HHsearch results for GI: 254780317 and protein with PDBid: 3ial_A

>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=92.81  E-value=0.62  Score=26.26  Aligned_cols=204  Identities=16%  Similarity=0.162  Sum_probs=104.0

Q ss_pred             HHHCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCEEECCCEEE--------CHHH-HHHHHCCCCCCCCCCCCC
Q ss_conf             4310000011232122-67423899999999999987398762372341--------5889-888618988773316331
Q gi|254780317|r   96 SQSVDVSLPVFSSPCH-RGRIHPVTQVIDEVTCIFMDMGFALEEGSDIE--------TDYY-NFAALNFPDDHPARQMHD  165 (366)
Q Consensus        96 ~E~iDVTLP~~~~~~~-~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIE--------td~~-NFdaLNiP~~HPARdmqD  165 (366)
                      ++-+|-..|+.|-... +=+......+.+.+++.+..+||+.+.-|-+-        ++.| .|.-             +
T Consensus        35 a~l~d~~~~v~G~~~~lP~G~~i~~~i~~~~~~~~~~~G~~ev~~P~l~p~~~l~k~sgh~e~f~~-------------e  101 (518)
T 3ial_A           35 AELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEA-------------E  101 (518)
T ss_dssp             TTCEETTSSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGG-------------G
T ss_pred             CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCC-------------C
T ss_conf             477014899980189771099999999999999999859979989760678999988677010263-------------4


Q ss_pred             EEEEECCC---CCCCCCCCCCCCCHHHHHH----HH-CCCEEEEEECCCCCCCCC-CC---CCCCCCCCCCEEEECCCCC
Q ss_conf             27750566---6556322446763055554----30-363122541057647454-42---1378100200578617866
Q gi|254780317|r  166 TFFVPGIA---GGKHKLLRTHTSPVQIRVM----ES-QDLPIKVIVPGKTYRRDS-DS---THSPMFHQIEGLVVSDSAT  233 (366)
Q Consensus       166 TFyl~~~~---~~~~~lLRthTS~vQiR~m----~~-~~pP~~~~~~GrvyR~d~-D~---tH~~~FhQ~egl~v~~~i~  233 (366)
                      -|+++...   .++...||.-+-+.....+    .+ .+.|+++.-.|+|||++. ..   ..+.+|+|.||-....+  
T Consensus       102 mf~v~~~~~~~~~e~~~LrPt~e~~~~~~~~~~i~SyrdLPl~i~Q~g~~fR~E~~~~~gllR~REF~~~E~ht~~~~--  179 (518)
T 3ial_A          102 CFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHAT--  179 (518)
T ss_dssp             CEEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESS--
T ss_pred             CEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHEEEHHHCCCCCCC--
T ss_conf             469844886555661776358879999999544576555681445531010122345640002021426423132147--


Q ss_pred             HHHHHHHHHH---HHHHHCC----CCCCEEEEEEC-CCC--CCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHH
Q ss_conf             8999889999---9999708----88662645423-889--852661036787505880422468834898457563888
Q gi|254780317|r  234 IANLRWVLES---FCKSFFE----VSSLQMRFRPS-FFP--FTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPR  303 (366)
Q Consensus       234 ~~~lk~~l~~---~~~~~fg----~~~~~~r~rp~-~fP--ftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~  303 (366)
                      ..+....+..   .+..+|.    ....+.+-... -|+  +..|..|+.+            ..+.+++++.+--..-+
T Consensus       180 ~eea~~~~~~~~~~y~~~~~~~l~i~~~~~~~~~~~k~~~a~y~~~iE~~~------------~~g~~~q~gtt~~Lg~~  247 (518)
T 3ial_A          180 AEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVM------------PCGRVLQTAGIHNLGQR  247 (518)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCCCCEEEEECGGGCCTTCSEEEEEEEEC------------TTSCEEEEEEEEEEETH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHH------------HHCCCCCCCCEEECCCC
T ss_conf             888876655556777764311121320011133787548952331177887------------63367341017855110


Q ss_pred             HHHHCCCC---CC-----CEEEEEEECCHHHHH
Q ss_conf             99856988---00-----037996313446997
Q gi|254780317|r  304 VLRGVGID---PD-----IYQGFAWGMGLDRIA  328 (366)
Q Consensus       304 vl~~~g~d---~~-----~~~g~AfG~G~eRla  328 (366)
                      --+..++.   ++     .+.+ -||+ ++|+.
T Consensus       248 fsk~f~i~y~d~~g~~~~~~~~-s~Gi-~~Rli  278 (518)
T 3ial_A          248 FSSTFDILYANKANESVHPYLT-CAGI-STRVL  278 (518)
T ss_dssp             HHHHTTCCEECTTCCEECCEEE-EEEE-ETHHH
T ss_pred             CCCCCEEEEECCCCCEEEEEEE-ECCH-HHHHH
T ss_conf             5633226999899967543211-0221-46799