PGR I + V G G HP+++ F L+ P Sbjct: 519 MQLLDVPPGEDKGGYVIKASEGPAFFPGRCAEIFARGQSV-GKLGVLHPDVITKFELTMP 577 Query: 684 ICGFEVYLDSI 694 E+ + Sbjct: 578 CSSLEINIGPF 588 >2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 701 Score = 231 bits (589), Expect = 6e-61 Identities = 56/449 (12%), Positives = 138/449 (30%), Gaps = 53/449 (11%) Query: 350 LGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNS 409 G++ + F+R ++ + L + +Y K VF Sbjct: 11 SGLVPRGSHMFKREEIIEMANKDFEKAWIETKDLIKAKKINE------SYPRIKPVFG-- 62 Query: 410 EVKRLSGIDVPIEDSLRILERLGFSVIG------EYDKFEVSVPSW---RQDV-EEKADL 459 + ++ IE+ + R+GF E D ++ P Sbjct: 63 ---KTHPVNDTIENLRQAYLRMGFEEYINPVIVDERDIYKQFGPEAMAVLDRCFYLAGLP 119 Query: 460 VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKE 519 ++ + +V + + + + ++E+ N IS E Sbjct: 120 RPDVGLSDEKISQIEKLG--IKVSEHKESLQKILHGYKKGTLDGDDLVLEISNALEISSE 177 Query: 520 QSVLFGGGQRELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYEND 579 + + +R+ + G +++ F +F + + + Sbjct: 178 MGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRRE 237 Query: 580 TPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SL 638 E + ++ + + VD+ D KA A ++ F + Sbjct: 238 QKEDKSHLMTYHS-----ASC---AIAGEG------VDINDGKAIAEGLLSQFGFTNFKF 283 Query: 639 RFESGAPSWYHPGRSGII-----KTSAEIVLGYFGEFHPNILDFFGLSNPICGFEVYLDS 693 + +Y P + K + + FG + P L +G+ P+ + ++ Sbjct: 284 IPDEKKSKYYTPETQTEVYAYHPKLKEWLEVATFGVYSPVALSKYGIDVPVMNLGLGVER 343 Query: 694 IPISQKKRTKTKKVVHLS-SLHPV-KRDLAFIV--DQHIPAGTLVNIIKNVDRLID---- 745 + + +++V+ H + R++A +V D+ + ++ K + Sbjct: 344 LAMISGNFADVREMVYPQFYEHKLNDRNVASMVKLDKVPVMDEIYDLTKELIESCVKNKD 403 Query: 746 --DVTVFDVFQGKSLGEGKKSVAIQVLIQ 772 + + S G+ KK+V I + + Sbjct: 404 LKSPCELAIEKTFSFGKTKKNVKINIFEK 432 >2cxi_A Phenylalanyl-tRNA synthetase beta chain; aminoacyl-tRNA synthetase, ligase, structural genomics, NPPSFA; HET: MSE; 1.94A {Pyrococcus horikoshii OT3} Length = 348 Score = 191 bits (487), Expect = 4e-49 Identities = 61/377 (16%), Positives = 130/377 (34%), Gaps = 43/377 (11%) Query: 103 IVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSLT 162 +V K G S +E +D + +D + E + Sbjct: 3 KFDVSKSDLERLIGRSFSIEEW---EDLVLYAKCELD-------DVWEENGKVYFKLDSK 52 Query: 163 -PNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDDSSLCKGFAMCC 221 NR D G+A + LG K + + + + D + Sbjct: 53 DTNRPDLWSAEGVARQI-KWALGIEKGLPK---YEVKKSNVTVYVDEKLKDIRPYGVYAI 108 Query: 222 VKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLD-----RGYPSHVFDASRISDVL 276 V+G+R + S+S ++ + ++L R +FD +I + Sbjct: 109 VEGLR--------------LDEDSLSQMIQLQEKIALTFGRRRREVAIGIFDFDKIKPPI 154 Query: 277 TVRRACSGEKILALDNQEYDLSPDNVVIASDGRIQSIAGIIGGKHAGCDDNTTDVLVEVA 336 + A EK L +E + + GR + D+ +VL Sbjct: 155 YYKAAEKTEKFAPLGYKEEMTLEEILEKHEKGREYGHLIKDKQFYPLLIDSEGNVLS--- 211 Query: 337 LWDPINIARSGKNLGIITDSRYRFERGVDLQGMIPVLKHIVSLILSLCGGTASDICIARN 396 PI + + T + + G L+ ++ L +V+ + G S + ++ Sbjct: 212 -MPPIINSEFTGRVTTDTKNVFIDVTGWKLEKVMLALNVMVTALAERGGKIRSVRVVYKD 270 Query: 397 IT-----YKPRKIVFMNSEVKRLSGIDVPIEDSLRILERLGFSVIGEYDKFEVSVPSWRQ 451 P++ +++LSG+++ + +LE++ + V + ++ P++R Sbjct: 271 FEIETPDLTPKEFEVELDYIRKLSGLELNDGEIKELLEKMMYEVEISRGRAKLKYPAFRD 330 Query: 452 DVEEKADLVEEILRIYG 468 D+ D++E++L YG Sbjct: 331 DIMHARDILEDVLIAYG 347 Score = 29.7 bits (66), Expect = 2.9 Identities = 7/36 (19%), Positives = 15/36 (41%) Query: 1 MKFTLSWLKDHLDTDVSLEKICDTLTSIGLEVEKVD 36 + S L+ + S+E+ D + E++ V Sbjct: 4 FDVSKSDLERLIGRSFSIEEWEDLVLYAKCELDDVW 39 >3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* Length = 415 Score = 152 bits (385), Expect = 3e-37 Identities = 59/412 (14%), Positives = 115/412 (27%), Gaps = 74/412 (17%) Query: 457 ADLVEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQ----SRTRY-VKRVLASRAMMEVV 511 +VE + + Y D + RNL QQ + VK + + Sbjct: 12 GSVVELLGKSYPQDDHSNLT-RKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFG 70 Query: 512 NWSFISKEQSVLFGGGQRELEILN-------------PISADMSNMRTSLLPGLLKATGR 558 F + + + L +R Sbjct: 71 TPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHA 130 Query: 559 NVDRAIADFAIFEVSHVYENDTPEGQKY----------------MAAGIRKGSSGIEGSG 602 +D V VY D + Q Y + AGI+ G S Sbjct: 