HHsearch results for GI: 254780317 and protein with PDBid: 3a74_A
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=98.99 E-value=1.8e-08 Score=81.40 Aligned_cols=105 Identities=17% Similarity=0.255 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCC-------CCCCEEEEECCCCCCCCCCCCCCCCHHH-
Q ss_conf 99999999999987398762372341588988861898877331-------6331277505666556322446763055-
Q gi|254780317|r 118 VTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPAR-------QMHDTFFVPGIAGGKHKLLRTHTSPVQI- 189 (366)
Q Consensus 118 Itqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPAR-------dmqDTFyl~~~~~~~~~lLRthTS~vQi- 189 (366)
=++++..|+++|.+.||..++-|-+... +..--|| .---++|+ .+||=+-
T Consensus 177 Rs~i~~~iR~fl~~~gFlEVeTP~L~~~---------~~~~~a~~f~~~~~~~~~~~~L-------------~~Spql~~ 234 (493)
T 3a74_A 177 RSLIIQSMRRYLDSHGYLEVETPMMHAV---------AGGAAARPFITHHNALDMTLYM-------------RIAIELHL 234 (493)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEESS---------CCSSSSCCCEEEETTTTEEEEE-------------CSCSHHHH
T ss_pred HHHHHHHHHHHHHHCCCCEECCCCCCEE---------CCCCCCCCCCCCCCCCCCCCCC-------------CCCCCHHH
T ss_conf 9999999999998659733317764100---------3786665520154468867433-------------67821578
Q ss_pred -HHHHHCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf -55430363122541057647454-421378100200578617866899988999999997
Q gi|254780317|r 190 -RVMESQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSF 248 (366)
Q Consensus 190 -R~m~~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~ 248 (366)
+.| .... =|++.+|+|||+|. +++|.|+|.|+|.-+.- ++..++...++.+++++
T Consensus 235 k~lm-v~g~-~rvfqI~~~FR~E~~~~~h~pEFT~le~e~af--~d~~d~m~~~E~l~~~i 291 (493)
T 3a74_A 235 KRLI-VGGL-EKVYEIGRVFRNEGISTRHNPEFTMLELYEAY--ADFRDIMKLTENLIAHI 291 (493)
T ss_dssp HHHH-HTTC-CEEEEEEEEECCCCCBTTBCSEEEEEEEEEET--CCHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHH-CCEEEEECEECCCCCCCCCCCHHHHHHHHHHH--CCHHHHHHHHHHHHHHH
T ss_conf 9888-7410-54789700035787887886066877888763--37988998899999999