HHsearch results for GI: 254780317 and protein with PDBid: 2odr_C
>2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=100.00 E-value=0 Score=534.48 Aligned_cols=274 Identities=19% Similarity=0.318 Sum_probs=227.5
Q ss_pred HHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99987615899-88999999999999999999999999999856766676543100000112321226742389999999
Q gi|254780317|r 46 SSLLKDLKNLD-SQQVSARGAILNQLKVDISGKISARKDFIRNQLIFEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDE 124 (366)
Q Consensus 46 t~llK~Lk~Ls-~EeKk~~Gk~iNelK~~Ie~~i~~kk~~L~~~~~~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~e 124 (366)
+...++.|-.+ ...|=+.|...+..+.+++.+... ....+..+.+|+++|. .....|++|||++++++
T Consensus 5 ~~~~~S~GL~tdaShrFERgvd~eLa~ka~ErAw~~---------~~eiv~~~~iD~~~Pr--~~~~~Gk~HPl~~~iee 73 (701)
T 2odr_C 5 HHHHHSSGLVPRGSHMFKREEIIEMANKDFEKAWIE---------TKDLIKAKKINESYPR--IKPVFGKTHPVNDTIEN 73 (701)
T ss_dssp ------------------CHHHHHHHHHCHHHHHHH---------HGGGSCCCCTTTSSTT--CCCCCCBCCHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---------HCCCCCCCCCCCCCCC--CCCCCCCCCHHHHHHHH
T ss_conf 544435787850665000114377789999999985---------0010265745545999--88777770717999999
Q ss_pred HHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECC--------------------------------
Q ss_conf 999998739876237234158898886189887733163312775056--------------------------------
Q gi|254780317|r 125 VTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGI-------------------------------- 172 (366)
Q Consensus 125 I~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~-------------------------------- 172 (366)
|++||.+|||+++.||+|+++ ||||+||+|++||||| ||||++..
T Consensus 74 IreIL~rLGFeE~~gp~Iv~e-wnFD~LfvP~~HPaRD--DtFyLE~DliEEVaRi~GYdnIp~~~p~~~~~~~e~~e~~ 150 (701)
T 2odr_C 74 LRQAYLRMGFEEYINPVIVDE-RDIYKQFGPEAMAVLD--RCFYLAGLPRPDVGLSDEKISQIEKLGIKVSEHKESLQKI 150 (701)
T ss_dssp HHHHHHHTTCEECCCCSEEEH-HHHHHHHGGGHHHHHH--TCEEEEECCC------------------------------
T ss_pred HHHHHHHCCCEEEECCEEEEE-ECCCCCCCCCCCCHHH--CCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 999999789889748968454-5164116898774320--7154347641132023452233212455554420013566
Q ss_pred --------------------------------------------CCCCCCCCCCCCCCH---HHHHHHHCC-CEEEEEEC
Q ss_conf --------------------------------------------665563224467630---555543036-31225410
Q gi|254780317|r 173 --------------------------------------------AGGKHKLLRTHTSPV---QIRVMESQD-LPIKVIVP 204 (366)
Q Consensus 173 --------------------------------------------~~~~~~lLRthTS~v---QiR~m~~~~-pP~~~~~~ 204 (366)
..++..+|||||||. +++.+.+++ +|+|+|++
T Consensus 151 ~~~~k~r~~l~~~G~~EvitySfvd~~~~~~~~~~~~p~~l~NPisse~sVLRThttpGlL~~l~~n~~r~~~piRlFei 230 (701)
T 2odr_C 151 LHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSI 230 (701)
T ss_dssp ---------------------------------------CCCCCCEEEEEEECCCTHHHHHHHHHHHTTTSCSCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 67665301121034102432023472332002565562002585530145617687466999999998579998499987
Q ss_pred CCCCCCCC--CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCE
Q ss_conf 57647454--4213781002005786178668999889999999970888662645423889852661036787505880
Q gi|254780317|r 205 GKTYRRDS--DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGI 282 (366)
Q Consensus 205 GrvyR~d~--D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~~~~ 282 (366)
|||||+|+ |+||+++|||+||+++|++++|.||||+++.|++++++ .++++|++++|||||+||.|+||+|..|
T Consensus 231 GrVFR~D~i~DatHl~~FhQ~EGlvvg~~Vdf~DLKgiLe~lL~~Lg~-~~vkfr~~~s~~Pf~hPg~eaeV~~~~~--- 306 (701)
T 2odr_C 231 DRCFRREQKEDKSHLMTYHSASCAIAGEGVDINDGKAIAEGLLSQFGF-TNFKFIPDEKKSKYYTPETQTEVYAYHP--- 306 (701)
T ss_dssp EEEECCCSCCCSSCCSEEEEEEEEEECTTCCHHHHHHHHHHHHHTTTC-CCEEEEECTTCCTTBCTTCCEEEEEEET---
T ss_pred EEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCEEEEEEEEEC---
T ss_conf 666725762425578424678999985886899999999999999678-7729996577889989913589999946---
Q ss_pred EEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHCC
Q ss_conf 42246883489845756388899856988000379963134469979973897058766358
Q gi|254780317|r 283 IKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFGAD 344 (366)
Q Consensus 283 ~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~~d 344 (366)
++++||||+||||+||+||+++||| |+|||||||||||||++|||+|||+||..+
T Consensus 307 ----~~~~WlEIgg~GmvhP~VL~~~GId---~~V~AfGLGLERLAMlkygI~DIR~L~~P~ 361 (701)
T 2odr_C 307 ----KLKEWLEVATFGVYSPVALSKYGID---VPVMNLGLGVERLAMISGNFADVREMVYPQ 361 (701)
T ss_dssp ----TTTEEEEEEEEEEBCHHHHHHTTCC---SCEEEEEEEHHHHHHHHTTCSCHHHHHCGG
T ss_pred ----CCCEEEEEECCCCCCHHHHHHCCCC---CCEEEEEECHHHHHHHHCCCCHHHHHHCCC
T ss_conf ----5994899965754079999876979---867999877899999873991777761577