131 GLDA------FLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQ 184 Query: 603 RLWSDKSEE----RCRFVDLFDAKADALSVIEP-FVSLDSLRFESGAPSWYHPGRSGIIK 657 S +E + FD K ++ F +R+ + HP I Sbjct: 185 SSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEIN 244 Query: 658 TSAE-IVLGYFGEFHPNILDFFGLSNPI-CGFEVYLDSIPI------------------- 696 E + + G +++ G + I F + L+ + + Sbjct: 245 FHGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFL 304 Query: 697 ---SQKKRTKTKKVVHLSSLHPVKRDLAFIVD-QHIPAGTLVNIIKNVDR-LIDDVTVFD 751 + K LS V D++F + ++ ++++ + L++ V + D Sbjct: 305 KQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLID 364 Query: 752 VFQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIRILMDRIVENVVKKTNAVLR 803 F K S ++ + ++ T ++R + + E V+ R Sbjct: 365 KFVHP--KTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGR 414 >3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, beta subunit, structural genomics, PSI-2, protein structure initiative; HET: TAM; 2.44A {Porphyromonas gingivalis} Length = 213 Score = 137 bits (345), Expect = 1e-32 Identities = 41/212 (19%), Positives = 76/212 (35%), Gaps = 5/212 (2%) Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNM 544 N + V L E++N S + RE +E++NP+S +++ M Sbjct: 2 NADRRYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCM 61 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVY--ENDTPEGQKYMAAGIRKGSSGIEGSG 602 R +LL G L+ N+ R +FE Y + +AA GI G Sbjct: 62 RQTLLFGGLETLSHNLRRKHLSLYLFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICG 121 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEI 662 + + +F+ KA V+ A + + + S ++ Sbjct: 122 QRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIETGAYTLKTADNDLYASAMEVKTRSGKL 181 Query: 663 VLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 + G FG ++ F + P+ E+ D++ Sbjct: 182 L-GTFGTVSTELIKRFEIEQPVYFAELLWDAL 212 >3bu2_A Putative tRNA-binding protein; structural genomics, PSI-2, protein structure initiative; 2.70A {Staphylococcus saprophyticus subsp} Length = 199 Score = 100 bits (250), Expect = 1e-21 Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%) Query: 14 TDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQE 72 T+ ++ + + G + + F + V + +++PD D ++L +D + Sbjct: 65 TETLVQAFQKAIEAAGFTYKLDAD--FTPKFVVGYVETKDKHPDADKLSVLSVDVATE-K 121 Query: 73 IQVVCGAPNVRVGLLGVWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSD--DS 130 +Q+VCGAPNV G V A G+ +P + M++ ++RG+ S+GM+CS KEL L + Sbjct: 122 LQIVCGAPNVEAGQKVVVAKVGAVMP-SGMVIKDAELRGVASSGMICSMKELGLPNAPQE 180 Query: 131 ASIMELPIDAPVGGRLSD 148 IM L D VG + Sbjct: 181 KGIMVLSDDYTVGQSFFE 198 >3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 2.09A {Bacteroides fragilis} Length = 213 Score = 98.9 bits (245), Expect = 4e-21 Identities = 44/213 (20%), Positives = 81/213 (38%), Gaps = 7/213 (3%) Query: 487 NLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQSVLFGGGQRE--LEILNPISADMSNM 544 N V L E++N S + + +LNP+SAD++ M Sbjct: 2 NADKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCM 61 Query: 545 RTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPE--GQKYMAAGIRKGSSGIEGSG 602 R +LL G L++ N +R AD FE + Y D + +K +A G+ +G Sbjct: 62 RQTLLFGGLESIAHNANRKNADLKFFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTG 121 Query: 603 RLWSDKSEERCRFVDLFDAKADALSVIEPF-VSLDSLRFESGAPSWYHPGRSGIIKTSAE 661 ++ S+ +++ KA ++ + + L SL + + Y + K Sbjct: 122 KMVSNSWAHADENTSVYELKAYVENIFKRLGLDLHSLVVGNLSDDIYSTALTVNTK--GG 179 Query: 662 IVLGYFGEFHPNILDFFGLSNPICGFEVYLDSI 694 L FG +L F + N + ++ + Sbjct: 180 KRLATFGVVTKKMLKAFDVDNEVYYADLNWKEL 212 >2e8g_A Hypothetical protein PH0536; oligonucleotide/oligosaccharide-binding fold, alpha-helices bundle, structural genomics, NPPSFA; 1.70A {Pyrococcus horikoshii} Length = 241 Score = 91.2 bits (226), Expect = 9e-19 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 18/117 (15%) Query: 46 IVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIV 104 + +V+SV ++P D + ++ G+ + VV V+ G A Sbjct: 140 VGEVMSVGKHPSADRLLVTNVNIGERA-VTVVTNDLTVKEGNRVAVALLPP--------- 189 Query: 105 NVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDVSL 161 R GI S GM E +L + I