HHsearch alignment for GI: 254780317 and conserved domain: CHL00192
>CHL00192 syfB phenylalanyl-tRNA synthetase beta chain; Provisional.
Probab=99.03 E-value=2.3e-08 Score=82.14 Aligned_cols=217 Identities=15% Similarity=0.238 Sum_probs=140.0
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-EEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 1000001123212267423899999999999987398-762372341588988861898877331633127750566655
Q gi|254780317|r 98 SVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGF-ALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGK 176 (366)
Q Consensus 98 ~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF-~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~ 176 (366)
T Consensus 379 nI~~~~p~--~-~~~~~~~~~~~~~~~lr~~L~~~Gf~E~itysf~s~~~~------------~---~~~v~l~NPis~e 440 (702)
T CHL00192 379 NFISKLPL--I-QFDGRLSFLRNFIDKIRSLLRNLGLTELVHYSLVKSYTY------------Y---KGEIKLYNPLLQD 440 (702)
T ss_pred CCCCCCCC--C-CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHC------------C---CCCEEECCCCCHH
T ss_conf 36555787--5-467888988999999999999689834775314684445------------6---7728970875243
Q ss_pred CCCCCCCCCCHHHHHHHHC----CCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEC------------CCCCHHHHHHH
Q ss_conf 6322446763055554303----6312254105764745442137810020057861------------78668999889
Q gi|254780317|r 177 HKLLRTHTSPVQIRVMESQ----DLPIKVIVPGKTYRRDSDSTHSPMFHQIEGLVVS------------DSATIANLRWV 240 (366)
Q Consensus 177 ~~lLRthTS~vQiR~m~~~----~pP~~~~~~GrvyR~d~D~tH~~~FhQ~egl~v~------------~~i~~~~lk~~ 240 (366)
T Consensus 441 ~s~LR~sLlpgLL~~~~~N~~r~~~~i~lFEiG~vf~~~~~~~--~e~~~l~~~~~~g~~~~~~w~~~~~~~dFfd~Kg~ 518 (702)
T CHL00192 441 YSTLRSSLLPGLILAQQYNLKQSNQTIEGFEIGHVFRDNTEKI--FETLHLAGGIGGGLDIRSSWSEKAQSLNWYEAKGI 518 (702)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC--CCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 7888887799999999861535997742897645526887886--21122999998188665444566776789999999
Q ss_pred HHHHHHHHCCCCCCEEEEEE-----CCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCE
Q ss_conf 99999997088866264542-----3889852661036787505880422468834898457563888998569880003
Q gi|254780317|r 241 LESFCKSFFEVSSLQMRFRP-----SFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIY 315 (366)
Q Consensus 241 l~~~~~~~fg~~~~~~r~rp-----~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~ 315 (366)
T Consensus 519 ve~ll~~l-~~---~~~~~~~~~~~~~~~~~hPg~sA~I~~-----------~~--~~iG~iG~lhP~v~~~~~l~~~v- 580 (702)
T CHL00192 519 VEEFFQRL-NL---PIVWKKIDSLDQRNKFLHPGRSAEIIY-----------NN--ENIGIFGQLHPLLASNLGLNTST- 580 (702)
T ss_pred HHHHHHHH-CC---CCCCEEECCCCCCCCCCCCCCEEEEEE-----------CC--EEEEEEEEECHHHHHHCCCCCCE-
T ss_conf 99999981-89---842002014555423348775489999-----------99--79999999879999873999977-
Q ss_pred EEEEEECCHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCC-CCCCCCCCCC
Q ss_conf 79963134469979973897058766358888874489844-6884145889
Q gi|254780317|r 316 QGFAWGMGLDRIAMLKYGMPDVREFFGADVRWIEHYGFSPL-DIPPLFSRLA 366 (366)
Q Consensus 316 ~g~AfG~G~eRlaml~~gi~diR~~~~~d~rfl~qf~~~~~-~~~~~~~~~~ 366 (366)
T Consensus 581 --~~~Eidl~~l~~~~~~~~------------~~~~~~~~~skfP~v~RDla 618 (702)
T CHL00192 581 --YLFEFDLEKLQASIEQLN------------YLNYIIQPYSKYPSITRDLS 618 (702)
T ss_pred --EEEEEEHHHHHHHHHHCC------------CCCCCCCCCCCCCCCCEEEE
T ss_conf --999999799432344304------------46665677899997006899