HHsearch results for GI: 254780317 and protein with PDBid: 3a74_A

>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=98.99  E-value=1.8e-08  Score=81.40  Aligned_cols=105  Identities=17%  Similarity=0.255  Sum_probs=68.2

Q ss_pred             HHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCC-------CCCCEEEEECCCCCCCCCCCCCCCCHHH-
Q ss_conf             99999999999987398762372341588988861898877331-------6331277505666556322446763055-
Q gi|254780317|r  118 VTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPAR-------QMHDTFFVPGIAGGKHKLLRTHTSPVQI-  189 (366)
Q Consensus       118 Itqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPAR-------dmqDTFyl~~~~~~~~~lLRthTS~vQi-  189 (366)
                      =++++..|+++|.+.||..++-|-+...         +..--||       .---++|+             .+||=+- 
T Consensus       177 Rs~i~~~iR~fl~~~gFlEVeTP~L~~~---------~~~~~a~~f~~~~~~~~~~~~L-------------~~Spql~~  234 (493)
T 3a74_A          177 RSLIIQSMRRYLDSHGYLEVETPMMHAV---------AGGAAARPFITHHNALDMTLYM-------------RIAIELHL  234 (493)
T ss_dssp             HHHHHHHHHHHHHHTTCEECCCCSEESS---------CCSSSSCCCEEEETTTTEEEEE-------------CSCSHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCEECCCCCCEE---------CCCCCCCCCCCCCCCCCCCCCC-------------CCCCCHHH
T ss_conf             9999999999998659733317764100---------3786665520154468867433-------------67821578


Q ss_pred             -HHHHHCCCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf             -55430363122541057647454-421378100200578617866899988999999997
Q gi|254780317|r  190 -RVMESQDLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSF  248 (366)
Q Consensus       190 -R~m~~~~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~  248 (366)
                       +.| .... =|++.+|+|||+|. +++|.|+|.|+|.-+.-  ++..++...++.+++++
T Consensus       235 k~lm-v~g~-~rvfqI~~~FR~E~~~~~h~pEFT~le~e~af--~d~~d~m~~~E~l~~~i  291 (493)
T 3a74_A          235 KRLI-VGGL-EKVYEIGRVFRNEGISTRHNPEFTMLELYEAY--ADFRDIMKLTENLIAHI  291 (493)
T ss_dssp             HHHH-HTTC-CEEEEEEEEECCCCCBTTBCSEEEEEEEEEET--CCHHHHHHHHHHHHHHH
T ss_pred             HHHH-HHHH-CCEEEEECEECCCCCCCCCCCHHHHHHHHHHH--CCHHHHHHHHHHHHHHH
T ss_conf             9888-7410-54789700035787887886066877888763--37988998899999999