HHsearch alignment for GI: 254780317 and conserved domain: PRK00960

>PRK00960 seryl-tRNA synthetase; Provisional.
Probab=93.57  E-value=0.35  Score=29.65  Aligned_cols=148  Identities=19%  Similarity=0.362  Sum_probs=85.7

Q ss_pred             HHHHHCCCEEEEE-ECCCCCCCCCCCCC----CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEE-EE----
Q ss_conf             5543036312254-10576474544213----78100200578617866899988999999997088866264-54----
Q gi|254780317|r  190 RVMESQDLPIKVI-VPGKTYRRDSDSTH----SPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMR-FR----  259 (366)
Q Consensus       190 R~m~~~~pP~~~~-~~GrvyR~d~D~tH----~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r-~r----  259 (366)
T Consensus       326 e~v~~d~lPik~FDrSGwtyRwE~GG~~GleRV~EF~RiE~VW~gtpe-~ve~~r~~~~~y~~~~a-e~LdLE~w~ev~d  403 (516)
T PRK00960        326 ELVDVDELPIKFFDKSGWTYRWEGGGAKGLDRVNEFLRIECVWMGTPE-FVEEVRDDTLKYAHILA-EKLDLEYWTEVGD  403 (516)
T ss_pred             CCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHEEEEEEECCHH-HHHHHHHHHHHHHHHHH-HHHCHHHHEEECC
T ss_conf             725655586578855886264047874323555010147778846889-99999888999999988-7743244223056


Q ss_pred             -EC------------CCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCC----CCCEEEEEEEC
Q ss_conf             -23------------88985266103678750588042246883489845756388899856988----00037996313
Q gi|254780317|r  260 -PS------------FFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGID----PDIYQGFAWGM  322 (366)
Q Consensus       260 -p~------------~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d----~~~~~g~AfG~  322 (366)
T Consensus       404 dPfylegr~~e~r~iE~p~-vp~ye~~~~LP~~~------~e~k~v~v~s~nVhG~hf~eGF~VK~~~g~~~WtGC-tG~  475 (516)
T PRK00960        404 DPFYLEGRKLEDRGIEFPD-VPKYEMRLWLPHIK------EERKGVAVTSANIHGTHFVEGFNVKDYKGRKLWTGC-TGV  475 (516)
T ss_pred             CCHHHCCCCCCCCCCCCCC-CCCEEEEEECCCCC------CCCCEEEEEEEEECCCCCCCCCCCEECCCCEEECCC-CCC
T ss_conf             7503225654455643688-88546799657647------767726888863147535676522003587311377-644


Q ss_pred             CHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCCCCCCCCC
Q ss_conf             44699799738970587663588888744898446884145
Q gi|254780317|r  323 GLDRIAMLKYGMPDVREFFGADVRWIEHYGFSPLDIPPLFS  363 (366)
Q Consensus       323 G~eRlaml~~gi~diR~~~~~d~rfl~qf~~~~~~~~~~~~  363 (366)
T Consensus       476 GL~RWv~----------------gFLAQ~Gfd~~~WPe~i~  500 (516)
T PRK00960        476 GLTRWVI----------------GFLAQKGFDPDNWPEEIR  500 (516)
T ss_pred             CHHHHHH----------------HHHHHCCCCCCCCCHHHH
T ss_conf             5789999----------------999870798121649999