LP P+ + L + ++ L Sbjct: 190 --RNFFGIVSEGMFLGAGEGVLKNVKGEIGGLPKGIPL-----EALNETRNAVEAFL 239 >1fl0_A Endothelial-monocyte activating polypeptide II; RNA-binding domain, OB-fold, tRNA synthetase complex, RNA binding protein; 1.50A {Homo sapiens} SCOP: b.40.4.4 PDB: 1e7z_A 1euj_A Length = 171 Score = 83.5 bits (206), Expect = 2e-16 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 29/176 (16%) Query: 30 LEVEKVDNREALSPFTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVGLLG 88 ++V ++D I +++ ++PD D + +D G+ VV G N Sbjct: 1 IDVSRLD-------LRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQM 53 Query: 89 VWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSD 148 + K+RG+ S M+ + I+ P + G R++ Sbjct: 54 QNRMVILL-----CNLKPAKMRGVLSQAMVMCASS----PEKIEILAPPNGSVPGDRITF 104 Query: 149 YLELSDPIIDV------------SLTPNRSDCIGVRGIALDLVAAGLGKLKEINIS 192 +P ++ L N +G+ ++ G+ + + ++ S Sbjct: 105 DAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNS 160 >2pff_B Fatty acid synthase subunit beta; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl reductase, beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 2006 Score = 71.5 bits (175), Expect = 7e-13 Identities = 88/580 (15%), Positives = 165/580 (28%), Gaps = 230/580 (39%) Query: 184 GKLKEINISCP--------------LSSESIPLEIKFDLDD--SS---LCKGFAMCCVKG 224 G L E + P P E F DD ++ L F Sbjct: 14 GSL-EHVLLVPTASFFIASQLQEQFNKILPEPTE-GFAADDEPTTPAELVGKFLGYVSSL 71 Query: 225 VRNNVAPNWMRQRLKAV---------GLRSISALVDITNYVSLDRGYPSHVFDASRISDV 275 V + Q L I AL L + + + + Sbjct: 72 VEPS-KVGQFDQVLNLCLTEFENCYLEGNDIHALA-----AKLLQENDTTLVKTKEL--- 122 Query: 276 LTVR---RACSGEKILALDNQEYDLSPDNVVI--ASDGRIQSIAGIIGGKHAGCDDNTTD 330 ++ A + + +D ++ + +G Q + I GG+ G D+ + Sbjct: 123 --IKNYITAR------IMAKRPFDKKSNSALFRAVGEGNAQ-LVAIFGGQ--GNTDDYFE 171 Query: 331 VLVEVALWD-------PINIARSGKNLGIIT----DSRYRFERGVDLQGMI------PVL 373 L + L+ + I S + L + D+ F +G+++ + P Sbjct: 172 ELRD--LYQTYHVLVGDL-IKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDK 228 Query: 374 KHIVS------LI--LSLCGGTASDICIARNITYKPRKIVFMNSEVKRLS-------GID 418 +++S LI + L + T P + + S L G+ Sbjct: 229 DYLLSIPISCPLIGVIQLAHYVVT--AKLLGFT--PGE---LRS---YLKGATGHSQGLV 278 Query: 419 VPI------------EDSLRILERLGFSVIG--EYDKFEVSV--PSWRQDVEEKADLVEE 462 + + + L F IG Y+ + + PS +D E E Sbjct: 279 TAVAIAETDSWESFFVSVRKAITVL-FF-IGVRCYEAYPNTSLPPSILEDSLENN----E 332 Query: 463 -----ILRIYGVDQIKSEPLPLTQVE---DKRNLSLQQSRTRYVKRVLASRAMMEVVNWS 514 +L I L QV+ +K N L + + V ++ + VV+ Sbjct: 333 GVPSPMLSISN--------LTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNL--VVSGP 382 Query: 515 FIS----------------KEQS-VLFGGGQRELEILN---PISA--------------- 539 S +QS + F +R+L+ N P+++ Sbjct: 383 PQSLYGLNLTLRKAKAPSGLDQSRIPFS--ERKLKFSNRFLPVASPFHSHLLVPASDLIN 440 Query: 540 -DM----------------------SNMR---TSLLPGLLKA-TGRNVD--RAIADFAIF 570 D+ S++R S+ ++ V F Sbjct: 441 KDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQ----F 496 Query: 571 EVSHVYENDTPEGQKYMAAGIRKGSSGI--------EGSG 602 + +H+ D G G+SG+ +G+G Sbjct: 497 KATHIL--DFGPG----------GASGLGVLTHRNKDGTG 524 Score = 67.3 bits (164), Expect = 1e-11 Identities = 106/700 (15%), Positives = 172/700 (24%), Gaps = 337/700 (48%) Query: 3 FTLSWLKD----HL--DTDVSLEKICDTLTS--------IGLEVEKVDNREALSPFTIVK 48 F S L++ L T+ D T+ +G V+ + ++ Sbjct: 28 FIASQLQEQFNKILPEPTEGFAAD--DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLN 85 Query: 49 VL--SVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVWAPPGSCIPENNMIV-- 104 + E L G +I + LL + + + ++ Sbjct: 86 LCLTEFENC------YLE---GN--DIHALAAK------LLQ---ENDTTLVKTKELIKN 125 Query: 105 --NVRKIRGIESTGMMCSEKELM--LSDDSASIMELPIDAPVGGR--LSDYL-ELSD--- 154 R + S L + + +A ++ A GG+ DY EL D Sbjct: 126 YITARIMAKRPFDKK--SNSALFRAVGEGNAQLV-----AIFGGQGNTDDYFEELRDLYQ 178 Query: 155 -------PIIDVS------LTPNRSDCIGVRGIALDLVA--------AGLGKLKEINISC 193 +I S L D V L+++ L I ISC Sbjct: 179 TYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC 238 Query: 194 PLSSESIPLEIKFDLDDSSLCKGFAMCC-VKG-----VRNN------------------V 229 PL I + L + + + G +R+ Sbjct: 239 PL----IGV--------IQLAH-YVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAE 