HHsearch results for GI: 254780317 and protein with PDBid: 3mf2_A

>3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A*
Probab=98.04  E-value=0.00046  Score=49.09  Aligned_cols=126  Identities=10%  Similarity=0.138  Sum_probs=74.2

Q ss_pred             CCCEEEEEECCCCCCCCC--CCCCCCCCCCCCEEEECCCC----CHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCC--
Q ss_conf             363122541057647454--42137810020057861786----6899988999999997088866264542388985--
Q gi|254780317|r  195 QDLPIKVIVPGKTYRRDS--DSTHSPMFHQIEGLVVSDSA----TIANLRWVLESFCKSFFEVSSLQMRFRPSFFPFT--  266 (366)
Q Consensus       195 ~~pP~~~~~~GrvyR~d~--D~tH~~~FhQ~egl~v~~~i----~~~~lk~~l~~~~~~~fg~~~~~~r~rp~~fPft--  266 (366)
                      .+.|+++...|.|||+|.  .-.+..+|.|.|...++..=    .+..++.....+++. ||-.   .|....-=||-  
T Consensus       165 ~dlP~~~~~~~~~fR~E~~~Gl~R~reF~~~E~~~f~~~e~~~~~~~~~~~~~~~i~~~-LgL~---~~~~~a~d~~~gd  240 (346)
T 3mf2_A          165 PKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRERWMVRAQAIARD-LGLT---FRVDYASDPFFGR  240 (346)
T ss_dssp             CTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHHHHHHHHHHHHHHH-TTCC---CEEEECCCCCCHH
T ss_pred             CCCCEEEEEECCEEECCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHH-CCCC---EEEEECCCCCCCC
T ss_conf             13487999974788378999993237789999999985899999999999999999998-7997---6999825888874


Q ss_pred             ----------CCCCEEEEEEECCCCEEEECCCCCEEEEECC---CCCCHHHHHHCCCCCC-CEEEEEEECCHHHHHHHHC
Q ss_conf             ----------2661036787505880422468834898457---5638889985698800-0379963134469979973
Q gi|254780317|r  267 ----------EPSFEVDVRCSFSDGIIKFDEGTEWMEILGC---GMVDPRVLRGVGIDPD-IYQGFAWGMGLDRIAMLKY  332 (366)
Q Consensus       267 ----------ePs~Evdv~~~~~~~~~~~~~~~~WiEi~g~---Gm~~p~vl~~~g~d~~-~~~g~AfG~G~eRlaml~~  332 (366)
                                +-....|+..+..       ..++|+||+.+   |=.-|+-+..-..|.+ .++| -+|+|+||++....
T Consensus       241 ~g~~~~~~~~~~~~k~d~e~~~p-------~~~~~~evgsi~~~gd~~~~r~~i~~~d~~~~h~~-~~G~g~eR~v~ali  312 (346)
T 3mf2_A          241 VGQMKAVSQKQQQLKFELLIPLR-------SEEQPTACMSFNYHREHFGTTWGIQDANGEPAHTG-CVAFGMDRLAVAMF  312 (346)
T ss_dssp             HHHHHHHHHHHTTCEEEEEECSS-------CSSSCEEEEEEEECTTHHHHHHTCBCTTSSBCEEE-EEEEEHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCCCEEEEEECC-------CCCCEEEEEEEEECCCCCCCCCCCEEECCCEEEEC-CCCCHHHHHHHHHH
T ss_conf             41487763322032479999808-------99977888316414775673359888189978876-77465999999999