HHsearch results for GI: 254780317 and protein with PDBid: 3ial_A
>3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, Pro(Cys)RS, translation, ATP-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803}
Probab=92.81 E-value=0.62 Score=26.26 Aligned_cols=204 Identities=16% Similarity=0.162 Sum_probs=104.0
Q ss_pred HHHCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHCCCEEECCCEEE--------CHHH-HHHHHCCCCCCCCCCCCC
Q ss_conf 4310000011232122-67423899999999999987398762372341--------5889-888618988773316331
Q gi|254780317|r 96 SQSVDVSLPVFSSPCH-RGRIHPVTQVIDEVTCIFMDMGFALEEGSDIE--------TDYY-NFAALNFPDDHPARQMHD 165 (366)
Q Consensus 96 ~E~iDVTLP~~~~~~~-~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIE--------td~~-NFdaLNiP~~HPARdmqD 165 (366)
++-+|-..|+.|-... +=+......+.+.+++.+..+||+.+.-|-+- ++.| .|.- +
T Consensus 35 a~l~d~~~~v~G~~~~lP~G~~i~~~i~~~~~~~~~~~G~~ev~~P~l~p~~~l~k~sgh~e~f~~-------------e 101 (518)
T 3ial_A 35 AELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEA-------------E 101 (518)
T ss_dssp TTCEETTSSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGG-------------G
T ss_pred CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCC-------------C
T ss_conf 477014899980189771099999999999999999859979989760678999988677010263-------------4
Q ss_pred EEEEECCC---CCCCCCCCCCCCCHHHHHH----HH-CCCEEEEEECCCCCCCCC-CC---CCCCCCCCCCEEEECCCCC
Q ss_conf 27750566---6556322446763055554----30-363122541057647454-42---1378100200578617866
Q gi|254780317|r 166 TFFVPGIA---GGKHKLLRTHTSPVQIRVM----ES-QDLPIKVIVPGKTYRRDS-DS---THSPMFHQIEGLVVSDSAT 233 (366)
Q Consensus 166 TFyl~~~~---~~~~~lLRthTS~vQiR~m----~~-~~pP~~~~~~GrvyR~d~-D~---tH~~~FhQ~egl~v~~~i~ 233 (366)
-|+++... .++...||.-+-+.....+ .+ .+.|+++.-.|+|||++. .. ..+.+|+|.||-....+
T Consensus 102 mf~v~~~~~~~~~e~~~LrPt~e~~~~~~~~~~i~SyrdLPl~i~Q~g~~fR~E~~~~~gllR~REF~~~E~ht~~~~-- 179 (518)
T 3ial_A 102 CFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHAT-- 179 (518)
T ss_dssp CEEEEEETTEEEEEEEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESS--
T ss_pred CEEEECCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHEEEHHHCCCCCCC--
T ss_conf 469844886555661776358879999999544576555681445531010122345640002021426423132147--
Q ss_pred HHHHHHHHHH---HHHHHCC----CCCCEEEEEEC-CCC--CCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHH
Q ss_conf 8999889999---9999708----88662645423-889--852661036787505880422468834898457563888
Q gi|254780317|r 234 IANLRWVLES---FCKSFFE----VSSLQMRFRPS-FFP--FTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPR 303 (366)
Q Consensus 234 ~~~lk~~l~~---~~~~~fg----~~~~~~r~rp~-~fP--ftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~ 303 (366)
..+....+.. .+..+|. ....+.+-... -|+ +..|..|+.+ ..+.+++++.+--..-+
T Consensus 180 ~eea~~~~~~~~~~y~~~~~~~l~i~~~~~~~~~~~k~~~a~y~~~iE~~~------------~~g~~~q~gtt~~Lg~~ 247 (518)
T 3ial_A 180 AEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRVCWDRFPGADYSEVSDVVM------------PCGRVLQTAGIHNLGQR 247 (518)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCCCEEEEECGGGCCTTCSEEEEEEEEC------------TTSCEEEEEEEEEEETH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCCCHHHHHH------------HHCCCCCCCCEEECCCC
T ss_conf 888876655556777764311121320011133787548952331177887------------63367341017855110
Q ss_pred HHHHCCCC---CC-----CEEEEEEECCHHHHH
Q ss_conf 99856988---00-----037996313446997
Q gi|254780317|r 304 VLRGVGID---PD-----IYQGFAWGMGLDRIA 328 (366)
Q Consensus 304 vl~~~g~d---~~-----~~~g~AfG~G~eRla 328 (366)
--+..++. ++ .+.+ -||+ ++|+.
T Consensus 248 fsk~f~i~y~d~~g~~~~~~~~-s~Gi-~~Rli 278 (518)
T 3ial_A 248 FSSTFDILYANKANESVHPYLT-CAGI-STRVL 278 (518)
T ss_dssp HHHHTTCCEECTTCCEECCEEE-EEEE-ETHHH
T ss_pred CCCCCEEEEECCCCCEEEEEEE-ECCH-HHHHH
T ss_conf 5633226999899967543211-0221-46799