HHsearch results for GI: 254780317 and protein with PDBid: 1x54_A
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=98.88 E-value=1.6e-07 Score=74.34 Aligned_cols=113 Identities=14% Similarity=0.010 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHH-HHHH
Q ss_conf 238999999999999873987623723415889888618988773316331277505666556322446763055-5543
Q gi|254780317|r 115 IHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQI-RVME 193 (366)
Q Consensus 115 ~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQi-R~m~ 193 (366)
..--++++..|+++|.+.||..++-|-+.+ .+....|+ .|-... .+....| ++||=+- +.|.
T Consensus 135 ~r~Rs~i~~~iR~~l~~~gF~EVeTP~L~~---------~~~~g~a~----~~~~~~--~~~~~~L--~~spql~~k~li 197 (434)
T 1x54_A 135 MKVKETLIMAAREWLLKDGWHEVFPPILVT---------GAVEGGAT----LFKLKY--FDKYAYL--SQSAQLYLEAAI 197 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEECCCCSEES---------CCSSCGGG----CCEEEE--TTEEEEE--CSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCEEEEEECEEEE---------ECCCCCCC----CCEECC--CCCCHHH--CCCHHHHHHHHH
T ss_conf 989999999999987627849985010255---------21456666----631012--5603342--143666666640
Q ss_pred HCCCEEEEEECCCCCCCCC-CC-CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 0363122541057647454-42-1378100200578617866899988999999997
Q gi|254780317|r 194 SQDLPIKVIVPGKTYRRDS-DS-THSPMFHQIEGLVVSDSATIANLRWVLESFCKSF 248 (366)
Q Consensus 194 ~~~pP~~~~~~GrvyR~d~-D~-tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~ 248 (366)
. . ==|++.+|||||+|. ++ +|.|+|.|+|.-+...+ ..++...++.+++.+
T Consensus 198 ~-G-~~rvfei~~~FR~E~~~~~rH~pEFt~lE~y~a~~d--~~~~m~~~e~li~~~ 250 (434)
T 1x54_A 198 F-G-LEKVWSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD--LWDIMKVEEELVSYM 250 (434)
T ss_dssp H-H-HSEEEEEEEEECCCCCCCSSCCSEEEEEEEEEETCC--HHHHHHHHHHHHHHH
T ss_pred C-C-CCCEEECCCEECCCCCCCCCCCCCEEEECHHHHCCC--HHHHHHHHHHHHHHH
T ss_conf 2-5-331154243023676668666765342112542388--999999999999999