HHsearch alignment for GI: 254780319 and conserved domain: COG0291
>COG0291 RpmI Ribosomal protein L35 [Translation, ribosomal structure and biogenesis].
Probab=99.93 E-value=6.5e-27 Score=151.76 Aligned_cols=64 Identities=50% Similarity=0.672 Sum_probs=61.6
Q ss_pred CCCCCCCCHHHEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHHCCC
Q ss_conf 98732330121225775998097032488525415880465414698683777899999985868
Q gi|254780319|r 1 MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN 65 (67)
Q Consensus 1 MPKmKT~k~akKRFk~T~sGKvkr~~agk~H~l~~Ks~krkR~lr~~~~v~~~~~~~i~r~llPY 65 (67)
T Consensus 1 MPKmKT~k~aaKRFK~T~~Gkikr~~A~k~H~l~kKs~k~kR~Lr~~~~v~~~d~k~v~~-~l~~ 64 (65)
T COG0291 1 MPKMKTKKGAAKRFKITGTGKIKRKHAGKRHILTKKSTKRKRHLRKTAVVSKADLKRVKR-LLLY 64 (65)
T ss_pred CCCCCHHHHHHHHEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCEECHHHHHHHHH-HCCC
T ss_conf 985201165575246657886873325520004467778898446886056889999998-6368