HHsearch results for GI: 254780317 and protein with PDBid: 3err_A
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus}
Probab=97.28 E-value=0.011 Score=39.09 Aligned_cols=185 Identities=15% Similarity=0.215 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHH------HH
Q ss_conf 999999999873987623723415889888618988773316331277505666556322446763055554------30
Q gi|254780317|r 121 VIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKHKLLRTHTSPVQIRVM------ES 194 (366)
Q Consensus 121 vi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~~lLRthTS~vQiR~m------~~ 194 (366)
.++-..++..+-||+.+.-|.+-...--+..=..|+ ..-|.|-+++ +++-|. -||-|.+-.| ..
T Consensus 281 L~~f~ld~~~~~gy~~v~~P~~v~~~~~~gtG~lp~-----f~~~~y~~~~----~~~~Li-pTaEv~l~~~~~~~i~~~ 350 (536)
T 3err_A 281 LLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPA-----YRDQVWAIAE----TDLYLT-GTAEVVLNALHSGEILPY 350 (536)
T ss_dssp HHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTT-----TGGGCCEETT----TTEEEC-SSTHHHHHHHTTTCEEEG
T ss_pred HHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHCCCCC-----CHHHHHHHCC----HHHHCC-CCCCCCHHHHHHHHHCCH
T ss_conf 999999999760450230102224665522247853-----0245554200----231015-666420344540754748
Q ss_pred CCCEEEEEECCCCCCCCC----CCC----CCCCCCCCCEEEECCC------CCHHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 363122541057647454----421----3781002005786178------66899988999999997088866264542
Q gi|254780317|r 195 QDLPIKVIVPGKTYRRDS----DST----HSPMFHQIEGLVVSDS------ATIANLRWVLESFCKSFFEVSSLQMRFRP 260 (366)
Q Consensus 195 ~~pP~~~~~~GrvyR~d~----D~t----H~~~FhQ~egl~v~~~------i~~~~lk~~l~~~~~~~fg~~~~~~r~rp 260 (366)
...|+|+++.++|||++. -.| +.|+|.++|.+++-+. --+..+....+.++..+ | +-||-
T Consensus 351 ~~LP~~~~~~s~cfR~Eag~~g~dtrGL~RvhQF~KvE~~~~~~~~~e~s~~~~~~~l~~~e~i~~~L-~-----lpyrv 424 (536)
T 3err_A 351 EALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLL-E-----LPYRL 424 (536)
T ss_dssp GGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHT-T-----CCEEE
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHC-C-----CCEEE
T ss_conf 65897655469824555565575442133313431489998536513457999999999999997424-8-----85599
Q ss_pred CCCC----CCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCC---CCCCEEEEE-----EECCHHHHH
Q ss_conf 3889----8526610367875058804224688348984575638889985698---800037996-----313446997
Q gi|254780317|r 261 SFFP----FTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGI---DPDIYQGFA-----WGMGLDRIA 328 (366)
Q Consensus 261 ~~fP----ftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~---d~~~~~g~A-----fG~G~eRla 328 (366)
..-| +.--+.-+||..+..+ .+.|.||..|-...--.-+..+| |++.-+.|+ =+++++|+.
T Consensus 425 v~~~~~dlg~~a~~kyDiE~w~P~-------~~~y~Ev~S~Snc~DfqsrRl~iry~~~~g~~~~~htlngt~~a~~R~l 497 (536)
T 3err_A 425 VEVATGDMGPGKWRQVDIEVYLPS-------EGRYRETHSCSALLDWQARRANLRYRDPEGRVRYAYTLNNTALATPRIL 497 (536)
T ss_dssp EECCTTTSCTTCSEEEEEEEEEGG-------GTEEEEEEEEEEEETHHHHHHTCEEECTTSCEEECEEEEEEEEEETHHH
T ss_pred EECCCCCCCHHHHHHCCEEEEECC-------CCCEEEEECHHCHHHHHHHHCCCEEECCCCCEEEEEEECCCCHHHHHHH
T ss_conf 967777688678752451898548-------7987757311010118888547888889998874688207510888999