285 Query: 230 APNW---MRQRLKAV------GLRSISALVDITNYVSLDRGYPSHVFDASRISD------ 274 +W KA+ G+R A YP+ S + D Sbjct: 286 TDSWESFFVSVRKAITVLFFIGVRCYEA-------------YPNTSLPPSILEDSLENNE 332 Query: 275 -----VLTVRRACSGEKI------------------LALDNQEYDLSPDNVVIASDGRIQ 311 +L++ + E++ ++L N N+V++ G Q Sbjct: 333 GVPSPMLSIS-NLTQEQVQDYVNKTNSHLPAGKQVEISLVN-----GAKNLVVS--GPPQ 384 Query: 312 SIAGIIGGKHAGCDDNTTDVLVEVALWDPINIARSGKNLGIITDSRYRFERGVDLQGMIP 371 S+ G+ N T L + K G+D Q IP Sbjct: 385 SLYGL----------NLT--LRKA------------KA-----------PSGLD-QSRIP 408 Query: 372 VLKHIVSLILSLCGGTASDICIARNITYKPRKIVFMNSEVKRLSGIDVPIEDSL------ 425 + RK+ F N R + P L Sbjct: 409 ---------------------------FSERKLKFSN----RFLPVASPFHSHLLVPASD 437 Query: 426 RILERLGFSVIGEYDKFEVS---VPSWR----QDV-EEKADLVEEILRIYGVDQIKSEPL 477 I + L + + F +P + D+ + E I VD I P Sbjct: 438 LINKDLVKNNV----SFNAKDIQIPVYDTFDGSDLRVLSGSISERI-----VDCIIRLP- 487 Query: 478 PLTQVEDKRNLSLQQSRTRYVKRVLASRAMMEVVNWSFISKEQS--------VLFG-GGQ 528 V W E + + FG GG Sbjct: 488 ---------------------------------VKW-----ETTTQFKATHILDFGPGG- 508 Query: 529 RELEILNPISADMSNMRTSLLPGLLKATGRNVD----RAI 564 GL T RN D R I Sbjct: 509 --------------------ASGLGVLTHRNKDGTGVRVI 528 Score = 65.0 bits (158), Expect = 7e-11 Identities = 87/542 (16%), Positives = 146/542 (26%), Gaps = 224/542 (41%) Query: 421 IEDSLRILERLGFSVIGEYDKFEVSVP----SWRQDVEEKADLVEEILRIYG--VDQIKS 474 +E L + F ++F +P + D +E E + + G + Sbjct: 16 LEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAAD-DEPTTPAELVGKFLGYVSSLV-- 72 Query: 475 EPLPLTQVEDKRNLSLQQSRTRY-----------------------VKRVLAS--RAMME 509 EP + Q + NL L + Y K ++ + A Sbjct: 73 EPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITAR-I 131 Query: 510 VVNWSFISKEQSVLF-----G--------GGQ-------RELEILNPISADMSNMRTSLL 549 + F K S LF G GGQ EL D+ L+ Sbjct: 132 MAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEEL-------RDLYQTYHVLV 184 Query: 550 PGLLKATGRNVDRAIADFAIFEVSHVY------------ENDTPEGQKYMAA-------- 589 L+K + + I + V+ ++TP + Y+ + Sbjct: 185 GDLIKFSAETLSELIRT--TLDAEKVFTQGLNILEWLENPSNTP-DKDYLLSIPISCPLI 241 Query: 590 GI--------------------R---KGSSG----------IEGSGRLWSDKSEERCRFV 616 G+ R KG++G I + W F Sbjct: 242 GVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAET-DSWES-------F- 292 Query: 617 DLFDAKADALSV----------------IEPFVSLDSLRFESGAPSWY----HPGRSGII 656 F + A++V + P + DSL G PS + + + Sbjct: 293 --FVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQ 350 Query: 657 KT----------SAEIVLGYFGEFHPNILDFFGLSNP---ICGFEVYLDS---------- 693 ++ + N +S P + G + L Sbjct: 351 DYVNKTNSHLPAGKQVEISLV-----NGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQS 405 Query: 694 -IPISQKKRTKTKKVVH--LSSLHPVKRDLAFIVDQHIP--AGTLVNIIKNVDRLIDDVT 748 IP S++K K + L PV F H D + D+ Sbjct: 406 RIPFSERK----LKFSNRFL----PVA--SPF----HSHLLVPA-------SDLINKDLV 444 Query: 749 VFDV-FQGKSLGEGKKSVAIQVLIQPLKDTFRDDDIR--------ILMDRIVENVVKKTN 799 +V F K + I P+ DTF D+R ++D I+ VK Sbjct: 445 KNNVSFNAKDI-------QI-----PVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWET 492 Query: 800 AV 801 Sbjct: 493 TT 494 Score = 49.6 bits (118), Expect = 3e-06 Identities = 62/342 (18%), Positives = 111/342 (32%), Gaps = 136/342 (39%) Query: 6 SWLKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVK------------VLSVE 53 SW + S+ K L IG+ + +L P +I++ +LS+ Sbjct: 288 SW--ESFFV--SVRKAITVLFFIGVRCYEAYPNTSLPP-SILEDSLENNEGVPSPMLSI- 341 Query: 54 RN---PDLDCAILRID-TGKH----QEIQV--VCGAPNVRVGLLGVWAPPGS-CIPENNM 102 N + ++ T H +++++ V GA N+ V G PP S + Sbjct: 342 SNLTQEQVQD---YVNKTNSHLPAGKQVEISLVNGAKNLVVS--G---PPQSLY----GL 389 Query: 103 IVNVRKIR---GIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDYLELSDPIIDV 159 + +RK + G++ + + SE++L S+ LP+ +P S L Sbjct: 390 NLTLRKAKAPSGLDQSRIPFSERKLKFSNRF-----LPVASPFH---SHLLV-------- 433 Query: 160 SLTPNRSDCIGVRGIALDLVAAGLGKLKEINISCPLSSESIPLEIKFDLDD--------- 210 A DL+ L + N+S IP+ +D D Sbjct: 434 --------------PASDLI---NKDLVKNNVSFNAKDIQIPV---YDTFDGSDLRVLSG 473 Query: 211 ---SSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISALVDITNYVSLDRGYPSHV- 266 + + V W ++ +H+ Sbjct: 474 SISERIVD--CIIR-----LPV--KW----ETTTQFKA------------------THIL 