HHsearch alignment for GI: 254780317 and conserved domain: PRK05159
>PRK05159 aspC aspartyl-tRNA synthetase; Provisional.
Probab=98.95 E-value=1.9e-08 Score=82.73 Aligned_cols=192 Identities=22% Similarity=0.314 Sum_probs=105.7
Q ss_pred HHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf 89999999999998739876237234158898886189887733163312775056665563224467630555543036
Q gi|254780317|r 117 PVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVMESQD 196 (366)
Q Consensus 117 PItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~~~~ 196 (366)
T Consensus 139 ~Rs~i~~~iR~fl~~~gF~EVeTP~l~~--------~~~eG--ga~~f~~~~~~-----~~~yL~~--Spqly~q~li~~ 201 (434)
T PRK05159 139 IRSEVLRAFREFLYEEGFTEIFTPKIVA--------TGTEG--GTELFPVKYFE-----KEAFLAQ--SPQLYKQMMMAA 201 (434)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCCCCC--------CCCCC--CCCCCCEEECC-----CEEEECC--CCHHHHHHHHHC
T ss_conf 9999999999999877919997874325--------67887--55658613127-----5334146--837999998763
Q ss_pred CEEEEEECCCCCCCCC-CCC-CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC----C---------CC---EEEE
Q ss_conf 3122541057647454-421-378100200578617866899988999999997088----8---------66---2645
Q gi|254780317|r 197 LPIKVIVPGKTYRRDS-DST-HSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEV----S---------SL---QMRF 258 (366)
Q Consensus 197 pP~~~~~~GrvyR~d~-D~t-H~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~----~---------~~---~~r~ 258 (366)
T Consensus 202 G~~rvfeI~~~FR~E~~~t~RH~pEFT~lE~e~af--~d~~d~m~~~E~li~~i~~~v~~~~~~~~~~~~~~~~~~~~~~ 279 (434)
T PRK05159 202 GFERVFEIGPAFRAEEHNTTRHLNEAISIDVEMGF--IDEEDVMDLLENLLKYVYEDVAENCEKELELLGIELPVPETPI 279 (434)
T ss_pred CCCCEEEECCCEECCCCCCCCCHHHHHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCC
T ss_conf 56855996601023658754453567656666310--6899999999999999999998656477863586556679986
Q ss_pred --------------------------------------------E---E-CCCCC-CCCCCE-------EEEEEECCCCE
Q ss_conf --------------------------------------------4---2-38898-526610-------36787505880
Q gi|254780317|r 259 --------------------------------------------R---P-SFFPF-TEPSFE-------VDVRCSFSDGI 282 (366)
Q Consensus 259 --------------------------------------------r---p-~~fPf-tePs~E-------vdv~~~~~~~~ 282 (366)
T Consensus 280 ~rit~~eai~~l~~~~~~~~~g~dl~~~~e~~l~~~~~~~~~~fI~d~P~~~~pfy~~~~~~~~~~~~~fdl~------- 352 (434)
T PRK05159 280 PRITYDEAIEILKSKGVEISWGDDLDTEGERLLGKYVKESDFYFITDWPTEIRPFYTMPYEDDPEITKSFDLM------- 352 (434)
T ss_pred CEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHCCCCCCCCCCCCCCEEEEEEEE-------
T ss_conf 4778999999998519987855553789999999984758988998997000865467778883200143267-------
Q ss_pred EEECCCCCEEEEECCCC--CCHHHH----HHCCCCCCCEE------------EEEEECCHHHHHHHHCCCCCHHHH
Q ss_conf 42246883489845756--388899----85698800037------------996313446997997389705876
Q gi|254780317|r 283 IKFDEGTEWMEILGCGM--VDPRVL----RGVGIDPDIYQ------------GFAWGMGLDRIAMLKYGMPDVREF 340 (366)
Q Consensus 283 ~~~~~~~~WiEi~g~Gm--~~p~vl----~~~g~d~~~~~------------g~AfG~G~eRlaml~~gi~diR~~ 340 (366)
T Consensus 353 ---~--~G~-Ei~~G~~r~~d~~~l~~~~~~~g~~~~~~~~yl~al~yG~PP~gG~glGiDRLvm~l~g~~sIrdv 422 (434)
T PRK05159 353 ---Y--RGL-EITSGAQRIHDYDMLVESIKEKGLNPESFEFYLEAFKYGMPPHAGWGLGLERLTMKLLGLENVREA 422 (434)
T ss_pred ---E--CCE-EEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCHHEE
T ss_conf ---7--669-984310111789999999997498989999999996679998755878799999998199966548