HHsearch results for GI: 254780317 and protein with PDBid: 2odr_D
>2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis S2}
Probab=100.00 E-value=0 Score=519.03 Aligned_cols=274 Identities=19% Similarity=0.314 Sum_probs=223.6
Q ss_pred HHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 999876158998-8999999999999999999999999999856766676543100000112321226742389999999
Q gi|254780317|r 46 SSLLKDLKNLDS-QQVSARGAILNQLKVDISGKISARKDFIRNQLIFEQISSQSVDVSLPVFSSPCHRGRIHPVTQVIDE 124 (366)
Q Consensus 46 t~llK~Lk~Ls~-EeKk~~Gk~iNelK~~Ie~~i~~kk~~L~~~~~~~kl~~E~iDVTLP~~~~~~~~G~~HPItqvi~e 124 (366)
+...++.|-.+. ..+-+.|..+..++.+++.+.. ...+.+..+.+|+++|. .....|+.||+++++++
T Consensus 5 ~~~~~s~GL~~~~ShrFer~~~~Ela~ka~ErAw~---------~~~~il~~~~id~~~Pr--~~~~~Gk~HPI~~~Iee 73 (685)
T 2odr_D 5 HHHHHSSGLVPRGSHMFKREEIIEMANKDFEKAWI---------ETKDLIKAKKINESYPR--IKPVFGKTHPVNDTIEN 73 (685)
T ss_dssp ------------------CHHHHHHHHHCHHHHHH---------HHGGGSCCCCGGGSTTT--CCCCCCBCCHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHCCCCCCCCCCC--CCCCCCCCCHHHHHHHH
T ss_conf 54443578786056411133557777999999999---------75555067766645899--88887660758999999
Q ss_pred HHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECC--------------------------------
Q ss_conf 999998739876237234158898886189887733163312775056--------------------------------
Q gi|254780317|r 125 VTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGI-------------------------------- 172 (366)
Q Consensus 125 I~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~-------------------------------- 172 (366)
|++||.+|||++.+||.|+++ ||||+||+|++||||| ||||++..
T Consensus 74 IreIL~sLGFeE~~~p~Ive~-wnfD~LfvP~~HPaRD--DtFyLE~DliEEVaRiyGYdnIp~tlp~~~~~~~e~~e~~ 150 (685)
T 2odr_D 74 LRQAYLRMGFEEYINPVIVDE-RDIYKQFGPEAMAVLD--RCFYLAGLPRPDVGLSDEKISQIEKLGIKVSEHKESLQKI 150 (685)
T ss_dssp HHHHHHHTTCEECCCCSEEEH-HHHHHHHGGGHHHHHH--TCEEEEBCCC------------------------------
T ss_pred HHHHHHHCCCEEEECCEEEEE-EECCCCCCCCCCCHHH--CCEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 999999879889758947220-4053115899872531--8262057651022133453233100355555621335666
Q ss_pred --------------------------------------------CCCCCCCCCCCCCCH---HHHHHHHCC-CEEEEEEC
Q ss_conf --------------------------------------------665563224467630---555543036-31225410
Q gi|254780317|r 173 --------------------------------------------AGGKHKLLRTHTSPV---QIRVMESQD-LPIKVIVP 204 (366)
Q Consensus 173 --------------------------------------------~~~~~~lLRthTS~v---QiR~m~~~~-pP~~~~~~ 204 (366)
..++..+|||||||. |++.+.+++ +|+|+|++
T Consensus 151 ~~~~k~r~il~~~G~~EvitySFvs~~~~~~l~~~~~~i~L~NPisse~svLRThtspgll~~l~~n~~r~~~piRlFEi 230 (685)
T 2odr_D 151 LHGYKKGTLDGDDLVLEISNALEISSEMGLKILEDVFPEFKDLTAVSSKLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSI 230 (685)
T ss_dssp ---------------------------------------CCCCCCBCCSEEECCCTHHHHHHHHHHHTTTSCSCEEEEEE
T ss_pred HHHHHHCCHHHCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 66764031010245102442113473454321566562002585520255758877467999999998479998489964
Q ss_pred CCCCCCCC--CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCE
Q ss_conf 57647454--4213781002005786178668999889999999970888662645423889852661036787505880
Q gi|254780317|r 205 GKTYRRDS--DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFTEPSFEVDVRCSFSDGI 282 (366)
Q Consensus 205 GrvyR~d~--D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPftePs~Evdv~~~~~~~~ 282 (366)
|||||+|+ |+||+++|||+||+++|++++|.||||+++.|++++++ .++++|++++|||||+||.|+||+|..|
T Consensus 231 GrVFR~D~i~DatHl~efhQleGlivg~~Vdf~DLKgiLE~lL~~Lg~-~~vkfr~~~s~~Pf~hPg~eaeV~~~~~--- 306 (685)
T 2odr_D 231 DRCFRREQKEDKSHLMTYHSASCAIAGEGVDINDGKAIAEGLLSQFGF-TNFKFIPDEKKSKYYTPETQTEVYAYHP--- 306 (685)
T ss_dssp EEEECCCSCCCSSCCSEEEEEEEEEECTTCCHHHHHHHHHHHHHTTTC-CCEEEEECTTCCTTBCTTCCEEEEEEET---
T ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHCC-CCEEEEECCCCCCCCCCCEEEEEEEECC---
T ss_conf 677705775445457631458999996774799999999999998678-8739996667788879950279999806---
Q ss_pred EEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHCC
Q ss_conf 42246883489845756388899856988000379963134469979973897058766358
Q gi|254780317|r 283 IKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFGAD 344 (366)
Q Consensus 283 ~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~~d 344 (366)
++++||||+||||+||+||+++||| |+|||||||||||||++|||+|||+||..+
T Consensus 307 ----~~~~WlEIgg~G~vhP~VLk~~GId---~~V~AFGLGLERLAMlk~gI~DIR~L~~p~ 361 (685)
T 2odr_D 307 ----KLKEWLEVATFGVYSPVALSKYGID---VPVMNLGLGVERLAMISGNFADVREMVYPQ 361 (685)
T ss_dssp ----TTTEEEEEEEEEEBCHHHHHHTTCC---SCEEEEEEEHHHHHHHHTTCSCHHHHHCGG
T ss_pred ----CCCEEEEEEECCCCCHHHHHHCCCC---CCEEEEEECHHHHHHHHCCCCHHHHHCCCC
T ss_conf ----7983899980665079999876979---857999977899999873997377651567