HHsearch results for GI: 254780317 and protein with PDBid: 3l4g_B
>3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens}
Probab=99.25 E-value=7.5e-10 Score=91.42 Aligned_cols=205 Identities=12% Similarity=0.166 Sum_probs=146.9
Q ss_pred HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 10000011232122674238999999999999873987623723415889888618988773316331277505666556
Q gi|254780317|r 98 SVDVSLPVFSSPCHRGRIHPVTQVIDEVTCIFMDMGFALEEGSDIETDYYNFAALNFPDDHPARQMHDTFFVPGIAGGKH 177 (366)
Q Consensus 98 ~iDVTLP~~~~~~~~G~~HPItqvi~eI~~IF~~lGF~v~eGPEIEtd~~NFdaLNiP~~HPARdmqDTFyl~~~~~~~~ 177 (366)
++-.++|. ....|..+|..+..+.+++.+.++||..+-..-..+.-..++..+.+. +. .+..-+.++-..+.
T Consensus 376 nI~~~~p~---~~~~~~~~~~~~~~~~ir~~L~~~Gf~E~itysf~s~~~~~~~~~~~~--~~---~~~v~l~NPis~e~ 447 (589)
T 3l4g_B 376 NIQMTLPK---TYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDI--SA---TKAVHISNPKTAEF 447 (589)
T ss_dssp GSCCCCCC---CCCCCCCCHHHHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCT--TS---SCCCBBSSCSSGGG
T ss_pred CCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCC--CC---CCEEEEECCCCHHH
T ss_conf 26666776---445565785799999999999971212202002569899987635566--65---64289608753444
Q ss_pred CCCCCCCCCHHHHHHHHC---CCEEEEEECCCCCCCCC-CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCC--
Q ss_conf 322446763055554303---63122541057647454-421378100200578617866899988999999997088--
Q gi|254780317|r 178 KLLRTHTSPVQIRVMESQ---DLPIKVIVPGKTYRRDS-DSTHSPMFHQIEGLVVSDSATIANLRWVLESFCKSFFEV-- 251 (366)
Q Consensus 178 ~lLRthTS~vQiR~m~~~---~pP~~~~~~GrvyR~d~-D~tH~~~FhQ~egl~v~~~i~~~~lk~~l~~~~~~~fg~-- 251 (366)
.+|||.--|.-++++..| +.|+|+|=.|+||..|. ..+-..+...+-+++.+++.+|.++||.++.++..+ |.
T Consensus 448 s~lR~sLlp~LL~~~~~N~~~~~~~~lFEiG~Vf~~~~~~~~~~~~~~~l~~~~~~~~~~f~~~kg~~e~ll~~l-~i~~ 526 (589)
T 3l4g_B 448 QVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVIKDSNTDVGAKNYRHLCAVYYNKNPGFEIIHGLLDRIMQLL-DVPP 526 (589)
T ss_dssp SEECSCSHHHHHHHHHHTTTSCSCEEEEEEEEEEEECTTSTTSEEEEEEEEEEEESSSCCHHHHHHHHHHHHHHT-TCCB
T ss_pred HHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEECCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCC
T ss_conf 442025768899999973167997679973144726886434530114788997089999999999999999872-9974
Q ss_pred --CCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCHHHH
Q ss_conf --8662645423889852661036787505880422468834898457563888998569880003799631344699
Q gi|254780317|r 252 --SSLQMRFRPSFFPFTEPSFEVDVRCSFSDGIIKFDEGTEWMEILGCGMVDPRVLRGVGIDPDIYQGFAWGMGLDRI 327 (366)
Q Consensus 252 --~~~~~r~rp~~fPftePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~Gm~~p~vl~~~g~d~~~~~g~AfG~G~eRl 327 (366)
......++++-.|+-.|+--.+|.+ +| -.||-.|.+||+|+++.+++.++ ++|=+-+|.|
T Consensus 527 ~~~~~~~~~~~~~~~~~hPgrsA~I~~---~g----------~~iG~iGelhP~v~~~~~l~~~v---~~~Eidl~~L 588 (589)
T 3l4g_B 527 GEDKGGYVIKASEGPAFFPGRCAEIFA---RG----------QSVGKLGVLHPDVITKFELTMPC---SSLEINIGPF 588 (589)
T ss_dssp STTTTSEEEEECCCTTEEEEEEEEEEE---TT----------EEEEEEEEECHHHHHHTTCCSCE---EEEEEECGGG
T ss_pred CCCCCCEEEECCCCCCCCCCCEEEEEE---CC----------CEEEEEEEECHHHHHHCCCCCCE---EEEEEEHHHH
T ss_conf 456663799648788768987699999---99----------49999999989999972979976---9999993682