cmd.read_pdbstr(""""\ HEADER SCOP/ASTRAL domain d2zjr31 [154551] 02-JUN-09 0000 \ REMARK 99 \ REMARK 99 ASTRAL ASTRAL-version: 1.75 \ REMARK 99 ASTRAL SCOP-sid: d2zjr31 \ REMARK 99 ASTRAL SCOP-sun: 154551 \ REMARK 99 ASTRAL SCOP-sccs: d.301.1.1 \ REMARK 99 ASTRAL Source-PDB: 2zjr \ REMARK 99 ASTRAL Source-PDB-REVDAT: 17-JUN-08 \ REMARK 99 ASTRAL Region: 3:2-64 \ REMARK 99 ASTRAL ASTRAL-SPACI: 0.10 \ REMARK 99 ASTRAL ASTRAL-AEROSPACI: 0.10 \ REMARK 99 ASTRAL Data-updated-release: 1.75 \ ATOM 83453 CA PRO 3 2 22.508 149.443 73.655 1.00 34.77 C \ ATOM 83454 CA LYS 3 3 25.821 147.687 72.894 1.00 33.22 C \ ATOM 83455 CA MET 3 4 28.042 150.715 72.293 1.00 35.18 C \ ATOM 83456 CA LYS 3 5 30.609 150.826 69.466 1.00 34.84 C \ ATOM 83457 CA THR 3 6 34.218 150.579 70.639 1.00 32.29 C \ ATOM 83458 CA HIS 3 7 35.625 153.862 69.357 1.00 31.87 C \ ATOM 83459 CA LYS 3 8 39.095 152.339 69.660 1.00 33.94 C \ ATOM 83460 CA MET 3 9 38.243 150.418 66.498 1.00 34.58 C \ ATOM 83461 CA ALA 3 10 36.638 153.306 64.626 1.00 35.91 C \ ATOM 83462 CA LYS 3 11 39.110 154.930 62.227 1.00 37.64 C \ ATOM 83463 CA ARG 3 12 41.173 151.902 63.215 1.00 33.60 C \ ATOM 83464 CA ARG 3 13 42.148 149.076 60.871 1.00 35.27 C \ ATOM 83465 CA ILE 3 14 38.576 147.744 61.161 1.00 37.47 C \ ATOM 83466 CA LYS 3 15 36.479 148.001 58.008 1.00 34.33 C \ ATOM 83467 CA ILE 3 16 33.295 146.032 57.417 1.00 34.39 C \ ATOM 83468 CA THR 3 17 33.306 144.777 53.786 1.00 32.44 C \ ATOM 83469 CA GLY 3 18 29.908 145.186 52.201 1.00 33.79 C \ ATOM 83470 CA THR 3 19 29.862 141.409 52.134 1.00 36.83 C \ ATOM 83471 CA GLY 3 20 30.541 141.195 55.857 1.00 38.75 C \ ATOM 83472 CA LYS 3 21 34.314 140.732 55.963 1.00 39.75 C \ ATOM 83473 CA VAL 3 22 36.723 142.694 58.217 1.00 40.04 C \ ATOM 83474 CA MET 3 23 39.497 144.928 56.959 1.00 36.20 C \ ATOM 83475 CA ALA 3 24 42.517 146.365 58.712 1.00 37.72 C \ ATOM 83476 CA PHE 3 25 45.675 148.312 57.906 1.00 34.77 C \ ATOM 83477 CA LYS 3 26 49.042 146.578 57.846 1.00 35.02 C \ ATOM 83478 CA SER 3 27 50.825 147.174 61.156 1.00 40.04 C \ ATOM 83479 CA GLY 3 28 54.146 146.036 59.764 1.00 44.18 C \ ATOM 83480 CA LYS 3 29 56.838 148.573 60.571 1.00 44.58 C \ ATOM 83481 CA ARG 3 30 54.290 151.321 60.795 1.00 47.82 C \ ATOM 83482 CA HIS 3 31 56.563 154.293 61.209 1.00 45.74 C \ ATOM 83483 CA GLN 3 32 59.525 154.387 63.592 1.00 45.12 C \ ATOM 83484 CA ASN 3 33 61.978 151.611 62.849 1.00 44.44 C \ ATOM 83485 CA THR 3 34 61.366 152.173 59.150 1.00 44.18 C \ ATOM 83486 CA GLY 3 35 64.788 151.587 57.620 1.00 41.20 C \ ATOM 83487 CA LYS 3 36 64.421 148.397 55.613 1.00 39.91 C \ ATOM 83488 CA SER 3 37 63.039 146.878 52.351 1.00 41.53 C \ ATOM 83489 CA GLY 3 38 61.268 149.353 50.086 1.00 38.75 C \ ATOM 83490 CA ASP 3 39 58.821 146.611 49.175 1.00 36.39 C \ ATOM 83491 CA GLU 3 40 58.165 145.941 52.869 1.00 38.61 C \ ATOM 83492 CA