HHsearch results for GI: 254780317 and protein with PDBid: 1hc7_A

>1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A
Probab=91.40  E-value=0.88  Score=25.12  Aligned_cols=199  Identities=11%  Similarity=0.097  Sum_probs=110.1

Q ss_pred             CCHHHHHHHHHHHHHHHCCCEEECCCEEEC--HHHHHHHHCCCCCCCCCCCCCEEEEECC---CCCCCCCCCCCCCCHHH
Q ss_conf             238999999999999873987623723415--8898886189887733163312775056---66556322446763055
Q gi|254780317|r  115 IHPVTQVIDEVTCIFMDMGFALEEGSDIET--DYYNFAALNFPDDHPARQMHDTFFVPGI---AGGKHKLLRTHTSPVQI  189 (366)
Q Consensus       115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEt--d~~NFdaLNiP~~HPARdmqDTFyl~~~---~~~~~~lLRthTS~vQi  189 (366)
                      ......+.+-+.+.+.+.||+.+.-|-+-.  .||.      -..|=.----+.|++...   ...+...||+.+-+...
T Consensus        44 ~~i~~~i~~~i~~~~~~~G~~ev~~P~li~~~~l~k------~sgh~~~f~~emf~v~~~~~~~~~e~~~LrPt~e~~~~  117 (477)
T 1hc7_A           44 YAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRK------EAEHVEGFSPELAVVTHAGGEELEEPLAVRPTSETVIG  117 (477)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------------CCTTCEEEEEESSSEEEEEEEECSCSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH------HHCCHHHCCCCEEEEECCCCHHHCCCCCCCCCCCHHHH
T ss_conf             999999999999999985997998966157899998------86764131756078851684110243146897668899


Q ss_pred             HHHHH-----CCCEEEEEECCCCCCCCCC---CCCCCCCCCCCEEEECCCC-----CHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             55430-----3631225410576474544---2137810020057861786-----689998899999999708886626
Q gi|254780317|r  190 RVMES-----QDLPIKVIVPGKTYRRDSD---STHSPMFHQIEGLVVSDSA-----TIANLRWVLESFCKSFFEVSSLQM  256 (366)
Q Consensus       190 R~m~~-----~~pP~~~~~~GrvyR~d~D---~tH~~~FhQ~egl~v~~~i-----~~~~lk~~l~~~~~~~fg~~~~~~  256 (366)
                      ....+     .+.|+|+.-.|.|||++.-   -+..-+|+|-|+-.++.+-     .+.........|+..+.- -.+..
T Consensus       118 ~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~gllR~ReF~~~D~ht~~~t~e~a~~~~~~~~~~y~~~~~~~~~-~~~~~  196 (477)
T 1hc7_A          118 YMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA-IPVIE  196 (477)
T ss_dssp             HHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_pred             HHHHCCCCCCCCCCHHHHHCCCCEECCCCCCCCCEEEEEEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHEEE
T ss_conf             99962355202488888615301000246777534899987512444223888899999999999999764311-11120


Q ss_pred             EEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCC---CCC-----CEEEEEEECCHHHHH
Q ss_conf             454238898526610367875058804224688348984575638889985698---800-----037996313446997
Q gi|254780317|r  257 RFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGI---DPD-----IYQGFAWGMGLDRIA  328 (366)
Q Consensus       257 r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~---d~~-----~~~g~AfG~G~eRla  328 (366)
                      ..++..-.|..--...++.+...        .+.-++++.+=-+..+--+..++   |.+     .++ --||+| +|+.
T Consensus       197 g~~~~~e~~~ga~~~~~ie~~~~--------~Gr~~q~gt~~~lg~~fs~~f~i~y~d~~g~~~~~~~-~~~Gi~-~R~i  266 (477)
T 1hc7_A          197 GLKTEKEKFAGAVYTTTIEALMK--------DGKALQAGTSHYLGENFARAFDIKFQDRDLQVKYVHT-TSWGLS-WRFI  266 (477)
T ss_dssp             EECCTTTSCTTSSEEEEEEEECT--------TSCEEEEEEEEEEETHHHHHTTCEEECTTSCEEECEE-EEEEEE-THHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHH--------CCHHHHCCCEEECCCCHHHHCCCEEECCCCCEEEEEE-EECCCC-HHHH
T ss_conf             56545545446343413467664--------4504432733303430456526556435784333566-640441-6789


Q ss_pred             HH
Q ss_conf             99
Q gi|254780317|r  329 ML  330 (366)
Q Consensus       329 ml  330 (366)
                      ..
T Consensus       267 ~a  268 (477)
T 1hc7_A          267 GA  268 (477)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             99