HHsearch alignment for GI: 254780317 and conserved domain: PRK06253

>PRK06253 O-phosphoseryl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=357.97  Aligned_cols=246  Identities=24%  Similarity=0.408  Sum_probs=186.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECH---
Q ss_conf             99999999999999999856766676543100000112321226742389999999999998739876237234158---
Q gi|254780317|r   69 QLKVDISGKISARKDFIRNQLIFEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETD---  145 (366)
Q Consensus        69 elK~~Ie~~i~~kk~~L~~~~~~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd---  145 (366)
T Consensus        10 ~a~~DFe~AW~~g~~~i~~~~---------~~~~YP--r~~~~~gk~HPv~~tI~~lReayL~mGF~E~~nPiiv~e~~v   78 (527)
T PRK06253         10 LAKKDFEKAWHEGKKLIKPPG---------LNERYP--RLKYEFGKAHPVFDTIQRLREAYLRMGFEEMMNPVIVDEKDI   78 (527)
T ss_pred             HHHHHHHHHHHHCCCCCCCCC---------CCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCEECCHHHH
T ss_conf             987538999872766226788---------444587--647666887837999999999999708487628522345888


Q ss_pred             HHHH---------------------------------HHHCCCCCCCCCCCCCEEEE--E----CC--------------
Q ss_conf             8988---------------------------------86189887733163312775--0----56--------------
Q gi|254780317|r  146 YYNF---------------------------------AALNFPDDHPARQMHDTFFV--P----GI--------------  172 (366)
Q Consensus       146 ~~NF---------------------------------daLNiP~~HPARdmqDTFyl--~----~~--------------  172 (366)
T Consensus        79 ~~qFg~eA~avlDr~FYLagLPrP~vGis~e~~~~i~~~~~~~~~~~~e~lr~~lh~ykkg~idGdDLv~ei~~~l~v~d  158 (527)
T PRK06253         79 YKQFGPEAMAVLDRCFYLAGLPRPNVGISDERIAQIEEILGDLSEEEKEKLREILHAYKKGEIDGDDLVLEISNALEVSD  158 (527)
T ss_pred             HHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
T ss_conf             87408488988766644247898875622677999998617887677899999988752677664154788876406675


Q ss_pred             ------------------CCCCCCCCCCCCCCH---HHHHHHH-CCCEEEEEECCCCCCCCC--CCCCCCCCCCCCEEEE
Q ss_conf             ------------------665563224467630---5555430-363122541057647454--4213781002005786
Q gi|254780317|r  173 ------------------AGGKHKLLRTHTSPV---QIRVMES-QDLPIKVIVPGKTYRRDS--DSTHSPMFHQIEGLVV  228 (366)
Q Consensus       173 ------------------~~~~~~lLRthTS~v---QiR~m~~-~~pP~~~~~~GrvyR~d~--D~tH~~~FhQ~egl~v  228 (366)
T Consensus       159 ~~~~~~ld~VFPEfkeL~p~s~~~tLRSHmTsgwfitL~~l~~k~~~P~klFSIDRcFRrEq~eD~~hL~~yhsascvv~  238 (527)
T PRK06253        159 AMVVKILDEVFPEFKELKPESSRLTLRSHMTSGWFITLSALWERKPLPFKLFSIDRCFRREQKEDASRLMTYHSASCVVA  238 (527)
T ss_pred             CHHHHHHHHHCHHHHHCCCCCCCCEEHHCCCCHHHHHHHHHHHCCCCCEEEEEEEHEEECHHHCCHHHHHHHHEEEEEEE
T ss_conf             13435466545455522554445341001030278879999726799836874101022000024556345443226997


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEC------CCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCH
Q ss_conf             178668999889999999970888662645423------88985266103678750588042246883489845756388
Q gi|254780317|r  229 SDSATIANLRWVLESFCKSFFEVSSLQMRFRPS------FFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDP  302 (366)
Q Consensus       229 ~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~------~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p  302 (366)
T Consensus       239 ~edVn~d~gkav~~~lL~~f-GF~--~frFrPdek~skYY~P~Tq--tEVy~yh---------p~~~gWvEvatfGIysP  304 (527)
T PRK06253        239 GEDVTVDDGKAVAEGLLSQF-GFT--NFRFRPDEKRSKYYTPDTQ--TEVYAYH---------PKLDGWVEVATFGIYSP  304 (527)
T ss_pred             CCCCCHHHHHHHHHHHHHHH-CCC--EEEECCCCCCCCCCCCCCC--EEEEEEC---------CCCCCEEEEECCCCCCH
T ss_conf             59866777799999999970-975--3784344235665378863--2799963---------66786289731425675


Q ss_pred             HHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHH
Q ss_conf             8998569880003799631344699799738970587663
Q gi|254780317|r  303 RVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFG  342 (366)
Q Consensus       303 ~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~  342 (366)
T Consensus       305 ~aL~~ygI~~PV---mnlGlGvERLAMI~~~~~DiR~l~y  341 (527)
T PRK06253        305 TALAEYGIDVPV---MNLGLGVERLAMILHNAEDVREMVY  341 (527)
T ss_pred             HHHHHCCCCCCE---EECCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             445431999742---2001118999999818277887633