HHsearch alignment for GI: 254780317 and conserved domain: PRK00476

Probab=99.26  E-value=2.9e-10  Score=96.02  Aligned_cols=89  Identities=19%  Similarity=0.308  Sum_probs=60.0

Q ss_pred             CCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCC-------CCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf             4238999999999999873987623723415889888618988773316-------331277505666556322446763
Q gi|254780317|r  114 RIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQ-------MHDTFFVPGIAGGKHKLLRTHTSP  186 (366)
Q Consensus       114 ~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARd-------mqDTFyl~~~~~~~~~lLRthTS~  186 (366)
T Consensus       141 ~fr~Rs~i~~~iR~fl~~~gFiEVeTPiL~--------~s~~eG--A~~F~vpsr~~~~~fy----------aL~--qSP  198 (587)
T PRK00476        141 NLKLRSKVTSAIRNFLDDNGFLEIETPILT--------KSTPEG--ARDYLVPSRVHPGKFY----------ALP--QSP  198 (587)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEECCCCCC--------CCCCCC--CCCCCCCCCCCCCCEE----------CCC--CCH
T ss_conf             999999999999999997597400475432--------568666--6443013105788551----------356--797


Q ss_pred             HHHHHHH-HCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCE
Q ss_conf             0555543-0363122541057647454-4213781002005
Q gi|254780317|r  187 VQIRVME-SQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEG  225 (366)
Q Consensus       187 vQiR~m~-~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~eg  225 (366)
T Consensus       199 QLykq~L~vgG~-erVyeig~~FRnE~~~t~r~pEFt~lE~  238 (587)
T PRK00476        199 QLFKQLLMVAGF-DRYYQIARCFRDEDLRADRQPEFTQIDI  238 (587)
T ss_pred             HHHHHHHHHCCC-CEEEEECCCCCCCCCCCCCCCHHHEEEH
T ss_conf             999999885175-5279964312388887666823423111