ILE 3 41 57.680 149.650 53.389 1.00 33.53 C \ ATOM 83493 CA ARG 3 42 54.962 149.316 50.749 1.00 34.11 C \ ATOM 83494 CA GLY 3 43 53.530 145.962 51.742 1.00 40.18 C \ ATOM 83495 CA LYS 3 44 51.841 148.036 54.467 1.00 39.33 C \ ATOM 83496 CA GLY 3 45 48.740 148.648 52.326 1.00 39.97 C \ ATOM 83497 CA LYS 3 46 45.649 146.914 53.742 1.00 38.39 C \ ATOM 83498 CA GLY 3 47 44.503 143.399 54.634 1.00 35.23 C \ ATOM 83499 CA PHE 3 48 41.527 141.395 55.879 1.00 36.99 C \ ATOM 83500 CA VAL 3 49 41.968 140.078 59.420 1.00 36.34 C \ ATOM 83501 CA LEU 3 50 41.363 136.307 59.605 1.00 37.53 C \ ATOM 83502 CA ALA 3 51 39.424 135.047 62.696 1.00 37.69 C \ ATOM 83503 CA LYS 3 52 39.580 138.334 64.622 1.00 35.86 C \ ATOM 83504 CA ALA 3 53 36.078 138.454 63.214 1.00 32.21 C \ ATOM 83505 CA GLU 3 54 33.324 138.356 65.812 1.00 31.15 C \ ATOM 83506 CA TRP 3 55 35.122 140.566 68.322 1.00 22.37 C \ ATOM 83507 CA ALA 3 56 35.935 143.161 65.701 1.00 22.85 C \ ATOM 83508 CA ARG 3 57 32.545 142.876 64.035 1.00 20.53 C \ ATOM 83509 CA MET 3 58 31.190 143.443 67.547 1.00 26.42 C \ ATOM 83510 CA LYS 3 59 33.777 146.058 68.574 1.00 35.51 C \ ATOM 83511 CA LEU 3 60 31.956 148.144 65.980 1.00 38.44 C \ ATOM 83512 CA MET 3 61 28.836 146.033 66.437 1.00 46.68 C \ ATOM 83513 CA LEU 3 62 26.881 149.265 66.468 1.00 47.22 C \ ATOM 83514 CA PRO 3 63 26.568 151.224 63.165 1.00 47.69 C \ ATOM 83515 CA ARG 3 64 29.401 149.549 61.142 1.00 43.56 C \ TER 83516 ARG 3 64 \ END \ \ ""","d2zjr31") cmd.color("white" ,"d2zjr31") cmd.zoom("d2zjr31", animate=-1) cmd.orient(selection="d2zjr31", state=0, animate=0) cmd.select("d2zjr31_aln","/d2zjr31//3/2 or /d2zjr31//3/3 or /d2zjr31//3/4 or /d2zjr31//3/5 or /d2zjr31//3/6 or /d2zjr31//3/7 or /d2zjr31//3/8 or /d2zjr31//3/9 or /d2zjr31//3/10 or /d2zjr31//3/11 or /d2zjr31//3/12 or /d2zjr31//3/13 or /d2zjr31//3/14 or /d2zjr31//3/15 or /d2zjr31//3/16 or /d2zjr31//3/17 or /d2zjr31//3/18 or /d2zjr31//3/19 or /d2zjr31//3/20 or /d2zjr31//3/21 or /d2zjr31//3/22 or /d2zjr31//3/23 or /d2zjr31//3/24 or /d2zjr31//3/25 or /d2zjr31//3/26 or /d2zjr31//3/27 or /d2zjr31//3/28 or /d2zjr31//3/29 or /d2zjr31//3/30 or /d2zjr31//3/31 or /d2zjr31//3/32 or /d2zjr31//3/33 or /d2zjr31//3/34 or /d2zjr31//3/35 or /d2zjr31//3/36 or /d2zjr31//3/37 or /d2zjr31//3/38 or /d2zjr31//3/39 or /d2zjr31//3/40 or /d2zjr31//3/41 or /d2zjr31//3/42 or /d2zjr31//3/43 or /d2zjr31//3/44 or /d2zjr31//3/45 or /d2zjr31//3/46 or /d2zjr31//3/47 or /d2zjr31//3/48 or /d2zjr31//3/49 or /d2zjr31//3/50 or /d2zjr31//3/51 or /d2zjr31//3/52 or /d2zjr31//3/53 or /d2zjr31//3/54 or /d2zjr31//3/55 or /d2zjr31//3/56 or /d2zjr31//3/57 or /d2zjr31//3/58 or /d2zjr31//3/59 or /d2zjr31//3/60 or /d2zjr31//3/61 or /d2zjr31//3/62 or /d2zjr31//3/63") cmd.spectrum(expression="count",selection="d2zjr31_aln",byres=2) cmd.disable("d2zjr31_aln") cmd.as("cartoon" ,"d2zjr31")