HHsearch results for GI: 254780317 and protein with PDBid: 2zin_A

>2zin_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, pyrrolysine, ATP analogue, non-natural amino acid, unnatural amino acid, ATP-binding; HET: ANP LBY; 1.79A {Methanosarcina mazei} PDB: 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A*
Probab=100.00  E-value=7.7e-37  Score=288.71  Aligned_cols=203  Identities=19%  Similarity=0.239  Sum_probs=180.2

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHH
Q ss_conf             26742389999999999998739876237234158898886189887733163312775056665563224467630555
Q gi|254780317|r  111 HRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIR  190 (366)
Q Consensus       111 ~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR  190 (366)
                      ..|.+||++++++.|+++|.++||.+++.|.+++..+ |++.+.+.+||++++.|++       ++...||++++|.+.+
T Consensus        73 ~~~~~~~~~~i~~~ir~~f~~~Gf~EV~TP~l~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~lr~~~~~~~~~  144 (291)
T 2zin_A           73 AEERENYLGKLEREITRFFVDRGFLEIKSPILIPLEY-IERMGIDNDTELSKQIFRV-------DKNFCLRPMLAPNLYN  144 (291)
T ss_dssp             HTTCCCHHHHHHHHHHHHHHHTTCEEECCCSEEETHH-HHHTTCCTTSSGGGGCCEE-------TTTEEECSCSHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHCCCEEEECCCEEEECC-CCCCCCCCCCCCCCCEECC-------CCHHCCCCCCCCCHHH
T ss_conf             0013359999999999999988799997652233122-0136888774121213257-------8011266423451457


Q ss_pred             HHHH----CCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf             5430----363122541057647454-42137810020057861786689998899999999708886626454238898
Q gi|254780317|r  191 VMES----QDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEVSSLQMRFRPSFFPF  265 (366)
Q Consensus       191 ~m~~----~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPf  265 (366)
                      .+..    .+.|+|++.+|+|||+|. +++|.++|||+|+.++|.+++++||+++++.+++.+ |.+  ..+++++||||
T Consensus       145 ~~~~~~~~~~~p~r~f~ig~vfR~e~~~~~h~~eF~q~e~~~~~~~~~~~dl~~~~~~~l~~l-g~~--~~~~~~~~~~~  221 (291)
T 2zin_A          145 YLRKLDRALPDPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLESIITDFLNHL-GID--FKIVGDSCMVY  221 (291)
T ss_dssp             HHHHHTTTSCSSEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTTCCHHHHHHHHHHHHHHH-TCC--CEEECC-----
T ss_pred             HHHHHHHHCCCCCEEEEECCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHC-CCC--EEEECCCCCCC
T ss_conf             778776521334024664101220345678888638999999899997999999999999985-992--78713665676


Q ss_pred             CCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHHHHC
Q ss_conf             526610367875058804224688348984575638889985698800037996313446997997389705876635
Q gi|254780317|r  266 TEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRIAMLKYGMPDVREFFGA  343 (366)
Q Consensus       266 tePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRlaml~~gi~diR~~~~~  343 (366)
                      ++   .+|+.             .+|+|+++|||+||+|+++.|+|++   ++|||+|+||+||++||++|||..+.+
T Consensus       222 ~~---~~~~~-------------~~~~ei~~~~~~~~~v~~~~gid~p---~~~~g~g~erla~~~~~~~dir~~~r~  280 (291)
T 2zin_A          222 GD---TLDVM-------------HGDLELSSAVVGPIPLDREWGIDKP---WIGAGFGLERLLKVKHDFKNIKRAARS  280 (291)
T ss_dssp             CE---EEEEE-------------ETTEEEEEEEESCCGGGGGGTCCSC---EEEEEEEHHHHHHHHTTCSSGGGGSSC
T ss_pred             CC---CCCCC-------------CCCEEEECCCEECHHHHHHCCCCCC---EEEECCCHHHHHHHHCCCCCHHHHHHH
T ss_conf             76---60216-------------6875740386016999986699998---188675899999875299934555412