502 Query: 267 -FDASRISD--VLTVR-RACSGEK-ILA--LDNQEYDLSPDN 301 F S VLT R + +G + I+A LD +PD+ Sbjct: 503 DFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDI-----NPDD 539 Score = 37.6 bits (87), Expect = 0.011 Identities = 38/195 (19%), Positives = 82/195 (42%), Gaps = 51/195 (26%) Query: 120 SEKELM----LSDDSASIME------------LPIDAPVGGR-LSDYLELSDPIIDVSLT 162 SEK L+ + + ++ME +P DA G L +Y L+ + DV Sbjct: 1721 SEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALAS-LADVMSI 1779 Query: 163 PNRSDCIGVRGIALDLVAA--GLGK----LKEIN---ISCPLSSESIPLEIKFDLDDSSL 213 + + + RG+ + + LG+ + IN ++ S E++ ++ ++ Sbjct: 1780 ESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEAL----QYVVERVGK 1835 Query: 214 CKGFAMCCVKGVRNNVAPNWMRQRLKAVG-LRSISALVDITNYVSLDRGYPSHVFDASRI 272 G+ V+ V NV Q+ A G LR++ + ++ N++ L + Sbjct: 1836 RTGW---LVEIVNYNVE----NQQYVAAGDLRALDTVTNVLNFIKLQK------------ 1876 Query: 273 SDVLTVRRACSGEKI 287 D++ ++++ S E++ Sbjct: 1877 IDIIELQKSLSLEEV 1891 >1ntg_A Tyrrs, tyrosyl-tRNA synthetase; beta barrel, ligase; 2.21A {Homo sapiens} SCOP: b.40.4.4 Length = 172 Score = 64.9 bits (158), Expect = 7e-11 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 17/157 (10%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVGLLGV 89 E E+V + + K+++VE++PD D + +ID G+ + VV G Sbjct: 1 EPEEVIP--SRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPK---- 54 Query: 90 WAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLSDY 149 + + +K+RG+ES GM+ ++ ++ P + G + + Sbjct: 55 -EELQDRLVVVLCNLKPQKMRGVESQGMLLCASIEGINRQV-EPLDPPAGSAPGEHV--F 110 Query: 150 LELSDPIIDVSLTPNRSD-----CIGVRGIALDLVAA 181 ++ I+ + +A Sbjct: 111 VK-GYEKGQPDEELKPKKKVFEKLQADFKISEECIAQ 146 >1mkh_A Metrs;, C-terminal domain of methionyl-tRNA synthetase; beta barrel, dimerization domain, ligase; 2.01A {Pyrococcus abyssi} SCOP: b.40.4.4 Length = 107 Score = 61.0 bits (148), Expect = 9e-10 Identities = 19/117 (16%), Positives = 47/117 (40%), Gaps = 18/117 (15%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVGLLGV 89 + K+D R + K++ V+ +P+ D ++++D G +V G Sbjct: 7 DFAKLDLR-------VGKIIEVKDHPNADKLYVVKVDLGDE-VRTLVAGLKKYYKPE--- 55 Query: 90 WAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 + + +K+RGI S GM+ + + + +++ + +G ++ Sbjct: 56 -ELLNRYVV-VVANLEPKKLRGIGSQGMLLAADD----GERVALLMPDKEVKLGAKV 106 >2nzh_A Protein CSAA; beta barrel, oligonucleotide/oligosaccharide binding fold, homodimer, chaperone; 1.90A {Bacillus subtilis} PDB: 2nzo_A Length = 113 Score = 55.8 bits (134), Expect = 3e-08 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 6/118 (5%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLG 88 G + +D+ E L ++ E P+ +++ EI + + + Sbjct: 1 GSHMAVIDDFEKLD-IRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQITKRYKP 59 Query: 89 VWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 I N R+I G +S ++ +++ P G ++ Sbjct: 60 EGLINKQVIAVVNF--PPRRIAGFKSEVLVLGGIP---GQGDVVLLQPDQPVPNGTKI 112 >2cwp_A Metrs related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii} Length = 112 Score = 53.9 bits (129), Expect = 1e-07 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 9/118 (7%) Query: 29 GLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLG 88 +E+ VD + V E+ I I ++E +V G + Sbjct: 3 YMELYDVDEFWKFQ-MKVGLVKKAEKIKRTKKLIKLIVDFGNEERTIVTGIADQIP---- 57 Query: 89 VWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 G + + +K G+ES GM+ + D ++ +P + PVG R+ Sbjct: 58 PEELEGKKFI-FVVNLKPKKFSGVESQGMLILAET---EDGKVYLIPVPEEVPVGARV 111 >1pxf_A Hypothetical protein YGJH; oligonucleotide-oligosaccharide binding fold, OB fold, beta- barrel; 1.87A {Escherichia coli} SCOP: b.40.4.4 PDB: 3ers_X Length = 111 Score = 50.6 bits (121), Expect = 1e-06 Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 18/118 (15%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVG-LLG 88 + +++ R + K++ V+R+ + D I+++D G+ V P L+G Sbjct: 8 DFARLEMR-------VGKIVEVKRHENADKLYIVQVDVGQKTLQTVTSLVPYYSEEELMG 60 Query: 89 VWAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 + + K+RG S M+ + + ++ P G R+ Sbjct: 61 KTVVVLCNLQK-------AKMRGETSECMLLCAET--DDGSESVLLTPERMMPAGVRV 109 >1gd7_A