HHsearch results for GI: 254780317 and protein with PDBid: 1e1o_A

>1e1o_A Lysyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=98.93  E-value=3e-08  Score=79.69  Aligned_cols=114  Identities=16%  Similarity=0.217  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHH-HCC
Q ss_conf             9999999999998739876237234158898886189887733163312775056665563224467630555543-036
Q gi|254780317|r  118 VTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVME-SQD  196 (366)
Q Consensus       118 Itqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m~-~~~  196 (366)
                      =++++..|+++|.+.||..++-|-+.+         +|..--||+-  .|..+.  -+...-|  ++||-+-..|. ...
T Consensus       186 Rs~i~~~iR~f~~~~gFiEVeTPiL~~---------~~~ga~~~~~--~~~~~~--~~~~~yL--~qSpql~~q~lm~~g  250 (504)
T 1e1o_A          186 RSKILAAIRQFMVARGFMEVETPMMQV---------IPGGASARPF--ITHHNA--LDLDMYL--RIAPELYLKRLVVGG  250 (504)
T ss_dssp             HHHHHHHHHHHHHTTTCEECCCCSEES---------SCCSSCCCCC--EEEETT--TTEEEEE--CSCSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCEEEEECCEEE---------ECCCCCCCCE--ECCCCC--CCCCCCC--CCCHHHHHHHHHHHC
T ss_conf             999999999999857967986031254---------1487667640--005557--8967211--558689999998603


Q ss_pred             CEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHC
Q ss_conf             3122541057647454-4213781002005786178668999889999999970
Q gi|254780317|r  197 LPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFF  249 (366)
Q Consensus       197 pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~f  249 (366)
                      . =|++.+|+|||++. ++.|.|+|.|+|.=+.-  ++..|+...++.++++++
T Consensus       251 ~-~rvfei~~~FR~E~~~trH~~EFt~le~e~af--~d~~d~m~~~E~li~~i~  301 (504)
T 1e1o_A          251 F-ERVFEINRNFRNEGISVRHNPEFTMMELYMAY--ADYHDLIELTESLFRTLA  301 (504)
T ss_dssp             C-CEEEEEEEEECCCCCCC-CCSEEEEEEEEEES--CCHHHHHHHHHHHHHHHH
T ss_pred             C-CHHEEECCEECCCCCCCCCCCCEEEEEEEEHH--CCHHHHHHHHHHHHHHHH
T ss_conf             1-12225530154776776689635553310020--778989998999999999