HHsearch results for GI: 254780318 and protein with PDBid: 2ghj_A
>2ghj_A 50S ribosomal protein L20; folding intermediate, ribosomal protein extension, structural protein; 2.90A {Aquifex aeolicus} PDB: 1gyz_A
Probab=100.00 E-value=0 Score=324.82 Aligned_cols=118 Identities=55% Similarity=0.882 Sum_probs=115.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 87756655568998999974131564523699999999999999874699889999999998677999971899999999
Q gi|254780318|r 2 TRVKRGVVSSAKHKKVLKSAKGFYGRRKNTIRAAKAAVDRSQQYAYRDRRVKKRDFRSLWIQRINAAVRVYDLNYSQFIN 81 (123)
Q Consensus 2 ~Rvk~g~~~~~rrkkilk~akGfrG~r~~~~r~A~~~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~r~~g~sYS~fi~ 81 (123)
.||+ |+++++||++||++|+||+|++|+||++|+|+|+|||+|||+||+.+||+||+|||+|||||+|++|+|||+||+
T Consensus 1 mRvk-G~~ar~rrkkilk~akGf~G~~s~~~r~A~q~v~kAl~yayrdRk~kKr~fR~LWI~RINAa~R~~g~sYs~fi~ 79 (118)
T 2ghj_A 1 MRVK-GPSSRRKKKKILKLAKGYRGQRSRSYRRAKEAVMRALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFIN 79 (118)
T ss_dssp ------------------CCSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CCCC-CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 9976-178899999999980625777655089999999999999995599999999999999999999990998999999
Q ss_pred HHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999629864689999997419899999999999985565
Q gi|254780318|r 82 GLHKAGIVLDRKVLSDLAITQLDSFKKIVELSRSRLLVD 120 (123)
Q Consensus 82 ~L~~~~i~LnRKvLa~LAi~dp~~F~~lv~~ak~~l~~~ 120 (123)
||++++|.|||||||||||+||.+|++||+++|++|+++
T Consensus 80 ~L~~~~I~LnRKvLa~lAi~dp~sF~~lv~~~k~~l~~~ 118 (118)
T 2ghj_A 80 GLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEALQVQ 118 (118)
T ss_dssp HHTTTTCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 999918977499999999709999999999999975579