CSAA protein; oligonucleotide-binding fold, functional dimer, hydrophobic cavity, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: b.40.4.4 Length = 109 Score = 50.3 bits (120), Expect = 2e-06 Identities = 11/117 (9%), Positives = 33/117 (28%), Gaps = 15/117 (12%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCA-ILRIDTGKHQEIQVVCGAPNVRVGLLGV 89 + +D R + +VL E + ++ Sbjct: 6 AFQILDLR-------VGRVLRAEPHEKARKPSYKLWVDLGPLGVKQSSAQITELYR---P 55 Query: 90 WAPPGSCIPENNMIVNVRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRL 146 G + + + +++ G S ++ + ++ + P+GG++ Sbjct: 56 EDLVGRLVVCA-VNLGAKRVAGFLSEVLVLGVPD---EAGRVVLLAPDREVPLGGKV 108 >1pyb_A Methionyl-tRNA synthetase beta subunit; oligonucleotide, oligosaccharide-binding fold, OB-fold, beta-barrel, RNA binding protein; 2.50A {Aquifex aeolicus} SCOP: b.40.4.4 Length = 111 Score = 46.4 bits (110), Expect = 2e-05 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 22/120 (18%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDTGKHQEIQVVCGAPNVRVGLLGVW 90 + KVD R + KVLS ER + + + +E VV G + Sbjct: 11 DFLKVDLR-------VAKVLSAERVEGSEKLLKLTLSLGDEERTVVAGIAK--------Y 55 Query: 91 APPGSCIPENNMIVN---VRKIRGIESTGMMCSEKELMLSDDSASIMELPIDAPVGGRLS 147 P + + +IV RKI GIES GM+ + + ++ S++ D G +LS Sbjct: 56 YTPEELVGKKIVIVANLKPRKIFGIESQGMILAASD----GENLSVIVPDRDVKEGAKLS 111 >3g48_A Chaperone CSAA; structural genomics, niaid structural genomic centers for infectious diseases; 1.50A {Bacillus anthracis} Length = 112 Score = 40.3 bits (94), Expect = 0.002 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 27/124 (21%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCAILR--IDTGKHQEIQVVCGAPN--VRVGL 86 + +D R I V E + +R ID G+ Q L Sbjct: 9 DFLTLDLR-------IGTVTHAEEFKEARVPAIRLEIDFGELGMKQSSAQITKRYNPEDL 61 Query: 87 LGVWAPPGSCIPENNMIVNV--RKIRGIESTGM-MCSEKELMLSDDSASIMELPIDAPVG 143 +G +VN +++ G +S + + E +++ ++ P G Sbjct: 62 IGQQIV---------AVVNFPPKRVAGFKSEVLVLGGVPE----AGDVVLLQPNMELPNG 108 Query: 144 GRLS 147 ++S Sbjct: 109 TKIS 112 >1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Score = 39.1 bits (90), Expect = 0.004 Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 34/121 (28%) Query: 34 KVDNREALSPFTIVKVLSVERNPDLD-CAILRIDTGKHQEIQVVCG-----APNVRVGLL 87 K+D R + K++ V+ +P+ D ++++D G +V G P + Sbjct: 625 KLDLR-------VGKIIEVKDHPNADKLYVVKVDLGDEVR-TLVAGLKKYYKPEELLNRY 676 Query: 88 GVWAPPGSCIPENNMIVNV--RKIRGIESTGM-MCSEKELMLSDDSASIMELPIDAPVGG 144 V ++ N+ +K+RGI S GM + ++ + +++ + +G Sbjct: 677 VV------------VVANLEPKKLRGIGSQGMLLAADD-----GERVALLMPDKEVKLGA 719 Query: 145 R 145 + Sbjct: 720 K 720 >2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 685 Score = 35.7 bits (82), Expect = 0.037 Identities = 47/290 (16%), Positives = 86/290 (29%), Gaps = 46/290 (15%) Query: 421 IEDSLRILERLGFSVIGEYDKFEVS-------VPSW---RQDVEEKADLVEEILRIYGVD 470 IE+ + R+GF P A L + + Sbjct: 71 IENLRQAYLRMGFEEY-INPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEK 129 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL-ASRAMMEVVNWSFISKEQSVLFGGGQR 529 + E L + E K SLQ+ Y K L ++E+ N IS E + Sbjct: 130 ISQIEKLGIKVSEHKE--SLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVF 187 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + +R+ + G +++ F +F + + + E + ++ Sbjct: 188 PEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMT 247 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF------VSLDSLRFESG 643 + + VD+ D KA A ++ F D + + Sbjct: 248 -----YHSASC---AIAGEG------VDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYY 293 Query: 644 APSW------YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 P YHP + E+ FG + P L +G+ P+ Sbjct: 294 TPETQTEVYAYHPKLKEWL----EV-AT-FGVYSPVALSKYGIDVPVMNL 337 >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 665 Score = 35.3 bits (81), Expect = 0.057 Identities = 47/290 (16%), Positives = 86/290 (29%), Gaps = 46/290 (15%) Query: 421 IEDSLRILERLGFSVIGEYDKFEVS-------VPSW---RQDVEEKADLVEEILRIYGVD 470 IE+ + R+GF P A L + + Sbjct: 71 IENLRQAYLRMGFEEY-INPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEK 129 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL-ASRAMMEVVNWSFISKEQSVLFGGGQR 