HHsearch alignment for GI: 254780317 and conserved domain: COG0124

>COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=97.61  E-value=0.0017  Score=46.61  Aligned_cols=112  Identities=14%  Similarity=0.219  Sum_probs=80.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHC--CCCCCCCCCCCCEEE-EECCCCCCCCCCCCCCCCHHH
Q ss_conf             74238999999999999873987623723415889888618--988773316331277-505666556322446763055
Q gi|254780317|r  113 GRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALN--FPDDHPARQMHDTFF-VPGIAGGKHKLLRTHTSPVQI  189 (366)
Q Consensus       113 G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLN--iP~~HPARdmqDTFy-l~~~~~~~~~lLRthTS~vQi  189 (366)
T Consensus        16 ~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~----telf~r~~Ge~--td~v~kemY~F~D-kggr~laLRpe~Tapv~   88 (429)
T COG0124          16 EDMALREYIESTIRKVFESYGFSEIRTPIFEY----TELFARKSGEE--TDVVEKEMYTFKD-KGGRSLALRPELTAPVA   88 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC----HHHHHHCCCCC--CCCCCCCEEEEEE-CCCCEEEECCCCCHHHH
T ss_conf             77899999999999999980997655755111----66762016974--3333210289994-89988984466749999


Q ss_pred             HHHHHC----CCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCC
Q ss_conf             554303----63122541057647454-4213781002005786178
Q gi|254780317|r  190 RVMESQ----DLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDS  231 (366)
Q Consensus       190 R~m~~~----~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~  231 (366)
T Consensus        89 R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~  135 (429)
T COG0124          89 RAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSD  135 (429)
T ss_pred             HHHHHCCCCCCCCEEEEEECCEECCCCCCCCCCEEEEECCEEEECCC
T ss_conf             99995622036872599833562378888887503687676776799