HHsearch results for GI: 254780319 and protein with PDBid: 2j01_8

>2j01_8 50S ribosomal protein L35; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: d.301.1.1 PDB: 1vsp_a 2hgj_7 2hgq_7 2hgu_7 1vsa_a 2j03_8 2jl6_8 2jl8_8 2v47_8 2v49_8 2wdi_8 2wdj_8 2wdl_8 2wdn_8 2wh2_8 2wh4_8 2wrj_8 2wrl_8 2wro_8 2wrr_8 ...

Probab=99.94  E-value=1.2e-28  Score=159.23  Aligned_cols=64  Identities=47%  Similarity=0.612  Sum_probs=62.6

Q ss_pred             CCCCCCCCHHHEEEEECCCCEEEECCCCCCCCCCCCCCHHHHHCCCCEEECHHHHHHHHHHHCCC
Q ss_conf             98732330121225775998097032488525415880465414698683777899999985868
Q gi|254780319|r    1 MPKMKTNSSSKKRFSITATGKVRAQAAGKRHGMIKRSNKFIRNARGTMVLASADAKKVIRNYLPN   65 (67)
Q Consensus         1 MPKmKT~k~akKRFk~T~sGKvkr~~agk~H~l~~Ks~krkR~lr~~~~v~~~~~~~i~r~llPY   65 (67)
                      |||||||+||+|||++||||||++++||++|+++++|.+++|+|+++.+|+++|.++|.+ ||||
T Consensus         1 MPKmKT~k~a~KRfkvT~sGKi~r~~ag~~H~l~~Ks~k~kR~lr~~~~v~~~~~k~ik~-lLPY   64 (65)
T 2j01_8            1 MPKMKTHKGAKKRVKITASGKVVAMKTGKRHLNWQKSGKEIRQKGRKFVLAKPEAERIKL-LLPY   64 (65)
T ss_dssp             -CCCCCCHHHHHHCEECSSSCEEECCTTTTTCSSCSCCSTTTSCSCEECCSSHHHHHHTT-TTTC
T ss_pred             CCCCCCCHHHHHEEEECCCCCEEECCCCCCCCCCCCCHHHHHHCCCCEEECHHHHHHHHH-HCCC
T ss_conf             997643211351157768987874416777765448888898657985587999999998-3899