529 + E L + E K SLQ+ Y K L ++E+ N IS E + Sbjct: 130 ISQIEKLGIKVSEHKE--SLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVF 187 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + +R+ + G +++ F +F + + + E + ++ Sbjct: 188 PEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMT 247 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPF------VSLDSLRFESG 643 + + VD+ D KA A ++ F D + + Sbjct: 248 -----YHSASC---AIAGEG------VDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYY 293 Query: 644 APSW------YHPGRSGIIKTSAEIVLGYFGEFHPNILDFFGLSNPICGF 687 P YHP + E+ FG + P L +G+ P+ Sbjct: 294 TPETQTEVYAYHPKLKEWL----EV-AT-FGVYSPVALSKYGIDVPVMNL 337 >3hj7_A TRNA(Ile)-lysidine synthase; helix-turn-helix, pseudo-knot, ATP-binding, cytoplasm, ligase, nucleotide-binding, tRNA processing; 2.20A {Geobacillus kaustophilus} Length = 142 Score = 34.5 bits (79), Expect = 0.088 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 15/97 (15%) Query: 252 ITNYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN----------QEYDLSPDN 301 +Y G V D + +S L VR G++++ E + Sbjct: 30 GEHYPRKQAGNDWFVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRME 89 Query: 302 -----VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 +V +DGRI + G+ + ++ Sbjct: 90 RDRWPIVEDADGRILWVPGLKKSAFEAQNRGQARYIL 126 >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 Score = 34.2 bits (77), Expect = 0.11 Identities = 13/57 (22%), Positives = 18/57 (31%), Gaps = 29/57 (50%) Query: 455 EKADL--VEEILRIYGVDQIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVLASRAMME 509 EK L ++ L++Y D S P LA +A ME Sbjct: 18 EKQALKKLQASLKLYADD---SAP------------------------ALAIKATME 47 Score = 31.9 bits (71), Expect = 0.51 Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 25/52 (48%) Query: 582 EGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSV---IE 630 E Q ++K ++ S +L++D S A AL++ +E Sbjct: 18 EKQ-----ALKK----LQASLKLYADDS-------------APALAIKATME 47 Score = 31.1 bits (69), Expect = 1.1 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 15/30 (50%) Query: 121 EKE--------LML-SDDSA---SI---ME 135 EK+ L L +DDSA +I ME Sbjct: 18 EKQALKKLQASLKLYADDSAPALAIKATME 47 >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2} Length = 648 Score = 33.4 bits (76), Expect = 0.20 Identities = 46/291 (15%), Positives = 85/291 (29%), Gaps = 48/291 (16%) Query: 421 IEDSLRILERLGFSVIGEYDKFEVS-------VPSW---RQDVEEKADLVEEILRIYGVD 470 IE+ + R+GF P A L + + Sbjct: 71 IENLRQAYLRMGFEEY-INPVIVDERDIYKQFGPEAMAVLDRCFYLAGLPRPDVGLSDEK 129 Query: 471 QIKSEPLPLTQVEDKRNLSLQQSRTRYVKRVL-ASRAMMEVVNWSFISKEQSVLFGGGQR 529 + E L + E K SLQ+ Y K L ++E+ N IS E + Sbjct: 130 ISQIEKLGIKVSEHKE--SLQKILHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVF 187 Query: 530 ELEILNPISADMSNMRTSLLPGLLKATGRNVDRAIADFAIFEVSHVYENDTPEGQKYMAA 589 + +R+ + G +++ F +F + + + E + ++ Sbjct: 188 PEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMT 247 Query: 590 GIRKGSSGIEGSGRLWSDKSEERCRFVDLFDAKADALSVIEPFVSLD-SLRFESGAPSWY 648 + + VD+ D KA A ++ F + + +Y Sbjct: 248 -----YHSASC---AIAGEG------VDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYY 293 Query: 649 HPGRSGIIKTSAEI------------VLGYFGEFHPNILDFFGLSNPICGF 687 P T E+ V FG + P L +G+ P+ Sbjct: 294 TPE------TQTEVYAYHPKLKEWLEVAT-FGVYSPVALSKYGIDVPVMNL 337 >3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus} Length = 464 Score = 32.3 bits (72), Expect = 0.38 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 15/95 (15%) Query: 254 NYVSLDRGYPSHVFDASRISDVLTVRRACSGEKILALDN----------QEYDLSPDN-- 301 +Y G V D + +S L VR G++++ E + Sbjct: 362 HYPRKQAGNDWFVVDPASVSLPLRVRTRRRGDRMVLKGTGGTKKLKEIFIEAKIPRMERD 421 Query: 302 ---VVIASDGRIQSIAGIIGGKHAGCDDNTTDVLV 333 +V +DGRI + G+ + ++ Sbjct: 422 RWPIVEDADGRILWVPGLKKSAFEAQNRGQARYIL 456 >2q2i_A AGR_C_4014P, secretion chaperone; beta barrel, OB fold, homodimer, protein secretion; 1.55A {Agrobacterium tumefaciens str} Length = 116 Score = 32.1 bits (73), Expect = 0.49 Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 24/122 (19%) Query: 31 EVEKVDNREALSPFTIVKVLSVERNPDLDCAILR--IDTGKHQEIQVVCGAPNVRVGLLG 88 + EKVD