HHsearch alignment for GI: 254780317 and conserved domain: PRK02983

>PRK02983 lysS lysyl-tRNA synthetase; Provisional.
Probab=98.98  E-value=2.8e-08  Score=81.56  Aligned_cols=107  Identities=20%  Similarity=0.367  Sum_probs=67.5

Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCC-------CC
Q ss_conf             67654310000011232122674238999999999999873987623723415889888618988773316-------33
Q gi|254780317|r   92 EQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQ-------MH  164 (366)
Q Consensus        92 ~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARd-------mq  164 (366)
T Consensus       757 ~RlR~RYLDLr~----npe~r~~~~~RS~Vi~aiR~~L~~~GFlEVETPiLq~---------~~GGA~ARPFlThsna~d  823 (1099)
T PRK02983        757 ARVRARYLDLAV----NPEARDLIRARSAVLRAVRETLVAKGFLEVETPILQQ---------IHGGANARPFLTHINAYD  823 (1099)
T ss_pred             HHHHHHHHHCCC----CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCC---------CCCCCCCCCCCCCCCCCC
T ss_conf             755645565158----9899999999999999999999878988955754677---------888756785301033678


Q ss_pred             CEEEEECCCCCCCCCCCCCCCCHHH--HHHHHCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEE
Q ss_conf             1277505666556322446763055--55430363122541057647454-42137810020057
Q gi|254780317|r  165 DTFFVPGIAGGKHKLLRTHTSPVQI--RVMESQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGL  226 (366)
Q Consensus       165 DTFyl~~~~~~~~~lLRthTS~vQi--R~m~~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl  226 (366)
T Consensus       824 ~~~YL-------------riAPELflKRLmVGG-f-eRVFEI~RcFRNEglradHnPEFTmLE~Y  873 (1099)
T PRK02983        824 LDLYL-------------RIAPELYLKRLCVGG-V-ERVFELGRAFRNEGVDFSHNPEFTLLEAY  873 (1099)
T ss_pred             CCCEE-------------ECCHHHHHHHHHHCC-C-CCCEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             66145-------------148089999998648-6-31134325446799998749407999999