HHsearch results for GI: 254780318 and protein with PDBid: 2ftc_L
>2ftc_L MRPL20 protein; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus}
Probab=100.00 E-value=0 Score=311.33 Aligned_cols=112 Identities=37% Similarity=0.531 Sum_probs=110.2
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Q ss_conf 56655568998999974131564523699999999999999874699889999999998677999971899999999999
Q gi|254780318|r 5 KRGVVSSAKHKKVLKSAKGFYGRRKNTIRAAKAAVDRSQQYAYRDRRVKKRDFRSLWIQRINAAVRVYDLNYSQFINGLH 84 (123)
Q Consensus 5 k~g~~~~~rrkkilk~akGfrG~r~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~r~~g~sYS~fi~~L~ 84 (123)
.+|+++++|||+||++||||+|++|+||++|+|+|+|||+|||+||+.+||+||+|||+|||||+|++|+|||+||++|+
T Consensus 5 ~Rg~~~~~Rrkkilk~AkGf~G~~s~~~r~A~q~v~kAl~yayrdRk~kKR~fR~LWI~RINAa~R~~g~sYS~fi~~Lk 84 (118)
T 2ftc_L 5 NRVTDRYFRIQEVLKHARHFRGRKNRCYRLAVRTVIRAFVKCTKARYLKKKNMRTLWINRITAASQEHGLKYPALIGNLV 84 (118)
T ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf 55723899999999982656677655089999999999999983589999999999999999999867998999999999
Q ss_pred HCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 62986468999999741989999999999998
Q gi|254780318|r 85 KAGIVLDRKVLSDLAITQLDSFKKIVELSRSR 116 (123)
Q Consensus 85 ~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~ 116 (123)
++||.|||||||||||+||.+|++||+++|++
T Consensus 85 ~~~I~LnRKvLs~LAi~dp~sF~~lv~~ak~~ 116 (118)
T 2ftc_L 85 KCQVELNRKVLADLAIYEPKTFKSLAALASRR 116 (118)
T ss_pred HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 91896649999999951999999999999871