R + ++ P+ ++ ID G I+ + Sbjct: 12 DFEKVDIR-------VGTIVEAVPFPEARKPAIKVKIDFGPEIGIKKS-------SAQIT 57 Query: 89 VWAPPGSCIPENNMIV-NV--RKIRGIESTGM-MCSEKELMLSDDSASIMELPIDAPVGG 144 V P S + + V N R+I S + + + + + P G Sbjct: 58 VHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTLGFADA----NGDIVLAAVERPVPNGE 113 Query: 145 RL 146 ++ Sbjct: 114 KM 115 >2zin_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, pyrrolysine, ATP analogue, non-natural amino acid, unnatural amino acid, ATP-binding; HET: ANP LBY; 1.79A {Methanosarcina mazei} PDB: 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* Length = 291 Score = 31.6 bits (71), Expect = 0.67 Identities = 10/80 (12%), Positives = 26/80 (32%), Gaps = 1/80 (1%) Query: 616 VDLFDAKADALSVIEPFVSLDSLRFESGAPSWYHPGRSGIIKTSAEIVLGYFGEFHPNIL 675 + + + S+I F++ + F+ S + ++ L + Sbjct: 187 MGSGCTRENLESIITDFLNHLGIDFKIVGDS-CMVYGDTLDVMHGDLELSSAVVGPIPLD 245 Query: 676 DFFGLSNPICGFEVYLDSIP 695 +G+ P G L+ + Sbjct: 246 REWGIDKPWIGAGFGLERLL 265 >3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 Score = 28.8 bits (64), Expect = 4.5 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 4/41 (9%) Query: 676 DFFGLSNPICGFEVYLDSIPISQKKRTKTKKVVHLSSLHPV 716 D G S+P +Y I +TKT K SL+P Sbjct: 24 DILGASDPYVRVTLYDPMSGILTSVQTKTIK----KSLNPK 60 >3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp} Length = 182 Score = 28.9 bits (63), Expect = 4.6 Identities = 8/29 (27%), Positives = 17/29 (58%) Query: 422 EDSLRILERLGFSVIGEYDKFEVSVPSWR 450 E ++ + ++ GF +IGE+ VP ++ Sbjct: 139 ERAVHVYKKAGFEIIGEFIASWHPVPHYK 167 >2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A* Length = 301 Score = 28.5 bits (63), Expect = 5.8 Identities = 6/30 (20%), Positives = 11/30 (36%) Query: 424 SLRILERLGFSVIGEYDKFEVSVPSWRQDV 453 SL + R+G + + P + V Sbjct: 140 SLAVAARVGLTERARLAQHYPHRPGPHEMV 169 >1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1 Length = 161 Score = 28.6 bits (63), Expect = 5.9 Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 3/74 (4%) Query: 189 INISCPLSSESIPLEIKFDLDDSSLCKGFAMCCVKGVRNNVAPNWMRQRLKAVGLRSISA 248 +N+ E L+ D C R ++R+R + Sbjct: 65 VNLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLH 124 Query: 249 LVDITNYVSLDRGY 262 ++ YV L GY Sbjct: 125 YPEL--YV-LKGGY 135 >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} Length = 508 Score = 28.5 bits (63), Expect = 6.4 Identities = 25/142 (17%), Positives = 39/142 (27%), Gaps = 19/142 (13%) Query: 558 RNVDRAIADFAIFEVSHVYENDTPEGQKYMAAGIRKGSSGIEGSGRLWSDKSEERCRFVD 617 +N+ R A + P + R + + L E D Sbjct: 321 KNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGV-VAD 379 Query: 618 LFDAKADALSVIEPFVSLDS---LRFESG-----APSW----YHPGRSGIIKTSAEIVLG 665 + V+ F + LRF+ PS YH G + E+ Sbjct: 380 HGLTLGHLMGVLREFFTKLGITQLRFKPAYNPYTEPSMEVFSYHQGLKKWV----EV-GN 434 Query: 666 YFGEFHPNILDFFGLSNPICGF 687 G F P +L GL + Sbjct: 435 -SGVFRPEMLLPMGLPENVSVI 455 >1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 1i4o_A 1gqf_A 3h1p_A* 1shj_A* 1k86_A 1k88_A 1shl_A* Length = 305 Score = 28.1 bits (62), Expect = 8.4 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 2/72 (2%) Query: 8 LKDHLDTDVSLEKICDTLTSIGLEVEKVDNREALSPFTIVKVLSVERNPDLDCAILRIDT 67 + TD E + S+G +V ++ ++K S E + + C + + Sbjct: 86 MGVRNGTDKDAEALFKCFRSLGFDVIVYNDCSCAKMQDLLKKASEEDHTNAACFACILLS 145 Query: 68 GKHQEIQVVCGA 79 H E V+ G Sbjct: 146 --HGEENVIYGK 155 Database: pdb70 Posted date: Jan 26, 2011 11:21 AM Number of letters in database: 5,693,230 Number of sequences in database: 24,244 Lambda K H 0.320 0.138 0.400 Gapped Lambda K H 0.267 0.0548 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 24244 Number of Hits to DB: 7,001,716 Number of extensions: 342182 Number of successful extensions: 1126 Number of sequences better than 10.0: 1 Number of HSP's gapped: 1053 Number of HSP's successfully gapped: 49 Length of query: 805 Length of database: 5,693,230 Length adjustment: 100 Effective length of query: 705 Effective length of database: 3,268,830 Effective search space: 2304525150 Effective search space used: 2304525150 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 61 (27.7 bits)